BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8530
(68 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449266313|gb|EMC77377.1| Histone deacetylase 11, partial [Columba livia]
Length = 334
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISR 68
GI++RDE+VF AR RR+PI+M+TSGGY K+TARIIADSILNL LGLI +
Sbjct: 275 GIVKRDEVVFKAARRRRIPILMVTSGGYQKRTARIIADSILNLHSLGLIDK 325
>gi|326927845|ref|XP_003210099.1| PREDICTED: histone deacetylase 11-like [Meleagris gallopavo]
Length = 425
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISR 68
GI++RDE+VF AR R +PI+M+TSGGY K+TARIIADSILNL +LGLI +
Sbjct: 346 GIVKRDEVVFKAARSRGIPILMVTSGGYQKRTARIIADSILNLHNLGLIDK 396
>gi|332231745|ref|XP_003265055.1| PREDICTED: histone deacetylase 11 isoform 1 [Nomascus leucogenys]
Length = 319
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 43/50 (86%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 249 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFDLGLIG 298
>gi|332231747|ref|XP_003265056.1| PREDICTED: histone deacetylase 11 isoform 2 [Nomascus leucogenys]
Length = 343
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 43/49 (87%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 273 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFDLGLI 321
>gi|91080831|ref|XP_970656.1| PREDICTED: similar to Histone deacetylase 11 (HD11) [Tribolium
castaneum]
gi|270005420|gb|EFA01868.1| hypothetical protein TcasGA2_TC007473 [Tribolium castaneum]
Length = 331
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/50 (72%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GII RDELVF +AR R +PIVMLTSGGYLK++A+IIA SI NL D GLI+
Sbjct: 276 GIIERDELVFREARSRNIPIVMLTSGGYLKKSAKIIATSIKNLHDSGLIT 325
>gi|156393770|ref|XP_001636500.1| predicted protein [Nematostella vectensis]
gi|156223604|gb|EDO44437.1| predicted protein [Nematostella vectensis]
Length = 364
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 44/50 (88%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GII+RD++VF +AR R +PI+M+TSGGY ++TARIIADSILNL + GLIS
Sbjct: 294 GIIQRDQIVFQEARSRSIPIMMVTSGGYQRRTARIIADSILNLHEQGLIS 343
>gi|149419640|ref|XP_001518860.1| PREDICTED: histone deacetylase 11-like, partial [Ornithorhynchus
anatinus]
Length = 172
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISR 68
GI++RDE+VF AR RVPI+M+TSGGY K+TARIIADSILNL LGLI +
Sbjct: 93 GIVKRDEIVFRAARTHRVPILMVTSGGYQKRTARIIADSILNLHSLGLIDK 143
>gi|118096828|ref|XP_414321.2| PREDICTED: histone deacetylase 11 [Gallus gallus]
Length = 358
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLISR 68
GI++RDE+VF AR R +PI+M+TSGGY K+TARIIADSILNL +LGLI +
Sbjct: 277 GIVKRDEVVFKAARSRGIPILMVTSGGYQKRTARIIADSILNLHNLGLIDK 327
>gi|432097765|gb|ELK27813.1| Histone deacetylase 11 [Myotis davidii]
Length = 360
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF AR +VPI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 294 GIVKRDELVFRVARRCQVPILMVTSGGYQKRTARIIADSILNLYDLGLI 342
>gi|431899765|gb|ELK07712.1| Histone deacetylase 11 [Pteropus alecto]
Length = 417
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R R+VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 347 GIMKRDELVFRVVRGRQVPILMVTSGGYQKRTARIIADSILNLYGLGLI 395
>gi|395516785|ref|XP_003762566.1| PREDICTED: histone deacetylase 11 [Sarcophilus harrisii]
Length = 331
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 43/49 (87%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF AR+ +PI+M+TSGGY K++ARIIADSILNL +LGLI
Sbjct: 277 GIVKRDELVFQAARKHNIPILMVTSGGYQKESARIIADSILNLFNLGLI 325
>gi|426339523|ref|XP_004033698.1| PREDICTED: histone deacetylase 11 isoform 1 [Gorilla gorilla
gorilla]
Length = 347
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
>gi|10438544|dbj|BAB15272.1| unnamed protein product [Homo sapiens]
Length = 347
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
>gi|397511877|ref|XP_003826289.1| PREDICTED: histone deacetylase 11 isoform 1 [Pan paniscus]
Length = 348
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 278 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 326
>gi|297669993|ref|XP_002813164.1| PREDICTED: histone deacetylase 11 isoform 1 [Pongo abelii]
Length = 347
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
>gi|444717454|gb|ELW58284.1| Histone deacetylase 11 [Tupaia chinensis]
Length = 372
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI+RRDELVF R R+VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 302 GIVRRDELVFRVVRGRQVPILMVTSGGYQKRTARIIADSILNLHSLGLI 350
>gi|11291393|pir||T46431 hypothetical protein DKFZp434C0926.1 - human
gi|6807883|emb|CAB70712.1| hypothetical protein [Homo sapiens]
Length = 147
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 77 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 125
>gi|426339525|ref|XP_004033699.1| PREDICTED: histone deacetylase 11 isoform 2 [Gorilla gorilla
gorilla]
Length = 349
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 279 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLIG 328
>gi|217272877|ref|NP_079103.2| histone deacetylase 11 isoform 1 [Homo sapiens]
gi|26394832|sp|Q96DB2.1|HDA11_HUMAN RecName: Full=Histone deacetylase 11; Short=HD11
gi|16307174|gb|AAH09676.1| Histone deacetylase 11 [Homo sapiens]
gi|117644908|emb|CAL37920.1| hypothetical protein [synthetic construct]
gi|117646466|emb|CAL38700.1| hypothetical protein [synthetic construct]
gi|119584569|gb|EAW64165.1| histone deacetylase 11, isoform CRA_i [Homo sapiens]
gi|119584572|gb|EAW64168.1| histone deacetylase 11, isoform CRA_i [Homo sapiens]
gi|208966472|dbj|BAG73250.1| histone deacetylase 11 [synthetic construct]
gi|410220854|gb|JAA07646.1| histone deacetylase 11 [Pan troglodytes]
gi|410262586|gb|JAA19259.1| histone deacetylase 11 [Pan troglodytes]
gi|410287274|gb|JAA22237.1| histone deacetylase 11 [Pan troglodytes]
gi|410336795|gb|JAA37344.1| histone deacetylase 11 [Pan troglodytes]
Length = 347
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
>gi|403268333|ref|XP_003926231.1| PREDICTED: histone deacetylase 11 [Saimiri boliviensis boliviensis]
Length = 296
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 226 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLIG 275
>gi|297669995|ref|XP_002813165.1| PREDICTED: histone deacetylase 11 isoform 2 [Pongo abelii]
Length = 347
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLIG 326
>gi|397511879|ref|XP_003826290.1| PREDICTED: histone deacetylase 11 isoform 2 [Pan paniscus]
Length = 297
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 227 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLIG 276
>gi|332816489|ref|XP_530587.3| PREDICTED: histone deacetylase 11 [Pan troglodytes]
Length = 308
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 238 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 286
>gi|119584564|gb|EAW64160.1| histone deacetylase 11, isoform CRA_d [Homo sapiens]
Length = 219
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 149 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 197
>gi|194386580|dbj|BAG61100.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 85 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLI 133
>gi|209862883|ref|NP_001129513.1| histone deacetylase 11 isoform 2 [Homo sapiens]
gi|194375634|dbj|BAG56762.1| unnamed protein product [Homo sapiens]
Length = 296
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 226 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLIG 275
>gi|10437935|dbj|BAB15127.1| unnamed protein product [Homo sapiens]
gi|48146799|emb|CAG33622.1| HDAC11 [Homo sapiens]
Length = 225
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R RRVPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 155 GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLIG 204
>gi|426250036|ref|XP_004018746.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 11 [Ovis aries]
Length = 646
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G+++RDELVF R R++PI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 514 GVVKRDELVFRIVRGRQLPILMVTSGGYQKRTARIIADSILNLYGLGLI 562
>gi|354465542|ref|XP_003495238.1| PREDICTED: histone deacetylase 11-like [Cricetulus griseus]
Length = 443
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDE+VF R +PI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 373 GIVKRDEVVFRLVRAHDIPILMVTSGGYQKRTARIIADSILNLHDLGLI 421
>gi|301770641|ref|XP_002920740.1| PREDICTED: histone deacetylase 11-like [Ailuropoda melanoleuca]
Length = 411
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R R+VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 341 GIVKRDELVFRVVRGRQVPILMVTSGGYQKRTARIIADSILNLYSLGLI 389
>gi|281344338|gb|EFB19922.1| hypothetical protein PANDA_009507 [Ailuropoda melanoleuca]
Length = 345
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R R+VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 275 GIVKRDELVFRVVRGRQVPILMVTSGGYQKRTARIIADSILNLYSLGLI 323
>gi|410951796|ref|XP_003982579.1| PREDICTED: histone deacetylase 11 [Felis catus]
Length = 296
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R R+VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 226 GIVKRDELVFRVVRGRQVPILMVTSGGYQKRTARIIADSILNLYSLGLIG 275
>gi|432859825|ref|XP_004069255.1| PREDICTED: histone deacetylase 11-like [Oryzias latipes]
Length = 664
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/49 (67%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDE+VF A++R +PI+M+TSGGY K+TARIIADSILNL GLI
Sbjct: 585 GIVKRDEIVFRAAKQRGIPILMVTSGGYQKRTARIIADSILNLRQQGLI 633
>gi|395847170|ref|XP_003796256.1| PREDICTED: histone deacetylase 11 [Otolemur garnettii]
Length = 347
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R +VPI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 277 GIVKRDELVFQIVRGCQVPILMVTSGGYQKRTARIIADSILNLYDLGLI 325
>gi|334338492|ref|XP_003341796.1| PREDICTED: histone deacetylase 11-like [Monodelphis domestica]
Length = 476
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 40/49 (81%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI+ RDELVF R+ VPI+M+TSGGY KQTAR+IADSILNL +GLI
Sbjct: 424 GIVMRDELVFRTVRKYGVPILMVTSGGYQKQTARVIADSILNLYSMGLI 472
>gi|344241605|gb|EGV97708.1| Histone deacetylase 11 [Cricetulus griseus]
Length = 301
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDE+VF R +PI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 231 GIVKRDEVVFRLVRAHDIPILMVTSGGYQKRTARIIADSILNLHDLGLI 279
>gi|390475353|ref|XP_002758694.2| PREDICTED: histone deacetylase 11 [Callithrix jacchus]
Length = 347
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R R+VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRMVRGRQVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
>gi|388454314|ref|NP_001252584.1| histone deacetylase 11 [Macaca mulatta]
gi|26394837|sp|Q9GKU5.2|HDA11_MACFA RecName: Full=Histone deacetylase 11; Short=HD11
gi|387542188|gb|AFJ71721.1| histone deacetylase 11 isoform 1 [Macaca mulatta]
Length = 347
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R R VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRMVRGRHVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
>gi|402859321|ref|XP_003894111.1| PREDICTED: histone deacetylase 11 isoform 1 [Papio anubis]
Length = 347
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R R VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRMVRGRHVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
>gi|355559429|gb|EHH16157.1| hypothetical protein EGK_11401, partial [Macaca mulatta]
gi|355746507|gb|EHH51121.1| hypothetical protein EGM_10451, partial [Macaca fascicularis]
Length = 347
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R R VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRMVRGRHVPILMVTSGGYQKRTARIIADSILNLFGLGLI 325
>gi|380798593|gb|AFE71172.1| histone deacetylase 11 isoform 1, partial [Macaca mulatta]
Length = 338
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R R VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 268 GIVKRDELVFRMVRGRHVPILMVTSGGYQKRTARIIADSILNLFGLGLI 316
>gi|11611547|dbj|BAB18987.1| hypothetical protein [Macaca fascicularis]
Length = 319
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R R VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 249 GIVKRDELVFRMVRGRHVPILMVTSGGYQKRTARIIADSILNLFGLGLIG 298
>gi|402859323|ref|XP_003894112.1| PREDICTED: histone deacetylase 11 isoform 2 [Papio anubis]
Length = 296
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R R VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 226 GIVKRDELVFRMVRGRHVPILMVTSGGYQKRTARIIADSILNLFGLGLIG 275
>gi|345786364|ref|XP_541747.3| PREDICTED: histone deacetylase 11 [Canis lupus familiaris]
Length = 296
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R R+VPI+M+TSGGY K+TARIIADSILNL +GLI
Sbjct: 226 GIVKRDELVFRVVRGRQVPILMVTSGGYQKRTARIIADSILNLYSVGLIG 275
>gi|170030566|ref|XP_001843159.1| histone deacetylase 11 [Culex quinquefasciatus]
gi|167867835|gb|EDS31218.1| histone deacetylase 11 [Culex quinquefasciatus]
Length = 350
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+I RDE+VF ARER VP+VML SGGYL+ +AR+IADSILNL + GL+
Sbjct: 298 GVIERDEIVFAMARERSVPLVMLLSGGYLRSSARVIADSILNLNEKGLLP 347
>gi|348556215|ref|XP_003463918.1| PREDICTED: histone deacetylase 11-like [Cavia porcellus]
Length = 488
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDE+VF R ++PI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 418 GIVKRDEVVFRLVRAHQIPILMVTSGGYQKRTARIIADSILNLHDLGLI 466
>gi|357614603|gb|EHJ69167.1| putative histone deacetylase 11-like protein [Danaus plexippus]
Length = 242
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 43/51 (84%)
Query: 17 LGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
+GII+RDE VF +E+ +P+VMLTSGGYL++TA+IIADSI+NL + GLI
Sbjct: 185 VGIIKRDEFVFEICKEQDIPVVMLTSGGYLRRTAKIIADSIMNLKNKGLIG 235
>gi|291393305|ref|XP_002713169.1| PREDICTED: histone deacetylase 11-like [Oryctolagus cuniculus]
Length = 296
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R +VPI+M+TSGGY K+TARIIADSILNL +LGLI
Sbjct: 226 GIVKRDELVFRVVRGHQVPILMVTSGGYQKRTARIIADSILNLHNLGLIG 275
>gi|156120759|ref|NP_001095526.1| histone deacetylase 11 [Bos taurus]
gi|154757388|gb|AAI51742.1| HDAC11 protein [Bos taurus]
gi|296474662|tpg|DAA16777.1| TPA: histone deacetylase 11 [Bos taurus]
Length = 386
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G+++RDELVF R R++PI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GVVKRDELVFRIVRGRQLPILMVTSGGYQKRTARIIADSILNLYSLGLI 325
>gi|440903563|gb|ELR54202.1| Histone deacetylase 11, partial [Bos grunniens mutus]
Length = 386
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G+++RDELVF R R++PI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 276 GVVKRDELVFRIVRGRQLPILMVTSGGYQKRTARIIADSILNLYSLGLI 324
>gi|50344998|ref|NP_001002171.1| histone deacetylase 11 [Danio rerio]
gi|49256677|gb|AAH74052.1| Zgc:91942 [Danio rerio]
gi|182892122|gb|AAI65866.1| Zgc:91942 protein [Danio rerio]
Length = 366
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GII+RDE++F AR R +PI+M+TSGGY K+TARIIADSILNL GLI
Sbjct: 288 GIIKRDEIIFRAARRRGIPILMVTSGGYQKKTARIIADSILNLHRQGLI 336
>gi|21450317|ref|NP_659168.1| histone deacetylase 11 [Mus musculus]
gi|26394805|sp|Q91WA3.1|HDA11_MOUSE RecName: Full=Histone deacetylase 11; Short=HD11
gi|16740659|gb|AAH16208.1| Histone deacetylase 11 [Mus musculus]
gi|26337759|dbj|BAC32565.1| unnamed protein product [Mus musculus]
gi|148666877|gb|EDK99293.1| histone deacetylase 11 [Mus musculus]
Length = 347
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDE+VF R +PI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 277 GIVKRDEVVFRVVRAHDIPILMVTSGGYQKRTARIIADSILNLHDLGLIG 326
>gi|417399348|gb|JAA46694.1| Putative histone deacetylase [Desmodus rotundus]
Length = 347
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R +VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRVVRGHQVPILMVTSGGYQKRTARIIADSILNLYGLGLIG 326
>gi|348518091|ref|XP_003446565.1| PREDICTED: histone deacetylase 11-like [Oreochromis niloticus]
Length = 367
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GII+RDELVF A+ R +P++M+TSGGY K+TARIIADSILNL GLI
Sbjct: 288 GIIKRDELVFRAAKRRGIPVLMVTSGGYQKKTARIIADSILNLHRQGLIE 337
>gi|348605146|ref|NP_001100080.2| histone deacetylase 11 [Rattus norvegicus]
gi|149036741|gb|EDL91359.1| histone deacetylase 11 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|183985828|gb|AAI66430.1| Hdac11 protein [Rattus norvegicus]
Length = 347
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDE+VF R +PI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 277 GIVKRDEVVFRVVRAHDIPILMVTSGGYQKRTARIIADSILNLHDLGLIG 326
>gi|149036742|gb|EDL91360.1| histone deacetylase 11 (predicted), isoform CRA_b [Rattus
norvegicus]
gi|149036743|gb|EDL91361.1| histone deacetylase 11 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 155
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDE+VF R +PI+M+TSGGY K+TARIIADSILNL DLGLI
Sbjct: 85 GIVKRDEVVFRVVRAHDIPILMVTSGGYQKRTARIIADSILNLHDLGLI 133
>gi|344275965|ref|XP_003409781.1| PREDICTED: histone deacetylase 11-like [Loxodonta africana]
Length = 296
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R +VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 226 GIVKRDELVFRVVRGHQVPILMVTSGGYQKRTARIIADSILNLHGLGLIG 275
>gi|335299481|ref|XP_003132448.2| PREDICTED: histone deacetylase 11-like [Sus scrofa]
Length = 296
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RDELVF R +VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 226 GIVKRDELVFRMVRSLQVPILMVTSGGYQKRTARIIADSILNLYGLGLIG 275
>gi|149728400|ref|XP_001489672.1| PREDICTED: histone deacetylase 11-like [Equus caballus]
Length = 347
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI++RDELVF R +VPI+M+TSGGY K+TARIIADSILNL LGLI
Sbjct: 277 GIVKRDELVFRIVRGLQVPILMVTSGGYQKRTARIIADSILNLCGLGLI 325
>gi|443694557|gb|ELT95657.1| hypothetical protein CAPTEDRAFT_197333 [Capitella teleta]
Length = 377
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 38/49 (77%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GII RD++VF K R R +PIVM+TSGGY TARIIADSILNL L LI
Sbjct: 320 GIIERDQIVFQKVRTRGIPIVMVTSGGYQPTTARIIADSILNLRALSLI 368
>gi|327266298|ref|XP_003217943.1| PREDICTED: histone deacetylase 11-like [Anolis carolinensis]
Length = 286
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 42/49 (85%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GII RDE+VF A + ++PI+M+TSGGY+K+TARIIADSILNL +GLI
Sbjct: 226 GIIERDEIVFRAAWKHQIPILMVTSGGYMKRTARIIADSILNLYHVGLI 274
>gi|291230574|ref|XP_002735241.1| PREDICTED: histone deacetylase 11-like [Saccoglossus kowalevskii]
Length = 376
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GII RD++VF AR R++PI+M+TSGGY K+TARIIADSILNL LI
Sbjct: 297 GIIERDQIVFEAARSRKIPILMVTSGGYQKRTARIIADSILNLKTHELI 345
>gi|30690100|ref|NP_851078.1| histone deacetylase 2 [Arabidopsis thaliana]
gi|332006133|gb|AED93516.1| histone deacetylase 2 [Arabidopsis thaliana]
Length = 359
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI RDE VF ARE+ +P+VMLTSGGY+K +AR+IADSI NL+ GLI
Sbjct: 306 GITSRDEKVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLI 354
>gi|297812823|ref|XP_002874295.1| hypothetical protein ARALYDRAFT_489451 [Arabidopsis lyrata subsp.
lyrata]
gi|297320132|gb|EFH50554.1| hypothetical protein ARALYDRAFT_489451 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI RDE VF ARE+ +P+VMLTSGGY+K +AR+IADSI NL+ GLI
Sbjct: 334 GITSRDEKVFRFAREKSIPLVMLTSGGYMKSSARVIADSIENLSRQGLI 382
>gi|30690103|ref|NP_568480.2| histone deacetylase 2 [Arabidopsis thaliana]
gi|145558941|sp|Q944K3.2|HDA2_ARATH RecName: Full=Histone deacetylase 2
gi|332006134|gb|AED93517.1| histone deacetylase 2 [Arabidopsis thaliana]
Length = 387
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI RDE VF ARE+ +P+VMLTSGGY+K +AR+IADSI NL+ GLI
Sbjct: 334 GITSRDEKVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLI 382
>gi|5107816|gb|AAD40129.1|AF149413_10 contains similarity to histone deacetylases; Pfam PF00850,
Score=13.3, E=5e-10, N=1 [Arabidopsis thaliana]
Length = 316
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI RDE VF ARE+ +P+VMLTSGGY+K +AR+IADSI NL+ GLI
Sbjct: 263 GITSRDEKVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLI 311
>gi|388493714|gb|AFK34923.1| unknown [Lotus japonicus]
Length = 348
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI RDE VF ARE+ +PIVMLTSGGY+K +AR+IADSI+NL+ LI
Sbjct: 292 GIALRDEKVFRFAREKNIPIVMLTSGGYMKSSARVIADSIVNLSKKCLI 340
>gi|21105771|gb|AAM34784.1|AF510671_1 HDA2 [Arabidopsis thaliana]
Length = 340
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI RDE VF ARE+ +P+VMLTSGGY+K +AR+IADSI NL+ GLI
Sbjct: 287 GITSRDEKVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLI 335
>gi|198414517|ref|XP_002121327.1| PREDICTED: similar to histone deacetylase 11, partial [Ciona
intestinalis]
Length = 418
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GDQ+ L GI++RDE+VF A+ R +PIVMLTSGGY + TARIIA+SIL+L + GL
Sbjct: 356 GDQLGRLNISAEGIVKRDEIVFALAKGRGIPIVMLTSGGYQRTTARIIANSILSLRNNGL 415
Query: 66 I 66
I
Sbjct: 416 I 416
>gi|405959181|gb|EKC25242.1| Histone deacetylase 11 [Crassostrea gigas]
Length = 358
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GII RD LVF R R +PI+M+TSGGY + TARIIADS+LNL GLI
Sbjct: 297 GIIERDRLVFSHVRSRNIPIMMVTSGGYQRSTARIIADSVLNLKKQGLIP 346
>gi|413954352|gb|AFW87001.1| histone deacetylase 11 [Zea mays]
Length = 351
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RDE VF A++R +P++MLTSGGY+K +AR+IADSI+NL++ LI
Sbjct: 296 GVVTRDEKVFRFAKDRNIPLLMLTSGGYMKSSARVIADSIINLSNKNLI 344
>gi|168036173|ref|XP_001770582.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162678103|gb|EDQ64565.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 357
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+ +RDE+VF A+++ PI+MLTSGGY+K +AR+IADSI NL GLIS
Sbjct: 293 GVKQRDEIVFQFAKDQHAPILMLTSGGYMKTSARVIADSITNLGAKGLIS 342
>gi|357437493|ref|XP_003589022.1| Histone deacetylase [Medicago truncatula]
gi|355478070|gb|AES59273.1| Histone deacetylase [Medicago truncatula]
Length = 350
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI RDE VF AR++ +PIVMLTSGGY+K +AR+IADSILNL LI
Sbjct: 293 GIALRDEKVFRFARKKNIPIVMLTSGGYMKSSARVIADSILNLEKKCLI 341
>gi|196005073|ref|XP_002112403.1| hypothetical protein TRIADDRAFT_25844 [Trichoplax adhaerens]
gi|190584444|gb|EDV24513.1| hypothetical protein TRIADDRAFT_25844, partial [Trichoplax
adhaerens]
Length = 374
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G+I+RDE+VF + R R +PIVMLTSGGY K A+IIADSI+NL LI
Sbjct: 273 GVIKRDEIVFKETRFRNIPIVMLTSGGYQKSNAKIIADSIMNLYQKKLI 321
>gi|449447110|ref|XP_004141312.1| PREDICTED: histone deacetylase 2-like [Cucumis sativus]
gi|449486647|ref|XP_004157356.1| PREDICTED: histone deacetylase 2-like [Cucumis sativus]
Length = 351
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + +L+ GI +RDE VF AR R +PIVMLTSGGY+K +A++IADSI NL+ L
Sbjct: 282 GDPLGLLKISAEGIAKRDEKVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRL 341
Query: 66 I 66
I
Sbjct: 342 I 342
>gi|226500478|ref|NP_001144492.1| uncharacterized protein LOC100277470 precursor [Zea mays]
gi|195642812|gb|ACG40874.1| hypothetical protein [Zea mays]
Length = 116
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RDE VF A++R +P++MLTSGGY+K +AR+IADSI+NL++ LI
Sbjct: 61 GVVTRDEKVFRFAKDRNIPLLMLTSGGYMKSSARVIADSIINLSNKNLI 109
>gi|242096222|ref|XP_002438601.1| hypothetical protein SORBIDRAFT_10g022550 [Sorghum bicolor]
gi|241916824|gb|EER89968.1| hypothetical protein SORBIDRAFT_10g022550 [Sorghum bicolor]
Length = 350
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RDE VF A+++ +P++MLTSGGY+K +AR+IADSI+NL++ LI
Sbjct: 295 GVVTRDEKVFTFAKDQNIPLLMLTSGGYMKSSARVIADSIINLSNKNLI 343
>gi|195622418|gb|ACG33039.1| histone deacetylase 11 [Zea mays]
Length = 352
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RD+ VF A++R +P++MLTSGGY+K +AR+IADSI+NL++ LI
Sbjct: 297 GVVTRDDKVFRFAKDRNIPLLMLTSGGYMKSSARVIADSIINLSNKNLI 345
>gi|217072904|gb|ACJ84812.1| unknown [Medicago truncatula]
Length = 201
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
GI RDE VF AR++ +PIVMLTSGGY+K +AR+IADSILNL LI
Sbjct: 144 GIALRDEKVFRFARKKNIPIVMLTSGGYMKSSARVIADSILNLEKKCLI 192
>gi|242060988|ref|XP_002451783.1| hypothetical protein SORBIDRAFT_04g007780 [Sorghum bicolor]
gi|241931614|gb|EES04759.1| hypothetical protein SORBIDRAFT_04g007780 [Sorghum bicolor]
Length = 365
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G+I RDE VF A+++ +P++MLTSGGY+K +AR+IADSI+NL++ LI
Sbjct: 307 GVITRDEKVFRFAKDQSIPLLMLTSGGYMKSSARVIADSIINLSNKNLI 355
>gi|157106851|ref|XP_001649512.1| histone deacetylase [Aedes aegypti]
gi|108879745|gb|EAT43970.1| AAEL004639-PA [Aedes aegypti]
Length = 358
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNL 60
G+I RDE+VF AR+R VP+VML SGGYL+ +AR+IADSILNL
Sbjct: 306 GVIERDEIVFEMARDRGVPLVMLLSGGYLRSSARVIADSILNL 348
>gi|168019285|ref|XP_001762175.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162686579|gb|EDQ72967.1| class III RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 322
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 41/50 (82%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+ +RDE+VF A++++ PI+MLTSGGY+K +AR+IADSI NLA LIS
Sbjct: 263 GVKQRDEMVFRFAKDQKSPIIMLTSGGYMKTSARVIADSIKNLAAKRLIS 312
>gi|356564065|ref|XP_003550277.1| PREDICTED: histone deacetylase 2-like [Glycine max]
Length = 348
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + LE GI RDE VF ARE+ +PIVMLTSGGY+K +A +IADSI+NL+ L
Sbjct: 279 GDPLGRLEISPEGITLRDEKVFRFAREKNIPIVMLTSGGYMKSSAGVIADSIVNLSKKCL 338
Query: 66 I 66
I
Sbjct: 339 I 339
>gi|225429480|ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vinifera]
gi|296081627|emb|CBI20632.3| unnamed protein product [Vitis vinifera]
Length = 359
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 40/49 (81%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G+ RDE VF ARE+++P++MLTSGGY+K +A++IADSI+NL+ LI
Sbjct: 302 GVTSRDEKVFRFAREKKIPLIMLTSGGYMKSSAKVIADSIVNLSRKCLI 350
>gi|222635776|gb|EEE65908.1| hypothetical protein OsJ_21754 [Oryza sativa Japonica Group]
Length = 421
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RDE VF A+++ +P++MLTSGGY+K +AR+IADSI+NL++ LI
Sbjct: 366 GVVIRDEKVFRFAKDQSIPLLMLTSGGYMKSSARVIADSIINLSNKNLI 414
>gi|260804797|ref|XP_002597274.1| hypothetical protein BRAFLDRAFT_203636 [Branchiostoma floridae]
gi|229282537|gb|EEN53286.1| hypothetical protein BRAFLDRAFT_203636 [Branchiostoma floridae]
Length = 339
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
Query: 18 GIIRRDELVFM----KARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GI++RD+LVF K R R++PI+M+TSGGY K+TA+IIADSI NL GLIS
Sbjct: 276 GIVQRDQLVFELARGKGRPRQIPILMVTSGGYQKRTAQIIADSIKNLIAKGLIS 329
>gi|347966468|ref|XP_321350.5| AGAP001736-PA [Anopheles gambiae str. PEST]
gi|333470046|gb|EAA00854.5| AGAP001736-PA [Anopheles gambiae str. PEST]
Length = 361
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + +L+ G++ RDE VF A ER +P+VML SGGYL+ +AR+IA+SI+NL D L
Sbjct: 297 GDPLGLLDITPEGVVERDEFVFRSALERSIPLVMLLSGGYLRSSARVIANSIVNLRDKAL 356
Query: 66 IS 67
+
Sbjct: 357 LP 358
>gi|115468630|ref|NP_001057914.1| Os06g0571100 [Oryza sativa Japonica Group]
gi|54291235|dbj|BAD61930.1| putative HDA2 [Oryza sativa Japonica Group]
gi|113595954|dbj|BAF19828.1| Os06g0571100 [Oryza sativa Japonica Group]
gi|125555796|gb|EAZ01402.1| hypothetical protein OsI_23434 [Oryza sativa Indica Group]
gi|215704748|dbj|BAG94776.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 352
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RDE VF A+++ +P++MLTSGGY+K +AR+IADSI+NL++ LI
Sbjct: 297 GVVIRDEKVFRFAKDQSIPLLMLTSGGYMKSSARVIADSIINLSNKNLI 345
>gi|393906996|gb|EJD74475.1| hypothetical protein LOAG_18214 [Loa loa]
Length = 396
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + +L GI +RDE+VF AR+R +P+VML SGGY+ T +IA SILNL D L
Sbjct: 332 GDPLGLLSISSKGIRKRDEIVFKMARDRHIPVVMLLSGGYMPHTHEVIAKSILNLYDKNL 391
Query: 66 IS 67
++
Sbjct: 392 LN 393
>gi|340381672|ref|XP_003389345.1| PREDICTED: histone deacetylase 11-like, partial [Amphimedon
queenslandica]
Length = 252
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 6 MGDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNL 60
MGD + +L+ G+I RDELVF R R +PI M+TSGGY + A++IADSILNL
Sbjct: 180 MGDPLGILDITDQGVILRDELVFQTVRNRNIPIFMVTSGGYQRNNAQVIADSILNL 235
>gi|326522206|dbj|BAK04231.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RDE VF A+++ +P+VM+TSGGY+K +AR+IADSI NL+ LI
Sbjct: 297 GVVIRDEKVFKFAKDQNIPLVMMTSGGYMKSSARVIADSITNLSQKDLI 345
>gi|170579015|ref|XP_001894638.1| histone deacetylase 11 [Brugia malayi]
gi|158598650|gb|EDP36504.1| histone deacetylase 11, putative [Brugia malayi]
Length = 380
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + +L GI +RDE+VF AR+R +P+VML SGGY+ T +IA SILNL D L
Sbjct: 316 GDPLGLLSISSKGIRKRDEIVFKMARDRHIPVVMLLSGGYMPNTHEVIAKSILNLYDKNL 375
Query: 66 I 66
+
Sbjct: 376 L 376
>gi|312091972|ref|XP_003147172.1| histone deacetylase 11 [Loa loa]
Length = 317
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + +L GI +RDE+VF AR+R +P+VML SGGY+ T +IA SILNL D L
Sbjct: 253 GDPLGLLSISSKGIRKRDEIVFKMARDRHIPVVMLLSGGYMPHTHEVIAKSILNLYDKNL 312
Query: 66 IS 67
++
Sbjct: 313 LN 314
>gi|254212167|gb|ACT65744.1| histone deacetylase family RPD3/HDA1 class III [Hordeum vulgare]
Length = 225
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RDE VF A+++ +P+VM+TSGGY+K +AR+IADSI NL+ LI
Sbjct: 170 GVVIRDEKVFKFAKDQNIPLVMMTSGGYMKSSARVIADSITNLSQKDLI 218
>gi|289742065|gb|ADD19780.1| putative histone deacetylase [Glossina morsitans morsitans]
Length = 359
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+I RD VF R +++PIVML SGGYLK +A++IA+SI+NL L++
Sbjct: 308 GVIERDRFVFSTCRSQKIPIVMLLSGGYLKSSAKVIAESIINLKHQDLLT 357
>gi|312379378|gb|EFR25672.1| hypothetical protein AND_08794 [Anopheles darlingi]
Length = 354
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + +L+ G++ RDE+VF A +R +P+ ML SGGYL+ +AR+IA+SILNL D L
Sbjct: 290 GDPLGLLDITPEGVMERDEIVFRAALQRTIPLAMLMSGGYLRSSARVIANSILNLRDKAL 349
Query: 66 IS 67
+
Sbjct: 350 LP 351
>gi|302826278|ref|XP_002994646.1| hypothetical protein SELMODRAFT_432551 [Selaginella
moellendorffii]
gi|300137242|gb|EFJ04287.1| hypothetical protein SELMODRAFT_432551 [Selaginella
moellendorffii]
Length = 314
Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + LE G+ RDE+VF AR+R +PIVMLTSGGY++ +A +IA+SI NL L
Sbjct: 37 GDPLGRLEVSPEGVKERDEIVFSFARQRNIPIVMLTSGGYMRSSAGVIAESISNLHSKKL 96
Query: 66 I 66
I
Sbjct: 97 I 97
>gi|357124055|ref|XP_003563722.1| PREDICTED: histone deacetylase 2-like [Brachypodium distachyon]
Length = 352
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + LE G++ RDE VF A ++ +P++MLTSGGY+K +AR+IADSI+NL+ L
Sbjct: 285 GDPLGRLEISPEGVVNRDEKVFRFAVDQNIPLLMLTSGGYMKSSARVIADSIINLSQKEL 344
Query: 66 I 66
I
Sbjct: 345 I 345
>gi|302804117|ref|XP_002983811.1| hypothetical protein SELMODRAFT_180494 [Selaginella moellendorffii]
gi|300148648|gb|EFJ15307.1| hypothetical protein SELMODRAFT_180494 [Selaginella moellendorffii]
Length = 350
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + LE G+ RDE+VF AR+R +PIVMLTSGGY++ +A +IA+SI NL L
Sbjct: 284 GDPLGRLEVSPEGVKERDEIVFSFARQRNIPIVMLTSGGYMRSSAGVIAESISNLHSKKL 343
Query: 66 I 66
I
Sbjct: 344 I 344
>gi|302814820|ref|XP_002989093.1| hypothetical protein SELMODRAFT_129097 [Selaginella moellendorffii]
gi|300143194|gb|EFJ09887.1| hypothetical protein SELMODRAFT_129097 [Selaginella moellendorffii]
Length = 316
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + LE G+ RDE+VF AR+R +PIVMLTSGGY++ +A +IA+SI NL L
Sbjct: 250 GDPLGRLEVSPEGVKERDEIVFSFARQRNIPIVMLTSGGYMRSSAGVIAESISNLHSKKL 309
Query: 66 I 66
I
Sbjct: 310 I 310
>gi|194742864|ref|XP_001953920.1| GF18009 [Drosophila ananassae]
gi|190626957|gb|EDV42481.1| GF18009 [Drosophila ananassae]
Length = 341
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RD LVF R R+P+VML SGGYLK++A +IADSI NL GL+
Sbjct: 292 GVVERDRLVFSTFRTLRIPVVMLLSGGYLKESAGVIADSIANLRQQGLL 340
>gi|402585803|gb|EJW79742.1| HDAC11 protein [Wuchereria bancrofti]
Length = 339
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
GD + +L GI +RDE+VF AR+R +P+VML SGGY+ T +IA SILNL + L
Sbjct: 275 GDPLGLLSISSKGIRKRDEIVFKMARDRHIPVVMLLSGGYMPNTHEVIAKSILNLYNKNL 334
Query: 66 I 66
+
Sbjct: 335 L 335
>gi|195446307|ref|XP_002070720.1| GK10873 [Drosophila willistoni]
gi|194166805|gb|EDW81706.1| GK10873 [Drosophila willistoni]
Length = 342
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G++ RD LVF R +PI+ML SGGY+K++A +IADSI+NL GL++
Sbjct: 293 GVMERDRLVFSTFRALNIPIIMLLSGGYVKKSACVIADSIVNLRRKGLLN 342
>gi|390337555|ref|XP_783282.2| PREDICTED: histone deacetylase 11-like [Strongylocentrotus
purpuratus]
Length = 491
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 18 GIIRRDELVFMKARERR--VPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GII+RD +VF AR+R +PIVM+TSGGY + A IIA SILNL GLI+
Sbjct: 384 GIIKRDMMVFEFARDRPKPIPIVMVTSGGYQRNNADIIAASILNLWRRGLIA 435
>gi|268558276|ref|XP_002637128.1| Hypothetical protein CBG09630 [Caenorhabditis briggsae]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 19 IIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
II RDE+VF ARE+ +PI MLTSGGY K A +IA SI NL LI+
Sbjct: 274 IISRDEVVFKLAREKGIPICMLTSGGYQKNNAHLIAKSIENLHSKNLIN 322
>gi|195039143|ref|XP_001990869.1| GH18019 [Drosophila grimshawi]
gi|193895065|gb|EDV93931.1| GH18019 [Drosophila grimshawi]
Length = 325
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLG 64
G+I RD LVF R +P+VML SGGY+K + R+IADSI+NL G
Sbjct: 274 GVIERDRLVFSTFRSLNIPVVMLLSGGYMKCSKRVIADSIVNLQRQG 320
>gi|195107762|ref|XP_001998477.1| GI23615 [Drosophila mojavensis]
gi|193915071|gb|EDW13938.1| GI23615 [Drosophila mojavensis]
Length = 323
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLG 64
G+I RD LVF R +PIVML SGGY+K + +IADSI+NL G
Sbjct: 274 GVIERDRLVFSTFRALNIPIVMLLSGGYMKSSKNVIADSIVNLKRQG 320
>gi|341892614|gb|EGT48549.1| CBN-HDAC-11 protein [Caenorhabditis brenneri]
gi|341899537|gb|EGT55472.1| hypothetical protein CAEBREN_32506 [Caenorhabditis brenneri]
Length = 284
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 32/48 (66%)
Query: 19 IIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
II RDE+VF AR + +PI MLTSGGY K A IIA SI NL LI
Sbjct: 232 IIARDEIVFKMARSKGIPICMLTSGGYQKNNALIIAQSIENLHSKKLI 279
>gi|195158946|ref|XP_002020344.1| GL13561 [Drosophila persimilis]
gi|198449329|ref|XP_001357545.2| GA16023 [Drosophila pseudoobscura pseudoobscura]
gi|194117113|gb|EDW39156.1| GL13561 [Drosophila persimilis]
gi|198130558|gb|EAL26679.2| GA16023 [Drosophila pseudoobscura pseudoobscura]
Length = 331
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
G++ RD LVF R +P+VML SGGY K +A +IADSI+NL GL+
Sbjct: 282 GVLERDRLVFSTFRALGIPVVMLLSGGYTKASAHVIADSIVNLRQHGLL 330
>gi|66772255|gb|AAY55439.1| IP11069p [Drosophila melanogaster]
Length = 332
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+I RD LVF R +P+VML SGGYLK +A +I DSI+NL GL++
Sbjct: 283 GVIERDRLVFSTFRALGIPVVMLLSGGYLKASAGVITDSIVNLRLQGLLN 332
>gi|66772327|gb|AAY55475.1| IP10969p [Drosophila melanogaster]
Length = 328
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+I RD LVF R +P+VML SGGYLK +A +I DSI+NL GL++
Sbjct: 279 GVIERDRLVFSTFRALGIPVVMLLSGGYLKASAGVITDSIVNLRLQGLLN 328
>gi|195388622|ref|XP_002052978.1| GJ23587 [Drosophila virilis]
gi|194151064|gb|EDW66498.1| GJ23587 [Drosophila virilis]
Length = 326
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+I RD LVF R +PIVML SGGY+ + +IADSI+NL G +S
Sbjct: 274 GVIERDRLVFSTFRALGIPIVMLLSGGYMNSSKHVIADSIVNLQRKGWLS 323
>gi|24649807|ref|NP_733048.1| histone deacetylase X, isoform A [Drosophila melanogaster]
gi|386766464|ref|NP_001247296.1| histone deacetylase X, isoform B [Drosophila melanogaster]
gi|7301219|gb|AAF56350.1| histone deacetylase X, isoform A [Drosophila melanogaster]
gi|227116367|gb|ACP19285.1| IP11169p [Drosophila melanogaster]
gi|383292938|gb|AFH06613.1| histone deacetylase X, isoform B [Drosophila melanogaster]
Length = 343
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+I RD LVF R +P+VML SGGYLK +A +I DSI+NL GL++
Sbjct: 294 GVIERDRLVFSTFRALGIPVVMLLSGGYLKASAGVITDSIVNLRLQGLLN 343
>gi|194909322|ref|XP_001981923.1| GG12313 [Drosophila erecta]
gi|190656561|gb|EDV53793.1| GG12313 [Drosophila erecta]
Length = 332
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G++ RD LVF R +P+VML SGGYLK +A +IADSI+NL GL++
Sbjct: 283 GVMERDRLVFSTFRTLGIPVVMLLSGGYLKASAGVIADSIVNLRLQGLLN 332
>gi|195573625|ref|XP_002104792.1| GD18261 [Drosophila simulans]
gi|194200719|gb|EDX14295.1| GD18261 [Drosophila simulans]
Length = 343
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+I RD LVF R +P+VML SGGYLK +A +I DSI+NL GL++
Sbjct: 294 GVIERDRLVFSTFRALGIPVVMLLSGGYLKASAGVITDSIVNLRLQGLLN 343
>gi|324513441|gb|ADY45523.1| Histone deacetylase 11 [Ascaris suum]
Length = 365
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
GII+RDE+VF A++ +PIVML SGGY+ +I SILNL LIS
Sbjct: 310 GIIKRDEVVFELAQQCHIPIVMLMSGGYMPNNYDVITRSILNLHQKKLIS 359
>gi|195331776|ref|XP_002032575.1| GM23455 [Drosophila sechellia]
gi|194121518|gb|EDW43561.1| GM23455 [Drosophila sechellia]
Length = 343
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G+I RD LVF R +P+VML SGGYLK +A +I DSI+NL GL+
Sbjct: 294 GVIERDRLVFSTFRALGIPVVMLLSGGYLKASAGVITDSIVNLRLQGLLK 343
>gi|193207430|ref|NP_505699.3| Protein HDA-11 [Caenorhabditis elegans]
gi|157888565|emb|CAA94910.3| Protein HDA-11 [Caenorhabditis elegans]
Length = 334
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 19 IIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
II RDE+VF A+ + +PI M+TSGGY K A +IA SI NL LIS
Sbjct: 284 IIARDEVVFNLAKSKGIPICMVTSGGYQKDNALLIAKSIENLQSKNLIS 332
>gi|308478506|ref|XP_003101464.1| CRE-HDAC-11 protein [Caenorhabditis remanei]
gi|308263110|gb|EFP07063.1| CRE-HDAC-11 protein [Caenorhabditis remanei]
Length = 336
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 19 IIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLI 66
II RDE+VF A+ + +PI MLTSGGY K A +IA SI NL LI
Sbjct: 284 IIARDEVVFKLAKSKGIPICMLTSGGYQKDNALLIAKSIENLNSKNLI 331
>gi|449473359|ref|XP_002192262.2| PREDICTED: histone deacetylase 11 [Taeniopygia guttata]
Length = 371
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 3/48 (6%)
Query: 13 LEDHLGIIRRDELVF---MKARERRVPIVMLTSGGYLKQTARIIADSI 57
+ +GI++RDE+VF R VP++M+TSGGY K+TARIIADSI
Sbjct: 284 ISPQVGIVKRDEVVFRWFQGHRSPGVPVLMVTSGGYQKRTARIIADSI 331
>gi|195504646|ref|XP_002099168.1| GE10768 [Drosophila yakuba]
gi|194185269|gb|EDW98880.1| GE10768 [Drosophila yakuba]
Length = 343
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGLIS 67
G++ RD LVF R +P+VML SGGYLK +A +IA SI+NL GL++
Sbjct: 294 GVMERDRLVFSTFRTLGIPVVMLLSGGYLKASAGVIAASIVNLRLQGLLN 343
>gi|320164043|gb|EFW40942.1| histone deacetylase 11 [Capsaspora owczarzaki ATCC 30864]
Length = 372
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 10 VDMLEDHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLAD-LGLISR 68
+M GI+ RDE VF +A R +PIVM+ SGGY +R+IA SI N+ + L+SR
Sbjct: 307 AEMAVSEQGILDRDEAVFRRALSRNIPIVMVLSGGYQSSNSRVIARSIENMVEKFDLLSR 366
>gi|403332831|gb|EJY65466.1| Histone deacetylase 11 [Oxytricha trifallax]
Length = 381
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 18 GIIRRDELVFMKARER-RVPIVMLTSGGYLKQTARIIADSILNL 60
GII+RDEL+F A E+ RVPIVM+ SGGY A +IADSI N
Sbjct: 328 GIIQRDELMFEMAIEQFRVPIVMVLSGGYQMSNAPVIADSIENF 371
>gi|145509340|ref|XP_001440611.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407834|emb|CAK73214.1| unnamed protein product [Paramecium tetraurelia]
Length = 366
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNL 60
G+ RRDE+VF A +++PI+ML SGGY K+ I +SIL L
Sbjct: 322 GLQRRDEVVFKWANHKKIPILMLLSGGYQKENTYAIGESILQL 364
>gi|118357387|ref|XP_001011943.1| Histone deacetylase family protein [Tetrahymena thermophila]
gi|89293710|gb|EAR91698.1| Histone deacetylase family protein [Tetrahymena thermophila SB210]
Length = 458
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 19 IIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNL 60
II+RD++VF + R +P+ M+ SGGY + A +IADSILNL
Sbjct: 400 IIQRDQVVFEECLNRDIPLTMVLSGGYQQINAPVIADSILNL 441
>gi|145497186|ref|XP_001434582.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401709|emb|CAK67185.1| unnamed protein product [Paramecium tetraurelia]
Length = 366
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNL 60
GI RRDE+VF A+ +++P +ML SGGY K+ I +SIL L
Sbjct: 322 GIKRRDEVVFKWAQHKKIPFLMLLSGGYQKENTFAIGESILQL 364
>gi|218780702|ref|YP_002432020.1| histone deacetylase superfamily protein [Desulfatibacillum
alkenivorans AK-01]
gi|218762086|gb|ACL04552.1| Putative sirtuin-type regulators for CoA ligase (histone
deacetylase superfamily) [Desulfatibacillum alkenivorans
AK-01]
Length = 355
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLAD 62
GII RDE VF A + VP+ M+ SGGY K++A IIA S+ NL +
Sbjct: 292 GIIDRDEQVFRTAGKLNVPVAMVLSGGYTKESAGIIAQSMENLLE 336
>gi|307106657|gb|EFN54902.1| hypothetical protein CHLNCDRAFT_23994, partial [Chlorella
variabilis]
Length = 326
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNL 60
G++RRD++V+ A E VPIV + SGGY +++ IA SI NL
Sbjct: 270 GVVRRDQMVWQAALEHSVPIVQVLSGGYTRRSTPCIASSIQNL 312
>gi|159478703|ref|XP_001697440.1| histone deacetylase [Chlamydomonas reinhardtii]
gi|158274319|gb|EDP00102.1| histone deacetylase [Chlamydomonas reinhardtii]
Length = 311
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 16 HLGIIRRDELVFMKARE-RRVPIVMLTSGGYLKQTARIIADSILNL 60
H G++ RDELV+ R+ R PI ML SGGY K +A +I S+ NL
Sbjct: 258 HAGVVERDELVWRWCRDVARAPIAMLLSGGYAKDSAAVITASLTNL 303
>gi|149174347|ref|ZP_01852974.1| deacetylase [Planctomyces maris DSM 8797]
gi|148846892|gb|EDL61228.1| deacetylase [Planctomyces maris DSM 8797]
Length = 319
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 7 GDQVDMLEDHLGIIR-RDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNL 60
GD + L +IR RD V + R+R++P +ML SGGY KQ+ +++ADS+ L
Sbjct: 259 GDPLGGLNISAPMIRERDLYVVSELRKRQIPTIMLLSGGYTKQSFQLVADSVTAL 313
>gi|384248980|gb|EIE22463.1| hypothetical protein COCSUDRAFT_16559 [Coccomyxa subellipsoidea
C-169]
Length = 370
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 19 IIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILN-LADLGLI 66
+ +RDE+VF A + VPI M SGGY K +A +I++ I + + GLI
Sbjct: 308 VAKRDEMVFQAAYDAGVPICMALSGGYAKDSAGVISECIKHIIQKFGLI 356
>gi|302837171|ref|XP_002950145.1| hypothetical protein VOLCADRAFT_59975 [Volvox carteri f.
nagariensis]
gi|300264618|gb|EFJ48813.1| hypothetical protein VOLCADRAFT_59975 [Volvox carteri f.
nagariensis]
Length = 428
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 18 GIIRRDELVFMKARER-RVPIVMLTSGGYLKQTARIIADSILNL 60
G+++RDE+V+ R+ R P+VM SGGY +++A +I SI NL
Sbjct: 311 GVVQRDEVVWRWCRDMARAPVVMALSGGYTRESAGVITASIRNL 354
>gi|443475316|ref|ZP_21065269.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
gi|443019838|gb|ELS33872.1| Histone deacetylase [Pseudanabaena biceps PCC 7429]
Length = 326
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSI 57
G++ RD VF + +P+VM+ SGGY ++ R+IA SI
Sbjct: 278 GVLERDRFVFQTVIDLGIPLVMVLSGGYASESYRLIAHSI 317
>gi|257094856|ref|YP_003168497.1| histone deacetylase superfamily [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047380|gb|ACV36568.1| histone deacetylase superfamily [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 306
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSI 57
G+ RDE+VF R+RRVP+ + +GGY A +I D++
Sbjct: 252 GLAARDEMVFAACRDRRVPVAVAMAGGY----AHVIDDTV 287
>gi|162457481|ref|YP_001619848.1| histone deacetylase [Sorangium cellulosum So ce56]
gi|161168063|emb|CAN99368.1| histone deacetylase family protein [Sorangium cellulosum So ce56]
Length = 327
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 10 VDMLEDHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARII 53
+D+ D L RDE+VF A ERR+PI + +GGY +R++
Sbjct: 260 LDLTHDDLRA--RDEIVFRTALERRIPIAWVLAGGYTPDVSRVV 301
>gi|83647787|ref|YP_436222.1| deacetylase [Hahella chejuensis KCTC 2396]
gi|83635830|gb|ABC31797.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Hahella chejuensis KCTC 2396]
Length = 318
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 7 GDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNLADL 63
GD++ L D+ G+ RD V + +P V++TSGGY K + R+IAD +L ++
Sbjct: 259 GDKLGGLSVDYNGVKARDHFVLDMLIKHNIPTVIMTSGGYSKDSYRLIADLAQHLLEM 316
>gi|301298973|gb|ADK66830.1| putative histone deacetylase superfamily protein [Amphidinium
carterae]
Length = 337
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIA 54
G+ RR+ELV+ A E VP+V+ GGY K AR +A
Sbjct: 291 GLQRRNELVYNLALEYDVPVVVTMGGGYHKDIARTVA 327
>gi|386856400|ref|YP_006260577.1| Histone deacetylase superfamily [Deinococcus gobiensis I-0]
gi|379999929|gb|AFD25119.1| Histone deacetylase superfamily [Deinococcus gobiensis I-0]
Length = 273
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 7 GDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARII 53
GDQ+ L L G+ RDE VF A R+P+VM+T+GGY ++ +++
Sbjct: 210 GDQLGRLALSLDGVRARDERVFRWAARARLPLVMVTAGGYHREPEQLV 257
>gi|168699615|ref|ZP_02731892.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Gemmata obscuriglobus UQM 2246]
Length = 324
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 19 IIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSILNL 60
++ RD V + R R VP VML SGGY +++ R++A++ + L
Sbjct: 272 VLARDLYVIEQLRGRVVPTVMLLSGGYSRESYRLVANTAVEL 313
>gi|373456320|ref|ZP_09548087.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
gi|371717984|gb|EHO39755.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
Length = 311
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 11 DMLEDHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSI 57
DM GI+ R+ V+ R+RR+P+++L GGY K + + D I
Sbjct: 257 DMKLTRQGILERNLFVYRLVRDRRIPLIVLAGGGYGKDSWEVYYDFI 303
>gi|392540847|ref|ZP_10287984.1| histone deacetylase [Pseudoalteromonas piscicida JCM 20779]
Length = 301
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 2 VHTWMGDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARI 52
V W GD + L+ LGI +RD LV ++ VP+ + GGY K R+
Sbjct: 236 VDVWQGDNLGKLDISWLGIAKRDALVLTLCQKHGVPVATVIGGGYDKDHQRL 287
>gi|375148298|ref|YP_005010739.1| histone deacetylase [Niastella koreensis GR20-10]
gi|361062344|gb|AEW01336.1| Histone deacetylase [Niastella koreensis GR20-10]
Length = 307
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARII 53
G RRDELVF + ++RR+P V+ GGY I+
Sbjct: 256 GCRRRDELVFSQLKKRRIPCVVAMGGGYSPDIKTIV 291
>gi|359452419|ref|ZP_09241768.1| hypothetical protein P20495_0507 [Pseudoalteromonas sp. BSi20495]
gi|358050552|dbj|GAA78017.1| hypothetical protein P20495_0507 [Pseudoalteromonas sp. BSi20495]
Length = 302
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 2 VHTWMGDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARI 52
V W GD + L+ GII+RD LV + E +P+ + GGY K R+
Sbjct: 237 VDIWQGDGLGKLDISWDGIIKRDHLVLKRCLEHSIPVATVIGGGYDKDHLRL 288
>gi|359432950|ref|ZP_09223299.1| hypothetical protein P20652_1411 [Pseudoalteromonas sp. BSi20652]
gi|357920408|dbj|GAA59548.1| hypothetical protein P20652_1411 [Pseudoalteromonas sp. BSi20652]
Length = 302
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 2 VHTWMGDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARI 52
V W GD + L+ GI++RD LV + E +P+ + GGY K R+
Sbjct: 237 VDIWQGDGLGKLDISWDGIVKRDHLVLKRCLEHNIPVATVIGGGYDKDHLRL 288
>gi|255550810|ref|XP_002516453.1| histone deacetylase, putative [Ricinus communis]
gi|223544273|gb|EEF45794.1| histone deacetylase, putative [Ricinus communis]
Length = 342
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSG 43
GI RDE VF ARE+ P+VMLTSG
Sbjct: 309 GITARDEKVFRFAREKNAPLVMLTSG 334
>gi|409202838|ref|ZP_11231041.1| histone deacetylase [Pseudoalteromonas flavipulchra JG1]
Length = 301
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 2 VHTWMGDQVDMLE-DHLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARI 52
V W GD + L+ LGI +RD LV ++ VP+ + GGY K R+
Sbjct: 236 VDVWQGDNLGKLDISWLGIAKRDALVLTLCQKHGVPVATVIGGGYDKDHQRL 287
>gi|415911251|ref|ZP_11553390.1| Deacetylase, partial [Herbaspirillum frisingense GSF30]
gi|407762277|gb|EKF71157.1| Deacetylase, partial [Herbaspirillum frisingense GSF30]
Length = 177
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIA 54
G+ RDE VF ARE ++P+ + +GGY + + +A
Sbjct: 122 GLAARDETVFAYAREHKIPVAVTMAGGYGRDIEQTVA 158
>gi|94970928|ref|YP_592976.1| histone deacetylase superfamily protein [Candidatus Koribacter
versatilis Ellin345]
gi|94552978|gb|ABF42902.1| histone deacetylase superfamily [Candidatus Koribacter versatilis
Ellin345]
Length = 357
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIADSI 57
G+ RDELVF AR + +P+++ +GGY AR I D++
Sbjct: 302 GLKHRDELVFQAARAKGIPVMVTFAGGY----ARKIQDTV 337
>gi|405355313|ref|ZP_11024539.1| Deacetylase [Chondromyces apiculatus DSM 436]
gi|397091655|gb|EJJ22457.1| Deacetylase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 279
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 16 HLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARII 53
H G+ RD LV AR+R +P+V+ GGY K + I
Sbjct: 227 HAGLRERDRLVLEAARQRGIPVVLTLGGGYAKPLSATI 264
>gi|194289418|ref|YP_002005325.1| histone deacetylase [Cupriavidus taiwanensis LMG 19424]
gi|193223253|emb|CAQ69258.1| Histone deacetylase [Cupriavidus taiwanensis LMG 19424]
Length = 314
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 7 GDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIA 54
GD++ L+ + G+ RRD LVF A+ RR+P+ + +GGY Q +A
Sbjct: 235 GDRLGRLKLTMAGLARRDGLVFDAAQARRLPVAVTMAGGYGNQIEDTVA 283
>gi|414069842|ref|ZP_11405833.1| Deacetylase [Pseudoalteromonas sp. Bsw20308]
gi|410807805|gb|EKS13780.1| Deacetylase [Pseudoalteromonas sp. Bsw20308]
Length = 302
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 VHTWMGDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARI 52
V W GD + L+ GII+RD LV + E P+ + GGY K R+
Sbjct: 237 VDIWQGDGLGKLDISWDGIIKRDHLVLKRCLEHNTPVATVIGGGYDKDHLRL 288
>gi|430808555|ref|ZP_19435670.1| histone deacetylase superfamily protein [Cupriavidus sp. HMR-1]
gi|429499064|gb|EKZ97519.1| histone deacetylase superfamily protein [Cupriavidus sp. HMR-1]
Length = 307
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIA 54
G+ RRD +VF AR R +P+ + +GGY Q +A
Sbjct: 247 GLARRDTMVFEAARSRGLPVAVAMAGGYGNQIEDTVA 283
>gi|359440503|ref|ZP_09230417.1| hypothetical protein P20429_0778 [Pseudoalteromonas sp. BSi20429]
gi|358037538|dbj|GAA66666.1| hypothetical protein P20429_0778 [Pseudoalteromonas sp. BSi20429]
Length = 302
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 VHTWMGDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARI 52
V W GD + L+ GI++RD LV + E P+ + GGY K R+
Sbjct: 237 VDIWQGDGLGKLDISWDGIVKRDHLVLKRCLEHNTPVATVIGGGYDKDHLRL 288
>gi|113867397|ref|YP_725886.1| histone deacetylase family deacetylase [Ralstonia eutropha H16]
gi|113526173|emb|CAJ92518.1| Deacetylase, histone deacetylase family [Ralstonia eutropha H16]
Length = 369
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 7 GDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIA 54
GD++ L L G+ RRD LVF A R++P+ + +GGY Q +A
Sbjct: 298 GDRLGRLRLTLAGLARRDRLVFDAAHARQLPVAVAMAGGYGNQIEDTVA 346
>gi|339325544|ref|YP_004685237.1| deacetylase [Cupriavidus necator N-1]
gi|338165701|gb|AEI76756.1| deacetylase histone deacetylase family [Cupriavidus necator N-1]
Length = 352
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 7 GDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIA 54
GD++ L L G+ RRD LVF A R++P+ + +GGY Q +A
Sbjct: 281 GDRLGRLRLTLAGLARRDRLVFDAAHARQLPVAVAMAGGYGNQIEDTVA 329
>gi|300310969|ref|YP_003775061.1| deacetylase [Herbaspirillum seropedicae SmR1]
gi|300073754|gb|ADJ63153.1| deacetylase protein [Herbaspirillum seropedicae SmR1]
Length = 331
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 7 GDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARIIA 54
GD++ ++ L G+ RD+ VF ARE +P+ + +GGY ++ + +A
Sbjct: 250 GDRLGKMKLSLAGLAARDQAVFSYAREHEIPVAVTMAGGYGREIEQTVA 298
>gi|404493709|ref|YP_006717815.1| histone deacetylase family protein [Pelobacter carbinolicus DSM
2380]
gi|77545744|gb|ABA89306.1| histone deacetylase family protein [Pelobacter carbinolicus DSM
2380]
Length = 299
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 18 GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARII 53
GI RRDE V K RE +P+ ++ +GGY + ++++
Sbjct: 249 GIGRRDESVLSKCRESTIPVGVVMAGGYSRDLSKMV 284
>gi|392535978|ref|ZP_10283115.1| histone deacetylase [Pseudoalteromonas arctica A 37-1-2]
Length = 276
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 VHTWMGDQVDMLEDHL-GIIRRDELVFMKARERRVPIVMLTSGGYLKQTARI 52
V W GD + L+ GI++RD LV + E P+ + GGY K R+
Sbjct: 211 VDIWQGDGLGKLDISWDGIVKRDHLVLKRCLEHNTPVATVIGGGYDKDHLRL 262
>gi|431929908|ref|YP_007242954.1| succinate dehydrogenase, flavoprotein subunit [Thioflavicoccus
mobilis 8321]
gi|431828211|gb|AGA89324.1| succinate dehydrogenase, flavoprotein subunit [Thioflavicoccus
mobilis 8321]
Length = 587
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 2 VHTWMGDQVDMLEDHLGIIRRDELVF-----MKARERRVPIVMLTSGGYLKQTARIIADS 56
VH + ++EDH G+ R +E++ +KA RV V LT TARI A
Sbjct: 455 VHVVKAELRKLMEDHCGVFRTEEVMAEGVEKLKALRERVEGVRLTDHSRTFNTARIEALE 514
Query: 57 ILNLADLGLIS 67
+ NL D+G+ +
Sbjct: 515 LDNLVDVGMAT 525
>gi|288941677|ref|YP_003443917.1| succinate dehydrogenase or fumarate reductase, flavoprotein subunit
[Allochromatium vinosum DSM 180]
gi|288897049|gb|ADC62885.1| succinate dehydrogenase or fumarate reductase, flavoprotein subunit
[Allochromatium vinosum DSM 180]
Length = 587
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 12 MLEDHLGIIRRDELVF-----MKARERRVPIVMLTSGGYLKQTARIIADSILNLADLGL 65
+EDH G+ R +E++ ++A R+P V LT + TARI A + N+ D+GL
Sbjct: 465 CMEDHAGVFRTEEIMSEGVERLRALRDRLPEVRLTDHSKVFNTARIEALELENMVDVGL 523
>gi|108759310|ref|YP_629630.1| histone deacetylase [Myxococcus xanthus DK 1622]
gi|108463190|gb|ABF88375.1| histone deacetylase family protein [Myxococcus xanthus DK 1622]
Length = 299
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 16 HLGIIRRDELVFMKARERRVPIVMLTSGGYLKQTARII 53
H G+ RD LV AR+R +P V+ GGY K + I
Sbjct: 247 HAGLRARDRLVLEAARQRGIPAVLTLGGGYAKPLSATI 284
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.328 0.142 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 982,151,046
Number of Sequences: 23463169
Number of extensions: 28778615
Number of successful extensions: 86365
Number of sequences better than 100.0: 161
Number of HSP's better than 100.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 86211
Number of HSP's gapped (non-prelim): 162
length of query: 68
length of database: 8,064,228,071
effective HSP length: 40
effective length of query: 28
effective length of database: 7,125,701,311
effective search space: 199519636708
effective search space used: 199519636708
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)