Your job contains 1 sequence.
>psy8529
MEYGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMI
VDLDAHQFSDYYFPSAHSIKRKRKVEFLKERKALEDEITSEPQESVVTRPWPIVYRPEYN
VHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTE
KYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINI
GGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI
FIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLL
NDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL
ISRPYNIWFIYYTSKT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8529
(436 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q96DB2 - symbol:HDAC11 "Histone deacetylase 11"... 909 3.5e-91 1
UNIPROTKB|Q9GKU5 - symbol:HDAC11 "Histone deacetylase 11"... 908 4.5e-91 1
RGD|1311706 - symbol:Hdac11 "histone deacetylase 11" spec... 907 5.7e-91 1
MGI|MGI:2385252 - symbol:Hdac11 "histone deacetylase 11" ... 906 7.3e-91 1
UNIPROTKB|F1NYW6 - symbol:HDAC11 "Uncharacterized protein... 906 7.3e-91 1
UNIPROTKB|F1MWX4 - symbol:HDAC11 "Uncharacterized protein... 892 2.2e-89 1
ZFIN|ZDB-GENE-040704-7 - symbol:hdac11 "histone deacetyla... 866 1.3e-86 1
UNIPROTKB|E7ETT9 - symbol:HDAC11 "Histone deacetylase 11"... 849 8.0e-85 1
UNIPROTKB|F1PSI9 - symbol:HDAC11 "Uncharacterized protein... 837 1.5e-83 1
UNIPROTKB|F1SPG6 - symbol:F1SPG6 "Uncharacterized protein... 833 3.9e-83 1
FB|FBgn0051119 - symbol:HdacX "Histone deacetylase X" spe... 773 9.0e-77 1
TAIR|locus:2180657 - symbol:HDA2 "AT5G26040" species:3702... 762 1.3e-75 1
UNIPROTKB|I3LTU6 - symbol:LOC100738481 "Uncharacterized p... 723 1.8e-71 1
WB|WBGene00007953 - symbol:hda-11 species:6239 "Caenorhab... 641 8.8e-63 1
UNIPROTKB|Q18477 - symbol:hda-11 "Protein HDA-11" species... 641 8.8e-63 1
UNIPROTKB|B5MCQ6 - symbol:HDAC11 "Histone deacetylase 11"... 447 1.6e-61 2
UNIPROTKB|B5MCU6 - symbol:HDAC11 "Histone deacetylase 11"... 390 8.8e-55 2
UNIPROTKB|B5MCV5 - symbol:HDAC11 "Histone deacetylase 11"... 543 2.1e-52 1
UNIPROTKB|C9JEC8 - symbol:HDAC11 "Histone deacetylase 11"... 506 1.8e-48 1
UNIPROTKB|C9J2I7 - symbol:HDAC11 "Histone deacetylase 11"... 468 1.9e-44 1
UNIPROTKB|F5H6R5 - symbol:HDAC11 "Histone deacetylase 11"... 349 7.7e-32 1
UNIPROTKB|B5MCS3 - symbol:HDAC11 "Histone deacetylase 11"... 348 9.8e-32 1
UNIPROTKB|Q47YS1 - symbol:CPS_3373 "Histone deacetylase f... 323 4.4e-29 1
TIGR_CMR|CPS_3373 - symbol:CPS_3373 "histone deacetylase ... 323 4.4e-29 1
UNIPROTKB|Q8EFZ9 - symbol:SO_1815 "Histone deacetylase su... 298 1.9e-26 1
TIGR_CMR|SO_1815 - symbol:SO_1815 "histone deacetylase/Ac... 298 1.9e-26 1
UNIPROTKB|Q48DS3 - symbol:PSPPH_4352 "Histone deacetylase... 265 1.4e-22 1
UNIPROTKB|Q4K5L2 - symbol:PFL_5403 "Histone deacetylase f... 265 1.4e-22 1
UNIPROTKB|Q9KQF6 - symbol:VC_2042 "Histone deacetylase/Ac... 248 1.1e-20 1
TIGR_CMR|VC_2042 - symbol:VC_2042 "histone deacetylase/Ac... 248 1.1e-20 1
UNIPROTKB|Q658J9 - symbol:DKFZp434L0312 "Histone deacetyl... 243 4.2e-20 1
UNIPROTKB|C9JMH0 - symbol:HDAC11 "Histone deacetylase 11"... 236 2.5e-19 1
UNIPROTKB|C9J528 - symbol:HDAC11 "Histone deacetylase 11"... 214 6.7e-17 1
UNIPROTKB|C9JBI4 - symbol:HDAC11 "Histone deacetylase 11"... 194 1.1e-14 1
UNIPROTKB|B5MC52 - symbol:HDAC11 "Histone deacetylase 11"... 193 1.4e-14 1
UNIPROTKB|Q81KS2 - symbol:acuC "Acetoin utilization prote... 202 1.6e-13 1
TIGR_CMR|BA_4918 - symbol:BA_4918 "acetoin utilization pr... 202 1.6e-13 1
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 185 1.4e-11 1
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/... 185 1.4e-11 1
TIGR_CMR|SPO_2177 - symbol:SPO_2177 "acetoin utilization ... 175 1.6e-10 1
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote... 175 1.8e-10 1
TIGR_CMR|CHY_0174 - symbol:CHY_0174 "acetoin utilization ... 175 1.8e-10 1
UNIPROTKB|P56519 - symbol:HDAC2 "Histone deacetylase 2" s... 177 1.9e-10 1
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl... 175 2.1e-10 1
TAIR|locus:2162017 - symbol:HDA6 "histone deacetylase 6" ... 174 3.8e-10 1
UNIPROTKB|J9P9H5 - symbol:HDAC2 "Histone deacetylase" spe... 171 7.7e-10 1
UNIPROTKB|B3KRS5 - symbol:HDAC2 "Histone deacetylase" spe... 171 7.7e-10 1
UNIPROTKB|F1NM39 - symbol:HDAC2 "Histone deacetylase" spe... 171 8.8e-10 1
UNIPROTKB|F1PR63 - symbol:HDAC2 "Histone deacetylase" spe... 171 8.8e-10 1
UNIPROTKB|Q92769 - symbol:HDAC2 "Histone deacetylase 2" s... 171 8.8e-10 1
MGI|MGI:1097691 - symbol:Hdac2 "histone deacetylase 2" sp... 171 8.8e-10 1
CGD|CAL0005608 - symbol:RPD31 species:5476 "Candida albic... 172 9.1e-10 1
UNIPROTKB|Q5ADP0 - symbol:RPD31 "Potential Sin3.Rpd3 hist... 172 9.1e-10 1
UNIPROTKB|F1RZK8 - symbol:HDAC2 "Histone deacetylase" spe... 171 1.1e-09 1
UNIPROTKB|J3KPW7 - symbol:HDAC2 "Histone deacetylase 2" s... 171 1.2e-09 1
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 140 1.4e-09 2
SGD|S000005274 - symbol:RPD3 "Histone deacetylase" specie... 167 1.9e-09 1
CGD|CAL0005111 - symbol:RPD3 species:5476 "Candida albica... 166 3.0e-09 1
UNIPROTKB|Q5A209 - symbol:RPD3 "Histone deacetylase" spec... 166 3.0e-09 1
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla... 166 3.0e-09 1
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac... 166 3.2e-09 1
WB|WBGene00001835 - symbol:hda-2 species:6239 "Caenorhabd... 166 3.4e-09 1
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac... 164 3.9e-09 1
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica... 163 5.9e-09 1
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec... 163 5.9e-09 1
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s... 162 8.5e-09 1
WB|WBGene00001838 - symbol:hda-10 species:6239 "Caenorhab... 161 1.2e-08 1
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s... 160 1.4e-08 1
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s... 160 1.4e-08 1
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe... 160 1.4e-08 1
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s... 160 1.4e-08 1
FB|FBgn0025825 - symbol:Hdac3 "Histone deacetylase 3" spe... 159 1.5e-08 1
UNIPROTKB|I3LG31 - symbol:LOC100622482 "Histone deacetyla... 159 1.9e-08 1
UNIPROTKB|F1SV89 - symbol:LOC100521667 "Histone deacetyla... 154 4.4e-08 1
UNIPROTKB|B5MD06 - symbol:HDAC11 "Histone deacetylase 11,... 133 4.5e-08 1
FB|FBgn0015805 - symbol:Rpd3 "Rpd3" species:7227 "Drosoph... 158 5.3e-08 2
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie... 134 5.9e-08 2
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe... 154 6.6e-08 1
UNIPROTKB|E2R692 - symbol:HDAC1 "Uncharacterized protein"... 154 6.7e-08 1
UNIPROTKB|J9NUI0 - symbol:HDAC1 "Histone deacetylase" spe... 154 6.7e-08 1
ZFIN|ZDB-GENE-040426-847 - symbol:hdac3 "histone deacetyl... 153 6.8e-08 1
UNIPROTKB|P56520 - symbol:HDAC3 "Histone deacetylase 3" s... 152 8.7e-08 1
UNIPROTKB|E7EVA8 - symbol:HDAC8 "Histone deacetylase 8" s... 132 9.8e-08 2
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe... 138 1.1e-07 2
TAIR|locus:2120948 - symbol:HD1 "AT4G38130" species:3702 ... 152 1.2e-07 1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp... 134 1.2e-07 2
UNIPROTKB|F1NH59 - symbol:HDAC3 "Histone deacetylase" spe... 150 1.5e-07 1
UNIPROTKB|Q9BY41 - symbol:HDAC8 "Histone deacetylase 8" s... 134 1.5e-07 2
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 110 1.8e-07 3
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 110 1.8e-07 3
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 110 1.8e-07 3
UNIPROTKB|P56518 - symbol:HDAC1 "Histone deacetylase 1" s... 150 2.4e-07 1
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd... 148 2.8e-07 1
UNIPROTKB|J9P5B2 - symbol:HDAC8 "Histone deacetylase" spe... 128 3.1e-07 2
ASPGD|ASPL0000073195 - symbol:rpdA species:162425 "Emeric... 150 3.2e-07 1
WB|WBGene00001834 - symbol:hda-1 species:6239 "Caenorhabd... 147 3.6e-07 1
UNIPROTKB|O17695 - symbol:hda-1 "Histone deacetylase 1" s... 147 3.6e-07 1
MGI|MGI:1343091 - symbol:Hdac3 "histone deacetylase 3" sp... 146 4.0e-07 1
UNIPROTKB|E2R792 - symbol:HDAC3 "Histone deacetylase" spe... 146 4.1e-07 1
UNIPROTKB|O15379 - symbol:HDAC3 "Histone deacetylase 3" s... 146 4.1e-07 1
WARNING: Descriptions of 82 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q96DB2 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
Length = 347
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 177/330 (53%), Positives = 234/330 (70%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + N+L E K +
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL--------KEEKLL 55
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMR 218
+ ++E +E SEE LL+ HT +YL LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R
Sbjct: 56 SDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLR 115
Query: 219 YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTA 277
GGT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A
Sbjct: 116 TQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRA 175
Query: 278 MIVDLDAHQGNGYEKDFMNETRIFIMETCITSK------AKEAIRCRIELAPYTEDQHYL 331
I+DLDAHQGNG+E+DFM++ R++IM+ AK+AIR ++EL TED YL
Sbjct: 176 TIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYL 235
Query: 332 EKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVP 391
+K+E +++SL+ PD++VYNAGTD+L D LG L+ISP GI++RDELVF R RRVP
Sbjct: 236 DKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVP 295
Query: 392 IVMLTSGGYLKQTARIIADSILNLADLGLI 421
I+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 296 ILMVTSGGYQKRTARIIADSILNLFGLGLI 325
Score = 231 (86.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+D
Sbjct: 120 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIID 179
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 180 LDAHQ 184
>UNIPROTKB|Q9GKU5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
fascicularis" [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
Length = 347
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 177/330 (53%), Positives = 233/330 (70%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + N+L E K +
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL--------KEEKLL 55
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMR 218
+ ++E +E SEE LL+ HT +YL LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R
Sbjct: 56 SDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLR 115
Query: 219 YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTA 277
GGT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A
Sbjct: 116 TQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRA 175
Query: 278 MIVDLDAHQGNGYEKDFMNETRIFIMETCITSK------AKEAIRCRIELAPYTEDQHYL 331
I+DLDAHQGNG+E+DFM++ R++IM+ AK+AIR ++EL TED YL
Sbjct: 176 TIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYL 235
Query: 332 EKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVP 391
+K+E +E+SL+ PD++VYNAGTD+L D LG L+ISP GI++RDELVF R R VP
Sbjct: 236 DKVERNIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRHVP 295
Query: 392 IVMLTSGGYLKQTARIIADSILNLADLGLI 421
I+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 296 ILMVTSGGYQKRTARIIADSILNLFGLGLI 325
Score = 231 (86.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+D
Sbjct: 120 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIID 179
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 180 LDAHQ 184
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 179/331 (54%), Positives = 232/331 (70%)
Query: 104 ESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNI 163
+ V + WPIVY P YN+ F LEKLHPFD+ KW + N+L E K ++ +
Sbjct: 9 QHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL--------KEEKLLSDGML 60
Query: 164 IEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGG 223
+E +E SEE LL+ HT +YL LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R GG
Sbjct: 61 VEAREASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGG 120
Query: 224 TLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVDL 282
T+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+DL
Sbjct: 121 TIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDL 180
Query: 283 DAHQGNGYEKDFMNETRIFIMETCITSK------AKEAIRCRIELAPYTEDQHYLEKIEA 336
DAHQGNG+E+DFM + R++IM+ AKEAIR ++EL TED+ YLEK+E
Sbjct: 181 DAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVER 240
Query: 337 GLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLT 396
+ RSL+ PD++VYNAGTDVL D LG L+ISP GI++RDE+VF R +PI+M+T
Sbjct: 241 NVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVT 300
Query: 397 SGGYLKQTARIIADSILNLADLGLISR--PY 425
SGGY K+TARIIADSILNL DLGLI PY
Sbjct: 301 SGGYQKRTARIIADSILNLHDLGLIGPEFPY 331
Score = 231 (86.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+D
Sbjct: 120 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIID 179
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 180 LDAHQ 184
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
Identities = 177/325 (54%), Positives = 230/325 (70%)
Query: 104 ESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNI 163
+ V + WPIVY P YN+ F LEKLHPFD+ KW + N+L E K ++ +
Sbjct: 9 QHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL--------KEEKLLSDGML 60
Query: 164 IEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGG 223
+E +E SEE LL+ HT +YL LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R GG
Sbjct: 61 VEAREASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGG 120
Query: 224 TLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVDL 282
T+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+DL
Sbjct: 121 TIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDL 180
Query: 283 DAHQGNGYEKDFMNETRIFIMETCITSK------AKEAIRCRIELAPYTEDQHYLEKIEA 336
DAHQGNG+E+DFM + R++IM+ AKEAIR ++EL TED+ YLEK+E
Sbjct: 181 DAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVER 240
Query: 337 GLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLT 396
+ RSL+ PD++VYNAGTDVL D LG L+ISP GI++RDE+VF R +PI+M+T
Sbjct: 241 NVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVT 300
Query: 397 SGGYLKQTARIIADSILNLADLGLI 421
SGGY K+TARIIADSILNL DLGLI
Sbjct: 301 SGGYQKRTARIIADSILNLHDLGLI 325
Score = 231 (86.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+D
Sbjct: 120 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIID 179
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 180 LDAHQ 184
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 906 (324.0 bits), Expect = 7.3e-91, P = 7.3e-91
Identities = 179/331 (54%), Positives = 233/331 (70%)
Query: 100 SEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFIT 159
+E E V WPIVY P+YN+ F LEKLHPFD+ KW + N+L E K I
Sbjct: 4 TELYEGVPPTCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFL--------KEEKLIG 55
Query: 160 QDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRY 219
D I++ +E ++E LL+ HT +YL LKWSF VA I+E+ P++ +PN+ VQ+ L+P+R
Sbjct: 56 DDLIVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVLFLPNFLVQRKVLKPLRT 115
Query: 220 HVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAM 278
GGT+ AG LA+ RGW+IN+GGGFHH S KGGGFCAYADI+L +K LF+ +S A
Sbjct: 116 QTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKAT 175
Query: 279 IVDLDAHQGNGYEKDFMNETRIFIMETCIT------SKAKEAIRCRIELAPYTEDQHYLE 332
I+DLDAHQGNG+E+DFMN+ R++IM+ AK AI+ ++EL TED YL+
Sbjct: 176 IIDLDAHQGNGHERDFMNDHRVYIMDAYNRYIYPGDGFAKRAIKRKVELEWGTEDTEYLQ 235
Query: 333 KIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPI 392
K+ +E +L PDIIVYNAGTD+L DPLG LAISPQGI++RDE+VF AR R +PI
Sbjct: 236 KVHTHVEGALNELKPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFKAARSRGIPI 295
Query: 393 VMLTSGGYLKQTARIIADSILNLADLGLISR 423
+M+TSGGY K+TARIIADSILNL +LGLI +
Sbjct: 296 LMVTSGGYQKRTARIIADSILNLHNLGLIDK 326
Score = 229 (85.7 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 42/65 (64%), Positives = 51/65 (78%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S KGGGFCAYADI+L +K LF+ +S A I+D
Sbjct: 119 GTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATIID 178
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 179 LDAHQ 183
>UNIPROTKB|F1MWX4 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
Length = 386
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 175/318 (55%), Positives = 227/318 (71%)
Query: 111 WPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVS 170
WPIVY P YN+ F LEKLHPFD+ KW + + L E K ++ ++E +E S
Sbjct: 15 WPIVYSPRYNITFLGLEKLHPFDAGKWGKVISLL--------KEEKLLSDSMLVEAREAS 66
Query: 171 EEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFL 230
+E LL+ HT +YL LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R GGT+ AG L
Sbjct: 67 DEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKL 126
Query: 231 ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVDLDAHQGNG 289
A+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF + IS A IVDLDAHQGNG
Sbjct: 127 AVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQGNG 186
Query: 290 YEKDFMNETRIFIMETCITSK------AKEAIRCRIELAPYTEDQHYLEKIEAGLERSLR 343
+E+DFM + R++IM+ AK+AIR ++EL TED YL+K+E LE++L+
Sbjct: 187 HERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLQKVERNLEKALQ 246
Query: 344 SFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQ 403
PDI+VYNAGTD+L D LG LAISPQG+++RDELVF R R++PI+M+TSGGY K+
Sbjct: 247 EHRPDIVVYNAGTDILEGDRLGGLAISPQGVVKRDELVFRIVRGRQLPILMVTSGGYQKR 306
Query: 404 TARIIADSILNLADLGLI 421
TARIIADSILNL LGLI
Sbjct: 307 TARIIADSILNLYSLGLI 324
Score = 228 (85.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 43/65 (66%), Positives = 51/65 (78%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF + IS A IVD
Sbjct: 119 GTIMAGKLAVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVD 178
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 179 LDAHQ 183
>ZFIN|ZDB-GENE-040704-7 [details] [associations]
symbol:hdac11 "histone deacetylase 11" species:7955
"Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
Length = 366
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 172/317 (54%), Positives = 224/317 (70%)
Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
PIVY PEYN+ F LEKLHPFD+ KW + +L E +FIT + I+ +E SE
Sbjct: 28 PIVYSPEYNITFMGLEKLHPFDAGKWGKVIRFL--------KEEQFITDEIIVLAREASE 79
Query: 172 EQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLA 231
LL+ HT +YL LKWS VA I+E+ PL+ +PN+ VQ+ LRP+R GGT+ AG LA
Sbjct: 80 ADLLVVHTARYLNRLKWSLVVATITEIPPLLFLPNFLVQRKVLRPLRTQTGGTIMAGKLA 139
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVDLDAHQGNGY 290
+ RGW+IN+GGGFHH S KGGGFCAYADI+L +K LF+ + +++A I+DLDAHQGNG+
Sbjct: 140 IDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVASATIIDLDAHQGNGH 199
Query: 291 EKDFMNETRIFIMETCIT------SKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRS 344
E+DF+ + R++IM+ AK AI+ ++EL TED YL+K++ E +L
Sbjct: 200 ERDFLEDRRVYIMDVYNRHIYPGDGYAKRAIKRKVELDWGTEDSEYLQKVDLHSEGALNE 259
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQT 404
PDII+YNAGTD+L DPLG LAISPQGII+RDE++F AR R +PI+M+TSGGY K+T
Sbjct: 260 ARPDIIIYNAGTDILDGDPLGGLAISPQGIIKRDEIIFRAARRRGIPILMVTSGGYQKKT 319
Query: 405 ARIIADSILNLADLGLI 421
ARIIADSILNL GLI
Sbjct: 320 ARIIADSILNLHRQGLI 336
Score = 231 (86.4 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 41/65 (63%), Positives = 53/65 (81%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S KGGGFCAYADI+L +K LF+ + +++A I+D
Sbjct: 131 GTIMAGKLAIDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVASATIID 190
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 191 LDAHQ 195
>UNIPROTKB|E7ETT9 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
Uniprot:E7ETT9
Length = 319
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 166/303 (54%), Positives = 219/303 (72%)
Query: 126 LEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKS 185
LEKLHPFD+ KW + N+L E K ++ ++E +E SEE LL+ HT +YL
Sbjct: 3 LEKLHPFDAGKWGKVINFL--------KEEKLLSDSMLVEAREASEEDLLVVHTRRYLNE 54
Query: 186 LKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFH 245
LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R GGT+ AG LA+ RGW+IN+GGGFH
Sbjct: 55 LKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFH 114
Query: 246 HASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVDLDAHQGNGYEKDFMNETRIFIME 304
H S +GGGFCAYADI+L +K LF+ + IS A I+DLDAHQGNG+E+DFM++ R++IM+
Sbjct: 115 HCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMD 174
Query: 305 TCITSK------AKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDV 358
AK+AIR ++EL TED YL+K+E +++SL+ PD++VYNAGTD+
Sbjct: 175 VYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDI 234
Query: 359 LLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADL 418
L D LG L+ISP GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL L
Sbjct: 235 LEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGL 294
Query: 419 GLI 421
GLI
Sbjct: 295 GLI 297
Score = 231 (86.4 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+D
Sbjct: 92 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIID 151
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 152 LDAHQ 156
>UNIPROTKB|F1PSI9 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
Length = 319
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 163/303 (53%), Positives = 219/303 (72%)
Query: 126 LEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKS 185
LEKLHPFD+ KW + ++L E K ++ ++E +E S+E LL+ HT +YL
Sbjct: 3 LEKLHPFDAGKWGKVISFL--------KEEKLLSDGMLVEAREASDEDLLVVHTRRYLNE 54
Query: 186 LKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFH 245
LKWSF VA I+E+ P++ +PN+ VQ+ L+P+R GGT+ AG LA+ RGW+IN+GGGFH
Sbjct: 55 LKWSFAVATITEIPPVIFLPNFLVQRKVLKPLRTQTGGTIMAGKLAMERGWAINVGGGFH 114
Query: 246 HASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVDLDAHQGNGYEKDFMNETRIFIME 304
H S +GGGFCAYADI+L +K LF+ + IS A IVDLDAHQGNG+E+DFM + R++IM+
Sbjct: 115 HCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGHERDFMGDKRVYIMD 174
Query: 305 TCITSK------AKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDV 358
AK+AIR ++EL TED YL+K+E L+++L+ PD++VYNAGTD+
Sbjct: 175 VYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNLQKALQEHLPDVVVYNAGTDI 234
Query: 359 LLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADL 418
L D LG L+ISPQGI++RDELVF R R+VPI+M+TSGGY K+TARIIADSILNL +
Sbjct: 235 LEGDRLGGLSISPQGIVKRDELVFRVVRGRQVPILMVTSGGYQKRTARIIADSILNLYSV 294
Query: 419 GLI 421
GLI
Sbjct: 295 GLI 297
Score = 233 (87.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 43/65 (66%), Positives = 52/65 (80%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A IVD
Sbjct: 92 GTIMAGKLAMERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVD 151
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 152 LDAHQ 156
>UNIPROTKB|F1SPG6 [details] [associations]
symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00390000003411 EMBL:CU928273
Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
Length = 382
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 170/330 (51%), Positives = 223/330 (67%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + ++L E K +
Sbjct: 3 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFL--------KEEKLL 54
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMR 218
T ++E +E S+E LL+ HT +YL LKWSF VA I+E+ P Q+ L+P+R
Sbjct: 55 TDSMLVEAREASDEDLLVVHTRRYLNELKWSFAVATITEIPPCHLPAQLPGQRKVLKPLR 114
Query: 219 YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTA 277
++AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A
Sbjct: 115 PDRFKCVKAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRA 174
Query: 278 MIVDLDAHQGNGYEKDFMNETRIFIMETCITSK------AKEAIRCRIELAPYTEDQHYL 331
I+DLDAHQGNG+E+DFM + R++IM+ AK+AIR ++EL TED YL
Sbjct: 175 TIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWATEDDEYL 234
Query: 332 EKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVP 391
K+E LE++L+ PD++VYNAGTDVL D LG L+ISPQGI++RDELVF R +VP
Sbjct: 235 TKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSISPQGIVKRDELVFRMVRSLQVP 294
Query: 392 IVMLTSGGYLKQTARIIADSILNLADLGLI 421
I+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 295 ILMVTSGGYQKRTARIIADSILNLYGLGLI 324
Score = 222 (83.2 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 40/63 (63%), Positives = 51/63 (80%)
Query: 6 LEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVDLD 64
++AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+DLD
Sbjct: 121 VKAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLD 180
Query: 65 AHQ 67
AHQ
Sbjct: 181 AHQ 183
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 164/320 (51%), Positives = 214/320 (66%)
Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
PIV+ Y V F LE+LHPFD+ K KHI L + L + F EP E+++
Sbjct: 33 PIVFSRNYAVRFGGLERLHPFDAAKGKHIHKLLCAQL--QLDDGSFY------EPTELTK 84
Query: 172 EQLLIAHTEKYLKSLKWSFNVAAISEVCPLVA-VPNYFVQKCYLRPMRYHVGGTLEAGFL 230
+QL HT +YLKSL+WS NVA I+EV PL+A VPN ++Q+ YLRPMR+ G++ AG L
Sbjct: 85 DQLRRIHTREYLKSLRWSMNVACIAEV-PLMAFVPNRYIQRSYLRPMRFQAAGSILAGKL 143
Query: 231 ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKS--ISTAMIVDLDAHQGN 288
AL GW+IN+GGGFHH +GGGFC YADISLL+ LF+ + + MIVDLDAHQGN
Sbjct: 144 ALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGN 203
Query: 289 GYEKDFMNETRIFIME---TCITSK---AKEAIRCRIELAPYTEDQHYLEKIEAGLERSL 342
G+E+DF N ++I + + + AKE+IRC +EL YTED YL +++ L +SL
Sbjct: 204 GHERDFNNVAAVYIFDMYNAFVYPRDHVAKESIRCAVELRNYTEDGFYLRQLKRCLMQSL 263
Query: 343 RSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLK 402
F PD++VYNAGTDVL DPLG LAIS +G+I RD LVF R +P+VML SGGYLK
Sbjct: 264 AEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSGGYLK 323
Query: 403 QTARIIADSILNLADLGLIS 422
+A +I DSI+NL GL++
Sbjct: 324 ASAGVITDSIVNLRLQGLLN 343
Score = 201 (75.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/66 (59%), Positives = 48/66 (72%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKS--ISTAMIV 61
G++ AG LAL GW+IN+GGGFHH +GGGFC YADISLL+ LF+ + + MIV
Sbjct: 136 GSILAGKLALDYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIV 195
Query: 62 DLDAHQ 67
DLDAHQ
Sbjct: 196 DLDAHQ 201
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 160/346 (46%), Positives = 218/346 (63%)
Query: 86 EFLKERKALEDEITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLW 145
E L+ + L ++ + S V+ I+Y Y++ F +EKLHPFDS KW + +L
Sbjct: 53 EALRRERILNSKLYFDVPLSKVS----IIYSSSYDISFMGIEKLHPFDSSKWGRVCKFL- 107
Query: 146 KHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVP 205
V F+ + I+EP E S+ LL+ H+E YL SLK S VA I+EV P+ P
Sbjct: 108 -------VSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFP 160
Query: 206 NYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLV 265
N+ VQ+ L P R VGGT+ A LA RGW+INIGGGFHH + +GGGFCA+ADISL +
Sbjct: 161 NFLVQQKVLYPFRKQVGGTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCI 220
Query: 266 KLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETC------ITSKAKEAIRCRI 319
F IS MI+DLDAHQGNG+E D ++ R++I++ +A+ I ++
Sbjct: 221 HFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKV 280
Query: 320 ELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDE 379
E+ T YL K++ LE + R+F P++++YNAGTD+L DPLGLL ISP GI RDE
Sbjct: 281 EVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDE 340
Query: 380 LVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI-SRP 424
VF ARE+ +P+VMLTSGGY+K +AR+IADSI NL+ GLI +RP
Sbjct: 341 KVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQTRP 386
Score = 210 (79.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 39/64 (60%), Positives = 46/64 (71%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDL 63
GT+ A LA RGW+INIGGGFHH + +GGGFCA+ADISL + F IS MI+DL
Sbjct: 178 GTILAAKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDL 237
Query: 64 DAHQ 67
DAHQ
Sbjct: 238 DAHQ 241
>UNIPROTKB|I3LTU6 [details] [associations]
symbol:LOC100738481 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:FP700091
Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
Length = 275
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 140/280 (50%), Positives = 190/280 (67%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + ++L E K +
Sbjct: 3 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVISFL--------KEEKLL 54
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMR 218
T ++E +E S+E LL+ HT +YL LKWSF VA I+E+ P++ +PN+ VQ+ L+P+R
Sbjct: 55 TDSMLVEAREASDEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLKPLR 114
Query: 219 YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTA 277
GGT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A
Sbjct: 115 TQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRA 174
Query: 278 MIVDLDAHQGNGYEKDFMNETRIFIMETCITSK------AKEAIRCRIELAPYTEDQHYL 331
I+DLDAHQGNG+E+DFM + R++IM+ AK+AIR ++EL TED YL
Sbjct: 175 TIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWATEDDEYL 234
Query: 332 EKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISP 371
K+E LE++L+ PD++VYNAGTDVL D LG L+ISP
Sbjct: 235 TKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSISP 274
Score = 231 (86.4 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+D
Sbjct: 119 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIID 178
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 179 LDAHQ 183
>WB|WBGene00007953 [details] [associations]
symbol:hda-11 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 139/324 (42%), Positives = 194/324 (59%)
Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
PIVY EYNV F +E LHPFDS KW+ + +L E IT + ++EP +
Sbjct: 18 PIVYHSEYNVTAFGIEHLHPFDSSKWRRVITHL--------KEMNLITDETLVEPNLPTF 69
Query: 172 EQLLIAHTEKYLKSLKWSFNVAAISEVCPLVA-VPNYFVQKCYLRPMRYHVGGTLEAGFL 230
E+L H KYLKS++ A I E+ P V +P ++ L P+R GGT+ A L
Sbjct: 70 EELTRVHDRKYLKSVRNPIKAAQIVEI-PFVGCLPPCIIESKLLHPLRLQAGGTVLAANL 128
Query: 231 ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGY 290
AL+ GW+IN+GGGFHHAS + GGGFC YADI++ + LF K+I+ A++VDLDAHQGNG+
Sbjct: 129 ALKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGH 188
Query: 291 EKDFMNETRIFIMETCIT------SKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSL-- 342
+DF + +F+ + +A++ I + + +T D YL ++ L + L
Sbjct: 189 ARDFADNPNVFVFDVFNPYVYPHDREARQFINRAVHVNGHTTDTSYLSELRKQLAQCLID 248
Query: 343 --RSFCP--DIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSG 398
++ P D I++NAGTD LL DPLG + +SPQ II RDE+VF A+ + +PI M+TSG
Sbjct: 249 REKTTPPGFDFIMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNLAKSKGIPICMVTSG 308
Query: 399 GYLKQTARIIADSILNLADLGLIS 422
GY K A +IA SI NL LIS
Sbjct: 309 GYQKDNALLIAKSIENLQSKNLIS 332
Score = 218 (81.8 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 39/64 (60%), Positives = 51/64 (79%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDL 63
GT+ A LAL+ GW+IN+GGGFHHAS + GGGFC YADI++ + LF K+I+ A++VDL
Sbjct: 121 GTVLAANLALKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDL 180
Query: 64 DAHQ 67
DAHQ
Sbjct: 181 DAHQ 184
>UNIPROTKB|Q18477 [details] [associations]
symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 139/324 (42%), Positives = 194/324 (59%)
Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
PIVY EYNV F +E LHPFDS KW+ + +L E IT + ++EP +
Sbjct: 18 PIVYHSEYNVTAFGIEHLHPFDSSKWRRVITHL--------KEMNLITDETLVEPNLPTF 69
Query: 172 EQLLIAHTEKYLKSLKWSFNVAAISEVCPLVA-VPNYFVQKCYLRPMRYHVGGTLEAGFL 230
E+L H KYLKS++ A I E+ P V +P ++ L P+R GGT+ A L
Sbjct: 70 EELTRVHDRKYLKSVRNPIKAAQIVEI-PFVGCLPPCIIESKLLHPLRLQAGGTVLAANL 128
Query: 231 ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGY 290
AL+ GW+IN+GGGFHHAS + GGGFC YADI++ + LF K+I+ A++VDLDAHQGNG+
Sbjct: 129 ALKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGH 188
Query: 291 EKDFMNETRIFIMETCIT------SKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSL-- 342
+DF + +F+ + +A++ I + + +T D YL ++ L + L
Sbjct: 189 ARDFADNPNVFVFDVFNPYVYPHDREARQFINRAVHVNGHTTDTSYLSELRKQLAQCLID 248
Query: 343 --RSFCP--DIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSG 398
++ P D I++NAGTD LL DPLG + +SPQ II RDE+VF A+ + +PI M+TSG
Sbjct: 249 REKTTPPGFDFIMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNLAKSKGIPICMVTSG 308
Query: 399 GYLKQTARIIADSILNLADLGLIS 422
GY K A +IA SI NL LIS
Sbjct: 309 GYQKDNALLIAKSIENLQSKNLIS 332
Score = 218 (81.8 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 39/64 (60%), Positives = 51/64 (79%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDL 63
GT+ A LAL+ GW+IN+GGGFHHAS + GGGFC YADI++ + LF K+I+ A++VDL
Sbjct: 121 GTVLAANLALKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDL 180
Query: 64 DAHQ 67
DAHQ
Sbjct: 181 DAHQ 184
>UNIPROTKB|B5MCQ6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
Length = 268
Score = 447 (162.4 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 93/164 (56%), Positives = 122/164 (74%)
Query: 265 VKLLFQS-KSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCITSK------AKEAIRC 317
+K LF+ + IS A I+DLDAHQGNG+E+DFM++ R++IM+ AK+AIR
Sbjct: 83 LKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRR 142
Query: 318 RIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRR 377
++EL TED YL+K+E +++SL+ PD++VYNAGTD+L D LG L+ISP GI++R
Sbjct: 143 KVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKR 202
Query: 378 DELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 421
DELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 203 DELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 246
Score = 200 (75.5 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + N+L K E K +
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL-K-------EEKLL 55
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFN-VAAIS 196
+ ++E +E SEE LL+ HT +YL LK+ F V IS
Sbjct: 56 SDSMLVEAREASEEDLLVVHTRRYLNELKFLFERVEGIS 94
Score = 46 (21.3 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 85 VEFLKERKALEDEITSEPQES 105
+ FLKE K L D + E +E+
Sbjct: 46 INFLKEEKLLSDSMLVEAREA 66
>UNIPROTKB|B5MCU6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00790809
ProteinModelPortal:B5MCU6 STRING:B5MCU6 Ensembl:ENST00000404040
ArrayExpress:B5MCU6 Bgee:B5MCU6 Uniprot:B5MCU6
Length = 247
Score = 390 (142.3 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
Identities = 81/146 (55%), Positives = 108/146 (73%)
Query: 282 LDAHQGNGYEKDFMNETRIFIMETCITSK------AKEAIRCRIELAPYTEDQHYLEKIE 335
L+ +GNG+E+DFM++ R++IM+ AK+AIR ++EL TED YL+K+E
Sbjct: 80 LNELKGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVE 139
Query: 336 AGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVML 395
+++SL+ PD++VYNAGTD+L D LG L+ISP GI++RDELVF R RRVPI+M+
Sbjct: 140 RNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMV 199
Query: 396 TSGGYLKQTARIIADSILNLADLGLI 421
TSGGY K+TARIIADSILNL LGLI
Sbjct: 200 TSGGYQKRTARIIADSILNLFGLGLI 225
Score = 193 (73.0 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
Identities = 39/89 (43%), Positives = 53/89 (59%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + N+L K E K +
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL-K-------EEKLL 55
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
+ ++E +E SEE LL+ HT +YL LK
Sbjct: 56 SDSMLVEAREASEEDLLVVHTRRYLNELK 84
Score = 46 (21.3 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 85 VEFLKERKALEDEITSEPQES 105
+ FLKE K L D + E +E+
Sbjct: 46 INFLKEEKLLSDSMLVEAREA 66
>UNIPROTKB|B5MCV5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
Bgee:B5MCV5 Uniprot:B5MCV5
Length = 204
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 106/209 (50%), Positives = 144/209 (68%)
Query: 126 LEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKS 185
LEKLHPFD+ KW + N+L E K ++ ++E +E SEE LL+ HT +YL
Sbjct: 3 LEKLHPFDAGKWGKVINFL--------KEEKLLSDSMLVEAREASEEDLLVVHTRRYLNE 54
Query: 186 LKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFH 245
LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R GGT+ AG LA+ RGW+IN+GGGFH
Sbjct: 55 LKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFH 114
Query: 246 HASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVDLDAHQGNGYEKDFMNETRIFIME 304
H S +GGGFCAYADI+L +K LF+ + IS A I+DLDAHQGNG+E+DFM++ R++IM+
Sbjct: 115 HCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMD 174
Query: 305 TCITSK------AKEAIRCRIELAPYTED 327
AK+AIR ++EL TED
Sbjct: 175 VYNRHIYPGDRFAKQAIRRKVELEWGTED 203
Score = 231 (86.4 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+D
Sbjct: 92 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIID 151
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 152 LDAHQ 156
>UNIPROTKB|C9JEC8 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
Length = 166
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 93/172 (54%), Positives = 124/172 (72%)
Query: 126 LEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKS 185
LEKLHPFD+ KW + N+L E K ++ ++E +E SEE LL+ HT +YL
Sbjct: 3 LEKLHPFDAGKWGKVINFL--------KEEKLLSDSMLVEAREASEEDLLVVHTRRYLNE 54
Query: 186 LKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFH 245
LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R GGT+ AG LA+ RGW+IN+GGGFH
Sbjct: 55 LKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFH 114
Query: 246 HASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVDLDAHQGNGYEKDFMN 296
H S +GGGFCAYADI+L +K LF+ + IS A I+DLDAHQGNG+E+DFM+
Sbjct: 115 HCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMD 166
Score = 231 (86.4 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS-KSISTAMIVD 62
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K LF+ + IS A I+D
Sbjct: 92 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIID 151
Query: 63 LDAHQ 67
LDAHQ
Sbjct: 152 LDAHQ 156
>UNIPROTKB|C9J2I7 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879880 ProteinModelPortal:C9J2I7
STRING:C9J2I7 Ensembl:ENST00000458642 BindingDB:C9J2I7
ArrayExpress:C9J2I7 Bgee:C9J2I7 Uniprot:C9J2I7
Length = 186
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 85/168 (50%), Positives = 114/168 (67%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + N+L E K +
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL--------KEEKLL 55
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMR 218
+ ++E +E SEE LL+ HT +YL LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R
Sbjct: 56 SDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLR 115
Query: 219 YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVK 266
GGT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K
Sbjct: 116 TQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIK 163
Score = 178 (67.7 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVK 47
GT+ AG LA+ RGW+IN+GGGFHH S +GGGFCAYADI+L +K
Sbjct: 120 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIK 163
>UNIPROTKB|F5H6R5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086 IPI:IPI00790809
ProteinModelPortal:F5H6R5 SMR:F5H6R5 Ensembl:ENST00000446613
UCSC:uc011aux.2 ArrayExpress:F5H6R5 Bgee:F5H6R5 Uniprot:F5H6R5
Length = 155
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 70/111 (63%), Positives = 88/111 (79%)
Query: 311 AKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAIS 370
AK+AIR ++EL TED YL+K+E +++SL+ PD++VYNAGTD+L D LG L+IS
Sbjct: 23 AKQAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSIS 82
Query: 371 PQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 421
P GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 83 PAGIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 133
>UNIPROTKB|B5MCS3 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00878794
ProteinModelPortal:B5MCS3 STRING:B5MCS3 Ensembl:ENST00000402259
ArrayExpress:B5MCS3 Bgee:B5MCS3 Uniprot:B5MCS3
Length = 181
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 70/110 (63%), Positives = 87/110 (79%)
Query: 312 KEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISP 371
KEAIR ++EL TED YL+K+E +++SL+ PD++VYNAGTD+L D LG L+ISP
Sbjct: 50 KEAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISP 109
Query: 372 QGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 421
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 110 AGIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 159
Score = 144 (55.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + N+L K VE ++
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL-KEAIRRKVELEWG 62
Query: 159 TQDN 162
T+D+
Sbjct: 63 TEDD 66
>UNIPROTKB|Q47YS1 [details] [associations]
symbol:CPS_3373 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 90/300 (30%), Positives = 140/300 (46%)
Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
P+V+ P Y+ +L H F +K+ I N L A + + +P V+
Sbjct: 4 PLVFHPIYSQ--LELPIRHRFPIEKYVGIRNAL---------VANGVPNNWFKKPTPVNP 52
Query: 172 EQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLA 231
+ + + Y+ L N S+ + P + Q+ R + VGGT+ LA
Sbjct: 53 DNVKTVYDPTYIHQL---INNQLDSKAMRRIGFP--WSQQLIERTLTA-VGGTIMTAQLA 106
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L G S+N+ GG+HHA G GFC D+ L + Q+ +IS +I D D HQG+G
Sbjct: 107 LEYGKSLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTA 166
Query: 292 KDFMNETRIFIMETCITSK---AKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPD 348
K N +F + K+ L T D YLE ++ L ++ SF PD
Sbjct: 167 KLASNNQNVFTVSIHGEKNFPHRKQVSNLDFALPKGTTDSLYLETVDNALNKAFSSFKPD 226
Query: 349 IIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARII 408
++Y+AG D+ ND LG L IS QG++ RD+LVF + + +PI + GGY + ++
Sbjct: 227 AVIYDAGVDIHCNDDLGHLDISTQGVLARDKLVFDYCKLKGIPIAAVIGGGYQRDIEALV 286
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDL 63
GT+ LAL G S+N+ GG+HHA G GFC D+ L + Q+ +IS +I D
Sbjct: 98 GTIMTAQLALEYGKSLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDA 157
Query: 64 DAHQ 67
D HQ
Sbjct: 158 DVHQ 161
>TIGR_CMR|CPS_3373 [details] [associations]
symbol:CPS_3373 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 90/300 (30%), Positives = 140/300 (46%)
Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
P+V+ P Y+ +L H F +K+ I N L A + + +P V+
Sbjct: 4 PLVFHPIYSQ--LELPIRHRFPIEKYVGIRNAL---------VANGVPNNWFKKPTPVNP 52
Query: 172 EQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLA 231
+ + + Y+ L N S+ + P + Q+ R + VGGT+ LA
Sbjct: 53 DNVKTVYDPTYIHQL---INNQLDSKAMRRIGFP--WSQQLIERTLTA-VGGTIMTAQLA 106
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L G S+N+ GG+HHA G GFC D+ L + Q+ +IS +I D D HQG+G
Sbjct: 107 LEYGKSLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTA 166
Query: 292 KDFMNETRIFIMETCITSK---AKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPD 348
K N +F + K+ L T D YLE ++ L ++ SF PD
Sbjct: 167 KLASNNQNVFTVSIHGEKNFPHRKQVSNLDFALPKGTTDSLYLETVDNALNKAFSSFKPD 226
Query: 349 IIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARII 408
++Y+AG D+ ND LG L IS QG++ RD+LVF + + +PI + GGY + ++
Sbjct: 227 AVIYDAGVDIHCNDDLGHLDISTQGVLARDKLVFDYCKLKGIPIAAVIGGGYQRDIEALV 286
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDL 63
GT+ LAL G S+N+ GG+HHA G GFC D+ L + Q+ +IS +I D
Sbjct: 98 GTIMTAQLALEYGKSLNLTGGYHHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDA 157
Query: 64 DAHQ 67
D HQ
Sbjct: 158 DVHQ 161
>UNIPROTKB|Q8EFZ9 [details] [associations]
symbol:SO_1815 "Histone deacetylase superfamily protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 81/302 (26%), Positives = 144/302 (47%)
Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
P+VY Y+ + H F + K+ H++ YL ++ + T P ++
Sbjct: 3 PLVYHASYSKLALPIH--HRFPTTKYAHLYQYL--------LDNQLATPTQFHTPTPMTA 52
Query: 172 EQLLIAHTEKYLKS-LKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFL 230
E+++ H Y++ + + +A+ + P + + R + G +L A L
Sbjct: 53 EEIMQVHHRDYVEQFIDGTLATSALRRI----GFP--WSEALVERTLHSLAGTSLTAA-L 105
Query: 231 ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGY 290
AL+ G ++++ GG+HHA G G+C + D+ + + L + + +I D D HQG+G
Sbjct: 106 ALQTGIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGT 165
Query: 291 EKDFMNETRIFIMETCITSK-----AKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSF 345
+++ I+ I K K+ IEL T+D YL+ +E LE +R
Sbjct: 166 AT--LSQLHQGIISCSIHCKDNFPSRKQHSHYDIELVKGTDDSAYLDTVEQTLELLIRLH 223
Query: 346 CPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTA 405
PD+I+Y+AG D+ +D LG L IS QG+ +RD V AR +P+ + GGY +
Sbjct: 224 QPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLSMARAANIPVAAVIGGGYSRDAL 283
Query: 406 RI 407
++
Sbjct: 284 QL 285
>TIGR_CMR|SO_1815 [details] [associations]
symbol:SO_1815 "histone deacetylase/AcuC/AphA family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 81/302 (26%), Positives = 144/302 (47%)
Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
P+VY Y+ + H F + K+ H++ YL ++ + T P ++
Sbjct: 3 PLVYHASYSKLALPIH--HRFPTTKYAHLYQYL--------LDNQLATPTQFHTPTPMTA 52
Query: 172 EQLLIAHTEKYLKS-LKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFL 230
E+++ H Y++ + + +A+ + P + + R + G +L A L
Sbjct: 53 EEIMQVHHRDYVEQFIDGTLATSALRRI----GFP--WSEALVERTLHSLAGTSLTAA-L 105
Query: 231 ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGY 290
AL+ G ++++ GG+HHA G G+C + D+ + + L + + +I D D HQG+G
Sbjct: 106 ALQTGIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGT 165
Query: 291 EKDFMNETRIFIMETCITSK-----AKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSF 345
+++ I+ I K K+ IEL T+D YL+ +E LE +R
Sbjct: 166 AT--LSQLHQGIISCSIHCKDNFPSRKQHSHYDIELVKGTDDSAYLDTVEQTLELLIRLH 223
Query: 346 CPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTA 405
PD+I+Y+AG D+ +D LG L IS QG+ +RD V AR +P+ + GGY +
Sbjct: 224 QPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLSMARAANIPVAAVIGGGYSRDAL 283
Query: 406 RI 407
++
Sbjct: 284 QL 285
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 265 (98.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 81/294 (27%), Positives = 137/294 (46%)
Query: 112 PIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSE 171
P++Y +Y+ F H F K++ L + +YLV++ + ++ P+
Sbjct: 4 PLIYHEDYSPDF---PADHRFPMDKFR-----LLR---DYLVDSGLTSDVQLMRPELCPA 52
Query: 172 EQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLA 231
+ L +AH Y+ N E + +P + R VGG+L A
Sbjct: 53 DILALAHDPSYISRY---LNGDLSREDQRRLGLP---WSEALARRTVSAVGGSLLTAEQA 106
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G + ++ GG HHA GFC + D++++ + L QS + +I D D HQG+G
Sbjct: 107 LKHGMACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTA 166
Query: 292 KDFMN-ETRIFIMETCITS-KAKEAIR-CRIELAPYTEDQHYLEKIEAGLERSLRSFCPD 348
+ + E I + C + A++A I L D +YL ++ L L + PD
Sbjct: 167 RILADTEDAITVSLHCEKNFPARKAQSDWDIPLPMGMGDANYLNVVDDLLNYLLPFYKPD 226
Query: 349 IIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLK 402
+++Y+AG DV +D LG L ++ QG+ RDE V R +P++ + GGY K
Sbjct: 227 LVLYDAGVDVHKDDALGYLQLTDQGVANRDEAVLRHCLSRDIPVMGVIGGGYSK 280
Score = 115 (45.5 bits), Expect = 0.00060, P = 0.00060
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 4 GTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDL 63
G+L AL+ G + ++ GG HHA GFC + D++++ + L QS + +I D
Sbjct: 98 GSLLTAEQALKHGMACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDC 157
Query: 64 DAHQ 67
D HQ
Sbjct: 158 DVHQ 161
>UNIPROTKB|Q4K5L2 [details] [associations]
symbol:PFL_5403 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
KEGG:pfl:PFL_5403 PATRIC:19880291
BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
Length = 306
Score = 265 (98.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 82/297 (27%), Positives = 136/297 (45%)
Query: 110 PWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEV 169
P P++Y +Y+ F E P D F L H LV++ +++ P+
Sbjct: 2 PLPLIYHDDYSPEF-PAEHRFPMDK------FRLLRDH----LVDSGLTRDADLLRPELC 50
Query: 170 SEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGF 229
E L +AH Y++ S ++ + + +P + + R +R VGG+L A
Sbjct: 51 PAEILALAHDPAYIERYM-SGELSREDQ--RRLGLP--WSEALARRTVRA-VGGSLLAAE 104
Query: 230 LALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNG 289
AL G + ++ GG HHA GFC + D++++ L +S + +I D D HQG+G
Sbjct: 105 QALEHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDG 164
Query: 290 YEKDFMNETRIFIMETCITSKAKEAIRCR----IELAPYTEDQHYLEKIEAGLERSLRSF 345
+ + T + + K A + + I L D YL ++ L L +
Sbjct: 165 TAR-ILQHTADAVTVSLHCEKNFPARKAQSDWDIPLPMGMGDADYLNVVDDTLNYLLPLY 223
Query: 346 CPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLK 402
PD+++Y+AG DV +D LG L ++ G+ RDE V R +P+V + GGY K
Sbjct: 224 QPDLVLYDAGVDVHQDDALGYLKLTDAGVAERDERVMRHCLGRDIPVVGVIGGGYSK 280
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 57/193 (29%), Positives = 93/193 (48%)
Query: 219 YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAM 278
Y VGGT AL+ G +I++ GG+HHA G GFC + D+++ S+ +
Sbjct: 99 YSVGGTCLTVEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVL 158
Query: 279 IVDLDAHQGNGYEKDFMNETRIFIMET-CITS--KAKEAIRCRIELAPYTEDQHYLEKIE 335
I+D D H G+G I + C + K A + A T D+ +L
Sbjct: 159 IIDSDVHHGDGTATLCAERDEIITLSFHCDKNFPARKPASSMDVGYANQTGDEEFLSTFI 218
Query: 336 AGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVML 395
+E ++ PD+I+Y+AG D+ +D LG L+IS I +RD + A++ +PI +
Sbjct: 219 QVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACV 278
Query: 396 TSGGYLKQTARII 408
GGY + ++
Sbjct: 279 IGGGYREDHTALV 291
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 248 (92.4 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 57/193 (29%), Positives = 93/193 (48%)
Query: 219 YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAM 278
Y VGGT AL+ G +I++ GG+HHA G GFC + D+++ S+ +
Sbjct: 99 YSVGGTCLTVEQALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVL 158
Query: 279 IVDLDAHQGNGYEKDFMNETRIFIMET-CITS--KAKEAIRCRIELAPYTEDQHYLEKIE 335
I+D D H G+G I + C + K A + A T D+ +L
Sbjct: 159 IIDSDVHHGDGTATLCAERDEIITLSFHCDKNFPARKPASSMDVGYANQTGDEEFLSTFI 218
Query: 336 AGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVML 395
+E ++ PD+I+Y+AG D+ +D LG L+IS I +RD + A++ +PI +
Sbjct: 219 QVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACV 278
Query: 396 TSGGYLKQTARII 408
GGY + ++
Sbjct: 279 IGGGYREDHTALV 291
>UNIPROTKB|Q658J9 [details] [associations]
symbol:DKFZp434L0312 "Histone deacetylase 11" species:9606
"Homo sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CH471055 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124
UniGene:Hs.404802 HGNC:HGNC:19086 HOGENOM:HOG000140749
EMBL:AL834223 IPI:IPI00470376 STRING:Q658J9 Ensembl:ENST00000433119
UCSC:uc010heb.3 Uniprot:Q658J9
Length = 236
Score = 243 (90.6 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 46/100 (46%), Positives = 65/100 (65%)
Query: 126 LEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKS 185
LEKLHPFD+ KW + N+L E K ++ ++E +E SEE LL+ HT +YL
Sbjct: 3 LEKLHPFDAGKWGKVINFL--------KEEKLLSDSMLVEAREASEEDLLVVHTRRYLNE 54
Query: 186 LKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTL 225
LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R GGT+
Sbjct: 55 LKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTI 94
>UNIPROTKB|C9JMH0 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086 OrthoDB:EOG4PVNZV
IPI:IPI00879927 ProteinModelPortal:C9JMH0 SMR:C9JMH0 STRING:C9JMH0
Ensembl:ENST00000416248 BindingDB:C9JMH0 ArrayExpress:C9JMH0
Bgee:C9JMH0 Uniprot:C9JMH0
Length = 92
Score = 236 (88.1 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 45/98 (45%), Positives = 63/98 (64%)
Query: 126 LEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKS 185
LEKLHPFD+ KW + N+L E K ++ ++E +E SEE LL+ HT +YL
Sbjct: 3 LEKLHPFDAGKWGKVINFL--------KEEKLLSDSMLVEAREASEEDLLVVHTRRYLNE 54
Query: 186 LKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGG 223
LKWSF VA I+E+ P++ +PN+ VQ+ LRP+R GG
Sbjct: 55 LKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGG 92
>UNIPROTKB|C9J528 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00879695 ProteinModelPortal:C9J528 SMR:C9J528 STRING:C9J528
Ensembl:ENST00000418189 BindingDB:C9J528 ArrayExpress:C9J528
Bgee:C9J528 Uniprot:C9J528
Length = 107
Score = 214 (80.4 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 42/92 (45%), Positives = 56/92 (60%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + N+L K E K +
Sbjct: 23 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL-K-------EEKLL 74
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSF 190
+ ++E +E SEE LL+ HT +YL LKWSF
Sbjct: 75 SDSMLVEAREASEEDLLVVHTRRYLNELKWSF 106
>UNIPROTKB|C9JBI4 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00880085 ProteinModelPortal:C9JBI4 SMR:C9JBI4 STRING:C9JBI4
Ensembl:ENST00000434848 HOGENOM:HOG000140749 BindingDB:C9JBI4
ArrayExpress:C9JBI4 Bgee:C9JBI4 Uniprot:C9JBI4
Length = 168
Score = 194 (73.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + N+L K E K +
Sbjct: 23 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL-K-------EEKLL 74
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVP 205
+ ++E +E SEE LL+ HT +YL LK + A + V +VP
Sbjct: 75 SDSMLVEAREASEEDLLVVHTRRYLNELKGVASTTAPATVAG-ASVP 120
>UNIPROTKB|B5MC52 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00877992 ProteinModelPortal:B5MC52 SMR:B5MC52 STRING:B5MC52
PRIDE:B5MC52 Ensembl:ENST00000404548 HOGENOM:HOG000074071
HOVERGEN:HBG104774 ArrayExpress:B5MC52 Bgee:B5MC52 Uniprot:B5MC52
Length = 146
Score = 193 (73.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 39/89 (43%), Positives = 53/89 (59%)
Query: 99 TSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFI 158
T++ + V WPIVY P YN+ F LEKLHPFD+ KW + N+L K E K +
Sbjct: 4 TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFL-K-------EEKLL 55
Query: 159 TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
+ ++E +E SEE LL+ HT +YL LK
Sbjct: 56 SDSMLVEAREASEEDLLVVHTRRYLNELK 84
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 202 (76.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 70/254 (27%), Positives = 115/254 (45%)
Query: 139 HIFNYLWKHI-FNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSF------N 191
H FN L + ++ L + FI+ II P+ ++E++ HTE+Y+ ++K + +
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 192 VAAI----SEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEA--GFLALRRGWSINIGGGFH 245
+A +E P+ PN L VGGTL A L+ + ++N+GGG H
Sbjct: 80 IAMTYGLGTEDTPMF--PNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLH 131
Query: 246 HASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMET 305
H K GFC Y D S+ +K + Q K + +D DAH G+G + F ++ + +
Sbjct: 132 HGFRGKASGFCIYNDSSIAMKYI-QKKYGLRVLYIDTDAHHGDGVQWSFYDDPNVCTISL 190
Query: 306 CITSK----AKEAIRCR-----------IELAPYTEDQHYLEKIEAGLERSLRSFCPDII 350
T + A+ R + L +TED+ +L+ ++ F PDII
Sbjct: 191 HETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDII 250
Query: 351 VYNAGTDVLLNDPL 364
+ G D DPL
Sbjct: 251 LTQNGADAHYYDPL 264
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 202 (76.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 70/254 (27%), Positives = 115/254 (45%)
Query: 139 HIFNYLWKHI-FNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSF------N 191
H FN L + ++ L + FI+ II P+ ++E++ HTE+Y+ ++K + +
Sbjct: 20 HPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKS 79
Query: 192 VAAI----SEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEA--GFLALRRGWSINIGGGFH 245
+A +E P+ PN L VGGTL A L+ + ++N+GGG H
Sbjct: 80 IAMTYGLGTEDTPMF--PNMHEASALL------VGGTLTAVDAVLSGKVKHALNLGGGLH 131
Query: 246 HASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMET 305
H K GFC Y D S+ +K + Q K + +D DAH G+G + F ++ + +
Sbjct: 132 HGFRGKASGFCIYNDSSIAMKYI-QKKYGLRVLYIDTDAHHGDGVQWSFYDDPNVCTISL 190
Query: 306 CITSK----AKEAIRCR-----------IELAPYTEDQHYLEKIEAGLERSLRSFCPDII 350
T + A+ R + L +TED+ +L+ ++ F PDII
Sbjct: 191 HETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDII 250
Query: 351 VYNAGTDVLLNDPL 364
+ G D DPL
Sbjct: 251 LTQNGADAHYYDPL 264
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 73/278 (26%), Positives = 119/278 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLK-WSFNVAAISEV-CPLVAVPNYFVQKCYLRPMRYH 220
I++ +EE LL H YL L+ +S + A ++ L + N + Y R
Sbjct: 49 ILDCPRAAEEALLTFHAPDYLDRLREFSESDDARADFRYGLGDLDNPVFRGLY-DWARLG 107
Query: 221 VGGTLEAGFLALRRGWSI--NIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAM 278
GGT+EA L G+ I N+ GG+HHA K GF D + + LL + K + A
Sbjct: 108 AGGTIEAARLVAEEGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLE-KGLRVAY 166
Query: 279 IVDLDAHQGNGYEKDFMNETRI-----------FIMETCITSK----AKEAIRCRIELAP 323
+ D+DAH G+G ++ F + R+ F T + A I L
Sbjct: 167 L-DIDAHHGDGVQEAFYDTDRVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVA 225
Query: 324 YTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFM 383
+ +D +++ + L ++ PD++V G D DPL L ++ +
Sbjct: 226 HADDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYT----YILR 281
Query: 384 KARERRVPIVMLTSGGY-LKQTARI--IADSILNLADL 418
K + +P V + GGY L AR +A ++N +L
Sbjct: 282 KLKALGIPWVAVGGGGYNLVNVARAWTLAWGVMNGVEL 319
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 73/278 (26%), Positives = 119/278 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLK-WSFNVAAISEV-CPLVAVPNYFVQKCYLRPMRYH 220
I++ +EE LL H YL L+ +S + A ++ L + N + Y R
Sbjct: 49 ILDCPRAAEEALLTFHAPDYLDRLREFSESDDARADFRYGLGDLDNPVFRGLY-DWARLG 107
Query: 221 VGGTLEAGFLALRRGWSI--NIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAM 278
GGT+EA L G+ I N+ GG+HHA K GF D + + LL + K + A
Sbjct: 108 AGGTIEAARLVAEEGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLE-KGLRVAY 166
Query: 279 IVDLDAHQGNGYEKDFMNETRI-----------FIMETCITSK----AKEAIRCRIELAP 323
+ D+DAH G+G ++ F + R+ F T + A I L
Sbjct: 167 L-DIDAHHGDGVQEAFYDTDRVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVA 225
Query: 324 YTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFM 383
+ +D +++ + L ++ PD++V G D DPL L ++ +
Sbjct: 226 HADDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYT----YILR 281
Query: 384 KARERRVPIVMLTSGGY-LKQTARI--IADSILNLADL 418
K + +P V + GGY L AR +A ++N +L
Sbjct: 282 KLKALGIPWVAVGGGGYNLVNVARAWTLAWGVMNGVEL 319
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 68/236 (28%), Positives = 101/236 (42%)
Query: 178 HTEKYLKSLKWSFNVAAISEVCP----LVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALR 233
HT Y+ +L+ + A+SE L +PN + Y RP GG+L A L R
Sbjct: 57 HTPDYIAALQQAEAEQAVSEETRARHGLGTLPNPVFAEMYRRPATA-AGGSLLAAELVAR 115
Query: 234 RGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKD 293
N GGG HH + GGFC Y + +L L Q + VD+DAH +G
Sbjct: 116 GHRVFNPGGGTHHGFADRAGGFC-YLNDPVLAILALQRLGCARVAYVDIDAHHCDGVASA 174
Query: 294 FM-NET--RIFIMETC---ITSKAKE---AIRCRIELAPYTEDQHYLEKIEAGLERSLRS 344
F ++T I I E T ++ + +A D Y ++ + ++
Sbjct: 175 FQGSQTVRMISIHEARRWPFTGALEDDAGGAALNLPVARDLNDSAYALILDRLILPAVAG 234
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F PD +V G D + DPL LA+S RD + + A R +++L GGY
Sbjct: 235 FRPDAVVLQCGADAVAEDPLSRLALS--NCAHRDTVRALAALCPR--LLVLGGGGY 286
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 52/145 (35%), Positives = 70/145 (48%)
Query: 239 NIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNET 298
NI GG HHA GFC Y D+++ + F+ K + A VDLDAH G+G + F ++
Sbjct: 126 NIAGGLHHALRDAASGFCIYNDLAVAIAK-FREKGLKVAY-VDLDAHHGDGVQWLFYSDP 183
Query: 299 RIF---IMET---------CITSKAKEAI---RCRIELAPYTEDQHYLEKIEAGLERSLR 343
+ I ET IT + A + I L PYTED +L +E + +R
Sbjct: 184 GVLTISIHETGRYLFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIR 243
Query: 344 SFCPDIIVYNAGTDVLLNDPLGLLA 368
F PDI+V G D DPL LA
Sbjct: 244 KFKPDILVTQHGCDSHRFDPLTHLA 268
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 52/145 (35%), Positives = 70/145 (48%)
Query: 239 NIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNET 298
NI GG HHA GFC Y D+++ + F+ K + A VDLDAH G+G + F ++
Sbjct: 126 NIAGGLHHALRDAASGFCIYNDLAVAIAK-FREKGLKVAY-VDLDAHHGDGVQWLFYSDP 183
Query: 299 RIF---IMET---------CITSKAKEAI---RCRIELAPYTEDQHYLEKIEAGLERSLR 343
+ I ET IT + A + I L PYTED +L +E + +R
Sbjct: 184 GVLTISIHETGRYLFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIR 243
Query: 344 SFCPDIIVYNAGTDVLLNDPLGLLA 368
F PDI+V G D DPL LA
Sbjct: 244 KFKPDILVTQHGCDSHRFDPLTHLA 268
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 71/307 (23%), Positives = 130/307 (42%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 41 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 98
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 99 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 157
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIF-IMETCI------TSKAKEA 314
L + L K + +D+D H G+G E+ F R+ + E + T ++
Sbjct: 158 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSEVSMVNNFPGTGDLRDI 215
Query: 315 -------IRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
+ +D+ Y + + + + + + P +V G D L D LG
Sbjct: 216 GAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E+V + +P++ML GGY ++ AR D + + PY
Sbjct: 276 NLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPY 331
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 332 NDYFEYF 338
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 175 (66.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 75/311 (24%), Positives = 125/311 (40%)
Query: 148 IFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNY 207
+ N +V + N+I P + + HT++Y++ L W + + P N
Sbjct: 35 VHNLVVNYNLYEKLNVITPVRATRNDMTRCHTDEYIEFL-WRVTPDTMEKFQPHQLKFNV 93
Query: 208 FVQKCYLRPMRYH-----VGGTLEAGFLALRRG---WSINIGGGFHHASETKGGGFCAYA 259
C + Y GG++ A L G +IN GG HHA + + GFC
Sbjct: 94 G-DDCPVFDGLYEFCSISAGGSIGAA-QELNSGNAEIAINWAGGLHHAKKREASGFCYVN 151
Query: 260 DISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIF----------------IM 303
DI+L L K + +D+D H G+G E+ F R+ I
Sbjct: 152 DIALAALELL--KYHQRVLYIDIDVHHGDGVEEFFYTTDRVMTCSFHKFGEYFPGTGHIK 209
Query: 304 ETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDP 363
+T I + A+ + L +D+ Y + + ++ F P+ ++ GTD L D
Sbjct: 210 DTGIGTGKNYAVN--VPLRDGIDDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDR 267
Query: 364 LGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLIS 422
LG +S +G + V + +P++ + GGY ++ AR+ LA L
Sbjct: 268 LGCFNLSMKGHSMCVDFV----KSFNLPMICVGGGGYTVRNVARVWTYETGLLAGEELDE 323
Query: 423 R-PYNIWFIYY 432
PYN + YY
Sbjct: 324 NLPYNDYLQYY 334
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 174 (66.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 61/234 (26%), Positives = 105/234 (44%)
Query: 218 RYHVGGTLEAGFLALRRGW--SINIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSI 274
R GG++ A R+ +IN GGG HHA +++ GFC DI L +++LL K
Sbjct: 123 RASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELL---KMF 179
Query: 275 STAMIVDLDAHQGNGYEKDFMNETRI----------FIMETC----ITSKAKEAIRCRIE 320
+ +D+D H G+G E+ F R+ F T + ++ + +
Sbjct: 180 KRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVP 239
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDEL 380
L +D+ + +++ + + P+ +V G D L D LG +S +G D L
Sbjct: 240 LNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKG--HADCL 297
Query: 381 VFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWFIYY 432
F+ R VP+++L GGY ++ AR + ++ PYN +F Y+
Sbjct: 298 RFL--RSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYF 349
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 171 (65.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 11 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 68
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 69 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 127
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TCI 307
L + L K + +D+D H G+G E+ F R+ + I
Sbjct: 128 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 185
Query: 308 TSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
+ + + +D+ Y + + + + + + P +V G D L D LG
Sbjct: 186 GAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 245
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E+V + +P++ML GGY ++ AR D + + PY
Sbjct: 246 NLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPY 301
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 302 NDYFEYF 308
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 171 (65.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 11 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 68
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 69 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 127
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TCI 307
L + L K + +D+D H G+G E+ F R+ + I
Sbjct: 128 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 185
Query: 308 TSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
+ + + +D+ Y + + + + + + P +V G D L D LG
Sbjct: 186 GAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 245
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E+V + +P++ML GGY ++ AR D + + PY
Sbjct: 246 NLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPY 301
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 302 NDYFEYF 308
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 171 (65.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 41 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 98
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 99 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 157
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TCI 307
L + L K + +D+D H G+G E+ F R+ + I
Sbjct: 158 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 215
Query: 308 TSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
+ + + +D+ Y + + + + + + P +V G D L D LG
Sbjct: 216 GAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E+V + +P++ML GGY ++ AR D + + PY
Sbjct: 276 NLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPY 331
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 332 NDYFEYF 338
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 171 (65.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 41 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 98
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 99 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 157
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TCI 307
L + L K + +D+D H G+G E+ F R+ + I
Sbjct: 158 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 215
Query: 308 TSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
+ + + +D+ Y + + + + + + P +V G D L D LG
Sbjct: 216 GAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E+V + +P++ML GGY ++ AR D + + PY
Sbjct: 276 NLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPY 331
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 332 NDYFEYF 338
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 171 (65.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 41 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 98
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 99 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 157
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TCI 307
L + L K + +D+D H G+G E+ F R+ + I
Sbjct: 158 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 215
Query: 308 TSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
+ + + +D+ Y + + + + + + P +V G D L D LG
Sbjct: 216 GAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E+V + +P++ML GGY ++ AR D + + PY
Sbjct: 276 NLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPY 331
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 332 NDYFEYF 338
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 171 (65.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 41 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 98
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 99 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 157
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TCI 307
L + L K + +D+D H G+G E+ F R+ + I
Sbjct: 158 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 215
Query: 308 TSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
+ + + +D+ Y + + + + + + P +V G D L D LG
Sbjct: 216 GAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E+ A+ +P++ML GGY ++ AR D + + PY
Sbjct: 276 NLTVKGHAKCVEV----AKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPY 331
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 332 NDYFEYF 338
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 172 (65.6 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 66/235 (28%), Positives = 105/235 (44%)
Query: 222 GGTLEAGFLALRRGW---SINIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSISTA 277
GG++E G L RG +IN GG HHA +++ GFC DI L +++LL +
Sbjct: 124 GGSME-GAARLNRGKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRV--- 179
Query: 278 MIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKE------AIR-----------CRIE 320
+ +D+D H G+G E+ F R+ TC K E +R +
Sbjct: 180 LYIDIDVHHGDGVEEAFYTTDRVM---TCSFHKYGEFFPGTGELRDIGVGKGKYHSVNVP 236
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDEL 380
L +D Y E + + + + P IV G D L D LG +S G + +
Sbjct: 237 LRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNG--HANCI 294
Query: 381 VFMKARERRVPIVMLTSGGY-LKQTARIIA--DSILNLADLGLISRPYNIWFIYY 432
++K+ +P++++ GGY ++ AR A +LN L PYN ++ YY
Sbjct: 295 NYVKSFN--IPMMVVGGGGYTMRNVARTWAYESGLLNNVKLP-DELPYNEYYEYY 346
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 172 (65.6 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 66/235 (28%), Positives = 105/235 (44%)
Query: 222 GGTLEAGFLALRRGW---SINIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSISTA 277
GG++E G L RG +IN GG HHA +++ GFC DI L +++LL +
Sbjct: 124 GGSME-GAARLNRGKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRV--- 179
Query: 278 MIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKE------AIR-----------CRIE 320
+ +D+D H G+G E+ F R+ TC K E +R +
Sbjct: 180 LYIDIDVHHGDGVEEAFYTTDRVM---TCSFHKYGEFFPGTGELRDIGVGKGKYHSVNVP 236
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDEL 380
L +D Y E + + + + P IV G D L D LG +S G + +
Sbjct: 237 LRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNG--HANCI 294
Query: 381 VFMKARERRVPIVMLTSGGY-LKQTARIIA--DSILNLADLGLISRPYNIWFIYY 432
++K+ +P++++ GGY ++ AR A +LN L PYN ++ YY
Sbjct: 295 NYVKSFN--IPMMVVGGGGYTMRNVARTWAYESGLLNNVKLP-DELPYNEYYEYY 346
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 103 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 160
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 161 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 219
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TCI 307
L + L K + +D+D H G+G E+ F R+ + I
Sbjct: 220 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 277
Query: 308 TSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
+ + + +D+ Y + + + + + + P +V G D L D LG
Sbjct: 278 GAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 337
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E+V + +P++ML GGY ++ AR D + + PY
Sbjct: 338 NLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPY 393
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 394 NDYFEYF 400
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 135 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 192
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 193 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 251
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TCI 307
L + L K + +D+D H G+G E+ F R+ + I
Sbjct: 252 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 309
Query: 308 TSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
+ + + +D+ Y + + + + + + P +V G D L D LG
Sbjct: 310 GAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 369
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E+V + +P++ML GGY ++ AR D + + PY
Sbjct: 370 NLTVKGHAKCVEVV----KTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPY 425
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 426 NDYFEYF 432
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 140 (54.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 164 IEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVA-VPNYFVQKCYLRPMRYHVG 222
+E + V+E++LL+ HT++Y++ +K + N+ E+ L + ++ + VG
Sbjct: 108 VEARAVTEDELLLVHTKEYVELMKSTQNMTE-EELKTLAEKYDSVYLHPGFFSSACLSVG 166
Query: 223 GTLE----AGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAM 278
L+ LR G+SIN G HHA K GFC + ++++ + + + +
Sbjct: 167 SVLQLVDKVMTSQLRNGFSINRPPG-HHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVL 225
Query: 279 IVDLDAHQGNGYEKDFMNETRI 300
IVD D H G G + F + +
Sbjct: 226 IVDWDVHHGQGIQYIFEEDPSV 247
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 13 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH--QFSD 70
LR G+SIN G HHA K GFC + ++++ + + + +IVD D H Q
Sbjct: 180 LRNGFSINRPPG-HHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQ 238
Query: 71 YYFPSAHSI 79
Y F S+
Sbjct: 239 YIFEEDPSV 247
Score = 83 (34.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 343 RSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
R F P++++ +AG D DPLG ++P+G + A R ++++ GGY
Sbjct: 691 REFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGR---VLIILEGGY 745
Score = 76 (31.8 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 33/160 (20%), Positives = 68/160 (42%)
Query: 148 IFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAA-----ISEVCPLV 202
IF+ E + +++ + I + +EE+L + H+ K++ +K S ++ + + +
Sbjct: 473 IFSRHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSI 532
Query: 203 AVPNYFVQKCYLRPMR-YHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADI 261
+ N L ++ + G +R +I G HHA + GFC +
Sbjct: 533 FISNESYTCALLAAGSCFNSAQAILTG--QVRNAVAIVRPPG-HHAEKDTACGFCFFNTA 589
Query: 262 SLLVKLLFQ-SKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
+L + ++ +IVD D H GNG + F + +
Sbjct: 590 ALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSV 629
Score = 74 (31.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQ 403
F P +++ AG D ++ DP G + +SP+ ++ A+ R +V+ GGY L+
Sbjct: 311 FQPQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKGVAQGR---LVLALEGGYNLQS 367
Query: 404 TARIIADSILNL 415
TA + S+ +L
Sbjct: 368 TAEGVCASMRSL 379
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 63/235 (26%), Positives = 106/235 (45%)
Query: 222 GGTLEAGFLALRRGW---SINIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSISTA 277
GG++E G L RG ++N GG HHA +++ GFC DI L +++LL +
Sbjct: 125 GGSME-GAARLNRGKCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRV--- 180
Query: 278 MIVDLDAHQGNGYEKDFMNETRIFIMETCITSKAKE------AIR-----------CRIE 320
+ +D+D H G+G E+ F R+ TC K E +R +
Sbjct: 181 LYIDIDVHHGDGVEEAFYTTDRVM---TCSFHKYGEFFPGTGELRDIGVGAGKNYAVNVP 237
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDEL 380
L +D Y E +++ + + P +V G D L D LG +S +G + +
Sbjct: 238 LRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEG--HANCV 295
Query: 381 VFMKARERRVPIVMLTSGGY-LKQTARI--IADSILNLADLGLISRPYNIWFIYY 432
++K+ +P++++ GGY ++ AR +LN L PYN ++ YY
Sbjct: 296 NYVKSFG--IPMMVVGGGGYTMRNVARTWCFETGLLNNVVLDK-DLPYNEYYEYY 347
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 70/234 (29%), Positives = 103/234 (44%)
Query: 222 GGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSISTA 277
GG++E G L RG + IN GG HHA +++ GFC DI L +++LL +
Sbjct: 123 GGSME-GAARLNRGQADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRV--- 178
Query: 278 MIVDLDAHQGNGYEKDFMNETRI----------FIMETC-ITS----KAK-EAIRCRIEL 321
+ +D D H G+G E+ F R+ F T +T K K AI I L
Sbjct: 179 LYIDTDVHHGDGVEEAFYTNDRVMTCSFHKFGEFFPGTGNLTDIGIGKGKYHAIN--IPL 236
Query: 322 APYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELV 381
+D Y E + + + + P IV G D L D LG +S +G V
Sbjct: 237 RDGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFV 296
Query: 382 FMKARERRVPIVMLTSGGY-LKQTARIIA--DSILNLADLGLISRPYNIWFIYY 432
R VP+++L GGY ++ AR A + N ++ PYN ++ YY
Sbjct: 297 ----RSLGVPVMVLGGGGYTIRNVARTWAFETGVCN-GEILPKELPYNGYYEYY 345
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 70/234 (29%), Positives = 103/234 (44%)
Query: 222 GGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSISTA 277
GG++E G L RG + IN GG HHA +++ GFC DI L +++LL +
Sbjct: 123 GGSME-GAARLNRGQADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRV--- 178
Query: 278 MIVDLDAHQGNGYEKDFMNETRI----------FIMETC-ITS----KAK-EAIRCRIEL 321
+ +D D H G+G E+ F R+ F T +T K K AI I L
Sbjct: 179 LYIDTDVHHGDGVEEAFYTNDRVMTCSFHKFGEFFPGTGNLTDIGIGKGKYHAIN--IPL 236
Query: 322 APYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELV 381
+D Y E + + + + P IV G D L D LG +S +G V
Sbjct: 237 RDGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFV 296
Query: 382 FMKARERRVPIVMLTSGGY-LKQTARIIA--DSILNLADLGLISRPYNIWFIYY 432
R VP+++L GGY ++ AR A + N ++ PYN ++ YY
Sbjct: 297 ----RSLGVPVMVLGGGGYTIRNVARTWAFETGVCN-GEILPKELPYNGYYEYY 345
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 74/307 (24%), Positives = 130/307 (42%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 41 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 98
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L + + IN GG HHA +++ GFC DI
Sbjct: 99 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDI 157
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE- 313
L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 158 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 215
Query: 314 -AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
A + + Y +D+ Y + + + + + P +V G D L D LG
Sbjct: 216 GAGKGKYYAVNYPLRDGIDDESYEAIFKPIMSKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E +MK+ +P++ML GGY +K AR D + + PY
Sbjct: 276 NLTIKGHAKCVE--YMKSFN--LPLLMLGGGGYTIKNVARCWTFETAVALDSTIPNELPY 331
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 332 NDYFEYF 338
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 166 (63.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 89/355 (25%), Positives = 144/355 (40%)
Query: 108 TRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQ 167
TR Y E H++ HP + + + + NY + K I P+
Sbjct: 3 TRKVSYFYDNEVGNHYYGPN--HPMKPHRMRMTHDL----VLNYGIYKKM----QIFRPR 52
Query: 168 EVSEEQLLIAHTEKYLKSLK---------WSFNVAA--ISEVCPLV-AVPNYFVQKCYLR 215
+ SE +L H++ Y+ LK +S + + E CP+ + N+ C +
Sbjct: 53 KASELELTNFHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNF----CQIS 108
Query: 216 PMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSI 274
+G ++ + +IN GG HHA +++ GFC DI L +++LL K
Sbjct: 109 SGG-SIGCAVKVN--SKESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELL---KHH 162
Query: 275 STAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKEA-------IRCRIE 320
+ +D+D H G+G E+ F R+ + T K+
Sbjct: 163 ERVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGDYFPGTGDVKDIGADKGKYYSLNFP 222
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFC-PDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDE 379
L +D+ Y + I + RS+ F P +V G D L D LG ++ +G + E
Sbjct: 223 LKDGIDDESY-QSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIE 281
Query: 380 LVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWFIYY 432
F+K+ VP+V+L GGY +K AR L D L PYN + YY
Sbjct: 282 --FLKSFN--VPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELPYNDYLEYY 332
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 66/232 (28%), Positives = 107/232 (46%)
Query: 195 ISEVCPLVA-VPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASET 250
I E CP+ A + +Y C L + GG++E G L + IN GG HHA ++
Sbjct: 117 IGEDCPIFAGLWDY----CTL-----YAGGSVE-GARRLNHKMNDIVINWPGGLHHAKKS 166
Query: 251 KGGGFCAYADISL-LVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMET---- 305
+ GFC DI L +++LL K + + +D+D H G+G ++ F N R+ +
Sbjct: 167 EASGFCYVNDIVLGILELLKYHKRV---LYIDIDIHHGDGVQEAFNNSDRVMTVSFHRFG 223
Query: 306 -------CITSKAK---EAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAG 355
I K + + L D+ YL+ E+ + +F P+ IV G
Sbjct: 224 QYFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCG 283
Query: 356 TDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTAR 406
+D L D LG A+S R + ++K+ + P+++L GGY L+ AR
Sbjct: 284 SDSLCEDRLGQFALSFNAHARA--VKYVKSLGK--PLMVLGGGGYTLRNVAR 331
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 61/222 (27%), Positives = 103/222 (46%)
Query: 96 DEITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEA 155
DEI EP + V + + Y +V F +LHP ++ + N L + +Y +
Sbjct: 16 DEII-EPDGADVKKR-NVAYYYHKDVGHFHYGQLHPMKPQRLV-VCNDL---VVSYEMP- 68
Query: 156 KFITQDNIIEPQEVSEEQLLIAHTEKYLKSL-----KWSFNVAA-------ISEVCPLVA 203
K++T ++E ++ + + HTE Y+ L K + I E CP+ A
Sbjct: 69 KYMT---VVESPKLDAADISVFHTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFA 125
Query: 204 -VPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYA 259
+ +Y C L + GG++E G L + IN GG HHA +++ GFC
Sbjct: 126 GLWDY----CTL-----YAGGSVE-GARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVN 175
Query: 260 DISL-LVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
DI L +++LL K + + +D+D H G+G ++ F N R+
Sbjct: 176 DIVLGILELLKYHKRV---LYIDIDIHHGDGVQEAFNNSDRV 214
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 164 (62.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 74/311 (23%), Positives = 134/311 (43%)
Query: 148 IFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNY 207
+ NY + K ++ + + E +L H+E Y+ L+ I+E V +
Sbjct: 46 VLNYGLHKKM----HLYKARPADAEDMLKFHSEDYVDFLE-RVTPENINE---WKDVKRF 97
Query: 208 FV-QKCYLRPMRY-----HVGGTLEAGFLALRRGW--SINIGGGFHHASETKGGGFCAYA 259
+ + C + P Y + GG++E R + +IN GG HHA + + GFC
Sbjct: 98 HIGEDCPVFPGLYDYCSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKDEASGFCYVN 157
Query: 260 DISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC-- 306
DI L + L K + + +D+D H G+G ++ F R+ F T
Sbjct: 158 DIVLAILELL--KFHARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFGGDFFPGTGDI 215
Query: 307 --ITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPL 364
I +K + + LA +D++YL + ++ + + P +IV G D L D L
Sbjct: 216 DEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFDRL 275
Query: 365 GLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR 423
G ++ +G + + F+K+ +P ++L GGY ++ AR D + +
Sbjct: 276 GCFNLTIKG--HAECVRFVKSFN--IPTLVLGGGGYTVRNVARCWTYETSVCVDTEVNNE 331
Query: 424 -PYNIWFIYYT 433
PYN + +Y+
Sbjct: 332 LPYNDYIQFYS 342
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 163 (62.4 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 88/366 (24%), Positives = 154/366 (42%)
Query: 87 FLKERKALEDEITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWK 146
F + K E+ +P + + Y V F LHP K ++ + L
Sbjct: 11 FTTDTKTRENTPIYDPNHPGTNNKYNVSYHYNPEVSRFHYGALHPM--KPFRLM---LTD 65
Query: 147 HIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVA--- 203
H+ ++ K + ++ P+ ++++LL H+E Y+ L+ + E C ++
Sbjct: 66 HL---VISYKLYEKMDLYTPRRATKDELLEFHSEDYIDFLQ-----SITPEKCKTISNDT 117
Query: 204 VPNYFV-QKCYLRPMRY-----HVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGG 254
+ + + C + Y + G +L+A L G S IN GG HHA + + G
Sbjct: 118 LAQFNIGDDCPIFDGMYDYSAIYAGASLDAT-RKLISGMSDIAINWSGGLHHAKKFEPSG 176
Query: 255 FCAYADISL-LVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIM---------- 303
FC DI L ++ LL + M +D+D H G+G ++ F N R+ +
Sbjct: 177 FCYVNDIVLSIINLLRVHPRV---MYIDIDLHHGDGVQEAFYNTDRVMTVSFHKYNGEFF 233
Query: 304 -------ETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGT 356
E I S AI + L +D+ Y+ ++ +E + F P IV G
Sbjct: 234 PGTGSVDEVGIGSGKNYAIN--VPLRDGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGA 291
Query: 357 DVLLNDPLGLLAISPQGIIRRDELV-FMKARERRVPIVMLTSGGYL-KQTARI--IADSI 412
D L D LG ++ I E V F+K+ +P++++ GGY + +R+ S+
Sbjct: 292 DSLGYDRLGCFNLN---IRAHGECVKFIKSFG--IPMLVVGGGGYTPRNVSRLWCYETSV 346
Query: 413 LNLADL 418
LN +L
Sbjct: 347 LNDVNL 352
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 163 (62.4 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 88/366 (24%), Positives = 154/366 (42%)
Query: 87 FLKERKALEDEITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWK 146
F + K E+ +P + + Y V F LHP K ++ + L
Sbjct: 11 FTTDTKTRENTPIYDPNHPGTNNKYNVSYHYNPEVSRFHYGALHPM--KPFRLM---LTD 65
Query: 147 HIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVA--- 203
H+ ++ K + ++ P+ ++++LL H+E Y+ L+ + E C ++
Sbjct: 66 HL---VISYKLYEKMDLYTPRRATKDELLEFHSEDYIDFLQ-----SITPEKCKTISNDT 117
Query: 204 VPNYFV-QKCYLRPMRY-----HVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGG 254
+ + + C + Y + G +L+A L G S IN GG HHA + + G
Sbjct: 118 LAQFNIGDDCPIFDGMYDYSAIYAGASLDAT-RKLISGMSDIAINWSGGLHHAKKFEPSG 176
Query: 255 FCAYADISL-LVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIM---------- 303
FC DI L ++ LL + M +D+D H G+G ++ F N R+ +
Sbjct: 177 FCYVNDIVLSIINLLRVHPRV---MYIDIDLHHGDGVQEAFYNTDRVMTVSFHKYNGEFF 233
Query: 304 -------ETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGT 356
E I S AI + L +D+ Y+ ++ +E + F P IV G
Sbjct: 234 PGTGSVDEVGIGSGKNYAIN--VPLRDGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGA 291
Query: 357 DVLLNDPLGLLAISPQGIIRRDELV-FMKARERRVPIVMLTSGGYL-KQTARI--IADSI 412
D L D LG ++ I E V F+K+ +P++++ GGY + +R+ S+
Sbjct: 292 DSLGYDRLGCFNLN---IRAHGECVKFIKSFG--IPMLVVGGGGYTPRNVSRLWCYETSV 346
Query: 413 LNLADL 418
LN +L
Sbjct: 347 LNDVNL 352
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 162 (62.1 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 71/307 (23%), Positives = 129/307 (42%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 40 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 97
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ A + L + + +N GG HHA +++ GFC DI
Sbjct: 98 EDCPVFDGLFEFCQLSAGGSV-ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDI 156
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE- 313
L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 157 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Query: 314 -AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
A + + Y +D+ Y + + + + +F P +V G+D L D LG
Sbjct: 215 GAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCF 274
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E V + +P++ML GGY ++ AR D + + PY
Sbjct: 275 NLTIKGHAKCVEFV----KSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPY 330
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 331 NDYFEYF 337
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/268 (21%), Positives = 112/268 (41%)
Query: 164 IEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGG 223
I +E E ++L HT++Y+ +K + + + + +V + G
Sbjct: 54 IPRREAEESEILAVHTKRYVDDVKSTETMTVEQQESFCTKYEDIYVNSATWHRAKLAAGA 113
Query: 224 TLE--AGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVD 281
+++ +A +R I HHA +G GFC + ++++ K Q+ +IVD
Sbjct: 114 SIDLMTSVMAAKRPGIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKAAIQNGQ--KVLIVD 171
Query: 282 LDAHQGNGYEK--DFMNETRIFIM---------------ETCITSKAKEAIRCRIELAPY 324
D H GNG ++ + M E + ++ +T I K I +
Sbjct: 172 YDVHAGNGTQECVEQMGEGNVQLISIHRYENGHFWPNMPQTGIYHNYKNTINLPLNTIGL 231
Query: 325 TE-DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFM 383
T+ D H L + ++ +F PD+++ ++G D + DP G + ++P G ++
Sbjct: 232 TDADYHAL--FTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRMLI- 288
Query: 384 KARERRVPIVMLTSGGYLKQTARIIADS 411
+ +P+ L GGY + ADS
Sbjct: 289 ---DTGIPVAALLEGGYFLDA--LAADS 311
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 71/307 (23%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 40 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 97
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ A + L + + +N GG HHA +++ GFC DI
Sbjct: 98 EDCPVFDGLFEFCQLSTGGSV-ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDI 156
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE- 313
L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 157 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Query: 314 -AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
A + + Y +D+ Y + + + + F P +V G+D L D LG
Sbjct: 215 GAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E V + +P++ML GGY ++ AR D + + PY
Sbjct: 275 NLTIKGHAKCVEFV----KSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPY 330
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 331 NDYFEYF 337
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 71/307 (23%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 40 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 97
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ A + L + + +N GG HHA +++ GFC DI
Sbjct: 98 EDCPVFDGLFEFCQLSTGGSV-ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDI 156
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE- 313
L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 157 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Query: 314 -AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
A + + Y +D+ Y + + + + F P +V G+D L D LG
Sbjct: 215 GAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E V + +P++ML GGY ++ AR D + + PY
Sbjct: 275 NLTIKGHAKCVEFV----KSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPY 330
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 331 NDYFEYF 337
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 71/307 (23%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 40 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 97
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ A + L + + +N GG HHA +++ GFC DI
Sbjct: 98 EDCPVFDGLFEFCQLSTGGSV-ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDI 156
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE- 313
L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 157 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Query: 314 -AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
A + + Y +D+ Y + + + + F P +V G+D L D LG
Sbjct: 215 GAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E V + +P++ML GGY ++ AR D + + PY
Sbjct: 275 NLTIKGHAKCVEFV----KSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPY 330
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 331 NDYFEYF 337
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 71/307 (23%), Positives = 128/307 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 40 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 97
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ A + L + + +N GG HHA +++ GFC DI
Sbjct: 98 EDCPVFDGLFEFCQLSTGGSV-ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDI 156
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE- 313
L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 157 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Query: 314 -AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
A + + Y +D+ Y + + + + F P +V G+D L D LG
Sbjct: 215 GAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
Query: 368 AISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PY 425
++ +G + E V + +P++ML GGY ++ AR D + + PY
Sbjct: 275 NLTIKGHAKCVEFV----KSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPY 330
Query: 426 NIWFIYY 432
N +F Y+
Sbjct: 331 NDYFEYF 337
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 75/290 (25%), Positives = 122/290 (42%)
Query: 148 IFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNY 207
+ NY + K I P + S + +L H+++Y+ L+ V + C VA Y
Sbjct: 37 VMNYGLHKKM----KIYRPYKASAQDMLRFHSDEYIAYLQ---QVTPQNIQCNSVAYTKY 89
Query: 208 FV-----QKCYLRPMRY-----HVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGG 254
+ C + + + G +LE G L S IN GG HHA + + G
Sbjct: 90 LAHFSVGEDCPVFDGLFDFCAMYTGASLE-GAQKLNHNHSDICINWSGGLHHAKKFEASG 148
Query: 255 FCAYADISL-LVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FI 302
FC DI + +++LL K + +D+D H G+G ++ F R+ F
Sbjct: 149 FCYVNDIVIGILELL---KYHPRVLYIDIDVHHGDGVQEAFYLTDRVMTASFHKYGNYFF 205
Query: 303 METC----ITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDV 358
T I +++ + L +DQ Y + + + + + P IV G D
Sbjct: 206 PGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGADS 265
Query: 359 LLNDPLGLLAISPQGIIRRDELV-FMKARERRVPIVMLTSGGY-LKQTAR 406
L D LG ++S +G E V F+K E VP +++ GGY L+ AR
Sbjct: 266 LAGDRLGCFSLSTKG---HGECVKFVK--ELNVPTLVVGGGGYTLRNVAR 310
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 159 (61.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 71/308 (23%), Positives = 128/308 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 45 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 102
Query: 210 QKC-----YLRPMRYHVGGTL-EAGFLALRRGWS---INIGGGFHHASETKGGGFCAYAD 260
+ C + GG++ A + L + + +N GG HHA +++ GFC D
Sbjct: 103 EDCPVFDGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVND 162
Query: 261 ISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE 313
I L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 163 IVLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD 220
Query: 314 --AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
A + + Y +D+ Y + + + + F P +V G+D L D LG
Sbjct: 221 IGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGC 280
Query: 367 LAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-P 424
++ +G + E V + +P++ML GGY ++ AR D + + P
Sbjct: 281 FNLTIKGHAKCVEFV----KSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 336
Query: 425 YNIWFIYY 432
YN +F Y+
Sbjct: 337 YNDYFEYF 344
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 53/212 (25%), Positives = 92/212 (43%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
++N GG HHA +++ GFC DI L + L K + +D+D H G+G E+ F
Sbjct: 42 AVNWAGGLHHAKKSEASGFCYVNDIVLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYT 99
Query: 297 ETRIFIMETCI-------TSKAKE--AIRCRIELAPYT-----EDQHYLEKIEAGLERSL 342
R+ + T ++ A + + Y +D+ Y + + + +
Sbjct: 100 TDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVM 159
Query: 343 RSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-L 401
F P +V G+D L D LG ++ +G + E V + +P++ML GGY +
Sbjct: 160 EMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFV----KSFNLPMLMLGGGGYTI 215
Query: 402 KQTARIIADSILNLADLGLISR-PYNIWFIYY 432
+ AR D + + PYN +F Y+
Sbjct: 216 RNVARCWTYETAVALDTEIPNELPYNDYFEYF 247
>UNIPROTKB|B5MD06 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11, isoform CRA_h"
species:9606 "Homo sapiens" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CH471055
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
EMBL:AC027124 UniGene:Hs.404802 HGNC:HGNC:19086
HOGENOM:HOG000074071 HOVERGEN:HBG104774 IPI:IPI00879882 SMR:B5MD06
STRING:B5MD06 Ensembl:ENST00000405025 Uniprot:B5MD06
Length = 118
Score = 133 (51.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 126 LEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKS 185
LEKLHPFD+ KW + N+L E K ++ ++E +E SEE LL+ HT +YL
Sbjct: 3 LEKLHPFDAGKWGKVINFL--------KEEKLLSDSMLVEAREASEEDLLVVHTRRYLNE 54
Query: 186 LK 187
LK
Sbjct: 55 LK 56
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 158 (60.7 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 73/308 (23%), Positives = 132/308 (42%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + +++ H+++Y++ L+ S +SE + N
Sbjct: 38 NLLLNYGLYRKMEIYRPHKATADEMTKFHSDEYVRFLR-SIRPDNMSEYNKQMQRFNVG- 95
Query: 210 QKCYLRPMRYH-----VGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + Y GG++ A + L + S IN GGG HHA +++ GFC DI
Sbjct: 96 EDCPVFDGLYEFCQLSAGGSVAAA-VKLNKQASEICINWGGGLHHAKKSEASGFCYVNDI 154
Query: 262 SL-LVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TC 306
L +++LL K + +D+D H G+G E+ F R+ +
Sbjct: 155 VLGILELL---KYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRD 211
Query: 307 ITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
I + + I L +D Y + + + +F P +V G D L D LG
Sbjct: 212 IGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDRLGC 271
Query: 367 LAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIA-DSILNLADLGLISRP 424
++ +G + E V ++ +P +M+ GGY ++ +R ++ + LA P
Sbjct: 272 FNLTVKGHGKCVEFV----KKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANELP 327
Query: 425 YNIWFIYY 432
YN +F Y+
Sbjct: 328 YNDYFEYF 335
Score = 40 (19.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 83 RKVEFLKERKALEDEIT 99
RK+E + KA DE+T
Sbjct: 47 RKMEIYRPHKATADEMT 63
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 134 (52.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 53/203 (26%), Positives = 89/203 (43%)
Query: 222 GGTLEAGFLAL--RRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMI 279
GGT+ A + + +IN GG+HHA + + GFC Y + ++L L + K +
Sbjct: 117 GGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC-YLNDAVLGILRLRRK-FDRILY 174
Query: 280 VDLDAHQGNGYEKDFMNETRI-----------FIMETCITSKAK----EAIRCRIELAPY 324
VDLD H G+G E F +++ F T S + +
Sbjct: 175 VDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQDG 234
Query: 325 TEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMK 384
+D+ Y E+ L+ ++F P +V G D + DP+ ++P GI + + V
Sbjct: 235 IQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVL-- 292
Query: 385 ARERRVPIVMLTSGGY-LKQTAR 406
+ ++ ++L GGY L TAR
Sbjct: 293 --QWQLATLILGGGGYNLANTAR 313
Score = 61 (26.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 97 EITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAK 156
EI EP S + P +Y PEY L K+ P K+ + + L+EA
Sbjct: 2 EIPEEPANSGHSLPPVYIYSPEYVSICDSLVKV-P---KRASMVHS---------LIEAY 48
Query: 157 FI-TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
+ Q I++P+ S E++ HT+ YL+ L+
Sbjct: 49 ALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ 80
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 154 (59.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 71/308 (23%), Positives = 128/308 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 40 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 97
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ A + L + + +N GG HHA +++ GFC DI
Sbjct: 98 EDCPVFDGLFEFCQLSTGGSV-ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDI 156
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE- 313
L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 157 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Query: 314 -AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
A + + Y +D+ Y + + + + F P +V G+D L D LG
Sbjct: 215 GAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
Query: 368 AIS-PQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-P 424
++ +G + E V + +P++ML GGY ++ AR D + + P
Sbjct: 275 NLTIKEGHAKCVEFV----KSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 330
Query: 425 YNIWFIYY 432
YN +F Y+
Sbjct: 331 YNDYFEYF 338
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 154 (59.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 71/308 (23%), Positives = 128/308 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 40 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 97
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ A + L + + +N GG HHA +++ GFC DI
Sbjct: 98 EDCPVFDGLFEFCQLSTGGSV-ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDI 156
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE- 313
L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 157 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Query: 314 -AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
A + + Y +D+ Y + + + + F P +V G+D L D LG
Sbjct: 215 GAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
Query: 368 AIS-PQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-P 424
++ +G + E V + +P++ML GGY ++ AR D + + P
Sbjct: 275 NLTIKEGHAKCVEFV----KSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 330
Query: 425 YNIWFIYY 432
YN +F Y+
Sbjct: 331 YNDYFEYF 338
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 154 (59.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 71/308 (23%), Positives = 128/308 (41%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H++ Y+K L+ S +SE + N
Sbjct: 40 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR-SIRPDNMSEYSKQMQRFNVG- 97
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ A + L + + +N GG HHA +++ GFC DI
Sbjct: 98 EDCPVFDGLFEFCQLSTGGSV-ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDI 156
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKE- 313
L + L K + +D+D H G+G E+ F R+ + T ++
Sbjct: 157 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDI 214
Query: 314 -AIRCRIELAPYT-----EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLL 367
A + + Y +D+ Y + + + + F P +V G+D L D LG
Sbjct: 215 GAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
Query: 368 AIS-PQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-P 424
++ +G + E V + +P++ML GGY ++ AR D + + P
Sbjct: 275 NLTIKEGHAKCVEFV----KSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 330
Query: 425 YNIWFIYY 432
YN +F Y+
Sbjct: 331 YNDYFEYF 338
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 153 (58.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 80/298 (26%), Positives = 131/298 (43%)
Query: 156 KFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLR 215
+F ++D I Q+VS + + + KSL +FNV CP+ P F + C
Sbjct: 60 RFHSEDYIDFLQKVSPNNM-----QGFTKSLN-TFNVGGD---CPVF--PGLF-EFC--- 104
Query: 216 PMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
RY G +L+ G L +IN GG HHA + + GFC DI ++ +L K
Sbjct: 105 -SRY-TGASLQ-GATQLNHKICDIAINWAGGLHHAKKFEASGFCYVNDI--VISILELLK 159
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC-ITSKAKEAIR--C- 317
+ +D+D H G+G ++ F R+ F T + E+ R C
Sbjct: 160 YHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCL 219
Query: 318 RIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRR 377
+ L +DQ Y + + +++ + + P IV G D L D LG +S +G
Sbjct: 220 NVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRG---H 276
Query: 378 DELV-FMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWFIYY 432
E V F+K ++P+++L GGY ++ AR L + + PY+ +F Y+
Sbjct: 277 GECVEFVKGF--KIPLLVLGGGGYTVRNVARCWTFETSLLVEESISDELPYSEYFEYF 332
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 152 (58.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 74/303 (24%), Positives = 128/303 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-----------SFNVAAISEVCPLVAVPNYFVQK 211
+ +P + S+ + H+E Y+ L+ S N + + CP+ P F +
Sbjct: 47 VFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVF--PGLF-EF 103
Query: 212 CYLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADISL-LVKL 267
C RY G +L+ G L +IN GG HHA + + GFC DI + +++L
Sbjct: 104 C----SRY-TGASLQ-GATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILEL 157
Query: 268 LFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC----ITSKAK 312
L K + +D+D H G+G ++ F R+ F T + +++
Sbjct: 158 L---KYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESG 214
Query: 313 EAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQ 372
+ L +DQ Y + + + + + P IV G D L D LG +S +
Sbjct: 215 RYYALNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRDRLGCFNLSIR 274
Query: 373 GIIRRDELV-FMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWF 429
G E V ++K+ +P+++L GGY ++ AR L D + PY+ +F
Sbjct: 275 G---HGECVEYVKSFN--IPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSEYF 329
Query: 430 IYY 432
Y+
Sbjct: 330 EYF 332
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 132 (51.5 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 45/171 (26%), Positives = 82/171 (47%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
+IN GG+HHA + + GFC Y + ++L L + K + VDLD H G+G D ++
Sbjct: 134 AINWSGGWHHAKKDEASGFC-YLNDAVLGILRLRRK-FERILYVDLDLHHGDG-TGD-VS 189
Query: 297 ETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGT 356
+ + K + + + +D+ Y + E+ L+ ++F P +V G
Sbjct: 190 DVGL--------GKGRY-YSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGA 240
Query: 357 DVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTAR 406
D + DP+ ++P GI + + + + ++ ++L GGY L TAR
Sbjct: 241 DTIAGDPMCSFNMTPVGIGKCLKYIL----QWQLATLILGGGGYNLANTAR 287
Score = 57 (25.1 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 152 LVEAKFI-TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
L+EA + Q I++P+ S E++ HT+ YL+ L+
Sbjct: 44 LIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ 80
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 138 (53.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 46/186 (24%), Positives = 83/186 (44%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
+IN GG+HHA + + GFC Y + ++L L + K + +DLD H G+G E F
Sbjct: 134 AINWPGGWHHAKKDEASGFC-YLNDAVLGILRLRQK-FDRILYIDLDLHHGDGVEDAFSF 191
Query: 297 ETRIFIME---------------TCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERS 341
+++ + T I + + +D+ Y + E L+
Sbjct: 192 TSKVMTVSLHKFSPGFFPGTGDVTDIGLGKGRYYSVNVPIQDGIQDEKYYQICETVLKEV 251
Query: 342 LRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY- 400
+F P+ +V G D + DP+ ++P+G+ + + V + ++ ++L GGY
Sbjct: 252 YAAFNPEAVVLQLGADTIAGDPMCSFNMTPEGVGKCLKYVL----QWQLATLILGGGGYN 307
Query: 401 LKQTAR 406
L TAR
Sbjct: 308 LANTAR 313
Score = 54 (24.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 152 LVEA-KFITQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
L+EA + II+P+ S E++ HT+ YL+ L+
Sbjct: 44 LIEAYSLLDHMMIIKPKVASMEEMASFHTDAYLQHLQ 80
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/206 (27%), Positives = 93/206 (45%)
Query: 220 HVGGTLEAGFLALRRGW---SINIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSIS 275
+ GG++ G + L G +IN GG HHA + + GFC DI L +++LL Q + +
Sbjct: 121 YAGGSV-GGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERV- 178
Query: 276 TAMIVDLDAHQGNGYEKDFMNETRIFIME--------------TCITSKAKEAIRCRIEL 321
+ VD+D H G+G E+ F R+ + I + + + L
Sbjct: 179 --LYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPL 236
Query: 322 APYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELV 381
+D+ Y + + + + F P +V G D L D LG +S +G + +
Sbjct: 237 DDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKG--HAECVK 294
Query: 382 FMKARERRVPIVMLTSGGY-LKQTAR 406
FM R VP+++L GGY ++ AR
Sbjct: 295 FM--RSFNVPLLLLGGGGYTIRNVAR 318
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 134 (52.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 53/203 (26%), Positives = 89/203 (43%)
Query: 222 GGTLEAGFLAL--RRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMI 279
GGT+ A + + +IN GG+HHA + + GFC Y + ++L L + K +
Sbjct: 117 GGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFC-YLNDAVLGILRLRRK-FDRILY 174
Query: 280 VDLDAHQGNGYEKDFMNETRI-----------FIMETCITSKAK----EAIRCRIELAPY 324
VDLD H G+G E F +++ F T S + +
Sbjct: 175 VDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQDG 234
Query: 325 TEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMK 384
+D+ Y E+ L+ ++F P +V G D + DP+ ++P GI + + V
Sbjct: 235 IQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVL-- 292
Query: 385 ARERRVPIVMLTSGGY-LKQTAR 406
+ ++ ++L GGY L TAR
Sbjct: 293 --QWQLATLILGGGGYNLANTAR 313
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 97 EITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAK 156
E+ EP S + P +Y PEY L K+ P K+ + + L+EA
Sbjct: 2 EMPEEPANSGHSLPPVYIYSPEYVSICDSLVKV-P---KRASMVHS---------LIEAY 48
Query: 157 FI-TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
+ Q I++P+ S E++ HT+ YL+ L+
Sbjct: 49 ALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ 80
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 77/303 (25%), Positives = 129/303 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-----------SFNVAAISEVCPLVAVPNYFVQK 211
+ +P + S+ + H+E Y+ L+ S N + + CP+ P F +
Sbjct: 47 VFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVF--PGLF-EF 103
Query: 212 CYLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADISL-LVKL 267
C RY G +L+ G L +IN GG HHA + + GFC DI + +++L
Sbjct: 104 C----SRY-TGASLQ-GATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILEL 157
Query: 268 LFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC-ITSKAKEAI 315
L K + +D+D H G+G ++ F R+ F T + E+
Sbjct: 158 L---KYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESG 214
Query: 316 R--C-RIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQ 372
R C + L +DQ Y + + + + + P IV G D L D LG +S +
Sbjct: 215 RYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIR 274
Query: 373 GIIRRDELV-FMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWF 429
G E V ++K+ +P+++L GGY ++ AR L D + PY+ +F
Sbjct: 275 G---HGECVEYVKSFN--IPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSEYF 329
Query: 430 IYY 432
Y+
Sbjct: 330 EYF 332
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 134 (52.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 48/186 (25%), Positives = 83/186 (44%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
+IN GG+HHA + + GFC Y + ++L L + K + VDLD H G+G E F
Sbjct: 134 AINWSGGWHHAKKDEASGFC-YLNDAVLGILRLRRK-FERILYVDLDLHHGDGVEDAFSF 191
Query: 297 ETRI-----------FIMETCITSKAK----EAIRCRIELAPYTEDQHYLEKIEAGLERS 341
+++ F T S + + +D+ Y + E+ L+
Sbjct: 192 TSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEV 251
Query: 342 LRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY- 400
++F P +V G D + DP+ ++P GI + + + + ++ ++L GGY
Sbjct: 252 YQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYIL----QWQLATLILGGGGYN 307
Query: 401 LKQTAR 406
L TAR
Sbjct: 308 LANTAR 313
Score = 57 (25.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 152 LVEAKFI-TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
L+EA + Q I++P+ S E++ HT+ YL+ L+
Sbjct: 44 LIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ 80
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 110 (43.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 33/141 (23%), Positives = 67/141 (47%)
Query: 170 SEEQLLIAHTEKYLKSLKWSFNVA--AISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEA 227
+ E++ + HT+K L+ L+ + + + E + ++ + L+ R VG L++
Sbjct: 479 TNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEK-EFNSIYLTRDTLKVARKAVGAVLQS 537
Query: 228 G---FL--ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDL 282
F A +R + + HHAS +K GFC + ++++ K + +I+D
Sbjct: 538 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 597
Query: 283 DAHQGNGYEKDFMNETRIFIM 303
D H GNG ++ F ++ + M
Sbjct: 598 DVHHGNGTQEIFYEDSNVMYM 618
Score = 91 (37.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
HHA GFC + +++ + F S + +IVDLD H G+G ++ F ++ R+
Sbjct: 145 HHADSVSPCGFCLFNNVAQAAEEAFFSGA-ERILIVDLDVHHGHGTQRIFYDDKRV 199
Score = 87 (35.7 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 327 DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKAR 386
D YL I L F P ++ +AG D LL DPLG + ++P G L +K+
Sbjct: 245 DSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHI--LYHLKSL 302
Query: 387 ERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNI 427
+ +V+L GGY Q + + + + LG P++I
Sbjct: 303 AQGRMLVVL-EGGYNHQISAVAVQRCVRVL-LGYA--PFSI 339
Score = 71 (30.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY---- 400
F PD+++ +AG D ++DPLG ++P+ + A R I+ + GGY
Sbjct: 679 FNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGR---IITVLEGGYNLTS 735
Query: 401 LKQTARIIADSILN 414
+ +A+ + + + N
Sbjct: 736 ISNSAQAVCEVLQN 749
Score = 64 (27.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 26 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH 66
HHA GFC + +++ + F S + +IVDLD H
Sbjct: 145 HHADSVSPCGFCLFNNVAQAAEEAFFSGA-ERILIVDLDVH 184
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 110 (43.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 33/141 (23%), Positives = 67/141 (47%)
Query: 170 SEEQLLIAHTEKYLKSLKWSFNVA--AISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEA 227
+ E++ + HT+K L+ L+ + + + E + ++ + L+ R VG L++
Sbjct: 481 TNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEK-EFNSIYLTRDTLKVARKAVGAVLQS 539
Query: 228 G---FL--ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDL 282
F A +R + + HHAS +K GFC + ++++ K + +I+D
Sbjct: 540 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 599
Query: 283 DAHQGNGYEKDFMNETRIFIM 303
D H GNG ++ F ++ + M
Sbjct: 600 DVHHGNGTQEIFYEDSNVMYM 620
Score = 91 (37.1 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
HHA GFC + +++ + F S + +IVDLD H G+G ++ F ++ R+
Sbjct: 147 HHADSVSPCGFCLFNNVAQAAEEAFFSGA-ERILIVDLDVHHGHGTQRIFYDDKRV 201
Score = 87 (35.7 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 327 DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKAR 386
D YL I L F P ++ +AG D LL DPLG + ++P G L +K+
Sbjct: 247 DSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHI--LYHLKSL 304
Query: 387 ERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNI 427
+ +V+L GGY Q + + + + LG P++I
Sbjct: 305 AQGRMLVVL-EGGYNHQISAVAVQRCVRVL-LGYA--PFSI 341
Score = 71 (30.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY---- 400
F PD+++ +AG D ++DPLG ++P+ + A R I+ + GGY
Sbjct: 681 FNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGR---IITVLEGGYNLTS 737
Query: 401 LKQTARIIADSILN 414
+ +A+ + + + N
Sbjct: 738 ISNSAQAVCEVLQN 751
Score = 64 (27.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 26 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH 66
HHA GFC + +++ + F S + +IVDLD H
Sbjct: 147 HHADSVSPCGFCLFNNVAQAAEEAFFSGA-ERILIVDLDVH 186
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 110 (43.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 33/141 (23%), Positives = 67/141 (47%)
Query: 170 SEEQLLIAHTEKYLKSLKWSFNVA--AISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEA 227
+ E++ + HT+K L+ L+ + + + E + ++ + L+ R VG L++
Sbjct: 481 TNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEK-EFNSIYLTRDTLKVARKAVGAVLQS 539
Query: 228 G---FL--ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDL 282
F A +R + + HHAS +K GFC + ++++ K + +I+D
Sbjct: 540 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 599
Query: 283 DAHQGNGYEKDFMNETRIFIM 303
D H GNG ++ F ++ + M
Sbjct: 600 DVHHGNGTQEIFYEDSNVMYM 620
Score = 91 (37.1 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
HHA GFC + +++ + F S + +IVDLD H G+G ++ F ++ R+
Sbjct: 147 HHADSVSPCGFCLFNNVAQAAEEAFFSGA-ERILIVDLDVHHGHGTQRIFYDDKRV 201
Score = 87 (35.7 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 327 DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKAR 386
D YL I L F P ++ +AG D LL DPLG + ++P G L +K+
Sbjct: 247 DSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHI--LYHLKSL 304
Query: 387 ERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRPYNI 427
+ +V+L GGY Q + + + + LG P++I
Sbjct: 305 AQGRMLVVL-EGGYNHQISAVAVQRCVRVL-LGYA--PFSI 341
Score = 71 (30.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY---- 400
F PD+++ +AG D ++DPLG ++P+ + A R I+ + GGY
Sbjct: 681 FNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGR---IITVLEGGYNLTS 737
Query: 401 LKQTARIIADSILN 414
+ +A+ + + + N
Sbjct: 738 ISNSAQAVCEVLQN 751
Score = 64 (27.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 26 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH 66
HHA GFC + +++ + F S + +IVDLD H
Sbjct: 147 HHADSVSPCGFCLFNNVAQAAEEAFFSGA-ERILIVDLDVH 186
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 72/309 (23%), Positives = 128/309 (41%)
Query: 148 IFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNY 207
I NY + K I P + E++ H++ Y+K L+ + +SE + N
Sbjct: 41 ILNYGLYRKM----EIYRPHKAVMEEMTKYHSDDYVKFLR-TIRPDNMSEYTKQMQRFNV 95
Query: 208 FVQKCYLRPMRYHV-----GGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYA 259
+ C + Y GG++ AG + L + + IN GG HHA +++ GFC
Sbjct: 96 G-EDCPVFDGLYEFCQLSSGGSV-AGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVN 153
Query: 260 DISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME--------------T 305
DI L + L K + +D+D H G+G E+ F R+ +
Sbjct: 154 DIVLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLR 211
Query: 306 CITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLG 365
I + + L +D+ Y + + + + + + P I G D L D LG
Sbjct: 212 DIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLSGDRLG 271
Query: 366 LLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR- 423
++ +G + E FMK + +P++++ GGY ++ AR + + +
Sbjct: 272 CFNLTLKGHAKCVE--FMK--QYNLPLLLMGGGGYTIRNVARCWTYETSTALGVEIANEL 327
Query: 424 PYNIWFIYY 432
PYN +F Y+
Sbjct: 328 PYNDYFEYF 336
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 63/266 (23%), Positives = 114/266 (42%)
Query: 162 NIIEPQEVSEEQLLIAHTEKYLKSLK--WSFNVAAISEVCPLVAV-PNYFVQKCYLRPMR 218
N++ P S ++ H++ Y+ L+ S N++ ++ +V + V +
Sbjct: 51 NVMRPARASFSEITRYHSDDYINFLRNVKSDNMSTFTDQMARFSVGEDCPVFDGMYEFCQ 110
Query: 219 YHVGGTLEAGFLALRRGWSINIG--GGFHHASETKGGGFCAYADISL-LVKLLFQSKSIS 275
GG+L A R+ I I GG HHA +++ GFC DI L +++LL K +
Sbjct: 111 LSCGGSLAAAARLNRQESEIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKHHKRV- 169
Query: 276 TAMIVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKEA-------IRCRIEL 321
+ +D+D H G+G E+ F R+ + T K+ + L
Sbjct: 170 --LYIDIDVHHGDGVEEAFYTTDRVMTVSFHKHGEYFPGTGDLKDVGAGSGKYYALNVPL 227
Query: 322 APYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELV 381
+D Y + + F P+ +V G D L D LG+ ++ G + E
Sbjct: 228 RDGVDDVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVE-- 285
Query: 382 FMKARERRVPIVMLTSGGY-LKQTAR 406
+MK+ VP++++ GGY ++ +R
Sbjct: 286 YMKSFN--VPLLLVGGGGYTIRNVSR 309
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 128 (50.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 48/186 (25%), Positives = 81/186 (43%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
+IN GG+HHA + + GFC Y + ++L L + K + VDLD H G+G E F
Sbjct: 172 AINWSGGWHHAKKDEASGFC-YLNDAVLGILRLRRK-FDRILYVDLDLHHGDGVEDAFSF 229
Query: 297 ETRI-----------FIMETCITSKAK----EAIRCRIELAPYTEDQHYLEKIEAGLERS 341
+++ F T S + + +D+ Y E+ L+
Sbjct: 230 TSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEV 289
Query: 342 LRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY- 400
+F P +V G D + DP+ ++P GI + + + + ++ ++L GGY
Sbjct: 290 YIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYIL----QWQLATLILGGGGYN 345
Query: 401 LKQTAR 406
L TAR
Sbjct: 346 LANTAR 351
Score = 62 (26.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 97 EITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAK 156
E EP ES + P +Y PEY L K+ P K+ + + L+EA
Sbjct: 40 EEPEEPAESGQSLPPVYIYSPEYVSMCDSLAKV-P---KRASMVHS---------LIEAY 86
Query: 157 FI-TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
+ Q I++P+ S E++ HT+ YL+ L+
Sbjct: 87 ALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ 118
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 60/231 (25%), Positives = 102/231 (44%)
Query: 222 GGTLEAGFLALRRGW---SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAM 278
GG++E G L R ++N GG HHA +++ GFC DI L + L + K +
Sbjct: 132 GGSME-GAARLNRNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQ--RVL 188
Query: 279 IVDLDAHQGNGYEKDFMNETRIFIMETCI-------TSKAKEA-------IRCRIELAPY 324
VD+D H G+G E+ F R+ + T + ++ L
Sbjct: 189 YVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGQGKYYAVNFPLRDG 248
Query: 325 TEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMK 384
+D Y E ++ + + P+ +V G D L D LG +S +G + + ++K
Sbjct: 249 IDDVSYKSIFEPVIKSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRG--HANCVKYVK 306
Query: 385 ARERRVPIVMLTSGGY-LKQTARIIA--DSILNLADLGLISRPYNIWFIYY 432
+ +P +++ GGY ++ AR A IL +LG PYN ++ Y+
Sbjct: 307 SFN--LPTLIVGGGGYTMRNVARTWAFETGILVGDNLGS-ELPYNDYYEYF 354
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 78/300 (26%), Positives = 120/300 (40%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-------SFNVAA----ISEVCPLVAVPNYFVQK 211
I P S E + H+++Y+ LK SFN + E CPL + +
Sbjct: 57 IFRPFPASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLF---DGLYEF 113
Query: 212 CYLRPMRYHVGGTLEAGFLALRRGWSINIG--GGFHHASETKGGGFCAYADISL-LVKLL 268
C L GG+L A ++ I I GG HHA +++ GFC DI L +++LL
Sbjct: 114 CQLSS-----GGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELL 168
Query: 269 FQSKSISTAMIVDLDAHQGNGYEKDFMNETRI----------FIMETC----ITSKAKEA 314
K + + VD+D H G+G E+ F R+ F T I + +
Sbjct: 169 KYHKRV---LYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGDLKDIGAGKGKL 225
Query: 315 IRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGI 374
+ L D Y + + + + F P +V G D L D LG ++ +G
Sbjct: 226 YSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKG- 284
Query: 375 IRRDELVFMKARERRVPIVMLTSGGYL-KQTARIIADSILNLADLGLISR-PYNIWFIYY 432
E R VP++M+ GGY + AR D + + PYN +F Y+
Sbjct: 285 --HGECARF-FRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYNDYFEYF 341
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 78/300 (26%), Positives = 120/300 (40%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-------SFNVAA----ISEVCPLVAVPNYFVQK 211
I P S E + H+++Y+ LK SFN + E CPL + +
Sbjct: 57 IFRPFPASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLF---DGLYEF 113
Query: 212 CYLRPMRYHVGGTLEAGFLALRRGWSINIG--GGFHHASETKGGGFCAYADISL-LVKLL 268
C L GG+L A ++ I I GG HHA +++ GFC DI L +++LL
Sbjct: 114 CQLSS-----GGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELL 168
Query: 269 FQSKSISTAMIVDLDAHQGNGYEKDFMNETRI----------FIMETC----ITSKAKEA 314
K + + VD+D H G+G E+ F R+ F T I + +
Sbjct: 169 KYHKRV---LYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGDLKDIGAGKGKL 225
Query: 315 IRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGI 374
+ L D Y + + + + F P +V G D L D LG ++ +G
Sbjct: 226 YSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKG- 284
Query: 375 IRRDELVFMKARERRVPIVMLTSGGYL-KQTARIIADSILNLADLGLISR-PYNIWFIYY 432
E R VP++M+ GGY + AR D + + PYN +F Y+
Sbjct: 285 --HGECARF-FRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYNDYFEYF 341
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 76/303 (25%), Positives = 129/303 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-----------SFNVAAISEVCPLVAVPNYFVQK 211
+ +P + S+ + H+E Y+ L+ S N + + CP+ P F +
Sbjct: 47 VFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVF--PGLF-EF 103
Query: 212 CYLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADISL-LVKL 267
C RY G +L+ G L +IN GG HHA + + GFC DI + +++L
Sbjct: 104 C----SRY-TGASLQ-GATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILEL 157
Query: 268 LFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC-ITSKAKEAI 315
L K + +D+D H G+G ++ F R+ F T + E+
Sbjct: 158 L---KYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESG 214
Query: 316 R--C-RIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQ 372
R C + L +DQ Y + + + + + P IV G D L D LG +S +
Sbjct: 215 RYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIR 274
Query: 373 GIIRRDELV-FMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWF 429
G E V ++K+ +P+++L GGY ++ AR L + + PY+ +F
Sbjct: 275 G---HGECVEYVKSFN--IPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYF 329
Query: 430 IYY 432
Y+
Sbjct: 330 EYF 332
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 76/303 (25%), Positives = 129/303 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-----------SFNVAAISEVCPLVAVPNYFVQK 211
+ +P + S+ + H+E Y+ L+ S N + + CP+ P F +
Sbjct: 47 VFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVF--PGLF-EF 103
Query: 212 CYLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADISL-LVKL 267
C RY G +L+ G L +IN GG HHA + + GFC DI + +++L
Sbjct: 104 C----SRY-TGASLQ-GATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILEL 157
Query: 268 LFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC-ITSKAKEAI 315
L K + +D+D H G+G ++ F R+ F T + E+
Sbjct: 158 L---KYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESG 214
Query: 316 R--C-RIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQ 372
R C + L +DQ Y + + + + + P IV G D L D LG +S +
Sbjct: 215 RYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIR 274
Query: 373 GIIRRDELV-FMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWF 429
G E V ++K+ +P+++L GGY ++ AR L + + PY+ +F
Sbjct: 275 G---HGECVEYVKSFN--IPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYF 329
Query: 430 IYY 432
Y+
Sbjct: 330 EYF 332
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 76/303 (25%), Positives = 129/303 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-----------SFNVAAISEVCPLVAVPNYFVQK 211
+ +P + S+ + H+E Y+ L+ S N + + CP+ P F +
Sbjct: 47 VFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVF--PGLF-EF 103
Query: 212 CYLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADISL-LVKL 267
C RY G +L+ G L +IN GG HHA + + GFC DI + +++L
Sbjct: 104 C----SRY-TGASLQ-GATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILEL 157
Query: 268 LFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC-ITSKAKEAI 315
L K + +D+D H G+G ++ F R+ F T + E+
Sbjct: 158 L---KYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESG 214
Query: 316 R--C-RIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQ 372
R C + L +DQ Y + + + + + P IV G D L D LG +S +
Sbjct: 215 RYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIR 274
Query: 373 GIIRRDELV-FMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWF 429
G E V ++K+ +P+++L GGY ++ AR L + + PY+ +F
Sbjct: 275 G---HGECVEYVKSFN--IPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYF 329
Query: 430 IYY 432
Y+
Sbjct: 330 EYF 332
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 76/303 (25%), Positives = 129/303 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-----------SFNVAAISEVCPLVAVPNYFVQK 211
+ +P + S+ + H+E Y+ L+ S N + + CP+ P F +
Sbjct: 47 VFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVF--PGLF-EF 103
Query: 212 CYLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADISL-LVKL 267
C RY G +L+ G L +IN GG HHA + + GFC DI + +++L
Sbjct: 104 C----SRY-TGASLQ-GATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILEL 157
Query: 268 LFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC-ITSKAKEAI 315
L K + +D+D H G+G ++ F R+ F T + E+
Sbjct: 158 L---KYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESG 214
Query: 316 R--C-RIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQ 372
R C + L +DQ Y + + + + + P IV G D L D LG +S +
Sbjct: 215 RYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIR 274
Query: 373 GIIRRDELV-FMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWF 429
G E V ++K+ +P+++L GGY ++ AR L + + PY+ +F
Sbjct: 275 G---HGECVEYVKSFN--IPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYF 329
Query: 430 IYY 432
Y+
Sbjct: 330 EYF 332
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 76/303 (25%), Positives = 129/303 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-----------SFNVAAISEVCPLVAVPNYFVQK 211
+ +P + S+ + H+E Y+ L+ S N + + CP+ P F +
Sbjct: 47 VFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVF--PGLF-EF 103
Query: 212 CYLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADISL-LVKL 267
C RY G +L+ G L +IN GG HHA + + GFC DI + +++L
Sbjct: 104 C----SRY-TGASLQ-GATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILEL 157
Query: 268 LFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC-ITSKAKEAI 315
L K + +D+D H G+G ++ F R+ F T + E+
Sbjct: 158 L---KYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESG 214
Query: 316 R--C-RIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQ 372
R C + L +DQ Y + + + + + P IV G D L D LG +S +
Sbjct: 215 RYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIR 274
Query: 373 GIIRRDELV-FMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWF 429
G E V ++K+ +P+++L GGY ++ AR L + + PY+ +F
Sbjct: 275 G---HGECVEYVKSFN--IPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYF 329
Query: 430 IYY 432
Y+
Sbjct: 330 EYF 332
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 76/303 (25%), Positives = 129/303 (42%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKW-----------SFNVAAISEVCPLVAVPNYFVQK 211
+ +P + S+ + H+E Y+ L+ S N + + CP+ P F +
Sbjct: 47 VFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVF--PGLF-EF 103
Query: 212 CYLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADISL-LVKL 267
C RY G +L+ G L +IN GG HHA + + GFC DI + +++L
Sbjct: 104 C----SRY-TGASLQ-GATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILEL 157
Query: 268 LFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMETC-ITSKAKEAI 315
L K + +D+D H G+G ++ F R+ F T + E+
Sbjct: 158 L---KYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESG 214
Query: 316 R--C-RIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQ 372
R C + L +DQ Y + + + + + P IV G D L D LG +S +
Sbjct: 215 RYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIR 274
Query: 373 GIIRRDELV-FMKARERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWF 429
G E V ++K+ +P+++L GGY ++ AR L + + PY+ +F
Sbjct: 275 G---HGECVEYVKSFN--IPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYF 329
Query: 430 IYY 432
Y+
Sbjct: 330 EYF 332
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 145 (56.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 72/312 (23%), Positives = 131/312 (41%)
Query: 115 YRPEYNVHF-FKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQ 173
Y P + HF K+ H K L H+ + K + ++ E + + ++
Sbjct: 24 YSPRVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIM---DLYETRSATRDE 80
Query: 174 LLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV-QKCYLRPMRY-----HVGGTLEA 227
LL H+E Y+ L + +++ P + N+ + C + Y + G +L+A
Sbjct: 81 LLQFHSEDYVNFLS-KVSPENANKL-PRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDA 138
Query: 228 G--FLALRRGWSINIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSISTAMIVDLDA 284
+ + +IN GG HHA + GFC DI L ++ LL I + +D+D
Sbjct: 139 TRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRI---LYIDIDL 195
Query: 285 HQGNGYEKDFMNETRIFIME---------------TCITSKAKEAIRCRIELAPYTEDQH 329
H G+G ++ F R+F + T I + + L +D
Sbjct: 196 HHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDS 255
Query: 330 YLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELV-FMKARER 388
Y+ ++ ++ + +F P +IV G D L +D LG ++ I E V F+K+
Sbjct: 256 YINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLGCFNLN---IKAHGECVKFVKSFG- 311
Query: 389 RVPIVMLTSGGY 400
+P++++ GGY
Sbjct: 312 -LPMLVVGGGGY 322
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 124 (48.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
+IN GG+HHA + + GFC Y + ++L L + K + VDLD H G+G E F
Sbjct: 134 AINWSGGWHHAKKDEASGFC-YLNDAVLGILRLRRK-FDRILYVDLDLHHGDGVEDAFSF 191
Query: 297 ETRI-----------FIMETCITSKAK----EAIRCRIELAPYTEDQHYLEKIEAGLERS 341
+++ F T S + + +D+ Y E+ L+
Sbjct: 192 TSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEV 251
Query: 342 LRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY- 400
+F P +V G D + DP+ ++P GI + L ++ + I+ +GGY
Sbjct: 252 YIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKC--LKYILQWQLATLILGGETGGYN 309
Query: 401 LKQTAR 406
L TAR
Sbjct: 310 LANTAR 315
Score = 62 (26.9 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 97 EITSEPQESVVTRPWPIVYRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAK 156
E EP ES + P +Y PEY L K+ P K+ + + L+EA
Sbjct: 2 EEPEEPAESGQSLPPVYIYSPEYVSMCDSLAKV-P---KRASMVHS---------LIEAY 48
Query: 157 FI-TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
+ Q I++P+ S E++ HT+ YL+ L+
Sbjct: 49 ALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ 80
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 129 (50.5 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 48/186 (25%), Positives = 80/186 (43%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
+IN GG+HHA + + GFC Y + ++L L + K + VDLD H G+G E F
Sbjct: 134 AINWSGGWHHAKKDEASGFC-YLNDAVLGILRLRRK-FDRILYVDLDLHHGDGVEDAFSF 191
Query: 297 ETRI-----------FIMETCITSKAK----EAIRCRIELAPYTEDQHYLEKIEAGLERS 341
+++ F T S + + +D+ Y E+ L+
Sbjct: 192 TSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEV 251
Query: 342 LRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY- 400
+F P +V G D + DP+ ++P GI + + + + + ++L GGY
Sbjct: 252 YIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYIL----QWELATLILGGGGYN 307
Query: 401 LKQTAR 406
L TAR
Sbjct: 308 LANTAR 313
Score = 56 (24.8 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 152 LVEAKFI-TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
L+EA + Q I++P+ S E++ HT+ YL+ L+
Sbjct: 44 LIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQ 80
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 128 (50.1 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 48/186 (25%), Positives = 80/186 (43%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
+IN GG+HHA + + GFC Y + ++L L + K + VDLD H G+G E F
Sbjct: 134 AINWSGGWHHAKKDEASGFC-YLNDAVLGILRLRRK-FDRILYVDLDLHHGDGVEDAFSF 191
Query: 297 ETRI-----------FIMETCITSKAK----EAIRCRIELAPYTEDQHYLEKIEAGLERS 341
+++ F T S + + +D+ Y E+ L+
Sbjct: 192 TSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEV 251
Query: 342 LRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY- 400
+F P +V G D + DP+ ++P GI + + + + + ++L GGY
Sbjct: 252 YIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYIL----QWELATLILGGGGYN 307
Query: 401 LKQTAR 406
L TAR
Sbjct: 308 LANTAR 313
Score = 56 (24.8 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 152 LVEAKFI-TQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
L+EA + Q I++P+ S E++ HT+ YL+ L+
Sbjct: 44 LIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQ 80
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 131 (51.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 35/140 (25%), Positives = 70/140 (50%)
Query: 167 QEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLE 226
+E + E++L H+E +LK ++ + +++ + + +V + GGT+E
Sbjct: 185 REATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIE 244
Query: 227 AGFLAL----RRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS--KSISTAMIV 280
A + + +I G HHA GFC ++++++ K + ++ +S+ +IV
Sbjct: 245 ACKAVIEGRVKNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIV 303
Query: 281 DLDAHQGNGYEKDFMNETRI 300
D D H GNG +K F N+ R+
Sbjct: 304 DWDIHHGNGTQKAFYNDPRV 323
Score = 62 (26.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 327 DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKAR 386
D Y+ ++ + F PD+I+ ++G D D +G ++P G + AR
Sbjct: 369 DGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLKGIAR 428
Query: 387 ERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRP 424
+ + ++ GGY + I+ S L +A + L+ P
Sbjct: 429 GK---LAVILEGGYNLDS---ISKSALAVAKV-LVGEP 459
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 131 (51.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 35/140 (25%), Positives = 70/140 (50%)
Query: 167 QEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLE 226
+E + E++L H+E +LK ++ + +++ + + +V + GGT+E
Sbjct: 185 REATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIE 244
Query: 227 AGFLAL----RRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQS--KSISTAMIV 280
A + + +I G HHA GFC ++++++ K + ++ +S+ +IV
Sbjct: 245 ACKAVIEGRVKNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIV 303
Query: 281 DLDAHQGNGYEKDFMNETRI 300
D D H GNG +K F N+ R+
Sbjct: 304 DWDIHHGNGTQKAFYNDPRV 323
Score = 62 (26.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 327 DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKAR 386
D Y+ ++ + F PD+I+ ++G D D +G ++P G + AR
Sbjct: 369 DGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLKGIAR 428
Query: 387 ERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRP 424
+ + ++ GGY + I+ S L +A + L+ P
Sbjct: 429 GK---LAVILEGGYNLDS---ISKSALAVAKV-LVGEP 459
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/186 (26%), Positives = 78/186 (41%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
+IN GG HHA + GFC DI L + L + + +D+D H G+G ++ F
Sbjct: 149 AINWSGGLHHAKRGEASGFCYVNDIVLAI--LNMLRFFPRVLYIDIDIHHGDGVQQAFYE 206
Query: 297 ETRI-----------FIMETCITS----KAKEAIRCRIELAPYTEDQHYLEKIEAGLERS 341
R+ F T K + + L D+ Y ++ +E +
Sbjct: 207 SDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPT 266
Query: 342 LRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY- 400
+ +F P IV G D L D LG+ +S I E V R +P++++ GGY
Sbjct: 267 INTFQPSAIVLQCGADSLGYDRLGVFNLS---IHAHGECVRF-TRSFNIPMLVVGGGGYT 322
Query: 401 LKQTAR 406
L+ AR
Sbjct: 323 LRNVAR 328
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/183 (27%), Positives = 77/183 (42%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME 304
HHA GFC + +I++ + + IVD D H GNG + F ++ +
Sbjct: 124 HHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDVHHGNGTQAAFRRNPQVLYVS 183
Query: 305 TCI------TSKAKEA---IRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAG 355
T T A+E I L T+ Y E + A ++ F P++++ +AG
Sbjct: 184 THQYPWYPGTGSAEETGVGNLVNIPLPAGTDSAAYREAVTATALPAIDRFRPELVLISAG 243
Query: 356 TDVLLNDPLGLLAISPQ--GIIRRDELVFMKARERRVPIVMLTSGGY-LKQTARIIADSI 412
D +DPL LA++ G I EL+ + R IV GGY L+ R A +
Sbjct: 244 FDAHRDDPLADLALTEDDYGWITA-ELMKLADRHSGGRIVSALEGGYALEALGRSAAAHL 302
Query: 413 LNL 415
L
Sbjct: 303 RTL 305
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 122 (48.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 48/201 (23%), Positives = 92/201 (45%)
Query: 115 YRPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKHIFNYLVEAKFITQ-DNI------IEPQ 167
Y + +F+ HP D ++ I+ L + N L+ ++ D++ I +
Sbjct: 68 YHAKIFTSYFEYIDPHPEDPRRIYRIYKILAE---NGLINDPTLSGVDDLGDLMLKIPVR 124
Query: 168 EVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPN--YFVQKCYLRPMRYHVGGTL 225
+ E++L HT+++L+ ++ S + E+ + YF Y R GG +
Sbjct: 125 AATSEEILEVHTKEHLEFIE-STEKMSREELLKETEKGDSVYFNNDSYASA-RLPCGGAI 182
Query: 226 EAGFLALRRGWSIN----IGGGFHHASETKGGGFCAYADISLLVKLLFQS--KSISTAMI 279
EA A+ G N + HHA GGFC ++++++ K + ++ +S+ MI
Sbjct: 183 EA-CKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 280 VDLDAHQGNGYEKDFMNETRI 300
+D D H GNG +K F + ++
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQV 262
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 308 TSKAK-EAIRCRIELAPY--TEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPL 364
T + K E C I P D Y+ E + R F PD+++ ++G D D +
Sbjct: 287 TGEGKGEGFNCNITW-PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTI 345
Query: 365 GLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISRP 424
G ++P ++ AR + ++ GGY IA S L++A + LI P
Sbjct: 346 GQCHVTPSCYGHMTHMLKSLARGN---LCVVLEGGY---NLDAIARSALSVAKV-LIGEP 398
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 111 (44.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 35/164 (21%), Positives = 71/164 (43%)
Query: 146 KHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVP 205
+HI + + Q + P+ + +++ +AHT ++ +++ E+ +
Sbjct: 571 QHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREP-KELHDAAGIY 629
Query: 206 NYFVQKCYLRPMRYHVGGTLEAGFL-----ALRRGWS----INIGGGFHHASETKGGGFC 256
N YL P + TL AG + ++ RG S N+ HHA + GFC
Sbjct: 630 N----SVYLHPRTFDCA-TLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAEQDHPHGFC 684
Query: 257 AYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
+ ++++ + + + +IVD D H GNG + F + ++
Sbjct: 685 IFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKV 728
Score = 65 (27.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 26 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH 66
HHA + + G+C + +++L + + +I+D D H
Sbjct: 246 HHAMKAEYNGYCFFNNVALATQHALDVHKLQRILIIDYDVH 286
Score = 62 (26.9 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F P +++ +AG D + DPLG ++ +G + A R I++ GGY
Sbjct: 792 FNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGR---IIVCLEGGY 844
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 118 (46.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ K L +IS +IVDLD H GNG +
Sbjct: 1 LQNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQ 59
Query: 292 KDFMNETRI 300
+ F + I
Sbjct: 60 QAFYADPSI 68
Score = 94 (38.1 bits), Expect = 0.00075, P = 0.00075
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 13 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH 66
L+ G+++ G HHA E+ GFC + +++ K L +IS +IVDLD H
Sbjct: 1 LQNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVH 53
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 52/176 (29%), Positives = 80/176 (45%)
Query: 238 INIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNE 297
IN GG HHA + + GFC D+ LL++ L ++K ++ VD D H G+G EK F
Sbjct: 203 INWDGGRHHAFKQRASGFCYINDVVLLIQRLRKAK-LNKITYVDFDLHHGDGVEKAFQYS 261
Query: 298 TRI-----------FIMET-CITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSL-RS 344
+I F T ++ K+ I L +D +YLE I + + L
Sbjct: 262 KQIQTISVHLYEPGFFPGTGSLSDSRKDKNVVNIPLKHGCDD-NYLELIASKIVNPLIER 320
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
P+ ++ G D LL D ++ +G+ R + MK+ R I +L GGY
Sbjct: 321 HEPEALIIECGGDGLLGDRFNEWQLTIRGL-SRIIINIMKSYPR-AHIFLLGGGGY 374
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 130 (50.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV 209
N L+ + I P + + E++ H+++Y+K L+ S +SE + N
Sbjct: 41 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLR-SIRPDNMSEYSKQMQRFNVG- 98
Query: 210 QKC-----YLRPMRYHVGGTLEAGFLALRR---GWSINIGGGFHHASETKGGGFCAYADI 261
+ C + GG++ AG + L R ++N GG HHA +++ GFC DI
Sbjct: 99 EDCPVFDGLFEFCQLSTGGSV-AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDI 157
Query: 262 SLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
L + L K + +D+D H G+G E+ F R+
Sbjct: 158 VLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYTTDRV 194
Score = 53 (23.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 390 VPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWFIYY 432
+P++ML GGY ++ AR D + + PYN +F Y+
Sbjct: 294 LPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYF 338
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 86 (35.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 32/133 (24%), Positives = 53/133 (39%)
Query: 171 EEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFL 230
+E+L++ H+ +Y+ ++ ++E V Y YL P Y L
Sbjct: 138 KEELMLVHSLEYIDLME---TTQYMNEGELRVLADTY--DSVYLHPNSYSCACLASGSVL 192
Query: 231 AL---------RRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVD 281
L R G +I G HHA + G+C + +++ + Q I +IVD
Sbjct: 193 RLVDAVLGAEIRNGMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 251
Query: 282 LDAHQGNGYEKDF 294
D H G G + F
Sbjct: 252 WDVHHGQGTQFTF 264
Score = 85 (35.0 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F P++++ +AG D DPLG +SP+G L+ A R I+++ GGY
Sbjct: 730 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGR---IILILEGGY 782
Score = 79 (32.9 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 30/108 (27%), Positives = 45/108 (41%)
Query: 13 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH--QFSD 70
+R G +I G HHA + G+C + +++ + Q I +IVD D H Q +
Sbjct: 203 IRNGMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQ 261
Query: 71 YYF---PSA--HSIKRKRKVEFLKERKALEDEITS--EPQESVVTRPW 111
+ F PS SI R + F KA T + Q + PW
Sbjct: 262 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPW 309
Score = 74 (31.1 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSIS----TAMIVDLDAHQGNGYEKDFMNETRI 300
HHA + GFC + +++ + +++IS +IVD D H GNG + F ++ +
Sbjct: 610 HHAEQDAACGFCFFNSVAVAAR---HAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSV 666
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 86 (35.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 32/133 (24%), Positives = 53/133 (39%)
Query: 171 EEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFL 230
+E+L++ H+ +Y+ ++ ++E V Y YL P Y L
Sbjct: 152 KEELMLVHSLEYIDLME---TTQYMNEGELRVLADTY--DSVYLHPNSYSCACLASGSVL 206
Query: 231 AL---------RRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVD 281
L R G +I G HHA + G+C + +++ + Q I +IVD
Sbjct: 207 RLVDAVLGAEIRNGMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 265
Query: 282 LDAHQGNGYEKDF 294
D H G G + F
Sbjct: 266 WDVHHGQGTQFTF 278
Score = 85 (35.0 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F P++++ +AG D DPLG +SP+G L+ A R I+++ GGY
Sbjct: 744 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGR---IILILEGGY 796
Score = 79 (32.9 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 30/108 (27%), Positives = 45/108 (41%)
Query: 13 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH--QFSD 70
+R G +I G HHA + G+C + +++ + Q I +IVD D H Q +
Sbjct: 217 IRNGMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQ 275
Query: 71 YYF---PSA--HSIKRKRKVEFLKERKALEDEITS--EPQESVVTRPW 111
+ F PS SI R + F KA T + Q + PW
Sbjct: 276 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPW 323
Score = 74 (31.1 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSIS----TAMIVDLDAHQGNGYEKDFMNETRI 300
HHA + GFC + +++ + +++IS +IVD D H GNG + F ++ +
Sbjct: 624 HHAEQDAACGFCFFNSVAVAAR---HAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSV 680
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 87 (35.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
+R G +I G HHA + G+C + +++ + Q +I +IVD D H G G +
Sbjct: 217 IRNGMAIVRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQ 275
Query: 292 KDF 294
F
Sbjct: 276 FTF 278
Score = 86 (35.3 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F P++++ +AG D DPLG +SP+G L+ A R +V++ GGY
Sbjct: 743 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGR---VVLILEGGY 795
Score = 76 (31.8 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 26/88 (29%), Positives = 40/88 (45%)
Query: 13 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH--QFSD 70
+R G +I G HHA + G+C + +++ + Q +I +IVD D H Q +
Sbjct: 217 IRNGMAIVRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQ 275
Query: 71 YYF---PSA--HSIKRKRKVEFLKERKA 93
+ F PS SI R + F KA
Sbjct: 276 FTFDQDPSVLYFSIHRYEQGRFWPHLKA 303
Score = 71 (30.1 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSIS----TAMIVDLDAHQGNGYEKDFMNETRI 300
HHA GFC + +++ + +++IS +IVD D H GNG + F + +
Sbjct: 623 HHAERDAACGFCFFNSVAVAAR---HAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSV 679
Score = 42 (19.8 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 88 LKERKALEDEITSEPQ-ESVVTRPW 111
++ +ALE++I E + E RPW
Sbjct: 453 VRSAEALEEDILEEEKAEKEEERPW 477
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 104 (41.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSK---SISTAMIVDLDAHQGNGYEKDFMNETRIF 301
HHA + GFC + ++++ L + + +IVD D H GNG +K F ++R+
Sbjct: 190 HHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVL 249
Query: 302 I 302
I
Sbjct: 250 I 250
Score = 82 (33.9 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 343 RSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARE-RRVPIVMLTSGGY 400
+ F PDII+ +AG D + DPLG ++P G ++ K E IV+ GGY
Sbjct: 310 KEFKPDIILLSAGFDAAIGDPLGGCCVTPYGY----SVMLKKLMEFAHGKIVLALEGGY 364
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSISTAMIVDLDAHQGNGYEKDFM 295
+IN GG HHA + + GFC DI + +++LL K + +D+D H G+G ++ F
Sbjct: 126 AINWAGGLHHAKKFEASGFCYVNDIVIGILELL---KYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 296 NETRI-----------FIMETC-ITSKAKEAIR--C-RIELAPYTEDQHYLEKIEAGLER 340
R+ F T + E+ R C + L +DQ Y + + +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQ 242
Query: 341 SLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELV-FMKARERRVPIVMLTSGG 399
+ + P IV G D L D LG +S +G E V ++K+ +P+++L GG
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRG---HGECVEYVKSFN--IPLLVLGGGG 297
Query: 400 Y-LKQTARIIADSILNLADLGLISR-PYNIWFIYY 432
Y ++ AR L + + PY+ +F Y+
Sbjct: 298 YTVRNVARCWTYETSLLVEEAISEELPYSEYFEYF 332
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 111 (44.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 39/139 (28%), Positives = 60/139 (43%)
Query: 166 PQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTL 225
P VSE LL+ HT +Y++ L E C + A F+ G TL
Sbjct: 69 PAIVSE--LLMFHTSEYIEKL---VEADKSGERCEIAA--GTFMSPGSWEAALLAAGTTL 121
Query: 226 EAGFLAL----RRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVD 281
A L + +++ G HH+ T+ G+C + +L VKL S S S ++D
Sbjct: 122 SAMQHILDCHGKIAYALVRPPG-HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVID 180
Query: 282 LDAHQGNGYEKDFMNETRI 300
+D H GNG + F ++
Sbjct: 181 IDVHYGNGTAEGFYTSDKV 199
Score = 67 (28.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 325 TEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMK 384
T D+ Y + + ++R F PD++V G D DP G +++ G R +++
Sbjct: 242 TGDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGV 301
Query: 385 ARER-RVPIVMLTSGGY 400
A E ++M+ GGY
Sbjct: 302 AEEHSHGRLLMVQEGGY 318
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 70/295 (23%), Positives = 124/295 (42%)
Query: 130 HPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWS 189
HP + K+ I + L + +Y+V +F + + + + L +AHT++++ +
Sbjct: 20 HPENGKRLTAISDQLIRSGLDYVVR-QF-------DSKPIDKSLLALAHTQEHIDFV--F 69
Query: 190 FNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGF----- 244
N E V + +K L + Y G ++A L + G +G F
Sbjct: 70 DNAPNEGEENFTVGEDSVMNEKT-LTSIMYSAGAAVDAVDLVME-G---TLGAAFCATRP 124
Query: 245 --HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEK---DFMNETR 299
HHA KG GFC + ++++ Q + IVD D H GNG E + N T
Sbjct: 125 PGHHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTEDIITNHFNATP 184
Query: 300 ------IFIME---TCITSKAKEAIRCRI---ELAPYTEDQHYLEKIEAGLERSLRSFCP 347
+F + +E+ I LA T+ + + EK+ A +L F P
Sbjct: 185 EDDKGYLFCSSYQYPLYPFEIQESDTPPIINTPLAATTKGEQFREKLTAHWLPALHKFKP 244
Query: 348 DIIVYNAGTDVLLNDPLGLLAISPQGIIR--RDELVFMKARERRVPIVMLTSGGY 400
++I+ +AG D + D + ++++ + R DEL + + IV + GGY
Sbjct: 245 ELILISAGFDAHIEDEMSHVSLT-EADYRWITDELKIIAEEYGKGRIVSVLEGGY 298
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 70/295 (23%), Positives = 124/295 (42%)
Query: 130 HPFDSKKWKHIFNYLWKHIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWS 189
HP + K+ I + L + +Y+V +F + + + + L +AHT++++ +
Sbjct: 20 HPENGKRLTAISDQLIRSGLDYVVR-QF-------DSKPIDKSLLALAHTQEHIDFV--F 69
Query: 190 FNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGF----- 244
N E V + +K L + Y G ++A L + G +G F
Sbjct: 70 DNAPNEGEENFTVGEDSVMNEKT-LTSIMYSAGAAVDAVDLVME-G---TLGAAFCATRP 124
Query: 245 --HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEK---DFMNETR 299
HHA KG GFC + ++++ Q + IVD D H GNG E + N T
Sbjct: 125 PGHHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTEDIITNHFNATP 184
Query: 300 ------IFIME---TCITSKAKEAIRCRI---ELAPYTEDQHYLEKIEAGLERSLRSFCP 347
+F + +E+ I LA T+ + + EK+ A +L F P
Sbjct: 185 EDDKGYLFCSSYQYPLYPFEIQESDTPPIINTPLAATTKGEQFREKLTAHWLPALHKFKP 244
Query: 348 DIIVYNAGTDVLLNDPLGLLAISPQGIIR--RDELVFMKARERRVPIVMLTSGGY 400
++I+ +AG D + D + ++++ + R DEL + + IV + GGY
Sbjct: 245 ELILISAGFDAHIEDEMSHVSLT-EADYRWITDELKIIAEEYGKGRIVSVLEGGY 298
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 135 (52.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 55/202 (27%), Positives = 88/202 (43%)
Query: 218 RYHVGGTLEAGFLALRR--GWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSIS 275
R + GG++ A R+ +IN GG HH + K GF D+ L + L KS
Sbjct: 118 RAYAGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELL--KSFK 175
Query: 276 TAMIVDLDAHQGNGYEKDFMNETRIFIM------ETCITSKAKEAIRCRIEL-APYTE-- 326
+ +++ G+ E+ F + R+ + +T S E L AP +
Sbjct: 176 RVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGDTGDISDYGEGKGQYYSLNAPLKDGL 235
Query: 327 DQHYLEKIEAG-LERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKA 385
D L + + R++ + P++IV G D L DP G +S +G D L ++
Sbjct: 236 DDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKG--HGDCLQYV-- 291
Query: 386 RERRVPIVMLTSGGY-LKQTAR 406
R VP+++L GGY L AR
Sbjct: 292 RSFNVPLMILGGGGYTLPNVAR 313
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 125 (49.1 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 33/140 (23%), Positives = 71/140 (50%)
Query: 167 QEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPN--YFVQKCYLRPMRYHVGGT 224
++ +E+++L+AH+E+YL+++K + + + E+ N YF Q Y + G T
Sbjct: 108 RQATEQEILLAHSEEYLEAVKQTPGMN-VEELMAFSKKYNDVYFHQNIY-HCAKLAAGAT 165
Query: 225 LEAGFLALRR----GWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIV 280
L+ ++R G ++ G HH+ + GFC + ++++ ++ +++ +IV
Sbjct: 166 LQLVDSVMKREVRNGMALVRPPG-HHSQRSAANGFCVFNNVAIAALYAKKNYNLNRILIV 224
Query: 281 DLDAHQGNGYEKDFMNETRI 300
D D H G G + F + +
Sbjct: 225 DWDVHHGQGIQYCFEEDPSV 244
Score = 59 (25.8 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQ 403
F P++++ +AG D + DP G + P+ L+ M ++ +V+ GGY L
Sbjct: 308 FDPELVIVSAGFDSAIGDPEGEMCALPEIFAHLTHLL-MPLAAGKMCVVL--EGGYNLTS 364
Query: 404 TARIIADSILNL 415
+ + ++ +L
Sbjct: 365 LGQSVCQTVHSL 376
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 133 (51.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 55/227 (24%), Positives = 93/227 (40%)
Query: 164 IEPQEVSEEQLLIAHTEKYLKSLKW-SFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVG 222
+EP+ V +L HT KY+ ++ F+ + +++V +Y Y VG
Sbjct: 45 VEPKRVGLGELEGFHTRKYISRVEEVGFSGGGWLDQDTVISVDSY-------ETALYAVG 97
Query: 223 GTLEA--GFLA--LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAM 278
G LE L+ L + + G HHA GFC + +++L +
Sbjct: 98 GVLEGVDKVLSGELESAFVMCRPPG-HHALPEASMGFCIFNNVALGALHALNKHRLKRVA 156
Query: 279 IVDLDAHQGNGYEKDFMNETRI------------FIMETCITSKAKEAIRCRIELAPYTE 326
+VD D H GNG + +N+ R+ F ++C + + I L
Sbjct: 157 VVDFDVHHGNGIQHVCLNDPRVTYISTHQIHHFPFTGDSCEDGPFQNILN--IPLPAGCG 214
Query: 327 DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQG 373
D HY + + + LR P++I+ AG D D +G + +S QG
Sbjct: 215 DSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQG 261
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 133 (51.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 55/227 (24%), Positives = 93/227 (40%)
Query: 164 IEPQEVSEEQLLIAHTEKYLKSLKW-SFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVG 222
+EP+ V +L HT KY+ ++ F+ + +++V +Y Y VG
Sbjct: 45 VEPKRVGLGELEGFHTRKYISRVEEVGFSGGGWLDQDTVISVDSY-------ETALYAVG 97
Query: 223 GTLEA--GFLA--LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAM 278
G LE L+ L + + G HHA GFC + +++L +
Sbjct: 98 GVLEGVDKVLSGELESAFVMCRPPG-HHALPEASMGFCIFNNVALGALHALNKHRLKRVA 156
Query: 279 IVDLDAHQGNGYEKDFMNETRI------------FIMETCITSKAKEAIRCRIELAPYTE 326
+VD D H GNG + +N+ R+ F ++C + + I L
Sbjct: 157 VVDFDVHHGNGIQHVCLNDPRVTYISTHQIHHFPFTGDSCEDGPFQNILN--IPLPAGCG 214
Query: 327 DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQG 373
D HY + + + LR P++I+ AG D D +G + +S QG
Sbjct: 215 DSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQG 261
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 135 (52.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 68/288 (23%), Positives = 124/288 (43%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFV-QKCYL-----RP 216
I P + + E++ H++ Y+K L++ ++SE + + + V Q C +
Sbjct: 41 IYRPHKANAEEMTKYHSDDYIKFLRF-IRPDSMSEY--IKQMQRFNVGQDCPVFNGLSEF 97
Query: 217 MRYHVGGTLEAGFLALRRGWS---INIGGGFHHASETKGGGFCAYADISLLVKLLFQSKS 273
+ GG++ A + L + + +N G HHA ++ GFC DI L + L K
Sbjct: 98 CQLSTGGSV-ASAVKLNKQQTDIAVNWAGDLHHAKNSEASGFCYVNDIVLAILELL--KY 154
Query: 274 ISTAMIVDLDAHQGNGYEKDFMNETRIFIMETC---ITSKAKE--AIRCRIELAPYT-ED 327
+ + +D+D H G+G E+ F + + +T ++ A + + Y D
Sbjct: 155 LQRVLCMDIDTHHGDGTEEAFYTADWVMTVSFHNFPVTGDLRDIGAGKGKYYAINYPLRD 214
Query: 328 QHYLEKIEAGLERSLRSFC-PDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKAR 386
E EA + + P +V G+D L D LG ++ +G + F+K+
Sbjct: 215 CIDDESCEAIFKPVMSKVMEPSAVVLQCGSDSLSGDWLGSFNLTIKG---HKCVGFVKSF 271
Query: 387 ERRVPIVMLTSGGY-LKQTARIIADSILNLADLGLISR-PYNIWFIYY 432
+P++ML GGY + AR D + + PYN +F Y+
Sbjct: 272 N--LPMLMLRGGGYTIHNVARCWTYETAVTLDTEIPNELPYNDYFEYF 317
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 58/233 (24%), Positives = 95/233 (40%)
Query: 220 HVGGTLEAGFLALRR--GWSINIGGGFHHASETKGGGFCAYADISL-LVKLLFQSKSIST 276
+ GGT++A + +IN GG HHA + GFC D+ L +++LL K
Sbjct: 109 YAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELL---KHHPR 165
Query: 277 AMIVDLDAHQGNGYEKDFMNETRIFIMETCI--------TSKAKEA-------IRCRIEL 321
+ +D+D H G+G E+ F R+ + T KE + L
Sbjct: 166 VLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPL 225
Query: 322 APYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELV 381
+D + + + + + P IV G D L D LG +S G + +
Sbjct: 226 KDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDG--HAECVK 283
Query: 382 FMKARERRVPIVMLTSGGYLKQT-ARIIADSILNLADLGLISR-PYNIWFIYY 432
F+K + +P+++ GGY K+ AR L D L + P N + Y+
Sbjct: 284 FVK--KFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENDYIKYF 334
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 119 (46.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ K L +IS +IVDLD H GNG +
Sbjct: 198 LKNGFAVVRPPG-HHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQ 256
Query: 292 KDFMNETRI 300
+ F + I
Sbjct: 257 QAFYADPSI 265
Score = 59 (25.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLND--PLG 365
L P D YLE + R F PD+++ +AG D L PLG
Sbjct: 306 LDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTPPLG 352
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 8/35 (22%), Positives = 20/35 (57%)
Query: 148 IFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKY 182
I++ L E + + I+ ++ S E++ + H+E +
Sbjct: 92 IWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHH 126
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 83 (34.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 30/108 (27%), Positives = 45/108 (41%)
Query: 13 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH--QFSD 70
+R G +I G HHA + G+C + ++L + Q + +IVD D H Q +
Sbjct: 213 IRNGMAIIRPPG-HHAQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQ 271
Query: 71 YYF---PSA--HSIKRKRKVEFLKERKALEDEITS--EPQESVVTRPW 111
+ F PS SI R + F KA T + Q + PW
Sbjct: 272 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPW 319
Score = 77 (32.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F P++++ +AG D DPLG +SP+ L+ A R I+++ GGY
Sbjct: 739 FNPELVLVSAGFDAARGDPLGGCQVSPECYAHLTHLLMGLANGR---IILILEGGY 791
Score = 71 (30.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSIS----TAMIVDLDAHQGNGYEKDFMNETRI 300
HHA GFC + +++ + +++IS +IVD D H GNG + F + +
Sbjct: 619 HHAERDSACGFCFFNSVAVAAR---HAQAISGHALRILIVDWDVHHGNGTQHLFEEDPSV 675
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 129 (50.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG +E F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 341 VRMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITTKLLQQKL 399
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
++ +IVD D H GNG ++ F N+ +
Sbjct: 400 NVGKVLIVDWDIHHGNGTQQAFYNDPSV 427
Score = 51 (23.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 470 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 529
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 530 LMTLAGGR-----VVLALEGGH 546
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 132 (51.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG +E F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 792 VRMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKL 850
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
S+ +IVD D H GNG ++ F N+ +
Sbjct: 851 SVGKVLIVDWDIHHGNGTQQAFYNDPSV 878
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/82 (23%), Positives = 35/82 (42%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 921 PPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 980
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 981 LMTLAGGR-----VVLALEGGH 997
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 127 (49.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 39/186 (20%), Positives = 80/186 (43%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIM- 303
HHA+ GG+C Y + + + ++ ++D+D H GNG + F + + +
Sbjct: 158 HHAAREYMGGYC-YLNNAAIAAQHAITRGARRVAVLDVDFHHGNGTQNIFYDRGDVLFVS 216
Query: 304 ---ETCIT------------SKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPD 348
+ ++ S A E + L T QHY + +E ++ LR+F P+
Sbjct: 217 LHGDPAVSYPYFSGHASERGSGAGEGCNLNLPLPKNTSWQHYRQALELACKQ-LRAFAPE 275
Query: 349 IIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARII 408
++V + G D +DP+ + + + +++ P + + GGY+ I
Sbjct: 276 LLVVSLGVDTFKDDPISHFLLESEDFLGMGQIIATVG----TPTLFVMEGGYMVDEIGIN 331
Query: 409 ADSILN 414
A ++L+
Sbjct: 332 AVNVLH 337
Score = 43 (20.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 163 IIEPQEVSEEQLLIAHTEKYLKSLK--WS 189
II P+ + AH+E+Y+ L+ WS
Sbjct: 47 IIGPRRFDRACYVAAHSERYVSFLENAWS 75
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 141 (54.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 73/286 (25%), Positives = 124/286 (43%)
Query: 152 LVEAK-FITQDNIIEPQEVSEEQLLIAHTEKYLKSL-KWSFN------VAA---ISEVCP 200
L+EA + +++P S E++ + HT+ YL+ L K S + +A + CP
Sbjct: 1043 LIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDDPQSADFGLGYDCP 1102
Query: 201 LV-AVPNYFVQKCYLRPMRYHVGG-TLEAG--FLALRRGWSINIGGGFHHASETKGGGFC 256
+V + +Y VGG TL A L + +IN GG+HHA + + GFC
Sbjct: 1103 VVEGIFDYAAA----------VGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGFC 1152
Query: 257 AYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI-----------FIMET 305
Y + ++L L + K + VD+D H G+G E F +++ F T
Sbjct: 1153 -YVNDAVLGILKLREK-YDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 1210
Query: 306 C-ITSKAKEAIRCRIELAPYTE---DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN 361
+T R P+ + D Y + + ++ F P+ +V G D +
Sbjct: 1211 GDVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAG 1270
Query: 362 DPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQTAR 406
DP+ ++ G+ + L ++ E +P ++L GGY L TAR
Sbjct: 1271 DPMCSFNMTSVGVAKC--LTYILGWE--LPTLLLGGGGYNLANTAR 1312
Score = 44 (20.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 86 EFLKERKALEDEITSEPQESVVTRPWP 112
+ L +K L + EP+E +T P P
Sbjct: 843 DLLAHQKHLTVGLPPEPREKTITAPLP 869
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 101 (40.6 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSK---SISTAMIVDLDAHQGNGYEKDFMNETRIF 301
HHA + GFC + ++++ VK+L Q+K + I+D D H GNG + F N+ +
Sbjct: 607 HHAEHEQAMGFCFFNNVAVAVKVL-QTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVL 665
Query: 302 IM 303
M
Sbjct: 666 YM 667
Score = 80 (33.2 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 327 DQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDP--LGLLAISPQ--GIIRRDELVF 382
D YL +E + SFCPD I+ +AG D P LG ++P+ G + + L +
Sbjct: 708 DPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTKSLLNY 767
Query: 383 MKARERRVPIVMLTSGGY 400
+ +V+ GGY
Sbjct: 768 ASGK-----VVLALEGGY 780
Score = 43 (20.2 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 148 IFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKY 182
I++ L+E + + + ++ S EQL + H++ Y
Sbjct: 493 IWSKLIEHGHVQKCEKVTAKKASLEQLQLVHSQTY 527
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 132 (51.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG LE F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 801 VRMAVGCLLELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKL 859
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
++ +IVD D H GNG ++ F N+ +
Sbjct: 860 NVGKVLIVDWDIHHGNGTQQAFYNDPSV 887
Score = 51 (23.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 930 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 989
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 990 LMTLAGGR-----VVLALEGGH 1006
Score = 39 (18.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 326 EDQHY--LEKIEAGLERSLR 343
+ +H+ ++K AGL RSLR
Sbjct: 1054 QSKHWSCVQKFAAGLGRSLR 1073
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 44/168 (26%), Positives = 74/168 (44%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNET------ 298
HHA GFC A+ +L ++ + ++ ++ +VD D H GNG E F+++
Sbjct: 147 HHALPDLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTIS 206
Query: 299 ----RIFIMETC-ITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYN 353
+F +++ I K + L P + Y E E + +L +F P++IV
Sbjct: 207 LHQDNLFPLDSGGIGVKGAGNSNINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLP 266
Query: 354 AGTDVLLNDPLGLLAISPQGIIRRDELVFMKARER-RVPIVMLTSGGY 400
G D DPLG+ +S + V A + + IV+ GGY
Sbjct: 267 CGYDASAVDPLGVCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGY 314
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 44/168 (26%), Positives = 74/168 (44%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNET------ 298
HHA GFC A+ +L ++ + ++ ++ +VD D H GNG E F+++
Sbjct: 147 HHALPDLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTIS 206
Query: 299 ----RIFIMETC-ITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYN 353
+F +++ I K + L P + Y E E + +L +F P++IV
Sbjct: 207 LHQDNLFPLDSGGIGVKGAGNSNINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLP 266
Query: 354 AGTDVLLNDPLGLLAISPQGIIRRDELVFMKARER-RVPIVMLTSGGY 400
G D DPLG+ +S + V A + + IV+ GGY
Sbjct: 267 CGYDASAVDPLGVCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGY 314
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 130 (50.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 49/173 (28%), Positives = 74/173 (42%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNG-----YEKDFMNETR 299
HHA GGFC + ++ + L ++ + A I+D+D H GNG YE+D +
Sbjct: 157 HHAFGDLAGGFCFLNNSAIAAERL-RAAGLRPA-ILDIDVHHGNGTQGIFYERDDVLTVS 214
Query: 300 IFI----METCITSKAKE-------AIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPD 348
I A+E + LA T D YL+ + L R + SF
Sbjct: 215 IHADPARFYPFFWGHAQERGAGRGLGYNLNLPLARGTGDDDYLDTLSVAL-RQVASFGSR 273
Query: 349 IIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYL 401
++V G D ++DP LAI+ G R + RVP++ + GGYL
Sbjct: 274 VLVVALGLDASIDDPFQGLAITQDGFAR----IGAALAGTRVPVLFVQEGGYL 322
Score = 37 (18.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 4/8 (50%), Positives = 8/8 (100%)
Query: 132 FDSKKWKH 139
FD+++W+H
Sbjct: 5 FDTRQWRH 12
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 127 (49.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ KLL Q S+S +IVD D H GNG +
Sbjct: 374 LKNGFAVVRPPG-HHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQ 432
Query: 292 KDFMNETRIFIM 303
+ F ++ + M
Sbjct: 433 QAFYSDPSVLYM 444
Score = 49 (22.3 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 482 LDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPL 527
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 130 (50.8 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ KLL Q ++S +IVD D H GNG +
Sbjct: 782 LKNGFAVVRPPG-HHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIVDWDVHHGNGTQ 840
Query: 292 KDFMNETRIFIM 303
+ F N+ + M
Sbjct: 841 QAFYNDPNVLYM 852
Score = 51 (23.0 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 890 LEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPL 935
Score = 41 (19.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 57 TAMIVDLDA-HQFSDYYFPSAHSIKRKRKVEFLKERKALEDEI 98
TA+ +DL HQFS P+ + ++++ LK+++ ++ +I
Sbjct: 45 TAVPMDLRLDHQFSLPLEPALREQQLQQELLALKQKQQIQRQI 87
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 127 (49.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG +E F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 505 VRMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKL 563
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
S+ +IVD D H GNG ++ F ++ +
Sbjct: 564 SVGKVLIVDWDIHHGNGTQQAFYDDPSV 591
Score = 51 (23.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 634 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 693
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 694 LMTLAGGR-----VVLALEGGH 710
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 49/199 (24%), Positives = 85/199 (42%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
++N GG HH ++ GFC D+ L + +L K++ + +DLD H G+G E F
Sbjct: 193 AVNWYGGRHHCHKSHAAGFCYVNDVVLSINIL--RKNLGSVFYLDLDLHHGDGVENAFKF 250
Query: 297 ETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERS-------------LR 343
++ TC + + + Y E GL S +
Sbjct: 251 SKKV---ATCSIHRYDIGFYPGTGSLKSSRENTYNIPTEKGLNDSSMLWIIKEIVAPLIS 307
Query: 344 SFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLK- 402
+F P IV G D L D ++ +G RD + ++ + +PI++L GGY
Sbjct: 308 NFGPRAIVIQCGCDGLALDTHKEWNMTIKGY--RDSIDWILSHFSEIPIMLLGGGGYSHT 365
Query: 403 QTARI---IADSILNLADL 418
+TA+ + S+L ++D+
Sbjct: 366 ETAKCWTYLTGSVLGVSDI 384
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 49/199 (24%), Positives = 85/199 (42%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
++N GG HH ++ GFC D+ L + +L K++ + +DLD H G+G E F
Sbjct: 193 AVNWYGGRHHCHKSHAAGFCYVNDVVLSINIL--RKNLGSVFYLDLDLHHGDGVENAFKF 250
Query: 297 ETRIFIMETCITSKAKEAIRCRIELAPYTEDQHYLEKIEAGLERS-------------LR 343
++ TC + + + Y E GL S +
Sbjct: 251 SKKV---ATCSIHRYDIGFYPGTGSLKSSRENTYNIPTEKGLNDSSMLWIIKEIVAPLIS 307
Query: 344 SFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLK- 402
+F P IV G D L D ++ +G RD + ++ + +PI++L GGY
Sbjct: 308 NFGPRAIVIQCGCDGLALDTHKEWNMTIKGY--RDSIDWILSHFSEIPIMLLGGGGYSHT 365
Query: 403 QTARI---IADSILNLADL 418
+TA+ + S+L ++D+
Sbjct: 366 ETAKCWTYLTGSVLGVSDI 384
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 129 (50.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG +E F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 769 VRMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITTKLLQQKL 827
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
++ +IVD D H GNG ++ F N+ +
Sbjct: 828 NVGKVLIVDWDIHHGNGTQQAFYNDPSV 855
Score = 51 (23.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 898 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 957
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 958 LMTLAGGR-----VVLALEGGH 974
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 131 (51.2 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ KLL Q ++S +IVD D H GNG +
Sbjct: 783 LKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQ 841
Query: 292 KDFMNETRIFIM 303
+ F N+ + M
Sbjct: 842 QAFYNDPNVLYM 853
Score = 50 (22.7 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 891 LDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPL 936
Score = 40 (19.1 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 42 ISLLVKLLFQSKSISTAMIVDLDAHQFSDYYFPSAHSIKRKRKVEFLKERKALEDEI 98
+ + L Q + M + LD HQFS P+ + ++++ LK+++ ++ +I
Sbjct: 32 VDVATALPLQVAPAAVPMDLRLD-HQFSLPLEPALREQQLQQELLALKQKQQIQRQI 87
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 50/236 (21%), Positives = 95/236 (40%)
Query: 146 KHIFNYLVEAKFITQDNIIEPQE-VSEEQLLIAHTEKYLKSLKWSFNVAA--ISEVCPLV 202
K F L++ +T ++ E V+E + H+E YL K + E P
Sbjct: 22 KRRFKSLMDVSGLTAQLSVQSAEPVTETDMARVHSEAYLDRFKTLSDAGGGNAGEFSPFG 81
Query: 203 AVPNYFVQKCYLRPMRYHVGGTLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADIS 262
+ +Y + ++ V ++ F ++++ G HHA GFC A+I+
Sbjct: 82 S-GSYEIAALSAGLVKRAVFDVVDGTF---DNAYALSRPPG-HHAMRDGSMGFCLLANIA 136
Query: 263 LLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIM----ETCIT---------- 308
+ ++ + ++ ++D D H GNG + F + + E C
Sbjct: 137 IAIEAARAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQENCFPPGSGSGSERG 196
Query: 309 SKAKEAIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPL 364
+ A E + L P Q Y++ ++ + +L +F P++I+ G D DPL
Sbjct: 197 AGAGEGANLNVNLLPGAGHQSYIDAMDILVLPALHAFRPELIIVACGLDANNFDPL 252
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 119 (46.9 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ K L +IS +IVDLD H GNG +
Sbjct: 770 LKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQ 828
Query: 292 KDFMNETRI 300
+ F + I
Sbjct: 829 QAFYADPSI 837
Score = 58 (25.5 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLND--PLG 365
L P D YLE ++ + F PD+++ +AG D L PLG
Sbjct: 878 LDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLG 924
Score = 44 (20.5 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 152 LVEAKFITQDNI-IEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAV 204
+V K + Q+ + I+ Q+ ++QLLIA +K ++L + L+A+
Sbjct: 40 VVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAI 93
Score = 40 (19.1 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 79 IKRKRKVEFLKERKALEDEITSEPQESVVTRP 110
+K+K + EFL + A +D T+ SV P
Sbjct: 143 VKQKLQ-EFLLSKSATKDTPTNGKNHSVSRHP 173
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 148 IFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFN 191
I++ L E + + I+ ++ S E++ + H+E + SL + N
Sbjct: 664 IWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHH--SLLYGTN 705
Score = 37 (18.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 161 DNIIEPQEVSEEQLLIAHTEKYLKSL 186
D ++ +++ +E LLI ++ K L
Sbjct: 38 DPVVREKQLQQELLLIQQQQQIQKQL 63
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 129 (50.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG +E F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 796 VRMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITTKLLQQKL 854
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
++ +IVD D H GNG ++ F N+ +
Sbjct: 855 NVGKVLIVDWDIHHGNGTQQAFYNDPSV 882
Score = 51 (23.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 925 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 984
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 985 LMTLAGGR-----VVLALEGGH 1001
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 127 (49.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG +E F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 587 VRMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKL 645
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
S+ +IVD D H GNG ++ F ++ +
Sbjct: 646 SVGKVLIVDWDIHHGNGTQQAFYDDPSV 673
Score = 51 (23.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 716 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 775
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 776 LMTLAGGR-----VVLALEGGH 792
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 127 (49.8 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG +E F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 587 VRMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKL 645
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
S+ +IVD D H GNG ++ F ++ +
Sbjct: 646 SVGKVLIVDWDIHHGNGTQQAFYDDPSV 673
Score = 51 (23.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 716 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 775
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 776 LMTLAGGR-----VVLALEGGH 792
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 129 (50.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG +E F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 804 VRMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITTKLLQQKL 862
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
++ +IVD D H GNG ++ F N+ +
Sbjct: 863 NVGKVLIVDWDIHHGNGTQQAFYNDPSV 890
Score = 51 (23.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 933 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 992
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 993 LMTLAGGR-----VVLALEGGH 1009
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 130 (50.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ KLL Q S+S ++VD D H GNG +
Sbjct: 790 LKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKTLVVDWDVHHGNGTQ 848
Query: 292 KDFMNETRI 300
+ F ++ R+
Sbjct: 849 QAFYSDPRV 857
Score = 49 (22.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 898 LDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPL 943
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 94 (38.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 32/131 (24%), Positives = 59/131 (45%)
Query: 171 EEQLLIAHTEKYLKSLKWS--FN---VAAISEVCPLVAV-PNYFVQKCYLRPMRYH-VGG 223
+E+L++ H+ +Y+ ++ + N + +++ V + PN + C V
Sbjct: 138 KEELMLVHSLEYIDLMETTQYMNEEELHVLADTYDSVYLHPNSYTCACLASGSVLRLVDA 197
Query: 224 TLEAGFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLD 283
LEA +R G +I G HHA + G+C + +++ + Q I +IVD D
Sbjct: 198 VLEA---EIRNGMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWD 253
Query: 284 AHQGNGYEKDF 294
H G G + F
Sbjct: 254 VHHGQGIQFAF 264
Score = 80 (33.2 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 30/108 (27%), Positives = 44/108 (40%)
Query: 13 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH-----Q 67
+R G +I G HHA + G+C + +++ + Q I +IVD D H Q
Sbjct: 203 IRNGMAIIRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQ 261
Query: 68 FSDYYFPSA--HSIKRKRKVEFLKERKALEDEITS--EPQESVVTRPW 111
F+ PS SI R + F KA T + Q + PW
Sbjct: 262 FAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPW 309
Score = 75 (31.5 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F P++++ +AG D DPLG +SP+G + A I+++ GGY
Sbjct: 730 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLANGH---IILILEGGY 782
Score = 69 (29.3 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSIS----TAMIVDLDAHQGNGYEKDFMNETRI 300
HHA GFC + +++ + +++IS +IVD D H GNG + F + +
Sbjct: 610 HHAEPDAACGFCFFNSVAVAAR---HAQAISGHALRILIVDWDIHHGNGTQHIFEEDPSV 666
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 132 (51.5 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG LE F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 801 VRMAVGCLLELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKL 859
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
++ +IVD D H GNG ++ F N+ +
Sbjct: 860 NVGKVLIVDWDIHHGNGTQQAFYNDPSV 887
Score = 51 (23.0 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 930 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 989
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 990 LMTLAGGR-----VVLALEGGH 1006
Score = 39 (18.8 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 326 EDQHY--LEKIEAGLERSLR 343
+ +H+ ++K AGL RSLR
Sbjct: 1054 QSKHWSCVQKFAAGLGRSLR 1073
Score = 37 (18.1 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 58 AMIVDLDAHQFSDYYFPSAHSI 79
A+ +D ++QFS Y PS +I
Sbjct: 351 ALPLDSSSNQFSLYTSPSLPNI 372
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 128 (50.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 218 RYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKS 273
R VG +E F L+ G+++ G HHA E+ GFC + +++ KLL Q +
Sbjct: 742 RLAVGCVIELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLN 800
Query: 274 ISTAMIVDLDAHQGNGYEKDFMNETRI 300
+S +IVD D H GNG ++ F N+ +
Sbjct: 801 VSKILIVDWDVHHGNGTQQAFYNDPNV 827
Score = 50 (22.7 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 868 LDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPL 913
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 128 (50.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 218 RYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKS 273
R VG +E F L+ G+++ G HHA E+ GFC + +++ KLL Q +
Sbjct: 750 RLAVGCVIELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLN 808
Query: 274 ISTAMIVDLDAHQGNGYEKDFMNETRI 300
+S +IVD D H GNG ++ F N+ +
Sbjct: 809 VSKILIVDWDVHHGNGTQQAFYNDPNV 835
Score = 50 (22.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 876 LDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPL 921
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 128 (50.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 218 RYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKS 273
R VG +E F L+ G+++ G HHA E+ GFC + +++ KLL Q +
Sbjct: 759 RLAVGCVIELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLN 817
Query: 274 ISTAMIVDLDAHQGNGYEKDFMNETRI 300
+S +IVD D H GNG ++ F N+ +
Sbjct: 818 VSKILIVDWDVHHGNGTQQAFYNDPNV 844
Score = 50 (22.7 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 885 LDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPL 930
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 113 (44.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 35/146 (23%), Positives = 66/146 (45%)
Query: 164 IEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYH--- 220
+ P+E SE +L + H+ +Y+ L+ A+ + L A+ + Y P +H
Sbjct: 50 LAPREASEAELGLVHSPEYVSLLR---GTQAL-DTQELRALSGQY-DAVYFHPSTFHCAR 104
Query: 221 --VGGTLE---AGFL-ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSI 274
VG L+ A + A+ G ++ G HH+ GFC + ++++ + Q +
Sbjct: 105 LAVGAALQLVDAVLMGAVHNGLALVRPPG-HHSQRAAANGFCVFNNVAIAARHAQQKHGL 163
Query: 275 STAMIVDLDAHQGNGYEKDFMNETRI 300
+IVD D H G G + F ++ +
Sbjct: 164 QRILIVDWDVHHGQGIQYIFEDDPSV 189
Score = 61 (26.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY---- 400
F P++++ +AG D + DP G + +P+ +L+ + A R + + GGY
Sbjct: 253 FDPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLAGGR---VCAVLEGGYHLES 309
Query: 401 LKQTARIIADSIL 413
L Q+ ++ ++L
Sbjct: 310 LSQSVCMVVRALL 322
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 128 (50.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 218 RYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKS 273
R VG +E F L+ G+++ G HHA E+ GFC + +++ KLL Q +
Sbjct: 768 RLAVGCVIELVFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLN 826
Query: 274 ISTAMIVDLDAHQGNGYEKDFMNETRI 300
+S +IVD D H GNG ++ F N+ +
Sbjct: 827 VSKILIVDWDVHHGNGTQQAFYNDPNV 853
Score = 50 (22.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 894 LDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPL 939
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 81 (33.6 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F P++++ +AG D DPLG ++P+G L+ A R I+++ GGY
Sbjct: 732 FNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGR---IILILEGGY 784
Score = 72 (30.4 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 28/108 (25%), Positives = 44/108 (40%)
Query: 13 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH--QFSD 70
+R G ++ G HHA + G+C + +++ + + I +IVD D H Q +
Sbjct: 202 IRNGMAVIRPPG-HHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDVHHGQGTQ 260
Query: 71 YYF---PSA--HSIKRKRKVEFLKERKALEDEITS--EPQESVVTRPW 111
+ F PS SI R F KA T + Q + PW
Sbjct: 261 FIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPW 308
Score = 70 (29.7 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 245 HHASETKGGGFCAYADISLLVK--LLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
HHA GFC + +++ + + +++ +IVD D H GNG + F + +
Sbjct: 612 HHAEPDAACGFCFFNSVAVAARHAQVIAGRALRI-LIVDWDVHHGNGTQHIFEEDPSV 668
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 127 (49.8 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ KLL Q +S +IVD D H GNG +
Sbjct: 789 LKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLDVSKTLIVDWDVHHGNGTQ 847
Query: 292 KDFMNETRI 300
+ F N+ +
Sbjct: 848 QAFYNDPNV 856
Score = 50 (22.7 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 897 LDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPL 942
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 111 (44.1 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
++N GG HHA +++ GFC DI L + L K + +D+D H G+G E+ F
Sbjct: 107 AVNWAGGLHHAKKSEASGFCYVNDIVLAILELL--KYHQRVLYIDIDIHHGDGVEEAFYT 164
Query: 297 ETRI 300
R+
Sbjct: 165 TDRV 168
Score = 44 (20.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 150 NYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLK 187
N L+ + I P + + E++ H++ Y+K L+
Sbjct: 40 NLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLR 77
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 119 (46.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ K L +IS +IVDLD H GNG +
Sbjct: 772 LKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQ 830
Query: 292 KDFMNETRI 300
+ F + I
Sbjct: 831 QAFYADPSI 839
Score = 56 (24.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLND--PLG 365
L P D YLE + + F PD+++ +AG D L PLG
Sbjct: 880 LDPPMGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLG 926
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 152 LVEAKFITQDNI-IEPQEVSEEQLLIAHTEKYLKSL 186
+V K + Q+ + I+ Q+ ++QLLIA +K ++L
Sbjct: 40 VVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENL 75
Score = 40 (19.1 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 79 IKRKRKVEFLKERKALEDEITSEPQESVVTRP 110
+K+K + EFL + A +D T+ SV P
Sbjct: 146 VKQKLQ-EFLLSKSATKDTPTNGKNHSVSRHP 176
Score = 38 (18.4 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 148 IFNYLVEAKFITQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFN 191
I++ L E + + I+ ++ S E++ + H+E + SL + N
Sbjct: 666 IWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHH--SLLYGTN 707
Score = 37 (18.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 161 DNIIEPQEVSEEQLLIAHTEKYLKSL 186
D ++ +++ +E LLI ++ K L
Sbjct: 38 DPVVREKQLQQELLLIQQQQQIQKQL 63
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 127 (49.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
L+ G+++ G HHA E+ GFC + +++ KLL Q S+S +IVD D H GNG +
Sbjct: 790 LKNGFAVVRPPG-HHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQ 848
Query: 292 KDFMNETRIFIM 303
+ F ++ + M
Sbjct: 849 QAFYSDPSVLYM 860
Score = 49 (22.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 898 LDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPL 943
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 111 (44.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 37/143 (25%), Positives = 64/143 (44%)
Query: 167 QEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYH-----V 221
+E SE +L + H+ +Y+ L+ + E L A+ + YL P +H V
Sbjct: 53 REASEAELGLVHSPEYVALLQGT-QALGTRE---LQALSKEY-DAVYLHPSTFHCARLAV 107
Query: 222 GGTLEA--GFL--ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTA 277
G L+ L A+R G ++ G HH+ GFC + ++++ K Q +
Sbjct: 108 GAALQLVDAVLTGAVRNGLALVRPPG-HHSQRATANGFCVFNNVAIAAKHAQQKHGLRRI 166
Query: 278 MIVDLDAHQGNGYEKDFMNETRI 300
+IVD D H G G + F ++ +
Sbjct: 167 LIVDWDVHHGQGIQYIFEDDPSV 189
Score = 61 (26.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F P++++ +AG D + DP G + +P+ L+ + A R + + GGY
Sbjct: 253 FDPELVLVSAGFDSAIGDPEGQMLATPECFAHLTHLLQVLAGGR---VCAVLEGGY 305
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 124 (48.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 217 MRYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSK 272
+R VG +E F L+ G++I G HHA E+ GFC + +++ KLL Q
Sbjct: 790 VRMAVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKL 848
Query: 273 SISTAMIVDLDAHQGNGYEKDFMNETRI 300
++ +IVD D H GNG ++ F ++ +
Sbjct: 849 NVGKVLIVDWDIHHGNGTQQAFYDDPSV 876
Score = 51 (23.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/82 (23%), Positives = 34/82 (41%)
Query: 323 PYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLN--DPLGLLAISPQ--GIIRRD 378
P D YL + F PD+++ +AG D + PLG +++ + G + R
Sbjct: 919 PPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQ 978
Query: 379 ELVFMKARERRVPIVMLTSGGY 400
+ R +V+ GG+
Sbjct: 979 LMTLAGGR-----VVLALEGGH 995
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 126 (49.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 232 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYE 291
LR G+++ G HHA E+ GFC + +++ KLL Q ++S +IVD D H GNG +
Sbjct: 729 LRNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQ 787
Query: 292 KDFMNETRIFIM 303
+ F ++ + +
Sbjct: 788 QAFYSDPNVLYL 799
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDP 363
L P D YL + + F PD+++ ++G D + P
Sbjct: 837 LEPPMGDADYLAAFTSVVMPIANEFSPDVVLVSSGFDAVEGHP 879
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 81 (33.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
F P++++ +AG D DPLG ++P+G L+ A R I+++ GGY
Sbjct: 729 FNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGR---IILILEGGY 781
Score = 73 (30.8 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 245 HHASETKGGGFCAYADISLLVK--LLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
HHA GFC + +++ + + +++ +IVD D H GNG + F ++ +
Sbjct: 609 HHAEPNAACGFCFFNSVAVAARHAQIIAGRALRI-LIVDWDVHHGNGTQHIFEDDPSV 665
Score = 66 (28.3 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 13 LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAH--QFSD 70
+R G ++ G HHA G+C + +++ + + I +IVD D H Q +
Sbjct: 202 IRNGMAVIRPPG-HHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQ 260
Query: 71 YYFPSAHSI 79
+ F S+
Sbjct: 261 FIFDQDPSV 269
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 91 (37.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/144 (22%), Positives = 66/144 (45%)
Query: 164 IEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYHVG- 222
I +E+++++L + HT +++ + V S++ + + + R R G
Sbjct: 198 INAREITKQELQMVHTSEHVDA------VDTTSQLLYSYFTSDTYANEYSARAARLAAGL 251
Query: 223 -GTLEAGFLA--LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMI 279
L ++ G+++ G HHA GFC + + ++ L+ Q+ +I
Sbjct: 252 CADLATDIFTGRVKNGFALVRPPG-HHAGVRHAMGFCLHNNAAVAA-LVAQAAGAKKVLI 309
Query: 280 VDLDAHQGNGYEKDF-MNETRIFI 302
VD D H GNG ++ F N++ ++I
Sbjct: 310 VDWDVHHGNGTQEIFEQNKSVLYI 333
Score = 78 (32.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 17/72 (23%), Positives = 37/72 (51%)
Query: 344 SFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGYLKQ 403
+F PD ++ +AG D DPLG ++P G R +++ + ++++ GGY +
Sbjct: 391 AFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGK---MLVILEGGYNLR 447
Query: 404 TARIIADSILNL 415
+ A +++ +
Sbjct: 448 SISASATAVIKV 459
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 105 (42.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 51/227 (22%), Positives = 95/227 (41%)
Query: 89 KERKALEDEITSEPQE-SVVTRPWPIVYRPEYNVHFFKLE-KLHPFDSKKWKHIFNYLWK 146
K E+ + +E E S + + + Y P H E HP D ++ +F + K
Sbjct: 34 KPMSGSENTLNNESHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEAIKK 93
Query: 147 --HIFNYLVEAKFITQDNIIEPQEVSEEQLLIAHT-EKY---LKSLKWSF-NVAAISEVC 199
++ N + + I +E + E+LL H+ E Y + K S ++A + ++
Sbjct: 94 AGYVSNVPSPSDVFLR---IPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKIS 150
Query: 200 PLVAVPNYFVQKCYLRPMRYHVGGTLEAGFLAL----RRGWSINIGGGFHHASETKGGGF 255
+ N + + R G +E + + +++ G HHA K GGF
Sbjct: 151 DSLYYNN---ESAFCA--RLACGSAIETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGF 204
Query: 256 CAYADISLLVKLLFQS--KSISTAMIVDLDAHQGNGYEKDFMNETRI 300
C + ++S+ + + Q I +IVD D H GNG + F ++ +
Sbjct: 205 CLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNV 251
Score = 64 (27.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY---- 400
F PD+++ + G D D +G ++P +++ M + +V I + GGY
Sbjct: 315 FDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQML-MGLADGKVFISL--EGGYNLDS 371
Query: 401 LKQTARIIADSILNL 415
+ +A +A S+L +
Sbjct: 372 ISTSALAVAQSLLGI 386
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 122 (48.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 218 RYHVGGTLEAGFLA----LRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKS 273
R VG +E F L+ G+++ G HHA E+ GFC + +++ KLL Q
Sbjct: 740 RLAVGCVVELAFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLH 798
Query: 274 ISTAMIVDLDAHQGNGYEKDFMNETRI 300
+S ++VD D H GNG ++ F ++ +
Sbjct: 799 VSKTLVVDWDVHHGNGTQQAFYSDPSV 825
Score = 50 (22.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 321 LAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL 366
L P D YL + F PD+++ ++G D + P L
Sbjct: 866 LDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPL 911
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 43/166 (25%), Positives = 73/166 (43%)
Query: 232 LRRGWSINIGGGFHHASETKGG-GFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGY 290
++ G+++ G H G GFC ++++ V L K + I+D D H G+G
Sbjct: 95 VKNGFALVRPPGHHATRTVYGNRGFCNINNVAITVDYLRWVKGVKKIAIIDTDVHHGDGT 154
Query: 291 EKDFMNETRI-FIM-----ETCI--TSKAKEA-------IRCRIELAPYTEDQHYLEKIE 335
+ F ++ + FI T T EA + L P + D+ L +E
Sbjct: 155 QDIFYHDPDVLFISLHQDGRTLYPGTGFIDEAGTPNAYGTTINLPLPPGSGDEEILYLLE 214
Query: 336 AGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELV 381
+ L F P+ I+ +AG D +DPL +A++ +G R EL+
Sbjct: 215 EAVLPILEEFQPEFIINSAGQDNHYSDPLARMAVTARGYGRITELI 260
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 102 (41.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 36/146 (24%), Positives = 62/146 (42%)
Query: 164 IEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYH--- 220
+ +E SEE+L + H+ +Y+ SL V E L A+ F Y P +H
Sbjct: 50 LSAREASEEELGLVHSPEYV-SLVRETQVLGKEE---LQALSGQF-DAIYFHPSTFHCAR 104
Query: 221 --VGGTLEA--GFL--ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSI 274
G L+ L A++ G ++ G HH GFC + ++++ Q +
Sbjct: 105 LAAGAGLQLVDAVLTGAVQNGLALVRPPG-HHGQRAAANGFCVFNNVAIAAAHAKQKHGL 163
Query: 275 STAMIVDLDAHQGNGYEKDFMNETRI 300
++VD D H G G + F ++ +
Sbjct: 164 HRILVVDWDVHHGQGIQYLFEDDPSV 189
Score = 66 (28.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQ 403
F P++++ +AG D + DP G + +P+ +L+ + A R + + GGY L+
Sbjct: 253 FDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGR---VCAVLEGGYHLES 309
Query: 404 TARIIADSILNL 415
A + ++ L
Sbjct: 310 LAESVCMTVQTL 321
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 114 (45.2 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 237 SINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMN 296
+IN GG HHA + + GFC DI L + L + M +D+D H G+G E+ F +
Sbjct: 166 AINWSGGLHHAKKAEASGFCYVNDIVLAILQLLRIHP--RVMYIDIDVHHGDGVEQAFWS 223
Query: 297 ETRI 300
R+
Sbjct: 224 TDRV 227
Score = 48 (22.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 326 EDQHYLEKIEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGL--LAISPQGIIRRDELVFM 383
+D+ Y++ + + + F P IV G D L D LG L ++ G + +
Sbjct: 273 DDESYVQLFKDVVGACVSKFRPAAIVLQCGADSLGCDRLGCFNLNVAAHGAC----VAYT 328
Query: 384 KARERRVPIVMLTSGGY 400
K +P++++ GGY
Sbjct: 329 KTFG--LPMLVVGGGGY 343
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 99 (39.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 34/142 (23%), Positives = 61/142 (42%)
Query: 168 EVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQKCYLRPMRYH-----VG 222
E SEE+L + H+ +Y+ ++ + + L A+ + Y P +H G
Sbjct: 54 EASEEELGLVHSPEYIALVQ---KTQTLDKE-ELHALSKQY-NAVYFHPDTFHCARLAAG 108
Query: 223 GTLEA--GFL--ALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAM 278
L+ L A+ G ++ G HH+ GFC + +++L K Q + +
Sbjct: 109 AALQLVDAVLTGAVHNGLALVRPPG-HHSQRAAANGFCVFNNVALAAKHAKQKYGLQRIL 167
Query: 279 IVDLDAHQGNGYEKDFMNETRI 300
IVD D H G G + F ++ +
Sbjct: 168 IVDWDVHHGQGIQYIFNDDPSV 189
Score = 66 (28.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 345 FCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY-LKQ 403
F P++++ +AG D + DP G + +P+ +L+ + A R I + GGY L+
Sbjct: 253 FDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGR---ICAVLEGGYHLES 309
Query: 404 TARIIADSILNL 415
A+ + + L
Sbjct: 310 LAQSVCMMVQTL 321
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 114 (45.2 bits), Expect = 0.00079, P = 0.00079
Identities = 44/167 (26%), Positives = 64/167 (38%)
Query: 245 HHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRIFIME 304
HHA GFC + + +L K + +VD D H GNG + +E R ++
Sbjct: 121 HHAERETAMGFCLFGNAALAAKHALDHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLIT 180
Query: 305 TCI------TSKAKE----AIRCRIELAPYTEDQHYLEKIEAGLERSLRSFCPDIIVYNA 354
+ + + E I LAP T A LR+F P++I+ +A
Sbjct: 181 SQQMPLWPGSGRPDEDGAHGQIVNIPLAPGTGGAEMRAAYMAQAFPRLRAFKPELIIISA 240
Query: 355 GTDVLLNDPLGLLAISPQGII-RRDELVFMKARERRVPIVMLTSGGY 400
G D +DPL L S EL + + IV GGY
Sbjct: 241 GFDAHQDDPLANLNWSTADFAWLTAELCALAQELCQGRIVSTLEGGY 287
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 110 (43.8 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 46/217 (21%), Positives = 96/217 (44%)
Query: 96 DEITSEPQESVVTRPWPIVY--RPEYNVHFFKLEKLHPFDSKKWKHIFNYLWKH-IFNYL 152
+E P + + P + Y + Y+ +HP D ++ +I+ L + + + +
Sbjct: 110 EESKEAPGLPLASLPSGLCYDVQMRYHCEVRPTSDVHPEDPRRIYYIYKELCRAGLVDDI 169
Query: 153 VEAKFITQDNI--IEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPN--YF 208
+ + + I + +EE++ + HT + ++ + +++ E+ L + YF
Sbjct: 170 ESTRPLVARPLKRIHARNATEEEISLVHTAAHYAFVESTKDMSD-EELIALEHTRDSIYF 228
Query: 209 VQKCYLRPMRYHVGGTLEAGF-LALRRGWSIN--IGGGFHHASETKGGGFCAYADISLLV 265
+ + VGG +E +A R+ + I HHA K GFC + ++S+
Sbjct: 229 NNLTFASSL-LSVGGAIETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAA 287
Query: 266 KLLFQSKSISTA--MIVDLDAHQGNGYEKDFMNETRI 300
++ Q +S MI+D D H GNG +K F ++ +
Sbjct: 288 RVCQQRLGLSCRKIMILDWDVHHGNGIQKAFYDDPNV 324
Score = 55 (24.4 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 343 RSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMKARERRVPIVMLTSGGY 400
+ F PD+++ +G D D LG ++P ++ A+ + + + GGY
Sbjct: 386 QEFDPDLVIIASGFDAAAGDTLGGCFVTPACYAHMTHMLMTLAQGK---VAVCLEGGY 440
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 112 (44.5 bits), Expect = 0.00088, P = 0.00088
Identities = 42/154 (27%), Positives = 67/154 (43%)
Query: 152 LVEAKFI-TQDNIIEPQEVSEEQLLIAHTEKYLKSLKWSFNVAAISEVCPLVAVPNYFVQ 210
L+EA + Q I++P+ S E++ HT+ YL+ L+ + Y
Sbjct: 44 LIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCP 103
Query: 211 KCY-LRPMRYHVGGTLEAGFLALRRGW---SINIGGGFHHASETKGGGFCAYADISLLVK 266
+ VGG L G +IN GG+HHA + + GFC Y + ++L
Sbjct: 104 ATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC-YLNDAVLGI 162
Query: 267 LLFQSKSISTAMIVDLDAHQGNGYEKDFMNETRI 300
L + K + VDLD H G+G E F +++
Sbjct: 163 LRLRRK-FDRILYVDLDLHHGDGVEDAFSFTSKV 195
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 55/250 (22%), Positives = 100/250 (40%)
Query: 170 SEEQLLIAHTEKYLKSLKWSFNVAA--ISEVCPLVAVPNYFVQKCYLRPMRYHVGGTLEA 227
+E+ LL H+ YL+ K + + + P V +Y + + V L
Sbjct: 75 TEDDLLRVHSAAYLQRFKALSDAGGGHLGDEAP-VGPGSYEIAQLSAGLAMAAVDAVLSG 133
Query: 228 GFLALRRGWSINIGGGFHHASETKGGGFCAYADISLLVKLLFQSKSISTAMIVDLDAHQG 287
+S++ G HH + + GFC A+I++ ++ + ++D D H G
Sbjct: 134 ---EADNAYSLSRPPG-HHCTRDQAMGFCFLANIAIAIEAAKARHGLGKVAVIDWDVHHG 189
Query: 288 NGYEKDFMNETRIFIM----ETCIT-------SKAKEA-IRCRIE--LAPYTEDQHYLEK 333
NG + F + + + C + + A + C I L P + YL
Sbjct: 190 NGTQSIFEERADVLTLSLHQDGCFPPGYGGEQDRGRGAGLGCNINIPLLPGSGHDAYLYA 249
Query: 334 IEAGLERSLRSFCPDIIVYNAGTDVLLNDPLGLLAISPQGIIRRDELVFMK-ARER--RV 390
++ + +L F P++I+ G D DPL + + R+ +K A ER R
Sbjct: 250 MQHIVIPALERFEPELIIVACGYDANAVDPLARMLLHSDSF--REMTQCLKDAAERLCRG 307
Query: 391 PIVMLTSGGY 400
+V++ GGY
Sbjct: 308 RLVLVHEGGY 317
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 436 436 0.00088 118 3 11 22 0.49 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 182
No. of states in DFA: 612 (65 KB)
Total size of DFA: 276 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.13u 0.09s 38.22t Elapsed: 00:00:02
Total cpu time: 38.17u 0.09s 38.26t Elapsed: 00:00:03
Start: Thu Aug 15 11:04:26 2013 End: Thu Aug 15 11:04:29 2013
WARNINGS ISSUED: 1