BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8536
(186 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|112984380|ref|NP_001037514.1| caudal-like [Bombyx mori]
gi|521229|dbj|BAA04086.1| cad protein [Bombyx mori]
Length = 244
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/74 (93%), Positives = 72/74 (97%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFHYSRYITIRRKAELA SLGLSERQVKIWFQNRRAKE
Sbjct: 116 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQNRRAKE 175
Query: 61 RKQLKKREEVVIKD 74
RKQ+KKREEVV+K+
Sbjct: 176 RKQVKKREEVVMKE 189
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 28/36 (77%)
Query: 151 TSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+Y + KTRTKDKYRVVYSD QRLELEKEFHY
Sbjct: 106 PNYQTQPNPGKTRTKDKYRVVYSDHQRLELEKEFHY 141
>gi|321475788|gb|EFX86750.1| putative para-hox caudal protein [Daphnia pulex]
Length = 564
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 64/74 (86%), Positives = 71/74 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA+ LGLSERQVKIWFQNRRAKE
Sbjct: 422 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELASVLGLSERQVKIWFQNRRAKE 481
Query: 61 RKQLKKREEVVIKD 74
RKQ+KKREE++ K+
Sbjct: 482 RKQVKKREEMLHKE 495
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 422 KTRTKDKYRVVYTDHQRLELEKEFHY 447
>gi|452836056|gb|AGG14204.1| caudal protein [Periplaneta americana]
Length = 290
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/74 (89%), Positives = 70/74 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 189 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAANLGLSERQVKIWFQNRRAKE 248
Query: 61 RKQLKKREEVVIKD 74
RKQ+KKREE++ K
Sbjct: 249 RKQVKKREELLHKG 262
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVYSD QRLELEKEFHY
Sbjct: 189 KTRTKDKYRVVYSDHQRLELEKEFHY 214
>gi|86515350|ref|NP_001034498.1| caudal [Tribolium castaneum]
gi|3929892|emb|CAA06527.1| caudal protein [Tribolium castaneum]
Length = 249
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 73/79 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QR+ELEKEF+YSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE
Sbjct: 152 KTRTKDKYRVVYTDHQRVELEKEFYYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 211
Query: 61 RKQLKKREEVVIKDPSKDL 79
RKQ+KKREEV KD ++
Sbjct: 212 RKQVKKREEVTQKDSPMNM 230
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QR+ELEKEF+Y
Sbjct: 152 KTRTKDKYRVVYTDHQRVELEKEFYY 177
>gi|270006390|gb|EFA02838.1| caudal-2 [Tribolium castaneum]
Length = 112
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/79 (84%), Positives = 73/79 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QR+ELEKEF+YSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE
Sbjct: 8 KTRTKDKYRVVYTDHQRVELEKEFYYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 67
Query: 61 RKQLKKREEVVIKDPSKDL 79
RKQ+KKREEV KD ++
Sbjct: 68 RKQVKKREEVTQKDSPMNM 86
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QR+ELEKEF+Y
Sbjct: 8 KTRTKDKYRVVYTDHQRVELEKEFYY 33
>gi|52693900|dbj|BAD51739.1| caudal [Gryllus bimaculatus]
Length = 116
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/74 (90%), Positives = 71/74 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFHYSRYITIRRKAELA SLGLSERQVKIWFQNRRAKE
Sbjct: 19 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAASLGLSERQVKIWFQNRRAKE 78
Query: 61 RKQLKKREEVVIKD 74
RKQ+KKREE++ K+
Sbjct: 79 RKQVKKREELLHKE 92
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 142 SFRSSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+F ++ T + +L + KTRTKDKYRVVYSD QRLELEKEFHY
Sbjct: 1 AFPGAQLTGGAALLAVAG-KTRTKDKYRVVYSDHQRLELEKEFHY 44
>gi|340721613|ref|XP_003399212.1| PREDICTED: hypothetical protein LOC100651931 [Bombus terrestris]
Length = 605
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 64/74 (86%), Positives = 69/74 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 487 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAANLALSERQVKIWFQNRRAKE 546
Query: 61 RKQLKKREEVVIKD 74
RKQ+KKREE+ K+
Sbjct: 547 RKQVKKREELEQKE 560
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 126 LSNKVMIRKISVSPPFSFRSSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFH 185
+++ +R + P+ + TSY + KTRTKDKYRVVY+D QRLELEKEFH
Sbjct: 456 INSATSMRAAQIRSPYEWMKK----TSYQSHPNPGKTRTKDKYRVVYTDHQRLELEKEFH 511
Query: 186 Y 186
Y
Sbjct: 512 Y 512
>gi|405973631|gb|EKC38333.1| Homeobox protein CDX-1 [Crassostrea gigas]
Length = 329
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 68/75 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFHYSRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 171 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAQNLALSERQVKIWFQNRRAKE 230
Query: 61 RKQLKKREEVVIKDP 75
RKQ KKR+E+ +P
Sbjct: 231 RKQNKKRDEISPSNP 245
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 139 PPFSFRSSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
PP+ + + A S L KTRTKDKYRVVYSD QRLELEKEFHY
Sbjct: 152 PPYDWMKKTSYAPSGPL---PGKTRTKDKYRVVYSDHQRLELEKEFHY 196
>gi|38488502|emb|CAD98862.1| homeodomain transcription factor [Artemia franciscana]
Length = 315
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/74 (83%), Positives = 70/74 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHY++YITIRRK+ELA LGLSERQVKIWFQNRRAK+
Sbjct: 204 KTRTKDKYRVVYTDHQRLELEKEFHYNKYITIRRKSELATVLGLSERQVKIWFQNRRAKD 263
Query: 61 RKQLKKREEVVIKD 74
RKQ+KKREEV +K+
Sbjct: 264 RKQMKKREEVTVKE 277
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 124 LFLSNKVMIRKISVSPPFSFRSSETTATSYILDIDTR-KTRTKDKYRVVYSDQQRLELEK 182
S +M R +S+ P+ + + S+ ++ KTRTKDKYRVVY+D QRLELEK
Sbjct: 170 FIASPSMMQRPLSIRSPYEWMKKQ----SFHCNMPPGSKTRTKDKYRVVYTDHQRLELEK 225
Query: 183 EFHY 186
EFHY
Sbjct: 226 EFHY 229
>gi|383855394|ref|XP_003703198.1| PREDICTED: uncharacterized protein LOC100879814 [Megachile
rotundata]
Length = 345
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 68/75 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFH+SRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 201 KTRTKDKYRVVYTDHQRLELEKEFHFSRYITIRRKAELAANLALSERQVKIWFQNRRAKE 260
Query: 61 RKQLKKREEVVIKDP 75
RKQ KKREE+ K P
Sbjct: 261 RKQGKKREELDQKSP 275
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 29/36 (80%)
Query: 151 TSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
TSY + KTRTKDKYRVVY+D QRLELEKEFH+
Sbjct: 191 TSYQSQPNPGKTRTKDKYRVVYTDHQRLELEKEFHF 226
>gi|188508708|gb|ABA29777.3| caudal [Platynereis dumerilii]
Length = 349
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/71 (87%), Positives = 65/71 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRY TIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 180 KTRTKDKYRVVYTDHQRLELEKEFHYSRYTTIRRKAELAQTLNLSERQVKIWFQNRRAKE 239
Query: 61 RKQLKKREEVV 71
RKQ KKRE+ V
Sbjct: 240 RKQNKKREDAV 250
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 28/35 (80%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
SY + KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 171 SYPTTPASGKTRTKDKYRVVYTDHQRLELEKEFHY 205
>gi|47559173|gb|AAT35589.1| caudal [Strigamia maritima]
Length = 113
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 76/85 (89%), Gaps = 2/85 (2%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFHYSRYITIRRKAELA LGLSERQVKIWFQNRRAKE
Sbjct: 12 KTRTKDKYRVVYSDIQRLELEKEFHYSRYITIRRKAELAQLLGLSERQVKIWFQNRRAKE 71
Query: 61 RKQLKKREEVVIKDPSKDLFLSNKV 85
RKQ+KKREE+V K+ KD+ + + +
Sbjct: 72 RKQVKKREELVQKE--KDIVVHHHL 94
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 28/35 (80%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
SY + KTRTKDKYRVVYSD QRLELEKEFHY
Sbjct: 3 SYQTQCNPGKTRTKDKYRVVYSDIQRLELEKEFHY 37
>gi|198401791|gb|ACH87546.1| ParaHox [Platynereis dumerilii]
Length = 170
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 66/71 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAQTLNLSERQVKIWFQNRRAKE 60
Query: 61 RKQLKKREEVV 71
RKQ KKRE+ V
Sbjct: 61 RKQNKKREDAV 71
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHY 26
>gi|242005079|ref|XP_002423402.1| Antennapedia, putative [Pediculus humanus corporis]
gi|212506446|gb|EEB10664.1| Antennapedia, putative [Pediculus humanus corporis]
Length = 269
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/70 (88%), Positives = 68/70 (97%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA++LGLSERQVKIWFQNRRAKE
Sbjct: 134 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELASNLGLSERQVKIWFQNRRAKE 193
Query: 61 RKQLKKREEV 70
RKQ+K++EE
Sbjct: 194 RKQVKRKEET 203
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 117 IKDPSKDLFLSNKVMI---RKISVSPPFSFRSSETTATSYILDIDTRKTRTKDKYRVVYS 173
+ P + S ++ R SV P+ + T+Y + KTRTKDKYRVVY+
Sbjct: 91 VSSPGGEGLTSPNGLLMNQRPNSVRSPYEWMKK----TTYQSQPNPGKTRTKDKYRVVYT 146
Query: 174 DQQRLELEKEFHY 186
D QRLELEKEFHY
Sbjct: 147 DHQRLELEKEFHY 159
>gi|425918643|gb|AFY12010.1| caudal [Priapulus caudatus]
Length = 308
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/74 (85%), Positives = 68/74 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFHYSRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 211 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAQALQLSERQVKIWFQNRRAKE 270
Query: 61 RKQLKKREEVVIKD 74
RK KK++E+V K+
Sbjct: 271 RKTNKKKDEIVSKN 284
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVYSD QRLELEKEFHY
Sbjct: 211 KTRTKDKYRVVYSDHQRLELEKEFHY 236
>gi|255755665|dbj|BAH96558.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 313
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/67 (92%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 171 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAQALGLSERQVKIWFQNRRAKE 230
Query: 61 RKQLKKR 67
RKQ KKR
Sbjct: 231 RKQNKKR 237
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Query: 151 TSYILDIDTR---KTRTKDKYRVVYSDQQRLELEKEFHY 186
T+ +L + + KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 158 TTPVLSLQSHLNGKTRTKDKYRVVYTDHQRLELEKEFHY 196
>gi|259013416|ref|NP_001158415.1| caudal homeobox protein [Saccoglossus kowalevskii]
gi|196123799|gb|ACG70188.1| caudal homeobox protein [Saccoglossus kowalevskii]
Length = 358
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/67 (91%), Positives = 65/67 (97%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA++LGLSERQVKIWFQNRRAKE
Sbjct: 160 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAHALGLSERQVKIWFQNRRAKE 219
Query: 61 RKQLKKR 67
RKQ KK+
Sbjct: 220 RKQNKKK 226
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 10/79 (12%)
Query: 113 EEVVIKDPSKDLFLSNKVMIRKISVSP-----PFSFRSSETTATSYILDIDTRKTRTKDK 167
E + + P+ + +SN R S +P P+++ T Y + T KTRTKDK
Sbjct: 112 EPLAVASPTSAV-MSNLSQQRSASSTPHTSLDPYAWMRPAT----YNKNQQTGKTRTKDK 166
Query: 168 YRVVYSDQQRLELEKEFHY 186
YRVVY+D QRLELEKEFHY
Sbjct: 167 YRVVYTDHQRLELEKEFHY 185
>gi|45361263|ref|NP_989209.1| caudal type homeobox 2 [Xenopus (Silurana) tropicalis]
gi|16118862|gb|AAL14632.1|AF417197_1 cad1 [Xenopus (Silurana) tropicalis]
gi|38648967|gb|AAH63344.1| caudal type homeobox 2 [Xenopus (Silurana) tropicalis]
gi|89267401|emb|CAJ82366.1| caudal type homeo box transcription factor 2 [Xenopus (Silurana)
tropicalis]
Length = 252
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/67 (92%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+DQQRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 145 KTRTKDKYRVVYTDQQRLELEKEFHYSRYITIRRKAELAANLGLSERQVKIWFQNRRAKE 204
Query: 61 RKQLKKR 67
RK KKR
Sbjct: 205 RKITKKR 211
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+DQQRLELEKEFHY
Sbjct: 145 KTRTKDKYRVVYTDQQRLELEKEFHY 170
>gi|170037151|ref|XP_001846423.1| homeobox protein cdx [Culex quinquefasciatus]
gi|167880177|gb|EDS43560.1| homeobox protein cdx [Culex quinquefasciatus]
Length = 378
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/68 (89%), Positives = 64/68 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+DQQRLELEKEFHY+RYITIRRKAELA SL LSERQVKIWFQNRRAK+
Sbjct: 209 KTRTKDKYRVVYTDQQRLELEKEFHYTRYITIRRKAELAQSLQLSERQVKIWFQNRRAKD 268
Query: 61 RKQLKKRE 68
RKQ KK E
Sbjct: 269 RKQKKKTE 276
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+DQQRLELEKEFHY
Sbjct: 209 KTRTKDKYRVVYTDQQRLELEKEFHY 234
>gi|38016623|gb|AAR07645.1| transcription factor Cad, partial [Ptychodera flava]
Length = 256
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/67 (92%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 125 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELALALGLSERQVKIWFQNRRAKE 184
Query: 61 RKQLKKR 67
RKQ KKR
Sbjct: 185 RKQNKKR 191
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+Y + T KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 116 TYRANPQTGKTRTKDKYRVVYTDHQRLELEKEFHY 150
>gi|147902962|ref|NP_001089955.1| caudal type homeobox 2 [Xenopus laevis]
gi|84105447|gb|AAI11474.1| MGC130987 protein [Xenopus laevis]
Length = 256
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/67 (92%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+DQQRLELEKEFHYSRYITIRRKAELA LGLSERQVKIWFQNRRAKE
Sbjct: 149 KTRTKDKYRVVYTDQQRLELEKEFHYSRYITIRRKAELAVGLGLSERQVKIWFQNRRAKE 208
Query: 61 RKQLKKR 67
RK KKR
Sbjct: 209 RKINKKR 215
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 156 DIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+I KTRTKDKYRVVY+DQQRLELEKEFHY
Sbjct: 144 NIPGSKTRTKDKYRVVYTDQQRLELEKEFHY 174
>gi|25137519|dbj|BAC24090.1| caudal [Achaearanea tepidariorum]
Length = 300
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 68/74 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+TRTKDKYR+VY+D QRLELEKEFHYSRYITIRRK ELA SL LSERQ+KIWFQNRRAKE
Sbjct: 206 RTRTKDKYRIVYTDHQRLELEKEFHYSRYITIRRKVELAASLNLSERQIKIWFQNRRAKE 265
Query: 61 RKQLKKREEVVIKD 74
R+Q KKREE++ K+
Sbjct: 266 RRQAKKREELLQKN 279
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 151 TSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
TSY + +TRTKDKYR+VY+D QRLELEKEFHY
Sbjct: 196 TSYQSQPNPGRTRTKDKYRIVYTDHQRLELEKEFHY 231
>gi|48734588|gb|AAN11403.2| caudal parahox protein Nvcdx [Alitta virens]
Length = 114
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/71 (87%), Positives = 66/71 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAQNLNLSERQVKIWFQNRRAKE 60
Query: 61 RKQLKKREEVV 71
RKQ KKRE+ +
Sbjct: 61 RKQNKKREDGM 71
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHY 26
>gi|350404714|ref|XP_003487195.1| PREDICTED: hypothetical protein LOC100745452 [Bombus impatiens]
Length = 791
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/64 (90%), Positives = 61/64 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 672 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAANLALSERQVKIWFQNRRAKE 731
Query: 61 RKQL 64
RKQ+
Sbjct: 732 RKQV 735
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 126 LSNKVMIRKISVSPPFSFRSSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFH 185
+++ +R + P+ + TSY + KTRTKDKYRVVY+D QRLELEKEFH
Sbjct: 641 INSATSMRPAQIRSPYEWMKK----TSYQSHPNPGKTRTKDKYRVVYTDHQRLELEKEFH 696
Query: 186 Y 186
Y
Sbjct: 697 Y 697
>gi|157105774|ref|XP_001649020.1| homeobox protein cdx [Aedes aegypti]
gi|108868958|gb|EAT33183.1| AAEL014557-PA [Aedes aegypti]
Length = 333
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/72 (83%), Positives = 65/72 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+DQQRLELEKEFHY+RYITIRRK+ELA SL LSERQVKIWFQNRRAK+
Sbjct: 172 KTRTKDKYRVVYTDQQRLELEKEFHYTRYITIRRKSELAQSLQLSERQVKIWFQNRRAKD 231
Query: 61 RKQLKKREEVVI 72
RKQ KK E +
Sbjct: 232 RKQKKKAENGPV 243
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 127 SNKVMIRKISVSPPFSFRSSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
S ++ R V PF + + SY + KTRTKDKYRVVY+DQQRLELEKEFHY
Sbjct: 142 SPQIASRPTPVKSPFEWMKKQ----SYQSQPNPGKTRTKDKYRVVYTDQQRLELEKEFHY 197
>gi|45383526|ref|NP_989642.1| homeobox protein CDX-2 [Gallus gallus]
gi|1737445|gb|AAB38964.1| homeobox protein [Gallus gallus]
Length = 276
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/67 (91%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA+SLGLSERQVKIWFQNRRAKE
Sbjct: 174 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELASSLGLSERQVKIWFQNRRAKE 233
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 234 RKINKKK 240
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 174 KTRTKDKYRVVYTDHQRLELEKEFHY 199
>gi|126327413|ref|XP_001367105.1| PREDICTED: homeobox protein CDX-2-like [Monodelphis domestica]
Length = 302
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 173 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 232
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 233 RKINKKK 239
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 173 KTRTKDKYRVVYTDHQRLELEKEFHY 198
>gi|395520819|ref|XP_003764520.1| PREDICTED: homeobox protein CDX-2 [Sarcophilus harrisii]
Length = 298
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 173 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 232
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 233 RKINKKK 239
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 173 KTRTKDKYRVVYTDHQRLELEKEFHY 198
>gi|80479316|gb|AAI08597.1| Unknown (protein for MGC:131107) [Xenopus laevis]
Length = 254
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/67 (92%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+DQQRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 149 KTRTKDKYRVVYTDQQRLELEKEFHYSRYITIRRKAELAVNLGLSERQVKIWFQNRRAKE 208
Query: 61 RKQLKKR 67
RK KKR
Sbjct: 209 RKINKKR 215
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+DQQRLELEKEFHY
Sbjct: 149 KTRTKDKYRVVYTDQQRLELEKEFHY 174
>gi|126290572|ref|XP_001369246.1| PREDICTED: homeobox protein CDX-1-like [Monodelphis domestica]
Length = 270
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA SLGL+ERQVKIWFQNRRAKE
Sbjct: 149 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAVSLGLTERQVKIWFQNRRAKE 208
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 209 RKANKKK 215
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 147 SGKTRTKDKYRVVYTDHQRLELEKEFHY 174
>gi|31232313|ref|XP_318681.1| AGAP009646-PA [Anopheles gambiae str. PEST]
gi|4680233|gb|AAD27585.1|AF119382_1 caudal protein homolog [Anopheles gambiae]
gi|30174499|gb|EAA13881.2| AGAP009646-PA [Anopheles gambiae str. PEST]
Length = 394
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 64/68 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+DQQRLELEKEFHY+RYITIRRKAELA +L LSERQVKIWFQNRRAK+
Sbjct: 211 KTRTKDKYRVVYTDQQRLELEKEFHYTRYITIRRKAELAQNLQLSERQVKIWFQNRRAKD 270
Query: 61 RKQLKKRE 68
RKQ KK E
Sbjct: 271 RKQKKKAE 278
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 29/35 (82%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
SY + KTRTKDKYRVVY+DQQRLELEKEFHY
Sbjct: 202 SYQSQPNPGKTRTKDKYRVVYTDQQRLELEKEFHY 236
>gi|547649|sp|Q04649.1|CDX2_MESAU RecName: Full=Homeobox protein CDX-2; AltName: Full=Caudal-type
homeobox protein 2
gi|587458|emb|CAA57162.1| cdx3 [Mesocricetus auratus]
Length = 313
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 240
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 241 RKINKKK 247
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHY 206
>gi|327265418|ref|XP_003217505.1| PREDICTED: homeobox protein CDX-1-like isoform 2 [Anolis
carolinensis]
Length = 268
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 154 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLTERQVKIWFQNRRAKE 213
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 214 RKVNKKK 220
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 154 KTRTKDKYRVVYTDHQRLELEKEFHY 179
>gi|329665001|ref|NP_001193228.1| homeobox protein CDX-2 [Bos taurus]
Length = 306
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|327265416|ref|XP_003217504.1| PREDICTED: homeobox protein CDX-1-like isoform 1 [Anolis
carolinensis]
Length = 274
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 160 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLTERQVKIWFQNRRAKE 219
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 220 RKVNKKK 226
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 158 SGKTRTKDKYRVVYTDHQRLELEKEFHY 185
>gi|194221805|ref|XP_001915543.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-2-like [Equus
caballus]
Length = 309
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 174 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 233
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 234 RKINKKK 240
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 113 EEVVIKDPSKDLFLSNKVMIRKISVSPPFSFRSSETTATSYILDIDTR-KTRTKDKYRVV 171
E V+++DP DL ++S P R + T D KTRTKDKYRVV
Sbjct: 133 EPVLVRDP--DLGPPGG------NISWPALCRGTVPAETPGSACSDCVVKTRTKDKYRVV 184
Query: 172 YSDQQRLELEKEFHY 186
Y+D QRLELEKEFHY
Sbjct: 185 YTDHQRLELEKEFHY 199
>gi|327281671|ref|XP_003225570.1| PREDICTED: homeobox protein CDX-2-like, partial [Anolis
carolinensis]
Length = 157
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 60
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 61 RKINKKK 67
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHY 26
>gi|344284496|ref|XP_003414002.1| PREDICTED: homeobox protein CDX-2-like [Loxodonta africana]
Length = 310
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|11559418|dbj|BAB18778.1| caudal-type homeodomain protein [Gallus gallus]
Length = 248
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 133 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKE 192
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 193 RKVNKKK 199
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 130 SSGKTRTKDKYRVVYTDHQRLELEKEFHY 158
>gi|1170316|sp|P46692.1|HMD1_CHICK RecName: Full=Homeobox protein CHOX-CAD
gi|833605|emb|CAA40915.1| CHox-cad caudal homologue [Gallus gallus]
Length = 248
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 133 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKE 192
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 193 RKVNKKK 199
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 130 SSGKTRTKDKYRVVYTDHQRLELEKEFHY 158
>gi|449484370|ref|XP_004175127.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-2 [Taeniopygia
guttata]
Length = 271
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA++LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELASNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 229 RKINKKK 235
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 169 KTRTKDKYRVVYTDHQRLELEKEFHY 194
>gi|351697540|gb|EHB00459.1| Homeobox protein CDX-2 [Heterocephalus glaber]
Length = 311
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|390352056|ref|XP_789158.3| PREDICTED: uncharacterized protein LOC584191 [Strongylocentrotus
purpuratus]
Length = 400
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/66 (89%), Positives = 62/66 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELALALGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKK 66
RK KK
Sbjct: 242 RKMAKK 247
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 150 ATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+++Y + T KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 171 SSTYRFNPQTGKTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|256017155|ref|NP_990007.2| homeobox protein CDX-1 [Gallus gallus]
gi|116243034|sp|Q9DEB6.2|CDX1_CHICK RecName: Full=Homeobox protein CDX-1; AltName: Full=Caudal-type
homeodomain protein
Length = 260
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKE 204
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 205 RKVNKKK 211
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 143 SGKTRTKDKYRVVYTDHQRLELEKEFHY 170
>gi|99029087|gb|ABF60831.1| Cdx2 [Polypterus senegalus]
Length = 256
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+E+A SLGLSERQVKIWFQNRRAKE
Sbjct: 143 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSEIAMSLGLSERQVKIWFQNRRAKE 202
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 203 RKLAKKK 209
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 28/32 (87%)
Query: 155 LDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ ++ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 137 MSSNSGKTRTKDKYRVVYTDHQRLELEKEFHY 168
>gi|27528427|emb|CAD57266.1| caudal protein [Patella vulgata]
Length = 320
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 65/77 (84%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRV Y+D QRLELEKEFHYSRYITIRRKAE+A L LSERQVKIWFQNRRAKE
Sbjct: 161 KTRTKDKYRVAYTDHQRLELEKEFHYSRYITIRRKAEIAAQLALSERQVKIWFQNRRAKE 220
Query: 61 RKQLKKREEVVIKDPSK 77
RKQ KK +++ P K
Sbjct: 221 RKQNKKGKDMDGGMPGK 237
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 25/28 (89%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRV Y+D QRLELEKEFHY
Sbjct: 159 SGKTRTKDKYRVAYTDHQRLELEKEFHY 186
>gi|410947230|ref|XP_003980355.1| PREDICTED: homeobox protein CDX-2 [Felis catus]
Length = 345
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 214 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 273
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 274 RKINKKK 280
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 211 STVKTRTKDKYRVVYTDHQRLELEKEFHY 239
>gi|326928589|ref|XP_003210459.1| PREDICTED: homeobox protein CDX-1-like [Meleagris gallopavo]
Length = 260
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKE 204
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 205 RKVNKKK 211
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 27/29 (93%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
++ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 142 NSGKTRTKDKYRVVYTDHQRLELEKEFHY 170
>gi|291410372|ref|XP_002721469.1| PREDICTED: caudal type homeo box 2-like [Oryctolagus cuniculus]
Length = 314
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|348583387|ref|XP_003477454.1| PREDICTED: homeobox protein CDX-2-like [Cavia porcellus]
Length = 314
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|296481771|tpg|DAA23886.1| TPA: caudal type homeobox 2 [Bos taurus]
Length = 188
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 64 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 123
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 124 RKINKKK 130
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 64 KTRTKDKYRVVYTDHQRLELEKEFHY 89
>gi|297693754|ref|XP_002824180.1| PREDICTED: homeobox protein CDX-2 [Pongo abelii]
Length = 357
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 226 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 285
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 286 RKINKKK 292
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 226 KTRTKDKYRVVYTDHQRLELEKEFHY 251
>gi|13027412|ref|NP_076453.1| homeobox protein CDX-2 [Rattus norvegicus]
gi|9843871|emb|CAC03735.1| CDX2 protein [Rattus norvegicus]
gi|149034844|gb|EDL89564.1| caudal type homeo box 2 [Rattus norvegicus]
Length = 310
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 240
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 241 RKINKKK 247
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHY 206
>gi|403253998|ref|XP_003919770.1| PREDICTED: homeobox protein CDX-2 [Saimiri boliviensis boliviensis]
Length = 311
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|73993488|ref|XP_543154.2| PREDICTED: homeobox protein CDX-2 [Canis lupus familiaris]
Length = 314
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|449267150|gb|EMC78116.1| Homeobox protein CDX-1 [Columba livia]
Length = 247
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 132 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKE 191
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 192 RKVNKKK 198
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 129 SSGKTRTKDKYRVVYTDHQRLELEKEFHY 157
>gi|426375030|ref|XP_004054354.1| PREDICTED: homeobox protein CDX-2 [Gorilla gorilla gorilla]
gi|311033469|sp|Q99626.3|CDX2_HUMAN RecName: Full=Homeobox protein CDX-2; AltName: Full=CDX-3; AltName:
Full=Caudal-type homeobox protein 2
Length = 313
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|444313338|gb|ACY08854.2| caudal type homeobox 2 [Sus scrofa]
Length = 311
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|372624392|ref|NP_001256.3| homeobox protein CDX-2 [Homo sapiens]
gi|397495056|ref|XP_003818378.1| PREDICTED: homeobox protein CDX-2 [Pan paniscus]
gi|2193875|emb|CAA74038.1| caudal-type homeobox protein 2 [Homo sapiens]
gi|4154188|gb|AAD05200.1| caudal-type homeobox protein 2/3 [Homo sapiens]
gi|8574102|emb|CAB94779.1| caudal type homeobox transcription factor [Homo sapiens]
gi|15680219|gb|AAH14461.1| Caudal type homeobox 2 [Homo sapiens]
gi|119628827|gb|EAX08422.1| caudal type homeobox transcription factor 2 [Homo sapiens]
gi|123993901|gb|ABM84552.1| caudal type homeobox transcription factor 2 [synthetic construct]
gi|157928358|gb|ABW03475.1| caudal type homeobox 2 [synthetic construct]
gi|208965938|dbj|BAG72983.1| caudal type homeobox 2 [synthetic construct]
Length = 313
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|224067718|ref|XP_002198914.1| PREDICTED: homeobox protein CDX-1 [Taeniopygia guttata]
Length = 259
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 144 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKE 203
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 204 RKVNKKK 210
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 142 SGKTRTKDKYRVVYTDHQRLELEKEFHY 169
>gi|1777774|gb|AAB40603.1| homeobox protein Cdx2 [Homo sapiens]
Length = 311
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 180 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 239
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 240 RKINKKK 246
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 180 KTRTKDKYRVVYTDHQRLELEKEFHY 205
>gi|335296759|ref|XP_003130956.2| PREDICTED: homeobox protein CDX-2 [Sus scrofa]
Length = 311
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|109120279|ref|XP_001096874.1| PREDICTED: homeobox protein CDX-2 [Macaca mulatta]
gi|402901656|ref|XP_003913761.1| PREDICTED: homeobox protein CDX-2 [Papio anubis]
gi|355700894|gb|EHH28915.1| Caudal-type homeobox protein 2 [Macaca mulatta]
Length = 313
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>gi|332841143|ref|XP_522747.3| PREDICTED: homeobox protein CDX-2 [Pan troglodytes]
Length = 266
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 135 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 194
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 195 RKINKKK 201
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 135 KTRTKDKYRVVYTDHQRLELEKEFHY 160
>gi|395504842|ref|XP_003756755.1| PREDICTED: homeobox protein CDX-1 [Sarcophilus harrisii]
Length = 268
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/62 (93%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA SLGL+ERQVKIWFQNRRAKE
Sbjct: 149 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAVSLGLTERQVKIWFQNRRAKE 208
Query: 61 RK 62
RK
Sbjct: 209 RK 210
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 147 SGKTRTKDKYRVVYTDHQRLELEKEFHY 174
>gi|395850205|ref|XP_003797686.1| PREDICTED: homeobox protein CDX-2 [Otolemur garnettii]
Length = 275
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 143 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 202
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 203 RKINKKK 209
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 143 KTRTKDKYRVVYTDHQRLELEKEFHY 168
>gi|426236763|ref|XP_004012337.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-2 [Ovis aries]
Length = 279
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 156 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 215
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 216 RKINKKK 222
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 156 KTRTKDKYRVVYTDHQRLELEKEFHY 181
>gi|348582989|ref|XP_003477258.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-1-like [Cavia
porcellus]
Length = 285
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 166 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 225
Query: 61 RK 62
RK
Sbjct: 226 RK 227
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 163 GSGKTRTKDKYRVVYTDHQRLELEKEFHY 191
>gi|355754594|gb|EHH58495.1| Caudal-type homeobox protein 2 [Macaca fascicularis]
Length = 322
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 191 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 250
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 251 RKINKKK 257
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 191 KTRTKDKYRVVYTDHQRLELEKEFHY 216
>gi|356991260|ref|NP_001239359.1| homeotic protein caudal [Apis mellifera]
gi|354549222|gb|AER27701.1| caudal [Apis mellifera]
Length = 358
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/63 (93%), Positives = 60/63 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA SL LSERQVKIWFQNRRAKE
Sbjct: 221 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELALSLSLSERQVKIWFQNRRAKE 280
Query: 61 RKQ 63
RKQ
Sbjct: 281 RKQ 283
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 29/36 (80%)
Query: 151 TSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
TSY + KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 211 TSYQSQPNPGKTRTKDKYRVVYTDHQRLELEKEFHY 246
>gi|345307979|ref|XP_001510359.2| PREDICTED: homeobox protein CDX-1-like [Ornithorhynchus anatinus]
Length = 250
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 135 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAANLGLTERQVKIWFQNRRAKE 194
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 195 RKVNKKK 201
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 28/36 (77%)
Query: 151 TSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
TS + KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 125 TSTVALGKAGKTRTKDKYRVVYTDHQRLELEKEFHY 160
>gi|380013481|ref|XP_003690784.1| PREDICTED: uncharacterized protein LOC100866555 isoform 1 [Apis
florea]
Length = 355
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/63 (93%), Positives = 60/63 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA SL LSERQVKIWFQNRRAKE
Sbjct: 218 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELALSLSLSERQVKIWFQNRRAKE 277
Query: 61 RKQ 63
RKQ
Sbjct: 278 RKQ 280
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 29/36 (80%)
Query: 151 TSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
TSY + KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 208 TSYQSQPNPGKTRTKDKYRVVYTDHQRLELEKEFHY 243
>gi|156120543|ref|NP_001095417.1| homeobox protein CDX-1 [Bos taurus]
gi|151554953|gb|AAI48006.1| CDX1 protein [Bos taurus]
Length = 265
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RKQLKK 66
RK KK
Sbjct: 210 RKVNKK 215
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|335371107|gb|AEH57082.1| Cdx [Bugula neritina]
Length = 278
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFHYSRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 167 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAITLNLSERQVKIWFQNRRAKE 226
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 227 RKLIKKK 233
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVYSD QRLELEKEFHY
Sbjct: 167 KTRTKDKYRVVYSDHQRLELEKEFHY 192
>gi|380013483|ref|XP_003690785.1| PREDICTED: uncharacterized protein LOC100866555 isoform 2 [Apis
florea]
Length = 367
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/63 (93%), Positives = 60/63 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA SL LSERQVKIWFQNRRAKE
Sbjct: 230 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELALSLSLSERQVKIWFQNRRAKE 289
Query: 61 RKQ 63
RKQ
Sbjct: 290 RKQ 292
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 230 KTRTKDKYRVVYTDHQRLELEKEFHY 255
>gi|201023307|ref|NP_001128397.1| caudal [Nasonia vitripennis]
Length = 399
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 67/74 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY++ QRLELEKEF+ SRYITIRRKAELA+SL LSERQVKIWFQNRRAK+
Sbjct: 240 KTRTKDKYRVVYTEHQRLELEKEFYSSRYITIRRKAELASSLALSERQVKIWFQNRRAKD 299
Query: 61 RKQLKKREEVVIKD 74
RKQ KKR E+ +D
Sbjct: 300 RKQSKKRGELEQRD 313
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFH 185
SY + KTRTKDKYRVVY++ QRLELEKEF+
Sbjct: 231 SYHNQPNPGKTRTKDKYRVVYTEHQRLELEKEFY 264
>gi|88604734|gb|ABD46738.1| homeobox protein caudal [Endeis spinosa]
Length = 152
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 71/80 (88%), Gaps = 4/80 (5%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT++KYRVVYSD QRLELEKEFHY+RYITIRRK+E+A+ LGLSERQ+KIWFQNRRAKE
Sbjct: 13 KTRTREKYRVVYSDHQRLELEKEFHYNRYITIRRKSEVASFLGLSERQIKIWFQNRRAKE 72
Query: 61 RKQLKKREEVV----IKDPS 76
RKQLKK +E+ + DP+
Sbjct: 73 RKQLKKLQELYSSPNMNDPT 92
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 27/31 (87%)
Query: 156 DIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
D+ KTRT++KYRVVYSD QRLELEKEFHY
Sbjct: 8 DVLLGKTRTREKYRVVYSDHQRLELEKEFHY 38
>gi|354468561|ref|XP_003496721.1| PREDICTED: homeobox protein CDX-2-like [Cricetulus griseus]
Length = 260
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 128 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 187
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 188 RKINKKK 194
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
Query: 152 SYILDIDTR---KTRTKDKYRVVYSDQQRLELEKEFHY 186
S +L + R KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 116 SALLQAENRRCLKTRTKDKYRVVYTDHQRLELEKEFHY 153
>gi|213624603|gb|AAI71327.1| caudal type homeobox 1 [Xenopus (Silurana) tropicalis]
gi|213625783|gb|AAI71326.1| caudal type homeobox 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA SL L+ERQVKIWFQNRRAKE
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAASLALTERQVKIWFQNRRAKE 204
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 205 RKVNKKK 211
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHY 170
>gi|392354733|ref|XP_344692.5| PREDICTED: homeobox protein CDX-1 [Rattus norvegicus]
Length = 280
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 157 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 216
Query: 61 RK 62
RK
Sbjct: 217 RK 218
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 157 KTRTKDKYRVVYTDHQRLELEKEFHY 182
>gi|440900644|gb|ELR51726.1| Homeobox protein CDX-2, partial [Bos grunniens mutus]
Length = 128
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 4 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 63
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 64 RKINKKK 70
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 1 STVKTRTKDKYRVVYTDHQRLELEKEFHY 29
>gi|431918037|gb|ELK17265.1| Homeobox protein CDX-1 [Pteropus alecto]
Length = 268
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 210 RKVNKKK 216
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|56605944|ref|NP_998001.2| caudal type homeo box transcription factor 1 a [Danio rerio]
gi|56381877|dbj|BAC54033.2| homeodomain protein Cdx1a [Danio rerio]
gi|133777490|gb|AAI15218.1| Cdx1a protein [Danio rerio]
Length = 228
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFH+SRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 125 KTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQNRRAKE 184
Query: 61 RKQLKKR 67
RK KKR
Sbjct: 185 RKMNKKR 191
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVYSD QRLELEKEFH+
Sbjct: 125 KTRTKDKYRVVYSDVQRLELEKEFHF 150
>gi|338713569|ref|XP_001501535.2| PREDICTED: homeobox protein CDX-1-like [Equus caballus]
Length = 163
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 46 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 105
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 106 RKVNKKK 112
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 141 FSFRSSETTATSYILD------IDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
F+ TA ++ L + T KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 20 FTPGPPRPTALTHALPPPSWAPVGTGKTRTKDKYRVVYTDHQRLELEKEFHY 71
>gi|426229896|ref|XP_004009019.1| PREDICTED: homeobox protein CDX-1 [Ovis aries]
Length = 265
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|296193234|ref|XP_002744411.1| PREDICTED: homeobox protein CDX-1 [Callithrix jacchus]
Length = 265
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|344265146|ref|XP_003404647.1| PREDICTED: homeobox protein CDX-1-like [Loxodonta africana]
Length = 265
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|301765550|ref|XP_002918208.1| PREDICTED: homeobox protein CDX-1-like [Ailuropoda melanoleuca]
Length = 204
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 89 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 148
Query: 61 RK 62
RK
Sbjct: 149 RK 150
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 89 KTRTKDKYRVVYTDHQRLELEKEFHY 114
>gi|45361677|ref|NP_989416.1| homeobox protein CDX-1 [Xenopus (Silurana) tropicalis]
gi|82217132|sp|Q90X89.1|CDX1_XENTR RecName: Full=Homeobox protein CDX-1
gi|16118864|gb|AAL14633.1|AF417198_1 cad2 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA SL L+ERQVKIWFQNRRAKE
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAASLALTERQVKIWFQNRRAKE 204
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 205 RKVNKKK 211
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHY 170
>gi|239915978|ref|NP_034010.3| homeobox protein CDX-1 [Mus musculus]
gi|1170313|sp|P18111.2|CDX1_MOUSE RecName: Full=Homeobox protein CDX-1; AltName: Full=Caudal-type
homeobox protein 1
Length = 268
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 210 RKVNKKK 216
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|214249|gb|AAA49746.1| homeobox gene, partial [Xenopus laevis]
Length = 157
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/67 (91%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+DQQRLELEKEFHYSRYITIRRKAELA +LGLSE QVKIWFQNRRAKE
Sbjct: 52 KTRTKDKYRVVYTDQQRLELEKEFHYSRYITIRRKAELAVNLGLSETQVKIWFQNRRAKE 111
Query: 61 RKQLKKR 67
RK KKR
Sbjct: 112 RKINKKR 118
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+DQQRLELEKEFHY
Sbjct: 52 KTRTKDKYRVVYTDQQRLELEKEFHY 77
>gi|118343697|ref|NP_001071669.1| transcription factor protein [Ciona intestinalis]
gi|70569082|dbj|BAE06346.1| transcription factor protein [Ciona intestinalis]
Length = 394
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEF +SRYITIRRKAELA L LSERQ+KIWFQNRRAKE
Sbjct: 211 KTRTKDKYRVVYSDHQRLELEKEFRFSRYITIRRKAELAGLLCLSERQIKIWFQNRRAKE 270
Query: 61 RKQLKKREEVVIKDPSKDL 79
RK KK E PSKD
Sbjct: 271 RKATKKTGE-----PSKDF 284
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/24 (95%), Positives = 23/24 (95%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEF 184
KTRTKDKYRVVYSD QRLELEKEF
Sbjct: 211 KTRTKDKYRVVYSDHQRLELEKEF 234
>gi|148922965|ref|NP_001092232.1| homeobox protein CDX-1 [Danio rerio]
gi|58891579|gb|AAW83121.1| caudal type homeodomain protein [Danio rerio]
gi|148744790|gb|AAI42878.1| Cdx1b protein [Danio rerio]
Length = 255
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 142 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELATALSLSERQVKIWFQNRRAKE 201
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 202 RKINKKK 208
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 142 KTRTKDKYRVVYTDHQRLELEKEFHY 167
>gi|185133866|ref|NP_001118104.1| caudal-type homeobox protein 1 [Oncorhynchus mykiss]
gi|38046362|gb|AAR09044.1| caudal-type homeobox protein 1 [Oncorhynchus mykiss]
Length = 269
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH++RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 146 KTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAGNLGLSERQVKIWFQNRRAKE 205
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 206 RKLIKKK 212
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTK+KYRVVY+D QRLELEKEFH+
Sbjct: 144 TGKTRTKEKYRVVYTDHQRLELEKEFHF 171
>gi|509231|emb|CAA48883.1| CHox-cad [Gallus gallus]
Length = 117
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 2 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKE 61
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 62 RKVNKKK 68
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 2 KTRTKDKYRVVYTDHQRLELEKEFHY 27
>gi|1777772|gb|AAB40602.1| homeobox protein Cdx1 [Homo sapiens]
Length = 265
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|121114296|ref|NP_001795.2| homeobox protein CDX-1 [Homo sapiens]
gi|116241291|sp|P47902.2|CDX1_HUMAN RecName: Full=Homeobox protein CDX-1; AltName: Full=Caudal-type
homeobox protein 1
gi|7341292|gb|AAF61234.1|AF239666_1 CDX1 homeobox protein [Homo sapiens]
gi|119582149|gb|EAW61745.1| caudal type homeobox transcription factor 1 [Homo sapiens]
Length = 265
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|348544229|ref|XP_003459584.1| PREDICTED: homeobox protein CDX-1-like [Oreochromis niloticus]
Length = 287
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYS+YITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 159 KTRTKDKYRVVYTDHQRLELEKEFHYSKYITIRRKAELATALSLSERQVKIWFQNRRAKE 218
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 219 RKINKKK 225
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 27/36 (75%)
Query: 151 TSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
TS KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 149 TSAPPSNPNGKTRTKDKYRVVYTDHQRLELEKEFHY 184
>gi|18043503|gb|AAH19986.1| Caudal type homeo box 1 [Mus musculus]
Length = 268
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 210 RKVNKKK 216
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|402308|gb|AAA16447.1| caudal type homeobox-1 [Mus musculus]
Length = 192
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 74 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 133
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 134 RKVNKKK 140
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 74 KTRTKDKYRVVYTDHQRLELEKEFHY 99
>gi|208965936|dbj|BAG72982.1| caudal type homeobox 1 [synthetic construct]
Length = 265
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|403285656|ref|XP_003934131.1| PREDICTED: homeobox protein CDX-1 [Saimiri boliviensis boliviensis]
Length = 259
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 143 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 202
Query: 61 RK 62
RK
Sbjct: 203 RK 204
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 28/33 (84%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+L D KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 136 MLGSDAGKTRTKDKYRVVYTDHQRLELEKEFHY 168
>gi|332822308|ref|XP_527071.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-1 [Pan
troglodytes]
Length = 267
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 152 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 211
Query: 61 RK 62
RK
Sbjct: 212 RK 213
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 152 KTRTKDKYRVVYTDHQRLELEKEFHY 177
>gi|444723684|gb|ELW64325.1| Homeobox protein CDX-1 [Tupaia chinensis]
Length = 218
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 103 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELATNLGLTERQVKIWFQNRRAKE 162
Query: 61 RK 62
RK
Sbjct: 163 RK 164
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 103 KTRTKDKYRVVYTDHQRLELEKEFHY 128
>gi|146286067|sp|A2T7H5.1|CDX1_PONPY RecName: Full=Homeobox protein CDX-1; AltName: Full=Caudal-type
homeobox protein 1
gi|124054131|gb|ABM89253.1| CDX1 [Pongo pygmaeus]
Length = 265
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|117570910|gb|ABK39927.1| caudal [Nasonia vitripennis]
Length = 381
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 67/74 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT+DKYRVVY++ QRLELEKEF+ SRYITIRRKAELA+SL LSERQVKIWFQNRRAK+
Sbjct: 222 KTRTRDKYRVVYTEHQRLELEKEFYSSRYITIRRKAELASSLALSERQVKIWFQNRRAKD 281
Query: 61 RKQLKKREEVVIKD 74
RKQ KKR E+ +D
Sbjct: 282 RKQSKKRGELEQRD 295
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFH 185
SY + KTRT+DKYRVVY++ QRLELEKEF+
Sbjct: 213 SYHNQPNPGKTRTRDKYRVVYTEHQRLELEKEFY 246
>gi|109079345|ref|XP_001108012.1| PREDICTED: homeobox protein CDX-1 [Macaca mulatta]
Length = 265
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|397517764|ref|XP_003829076.1| PREDICTED: homeobox protein CDX-1 [Pan paniscus]
Length = 276
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 161 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 220
Query: 61 RK 62
RK
Sbjct: 221 RK 222
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 161 KTRTKDKYRVVYTDHQRLELEKEFHY 186
>gi|395817256|ref|XP_003782089.1| PREDICTED: homeobox protein CDX-1 [Otolemur garnettii]
Length = 266
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELATNLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|402873066|ref|XP_003900407.1| PREDICTED: homeobox protein CDX-1 [Papio anubis]
Length = 265
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|281345661|gb|EFB21245.1| hypothetical protein PANDA_006595 [Ailuropoda melanoleuca]
Length = 178
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 63 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 122
Query: 61 RK 62
RK
Sbjct: 123 RK 124
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 63 KTRTKDKYRVVYTDHQRLELEKEFHY 88
>gi|293343102|ref|XP_001062129.2| PREDICTED: homeobox protein CDX-1 [Rattus norvegicus]
Length = 212
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 89 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 148
Query: 61 RK 62
RK
Sbjct: 149 RK 150
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 89 KTRTKDKYRVVYTDHQRLELEKEFHY 114
>gi|807157|gb|AAB32251.1| Cdx-2 [Mus sp.]
Length = 311
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFH+SRYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHFSRYITIRRKSELAATLGLSERQVKIWFQNRRAKE 240
Query: 61 RKQLKK 66
RK KK
Sbjct: 241 RKIKKK 246
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFH+
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHF 206
>gi|297676405|ref|XP_002816124.1| PREDICTED: homeobox protein CDX-1 [Pongo abelii]
Length = 265
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|335283779|ref|XP_003354406.1| PREDICTED: homeobox protein CDX-1-like [Sus scrofa]
Length = 263
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 148 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 207
Query: 61 RKQLKK 66
RK KK
Sbjct: 208 RKVNKK 213
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 148 KTRTKDKYRVVYTDHQRLELEKEFHY 173
>gi|595858|gb|AAC50237.1| caudal-type homeobox protein, partial [Homo sapiens]
Length = 203
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 88 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 147
Query: 61 RK 62
RK
Sbjct: 148 RK 149
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 88 KTRTKDKYRVVYTDHQRLELEKEFHY 113
>gi|432098810|gb|ELK28305.1| Homeobox protein CDX-1 [Myotis davidii]
Length = 136
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 16 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 75
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 76 RKVNKKK 82
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 16 KTRTKDKYRVVYTDHQRLELEKEFHY 41
>gi|335283791|ref|XP_003354410.1| PREDICTED: homeobox protein CDX-1-like [Sus scrofa]
Length = 263
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 148 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 207
Query: 61 RKQLKK 66
RK KK
Sbjct: 208 RKVNKK 213
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 148 KTRTKDKYRVVYTDHQRLELEKEFHY 173
>gi|31560722|ref|NP_031699.2| homeobox protein CDX-2 [Mus musculus]
gi|1170314|sp|P43241.1|CDX2_MOUSE RecName: Full=Homeobox protein CDX-2; AltName: Full=Caudal-type
homeobox protein 2
gi|494977|gb|AAA19645.1| Cdx-2 homeobox protein [Mus musculus]
gi|26340302|dbj|BAC33814.1| unnamed protein product [Mus musculus]
gi|73695237|gb|AAI03517.1| Caudal type homeo box 2 [Mus musculus]
gi|73695239|gb|AAI03521.1| Caudal type homeo box 2 [Mus musculus]
gi|73695241|gb|AAI03520.1| Caudal type homeo box 2 [Mus musculus]
gi|73695406|gb|AAI03518.1| Caudal type homeo box 2 [Mus musculus]
gi|148673883|gb|EDL05830.1| caudal type homeobox 2 [Mus musculus]
Length = 311
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFH+SRYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHFSRYITIRRKSELAATLGLSERQVKIWFQNRRAKE 240
Query: 61 RKQLKK 66
RK KK
Sbjct: 241 RKIKKK 246
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFH+
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHF 206
>gi|26340314|dbj|BAC33820.1| unnamed protein product [Mus musculus]
Length = 311
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFH+SRYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHFSRYITIRRKSELAATLGLSERQVKIWFQNRRAKE 240
Query: 61 RKQLKK 66
RK KK
Sbjct: 241 RKIKKK 246
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFH+
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHF 206
>gi|114054632|gb|ABI49991.1| caudal [Nasonia vitripennis]
Length = 223
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 67/74 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT+DKYRVVY++ QRLELEKEF+ SRYITIRRKAELA+SL LSERQVKIWFQNRRAK+
Sbjct: 64 KTRTRDKYRVVYTEHQRLELEKEFYSSRYITIRRKAELASSLALSERQVKIWFQNRRAKD 123
Query: 61 RKQLKKREEVVIKD 74
RKQ KKR E+ +D
Sbjct: 124 RKQSKKRGELEQRD 137
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFH 185
SY + KTRT+DKYRVVY++ QRLELEKEF+
Sbjct: 55 SYHNQPNPGKTRTRDKYRVVYTEHQRLELEKEFY 88
>gi|149064382|gb|EDM14585.1| caudal type homeo box 1 (predicted) [Rattus norvegicus]
Length = 138
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 15 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 74
Query: 61 RK 62
RK
Sbjct: 75 RK 76
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 15 KTRTKDKYRVVYTDHQRLELEKEFHY 40
>gi|1705740|sp|Q05095.1|CDX1_RAT RecName: Full=Homeobox protein CDX-1; AltName: Full=Caudal-type
homeobox protein 1
gi|203400|gb|AAA40907.1| CDX1 homeoprotein, partial [Rattus norvegicus]
Length = 123
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 60
Query: 61 RK 62
RK
Sbjct: 61 RK 62
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHY 26
>gi|359067693|ref|XP_003586380.1| PREDICTED: homeobox protein CDX-1 [Bos taurus]
gi|296485201|tpg|DAA27316.1| TPA: caudal type homeobox 1-like [Bos taurus]
Length = 132
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 17 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 76
Query: 61 RKQLKK 66
RK KK
Sbjct: 77 RKVNKK 82
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 17 KTRTKDKYRVVYTDHQRLELEKEFHY 42
>gi|6680914|ref|NP_031700.1| homeobox protein CDX-4 [Mus musculus]
gi|729725|sp|Q07424.1|CDX4_MOUSE RecName: Full=Homeobox protein CDX-4; AltName: Full=Caudal-type
homeobox protein 4
gi|388040|gb|AAA16901.1| homeobox protein [Mus musculus]
gi|21425588|emb|CAD33953.1| Cdx4 [Mus musculus]
gi|111600846|gb|AAI19159.1| Caudal type homeo box 4 [Mus musculus]
gi|148682161|gb|EDL14108.1| caudal type homeobox 4 [Mus musculus]
Length = 282
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 167 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 226
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 227 RKMIKKK 233
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 165 TGKTRTKEKYRVVYTDHQRLELEKEFH 191
>gi|426350678|ref|XP_004042897.1| PREDICTED: homeobox protein CDX-1 [Gorilla gorilla gorilla]
Length = 157
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 45 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 104
Query: 61 RK 62
RK
Sbjct: 105 RK 106
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 45 KTRTKDKYRVVYTDHQRLELEKEFHY 70
>gi|410949657|ref|XP_003981537.1| PREDICTED: homeobox protein CDX-1 [Felis catus]
Length = 253
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 140 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 199
Query: 61 RK 62
RK
Sbjct: 200 RK 201
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 26/31 (83%)
Query: 156 DIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 135 GCGSGKTRTKDKYRVVYTDHQRLELEKEFHY 165
>gi|73954198|ref|XP_855089.1| PREDICTED: homeobox protein CDX-1 [Canis lupus familiaris]
Length = 265
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>gi|49903787|gb|AAH76488.1| Cdx4 protein [Danio rerio]
gi|197246985|gb|AAI64427.1| Cdx4 protein [Danio rerio]
Length = 258
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH++RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 135 KTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 194
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 195 RKLIKKK 201
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTK+KYRVVY+D QRLELEKEFH+
Sbjct: 132 STGKTRTKEKYRVVYTDHQRLELEKEFHF 160
>gi|334350169|ref|XP_001370224.2| PREDICTED: hypothetical protein LOC100016363 [Monodelphis
domestica]
Length = 603
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/67 (82%), Positives = 61/67 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVYS+ QRLELEKEFH +RYI+IR+K ELA LGLSERQVKIWFQNRRAKE
Sbjct: 487 KTRTKEKYRVVYSEHQRLELEKEFHCNRYISIRKKTELAAQLGLSERQVKIWFQNRRAKE 546
Query: 61 RKQLKKR 67
RK LKK+
Sbjct: 547 RKLLKKK 553
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/25 (88%), Positives = 24/25 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
KTRTK+KYRVVYS+ QRLELEKEFH
Sbjct: 487 KTRTKEKYRVVYSEHQRLELEKEFH 511
>gi|157818679|ref|NP_001100412.1| homeobox protein CDX-4 [Rattus norvegicus]
gi|149055608|gb|EDM07192.1| caudal type homeo box 4 (predicted) [Rattus norvegicus]
Length = 288
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 173 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 232
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 233 RKMIKKK 239
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 171 TGKTRTKEKYRVVYTDHQRLELEKEFH 197
>gi|348515495|ref|XP_003445275.1| PREDICTED: homeobox protein CDX-4-like [Oreochromis niloticus]
Length = 271
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH++RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 147 KTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 206
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 207 RKLIKKK 213
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTK+KYRVVY+D QRLELEKEFH+
Sbjct: 145 TGKTRTKEKYRVVYTDHQRLELEKEFHF 172
>gi|224098338|ref|XP_002199238.1| PREDICTED: homeobox protein CDX-4 [Taeniopygia guttata]
Length = 260
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 145 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKE 204
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 205 RKMIKKK 211
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/25 (88%), Positives = 24/25 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 145 KTRTKEKYRVVYTDHQRLELEKEFH 169
>gi|335306201|ref|XP_003360417.1| PREDICTED: homeobox protein CDX-4-like [Sus scrofa]
Length = 284
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|432877585|ref|XP_004073172.1| PREDICTED: homeobox protein CDX-4-like [Oryzias latipes]
Length = 274
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH++RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 150 KTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 209
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 210 RKLIKKK 216
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTK+KYRVVY+D QRLELEKEFH+
Sbjct: 148 TGKTRTKEKYRVVYTDHQRLELEKEFHF 175
>gi|391339851|ref|XP_003744260.1| PREDICTED: uncharacterized protein LOC100898561 [Metaseiulus
occidentalis]
Length = 362
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEF++S+YITIRRKAELA +L LSERQVKIWFQNRRAK+
Sbjct: 196 KTRTKDKYRVVYTDHQRLELEKEFYHSKYITIRRKAELAAALDLSERQVKIWFQNRRAKD 255
Query: 61 RKQLKKR 67
RKQ KKR
Sbjct: 256 RKQEKKR 262
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEF++
Sbjct: 196 KTRTKDKYRVVYTDHQRLELEKEFYH 221
>gi|440901662|gb|ELR52561.1| Homeobox protein CDX-1, partial [Bos grunniens mutus]
Length = 173
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 58 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 117
Query: 61 RK 62
RK
Sbjct: 118 RK 119
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 58 KTRTKDKYRVVYTDHQRLELEKEFHY 83
>gi|162955846|gb|ABY25298.1| caudal [Empis livida]
Length = 420
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 62/69 (89%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+H SRYITIRRK ELA L LSERQVKIWFQNRRAKE
Sbjct: 233 KTRTKDKYRVVYTDFQRLELEKEYHTSRYITIRRKTELAQGLQLSERQVKIWFQNRRAKE 292
Query: 61 RKQLKKREE 69
RKQ KKR++
Sbjct: 293 RKQTKKRDD 301
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFH 185
+Y + KTRTKDKYRVVY+D QRLELEKE+H
Sbjct: 224 AYASQPNPGKTRTKDKYRVVYTDFQRLELEKEYH 257
>gi|187607954|ref|NP_001120328.1| uncharacterized protein LOC100145392 [Xenopus (Silurana)
tropicalis]
gi|319918830|ref|NP_571184.2| homeobox protein CDX-4 [Danio rerio]
gi|158253566|gb|AAI54242.1| Cdx4 protein [Danio rerio]
gi|169146089|emb|CAQ13437.1| caudal type homeo box transcription factor 4 [Danio rerio]
gi|169642536|gb|AAI60643.1| Cdx4 protein [Danio rerio]
gi|170285089|gb|AAI60957.1| LOC100145392 protein [Xenopus (Silurana) tropicalis]
Length = 270
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH++RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 147 KTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 206
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 207 RKLIKKK 213
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTK+KYRVVY+D QRLELEKEFH+
Sbjct: 144 STGKTRTKEKYRVVYTDHQRLELEKEFHF 172
>gi|309163|gb|AAA37412.1| Cdx-1 homeobox protein [Mus musculus]
Length = 192
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDK RVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 74 KTRTKDKSRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 133
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 134 RKVNKKK 140
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 25/31 (80%)
Query: 156 DIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDK RVVY+D QRLELEKEFHY
Sbjct: 69 GCGSGKTRTKDKSRVVYTDHQRLELEKEFHY 99
>gi|358419920|ref|XP_003584362.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-4-like [Bos
taurus]
gi|359081868|ref|XP_003588202.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-4-like [Bos
taurus]
Length = 285
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 170 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 229
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 230 RKMIKKK 236
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 168 TGKTRTKEKYRVVYTDHQRLELEKEFH 194
>gi|149757535|ref|XP_001505018.1| PREDICTED: homeobox protein CDX-4-like [Equus caballus]
Length = 284
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|291407703|ref|XP_002720160.1| PREDICTED: caudal type homeobox 4 [Oryctolagus cuniculus]
Length = 284
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|410929828|ref|XP_003978301.1| PREDICTED: homeobox protein CDX-1-like [Takifugu rubripes]
Length = 286
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYS+YITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 165 KTRTKDKYRVVYTDHQRLELEKEFHYSKYITIRRKSELATALSLSERQVKIWFQNRRAKE 224
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 225 RKINKKK 231
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 165 KTRTKDKYRVVYTDHQRLELEKEFHY 190
>gi|162955853|gb|ABY25302.1| caudal [Megaselia abdita]
gi|162955857|gb|ABY25304.1| caudal [Megaselia abdita]
Length = 326
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/71 (83%), Positives = 64/71 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKE+ +RYITIRRK+ELA SL LSERQVKIWFQNRRAKE
Sbjct: 180 KTRTKDKYRVVYSDFQRLELEKEYCTARYITIRRKSELATSLQLSERQVKIWFQNRRAKE 239
Query: 61 RKQLKKREEVV 71
RKQ KKR++ V
Sbjct: 240 RKQQKKRDDPV 250
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
SY KTRTKDKYRVVYSD QRLELEKE+
Sbjct: 171 SYPAQPTPGKTRTKDKYRVVYSDFQRLELEKEY 203
>gi|133777136|gb|AAH96252.2| CDX1 protein [Homo sapiens]
gi|133778066|gb|AAI27123.2| CDX1 protein [Homo sapiens]
Length = 154
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 39 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 98
Query: 61 RK 62
RK
Sbjct: 99 RK 100
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 39 KTRTKDKYRVVYTDHQRLELEKEFHY 64
>gi|162955855|gb|ABY25303.1| caudal' [Megaselia abdita]
Length = 344
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/71 (83%), Positives = 64/71 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKE+ +RYITIRRK+ELA SL LSERQVKIWFQNRRAKE
Sbjct: 198 KTRTKDKYRVVYSDFQRLELEKEYCTARYITIRRKSELATSLQLSERQVKIWFQNRRAKE 257
Query: 61 RKQLKKREEVV 71
RKQ KKR++ V
Sbjct: 258 RKQQKKRDDPV 268
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%)
Query: 147 ETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
ETT ++ KTRTKDKYRVVYSD QRLELEKE+
Sbjct: 184 ETTDSAASYGSRNGKTRTKDKYRVVYSDFQRLELEKEY 221
>gi|344250865|gb|EGW06969.1| hypothetical protein I79_013662 [Cricetulus griseus]
Length = 133
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 13 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 72
Query: 61 RK 62
RK
Sbjct: 73 RK 74
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 13 KTRTKDKYRVVYTDHQRLELEKEFHY 38
>gi|162955852|gb|ABY25301.1| caudal' [Megaselia abdita]
Length = 344
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/71 (83%), Positives = 64/71 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKE+ +RYITIRRK+ELA SL LSERQVKIWFQNRRAKE
Sbjct: 198 KTRTKDKYRVVYSDFQRLELEKEYCTARYITIRRKSELATSLQLSERQVKIWFQNRRAKE 257
Query: 61 RKQLKKREEVV 71
RKQ KKR++ V
Sbjct: 258 RKQQKKRDDPV 268
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%)
Query: 147 ETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
ETT ++ KTRTKDKYRVVYSD QRLELEKE+
Sbjct: 184 ETTDSAASYGSRNGKTRTKDKYRVVYSDFQRLELEKEY 221
>gi|354488562|ref|XP_003506437.1| PREDICTED: homeobox protein CDX-4-like [Cricetulus griseus]
Length = 221
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 106 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 165
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 166 RKMIKKK 172
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 146 SETTATSYILDIDTR-KTRTKDKYRVVYSDQQRLELEKEFH 185
S T T I D KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 90 SSTMGTVPINDXXXXXKTRTKEKYRVVYTDHQRLELEKEFH 130
>gi|940474|emb|CAA56695.1| cdx1 [Cyprinus carpio]
Length = 324
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/70 (81%), Positives = 65/70 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH++RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 147 KTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 206
Query: 61 RKQLKKREEV 70
RK +KK+ V
Sbjct: 207 RKLIKKKLGV 216
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTK+KYRVVY+D QRLELEKEFH+
Sbjct: 145 TGKTRTKEKYRVVYTDHQRLELEKEFHF 172
>gi|64654375|gb|AAH96251.1| CDX1 protein [Homo sapiens]
Length = 130
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 15 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 74
Query: 61 RK 62
RK
Sbjct: 75 RK 76
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 15 KTRTKDKYRVVYTDHQRLELEKEFHY 40
>gi|426257248|ref|XP_004022243.1| PREDICTED: homeobox protein CDX-4 [Ovis aries]
Length = 283
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 168 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 227
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 228 RKMIKKK 234
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 166 TGKTRTKEKYRVVYTDHQRLELEKEFH 192
>gi|121483826|gb|ABM54207.1| CDX1 [Pan paniscus]
Length = 116
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 60
Query: 61 RK 62
RK
Sbjct: 61 RK 62
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHY 26
>gi|345318998|ref|XP_001519561.2| PREDICTED: homeobox protein CDX-2-like [Ornithorhynchus anatinus]
Length = 117
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D+QRLELEKEFH+SRYITIRRKAELA LGLSERQVKIWFQNRRAKE
Sbjct: 4 KTRTKDKYRVVYTDRQRLELEKEFHFSRYITIRRKAELAVLLGLSERQVKIWFQNRRAKE 63
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 64 RKMNKKK 70
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTKDKYRVVY+D+QRLELEKEFH+
Sbjct: 2 TVKTRTKDKYRVVYTDRQRLELEKEFHF 29
>gi|440896407|gb|ELR48334.1| Homeobox protein CDX-4 [Bos grunniens mutus]
Length = 283
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 168 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 227
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 228 RKMIKKK 234
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 166 TGKTRTKEKYRVVYTDHQRLELEKEFH 192
>gi|441596171|ref|XP_003266413.2| PREDICTED: homeobox protein CDX-1 [Nomascus leucogenys]
Length = 130
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 15 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 74
Query: 61 RK 62
RK
Sbjct: 75 RK 76
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 15 KTRTKDKYRVVYTDHQRLELEKEFHY 40
>gi|354488421|ref|XP_003506368.1| PREDICTED: homeobox protein CDX-1-like [Cricetulus griseus]
Length = 125
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 5 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 64
Query: 61 RK 62
RK
Sbjct: 65 RK 66
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 157 IDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+D+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 1 MDSGKTRTKDKYRVVYTDHQRLELEKEFHY 30
>gi|62510|emb|CAA47380.1| Zf-cad1 protein [Danio rerio]
Length = 300
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 64/67 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH++RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 147 KTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 206
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 207 RKLIKKK 213
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTK+KYRVVY+D QRLELEKEFH+
Sbjct: 144 STGKTRTKEKYRVVYTDHQRLELEKEFHF 172
>gi|301789619|ref|XP_002930226.1| PREDICTED: homeobox protein CDX-4-like [Ailuropoda melanoleuca]
gi|281338735|gb|EFB14319.1| hypothetical protein PANDA_020604 [Ailuropoda melanoleuca]
Length = 284
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|162955844|gb|ABY25297.1| caudal [Lonchoptera lutea]
Length = 376
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 64/73 (87%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK ELA SL LSERQVKIWFQNRRAKE
Sbjct: 204 KTRTKDKYRVVYTDYQRLELEKEYCTSRYITIRRKTELAQSLQLSERQVKIWFQNRRAKE 263
Query: 61 RKQLKKREEVVIK 73
RKQ KKR++ +I
Sbjct: 264 RKQNKKRDDPLIG 276
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
SY KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 195 SYPTQPTPGKTRTKDKYRVVYTDYQRLELEKEY 227
>gi|403291711|ref|XP_003936915.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-4-like
[Saimiri boliviensis boliviensis]
Length = 284
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|162955848|gb|ABY25299.1| caudal, partial [Haematopota pluvialis]
Length = 181
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/68 (86%), Positives = 62/68 (91%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
TRTKDKYRVVY+D QRLELEKE+H SRYITIRRK ELA SL LSERQVKIWFQNRRAKER
Sbjct: 1 TRTKDKYRVVYTDFQRLELEKEYHTSRYITIRRKTELAQSLQLSERQVKIWFQNRRAKER 60
Query: 62 KQLKKREE 69
KQ KKRE+
Sbjct: 61 KQTKKRED 68
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 162 TRTKDKYRVVYSDQQRLELEKEFH 185
TRTKDKYRVVY+D QRLELEKE+H
Sbjct: 1 TRTKDKYRVVYTDFQRLELEKEYH 24
>gi|328710927|ref|XP_003244402.1| PREDICTED: hypothetical protein LOC100574453 [Acyrthosiphon pisum]
Length = 348
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 67/80 (83%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+TRTKDKYRVVY+D QRLELEKEFH++RYITI RK EL+ L LSERQVKIWFQNRRAK+
Sbjct: 253 RTRTKDKYRVVYTDLQRLELEKEFHFNRYITITRKTELSKMLSLSERQVKIWFQNRRAKQ 312
Query: 61 RKQLKKREEVVIKDPSKDLF 80
RK KKREE +I + SK L
Sbjct: 313 RKIDKKREETIINENSKQLI 332
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
+TRTKDKYRVVY+D QRLELEKEFH+
Sbjct: 253 RTRTKDKYRVVYTDLQRLELEKEFHF 278
>gi|95104785|gb|ABF51666.1| caudal homeobox gene 2 [Amia calva]
Length = 272
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 59/62 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFH +RYITIRRKA++A +LGLSERQVKIWFQNRRAKE
Sbjct: 149 KTRTKDKYRVVYSDHQRLELEKEFHSNRYITIRRKADIAATLGLSERQVKIWFQNRRAKE 208
Query: 61 RK 62
RK
Sbjct: 209 RK 210
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 6/42 (14%)
Query: 144 RSSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFH 185
RS++ A + + KTRTKDKYRVVYSD QRLELEKEFH
Sbjct: 138 RSAQPAANT------SGKTRTKDKYRVVYSDHQRLELEKEFH 173
>gi|449268974|gb|EMC79788.1| Homeobox protein CDX-4 [Columba livia]
Length = 260
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 145 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKE 204
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 205 RKLIKKK 211
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 143 TGKTRTKEKYRVVYTDHQRLELEKEFH 169
>gi|297710346|ref|XP_002831855.1| PREDICTED: homeobox protein CDX-4 [Pongo abelii]
Length = 284
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITI+RK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|432901053|ref|XP_004076784.1| PREDICTED: homeobox protein CDX-1-like, partial [Oryzias latipes]
Length = 158
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYS+YITIRRKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 32 KTRTKDKYRVVYTDHQRLELEKEFHYSKYITIRRKAELATALSLSERQVKIWFQNRRAKE 91
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 92 RKINKKK 98
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 32 KTRTKDKYRVVYTDHQRLELEKEFHY 57
>gi|4885127|ref|NP_005184.1| homeobox protein CDX-4 [Homo sapiens]
gi|3023467|sp|O14627.1|CDX4_HUMAN RecName: Full=Homeobox protein CDX-4; AltName: Full=Caudal-type
homeobox protein 4
gi|2314825|gb|AAB66319.1| homeobox protein CDX4 [Homo sapiens]
gi|4103945|gb|AAD01894.1| caudal-4 [Homo sapiens]
gi|118764215|gb|AAI28234.1| Caudal type homeobox 4 [Homo sapiens]
gi|119619073|gb|EAW98667.1| caudal type homeobox transcription factor 4 [Homo sapiens]
Length = 284
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITI+RK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|332861039|ref|XP_529040.3| PREDICTED: homeobox protein CDX-4 [Pan troglodytes]
Length = 284
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITI+RK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|397507928|ref|XP_003824432.1| PREDICTED: homeobox protein CDX-4 [Pan paniscus]
Length = 284
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITI+RK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|57112491|ref|XP_549080.1| PREDICTED: homeobox protein CDX-4 [Canis lupus familiaris]
Length = 326
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITI+RK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 211 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKE 270
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 271 RKTIKKK 277
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 209 TGKTRTKEKYRVVYTDHQRLELEKEFH 235
>gi|45361687|ref|NP_989417.1| caudal type homeobox 4 [Xenopus (Silurana) tropicalis]
gi|16118866|gb|AAL14634.1|AF417199_1 cad3 [Xenopus (Silurana) tropicalis]
gi|195540101|gb|AAI67866.1| caudal type homeobox 4 [Xenopus (Silurana) tropicalis]
gi|213624268|gb|AAI70865.1| caudal type homeobox 4 [Xenopus (Silurana) tropicalis]
gi|213624270|gb|AAI70869.1| caudal type homeobox 4 [Xenopus (Silurana) tropicalis]
Length = 260
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 61/67 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFHYSRYITIRRK ELA SL LSERQVKIWFQNRRAKE
Sbjct: 148 KTRTKEKYRVVYTDHQRLELEKEFHYSRYITIRRKTELAASLRLSERQVKIWFQNRRAKE 207
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 208 RKLFKKK 214
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ T KTRTK+KYRVVY+D QRLELEKEFHY
Sbjct: 141 VQSTSTGKTRTKEKYRVVYTDHQRLELEKEFHY 173
>gi|332239674|ref|XP_003269025.1| PREDICTED: homeobox protein CDX-4 [Nomascus leucogenys]
Length = 284
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYI IRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYIPIRRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|226372310|gb|ACO51780.1| Homeobox protein CDX-1 [Rana catesbeiana]
Length = 268
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFHYSRYITIRRK+ELA SL LSERQVKIWFQ+RRAKE
Sbjct: 145 KTRTKEKYRVVYADHQRLELEKEFHYSRYITIRRKSELAASLSLSERQVKIWFQDRRAKE 204
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 205 RKLFKKK 211
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTK+KYRVVY+D QRLELEKEFHY
Sbjct: 143 TGKTRTKEKYRVVYADHQRLELEKEFHY 170
>gi|296237706|ref|XP_002763862.1| PREDICTED: homeobox protein CDX-4-like [Callithrix jacchus]
Length = 284
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYR+VY+D QRLELEKEFH +RYIT RRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRIVYTDHQRLELEKEFHCNRYITTRRKSELAINLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/27 (81%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYR+VY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRIVYTDHQRLELEKEFH 193
>gi|355759206|gb|EHH61578.1| Caudal-type homeobox protein 4 [Macaca fascicularis]
Length = 284
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH + YITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNTYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|109131227|ref|XP_001095271.1| PREDICTED: homeobox protein CDX-4 [Macaca mulatta]
gi|355704924|gb|EHH30849.1| Caudal-type homeobox protein 4 [Macaca mulatta]
Length = 284
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH + YITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNTYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|344282008|ref|XP_003412767.1| PREDICTED: homeobox protein CDX-4-like [Loxodonta africana]
Length = 284
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITI+RK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|299473917|gb|ADJ18241.1| Cdx protein [Gibbula varia]
Length = 326
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 63/77 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRV YSD QRLELEKEF YSRYITIRRKAE+A L LSERQVKIWFQNRRAKE
Sbjct: 165 KTRTKDKYRVAYSDHQRLELEKEFRYSRYITIRRKAEIAAQLQLSERQVKIWFQNRRAKE 224
Query: 61 RKQLKKREEVVIKDPSK 77
RKQ KK ++ P K
Sbjct: 225 RKQNKKGKDGDSDMPGK 241
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 24/28 (85%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
T KTRTKDKYRV YSD QRLELEKEF Y
Sbjct: 163 TGKTRTKDKYRVAYSDHQRLELEKEFRY 190
>gi|74200872|dbj|BAE24796.1| unnamed protein product [Mus musculus]
Length = 125
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 10 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 69
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 70 RKMIKKK 76
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 8 TGKTRTKEKYRVVYTDHQRLELEKEFH 34
>gi|133777044|gb|AAH55999.2| Cdx4 protein [Xenopus laevis]
Length = 260
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 61/67 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFHYSRYITIRRK ELA +L LSERQVKIWFQNRRAKE
Sbjct: 148 KTRTKEKYRVVYTDHQRLELEKEFHYSRYITIRRKTELAANLRLSERQVKIWFQNRRAKE 207
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 208 RKLFKKK 214
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ T KTRTK+KYRVVY+D QRLELEKEFHY
Sbjct: 141 VQSTSTGKTRTKEKYRVVYTDHQRLELEKEFHY 173
>gi|80476282|gb|AAI08476.1| Cdx4 protein [Xenopus laevis]
Length = 260
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 61/67 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFHYSRYITIRRK ELA +L LSERQVKIWFQNRRAKE
Sbjct: 148 KTRTKEKYRVVYTDHQRLELEKEFHYSRYITIRRKTELAANLRLSERQVKIWFQNRRAKE 207
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 208 RKLFKKK 214
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ T KTRTK+KYRVVY+D QRLELEKEFHY
Sbjct: 141 VQSTSTGKTRTKEKYRVVYTDHQRLELEKEFHY 173
>gi|6088102|dbj|BAA85628.1| caudal homeoprotein [Halocynthia roretzi]
Length = 270
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/67 (85%), Positives = 61/67 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEFH+SRYITIRRK+ELA L LSERQ+KIWFQNRRAKE
Sbjct: 71 KTRTKDKYRVVYSDHQRLELEKEFHFSRYITIRRKSELAMQLSLSERQIKIWFQNRRAKE 130
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 131 RKISKKQ 137
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVYSD QRLELEKEFH+
Sbjct: 71 KTRTKDKYRVVYSDHQRLELEKEFHF 96
>gi|363732834|ref|XP_420293.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein CDX-1 [Gallus
gallus]
Length = 288
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT++KYRVVY+D QRLELEKEFHY+RYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 148 KTRTREKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKE 207
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 208 RKLMKKK 214
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ T KTRT++KYRVVY+D QRLELEKEFHY
Sbjct: 141 VQSTSTGKTRTREKYRVVYTDHQRLELEKEFHY 173
>gi|326924486|ref|XP_003208458.1| PREDICTED: homeobox protein CDX-4-like, partial [Meleagris
gallopavo]
Length = 217
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT++KYRVVY+D QRLELEKEFHY+RYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 86 KTRTREKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKE 145
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 146 RKLMKKK 152
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ T KTRT++KYRVVY+D QRLELEKEFHY
Sbjct: 79 VQSTSTGKTRTREKYRVVYTDHQRLELEKEFHY 111
>gi|426396438|ref|XP_004064450.1| PREDICTED: homeobox protein CDX-4 [Gorilla gorilla gorilla]
Length = 284
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH + YITI+RK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNGYITIQRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>gi|449268973|gb|EMC79787.1| Homeobox protein CDX-1 [Columba livia]
Length = 277
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT++KYRVVY+D QRLELEKEFHY+RYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 146 KTRTREKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKE 205
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 206 RKLMKKK 212
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ T KTRT++KYRVVY+D QRLELEKEFHY
Sbjct: 139 VQSTSTGKTRTREKYRVVYTDHQRLELEKEFHY 171
>gi|195117840|ref|XP_002003455.1| GI17922 [Drosophila mojavensis]
gi|193914030|gb|EDW12897.1| GI17922 [Drosophila mojavensis]
Length = 409
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA SL LSERQVKIWFQNRRAKE
Sbjct: 254 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQSLSLSERQVKIWFQNRRAKE 313
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 314 RKQNKKGSDAGV 325
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
SY KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 245 SYPSQPQPGKTRTKDKYRVVYTDFQRLELEKEY 277
>gi|443698902|gb|ELT98643.1| hypothetical protein CAPTEDRAFT_109027 [Capitella teleta]
Length = 338
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 67/78 (85%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYR+VYS+ Q++ELEKE+ YS+YITI+RKAEL+ S+GLSERQVKIWFQNRRAKE
Sbjct: 238 KTRTKDKYRIVYSEYQKVELEKEYLYSKYITIQRKAELSRSIGLSERQVKIWFQNRRAKE 297
Query: 61 RKQLKKREEVVIKDPSKD 78
RKQ +K EE + S D
Sbjct: 298 RKQKRKMEEALSTSDSSD 315
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 26/32 (81%)
Query: 155 LDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ + KTRTKDKYR+VYS+ Q++ELEKE+ Y
Sbjct: 232 MPLAMGKTRTKDKYRIVYSEYQKVELEKEYLY 263
>gi|147906827|ref|NP_001081175.1| homeobox protein CDX-1 [Xenopus laevis]
gi|82217505|sp|Q91622.1|CDX1_XENLA RecName: Full=Homeobox protein CDX-1; Short=xCAD2
gi|435578|gb|AAA03642.1| xCAD2 protein [Xenopus laevis]
Length = 263
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 58/62 (93%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
DKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKERK K
Sbjct: 151 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVNK 210
Query: 66 KR 67
K+
Sbjct: 211 KK 212
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 166 DKYRVVYSDQQRLELEKEFHY 186
DKYRVVY+D QRLELEKEFHY
Sbjct: 151 DKYRVVYTDHQRLELEKEFHY 171
>gi|148921643|gb|AAI46638.1| XCAD2 protein [Xenopus laevis]
Length = 263
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 58/62 (93%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
DKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKERK K
Sbjct: 151 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVNK 210
Query: 66 KR 67
K+
Sbjct: 211 KK 212
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 166 DKYRVVYSDQQRLELEKEFHY 186
DKYRVVY+D QRLELEKEFHY
Sbjct: 151 DKYRVVYTDHQRLELEKEFHY 171
>gi|7331262|gb|AAF60348.1|AF242305_1 Cdx [Herdmania curvata]
Length = 325
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 64/76 (84%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEF YSRYITIRRK+ELA+ L LSERQVKIWFQNRRAKE
Sbjct: 172 KTRTKDKYRVVYSDHQRLELEKEFRYSRYITIRRKSELASQLHLSERQVKIWFQNRRAKE 231
Query: 61 RKQLKKREEVVIKDPS 76
RK +K+ ++ S
Sbjct: 232 RKNNQKKTNEIVPSCS 247
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 24/26 (92%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVYSD QRLELEKEF Y
Sbjct: 172 KTRTKDKYRVVYSDHQRLELEKEFRY 197
>gi|307176605|gb|EFN66073.1| Homeobox protein CHOX-CAD [Camponotus floridanus]
Length = 221
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 65/74 (87%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFH + YITI+RKA+LA L L+ERQVKIWFQNRRAK+
Sbjct: 10 KTRTKDKYRVVYTDYQRLELEKEFHLNHYITIKRKADLALQLNLTERQVKIWFQNRRAKQ 69
Query: 61 RKQLKKREEVVIKD 74
RKQ+KK+EE +D
Sbjct: 70 RKQMKKQEEQRTRD 83
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 160 RKTRTKDKYRVVYSDQQRLELEKEFH 185
RKTRTKDKYRVVY+D QRLELEKEFH
Sbjct: 9 RKTRTKDKYRVVYTDYQRLELEKEFH 34
>gi|74054252|gb|AAZ95508.1| caudal protein [Capitella teleta]
Length = 338
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 65/71 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYR+VYS+ Q++ELEKE+ YS+YITI+RKAEL+ S+GLSERQVKIWFQNRRAKE
Sbjct: 238 KTRTKDKYRIVYSEYQKVELEKEYLYSKYITIQRKAELSRSIGLSERQVKIWFQNRRAKE 297
Query: 61 RKQLKKREEVV 71
RKQ +K EE +
Sbjct: 298 RKQKRKMEEAL 308
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 26/32 (81%)
Query: 155 LDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ + KTRTKDKYR+VYS+ Q++ELEKE+ Y
Sbjct: 232 MPLAMGKTRTKDKYRIVYSEYQKVELEKEYLY 263
>gi|212277764|gb|ACJ22965.1| putative caudal [Episyrphus balteatus]
Length = 369
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/71 (81%), Positives = 63/71 (88%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK ELA SL LSERQVKIWFQNRRAKE
Sbjct: 212 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKTELAQSLQLSERQVKIWFQNRRAKE 271
Query: 61 RKQLKKREEVV 71
RKQ KKR++ +
Sbjct: 272 RKQNKKRDDPM 282
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
SY KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 203 SYTAQPTPGKTRTKDKYRVVYTDFQRLELEKEY 235
>gi|31323437|gb|AAP47020.1| caudal ParaHox-CDX [Diplosoma listerianum]
Length = 435
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/66 (84%), Positives = 59/66 (89%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEF +SRYITIRR++ELA L LSERQVKIWFQNRRAKE
Sbjct: 224 KTRTKDKYRVVYSDHQRLELEKEFRFSRYITIRRRSELAEQLCLSERQVKIWFQNRRAKE 283
Query: 61 RKQLKK 66
RK KK
Sbjct: 284 RKASKK 289
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 24/26 (92%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVYSD QRLELEKEF +
Sbjct: 224 KTRTKDKYRVVYSDHQRLELEKEFRF 249
>gi|218156254|dbj|BAH03359.1| homeobox-contaning Cdx homolog [Lethenteron camtschaticum]
Length = 124
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/66 (83%), Positives = 60/66 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYR VYSD QR ELEKEFH++RYI IRRKAE+A SLGL+ERQVKIWFQNRRAKE
Sbjct: 1 KTRTKDKYRAVYSDHQRFELEKEFHFNRYINIRRKAEIAASLGLTERQVKIWFQNRRAKE 60
Query: 61 RKQLKK 66
RK +KK
Sbjct: 61 RKLIKK 66
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 23/26 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYR VYSD QR ELEKEFH+
Sbjct: 1 KTRTKDKYRAVYSDHQRFELEKEFHF 26
>gi|45382933|ref|NP_989945.1| caudal type homeobox 4 [Gallus gallus]
gi|13751864|gb|AAK38602.1|AF353624_1 caudal-type homeobox protein CDXB [Gallus gallus]
Length = 263
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 148 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKE 207
Query: 61 R 61
R
Sbjct: 208 R 208
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 146 TGKTRTKEKYRVVYTDHQRLELEKEFH 172
>gi|326924454|ref|XP_003208442.1| PREDICTED: homeobox protein CDX-4-like [Meleagris gallopavo]
Length = 263
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 58/61 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 148 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKE 207
Query: 61 R 61
R
Sbjct: 208 R 208
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 146 TGKTRTKEKYRVVYTDHQRLELEKEFH 172
>gi|195434014|ref|XP_002064998.1| GK14914 [Drosophila willistoni]
gi|194161083|gb|EDW75984.1| GK14914 [Drosophila willistoni]
Length = 415
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 266 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLALSERQVKIWFQNRRAKE 325
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 326 RKQNKKGSDPNV 337
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+Y KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 257 AYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEY 289
>gi|195035559|ref|XP_001989245.1| GH11619 [Drosophila grimshawi]
gi|193905245|gb|EDW04112.1| GH11619 [Drosophila grimshawi]
Length = 442
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA SL LSERQVKIWFQNRRAKE
Sbjct: 282 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQSLSLSERQVKIWFQNRRAKE 341
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 342 RKQNKKGSDPNV 353
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+ ++ KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 275 MCNMPEGKTRTKDKYRVVYTDFQRLELEKEY 305
>gi|194878715|ref|XP_001974115.1| GG21252 [Drosophila erecta]
gi|190657302|gb|EDV54515.1| GG21252 [Drosophila erecta]
Length = 439
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 281 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 340
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 341 RKQNKKGSDPGV 352
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
S +LD + KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 273 SELLDA-SGKTRTKDKYRVVYTDFQRLELEKEY 304
>gi|195388022|ref|XP_002052691.1| GJ17694 [Drosophila virilis]
gi|194149148|gb|EDW64846.1| GJ17694 [Drosophila virilis]
Length = 447
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/69 (82%), Positives = 61/69 (88%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA SL LSERQVKIWFQNRRAKE
Sbjct: 292 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQSLSLSERQVKIWFQNRRAKE 351
Query: 61 RKQLKKREE 69
RKQ KK +
Sbjct: 352 RKQNKKGSD 360
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEF 184
KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 292 KTRTKDKYRVVYTDFQRLELEKEY 315
>gi|395545832|ref|XP_003774801.1| PREDICTED: homeobox protein CDX-4 [Sarcophilus harrisii]
Length = 277
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 61/67 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVYS+ QRLELEKEFH +RYI+IR+K ELA LGLSERQVKIWFQNRRAKE
Sbjct: 161 KTRTKEKYRVVYSEHQRLELEKEFHCNRYISIRKKTELAVQLGLSERQVKIWFQNRRAKE 220
Query: 61 RKQLKKR 67
RK LKK+
Sbjct: 221 RKLLKKK 227
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 127 SNKVMIRKISVSPPFSFRSSETTATSYILDID----------TRKTRTKDKYRVVYSDQQ 176
SN V V PP + +E T+ + + KTRTK+KYRVVYS+ Q
Sbjct: 117 SNLVRPESSGVVPPENMEFTEPTSNPPNIGGPYAWMSKTLHVSGKTRTKEKYRVVYSEHQ 176
Query: 177 RLELEKEFH 185
RLELEKEFH
Sbjct: 177 RLELEKEFH 185
>gi|115530368|emb|CAL49392.1| caudal type homeo box transcription factor 1 [Xenopus (Silurana)
tropicalis]
Length = 202
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 55/58 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRA 58
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA SL L+ERQVKIWFQNRRA
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAASLALTERQVKIWFQNRRA 202
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHY 170
>gi|17136864|ref|NP_476954.1| caudal, isoform A [Drosophila melanogaster]
gi|19549891|ref|NP_599128.1| caudal, isoform B [Drosophila melanogaster]
gi|67476449|sp|P09085.4|CAD_DROME RecName: Full=Homeotic protein caudal
gi|7298711|gb|AAF53923.1| caudal, isoform A [Drosophila melanogaster]
gi|17862466|gb|AAL39710.1| LD29596p [Drosophila melanogaster]
gi|22946938|gb|AAN11088.1| caudal, isoform B [Drosophila melanogaster]
gi|220942294|gb|ACL83690.1| cad-PA [synthetic construct]
gi|220952506|gb|ACL88796.1| cad-PA [synthetic construct]
Length = 427
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 269 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 328
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 329 RKQNKKGSDPNV 340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+Y KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 260 AYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEY 292
>gi|195580497|ref|XP_002080072.1| GD24280 [Drosophila simulans]
gi|194192081|gb|EDX05657.1| GD24280 [Drosophila simulans]
Length = 440
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 282 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 341
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 342 RKQNKKGSDPNV 353
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 27/31 (87%), Gaps = 1/31 (3%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+LD + KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 276 LLDA-SGKTRTKDKYRVVYTDFQRLELEKEY 305
>gi|442628647|ref|NP_001260641.1| caudal, isoform C [Drosophila melanogaster]
gi|440214007|gb|AGB93176.1| caudal, isoform C [Drosophila melanogaster]
Length = 445
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 287 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 346
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 347 RKQNKKGSDPNV 358
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 27/31 (87%), Gaps = 1/31 (3%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+LD + KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 281 LLDA-SGKTRTKDKYRVVYTDFQRLELEKEY 310
>gi|195485810|ref|XP_002091242.1| GE12346 [Drosophila yakuba]
gi|194177343|gb|EDW90954.1| GE12346 [Drosophila yakuba]
Length = 437
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 279 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 338
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 339 RKQNKKGSDPNV 350
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
S +LD + KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 271 SELLDA-SGKTRTKDKYRVVYTDFQRLELEKEY 302
>gi|54399754|gb|AAV34195.1| ParaHox CDX [Diplosoma listerianum]
Length = 158
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/66 (84%), Positives = 59/66 (89%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEF +SRYITIRR++ELA L LSERQVKIWFQNRRAKE
Sbjct: 76 KTRTKDKYRVVYSDHQRLELEKEFRFSRYITIRRRSELAEQLCLSERQVKIWFQNRRAKE 135
Query: 61 RKQLKK 66
RK KK
Sbjct: 136 RKASKK 141
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 138 SPPFSFRSSETTATSYILDIDTR--KTRTKDKYRVVYSDQQRLELEKEFHY 186
+PP R E + + L+ T+ KTRTKDKYRVVYSD QRLELEKEF +
Sbjct: 51 TPPSQRRPFEWISKNAYLNPQTQRGKTRTKDKYRVVYSDHQRLELEKEFRF 101
>gi|198474911|ref|XP_001356856.2| GA14567 [Drosophila pseudoobscura pseudoobscura]
gi|198138603|gb|EAL33922.2| GA14567 [Drosophila pseudoobscura pseudoobscura]
Length = 413
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 258 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 317
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 318 RKQNKKGSDPNV 329
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+Y KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 249 AYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEY 281
>gi|327288346|ref|XP_003228889.1| PREDICTED: vascular endothelial growth factor receptor 1-like
[Anolis carolinensis]
Length = 307
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT +KYR+VYSD QRLELEKEFHY+RYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 186 KTRTTEKYRIVYSDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKE 245
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 246 RKLMKKK 252
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRT +KYR+VYSD QRLELEKEFHY
Sbjct: 186 KTRTTEKYRIVYSDHQRLELEKEFHY 211
>gi|155676514|emb|CAO86062.1| caudal type homeobox transcription factor 2 [Sus scrofa]
Length = 75
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/58 (93%), Positives = 56/58 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRA 58
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRA
Sbjct: 18 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRA 75
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 18 KTRTKDKYRVVYTDHQRLELEKEFHY 43
>gi|194759983|ref|XP_001962221.1| GF15355 [Drosophila ananassae]
gi|190615918|gb|EDV31442.1| GF15355 [Drosophila ananassae]
Length = 440
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 283 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 342
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 343 RKQNKKGSDPNV 354
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
S +LD + KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 275 SELLD-SSGKTRTKDKYRVVYTDFQRLELEKEY 306
>gi|195148552|ref|XP_002015237.1| GL18519 [Drosophila persimilis]
gi|194107190|gb|EDW29233.1| GL18519 [Drosophila persimilis]
Length = 411
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 256 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 315
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 316 RKQNKKGSDPNV 327
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+Y KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 247 AYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEY 279
>gi|195351929|ref|XP_002042468.1| GM23369 [Drosophila sechellia]
gi|194124337|gb|EDW46380.1| GM23369 [Drosophila sechellia]
Length = 207
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 61/69 (88%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 49 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 108
Query: 61 RKQLKKREE 69
RKQ KK +
Sbjct: 109 RKQNKKGSD 117
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
S +LD + KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 41 SDLLDA-SGKTRTKDKYRVVYTDFQRLELEKEY 72
>gi|149619283|ref|XP_001519363.1| PREDICTED: homeobox protein CDX-4-like, partial [Ornithorhynchus
anatinus]
Length = 116
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/67 (80%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT++KYRVVY+D QRLELEKEF +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 1 KTRTREKYRVVYTDHQRLELEKEFRCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKE 60
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 61 RKMIKKK 67
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/24 (83%), Positives = 23/24 (95%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEF 184
KTRT++KYRVVY+D QRLELEKEF
Sbjct: 1 KTRTREKYRVVYTDHQRLELEKEF 24
>gi|442628651|ref|NP_001260643.1| caudal, isoform E [Drosophila melanogaster]
gi|440214009|gb|AGB93178.1| caudal, isoform E [Drosophila melanogaster]
Length = 170
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 61/69 (88%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 12 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 71
Query: 61 RKQLKKREE 69
RKQ KK +
Sbjct: 72 RKQNKKGSD 80
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEF 184
KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 12 KTRTKDKYRVVYTDFQRLELEKEY 35
>gi|214251|gb|AAA49747.1| homeobox gene, partial [Xenopus laevis]
Length = 141
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 58/62 (93%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
DKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKERK K
Sbjct: 29 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVNK 88
Query: 66 KR 67
K+
Sbjct: 89 KK 90
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 166 DKYRVVYSDQQRLELEKEFHY 186
DKYRVVY+D QRLELEKEFHY
Sbjct: 29 DKYRVVYTDHQRLELEKEFHY 49
>gi|241630173|ref|XP_002410149.1| homeobox protein cdx, putative [Ixodes scapularis]
gi|215503324|gb|EEC12818.1| homeobox protein cdx, putative [Ixodes scapularis]
Length = 59
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/58 (94%), Positives = 55/58 (94%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
DKYRVVYSD QRLELEKEFHYSRYITIRRKAELA LGLSERQVKIWFQNRRAKERKQ
Sbjct: 1 DKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAALLGLSERQVKIWFQNRRAKERKQ 58
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/21 (95%), Positives = 20/21 (95%)
Query: 166 DKYRVVYSDQQRLELEKEFHY 186
DKYRVVYSD QRLELEKEFHY
Sbjct: 1 DKYRVVYSDHQRLELEKEFHY 21
>gi|3929894|emb|CAA06528.1| caudal protein [Tribolium castaneum]
Length = 287
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHY-SRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
KTRTKDKYRVVY+D QR+ELEKEF + S+YITI+RK+ELA +LGLSERQ+KIWFQNRRAK
Sbjct: 152 KTRTKDKYRVVYTDLQRIELEKEFTFVSKYITIKRKSELAENLGLSERQIKIWFQNRRAK 211
Query: 60 ERKQLKKREE 69
ERKQ KKR E
Sbjct: 212 ERKQNKKRIE 221
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEF 184
KTRTKDKYRVVY+D QR+ELEKEF
Sbjct: 152 KTRTKDKYRVVYTDLQRIELEKEF 175
>gi|270006389|gb|EFA02837.1| caudal-1 [Tribolium castaneum]
Length = 285
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHY-SRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
KTRTKDKYRVVY+D QR+ELEKEF + S+YITI+RK+ELA +LGLSERQ+KIWFQNRRAK
Sbjct: 152 KTRTKDKYRVVYTDLQRIELEKEFTFVSKYITIKRKSELAENLGLSERQIKIWFQNRRAK 211
Query: 60 ERKQLKKREE 69
ERKQ KKR E
Sbjct: 212 ERKQNKKRIE 221
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEF 184
KTRTKDKYRVVY+D QR+ELEKEF
Sbjct: 152 KTRTKDKYRVVYTDLQRIELEKEF 175
>gi|151935653|gb|ABS18808.1| caudal [Flaccisagitta enflata]
Length = 287
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+TRTKDKYRVVYSD QR+ELEKE+ S YITI+RKAELA +L LSERQVKIWFQNRRAKE
Sbjct: 11 RTRTKDKYRVVYSDHQRIELEKEYLQSPYITIKRKAELAQTLDLSERQVKIWFQNRRAKE 70
Query: 61 RKQLKKREEVVIKDPSKD 78
RKQ KK + D KD
Sbjct: 71 RKQFKK--DSSASDSGKD 86
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 24/26 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEF 184
R+TRTKDKYRVVYSD QR+ELEKE+
Sbjct: 9 ARRTRTKDKYRVVYSDHQRIELEKEY 34
>gi|410913897|ref|XP_003970425.1| PREDICTED: homeobox protein CDX-1-like [Takifugu rubripes]
Length = 225
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D+QR+ELE+EF +RYIT+RRKAEL+ +LGLSERQ+KIWFQNRRAKE
Sbjct: 118 KTRTKDKYRVVYTDKQRMELEREFQSNRYITMRRKAELSITLGLSERQIKIWFQNRRAKE 177
Query: 61 RKQLKKR 67
RK +K+
Sbjct: 178 RKMNRKK 184
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
I + KTRTKDKYRVVY+D+QR+ELE+EF
Sbjct: 111 IRPTASGKTRTKDKYRVVYTDKQRMELEREF 141
>gi|348535558|ref|XP_003455267.1| PREDICTED: homeobox protein CHOX-CAD-like [Oreochromis niloticus]
Length = 227
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QR+ELEKEF ++RYIT+RRK+EL+ +L LSERQVKIWFQNRRAKE
Sbjct: 119 KTRTKDKYRVVYTDHQRMELEKEFQFNRYITMRRKSELSMALSLSERQVKIWFQNRRAKE 178
Query: 61 ----RKQLKKREEVVIKDPSKDLFLSN 83
RK+L+ ++ P+ + ++
Sbjct: 179 RKINRKKLQHSQQASTTTPTPPVLCAH 205
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 24/26 (92%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QR+ELEKEF +
Sbjct: 119 KTRTKDKYRVVYTDHQRMELEKEFQF 144
>gi|50400184|gb|AAT76439.1| caudal, partial [Euscorpius flavicaudis]
Length = 79
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 13 SDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKREEVVI 72
+D QRLELEKEFHYSRYITIRRK+ELA+SLGLSERQVKIWFQNRRAKERKQ KK EE+V
Sbjct: 1 TDHQRLELEKEFHYSRYITIRRKSELASSLGLSERQVKIWFQNRRAKERKQAKKHEEIVQ 60
Query: 73 KD 74
K+
Sbjct: 61 KE 62
>gi|157045|gb|AAA28409.1| caudal protein [Drosophila melanogaster]
Length = 472
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 59/69 (85%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 239 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 298
Query: 61 RKQLKKREE 69
R KK +
Sbjct: 299 RTSNKKGSD 307
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+Y KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 230 AYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEY 262
>gi|3121834|sp|P81193.1|CDX_LINSA RecName: Full=Homeobox protein CDX; AltName: Full=Caudal-type
homeobox protein; AltName: Full=LSCDX
Length = 70
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
DKYRVVY+D QRLELEKEFHYSRYIT+ RKAELA SL L+ERQ+KIWFQNRRAKERK +
Sbjct: 2 DKYRVVYTDYQRLELEKEFHYSRYITMNRKAELAKSLDLTERQIKIWFQNRRAKERK-IN 60
Query: 66 KREEVVIKDP 75
K+++V++K+P
Sbjct: 61 KKKDVMVKEP 70
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 166 DKYRVVYSDQQRLELEKEFHY 186
DKYRVVY+D QRLELEKEFHY
Sbjct: 2 DKYRVVYTDYQRLELEKEFHY 22
>gi|322790287|gb|EFZ15286.1| hypothetical protein SINV_14557 [Solenopsis invicta]
Length = 204
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 60/69 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFH + Y TI+RKA+LA LGL+ERQ+KIWFQNRRAK+
Sbjct: 1 KTRTKDKYRVVYTDYQRLELEKEFHMNHYTTIKRKADLALQLGLTERQIKIWFQNRRAKQ 60
Query: 61 RKQLKKREE 69
RK KK+ E
Sbjct: 61 RKLAKKQLE 69
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
KTRTKDKYRVVY+D QRLELEKEFH
Sbjct: 1 KTRTKDKYRVVYTDYQRLELEKEFH 25
>gi|260806627|ref|XP_002598185.1| hypothetical protein BRAFLDRAFT_204719 [Branchiostoma floridae]
gi|229283457|gb|EEN54197.1| hypothetical protein BRAFLDRAFT_204719 [Branchiostoma floridae]
Length = 68
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 60/66 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVYSD QRLELEKEF+ ++YITI+RK +LAN LGLSERQVKIWFQNRRAK+
Sbjct: 3 KTRTKDKYRVVYSDHQRLELEKEFYSNKYITIKRKVQLANELGLSERQVKIWFQNRRAKQ 62
Query: 61 RKQLKK 66
RK K+
Sbjct: 63 RKMAKR 68
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
KTRTKDKYRVVYSD QRLELEKEF+
Sbjct: 3 KTRTKDKYRVVYSDHQRLELEKEFY 27
>gi|148229529|ref|NP_001080720.1| caudal type homeobox 4 [Xenopus laevis]
gi|430990|gb|AAA17735.1| Xcad-3 [Xenopus laevis]
Length = 274
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/60 (86%), Positives = 55/60 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KY VVY+D QRLELEKEFHYSRYITIRRK ELA +L LSERQVKIWFQNRRAKE
Sbjct: 147 KTRTKEKYTVVYTDHQRLELEKEFHYSRYITIRRKTELAANLRLSERQVKIWFQNRRAKE 206
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 154 ILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ T KTRTK+KY VVY+D QRLELEKEFHY
Sbjct: 140 VQSTSTGKTRTKEKYTVVYTDHQRLELEKEFHY 172
>gi|578301|emb|CAA26868.1| put. cad fragment [Drosophila melanogaster]
Length = 197
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 59/69 (85%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 57 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 116
Query: 61 RKQLKKREE 69
R KK +
Sbjct: 117 RTSNKKGSD 125
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+Y KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 48 AYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEY 80
>gi|196166497|gb|ACG70807.1| Cdx [Convolutriloba longifissura]
Length = 310
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 58/66 (87%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D+QR ELE EF ++YITIRRK+ELA +GLSERQVKIWFQNRRAKE
Sbjct: 168 KTRTKDKYRVVYTDRQRAELENEFRSAQYITIRRKSELAMQVGLSERQVKIWFQNRRAKE 227
Query: 61 RKQLKK 66
RK +K
Sbjct: 228 RKVSRK 233
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 146 SETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
S+ T++++ + T KTRTKDKYRVVY+D+QR ELE EF
Sbjct: 153 SDHTSSTFRYNPTTGKTRTKDKYRVVYTDRQRAELENEF 191
>gi|380040422|gb|AFD32742.1| Cdx-protein [Symsagittifera roscoffensis]
Length = 299
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 56/62 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D+QR ELE EF ++YITIRRK+ELA +GLSERQVKIWFQNRRAKE
Sbjct: 159 KTRTKDKYRVVYTDRQRAELENEFRSAQYITIRRKSELAMQVGLSERQVKIWFQNRRAKE 218
Query: 61 RK 62
RK
Sbjct: 219 RK 220
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 146 SETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+ +++++ + T KTRTKDKYRVVY+D+QR ELE EF
Sbjct: 144 GDHSSSTFRYNPTTGKTRTKDKYRVVYTDRQRAELENEF 182
>gi|224804|prf||1202246A caudal 38E gene
Length = 74
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/66 (81%), Positives = 58/66 (87%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 4 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 63
Query: 61 RKQLKK 66
R KK
Sbjct: 64 RTSNKK 69
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEF 184
KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 4 KTRTKDKYRVVYTDFQRLELEKEY 27
>gi|56791852|gb|AAW30427.1| Cdx3, partial [Oikopleura dioica]
Length = 125
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+TRTKDKYRVVYSD QRLELEKEF +++YITI+RK EL+ L L+ERQVKIWFQNRRAKE
Sbjct: 34 RTRTKDKYRVVYSDTQRLELEKEFAFNKYITIQRKGELSQQLNLTERQVKIWFQNRRAKE 93
Query: 61 RK 62
RK
Sbjct: 94 RK 95
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
+TRTKDKYRVVYSD QRLELEKEF +
Sbjct: 34 RTRTKDKYRVVYSDTQRLELEKEFAF 59
>gi|32394400|gb|AAN11407.1| parahox class caudal-like protein Srcdx [Symsagittifera
roscoffensis]
Length = 82
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 56/62 (90%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D+QR ELE EF ++YITIRRK+ELA +GLSERQVKIWFQNRRAKE
Sbjct: 4 KTRTKDKYRVVYTDRQRAELENEFRSAQYITIRRKSELAMQVGLSERQVKIWFQNRRAKE 63
Query: 61 RK 62
RK
Sbjct: 64 RK 65
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/24 (83%), Positives = 22/24 (91%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEF 184
KTRTKDKYRVVY+D+QR ELE EF
Sbjct: 4 KTRTKDKYRVVYTDRQRAELENEF 27
>gi|56791848|gb|AAW30425.1| Cdx1 [Oikopleura dioica]
gi|313228777|emb|CBY17928.1| unnamed protein product [Oikopleura dioica]
Length = 260
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 59/66 (89%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+TRT+DKYRVVYS+ QR+ELEKE+++++YITIRRK EL+ L LSERQVKIWFQNRRAKE
Sbjct: 119 RTRTRDKYRVVYSNYQRVELEKEYNFNKYITIRRKVELSKMLDLSERQVKIWFQNRRAKE 178
Query: 61 RKQLKK 66
RK + K
Sbjct: 179 RKMVNK 184
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 25/27 (92%)
Query: 160 RKTRTKDKYRVVYSDQQRLELEKEFHY 186
+TRT+DKYRVVYS+ QR+ELEKE+++
Sbjct: 118 NRTRTRDKYRVVYSNYQRVELEKEYNF 144
>gi|547650|sp|Q02814.1|HMD2_CHICK RecName: Full=Homeobox protein CHOX-CAD2
gi|212524|gb|AAA48999.1| homeobox protein, partial [Gallus gallus]
Length = 60
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
K+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVK WFQNRRAKERK
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAKERK 58
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 165 KDKYRVVYSDQQRLELEKEFH 185
K+KYRVVY+D QRLELEKEFH
Sbjct: 1 KEKYRVVYTDHQRLELEKEFH 21
>gi|313236675|emb|CBY11932.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 59/66 (89%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT++KYRVVY++ QRLELEKE+ ++RYITI +KAELA L LSERQ+KIWFQNRRAKE
Sbjct: 149 KTRTREKYRVVYTNFQRLELEKEYRFNRYITISKKAELAKQLQLSERQIKIWFQNRRAKE 208
Query: 61 RKQLKK 66
RKQ K+
Sbjct: 209 RKQTKR 214
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEF 184
D KTRT++KYRVVY++ QRLELEKE+
Sbjct: 146 DPNKTRTREKYRVVYTNFQRLELEKEY 172
>gi|2995657|gb|AAC39017.1| homeobox protein AmphiCdx, partial [Branchiostoma floridae]
Length = 60
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 54/58 (93%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
KDKYRVVYSD QRLELEKEF+ ++YITI+RK +LAN LGLSERQVKIWFQNRRAK+RK
Sbjct: 1 KDKYRVVYSDHQRLELEKEFYSNKYITIKRKVQLANELGLSERQVKIWFQNRRAKQRK 58
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 165 KDKYRVVYSDQQRLELEKEFH 185
KDKYRVVYSD QRLELEKEF+
Sbjct: 1 KDKYRVVYSDHQRLELEKEFY 21
>gi|14279664|gb|AAK58679.1| caudal protein [Procambarus clarkii]
Length = 77
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 50/52 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIW 52
KTRTKDKYRVVYSD QRLELEKEFHYSRYITIRRK+ELA+ LGLSERQVKIW
Sbjct: 26 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKSELASMLGLSERQVKIW 77
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 5/49 (10%)
Query: 142 SFRSSETTATSYILDIDT----RKTRTKDKYRVVYSDQQRLELEKEFHY 186
S+++ T +Y LD+D KTRTKDKYRVVYSD QRLELEKEFHY
Sbjct: 4 SYQAQPNTDAAY-LDMDGINMKGKTRTKDKYRVVYSDHQRLELEKEFHY 51
>gi|432879692|ref|XP_004073515.1| PREDICTED: homeobox protein CDX-1-like [Oryzias latipes]
Length = 264
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 61/67 (91%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEF Y+RYIT+RRK+EL+ +L LSERQVKIWFQNRRAKE
Sbjct: 156 KTRTKDKYRVVYTDHQRLELEKEFQYNRYITMRRKSELSLALSLSERQVKIWFQNRRAKE 215
Query: 61 RKQLKKR 67
RK +K+
Sbjct: 216 RKMTRKK 222
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 24/26 (92%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEF Y
Sbjct: 156 KTRTKDKYRVVYTDHQRLELEKEFQY 181
>gi|14210222|gb|AAK56940.1|AF374724_1 caudal [Schistocerca gregaria]
Length = 173
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/49 (93%), Positives = 47/49 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQV 49
KTRTKDKYRVVYSD QRLELEKEFHYSRYITIRRKAELA +LGLSERQV
Sbjct: 125 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAANLGLSERQV 173
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 151 TSYILDIDT---RKTRTKDKYRVVYSDQQRLELEKEFHY 186
T D DT KTRTKDKYRVVYSD QRLELEKEFHY
Sbjct: 112 TPGCADTDTLYDGKTRTKDKYRVVYSDHQRLELEKEFHY 150
>gi|307199628|gb|EFN80179.1| Homeobox protein CDX-2 [Harpegnathos saltator]
Length = 68
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%)
Query: 3 RTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
RTKDKYRVVY+D QRLELEKEFH++RYIT+RRKAELA +LGL+ERQV W QN R + R
Sbjct: 1 RTKDKYRVVYTDYQRLELEKEFHFNRYITMRRKAELAKTLGLTERQVSKWCQNERTRRRM 60
Query: 63 QLKKRE 68
L + E
Sbjct: 61 ALLRGE 66
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 23/24 (95%)
Query: 163 RTKDKYRVVYSDQQRLELEKEFHY 186
RTKDKYRVVY+D QRLELEKEFH+
Sbjct: 1 RTKDKYRVVYTDYQRLELEKEFHF 24
>gi|42540584|gb|AAS19195.1| caudal-type homeobox transcription factor 2 [Neovison vison]
Length = 48
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWF 53
DKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWF
Sbjct: 1 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWF 48
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 166 DKYRVVYSDQQRLELEKEFHY 186
DKYRVVY+D QRLELEKEFHY
Sbjct: 1 DKYRVVYTDHQRLELEKEFHY 21
>gi|313221789|emb|CBY38873.1| unnamed protein product [Oikopleura dioica]
Length = 206
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 50/56 (89%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNR 56
+TRTKDKYRVVYSD QRLELEKEF +++YITI+RK EL+ L L+ERQVKIWFQNR
Sbjct: 151 RTRTKDKYRVVYSDTQRLELEKEFAFNKYITIQRKGELSQQLNLTERQVKIWFQNR 206
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
+TRTKDKYRVVYSD QRLELEKEF +
Sbjct: 151 RTRTKDKYRVVYSDTQRLELEKEFAF 176
>gi|444518035|gb|ELV11922.1| FL cytokine receptor [Tupaia chinensis]
Length = 695
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQ 48
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQ
Sbjct: 609 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQ 656
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 609 KTRTKDKYRVVYTDHQRLELEKEFHY 634
>gi|71983120|ref|NP_001021210.1| Protein PAL-1, isoform b [Caenorhabditis elegans]
gi|51591700|emb|CAH19082.1| Protein PAL-1, isoform b [Caenorhabditis elegans]
Length = 268
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 200 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 259
Query: 61 RKQLKK 66
R+ +K
Sbjct: 260 RRDKQK 265
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT DKYR+VYSD QRLELEKEFH
Sbjct: 200 RVRTADKYRMVYSDYQRLELEKEFH 224
>gi|71983115|ref|NP_001021209.1| Protein PAL-1, isoform a [Caenorhabditis elegans]
gi|296439261|sp|P34766.2|PAL1_CAEEL RecName: Full=Homeobox protein pal-1; AltName: Full=Caudal homolog
1; AltName: Full=Homeobox protein ceh-3; AltName:
Full=Posterior alae in males protein 1
gi|14530354|emb|CAA86322.2| Protein PAL-1, isoform a [Caenorhabditis elegans]
Length = 270
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 202 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 261
Query: 61 RKQLKK 66
R+ +K
Sbjct: 262 RRDKQK 267
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT DKYR+VYSD QRLELEKEFH
Sbjct: 202 RVRTADKYRMVYSDYQRLELEKEFH 226
>gi|227722|prf||1709361A pal-1 gene
Length = 273
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 205 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 264
Query: 61 RKQLKK 66
R+ +K
Sbjct: 265 RRDKQK 270
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT DKYR+VYSD QRLELEKEFH
Sbjct: 205 RVRTADKYRMVYSDYQRLELEKEFH 229
>gi|341896016|gb|EGT51951.1| hypothetical protein CAEBREN_10543 [Caenorhabditis brenneri]
Length = 259
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK+ L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 191 RVRTADKYRMVYSDSQRLELEKEFHTSPFITSERKSHLSTMLSLTERQIKIWFQNRRAKD 250
Query: 61 RKQLKK 66
R+ +K
Sbjct: 251 RRDKQK 256
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT DKYR+VYSD QRLELEKEFH
Sbjct: 191 RVRTADKYRMVYSDSQRLELEKEFH 215
>gi|308487724|ref|XP_003106057.1| CRE-PAL-1 protein [Caenorhabditis remanei]
gi|308254631|gb|EFO98583.1| CRE-PAL-1 protein [Caenorhabditis remanei]
Length = 269
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 201 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 260
Query: 61 RKQLKK 66
R+ +K
Sbjct: 261 RRDKQK 266
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT DKYR+VYSD QRLELEKEFH
Sbjct: 201 RVRTADKYRMVYSDYQRLELEKEFH 225
>gi|268574132|ref|XP_002642043.1| C. briggsae CBR-PAL-1 protein [Caenorhabditis briggsae]
gi|296439686|sp|A8XSQ8.1|PAL1_CAEBR RecName: Full=Homeobox protein pal-1; AltName: Full=Posterior alae
in males protein 1
Length = 271
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 203 RVRTADKYRMVYSDYQRLELEKEFHTSAFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 262
Query: 61 RKQLKK 66
R+ +K
Sbjct: 263 RRDKQK 268
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 145 SSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFH 185
SS+T + + + RT DKYR+VYSD QRLELEKEFH
Sbjct: 187 SSDTKSLPTGPGTNNVRVRTADKYRMVYSDYQRLELEKEFH 227
>gi|54111217|dbj|BAD60881.1| Caudal [Tubifex tubifex]
Length = 156
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 51/55 (92%)
Query: 8 YRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
YRVVYS+ Q++ELEKEF Y++YITI+RKAELA S+GLS+ QVKIWFQNRRAKERK
Sbjct: 1 YRVVYSELQKVELEKEFLYNQYITIQRKAELATSIGLSDLQVKIWFQNRRAKERK 55
>gi|6805|emb|CAA44619.1| pal-1 [Caenorhabditis elegans]
Length = 208
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 140 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 199
Query: 61 RKQLKK 66
R+ +K
Sbjct: 200 RRDKQK 205
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT DKYR+VYSD QRLELEKEFH
Sbjct: 140 RVRTADKYRMVYSDYQRLELEKEFH 164
>gi|392894821|ref|NP_001254921.1| Protein PAL-1, isoform c [Caenorhabditis elegans]
gi|260161505|emb|CBG22736.1| Protein PAL-1, isoform c [Caenorhabditis elegans]
Length = 222
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 154 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 213
Query: 61 RKQLKK 66
R+ +K
Sbjct: 214 RRDKQK 219
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT DKYR+VYSD QRLELEKEFH
Sbjct: 154 RVRTADKYRMVYSDYQRLELEKEFH 178
>gi|11967763|emb|CAC19385.1| Caudal protein [Discocelis tigrina]
Length = 241
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 3 RTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
RT DKYR VY++QQ+LELEKEF +Y+ RRK+E+A +L L+ERQVKIWFQNRRAKERK
Sbjct: 160 RTCDKYRQVYTEQQKLELEKEFLTQKYVNARRKSEMARALQLTERQVKIWFQNRRAKERK 219
Query: 63 QLKK 66
K+
Sbjct: 220 LFKR 223
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 163 RTKDKYRVVYSDQQRLELEKEF 184
RT DKYR VY++QQ+LELEKEF
Sbjct: 160 RTCDKYRQVYTEQQKLELEKEF 181
>gi|339241421|ref|XP_003376636.1| homeobox protein CDX-1 [Trichinella spiralis]
gi|316974635|gb|EFV58119.1| homeobox protein CDX-1 [Trichinella spiralis]
Length = 429
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 53/62 (85%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRT++KYR+VYS QRLELEK+F Y+R++T R+ L+ LGL+ERQVKIWFQNRRAKE
Sbjct: 296 KTRTREKYRMVYSSFQRLELEKDFCYNRFVTTERRRILSKLLGLTERQVKIWFQNRRAKE 355
Query: 61 RK 62
+K
Sbjct: 356 KK 357
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRT++KYR+VYS QRLELEK+F Y
Sbjct: 296 KTRTREKYRMVYSSFQRLELEKDFCY 321
>gi|6673|emb|CAA40419.1| ceh-3 [Caenorhabditis elegans]
Length = 71
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 5 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 64
Query: 61 RKQLKK 66
R+ +K
Sbjct: 65 RRDKQK 70
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT DKYR+VYSD QRLELEKEFH
Sbjct: 5 RVRTADKYRMVYSDYQRLELEKEFH 29
>gi|120974084|gb|ABM46634.1| CDX1 [Gorilla gorilla]
Length = 48
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 46/48 (95%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQ 48
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQ
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQ 48
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHY 26
>gi|345448501|gb|AEN92750.1| Cdx [Terebratalia transversa]
Length = 179
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 47/50 (94%)
Query: 18 LELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKR 67
LELEKEF YS+YITI+RKAELAN+L L+ERQVKIWFQNRRAKERKQ KK+
Sbjct: 3 LELEKEFCYSKYITIKRKAELANNLVLAERQVKIWFQNRRAKERKQKKKQ 52
>gi|29164910|gb|AAO65156.1| posterior alae protein [Pristionchus pacificus]
Length = 279
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 51/62 (82%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT+DKYR+VYSD RLELEKEFH +++I RKA+LA L L+E Q+KIWFQNRRAK+
Sbjct: 202 RVRTQDKYRMVYSDYIRLELEKEFHMNQFINADRKADLATKLNLTEAQIKIWFQNRRAKK 261
Query: 61 RK 62
R+
Sbjct: 262 RR 263
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT+DKYR+VYSD RLELEKEFH
Sbjct: 202 RVRTQDKYRMVYSDYIRLELEKEFH 226
>gi|59860650|gb|AAX09762.1| homeodomain transcription factor Cdx [Perionyx excavatus]
Length = 53
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRR 57
KDKYRVVYS+ Q++ELEKEF Y+ YITI+RKAELA+ +GLS+RQVKIWFQNRR
Sbjct: 1 KDKYRVVYSEHQKVELEKEFLYNPYITIQRKAELASIIGLSDRQVKIWFQNRR 53
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 165 KDKYRVVYSDQQRLELEKEFHY 186
KDKYRVVYS+ Q++ELEKEF Y
Sbjct: 1 KDKYRVVYSEHQKVELEKEFLY 22
>gi|313212995|emb|CBY36885.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 50/56 (89%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNR 56
KTRT++KYRVVY++ QRLELEKE+ ++RYITI +KAELA L LSERQ+KIWFQNR
Sbjct: 149 KTRTREKYRVVYTNFQRLELEKEYRFNRYITISKKAELAKQLQLSERQIKIWFQNR 204
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEF 184
D KTRT++KYRVVY++ QRLELEKE+
Sbjct: 146 DPNKTRTREKYRVVYTNFQRLELEKEY 172
>gi|56791850|gb|AAW30426.1| Cdx2, partial [Oikopleura dioica]
Length = 190
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 50/56 (89%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNR 56
KTRT++KYRVVY++ QRLELEKE+ ++RYITI +KAELA L LSERQ+KIWFQNR
Sbjct: 135 KTRTREKYRVVYTNFQRLELEKEYRFNRYITISKKAELAKQLQLSERQIKIWFQNR 190
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEF 184
D KTRT++KYRVVY++ QRLELEKE+
Sbjct: 132 DPNKTRTREKYRVVYTNFQRLELEKEY 158
>gi|297272473|ref|XP_001087920.2| PREDICTED: hypothetical protein LOC696226 [Macaca mulatta]
Length = 1147
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 157 RSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 215
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 46/62 (74%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q LELEKEFH+++Y+ R+ E+A L L+ERQVK+WFQNRR K ++Q +
Sbjct: 935 RLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQH 994
Query: 67 RE 68
RE
Sbjct: 995 RE 996
>gi|324515196|gb|ADY46119.1| Homeobox protein pal-1 [Ascaris suum]
Length = 240
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 53/64 (82%)
Query: 3 RTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
RT +KYR+VY+D QRLELEKEF +++I RK++L++ L L+ERQ+KIWFQNRRAK+R+
Sbjct: 172 RTSEKYRMVYTDYQRLELEKEFRTTQFINSERKSQLSSELQLTERQIKIWFQNRRAKDRR 231
Query: 63 QLKK 66
KK
Sbjct: 232 DSKK 235
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 163 RTKDKYRVVYSDQQRLELEKEF 184
RT +KYR+VY+D QRLELEKEF
Sbjct: 172 RTSEKYRMVYTDYQRLELEKEF 193
>gi|312071216|ref|XP_003138506.1| hox-type homeodomain protein [Loa loa]
gi|307766334|gb|EFO25568.1| hox-type homeodomain protein [Loa loa]
Length = 99
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
K + R YS QQ LELEKEFHY++Y+T RR+ EL +LGL+ERQ+KIWFQNRR K++K+
Sbjct: 25 CKKRGRQTYSRQQTLELEKEFHYNKYLTRRRRIELNRTLGLTERQIKIWFQNRRMKKKKE 84
Query: 64 LKKREE 69
K REE
Sbjct: 85 DKAREE 90
>gi|296209385|ref|XP_002751516.1| PREDICTED: uncharacterized protein LOC100410715 [Callithrix
jacchus]
Length = 716
Score = 83.6 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 613 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 671
>gi|312125843|gb|ADQ27865.1| fushi tarazu [Thermobia domestica]
Length = 369
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH+++Y+T RR+ E+A+SLGLSERQ+KIWFQNRR K +K++K +
Sbjct: 239 RQTYTRFQTLELEKEFHFNKYLTRRRRIEIAHSLGLSERQIKIWFQNRRMKAKKEIKMQP 298
Query: 69 EVVIKDPSKDLF 80
+ V D+
Sbjct: 299 QPVSNGTEDDIL 310
>gi|358341731|dbj|GAA49331.1| homeobox protein Hox-B3 [Clonorchis sinensis]
Length = 531
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
T T + R Y++QQ +ELEKEFHYS Y+ R+ ELA LGLSERQ+KIWFQNRR K++
Sbjct: 325 TSTSKRPRSAYTNQQLVELEKEFHYSNYLVQPRRVELAKQLGLSERQIKIWFQNRRMKQK 384
Query: 62 KQLKKRE 68
K+++ E
Sbjct: 385 KEVRDAE 391
>gi|390464421|ref|XP_002806951.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100411183 [Callithrix jacchus]
Length = 954
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 157 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 215
>gi|297264383|ref|XP_001095080.2| PREDICTED: hypothetical protein LOC701064 [Macaca mulatta]
Length = 3029
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 1274 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 1332
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 44/61 (72%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K
Sbjct: 2127 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKA 2186
Query: 67 R 67
+
Sbjct: 2187 K 2187
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R +S +Q ELEKEFH+++Y+T R+ E+AN L L++ QVKIWFQNRR K++K ++RE
Sbjct: 2934 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKK--RERE 2991
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R YS Q LELEKEF ++ Y+T +R+ E++++L L+ERQVKIWFQNRR K +K+ K
Sbjct: 542 RQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNK 599
>gi|402587335|gb|EJW81270.1| hypothetical protein WUBG_07821, partial [Wuchereria bancrofti]
Length = 218
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
K + R YS QQ LELEKEFHY++Y+T RR+ EL +LGL+ERQ+KIWFQNRR K++K+
Sbjct: 144 CKKRGRQTYSRQQTLELEKEFHYNKYLTRRRRIELNRTLGLTERQIKIWFQNRRMKKKKE 203
Query: 64 LKKREE 69
K R+E
Sbjct: 204 DKARDE 209
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 80/186 (43%), Gaps = 29/186 (15%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
K R Y Q LE +F S Y++ +++ EL LS+RQ+KIWFQNRR K +K+ +
Sbjct: 4 KGRQTYQRYQTSVLESKFQQSSYVSKKQREELRLQTNLSDRQIKIWFQNRRMKAKKEKNR 63
Query: 67 REE------VVIKDPSKDLFLSNKVMYTYLVFQVKIWFQNRRAKERKQLKKREEVVIKDP 120
EE ++ +P K L + + V V +E V K
Sbjct: 64 CEEQNEHSALLPANPPKQLVVDSAAAAAAAVAAVTT----------------DERVDK-- 105
Query: 121 SKDLFLSNKVMIRKISVSPPFSFRSSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLEL 180
K ++ M ++ P+ + A+ I K R R YS QQ LEL
Sbjct: 106 -KVASGASWCMPTMPTMPQPWPNQVPPHPASYVPYPIYNCKKRG----RQTYSRQQTLEL 160
Query: 181 EKEFHY 186
EKEFHY
Sbjct: 161 EKEFHY 166
>gi|444713454|gb|ELW54353.1| Homeobox protein Hox-A3 [Tupaia chinensis]
Length = 620
Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 20 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 78
>gi|15004531|gb|AAK77136.1|AF363235_1 homeodomain transcription factor Cdx [Phascolion strombus]
Length = 45
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/45 (88%), Positives = 42/45 (93%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKI 51
KYRVVY+D QRLELEKEFHYSRYITIRRKAELA +L LSERQVKI
Sbjct: 1 KYRVVYTDHQRLELEKEFHYSRYITIRRKAELAQNLSLSERQVKI 45
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 19/20 (95%)
Query: 167 KYRVVYSDQQRLELEKEFHY 186
KYRVVY+D QRLELEKEFHY
Sbjct: 1 KYRVVYTDHQRLELEKEFHY 20
>gi|328778410|ref|XP_001120045.2| PREDICTED: hypothetical protein LOC724252 [Apis mellifera]
Length = 565
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 330 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 388
>gi|225581120|gb|ACN94691.1| GA15291 [Drosophila miranda]
Length = 607
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 374 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 432
>gi|198453478|ref|XP_001359215.2| Dfd [Drosophila pseudoobscura pseudoobscura]
gi|198132373|gb|EAL28360.2| Dfd [Drosophila pseudoobscura pseudoobscura]
Length = 604
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 374 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 432
>gi|195446494|ref|XP_002070806.1| GK12253 [Drosophila willistoni]
gi|194166891|gb|EDW81792.1| GK12253 [Drosophila willistoni]
Length = 599
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 377 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 435
>gi|195152073|ref|XP_002016961.1| GL22041 [Drosophila persimilis]
gi|194112018|gb|EDW34061.1| GL22041 [Drosophila persimilis]
Length = 602
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 374 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 432
>gi|195568821|ref|XP_002102412.1| GD19895 [Drosophila simulans]
gi|194198339|gb|EDX11915.1| GD19895 [Drosophila simulans]
Length = 582
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 368 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
>gi|194742024|ref|XP_001953507.1| GF17792 [Drosophila ananassae]
gi|190626544|gb|EDV42068.1| GF17792 [Drosophila ananassae]
Length = 582
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 369 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 427
>gi|359323087|ref|XP_849475.2| PREDICTED: uncharacterized protein LOC607625 [Canis lupus familiaris]
Length = 1280
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K K
Sbjct: 1215 RSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKM 1274
Query: 67 REE 69
+ +
Sbjct: 1275 KSK 1277
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R YS Q LELEKEF ++ Y+T +R+ E++++LGL+ERQVKIWFQNRR K +K+ K
Sbjct: 543 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 600
>gi|219870099|gb|ACL50280.1| homeobox protein Hoxb-4 [Xenopus laevis]
Length = 230
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 143 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLPN 202
Query: 69 EVVIKDPSKDLFLSN 83
+ +PS +L ++
Sbjct: 203 TKIKSNPSVNLQIAG 217
>gi|195498922|ref|XP_002096730.1| GE24883 [Drosophila yakuba]
gi|194182831|gb|EDW96442.1| GE24883 [Drosophila yakuba]
Length = 588
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 373 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 431
>gi|148225917|ref|NP_001089733.1| homeobox protein Hox-B4 [Xenopus laevis]
gi|123238|sp|P09070.1|HXB4_XENLA RecName: Full=Homeobox protein Hox-B4; AltName: Full=Xhox-1A
gi|214265|gb|AAA49756.1| homeobox protein 1A [Xenopus laevis]
gi|76780348|gb|AAI06430.1| MGC131119 protein [Xenopus laevis]
Length = 232
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 145 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLPN 204
Query: 69 EVVIKDPSKDLFLSN 83
+ +PS +L ++
Sbjct: 205 TKIKSNPSVNLQIAG 219
>gi|7837|emb|CAA28782.1| unnamed protein product [Drosophila melanogaster]
Length = 590
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 368 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
>gi|17137270|ref|NP_477201.1| deformed [Drosophila melanogaster]
gi|68067431|sp|P07548.2|DFD_DROME RecName: Full=Homeotic protein deformed
gi|4389426|gb|AAD19796.1| homeodomain protein [Drosophila melanogaster]
gi|23170614|gb|AAF54083.2| deformed [Drosophila melanogaster]
Length = 586
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 368 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
>gi|449277039|gb|EMC85346.1| Homeobox protein Hox-B4, partial [Columba livia]
Length = 225
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 154 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 210
>gi|172355404|ref|NP_001116487.1| homeobox B4 [Xenopus (Silurana) tropicalis]
gi|171846845|gb|AAI61550.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 234
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 147 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLPN 206
Query: 69 EVVIKDPSKDLFLSNK 84
+ +PS +L ++
Sbjct: 207 TKIRSNPSVNLQIAGG 222
>gi|59808843|gb|AAH90114.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 233
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 146 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLPN 205
Query: 69 EVVIKDPSKDLFLSNK 84
+ +PS +L ++
Sbjct: 206 TKIRSNPSVNLQIAGG 221
>gi|45384234|ref|NP_990624.1| homeobox protein Hox-B4 [Gallus gallus]
gi|123264|sp|P14840.1|HXB4_CHICK RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-Z; Short=Chox-Z
gi|63505|emb|CAA35614.1| unnamed protein product [Gallus gallus]
Length = 245
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 154 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 210
>gi|241756306|ref|XP_002406404.1| fushi tarazu, putative [Ixodes scapularis]
gi|215506141|gb|EEC15635.1| fushi tarazu, putative [Ixodes scapularis]
Length = 110
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+ K +
Sbjct: 19 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKAKKENKLQG 78
Query: 69 EVVIKDPSKDL 79
+++ P +L
Sbjct: 79 GLLVPKPVDEL 89
>gi|195038421|ref|XP_001990656.1| GH19479 [Drosophila grimshawi]
gi|193894852|gb|EDV93718.1| GH19479 [Drosophila grimshawi]
Length = 599
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 364 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 422
>gi|123319|sp|P09080.3|HMB1_TRIGR RecName: Full=Homeobox protein HB1; AltName: Full=TGHBOX1
gi|829232|emb|CAA32660.1| TgHbox1 protein [Tripneustes gratilla]
Length = 307
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 51/65 (78%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y+ Q LELEKEFH++RY+T RR+ EL++ LGL+ERQ+KIWFQNRR K +K+ K
Sbjct: 191 RCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKESKN 250
Query: 67 REEVV 71
+EE V
Sbjct: 251 KEEGV 255
>gi|194899141|ref|XP_001979121.1| GG13676 [Drosophila erecta]
gi|190650824|gb|EDV48079.1| GG13676 [Drosophila erecta]
Length = 579
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 368 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
>gi|195344069|ref|XP_002038613.1| GM10914 [Drosophila sechellia]
gi|194133634|gb|EDW55150.1| GM10914 [Drosophila sechellia]
Length = 582
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 368 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
>gi|217035826|gb|ACJ74383.1| Hox4 [Branchiostoma lanceolatum]
Length = 278
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SLGL+ERQ+KIWFQNRR K +K
Sbjct: 178 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 231
>gi|397911062|gb|AFO68807.1| homeodomain-containing protein Hox4, partial [Branchiostoma
lanceolatum]
Length = 262
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SLGL+ERQ+KIWFQNRR K +K
Sbjct: 168 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 221
>gi|255755649|dbj|BAH96550.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 248
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQL 64
K + R Y+ Q LELEKEFHY+RY+T RR+ EL++ LGL+ERQ+KIWFQNRR K +K+
Sbjct: 149 KKRCRQTYTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKES 208
Query: 65 KKREEVVIKD 74
KK + + D
Sbjct: 209 KKDDSEITSD 218
>gi|390351575|ref|XP_003727686.1| PREDICTED: uncharacterized protein LOC574804 [Strongylocentrotus
purpuratus]
Length = 270
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ QQ LELEKEFH+SRY+T RR+ E+A SLGLSERQ+KIWFQNRR K +++
Sbjct: 193 RQTYTRQQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWKRE 247
>gi|47216997|emb|CAG01625.1| unnamed protein product [Tetraodon nigroviridis]
Length = 568
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 82 RSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 140
Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 35 KAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ E+AN L LSERQ+KIWFQNRR K +K K
Sbjct: 336 RVEMANLLNLSERQIKIWFQNRRMKYKKDQK 366
>gi|220898192|gb|ACL81447.1| HoxB4 [Latimeria menadoensis]
Length = 247
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 154 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 210
>gi|225507|prf||1305251A Deformed gene
Length = 590
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 368 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
>gi|327275883|ref|XP_003222701.1| PREDICTED: homeobox protein Hox-B4-like [Anolis carolinensis]
Length = 251
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 153 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 209
>gi|28629647|gb|AAO43029.1| HoxB4 [Latimeria menadoensis]
Length = 244
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|359754097|gb|AEV59519.1| HOXB4 [Macropus eugenii]
Length = 240
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|254692758|dbj|BAH23874.2| transcription factor Hox5 [Balanoglossus misakiensis]
Length = 241
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK-KR 67
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGLSERQ+KIWFQNRR K +K+ K
Sbjct: 155 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEHNVKS 214
Query: 68 EEVVIKDPSKDLFLSNKV 85
+++DP S +V
Sbjct: 215 ISQLMEDPKNGTIDSTRV 232
>gi|195110421|ref|XP_001999778.1| GI24717 [Drosophila mojavensis]
gi|193916372|gb|EDW15239.1| GI24717 [Drosophila mojavensis]
Length = 592
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 359 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 417
>gi|395532698|ref|XP_003768405.1| PREDICTED: homeobox protein Hox-B4 [Sarcophilus harrisii]
Length = 240
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|5002502|dbj|BAA78622.1| AmphiHox4 [Branchiostoma floridae]
Length = 275
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SLGL+ERQ+KIWFQNRR K +K
Sbjct: 175 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 228
>gi|260835439|ref|XP_002612716.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
gi|229298095|gb|EEN68725.1| hypothetical protein BRAFLDRAFT_129968 [Branchiostoma floridae]
Length = 275
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SLGL+ERQ+KIWFQNRR K +K
Sbjct: 175 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 228
>gi|126308355|ref|XP_001372992.1| PREDICTED: homeobox protein Hox-B4-like [Monodelphis domestica]
Length = 240
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|26984638|emb|CAD59115.1| SI:dZ254O17.5 (homeo box protein B4a) [Danio rerio]
Length = 244
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 153 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 209
>gi|224813652|gb|ACN65055.1| homeo box B4a [Megalobrama amblycephala]
Length = 246
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 155 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 211
>gi|18858835|ref|NP_571193.1| homeobox protein Hox-B4a [Danio rerio]
gi|60392407|sp|P22574.3|HXB4A_DANRE RecName: Full=Homeobox protein Hox-B4a; Short=Hox-B4; AltName:
Full=Homeobox protein Zf-13
gi|4322072|gb|AAD15945.1| homeobox protein [Danio rerio]
gi|190337053|gb|AAI62840.1| Homeo box B4a [Danio rerio]
gi|190337059|gb|AAI62844.1| Homeo box B4a [Danio rerio]
Length = 246
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 155 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 211
>gi|358254519|dbj|GAA55671.1| homeobox protein Hox-B4a [Clonorchis sinensis]
Length = 763
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/62 (59%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
T TK + R Y+ QQ LELEKEFHY++Y+T +R+ E+A++L LSERQ+KIWFQNRR K +
Sbjct: 458 TDTK-RTRTAYTRQQILELEKEFHYNKYLTRKRRLEIAHTLTLSERQIKIWFQNRRMKWK 516
Query: 62 KQ 63
K+
Sbjct: 517 KE 518
>gi|385654481|gb|AFI61982.1| Hox-B4a [Anguilla japonica]
Length = 243
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|297262540|ref|XP_001108363.2| PREDICTED: hypothetical protein LOC704526 isoform 3 [Macaca
mulatta]
Length = 948
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 858 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 912
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R YS Q LELEKEF ++ Y+T +R+ E++++LGL+ERQVKIWFQNRR K +K+ K
Sbjct: 187 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 244
>gi|332692490|gb|AEE90170.1| Homeobox B4a [Anguilla anguilla]
Length = 243
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|156387514|ref|XP_001634248.1| predicted protein [Nematostella vectensis]
gi|156221329|gb|EDO42185.1| predicted protein [Nematostella vectensis]
Length = 231
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 55/76 (72%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+YR Y+++Q LELEKEFHY++Y+ R+ ELAN++ L+ERQVK+WFQNRR K +K K+
Sbjct: 101 RYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMKLKKDEKQ 160
Query: 67 REEVVIKDPSKDLFLS 82
+E+ P D+ S
Sbjct: 161 KEDGPSAFPDYDVMKS 176
>gi|327263834|ref|XP_003216722.1| PREDICTED: homeobox protein Hox-C4-like [Anolis carolinensis]
Length = 283
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 181 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 234
>gi|259013406|ref|NP_001158410.1| homeobox 5 [Saccoglossus kowalevskii]
gi|116574502|gb|ABK00019.1| hox 5 [Saccoglossus kowalevskii]
Length = 243
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGLSERQ+KIWFQNRR K +K+ +
Sbjct: 155 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEHNVKS 214
Query: 69 EVVIKDP 75
I +P
Sbjct: 215 ISQIMNP 221
>gi|195038415|ref|XP_001990655.1| GH19477 [Drosophila grimshawi]
gi|193894851|gb|EDV93717.1| GH19477 [Drosophila grimshawi]
Length = 576
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 47/59 (79%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 335 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHK 393
>gi|119364594|sp|O13074.2|HXB4A_FUGRU RecName: Full=Homeobox protein Hox-B4a; AltName: Full=FrHOXB-4
gi|94482798|gb|ABF22416.1| homeobox protein HoxB4a [Takifugu rubripes]
Length = 288
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 164 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 220
>gi|42495113|gb|AAS17755.1| homeodomain transcription factor fushi tarazu, partial [Thermobia
domestica]
Length = 126
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%)
Query: 16 QRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKREEVVIKDP 75
Q LELEKEFH+++Y+T RR+ E+A+SLGLSERQ+KIWFQNRR K +K++K + + V
Sbjct: 3 QTLELEKEFHFNKYLTRRRRIEIAHSLGLSERQIKIWFQNRRMKAKKEIKMQPQPVSNGT 62
Query: 76 SKDLF 80
D+
Sbjct: 63 EDDIL 67
>gi|32263873|gb|AAG37795.2|AF020962_1 Hox type homeodomain protein [Nematostella vectensis]
Length = 178
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 55/76 (72%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+YR Y+++Q LELEKEFHY++Y+ R+ ELAN++ L+ERQVK+WFQNRR K +K K+
Sbjct: 48 RYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMKLKKDEKQ 107
Query: 67 REEVVIKDPSKDLFLS 82
+E+ P D+ S
Sbjct: 108 KEDGPSAFPDYDVMKS 123
>gi|88604718|gb|ABD46730.1| homeobox protein fushi tarazu [Endeis spinosa]
Length = 302
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGLSERQ+KIWFQNRR K +K+ K
Sbjct: 212 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKAKKENK 268
>gi|32386|emb|CAA30376.1| unnamed protein product [Homo sapiens]
gi|11993919|gb|AAG42145.1| HOXC4 [Homo sapiens]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RAAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|355786156|gb|EHH66339.1| Homeobox protein Hox-3E [Macaca fascicularis]
Length = 206
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 102 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 155
>gi|395835051|ref|XP_003790498.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Otolemur garnettii]
gi|395835053|ref|XP_003790499.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Otolemur garnettii]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|57106663|ref|XP_543624.1| PREDICTED: homeobox protein Hox-C4 isoform 4 [Canis lupus
familiaris]
gi|73996160|ref|XP_856443.1| PREDICTED: homeobox protein Hox-C4 isoform 8 [Canis lupus
familiaris]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|255755645|dbj|BAH96548.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK-KR 67
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGLSERQ+KIWFQNRR K +K+ K
Sbjct: 157 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEHNVKS 216
Query: 68 EEVVIKDPSKDLFLSNKV 85
+++DP + +V
Sbjct: 217 ISQLMEDPKNGTLDATRV 234
>gi|187956227|gb|AAI50665.1| Homeo box C4 [Mus musculus]
gi|219841914|gb|AAI44779.1| Hoxc4 protein [Mus musculus]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|154800435|ref|NP_038581.2| homeobox protein Hox-C4 [Mus musculus]
gi|585281|sp|Q08624.1|HXC4_MOUSE RecName: Full=Homeobox protein Hox-C4; AltName: Full=Homeobox
protein Hox-3.5
gi|385750|gb|AAB27153.1| homeobox [Mus sp.]
gi|416420|dbj|BAA01947.1| Hox 3.5 [Mus musculus]
gi|448269|prf||1916397A Hox3.5 gene
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|253828365|gb|ACT36588.1| Anthox7, partial [Nematostella vectensis]
Length = 176
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 55/76 (72%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+YR Y+++Q LELEKEFHY++Y+ R+ ELAN++ L+ERQVK+WFQNRR K +K K+
Sbjct: 46 RYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKVWFQNRRMKLKKDEKQ 105
Query: 67 REEVVIKDPSKDLFLS 82
+E+ P D+ S
Sbjct: 106 KEDGPSAFPDYDVMKS 121
>gi|158081778|ref|NP_001103354.1| homeobox protein Hox-C4 [Rattus norvegicus]
gi|149031888|gb|EDL86800.1| homeo box C4 (mapped) [Rattus norvegicus]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|156139065|ref|NP_001095843.1| homeobox protein Hox-C4 [Bos taurus]
gi|301776118|ref|XP_002923477.1| PREDICTED: homeobox protein Hox-C4-like [Ailuropoda melanoleuca]
gi|311255481|ref|XP_001925163.2| PREDICTED: homeobox protein Hox-C4-like [Sus scrofa]
gi|133777439|gb|AAI14691.1| HOXC4 protein [Bos taurus]
gi|281342179|gb|EFB17763.1| hypothetical protein PANDA_012616 [Ailuropoda melanoleuca]
gi|296487922|tpg|DAA30035.1| TPA: homeobox C4 [Bos taurus]
gi|431921603|gb|ELK18955.1| Homeobox protein Hox-C4 [Pteropus alecto]
gi|440900711|gb|ELR51789.1| Homeobox protein Hox-C4 [Bos grunniens mutus]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|432112556|gb|ELK35272.1| Homeobox protein Hox-C4 [Myotis davidii]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|410255860|gb|JAA15897.1| homeobox C4 [Pan troglodytes]
gi|410348020|gb|JAA40759.1| homeobox C4 [Pan troglodytes]
gi|410348022|gb|JAA40760.1| homeobox C4 [Pan troglodytes]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|325260876|gb|ADZ04666.1| homeobox C4 [Notophthalmus viridescens]
Length = 271
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 168 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 221
>gi|148671994|gb|EDL03941.1| homeobox C4 [Mus musculus]
Length = 262
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 158 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 211
>gi|449266120|gb|EMC77230.1| Homeobox protein Hox-C4, partial [Columba livia]
Length = 224
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 163 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 216
>gi|30047742|gb|AAH50442.1| Homeobox C4 [Homo sapiens]
gi|167773153|gb|ABZ92011.1| homeobox C6 [synthetic construct]
gi|312153060|gb|ADQ33042.1| homeobox C4 [synthetic construct]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|24497538|ref|NP_055435.2| homeobox protein Hox-C4 [Homo sapiens]
gi|24497540|ref|NP_705897.1| homeobox protein Hox-C4 [Homo sapiens]
gi|302565652|ref|NP_001181685.1| homeobox protein Hox-C4 [Macaca mulatta]
gi|296211864|ref|XP_002752589.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Callithrix jacchus]
gi|296211866|ref|XP_002752590.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Callithrix jacchus]
gi|332839196|ref|XP_003313692.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Pan troglodytes]
gi|332839198|ref|XP_003313693.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Pan troglodytes]
gi|397521945|ref|XP_003831043.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Pan paniscus]
gi|397521947|ref|XP_003831044.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Pan paniscus]
gi|402886203|ref|XP_003906527.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Papio anubis]
gi|402886205|ref|XP_003906528.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Papio anubis]
gi|403296837|ref|XP_003939301.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403296839|ref|XP_003939302.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Saimiri boliviensis
boliviensis]
gi|426372806|ref|XP_004053307.1| PREDICTED: homeobox protein Hox-C4 [Gorilla gorilla gorilla]
gi|281185468|sp|P09017.2|HXC4_HUMAN RecName: Full=Homeobox protein Hox-C4; AltName: Full=Homeobox
protein CP19; AltName: Full=Homeobox protein Hox-3E
gi|119617150|gb|EAW96744.1| hCG2044075 [Homo sapiens]
gi|119617155|gb|EAW96749.1| hCG2043420 [Homo sapiens]
gi|208968509|dbj|BAG74093.1| homeobox C4 [synthetic construct]
gi|355564298|gb|EHH20798.1| Homeobox protein Hox-3E [Macaca mulatta]
gi|410226588|gb|JAA10513.1| homeobox C4 [Pan troglodytes]
Length = 264
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|123320|sp|P10178.1|HMB3_TRIGR RecName: Full=Homeobox protein HB3
gi|1335679|emb|CAA31544.1| unnamed protein product [Tripneustes gratilla]
Length = 108
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ QQ LELEKEFH+SRY+T RR+ E+A SLGLSERQ+KIWFQNRR K +++
Sbjct: 31 RQTYTRQQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWKRE 85
>gi|348581047|ref|XP_003476289.1| PREDICTED: homeobox protein Hox-C4-like [Cavia porcellus]
gi|351706132|gb|EHB09051.1| Homeobox protein Hox-C4 [Heterocephalus glaber]
Length = 264
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|332207732|ref|XP_003252950.1| PREDICTED: homeobox protein Hox-C4 isoform 1 [Nomascus leucogenys]
gi|332207734|ref|XP_003252951.1| PREDICTED: homeobox protein Hox-C4 isoform 2 [Nomascus leucogenys]
Length = 264
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|312384143|gb|EFR28942.1| hypothetical protein AND_02492 [Anopheles darlingi]
Length = 481
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 46/59 (77%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
T + R YS Q LELEKEFH++RY+T RR+ E+ANSL L+ERQ+KIWFQNRR K +K
Sbjct: 215 TAKRTRQSYSRHQTLELEKEFHFNRYLTRRRRIEIANSLNLTERQIKIWFQNRRMKAKK 273
>gi|396184|emb|CAA48784.1| Hox-3.5 [Mus musculus]
Length = 264
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|348517819|ref|XP_003446430.1| PREDICTED: homeobox protein Hox-B4a-like [Oreochromis niloticus]
Length = 258
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 171 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 227
>gi|332692500|gb|AEE90179.1| Homeobox B4b [Anguilla anguilla]
Length = 246
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 154 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 210
>gi|395826614|ref|XP_003786512.1| PREDICTED: homeobox protein Hox-B4 [Otolemur garnettii]
Length = 251
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|385654493|gb|AFI61992.1| Hox-B4b [Anguilla japonica]
Length = 246
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 154 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 210
>gi|2961628|gb|AAC05784.1| homeotic protein [Pristionchus pacificus]
Length = 211
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 8/95 (8%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH+++Y+T +R+ E+++SL LSERQVKIWFQNRR K +K+ K +
Sbjct: 120 RTAYTRNQVLELEKEFHFNKYLTRKRRIEISHSLMLSERQVKIWFQNRRMKHKKEHKDKP 179
Query: 69 EV--VIKDPSKDL-FLSNKVMYTYLVFQVKIWFQN 100
+V ++ PS L FL+N + FQ + N
Sbjct: 180 QVPQMMPFPSGQLPFLNN-----FTTFQRNLLLSN 209
>gi|148229589|ref|NP_001027781.2| hox4 protein [Ciona intestinalis]
gi|70569912|dbj|BAE06501.1| transcription factor protein [Ciona intestinalis]
Length = 335
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 49/73 (67%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY+RY+T RR+ E+A+ L LSERQVKIWFQNRR K +K K
Sbjct: 113 RTAYTRHQVLELEKEFHYNRYLTRRRRIEIAHGLCLSERQVKIWFQNRRMKWKKDHKLPN 172
Query: 69 EVVIKDPSKDLFL 81
V P+ L +
Sbjct: 173 TKVRNPPTSSLPI 185
>gi|837347|gb|AAB33590.1| Hoxb-4 homeodomain protein [Takifugu rubripes=Japanese puffer fish,
Peptide, 251 aa]
gi|2130556|gb|AAC60205.1| homeobox protein HOXB-4 [Takifugu rubripes]
Length = 251
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 167 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 223
>gi|397911064|gb|AFO68808.1| homeodomain-containing protein Hox4, partial [Branchiostoma
lanceolatum]
Length = 118
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SLGL+ERQ+KIWFQNRR K +K
Sbjct: 18 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 71
>gi|444517709|gb|ELV11727.1| Homeobox protein Hox-B4 [Tupaia chinensis]
Length = 207
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 122 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 178
>gi|158296358|ref|XP_001688962.1| AGAP004646-PA [Anopheles gambiae str. PEST]
gi|157015341|gb|EDO63636.1| AGAP004646-PA [Anopheles gambiae str. PEST]
Length = 577
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 350 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 408
>gi|16508129|gb|AAL17914.1| homeobox protein hox4x [Petromyzon marinus]
Length = 381
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
+ R Y+ Q LELEKEFH++RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +K
Sbjct: 295 NGARTAYTRHQALELEKEFHFNRYLTRRRRVEVANALCLSERQIKIWFQNRRMKWKK 351
>gi|432871988|ref|XP_004072061.1| PREDICTED: homeobox protein Hox-B4a-like, partial [Oryzias latipes]
Length = 251
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 167 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 223
>gi|359754106|gb|AEV59527.1| HOXC4 [Macropus eugenii]
Length = 263
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|291389288|ref|XP_002711078.1| PREDICTED: homeobox C4 [Oryctolagus cuniculus]
Length = 264
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
>gi|444513901|gb|ELV10486.1| Homeobox protein Hox-C4 [Tupaia chinensis]
Length = 270
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 219
>gi|14916600|sp|Q9PWD2.1|HXA4_MORSA RecName: Full=Homeobox protein Hox-A4
gi|5669605|gb|AAD46399.1|AF089743_5 homeodomain protein Hox-A4 [Morone saxatilis]
Length = 248
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K+ K
Sbjct: 153 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHK 209
>gi|74267537|dbj|BAE44267.1| hoxB4a [Oryzias latipes]
gi|83016947|dbj|BAE53474.1| hoxB4a [Oryzias latipes]
Length = 253
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 167 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 223
>gi|38016605|gb|AAR07636.1| transcription factor Hox5 [Ptychodera flava]
Length = 238
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK-KR 67
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGLSERQ+KIWFQNRR K +K+ K
Sbjct: 155 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLSERQIKIWFQNRRMKWKKEHNVKS 214
Query: 68 EEVVIKDP 75
+++DP
Sbjct: 215 ISQLMEDP 222
>gi|220898205|gb|ACL81459.1| HoxC4 [Latimeria menadoensis]
Length = 260
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 158 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 211
>gi|426226610|ref|XP_004007433.1| PREDICTED: homeobox protein Hox-C4 [Ovis aries]
Length = 214
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 110 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 163
>gi|301614398|ref|XP_002936684.1| PREDICTED: homeobox protein Hox-C4-like [Xenopus (Silurana)
tropicalis]
Length = 297
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 197 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 250
>gi|15425738|dbj|BAB64346.1| homeotic protein [Daphnia magna]
gi|109944917|dbj|BAE96985.1| Antennapedia [Daphnia magna]
gi|109944921|dbj|BAE96987.1| Antennapedia [Daphnia magna]
gi|109944923|dbj|BAE96988.1| Antennapedia [Daphnia magna]
gi|109944925|dbj|BAE96989.1| Antennapedia [Daphnia magna]
gi|109944928|dbj|BAE96991.1| Antennapedia [Daphnia magna]
gi|109944931|dbj|BAE96993.1| Antennapedia [Daphnia magna]
Length = 627
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQL 64
+ + R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+
Sbjct: 546 RKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 605
Query: 65 KKR 67
K +
Sbjct: 606 KAK 608
>gi|410901717|ref|XP_003964342.1| PREDICTED: homeobox protein Hox-B4a-like [Takifugu rubripes]
Length = 297
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 197 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 253
>gi|321475842|gb|EFX86804.1| putative homeotic Antennapedia protein [Daphnia pulex]
Length = 657
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 49/63 (77%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQL 64
+ + R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+
Sbjct: 576 RKRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 635
Query: 65 KKR 67
K +
Sbjct: 636 KAK 638
>gi|254692762|dbj|BAH23876.2| transcription factor Hox7 [Balanoglossus misakiensis]
Length = 246
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQL 64
K + R Y+ Q LELEKEFHY+RY+T RR+ EL++ LGL+ERQ+KIWFQNRR K +K+
Sbjct: 148 KKRCRQTYTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKES 207
Query: 65 KKREEVVIKD 74
KK + D
Sbjct: 208 KKDDSETGSD 217
>gi|154183829|gb|ABS70769.1| Hoxa4a [Haplochromis burtoni]
Length = 247
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K+ K
Sbjct: 151 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHK 207
>gi|332024366|gb|EGI64564.1| Homeotic protein proboscipedia [Acromyrmex echinatior]
Length = 709
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q
Sbjct: 37 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 96
Query: 67 REEVVIKDPS 76
+E+ KD S
Sbjct: 97 KEDGDEKDGS 106
>gi|59939347|gb|AAX12439.1| Dbuz\lab-PA [Drosophila buzzatii]
Length = 659
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
+ T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++
Sbjct: 517 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 576
Query: 62 KQLKK 66
K++K+
Sbjct: 577 KRVKE 581
>gi|74267507|dbj|BAE44252.1| hoxA4a [Oryzias latipes]
gi|83016930|dbj|BAE53462.1| hoxA4a [Oryzias latipes]
Length = 249
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K+ K
Sbjct: 153 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHK 209
>gi|390463618|ref|XP_002748584.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B4 [Callithrix
jacchus]
Length = 253
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|195389737|ref|XP_002053531.1| lab [Drosophila virilis]
gi|194151617|gb|EDW67051.1| lab [Drosophila virilis]
Length = 643
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
+ T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++
Sbjct: 506 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 565
Query: 62 KQLKK 66
K++K+
Sbjct: 566 KRVKE 570
>gi|195107210|ref|XP_001998208.1| GI23760 [Drosophila mojavensis]
gi|193914802|gb|EDW13669.1| GI23760 [Drosophila mojavensis]
Length = 651
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
+ T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++
Sbjct: 508 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 567
Query: 62 KQLKK 66
K++K+
Sbjct: 568 KRVKE 572
>gi|195038455|ref|XP_001990673.1| GH19490 [Drosophila grimshawi]
gi|193894869|gb|EDV93735.1| GH19490 [Drosophila grimshawi]
Length = 651
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
+ T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++
Sbjct: 515 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 574
Query: 62 KQLKK 66
K++K+
Sbjct: 575 KRVKE 579
>gi|37693039|gb|AAQ98855.1| homeodomain transcription factor labial [Drosophila buzzatii]
Length = 655
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
+ T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++
Sbjct: 514 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQK 573
Query: 62 KQLKK 66
K++K+
Sbjct: 574 KRVKE 578
>gi|410911236|ref|XP_003969096.1| PREDICTED: homeobox protein Hox-A4a-like [Takifugu rubripes]
Length = 286
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K+ K
Sbjct: 184 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHK 240
>gi|402899487|ref|XP_003912727.1| PREDICTED: homeobox protein Hox-B4 [Papio anubis]
Length = 251
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|345322207|ref|XP_003430544.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B5-like
[Ornithorhynchus anatinus]
Length = 281
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 197 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 253
>gi|301762930|ref|XP_002916893.1| PREDICTED: homeobox protein Hox-B4-like [Ailuropoda melanoleuca]
Length = 183
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 105 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 161
>gi|7527478|gb|AAF63162.1|AF237818_1 fushi tarazu-like protein [Archegozetes longisetosus]
Length = 278
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A+SLGL+ERQ+KIWFQNRR K +K+ K
Sbjct: 200 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKAKKENK 256
>gi|520612|emb|CAA84516.1| Hox-4 homeodomain protein [Branchiostoma floridae]
gi|745776|prf||2016458C Hox-4 gene
Length = 105
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SLGL+ERQ+KIWFQNRR K +K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 66
>gi|403280029|ref|XP_003931541.1| PREDICTED: homeobox protein Hox-B4 [Saimiri boliviensis
boliviensis]
Length = 203
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 124 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 180
>gi|119370773|sp|Q1KL13.1|HXA4A_FUGRU RecName: Full=Homeobox protein Hox-A4a
gi|94482761|gb|ABF22381.1| homeobox protein HoxA4a [Takifugu rubripes]
Length = 255
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K+ K
Sbjct: 153 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHK 209
>gi|281344380|gb|EFB19964.1| hypothetical protein PANDA_005010 [Ailuropoda melanoleuca]
Length = 166
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK-----Q 63
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 94 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKLPN 153
Query: 64 LKKREEVVIKDPS 76
K R DP
Sbjct: 154 TKIRSGGTAGDPG 166
>gi|118151296|ref|NP_001071582.1| homeobox protein Hox-B4 [Bos taurus]
gi|122132251|sp|Q08DG5.1|HXB4_BOVIN RecName: Full=Homeobox protein Hox-B4
gi|115305206|gb|AAI23762.1| Homeobox B4 [Bos taurus]
Length = 251
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|348522887|ref|XP_003448955.1| PREDICTED: homeobox protein Hox-A4 [Oreochromis niloticus]
Length = 305
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K+ K
Sbjct: 209 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHK 265
>gi|327280470|ref|XP_003224975.1| PREDICTED: homeobox protein Hox-A4-like [Anolis carolinensis]
Length = 326
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SL LSERQVKIWFQNRR K +K K
Sbjct: 228 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQVKIWFQNRRMKWKKDHK 284
>gi|253828363|gb|ACT36587.1| Anthox6a [Nematostella vectensis]
Length = 207
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRA-- 58
K T DK R +YS +Q +ELEKEFHY+RY+ R+ E+A SL L+E+QVKIWFQNRR
Sbjct: 64 KECTSDKNRTIYSTRQLVELEKEFHYNRYLCRPRRIEIAQSLELTEKQVKIWFQNRRMKW 123
Query: 59 -KERKQLKKREEVVIKDPSKDLFLSNKVMYTYL 90
KE K ++K E IK+ K+L N + L
Sbjct: 124 KKENKLVEKAIESEIKERVKNLSTQNPDGFGSL 156
Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
K T DK R +YS +Q +ELEKEFHY
Sbjct: 64 KECTSDKNRTIYSTRQLVELEKEFHY 89
>gi|194212079|ref|XP_001916880.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-C4-like [Equus
caballus]
Length = 269
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 165 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 218
>gi|10714|emb|CAA31546.1| homeo domain protein [Tripneustes gratilla]
Length = 127
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y+ Q LELEKEFH++RY+T RR+ EL++ LGL+ERQ+KIWFQNRR K +K+ K
Sbjct: 11 RCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKESKN 70
Query: 67 REEVVIKDPSKD 78
+EE V + +
Sbjct: 71 KEEGVSGEGDGE 82
>gi|359320350|ref|XP_003639319.1| PREDICTED: homeobox protein Hox-B4 [Canis lupus familiaris]
Length = 280
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|110625619|ref|NP_034589.3| homeobox protein Hox-B4 [Mus musculus]
gi|123266|sp|P10284.1|HXB4_MOUSE RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-2.6
gi|193944|gb|AAA37848.1| homeo box 2.6 (Hox-2.6) gene product [Mus musculus]
gi|74228946|dbj|BAE21943.1| unnamed protein product [Mus musculus]
gi|148684081|gb|EDL16028.1| homeobox B4 [Mus musculus]
Length = 250
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 165 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 221
>gi|431890741|gb|ELK01620.1| Homeobox protein Hox-B4 [Pteropus alecto]
Length = 207
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 122 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 178
>gi|354490227|ref|XP_003507261.1| PREDICTED: homeobox protein Hox-C4-like [Cricetulus griseus]
Length = 156
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 52 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 105
>gi|66364492|gb|AAH95947.1| Homeo box B4 [Mus musculus]
Length = 250
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 165 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 221
>gi|198278433|ref|NP_001094257.1| homeo box B4 [Rattus norvegicus]
gi|149053985|gb|EDM05802.1| similar to homeotic protein Hox B4 - mouse (predicted) [Rattus
norvegicus]
gi|171847054|gb|AAI61863.1| Hoxb4 protein [Rattus norvegicus]
Length = 250
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 165 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 221
>gi|332259413|ref|XP_003278784.1| PREDICTED: homeobox protein Hox-B4 [Nomascus leucogenys]
Length = 251
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|354474768|ref|XP_003499602.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B4-like
[Cricetulus griseus]
Length = 192
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 107 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 163
>gi|440910525|gb|ELR60319.1| Homeobox protein Hox-B4 [Bos grunniens mutus]
Length = 188
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 103 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 159
>gi|426238972|ref|XP_004013410.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B4 [Ovis
aries]
Length = 285
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 125 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 181
>gi|198453512|ref|XP_002137686.1| lab, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132389|gb|EDY68244.1| lab, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 691
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K+
Sbjct: 553 TNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKR 612
Query: 64 LKK 66
+K+
Sbjct: 613 VKE 615
>gi|195446461|ref|XP_002070791.1| GK10836 [Drosophila willistoni]
gi|194166876|gb|EDW81777.1| GK10836 [Drosophila willistoni]
Length = 668
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K+
Sbjct: 534 TNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKR 593
Query: 64 LKK 66
+K+
Sbjct: 594 VKE 596
>gi|195152109|ref|XP_002016979.1| GL22053 [Drosophila persimilis]
gi|194112036|gb|EDW34079.1| GL22053 [Drosophila persimilis]
Length = 644
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K+
Sbjct: 511 TNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKR 570
Query: 64 LKK 66
+K+
Sbjct: 571 VKE 573
>gi|121308833|dbj|BAF43723.1| transcription factor Hox4 [Metacrinus rotundus]
Length = 280
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A +LGLSERQ+KIWFQNRR K +K
Sbjct: 190 RTSYTRQQILELEKEFHFNRYLTRRRRIEIAQALGLSERQIKIWFQNRRMKWKK 243
>gi|405109806|emb|CCH51005.1| fushi tarazu, partial [Phalangium opilio]
Length = 281
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ Q LELEKEFH++RY+T RR+ E+A+SLGL+ERQ+KIWFQNRR K +K+
Sbjct: 221 RQTYTRIQTLELEKEFHFNRYLTRRRRIEIAHSLGLTERQIKIWFQNRRMKAKKE 275
>gi|311267494|ref|XP_003131596.1| PREDICTED: homeobox protein Hox-B4-like [Sus scrofa]
Length = 251
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|975241|gb|AAA75162.1| homeobox protein, partial [Mus musculus]
Length = 150
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 39 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 95
>gi|46275810|ref|NP_032291.1| homeobox protein Hox-A4 [Mus musculus]
gi|26345064|dbj|BAC36181.1| unnamed protein product [Mus musculus]
gi|148666239|gb|EDK98655.1| homeobox A4 [Mus musculus]
Length = 285
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 184 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 240
>gi|195498962|ref|XP_002096747.1| GE25839 [Drosophila yakuba]
gi|194182848|gb|EDW96459.1| GE25839 [Drosophila yakuba]
Length = 631
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K+
Sbjct: 503 TNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKR 562
Query: 64 LKK 66
+K+
Sbjct: 563 VKE 565
>gi|114184669|tpg|DAA05783.1| TPA_exp: Hoxb4a variant 2 [Danio rerio]
Length = 105
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 14 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 70
>gi|307187179|gb|EFN72419.1| Homeotic protein proboscipedia [Camponotus floridanus]
Length = 654
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q
Sbjct: 37 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 96
Query: 67 REEVVIKDPS 76
+E+ KD S
Sbjct: 97 KEDGDEKDGS 106
>gi|8182211|gb|AAB28662.2| Hoxa-4 [Mus sp.]
gi|9488660|gb|AAB30705.2| Hoxa-4 [Mus sp.]
Length = 285
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 184 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 240
>gi|6166218|sp|P06798.4|HXA4_MOUSE RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein MH-3
Length = 285
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 184 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 240
>gi|213513338|ref|NP_001133053.1| homeobox protein HoxB4ab [Salmo salar]
gi|157816109|gb|ABV82073.1| homeobox protein HoxB4ab [Salmo salar]
gi|158702281|gb|ABW77479.1| homeobox protien HoxB4ab [Salmo salar]
Length = 250
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLVLSERQIKIWFQNRRMKWKKDHK 212
>gi|213514276|ref|NP_001135380.1| homeobox protein HoxB4aa [Salmo salar]
gi|157816091|gb|ABV82064.1| homeobox protein HoxB4aa [Salmo salar]
gi|158702269|gb|ABW77468.1| homeobox protein HoxB4aa [Salmo salar]
gi|223649156|gb|ACN11336.1| Homeobox protein Hox-B4a [Salmo salar]
Length = 250
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLVLSERQIKIWFQNRRMKWKKDHK 212
>gi|13273315|ref|NP_076920.1| homeobox protein Hox-B4 [Homo sapiens]
gi|547692|sp|P17483.2|HXB4_HUMAN RecName: Full=Homeobox protein Hox-B4; AltName: Full=Homeobox
protein Hox-2.6; AltName: Full=Homeobox protein Hox-2F
gi|11138934|gb|AAG31554.1|AF287967_4 homeobox B4 [Homo sapiens]
gi|12007115|gb|AAG45052.1| HOXB4 [Homo sapiens]
gi|29351568|gb|AAH49204.1| Homeobox B4 [Homo sapiens]
gi|119615148|gb|EAW94742.1| homeobox B4 [Homo sapiens]
Length = 251
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|355753955|gb|EHH57920.1| hypothetical protein EGM_07665, partial [Macaca fascicularis]
Length = 127
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 61 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 117
>gi|114666360|ref|XP_001173043.1| PREDICTED: homeobox protein Hox-B4 [Pan troglodytes]
gi|397514562|ref|XP_003827550.1| PREDICTED: homeobox protein Hox-B4 [Pan paniscus]
Length = 251
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|297715929|ref|XP_002834296.1| PREDICTED: homeobox protein Hox-B4 [Pongo abelii]
Length = 251
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|385654459|gb|AFI61963.1| Hox-A4a [Anguilla japonica]
Length = 241
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K K
Sbjct: 149 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHAMCLSERQVKIWFQNRRMKWKKDHK 205
>gi|307213511|gb|EFN88920.1| Homeotic protein proboscipedia [Harpegnathos saltator]
Length = 731
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q
Sbjct: 37 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 96
Query: 67 REEVVIKDPS 76
+E+ KD S
Sbjct: 97 KEDGDEKDGS 106
>gi|156551129|ref|XP_001603788.1| PREDICTED: hypothetical protein LOC100120119 [Nasonia vitripennis]
Length = 918
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q
Sbjct: 220 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 279
Query: 67 REEVVIKD 74
++E KD
Sbjct: 280 KDEGDEKD 287
>gi|332692472|gb|AEE90154.1| Homeobox A4a [Anguilla anguilla]
Length = 241
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K K
Sbjct: 149 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHK 205
>gi|432882501|ref|XP_004074062.1| PREDICTED: homeobox protein Hox-A4-like [Oryzias latipes]
Length = 402
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K+ K
Sbjct: 306 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHK 362
>gi|344285931|ref|XP_003414713.1| PREDICTED: homeobox protein Hox-B4-like [Loxodonta africana]
Length = 251
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
>gi|6808023|emb|CAB70742.1| hypothetical protein [Homo sapiens]
Length = 246
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 161 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 217
>gi|293358572|ref|XP_002729358.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
gi|392347314|ref|XP_003749796.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
Length = 285
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 184 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 240
>gi|195570283|ref|XP_002103138.1| GD20268 [Drosophila simulans]
gi|194199065|gb|EDX12641.1| GD20268 [Drosophila simulans]
Length = 631
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 443 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 502
Query: 69 EV 70
E+
Sbjct: 503 EI 504
>gi|296488418|tpg|DAA30531.1| TPA: homeobox A4 isoform 2 [Bos taurus]
Length = 253
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 152 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 208
>gi|395738618|ref|XP_002818150.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4 [Pongo
abelii]
Length = 315
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 214 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 270
>gi|355695019|gb|AER99867.1| homeobox B4 [Mustela putorius furo]
Length = 214
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 67 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 123
>gi|410980977|ref|XP_003996850.1| PREDICTED: homeobox protein Hox-B4 [Felis catus]
Length = 188
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 103 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 159
>gi|387231711|gb|AFJ72566.1| homeobox C4, partial [Cynopterus sphinx]
Length = 117
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 13 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 66
>gi|387231709|gb|AFJ72565.1| homeobox C4, partial [Miniopterus schreibersii]
Length = 117
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 13 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 66
>gi|311275744|ref|XP_003134889.1| PREDICTED: homeobox protein Hox-A4-like [Sus scrofa]
Length = 329
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 226 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 282
>gi|170649677|gb|ACB21262.1| homeobox A4 (predicted) [Callicebus moloch]
Length = 324
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 223 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 279
>gi|301128888|emb|CBL59351.1| HoxB4 [Scyliorhinus canicula]
Length = 241
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 149 RTAYTRQQVLELEKEFHFNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 205
>gi|226822848|gb|ACO83083.1| homeobox A4 (predicted) [Dasypus novemcinctus]
Length = 318
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 218 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 274
>gi|274317370|ref|NP_001069602.2| homeobox protein Hox-A4 [Bos taurus]
gi|296488417|tpg|DAA30530.1| TPA: homeobox A4 isoform 1 [Bos taurus]
Length = 319
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 218 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 274
>gi|190576599|gb|ACE79087.1| homeobox A4 (predicted) [Sorex araneus]
Length = 298
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 201 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLSERQVKIWFQNRRMKWKKDHK 257
>gi|387231715|gb|AFJ72568.1| homeobox C4, partial [Aselliscus stoliczkanus]
Length = 117
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 13 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 66
>gi|18858853|ref|NP_571605.1| homeobox protein Hox-C6b [Danio rerio]
gi|60392445|sp|Q9PWM5.1|HXC6B_DANRE RecName: Full=Homeobox protein Hox-C6b
gi|4322100|gb|AAD15959.1| homeobox protein [Danio rerio]
Length = 227
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFHY+RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +K+
Sbjct: 139 RQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE 193
>gi|114612533|ref|XP_001162640.1| PREDICTED: homeobox protein Hox-A4 [Pan troglodytes]
Length = 320
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 219 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 275
>gi|410952542|ref|XP_003982938.1| PREDICTED: homeobox protein Hox-A4 [Felis catus]
Length = 385
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 284 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 340
>gi|190339031|gb|AAI63163.1| Hoxc6b protein [Danio rerio]
Length = 228
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFHY+RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +K+
Sbjct: 140 RQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE 194
>gi|281182584|ref|NP_001162367.1| homeobox protein Hox-A4 [Papio anubis]
gi|160904218|gb|ABX52202.1| homeobox A4 (predicted) [Papio anubis]
Length = 320
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 219 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 275
>gi|7446259|pir||S25846 homeotic protein Hox A4, testicular - mouse (fragment)
Length = 155
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQL 64
++ R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K
Sbjct: 9 PERSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDH 68
Query: 65 K 65
K
Sbjct: 69 K 69
>gi|390351573|ref|XP_003727685.1| PREDICTED: homeobox protein Hox-A6-like [Strongylocentrotus
purpuratus]
Length = 280
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
T + R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K
Sbjct: 188 GTEPSKRSRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKW 247
Query: 61 RKQ--LKKREEVVIKDPSKDL 79
+K+ +K +++ ++ + +L
Sbjct: 248 KKEHNVKSISQLISQEAAANL 268
>gi|184289|gb|AAA58664.1| Hox 1.4 [Homo sapiens]
Length = 320
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 219 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 275
>gi|359754085|gb|AEV59508.1| HOXA4 [Macropus eugenii]
Length = 295
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 201 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 257
>gi|351704294|gb|EHB07213.1| Homeobox protein Hox-A4 [Heterocephalus glaber]
Length = 153
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 50 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 106
>gi|51374|emb|CAA31889.1| Hox-1.4 protein (147 AA) [Mus musculus]
Length = 147
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 5 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 61
>gi|440899270|gb|ELR50599.1| Homeobox protein Hox-A4, partial [Bos grunniens mutus]
Length = 170
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 69 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 125
>gi|208966492|dbj|BAG73260.1| homeobox A4 [synthetic construct]
Length = 320
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 219 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 275
>gi|332242652|ref|XP_003270497.1| PREDICTED: homeobox protein Hox-A5-like isoform 3 [Nomascus
leucogenys]
Length = 326
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 225 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 281
>gi|148613882|ref|NP_002132.3| homeobox protein Hox-A4 [Homo sapiens]
gi|116242514|sp|Q00056.3|HXA4_HUMAN RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein Hox-1D
gi|51094980|gb|EAL24224.1| homeo box A4 [Homo sapiens]
gi|119614278|gb|EAW93872.1| homeobox A4 [Homo sapiens]
gi|182887795|gb|AAI60036.1| Homeobox A4 [synthetic construct]
Length = 320
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 219 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 275
>gi|348562611|ref|XP_003467103.1| PREDICTED: homeobox protein Hox-B2-like [Cavia porcellus]
Length = 572
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 46/62 (74%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q LELEKEFH+++Y+ R+ E+A L L+ERQVK+WFQNRR K ++Q +
Sbjct: 355 RLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQH 414
Query: 67 RE 68
RE
Sbjct: 415 RE 416
>gi|344270550|ref|XP_003407107.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4-like
[Loxodonta africana]
Length = 326
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 223 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 279
>gi|4322060|gb|AAD15939.1| homeobox protein [Danio rerio]
Length = 244
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K K
Sbjct: 151 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHK 207
>gi|598438|gb|AAA56866.1| developmental protein, partial [Danio rerio]
Length = 92
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 20 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 76
>gi|358336509|dbj|GAA54999.1| homeobox protein abdominal-A [Clonorchis sinensis]
Length = 341
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRA---KERKQLK 65
R YS Q LELEKEF YS Y+T RR+ E+A+SL L+ERQ+KIWFQNRR KER+Q++
Sbjct: 119 RQTYSRYQTLELEKEFQYSHYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKLKKERQQIR 178
Query: 66 KREEVVIKDPSKDLFLSN-KVMYTYL-VFQVKIWFQNRRAKERKQLKKREEVVIKDPSKD 123
+ + + ++D N YL + Q ++ N+ + + +L + ++ K P
Sbjct: 179 ELNDESCRRSTRDSSHPNLDSSNPYLGLLQSSQYYSNKNSGDSSELPEASQLDCKPP--- 235
Query: 124 LFLSNKVMIRKI 135
++ VM+ KI
Sbjct: 236 -IDADTVMLPKI 246
>gi|301612429|ref|XP_002935718.1| PREDICTED: homeobox protein Hox-D4a-like isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301612431|ref|XP_002935719.1| PREDICTED: homeobox protein Hox-D4a-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 237
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|167427227|gb|ABZ80208.1| homeobox A4 (predicted) [Callithrix jacchus]
Length = 322
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 221 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 277
>gi|426355746|ref|XP_004045269.1| PREDICTED: homeobox protein Hox-A4 [Gorilla gorilla gorilla]
Length = 187
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 86 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 142
>gi|18858847|ref|NP_571197.1| homeobox protein Hox-C4a [Danio rerio]
gi|60392444|sp|Q9PWM3.1|HXC4A_DANRE RecName: Full=Homeobox protein Hox-C4a; Short=Hox-C4
gi|4322096|gb|AAD15957.1| homeobox protein [Danio rerio]
gi|62531038|gb|AAH92923.1| Homeo box C4a [Danio rerio]
gi|182890522|gb|AAI64612.1| Hoxc4a protein [Danio rerio]
Length = 268
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 158 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 211
>gi|426228408|ref|XP_004008301.1| PREDICTED: homeobox protein Hox-A4 [Ovis aries]
Length = 218
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K
Sbjct: 117 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 170
>gi|284005063|ref|NP_001164871.1| homeobox protein Hox-A4 [Oryctolagus cuniculus]
gi|217418307|gb|ACK44309.1| homeobox A4 (predicted) [Oryctolagus cuniculus]
Length = 319
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 220 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLSERQVKIWFQNRRMKWKKDHK 276
>gi|395830944|ref|XP_003788572.1| PREDICTED: homeobox protein Hox-A4 [Otolemur garnettii]
gi|202070726|gb|ACH95314.1| homeobox A4 (predicted) [Otolemur garnettii]
Length = 318
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 223 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 279
>gi|213511004|ref|NP_001133041.1| homeobox protein HoxA4an [Salmo salar]
gi|157816065|gb|ABV82051.1| homeobox protein HoxA4an [Salmo salar]
gi|158702244|gb|ABW77453.1| homeobox protein HoxA4ab [Salmo salar]
Length = 246
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K K
Sbjct: 152 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHK 208
>gi|113205492|ref|NP_571610.1| homeobox protein Hox-A4a [Danio rerio]
gi|110282968|sp|Q9PWL5.2|HXA4A_DANRE RecName: Full=Homeobox protein Hox-A4a; AltName: Full=Homeobox
protein Zf-26; AltName: Full=Hoxx4
gi|112419000|gb|AAI22458.1| Homeo box A4a [Danio rerio]
Length = 245
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K K
Sbjct: 151 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHK 207
>gi|403288103|ref|XP_003935254.1| PREDICTED: homeobox protein Hox-A4, partial [Saimiri boliviensis
boliviensis]
Length = 163
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 60 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 116
>gi|332692514|gb|AEE90191.1| Homeobox C4a [Anguilla anguilla]
Length = 277
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 164 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 217
>gi|224041|prf||1008211B fushi tarazu gene
Length = 435
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Query: 2 TRTKDKYRV--VYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
+R KD R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K
Sbjct: 274 SRCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMK 333
Query: 60 ERK 62
+K
Sbjct: 334 SKK 336
>gi|393905638|gb|EFO22714.2| homeobox protein lin-39, partial [Loa loa]
Length = 101
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
R + + R Y+ Q LELEKEFH+++Y+T +R+ E+A+SL L+ERQVKIWFQNRR K +
Sbjct: 4 NRGEKRQRTAYTRNQVLELEKEFHFNKYLTRKRRIEIAHSLMLTERQVKIWFQNRRMKHK 63
Query: 62 KQLKKREEVVIKDPSKDL 79
K+ K + + P+ L
Sbjct: 64 KENKDKPAPTVPFPAGAL 81
>gi|291290871|ref|NP_001167466.1| homeobox D4 [Xenopus laevis]
gi|83405607|gb|AAI10766.1| Unknown (protein for MGC:131092) [Xenopus laevis]
Length = 237
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|344252749|gb|EGW08853.1| Homeobox protein Hox-A5 [Cricetulus griseus]
Length = 222
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 72/134 (53%), Gaps = 35/134 (26%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K +
Sbjct: 47 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 106
Query: 69 EVVIKDPSKDL---------------------FLSNK---------VMYTYLVF--QVKI 96
+ +PS + F N+ + +T + QVKI
Sbjct: 107 MI---NPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKI 163
Query: 97 WFQNRRAKERKQLK 110
WFQNRR K +K K
Sbjct: 164 WFQNRRMKWKKDHK 177
>gi|255661319|gb|ACU25815.1| homeobox protein C4b [Anguilla japonica]
Length = 204
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 144 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 197
>gi|385654507|gb|AFI62004.1| Hox-C4a [Anguilla japonica]
Length = 277
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 164 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 217
>gi|37528845|gb|AAQ92348.1| transcription factor HoxA4, partial [Pleurodeles waltl]
Length = 145
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 53 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 109
>gi|359321212|ref|XP_539486.3| PREDICTED: homeobox protein Hox-A4 [Canis lupus familiaris]
Length = 317
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 216 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 272
>gi|344249143|gb|EGW05247.1| Homeobox protein Hox-B4 [Cricetulus griseus]
Length = 189
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 104 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 160
>gi|195152063|ref|XP_002016958.1| GL21778 [Drosophila persimilis]
gi|194112015|gb|EDW34058.1| GL21778 [Drosophila persimilis]
Length = 471
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 294 RQTYTRYQTLELEKEFHFNRYITRRRRVDIANALSLSERQIKIWFQNRRMKSKK 347
>gi|387598538|gb|AFJ91925.1| homeodomain transcription factor Lox5 [Platynereis dumerilii]
Length = 321
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ Q LELEKEFHY+RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+
Sbjct: 198 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKE 252
>gi|429510516|gb|AFZ94996.1| Hox4-like protein 2 [Petromyzon marinus]
Length = 371
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 178 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHK 234
>gi|76825416|gb|AAI07173.1| Hoxa4 protein [Mus musculus]
Length = 187
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 86 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 142
>gi|390178647|ref|XP_001359214.3| ftz [Drosophila pseudoobscura pseudoobscura]
gi|388859530|gb|EAL28359.3| ftz [Drosophila pseudoobscura pseudoobscura]
Length = 467
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 290 RQTYTRYQTLELEKEFHFNRYITRRRRVDIANALSLSERQIKIWFQNRRMKSKK 343
>gi|259013344|ref|NP_001158380.1| homeobox 7 [Saccoglossus kowalevskii]
gi|116294310|gb|AAP79287.2| hox 7 [Saccoglossus kowalevskii]
Length = 263
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 49/62 (79%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQL 64
K + R Y+ Q LELEKEFHY+RY+T RR+ EL++ LGL+ERQ+KIWFQNRR K +K+
Sbjct: 152 KKRCRQTYTRYQTLELEKEFHYNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKES 211
Query: 65 KK 66
KK
Sbjct: 212 KK 213
>gi|62958648|gb|AAY23649.1| Hox protein [Oreochromis niloticus]
Length = 100
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 14 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 70
>gi|27374286|gb|AAO01040.1| ftz-PA [Drosophila pseudoobscura]
Length = 464
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 291 RQTYTRYQTLELEKEFHFNRYITRRRRVDIANALSLSERQIKIWFQNRRMKSKK 344
>gi|17136284|ref|NP_476613.1| labial, isoform A [Drosophila melanogaster]
gi|4389441|gb|AAD19811.1| homeodomain protein [Drosophila melanogaster]
gi|7298892|gb|AAF54098.1| labial, isoform A [Drosophila melanogaster]
gi|20152115|gb|AAM11417.1| RE63854p [Drosophila melanogaster]
gi|220942552|gb|ACL83819.1| lab-PA [synthetic construct]
gi|220960292|gb|ACL92682.1| lab-PA [synthetic construct]
Length = 629
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 48/58 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K++K+
Sbjct: 505 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKE 562
>gi|6015509|emb|CAB57787.1| labial protein [Drosophila melanogaster]
Length = 629
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 48/58 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K++K+
Sbjct: 505 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKE 562
>gi|26006977|sp|P10105.2|LAB_DROME RecName: Full=Homeotic protein labial; AltName: Full=F24; AltName:
Full=F90-2
Length = 635
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 48/58 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K++K+
Sbjct: 511 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKE 568
>gi|6015508|emb|CAB57786.1| labial protein [Drosophila melanogaster]
Length = 635
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 48/58 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K++K+
Sbjct: 511 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKE 568
>gi|194899107|ref|XP_001979104.1| GG10324 [Drosophila erecta]
gi|190650807|gb|EDV48062.1| GG10324 [Drosophila erecta]
Length = 632
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 48/58 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K++K+
Sbjct: 508 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKE 565
>gi|255742461|gb|ACU32574.1| homeobox protein HoxC4 [Callorhinchus milii]
Length = 256
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 219
>gi|123204501|gb|ABM73570.1| homeodomain protein [Megalobrama amblycephala]
Length = 208
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K
Sbjct: 158 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMK 208
>gi|47217000|emb|CAG01628.1| unnamed protein product [Tetraodon nigroviridis]
Length = 778
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/57 (59%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 697 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 753
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 3 RTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQ 48
R+ K R Y+ Q LELEKEF ++ Y+T R+ E+A +L L+ERQ
Sbjct: 235 RSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARALNLTERQ 280
>gi|24647534|ref|NP_732176.1| abdominal A, isoform B [Drosophila melanogaster]
gi|1708230|sp|P29555.2|ABDA_DROME RecName: Full=Homeobox protein abdominal-A
gi|969083|gb|AAA84405.1| ABD-AII [Drosophila melanogaster]
gi|23171502|gb|AAF55360.2| abdominal A, isoform B [Drosophila melanogaster]
Length = 590
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 402 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 461
Query: 69 EV 70
E+
Sbjct: 462 EI 463
>gi|332242650|ref|XP_003270496.1| PREDICTED: homeobox protein Hox-A5-like isoform 2 [Nomascus
leucogenys]
Length = 302
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 201 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 257
>gi|195349268|ref|XP_002041167.1| GM15405 [Drosophila sechellia]
gi|194122772|gb|EDW44815.1| GM15405 [Drosophila sechellia]
Length = 588
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 400 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 459
Query: 69 EV 70
E+
Sbjct: 460 EI 461
>gi|195146386|ref|XP_002014167.1| GL23002 [Drosophila persimilis]
gi|194103110|gb|EDW25153.1| GL23002 [Drosophila persimilis]
Length = 562
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 378 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 437
Query: 69 EV 70
E+
Sbjct: 438 EI 439
>gi|194742540|ref|XP_001953759.1| GF17922 [Drosophila ananassae]
gi|190626796|gb|EDV42320.1| GF17922 [Drosophila ananassae]
Length = 596
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 404 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 463
Query: 69 EV 70
E+
Sbjct: 464 EI 465
>gi|387231067|gb|AFJ72244.1| homeobox A4, partial [Balaenoptera physalus]
Length = 117
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 12 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 68
>gi|2661805|emb|CAA74872.1| Hoxy6 protein [Danio rerio]
Length = 92
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFHY+RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +K+
Sbjct: 4 RQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE 58
>gi|431909013|gb|ELK12604.1| Homeobox protein Hox-A4 [Pteropus alecto]
Length = 125
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 22 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 78
>gi|332692525|gb|AEE90201.1| Homeobox C4b [Anguilla anguilla]
Length = 272
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 159 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 212
>gi|255742436|gb|ACU32551.1| homeobox protein HoxA4 [Callorhinchus milii]
Length = 247
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 153 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 209
>gi|224045300|ref|XP_002194850.1| PREDICTED: homeobox protein Hox-A4 [Taeniopygia guttata]
Length = 306
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 211 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 267
>gi|266457590|ref|NP_001161164.1| antennapedia-like protein [Nasonia vitripennis]
gi|254047496|gb|ACT63883.1| Antennapedia-like protein [Nasonia vitripennis]
Length = 362
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 284 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKETKTKG 343
Query: 69 EVVIKDPSKDL 79
E D D+
Sbjct: 344 EPNSGDGDTDI 354
>gi|355694997|gb|AER99859.1| homeobox A4 [Mustela putorius furo]
Length = 141
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 41 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 97
>gi|387231039|gb|AFJ72230.1| homeobox A4, partial [Rousettus leschenaultii]
Length = 114
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|332242648|ref|XP_003270495.1| PREDICTED: homeobox protein Hox-A5-like isoform 1 [Nomascus
leucogenys]
Length = 300
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 199 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 255
>gi|301128876|emb|CBL59340.1| HoxA4 [Scyliorhinus canicula]
Length = 247
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 153 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 209
>gi|194742056|ref|XP_001953523.1| GF17803 [Drosophila ananassae]
gi|190626560|gb|EDV42084.1| GF17803 [Drosophila ananassae]
Length = 610
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 49/63 (77%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K+
Sbjct: 483 TNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKR 542
Query: 64 LKK 66
K+
Sbjct: 543 QKE 545
>gi|385654518|gb|AFI62014.1| Hox-C4b [Anguilla japonica]
Length = 272
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 159 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 212
>gi|14916594|sp|Q9IA22.1|HXA4_HETFR RecName: Full=Homeobox protein Hox-A4
gi|7271831|gb|AAF44642.1|AF224262_4 HoxA4 [Heterodontus francisci]
Length = 247
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 153 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 209
>gi|301754117|ref|XP_002912920.1| PREDICTED: homeobox protein Hox-A4-like [Ailuropoda melanoleuca]
Length = 164
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 63 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 119
>gi|397472982|ref|XP_003808006.1| PREDICTED: homeobox protein Hox-A4 [Pan paniscus]
Length = 175
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 74 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 130
>gi|443689501|gb|ELT91875.1| hypothetical protein CAPTEDRAFT_219807 [Capitella teleta]
Length = 305
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R ++++Q ELEKEFH+++Y+T R+ E+A SLGL+E QVKIWFQNRR K++K+LK+
Sbjct: 224 RTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQVKIWFQNRRMKQKKRLKENT 283
Query: 69 EVV-IKDPSKD 78
+ D S+D
Sbjct: 284 STTPVSDSSQD 294
>gi|281349542|gb|EFB25126.1| hypothetical protein PANDA_000660 [Ailuropoda melanoleuca]
Length = 130
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 29 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 85
>gi|354479684|ref|XP_003502039.1| PREDICTED: homeobox protein Hox-A4-like [Cricetulus griseus]
Length = 138
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 37 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 93
>gi|387231371|gb|AFJ72396.1| homeobox B4, partial [Rhinolophus macrotis]
gi|387231379|gb|AFJ72400.1| homeobox B4, partial [Aselliscus stoliczkanus]
Length = 98
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 69
>gi|338711488|ref|XP_003362539.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B4-like [Equus
caballus]
Length = 145
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 60 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 116
>gi|403280027|ref|XP_003931540.1| PREDICTED: homeobox protein Hox-B3 [Saimiri boliviensis
boliviensis]
Length = 744
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y+ Q +ELEKEFH++RY+ R+ E+AN L LSERQ+KIWFQNRR K +K K
Sbjct: 503 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKA 562
Query: 67 R 67
+
Sbjct: 563 K 563
>gi|158714012|gb|ABW79873.1| HoxD-like protein [Schmidtea mediterranea]
Length = 211
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 6/67 (8%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R YS QQ LELEKEF+Y++Y+T RR+ E+ANS+ LSERQ+KIWFQNRR +K ++
Sbjct: 151 RQAYSRQQTLELEKEFYYNQYLTRRRRIEIANSVCLSERQIKIWFQNRR------MKYKK 204
Query: 69 EVVIKDP 75
+ + K+P
Sbjct: 205 DAISKNP 211
>gi|165873655|gb|ABY67952.1| labial hox protein [Capitella teleta]
Length = 296
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R ++++Q ELEKEFH+++Y+T R+ E+A SLGL+E QVKIWFQNRR K++K+LK+
Sbjct: 215 RTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQVKIWFQNRRMKQKKRLKENT 274
Query: 69 EVV-IKDPSKD 78
+ D S+D
Sbjct: 275 STTPVSDSSQD 285
>gi|254212178|gb|ACT65753.1| Hoxa4 [Leucoraja erinacea]
Length = 245
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 207
>gi|198453096|ref|XP_002137595.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
gi|198132210|gb|EDY68153.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
Length = 560
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 376 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 435
Query: 69 EV 70
E+
Sbjct: 436 EI 437
>gi|939889|emb|CAA34296.1| HOX-2.6 protein (68 AA) [Homo sapiens]
Length = 68
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 7 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 63
>gi|81673924|gb|AAI09945.1| Homeobox A4 [Bos taurus]
Length = 253
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+ L LSERQVKIWFQNRR K +K K
Sbjct: 152 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHKLCLSERQVKIWFQNRRMKWKKDHK 208
>gi|348521582|ref|XP_003448305.1| PREDICTED: homeobox protein Hox-C4a [Oreochromis niloticus]
Length = 270
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 164 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 217
>gi|387231383|gb|AFJ72402.1| homeobox B4, partial [Rousettus leschenaultii]
Length = 98
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 69
>gi|193958|gb|AAA16440.1| Hox-1.4, partial [Mus musculus]
Length = 106
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 5 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 61
>gi|387231373|gb|AFJ72397.1| homeobox B4, partial [Myotis ricketti]
gi|387231377|gb|AFJ72399.1| homeobox B4, partial [Cynopterus sphinx]
Length = 98
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 69
>gi|195498911|ref|XP_002096728.1| GE24884 [Drosophila yakuba]
gi|194182829|gb|EDW96440.1| GE24884 [Drosophila yakuba]
Length = 421
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 265 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 318
>gi|387231055|gb|AFJ72238.1| homeobox A4, partial [Rhinolophus ferrumequinum]
Length = 114
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|71896405|ref|NP_001025517.1| homeobox protein Hox-A4 [Gallus gallus]
gi|363730020|ref|XP_003640746.1| PREDICTED: homeobox protein Hox-A4-like [Gallus gallus]
gi|123228|sp|P17277.1|HXA4_CHICK RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; Short=Chox-1.4
gi|63219|emb|CAA36896.1| unnamed protein product [Gallus gallus]
Length = 309
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 213 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 269
>gi|387231043|gb|AFJ72232.1| homeobox A4, partial [Eonycteris spelaea]
Length = 114
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|328778406|ref|XP_394125.4| PREDICTED: hypothetical protein LOC410648 [Apis mellifera]
Length = 682
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q
Sbjct: 13 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 72
Query: 67 REEVVIKDPS 76
+E+ KD S
Sbjct: 73 KEDGDEKDGS 82
>gi|255742444|gb|ACU32558.1| homeobox protein HoxB4 [Callorhinchus milii]
Length = 243
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRVEIAHNLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|213513586|ref|NP_001133002.1| homeobox protein HoxC4aa [Salmo salar]
gi|157815946|gb|ABV81992.1| homeobox protein HoxC4aa [Salmo salar]
gi|158702316|gb|ABW77509.1| homeobox protein HoxC4aa [Salmo salar]
Length = 269
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 161 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 214
>gi|38004412|gb|AAR07505.1| Abd-A-like protein [Schistosoma mansoni]
Length = 718
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRR---AKERKQLK 65
R YS Q LELEKEF YS Y+T RR+ E+A++L L+ERQ+KIWFQNRR KER+Q+K
Sbjct: 517 RQTYSRYQTLELEKEFQYSHYLTRRRRIEIAHNLCLTERQIKIWFQNRRMKLKKERQQIK 576
Query: 66 KREEVVIKDPSKD 78
+ + + + D
Sbjct: 577 ELNDETTRQTTVD 589
>gi|387231045|gb|AFJ72233.1| homeobox A4, partial [Rhinolophus macrotis]
gi|387231051|gb|AFJ72236.1| homeobox A4, partial [Taphozous melanopogon]
Length = 114
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|146324933|sp|A2D4P8.1|HXD4_ATEGE RecName: Full=Homeobox protein Hox-D4
gi|146324935|sp|A2D5I1.1|HXD4_LAGLA RecName: Full=Homeobox protein Hox-D4
gi|122053832|gb|ABM65895.1| HOXD4 [Ateles geoffroyi]
gi|122934866|gb|ABM68173.1| HOXD4 [Lagothrix lagotricha]
Length = 255
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|66476105|gb|AAX63752.2| HoxA4ai [Oncorhynchus mykiss]
Length = 207
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K
Sbjct: 152 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKK 205
>gi|387231375|gb|AFJ72398.1| homeobox B4, partial [Taphozous melanopogon]
Length = 93
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 8 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 64
>gi|312125851|gb|ADQ27869.1| fushi tarazu [Forficula auricularia]
Length = 191
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
T + R YS Q LELEKEFH+++Y+T RR+ E+AN+L L+ERQ+KIWFQNRR KE+
Sbjct: 26 TSGSKRSRQTYSRYQTLELEKEFHFNKYLTRRRRIEIANALHLTERQIKIWFQNRRMKEK 85
Query: 62 K 62
K
Sbjct: 86 K 86
>gi|332692533|gb|AEE90208.1| Homeobox D4a [Anguilla anguilla]
gi|385654530|gb|AFI62024.1| Hox-D4a [Anguilla japonica]
Length = 236
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|158702338|gb|ABW77528.1| homeobox protein HoxC4ab [Salmo salar]
Length = 269
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 161 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 214
>gi|213513558|ref|NP_001135092.1| homeobox protein HoxC4ab [Salmo salar]
gi|157815964|gb|ABV82001.1| homeobox protein HoxC4ab [Salmo salar]
Length = 269
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 161 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 214
>gi|387231047|gb|AFJ72234.1| homeobox A4, partial [Hipposideros armiger]
Length = 114
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|74267579|dbj|BAE44288.1| hoxD4a [Oryzias latipes]
gi|83016979|dbj|BAE53500.1| hoxD4a [Oryzias latipes]
Length = 236
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|387231037|gb|AFJ72229.1| homeobox A4, partial [Hipposideros pomona]
gi|387231049|gb|AFJ72235.1| homeobox A4, partial [Rhinolophus paradoxolophus]
gi|387231053|gb|AFJ72237.1| homeobox A4, partial [Rhinolophus marshalli]
gi|387231063|gb|AFJ72242.1| homeobox A4, partial [Rhinolophus pusillus]
Length = 114
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|28629659|gb|AAO43035.1| HoxC4 [Latimeria menadoensis]
Length = 115
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 13 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 66
>gi|194900573|ref|XP_001979830.1| GG16810 [Drosophila erecta]
gi|190651533|gb|EDV48788.1| GG16810 [Drosophila erecta]
Length = 592
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 402 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 461
Query: 69 EV 70
E+
Sbjct: 462 EI 463
>gi|158508520|ref|NP_034599.2| homeobox protein Hox-D4 [Mus musculus]
gi|114152826|sp|P10628.3|HXD4_MOUSE RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-4.2; AltName: Full=Homeobox protein Hox-5.1
gi|74183224|dbj|BAE22547.1| unnamed protein product [Mus musculus]
Length = 250
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|157786818|ref|NP_001099355.1| homeo box D4 [Rattus norvegicus]
gi|149022292|gb|EDL79186.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
gi|149022293|gb|EDL79187.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|395519807|ref|XP_003764033.1| PREDICTED: homeobox protein Hox-D4 [Sarcophilus harrisii]
Length = 238
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|344246570|gb|EGW02674.1| Homeobox protein Hox-D10 [Cricetulus griseus]
Length = 371
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 229 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 285
>gi|154183820|gb|ABS70761.1| Hoxc4a [Haplochromis burtoni]
Length = 265
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 159 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 212
>gi|392495361|gb|AFM74330.1| homeodomain protein HoxA4ai, partial [tetraploid Carassius auratus
red var. x Megalobrama amblycephala]
Length = 206
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K
Sbjct: 151 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKK 204
>gi|123204519|gb|ABM73573.1| homeodomain protein [Megalobrama amblycephala]
Length = 201
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R YS Q LELEKEFHY+RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +K+
Sbjct: 142 RQTYSRYQTLELEKEFHYNRYLTRRRRIEIANALCLSERQIKIWFQNRRMKWKKE 196
>gi|449510800|ref|XP_002199453.2| PREDICTED: homeobox protein Hox-C4-like, partial [Taeniopygia
guttata]
Length = 102
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 17 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHALSLSERQIKIWFQNRRMKWKK 70
>gi|14916602|sp|Q9PWD4.1|HXA7_MORSA RecName: Full=Homeobox protein Hox-A7
gi|5669603|gb|AAD46397.1|AF089743_3 homeodomain protein Hox-A7 [Morone saxatilis]
Length = 225
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T+ + R YS Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 125 TRKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 184
Query: 64 LKKREEVVIKDPSKDL 79
K E V KD
Sbjct: 185 -HKEEPVSTPSGEKDC 199
>gi|146324938|sp|A1YFD8.1|HXD4_SAGLB RecName: Full=Homeobox protein Hox-D4
gi|121221996|gb|ABM47600.1| HOXD4 [Saguinus labiatus]
Length = 255
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|195500182|ref|XP_002097264.1| GE26127 [Drosophila yakuba]
gi|194183365|gb|EDW96976.1| GE26127 [Drosophila yakuba]
Length = 590
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 402 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 461
Query: 69 EV 70
E+
Sbjct: 462 EI 463
>gi|391337014|ref|XP_003742869.1| PREDICTED: uncharacterized protein LOC100904659 [Metaseiulus
occidentalis]
Length = 330
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
T + R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K
Sbjct: 222 PTSAPKRTRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKA 281
Query: 61 RKQLKKREEVV 71
+K+ K + ++
Sbjct: 282 KKESKLQNGLI 292
>gi|213514274|ref|NP_001135096.1| homeobox protein HoxA4aa [Salmo salar]
gi|157816045|gb|ABV82041.1| homeobox protein HoxA4aa [Salmo salar]
gi|158702224|gb|ABW77443.1| homeobox protein HoxA4aa [Salmo salar]
Length = 253
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ L+ERQVKIWFQNRR K +K K
Sbjct: 153 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLTERQVKIWFQNRRMKWKKDHK 209
>gi|2582183|gb|AAB82458.1| LOX6 [Hirudo medicinalis]
Length = 265
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
+ R YS Q LELEKEFH++RY+ RR+ E+A+SLGL+ERQ+KIWFQNRR K +K
Sbjct: 96 RARTSYSRYQTLELEKEFHFNRYLNGRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 151
>gi|5441267|dbj|BAA82361.1| Hoxd-4 [Paralichthys olivaceus]
Length = 235
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|395837223|ref|XP_003791540.1| PREDICTED: homeobox protein Hox-D4 [Otolemur garnettii]
Length = 260
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 159 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 215
>gi|133778294|gb|AAI26995.2| HOXA4 protein [Homo sapiens]
Length = 118
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 17 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 73
>gi|359754118|gb|AEV59538.1| HOXD4 [Macropus eugenii]
Length = 238
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|254692756|dbj|BAH23873.2| transcription factor Hox4 [Balanoglossus misakiensis]
Length = 209
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQVKIWFQNRR K +K
Sbjct: 123 RTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHALGLTERQVKIWFQNRRMKWKK 176
>gi|213510804|ref|NP_001133014.1| homeobox protein HoxC4ba [Salmo salar]
gi|157815984|gb|ABV82011.1| homeobox protein HoxC4ba [Salmo salar]
gi|158702350|gb|ABW77539.1| homeobox protein HoxC4ba [Salmo salar]
Length = 274
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 213
>gi|188504142|gb|ACD56189.1| FTZ [Drosophila simulans]
Length = 413
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 261 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 314
>gi|66476106|gb|AAX63753.2| HoxA4aii [Oncorhynchus mykiss]
Length = 250
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ L+ERQVKIWFQNRR K +K K
Sbjct: 152 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLTERQVKIWFQNRRMKWKKDHK 208
>gi|60678587|gb|AAX33663.1| Dbuz\pb-PD [Drosophila buzzatii]
Length = 753
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 166 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 225
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 226 KTDDEDNKDSLK 237
>gi|60678584|gb|AAX33660.1| Dbuz\pb-PA [Drosophila buzzatii]
Length = 763
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 176 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 235
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 236 KTDDEDNKDSLK 247
>gi|60678585|gb|AAX33661.1| Dbuz\pb-PC [Drosophila buzzatii]
Length = 758
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 171 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 230
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 231 KTDDEDNKDSLK 242
>gi|60678586|gb|AAX33662.1| Dbuz\pb-PB [Drosophila buzzatii]
Length = 758
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 171 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 230
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 231 KTDDEDNKDSLK 242
>gi|45553271|ref|NP_996162.1| proboscipedia, isoform C [Drosophila melanogaster]
gi|45446403|gb|AAS65119.1| proboscipedia, isoform C [Drosophila melanogaster]
Length = 777
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 195 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 254
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 255 KTDDEDNKDSLK 266
>gi|45553267|ref|NP_996161.1| proboscipedia, isoform D [Drosophila melanogaster]
gi|45446402|gb|AAS65118.1| proboscipedia, isoform D [Drosophila melanogaster]
Length = 772
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 190 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 249
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 250 KTDDEDNKDSLK 261
>gi|45553273|ref|NP_996163.1| proboscipedia, isoform B [Drosophila melanogaster]
gi|45446404|gb|AAS65120.1| proboscipedia, isoform B [Drosophila melanogaster]
Length = 777
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 195 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 254
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 255 KTDDEDNKDSLK 266
>gi|45549028|ref|NP_476669.3| proboscipedia, isoform A [Drosophila melanogaster]
gi|32470599|sp|P31264.2|HMPB_DROME RecName: Full=Homeotic protein proboscipedia
gi|4389432|gb|AAD19802.1| homeodomain protein [Drosophila melanogaster]
gi|45446405|gb|AAF54089.3| proboscipedia, isoform A [Drosophila melanogaster]
Length = 782
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 200 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 259
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 260 KTDDEDNKDSLK 271
>gi|410899430|ref|XP_003963200.1| PREDICTED: homeobox protein Hox-C4a-like [Takifugu rubripes]
Length = 269
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 164 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHALVLSERQIKIWFQNRRMKWKK 217
>gi|195568805|ref|XP_002102404.1| GD19525 [Drosophila simulans]
gi|194198331|gb|EDX11907.1| GD19525 [Drosophila simulans]
Length = 789
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 203 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 262
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 263 KTDDEDNKDSLK 274
>gi|195110435|ref|XP_001999785.1| GI24721 [Drosophila mojavensis]
gi|193916379|gb|EDW15246.1| GI24721 [Drosophila mojavensis]
Length = 773
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 178 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 237
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 238 KTDDEDNKDSLK 249
>gi|195038435|ref|XP_001990663.1| GH19484 [Drosophila grimshawi]
gi|193894859|gb|EDV93725.1| GH19484 [Drosophila grimshawi]
Length = 787
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 170 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 229
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 230 KTDDEDNKDSLK 241
>gi|194899125|ref|XP_001979113.1| GG10269 [Drosophila erecta]
gi|190650816|gb|EDV48071.1| GG10269 [Drosophila erecta]
Length = 811
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 224 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 283
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 284 KTDDEDNKDSLK 295
>gi|194742038|ref|XP_001953514.1| GF17798 [Drosophila ananassae]
gi|190626551|gb|EDV42075.1| GF17798 [Drosophila ananassae]
Length = 790
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 199 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 258
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 259 KTDDEDNKDSLK 270
>gi|164430219|gb|ABY55437.1| ftz [Drosophila mauritiana]
gi|164430221|gb|ABY55438.1| ftz [Drosophila mauritiana]
Length = 413
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 261 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 314
>gi|149639536|ref|XP_001516048.1| PREDICTED: homeobox protein Hox-D4-like [Ornithorhynchus anatinus]
Length = 239
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 152 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 208
>gi|7599|emb|CAA45272.1| proboscipedia [Drosophila melanogaster]
gi|8376|emb|CAA45271.1| proboscipedia [Drosophila melanogaster]
gi|248601|gb|AAA08526.1| proboscipedia [Drosophila melanogaster]
Length = 798
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 200 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 259
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 260 KTDDEDNKDSLK 271
>gi|193952|gb|AAA20072.1| homeobox protein [Mus musculus]
Length = 248
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 154 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 210
>gi|402888721|ref|XP_003907700.1| PREDICTED: homeobox protein Hox-D4 [Papio anubis]
Length = 255
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|188504140|gb|ACD56188.1| FTZ [Drosophila simulans]
Length = 413
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 261 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 314
>gi|188504136|gb|ACD56186.1| FTZ [Drosophila simulans]
gi|188504138|gb|ACD56187.1| FTZ [Drosophila simulans]
Length = 413
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 261 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 314
>gi|384940632|gb|AFI33921.1| homeobox protein Hox-D4 [Macaca mulatta]
gi|387540532|gb|AFJ70893.1| homeobox protein Hox-D4 [Macaca mulatta]
Length = 255
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|114644452|ref|XP_522410.2| PREDICTED: uncharacterized protein LOC467010 [Pan troglodytes]
Length = 522
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK---QLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K RK + +
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKGRKIQNEKQ 218
Query: 66 KREEVVIKDPSKDLF 80
KR + + P+ F
Sbjct: 219 KRFSLAFRIPTDPGF 233
>gi|119370792|sp|Q1KKU6.1|HXC4A_FUGRU RecName: Full=Homeobox protein Hox-C4a
gi|94482832|gb|ABF22448.1| homeobox protein HoxC4a [Takifugu rubripes]
Length = 264
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 159 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHALVLSERQIKIWFQNRRMKWKK 212
>gi|348585693|ref|XP_003478605.1| PREDICTED: homeobox protein Hox-D4-like [Cavia porcellus]
Length = 254
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 157 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 213
>gi|213511094|ref|NP_001135140.1| homeobox protein HoxC4bb [Salmo salar]
gi|157816001|gb|ABV82019.1| homeobox protein HoxC4bb [Salmo salar]
gi|158702360|gb|ABW77548.1| homeobox protein HoxC4bb [Salmo salar]
Length = 276
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 213
>gi|195344083|ref|XP_002038618.1| ftz [Drosophila sechellia]
gi|188504144|gb|ACD56190.1| FTZ [Drosophila sechellia]
gi|194133639|gb|EDW55155.1| ftz [Drosophila sechellia]
Length = 413
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 261 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 314
>gi|164430215|gb|ABY55435.1| ftz [Drosophila mauritiana]
Length = 412
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 260 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 313
>gi|255755643|dbj|BAH96547.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 278
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQVKIWFQNRR K +K
Sbjct: 191 RTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHALGLTERQVKIWFQNRRMKWKK 244
>gi|164430217|gb|ABY55436.1| ftz [Drosophila mauritiana]
Length = 412
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 260 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 313
>gi|1791005|gb|AAB41222.1| homeodomain-containing transcription factor [Mus musculus]
gi|148695229|gb|EDL27176.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|148695230|gb|EDL27177.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|223460739|gb|AAI39208.1| Hoxd4 protein [Mus musculus]
gi|223461092|gb|AAI39207.1| Hoxd4 protein [Mus musculus]
Length = 250
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|321475846|gb|EFX86808.1| putative homrotic deformed protein [Daphnia pulex]
Length = 469
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 337 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 390
>gi|195568832|ref|XP_002102416.1| ftz [Drosophila simulans]
gi|194198343|gb|EDX11919.1| ftz [Drosophila simulans]
Length = 413
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 261 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 314
>gi|195344053|ref|XP_002038605.1| GM10530 [Drosophila sechellia]
gi|194133626|gb|EDW55142.1| GM10530 [Drosophila sechellia]
Length = 833
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 247 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 306
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 307 KTDDEDNKDSLK 318
>gi|187608357|ref|NP_001119917.1| homeobox protein Hox-D4a [Danio rerio]
gi|190337184|gb|AAI62966.1| Homeo box D4a [Danio rerio]
gi|190338908|gb|AAI62983.1| Homeo box D4a [Danio rerio]
gi|190339776|gb|AAI63059.1| Hoxd4a protein [Danio rerio]
Length = 256
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 170 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 226
>gi|7986|emb|CAA25408.1| ftz protein [Drosophila melanogaster]
Length = 413
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 261 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 314
>gi|332209405|ref|XP_003253802.1| PREDICTED: homeobox protein Hox-D4 [Nomascus leucogenys]
Length = 255
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|121308835|dbj|BAF43724.1| transcription factor Hox5 [Metacrinus rotundus]
Length = 180
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+
Sbjct: 101 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKE 155
>gi|125858467|ref|NP_001075038.1| homeobox protein Hox-D4 [Pan troglodytes]
gi|397489129|ref|XP_003815587.1| PREDICTED: homeobox protein Hox-D4 [Pan paniscus]
gi|146324936|sp|A1YFY3.1|HXD4_PANPA RecName: Full=Homeobox protein Hox-D4
gi|146324937|sp|A2T6X6.1|HXD4_PANTR RecName: Full=Homeobox protein Hox-D4
gi|121483828|gb|ABM54208.1| HOXD4 [Pan paniscus]
gi|124111109|gb|ABM91931.1| HOXD4 [Pan troglodytes]
gi|410218854|gb|JAA06646.1| homeobox D4 [Pan troglodytes]
Length = 255
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|432933125|ref|XP_004081817.1| PREDICTED: homeobox protein Hox-D4a-like [Oryzias latipes]
Length = 256
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 170 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 226
>gi|164430223|gb|ABY55439.1| ftz [Drosophila mauritiana]
Length = 413
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 261 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 314
>gi|395540398|ref|XP_003772142.1| PREDICTED: homeobox protein Hox-A4 [Sarcophilus harrisii]
Length = 118
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 19 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 75
>gi|340727745|ref|XP_003402197.1| PREDICTED: hypothetical protein LOC100643103 [Bombus terrestris]
Length = 640
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q
Sbjct: 37 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 96
Query: 67 REEVVIKDPS 76
+E+ KD S
Sbjct: 97 KEDGDEKDGS 106
>gi|311272691|ref|XP_003133546.1| PREDICTED: homeobox protein Hox-D4-like [Sus scrofa]
Length = 257
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 159 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 215
>gi|431894935|gb|ELK04728.1| Homeobox protein Hox-D4 [Pteropus alecto]
Length = 253
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|17137784|ref|NP_477498.1| fushi tarazu [Drosophila melanogaster]
gi|25453437|sp|P02835.2|FTZ_DROME RecName: Full=Segmentation protein fushi tarazu
gi|4389424|gb|AAD19794.1| segmentation gene [Drosophila melanogaster]
gi|7298874|gb|AAF54081.1| fushi tarazu [Drosophila melanogaster]
gi|66571204|gb|AAY51567.1| IP01266p [Drosophila melanogaster]
gi|220943404|gb|ACL84245.1| ftz-PA [synthetic construct]
gi|220953312|gb|ACL89199.1| ftz-PA [synthetic construct]
Length = 410
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 258 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
>gi|226434229|gb|ACO56222.1| hoxd4b, partial [Oreochromis niloticus]
Length = 115
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH+SRY+T RR+ E+A++L LSERQVK+WFQNRR + +K
Sbjct: 29 RTAYTRQQVLELEKEFHFSRYLTRRRRVEVAHALCLSERQVKVWFQNRRMRWKK 82
>gi|154183857|gb|ABS70795.1| Hoxd4a [Haplochromis burtoni]
Length = 235
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|403258699|ref|XP_003921888.1| PREDICTED: homeobox protein Hox-D4 [Saimiri boliviensis
boliviensis]
Length = 255
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|299115100|dbj|BAJ09781.1| homeotic protein deformed [Daphnia magna]
Length = 461
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 329 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 382
>gi|296652|emb|CAA35237.1| hox 5.1 protein [Homo sapiens]
gi|189067017|dbj|BAG36610.1| unnamed protein product [Homo sapiens]
gi|208968521|dbj|BAG74099.1| homeobox D4 [synthetic construct]
Length = 255
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|426337801|ref|XP_004032885.1| PREDICTED: homeobox protein Hox-D4 [Gorilla gorilla gorilla]
gi|146324934|sp|A1YER7.1|HXD4_GORGO RecName: Full=Homeobox protein Hox-D4
gi|120974087|gb|ABM46635.1| HOXD4 [Gorilla gorilla]
Length = 255
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|63259070|gb|AAD46174.2|AF151671_1 Lox5 homeobox protein [Alitta virens]
Length = 132
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ Q LELEKEFHY+RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+
Sbjct: 9 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKE 63
>gi|339245065|ref|XP_003378458.1| homeobox protein Hox-A7 [Trichinella spiralis]
gi|316972631|gb|EFV56297.1| homeobox protein Hox-A7 [Trichinella spiralis]
Length = 108
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 49/72 (68%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R YS Q LELEKEFH++RY+T RR+ E+A L L+ERQVKIWFQNRR K +K+ K
Sbjct: 36 RQTYSRNQTLELEKEFHFNRYLTRRRRQEIAAELCLTERQVKIWFQNRRMKWKKENKISV 95
Query: 69 EVVIKDPSKDLF 80
E KDLF
Sbjct: 96 EPADSSTEKDLF 107
>gi|220898180|gb|ACL81436.1| HoxA4 [Latimeria menadoensis]
Length = 237
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 144 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 200
>gi|126326351|ref|XP_001368596.1| PREDICTED: homeobox protein Hox-D4-like [Monodelphis domestica]
Length = 238
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|449266232|gb|EMC77311.1| Homeobox protein Hox-D4 [Columba livia]
Length = 237
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|387231065|gb|AFJ72243.1| homeobox A4, partial [Neophocaena phocaenoides]
Length = 115
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 12 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 68
>gi|213513916|ref|NP_001135094.1| homeobox protein HoxC6bb [Salmo salar]
gi|157815997|gb|ABV82017.1| homeobox protein HoxC6bb [Salmo salar]
gi|158702358|gb|ABW77546.1| homeobox protein HoxC6bb [Salmo salar]
Length = 232
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLSERQIKIWFQNRRMKWKKE 199
>gi|31323433|gb|AAP47018.1| HOX6/7 [Diplosoma listerianum]
Length = 126
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R YS Q LELEKEFHY+RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +++ K
Sbjct: 16 RQTYSRYQTLELEKEFHYNRYLTRRRRIEIANALCLSERQIKIWFQNRRMKWKRENK 72
>gi|387231061|gb|AFJ72241.1| homeobox A4, partial [Aselliscus stoliczkanus]
Length = 114
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|23397672|ref|NP_055436.2| homeobox protein Hox-D4 [Homo sapiens]
gi|20141491|sp|P09016.3|HXD4_HUMAN RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein HHO.C13; AltName: Full=Homeobox protein Hox-4B;
AltName: Full=Homeobox protein Hox-5.1
gi|16876979|gb|AAH16763.1| Homeobox D4 [Homo sapiens]
gi|49904755|gb|AAH74797.1| Homeobox D4 [Homo sapiens]
gi|119631491|gb|EAX11086.1| homeobox D4 [Homo sapiens]
Length = 255
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|410896924|ref|XP_003961949.1| PREDICTED: homeobox protein Hox-D4a-like [Takifugu rubripes]
Length = 274
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 190 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 246
>gi|224055148|ref|XP_002199292.1| PREDICTED: homeobox protein Hox-D4 [Taeniopygia guttata]
Length = 237
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|32367|emb|CAA28411.1| unnamed protein product [Homo sapiens]
gi|225392|prf||1301323A gene homeobox
Length = 255
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>gi|326921913|ref|XP_003207198.1| PREDICTED: homeobox protein Hox-A4-like, partial [Meleagris
gallopavo]
Length = 134
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 38 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 94
>gi|431822413|ref|NP_001012293.1| homeobox protein Hox-D4 [Gallus gallus]
Length = 237
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|410900826|ref|XP_003963897.1| PREDICTED: homeobox protein Hox-D4b-like [Takifugu rubripes]
gi|119370800|sp|Q1KKR6.1|HXD4B_FUGRU RecName: Full=Homeobox protein Hox-D4b
gi|94482864|gb|ABF22478.1| homeobox protein HoxD4b [Takifugu rubripes]
Length = 249
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH+SRY+T RR+ E+A++L LSERQVK+WFQNRR + +K K
Sbjct: 160 RTAYTRQQVLELEKEFHFSRYLTRRRRVEVAHTLCLSERQVKVWFQNRRMRWKKDHK 216
>gi|155371905|ref|NP_001094557.1| homeobox protein Hox-D4 [Bos taurus]
gi|154425967|gb|AAI51500.1| HOXD4 protein [Bos taurus]
gi|296490701|tpg|DAA32814.1| TPA: homeobox D4 [Bos taurus]
Length = 258
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 161 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 217
>gi|1574930|gb|AAB09406.1| HEHBOX9, partial [Heliocidaris erythrogramma]
Length = 90
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ--LKK 66
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+ +K
Sbjct: 6 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKEHNVKS 65
Query: 67 REEVVIKDPSKDL 79
+++ ++ + +L
Sbjct: 66 ISQLISQEAAANL 78
>gi|387231059|gb|AFJ72240.1| homeobox A4, partial [Nyctalus noctula]
Length = 119
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|157278493|ref|NP_001098348.1| homeobox protein Hox-C4 [Oryzias latipes]
gi|21263751|sp|Q9PVS4.1|HXC4_ORYLA RecName: Full=Homeobox protein Hox-C4
gi|6274504|dbj|BAA86238.1| HOXC4A [Oryzias latipes]
Length = 261
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 158 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 211
>gi|195446481|ref|XP_002070800.1| GK10831 [Drosophila willistoni]
gi|194166885|gb|EDW81786.1| GK10831 [Drosophila willistoni]
Length = 816
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 199 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 258
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 259 KTDDEDNKDSLK 270
>gi|165873661|gb|ABY67955.1| deformed hox protein [Capitella teleta]
Length = 180
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K+ K
Sbjct: 78 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKEHK 134
>gi|194899153|ref|XP_001979125.1| ftz [Drosophila erecta]
gi|190650828|gb|EDV48083.1| ftz [Drosophila erecta]
Length = 420
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 264 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 317
>gi|259013408|ref|NP_001158411.1| homeobox 6 [Saccoglossus kowalevskii]
gi|116574504|gb|ABK00020.1| hox 6 [Saccoglossus kowalevskii]
Length = 242
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K K+E
Sbjct: 152 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLGLTERQIKIWFQNRRMK-----WKKE 206
Query: 69 EVVIKDPSKDLFLSNKV 85
+ PS F S++
Sbjct: 207 QKTGGAPSPKQFASSQT 223
>gi|301128902|emb|CBL59364.1| HoxD4 [Scyliorhinus canicula]
Length = 240
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|350410204|ref|XP_003488979.1| PREDICTED: hypothetical protein LOC100748643 [Bombus impatiens]
Length = 635
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q
Sbjct: 29 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 88
Query: 67 REEVVIKDPS 76
+E+ KD S
Sbjct: 89 KEDGDEKDGS 98
>gi|348501658|ref|XP_003438386.1| PREDICTED: homeobox protein Hox-D4b [Oreochromis niloticus]
Length = 248
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH+SRY+T RR+ E+A++L LSERQVK+WFQNRR + +K
Sbjct: 159 RTAYTRQQVLELEKEFHFSRYLTRRRRVEVAHALCLSERQVKVWFQNRRMRWKK 212
>gi|154183862|gb|ABS70799.1| Hox4b [Haplochromis burtoni]
Length = 250
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH+SRY+T RR+ E+A++L LSERQVK+WFQNRR + +K
Sbjct: 159 RTAYTRQQVLELEKEFHFSRYLTRRRRVEVAHALCLSERQVKVWFQNRRMRWKK 212
>gi|387231041|gb|AFJ72231.1| homeobox A4, partial [Miniopterus schreibersii]
Length = 116
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|354472313|ref|XP_003498384.1| PREDICTED: homeobox protein Hox-A4-like [Cricetulus griseus]
Length = 213
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 71 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 127
>gi|348519803|ref|XP_003447419.1| PREDICTED: homeobox protein Hox-D4a [Oreochromis niloticus]
Length = 265
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 180 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 236
>gi|270341324|gb|AAS07615.2| labial homeodomain protein 2 [Perionyx excavatus]
Length = 342
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T + R ++++Q ELEKEFH++RY+T R+ E+A+SLGL+E QVKIWFQNRR K++K+
Sbjct: 186 TPNLGRTNFTNKQLTELEKEFHFNRYLTRARRIEIASSLGLNETQVKIWFQNRRMKQKKR 245
Query: 64 LKK 66
+K+
Sbjct: 246 MKE 248
>gi|387231057|gb|AFJ72239.1| homeobox A4, partial [Chaerephon plicatus]
Length = 118
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|220898216|gb|ACL81469.1| HoxD4 [Latimeria menadoensis]
Length = 233
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 147 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 203
>gi|27374238|gb|AAO00998.1| ftz-PA [Drosophila erecta]
Length = 422
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 266 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 319
>gi|47224728|emb|CAG00322.1| unnamed protein product [Tetraodon nigroviridis]
Length = 252
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH+SRY+T RR+ E+A++L LSERQVK+WFQNRR + +K
Sbjct: 154 RTAYTRQQVLELEKEFHFSRYLTRRRRVEVAHTLCLSERQVKVWFQNRRMRWKK 207
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 32/185 (17%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
K R Y+ Q LELEKEF Y+ Y+T R+ E+A L L+ERQ F +R + +
Sbjct: 14 KKRCPYTKHQTLELEKEFLYNMYLTRDRRLEVAGLLNLTERQNPHSFGHRGLETAPAICG 73
Query: 67 REEVVIKDPSKDLFLSNKVMYTYLVFQVKIWFQNRRAK--ERK---QLKKREEVVIKDPS 121
+ +D + K Y+ + Q + W ++ +RK Q K + VV+
Sbjct: 74 EQPAAAFRGYRDAGEAGKQGYSTVDLQCQAWMTCAKSAQVQRKAVCQGKDKPPVVVYPWM 133
Query: 122 KDLFLSNKVMIRKISVSPPFSFRSSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELE 181
K KV + +++ + P + R Y+ QQ LELE
Sbjct: 134 K------KVHVAQVNPNHPGP---------------------EPKRLRTAYTRQQVLELE 166
Query: 182 KEFHY 186
KEFH+
Sbjct: 167 KEFHF 171
>gi|1346304|sp|P48590.1|FTZ_DROHY RecName: Full=Segmentation protein fushi tarazu
gi|496879|emb|CAA56039.1| ftz [Drosophila hydei]
Length = 456
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R YS Q LELEKEFH++RYIT RR+ ++A++L LSERQ+KIWFQNRR K +K
Sbjct: 287 RQTYSRYQTLELEKEFHFNRYITRRRRMDIAHALNLSERQIKIWFQNRRMKSKK 340
>gi|327283057|ref|XP_003226258.1| PREDICTED: homeobox protein Hox-D4-like [Anolis carolinensis]
Length = 244
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 212
>gi|45775262|gb|AAS77228.1| Hox class homeodomain-containing protein Dfdb, partial [Bugula
turrita]
Length = 76
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 9 RTAYTRQQVLELEKEFHYNRYLTQRRRIEIAHTLTLSERQIKIWFQNRRMKWKKDHK 65
>gi|312125849|gb|ADQ27868.1| fushi tarazu [Pedetontus saltator]
Length = 134
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A+ LGL+ERQ+KIWFQNRR K +K+ K +E
Sbjct: 28 RQTYTRVQTLELEKEFHFNRYLTRRRRIEIAHVLGLTERQIKIWFQNRRMKAKKESKLQE 87
>gi|34484440|gb|AAQ72842.1| HoxD4b [Sphoeroides nephelus]
Length = 257
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH+SRY+T RR+ E+A++L LSERQVK+WFQNRR + +K K
Sbjct: 160 RTAYTRQQVLELEKEFHFSRYLTRRRRVEVAHTLCLSERQVKVWFQNRRMRWKKDNK 216
>gi|74267559|dbj|BAE44278.1| hoxC4a [Oryzias latipes]
gi|83016963|dbj|BAE53486.1| hoxC4a [Oryzias latipes]
Length = 266
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 163 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 216
>gi|432901832|ref|XP_004076969.1| PREDICTED: homeobox protein Hox-D4b-like [Oryzias latipes]
gi|74267589|dbj|BAE44293.1| hoxD4b [Oryzias latipes]
gi|83016986|dbj|BAE53503.1| hoxD4b [Oryzias latipes]
Length = 245
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH+SRY+T RR+ E+A++L LSERQVK+WFQNRR + +K K
Sbjct: 157 RTAYTRQQVLELEKEFHFSRYLTRRRRVEVAHALCLSERQVKVWFQNRRMRWKKDNK 213
>gi|2765089|emb|CAA71835.1| Lox7 [Helobdella triserialis]
Length = 164
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R ++++Q ELEKEFH+++Y+T R+ E+A++LGL+E QVKIWFQNRR K +K+LK+
Sbjct: 45 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASTLGLNETQVKIWFQNRRMKHKKRLKESN 104
Query: 69 EVV 71
V+
Sbjct: 105 NVI 107
>gi|28629625|gb|AAO43018.1| HoxA4 [Latimeria menadoensis]
Length = 106
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 69
>gi|47228654|emb|CAG07386.1| unnamed protein product [Tetraodon nigroviridis]
Length = 482
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 376 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHALVLSERQIKIWFQNRRMKWKK 429
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY++ RR+ E+A++L L+ERQ+KIWFQNRR K KK
Sbjct: 67 RTSYTRYQTLELEKEFHFNRYLSRRRRIEIAHNLCLNERQIKIWFQNRRMK----WKKDS 122
Query: 69 EVVIKD 74
++ +KD
Sbjct: 123 KIKVKD 128
>gi|355750647|gb|EHH54974.1| hypothetical protein EGM_04092 [Macaca fascicularis]
Length = 195
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 98 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 154
>gi|291391794|ref|XP_002712254.1| PREDICTED: homeobox D3 [Oryctolagus cuniculus]
Length = 2096
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 44/61 (72%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K
Sbjct: 956 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKA 1015
Query: 67 R 67
+
Sbjct: 1016 K 1016
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R +S +Q ELEKEFH+++Y+T R+ E+AN L L++ QVKIWFQNRR K++K ++RE
Sbjct: 2008 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKK--RERE 2065
Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 37/45 (82%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKI 51
+ R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KI
Sbjct: 138 RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKI 182
>gi|38016603|gb|AAR07635.1| transcription factor Hox4 [Ptychodera flava]
Length = 275
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQVKIWFQNRR K +K
Sbjct: 189 RTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHALGLTERQVKIWFQNRRMKWKK 242
>gi|66476110|gb|AAX63761.2| HoxC4bii [Oncorhynchus mykiss]
Length = 208
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K
Sbjct: 158 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMK 208
>gi|359323907|ref|XP_003640225.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D4 [Canis
lupus familiaris]
Length = 249
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|262263017|gb|ACY39977.1| HoxD4 [Heterodontus francisci]
Length = 238
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 149 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 205
>gi|195389717|ref|XP_002053521.1| GJ23937 [Drosophila virilis]
gi|194151607|gb|EDW67041.1| GJ23937 [Drosophila virilis]
Length = 780
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 175 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 234
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 235 KTDDEDNKDSLK 246
>gi|58382029|ref|XP_311618.2| AGAP004660-PA [Anopheles gambiae str. PEST]
gi|3420836|gb|AAC31945.1| Antennapedia homeotic protein [Anopheles gambiae]
gi|55242653|gb|EAA07256.2| AGAP004660-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 248 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 307
Query: 69 EVVIKD 74
E D
Sbjct: 308 EPGSGD 313
>gi|426220827|ref|XP_004004613.1| PREDICTED: homeobox protein Hox-D4 [Ovis aries]
Length = 271
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 172 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 228
>gi|410968902|ref|XP_003990938.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D4 [Felis
catus]
Length = 250
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 207
>gi|339241423|ref|XP_003376637.1| homeotic protein labial [Trichinella spiralis]
gi|316974634|gb|EFV58118.1| homeotic protein labial [Trichinella spiralis]
Length = 218
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R ++ +Q ELEKEFH +RY+T R+ E+A+ LGL+E QVKIWFQNRR K++K LK++
Sbjct: 69 RTNFTTKQLTELEKEFHTNRYLTRARRIEIASQLGLNETQVKIWFQNRRMKQKKHLKEKG 128
Query: 69 EVVIKDPSKDLFLSNKVMYTYLVF 92
++ PS LS+ V + + +F
Sbjct: 129 FTLM--PSA---LSSSVCWAFSIF 147
>gi|195451407|ref|XP_002072904.1| GK13853 [Drosophila willistoni]
gi|194168989|gb|EDW83890.1| GK13853 [Drosophila willistoni]
Length = 582
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 389 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 448
Query: 69 EV 70
E+
Sbjct: 449 EI 450
>gi|328700892|ref|XP_001945225.2| PREDICTED: hypothetical protein LOC100169134 [Acyrthosiphon pisum]
Length = 905
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
+ R Y++ Q LELEKEFH+S+Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q
Sbjct: 211 RLRTAYTNTQLLELEKEFHFSKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 267
>gi|14010303|gb|AAK51942.1|AF362087_1 deformed [Lithobius forficatus]
Length = 94
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 14 RTAYTRQQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 67
>gi|355564997|gb|EHH21486.1| hypothetical protein EGK_04566 [Macaca mulatta]
Length = 192
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 95 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 151
>gi|387625231|gb|AFJ94202.1| Hox1a homeobox protein [Pristina longiseta]
Length = 232
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 49/61 (80%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R ++++Q ELEKEFH++RY+T R+ E+A SLGL+E QVKIWFQNRR K++K+LK
Sbjct: 92 NGGRTNFTNKQLTELEKEFHFNRYLTRARRIEIAASLGLNETQVKIWFQNRRMKQKKRLK 151
Query: 66 K 66
+
Sbjct: 152 E 152
>gi|444723480|gb|ELW64135.1| Homeobox protein Hox-D4 [Tupaia chinensis]
Length = 252
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 154 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 210
>gi|358334415|dbj|GAA52858.1| homeotic protein labial, partial [Clonorchis sinensis]
Length = 678
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R+ ++++Q ELEKEFH++RY+T R+ E+AN LGL+E QVKIWFQNRR K++K+++ +
Sbjct: 583 RINFTNKQLTELEKEFHFNRYLTRARRIEIANDLGLTETQVKIWFQNRRMKQKKRMRDQW 642
Query: 69 EVVIKDPSKDLFLSNKVMYTYLVFQVK 95
V K S+D + V ++ Q+K
Sbjct: 643 FGVPKT-SEDPVFESSVRRPHIQTQIK 668
>gi|4760770|dbj|BAA77404.1| PLOX4-Dj [Dugesia japonica]
Length = 184
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LKKR 67
R YS QQ LELEKEF+Y++Y+T RR+ E+ANS+ LSERQ+KIWFQNRR K +K L K
Sbjct: 120 RQAYSRQQTLELEKEFYYNQYLTRRRRIEIANSVCLSERQIKIWFQNRRMKYKKDVLSKN 179
Query: 68 EE 69
E
Sbjct: 180 HE 181
>gi|255742477|gb|ACU32589.1| homeobox protein HoxD4 [Callorhinchus milii]
Length = 238
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 206
>gi|157124729|ref|XP_001660496.1| homeotic antennapedia protein, putative [Aedes aegypti]
gi|108873900|gb|EAT38125.1| AAEL009947-PA [Aedes aegypti]
Length = 325
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 249 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 308
Query: 69 EVVIKD 74
E D
Sbjct: 309 EPGSGD 314
>gi|3581948|emb|CAA64697.1| homeodomain protein [Girardia tigrina]
Length = 188
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQL 64
R YS QQ LELEKEF+Y++Y+T RR+ E+ANS+ LSERQ+KIWFQNRR K +K +
Sbjct: 124 RQAYSRQQTLELEKEFYYNQYLTRRRRIEIANSVCLSERQIKIWFQNRRMKYKKDV 179
>gi|170029597|ref|XP_001842678.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167863997|gb|EDS27380.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 331
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 255 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 314
Query: 69 EVVIKD 74
E D
Sbjct: 315 EPGSGD 320
>gi|156551123|ref|XP_001603670.1| PREDICTED: hypothetical protein LOC100110062 [Nasonia vitripennis]
Length = 448
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH+ RY++ +R+ E+A+SLGL+ERQ+KIWFQNRR K +K K
Sbjct: 276 RQTYTRYQTLELEKEFHFCRYLSRKRRVEIAHSLGLTERQIKIWFQNRRMKAKKDSK 332
>gi|194742012|ref|XP_001953503.1| GF17190 [Drosophila ananassae]
gi|190626540|gb|EDV42064.1| GF17190 [Drosophila ananassae]
Length = 430
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 270 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 323
>gi|432107307|gb|ELK32721.1| Homeobox protein Hox-D4 [Myotis davidii]
Length = 166
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 71 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 127
>gi|123298|sp|P17278.1|HXD4_CHICK RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-A; Short=Chox-A
Length = 235
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 148 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 204
>gi|121308920|dbj|BAF43725.1| transcription factor Hox7 [Metacrinus rotundus]
Length = 256
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R Y+ Q LELEKEFH++RY+T RR+ EL++ LGL+ERQ+KIWFQNRR K +K+ KK
Sbjct: 164 RQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKENKK 221
>gi|195110411|ref|XP_001999775.1| GI24714 [Drosophila mojavensis]
gi|193916369|gb|EDW15236.1| GI24714 [Drosophila mojavensis]
Length = 454
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R YS Q LELEKEFH++RYIT RR+ ++A++L LSERQ+KIWFQNRR K +K
Sbjct: 270 RQTYSRYQTLELEKEFHFNRYITRRRRMDIAHALNLSERQIKIWFQNRRMKSKK 323
>gi|45775264|gb|AAS77229.1| Hox class homeodomain-containing protein Lox5, partial [Bugula
turrita]
Length = 71
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ Q LELEKEFHY+RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+
Sbjct: 9 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLGLTERQIKIWFQNRRMKWKKE 63
>gi|20339631|gb|AAM19469.1|AF410911_1 HoxG4 homeobox [Petromyzon marinus]
Length = 60
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 5 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 58
>gi|301787253|ref|XP_002929043.1| PREDICTED: homeobox protein Hox-D4-like [Ailuropoda melanoleuca]
Length = 182
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 83 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 139
>gi|291389286|ref|XP_002711077.1| PREDICTED: homeobox C9-like [Oryctolagus cuniculus]
Length = 463
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 373 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 427
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R YS Q LELEKEF ++ Y+T +R+ E++++LGL+ERQVKIWFQNRR K +K+ K
Sbjct: 187 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 244
>gi|443689506|gb|ELT91880.1| hypothetical protein CAPTEDRAFT_149640 [Capitella teleta]
Length = 254
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K+ K
Sbjct: 152 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKEHK 208
>gi|112983708|ref|NP_001037319.1| antennapedia homologue protein [Bombyx mori]
gi|391615|dbj|BAA04087.1| Antennapedia homologue protein [Bombyx mori]
gi|426204115|gb|AFY12623.1| antennapedia-like protein [Bombyx mori]
Length = 259
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 182 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 241
Query: 69 EVVIKD 74
E D
Sbjct: 242 EPGSGD 247
>gi|27374332|gb|AAO01076.1| ftz-PA [Drosophila virilis]
Length = 465
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R YS Q LELEKEFH++RYIT RR+ ++A++L LSERQ+KIWFQNRR K +K
Sbjct: 292 RQTYSRYQTLELEKEFHFNRYITRRRRMDIAHALNLSERQIKIWFQNRRMKSKK 345
>gi|306965454|emb|CBK55568.1| antennapedia [Glomeris marginata]
Length = 201
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 3 RTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R + + R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K
Sbjct: 122 RKRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 181
Query: 63 QLKKREEVVIKDPS 76
+ K + E + DP+
Sbjct: 182 ENKAKIEAGV-DPN 194
>gi|255742476|gb|ACU32588.1| homeobox protein HoxD5 [Callorhinchus milii]
Length = 249
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K K +
Sbjct: 178 RTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD-NKLK 236
Query: 69 EVVIKDPSKDL 79
+ I P
Sbjct: 237 SISITPPGGGF 247
>gi|121503158|gb|ABM55127.1| HOXD4 [Macaca mulatta]
gi|124013521|gb|ABM88005.1| HOXD4 [Macaca nemestrina]
Length = 110
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 69
>gi|312384141|gb|EFR28940.1| hypothetical protein AND_02489 [Anopheles darlingi]
Length = 322
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 246 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 305
Query: 69 EVVIKD 74
E D
Sbjct: 306 EPGSGD 311
>gi|195389694|ref|XP_002053511.1| GJ23928 [Drosophila virilis]
gi|194151597|gb|EDW67031.1| GJ23928 [Drosophila virilis]
Length = 464
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R YS Q LELEKEFH++RYIT RR+ ++A++L LSERQ+KIWFQNRR K +K
Sbjct: 291 RQTYSRYQTLELEKEFHFNRYITRRRRMDIAHALNLSERQIKIWFQNRRMKSKK 344
>gi|157816015|gb|ABV82026.1| homeobox protein HoxD4aa [Salmo salar]
gi|158702368|gb|ABW77555.1| homeobox protein HoxD4aa [Salmo salar]
Length = 236
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHK 206
>gi|255755647|dbj|BAH96549.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 243
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 12/80 (15%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK--- 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+ K
Sbjct: 156 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKEQKVGD 215
Query: 66 ---------KREEVVIKDPS 76
K + V DPS
Sbjct: 216 SKAPFDEHQKPQHVNGGDPS 235
>gi|259013356|ref|NP_001158385.1| homeobox 4 [Saccoglossus kowalevskii]
gi|32307801|gb|AAP79297.1| hox4 [Saccoglossus kowalevskii]
Length = 274
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K
Sbjct: 188 RTAYTRYQVLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKK 241
>gi|18026214|gb|AAL25808.1| Lox5 homeodomain protein [Euprymna scolopes]
Length = 100
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ Q LELEKEFH++RY+T RR+ E+A+SLGLSERQ+KIWFQNRR K +K+
Sbjct: 24 RQTYTRFQTLELEKEFHFNRYLTRRRRIEIAHSLGLSERQIKIWFQNRRMKWKKE 78
>gi|1334709|emb|CAA36898.1| unnamed protein product [Gallus gallus]
Length = 225
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 138 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 194
>gi|410934531|gb|AFV93982.1| homeodomain-containing protein Hox8, partial [Branchiostoma
lanceolatum]
Length = 199
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R YS Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+
Sbjct: 126 RQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKLKKE 180
>gi|317416880|emb|CBH40216.1| hox Cdx-4 homeobox protein [Ostrea edulis]
Length = 45
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 39/44 (88%)
Query: 16 QRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
Q LELEKEF YSRYITIRRKAELA +L LSERQ+KIWFQNRR K
Sbjct: 2 QTLELEKEFLYSRYITIRRKAELAQTLALSERQMKIWFQNRRMK 45
>gi|27525473|emb|CAD59669.1| putative homeobox protein 4 [Ciona intestinalis]
Length = 193
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 47/71 (66%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY+RY+T RR+ E+A L LSERQVKIWFQNRR K +K K
Sbjct: 113 RTAYTRHQVLELEKEFHYNRYLTRRRRIEIALGLCLSERQVKIWFQNRRMKWKKDHKLPN 172
Query: 69 EVVIKDPSKDL 79
V P+ L
Sbjct: 173 TKVRNPPTSSL 183
>gi|309951537|gb|ADO95194.1| antennapedia-like protein [Rhodnius prolixus]
Length = 77
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 60
Query: 69 EVVIKDPS 76
++ D S
Sbjct: 61 DIGANDGS 68
>gi|193926|gb|AAA37841.1| homeobox protein, partial [Mus musculus]
Length = 85
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 14 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 70
>gi|119370799|sp|Q1KKS8.1|HXD4A_FUGRU RecName: Full=Homeobox protein Hox-D4a
gi|94482851|gb|ABF22466.1| homeobox protein HoxD4a [Takifugu rubripes]
Length = 233
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K K K
Sbjct: 149 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWTKDHK 205
>gi|339241427|ref|XP_003376639.1| homeotic protein deformed [Trichinella spiralis]
gi|316974632|gb|EFV58116.1| homeotic protein deformed [Trichinella spiralis]
Length = 321
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+++Q +ELEKEFH+SRY++ R+ ELA SL LSERQ+KIWFQNRR K +K + R+
Sbjct: 33 RTAYTNRQLVELEKEFHFSRYLSKPRRQELAESLSLSERQIKIWFQNRRMKMKKDERNRK 92
Query: 69 EVV 71
Sbjct: 93 STA 95
>gi|395830950|ref|XP_003788575.1| PREDICTED: homeobox protein Hox-A7 [Otolemur garnettii]
gi|202070729|gb|ACH95317.1| homeobox A7 (predicted) [Otolemur garnettii]
Length = 226
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K+
Sbjct: 134 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEEG 193
Query: 69 EVVIKDP 75
+ P
Sbjct: 194 PAAPEGP 200
>gi|443689507|gb|ELT91881.1| hypothetical protein CAPTEDRAFT_168122 [Capitella teleta]
Length = 298
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL L+ERQ+KIWFQNRR K +K+ K
Sbjct: 209 RTSYTRHQTLELEKEFHFNRYLTRRRRIEIAHSLNLTERQIKIWFQNRRMKWKKEHK 265
>gi|449268331|gb|EMC79200.1| Homeobox protein Hox-A4, partial [Columba livia]
Length = 71
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K
Sbjct: 4 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 57
>gi|387232147|gb|AFJ72784.1| homeobox D4, partial [Rhinolophus affinis]
Length = 109
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 69
>gi|383849605|ref|XP_003700435.1| PREDICTED: homeotic protein antennapedia-like [Megachile rotundata]
Length = 352
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 274 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 333
Query: 69 EVVIKD 74
E D
Sbjct: 334 EPGSGD 339
>gi|213514998|ref|NP_001134844.1| Homeobox protein Hox-D4a [Salmo salar]
gi|209736512|gb|ACI69125.1| Homeobox protein Hox-D4a [Salmo salar]
Length = 256
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 170 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHK 226
>gi|387232143|gb|AFJ72782.1| homeobox D4, partial [Rousettus leschenaultii]
Length = 109
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 12 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 68
>gi|387232129|gb|AFJ72775.1| homeobox D4, partial [Cynopterus sphinx]
Length = 108
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 11 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 67
>gi|387232115|gb|AFJ72768.1| homeobox D4, partial [Myotis ricketti]
Length = 108
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 12 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 68
>gi|47228655|emb|CAG07387.1| unnamed protein product [Tetraodon nigroviridis]
Length = 467
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 375 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 429
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 57/219 (26%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R YS Q LELEKEF ++ Y+T +R+ E++++L L+ERQVKIWFQNRR K +K+ K +
Sbjct: 190 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKKENNKDK 249
Query: 69 EVVIKDP-----------------SKDLFLSNKVMYTYLVFQVKIWFQNRRAKERKQLKK 111
P D N++ + Q + F + RA Q
Sbjct: 250 ---FPGPRGEAEAEEEGNEDAAALDHDRVALNRIYAPFYSPQDNVVFGSGRA----QYDY 302
Query: 112 REEVVIKD----PS---KDLFLSNKVMIRK-----------------ISVSPPFSFRSSE 147
V ++D PS ++ LS + I + I + P+ R +
Sbjct: 303 GSNVFLQDKDVLPSCRQTNMGLSTQSHIAQEYSLDQGRTATQEQKSNIPIY-PWMQRMNS 361
Query: 148 TTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ Y D + + R +YS Q LELEKEFH+
Sbjct: 362 HSGVGYGTD--------RRRGRQIYSRYQTLELEKEFHF 392
>gi|195498941|ref|XP_002096738.1| GE25834 [Drosophila yakuba]
gi|194182839|gb|EDW96450.1| GE25834 [Drosophila yakuba]
Length = 784
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 195 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 254
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 255 KTDDEDNKDSLK 266
>gi|385654517|gb|AFI62013.1| Hox-C5b [Anguilla japonica]
Length = 240
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK--QLKK 66
R Y+ Q LELEKEFH++RY+T RR+ E+ANSL L+ERQ+KIWFQNRR K +K ++K
Sbjct: 177 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQIKIWFQNRRMKWKKDSKMKV 236
Query: 67 REEV 70
+E V
Sbjct: 237 KEAV 240
>gi|357626567|gb|EHJ76618.1| antennapedia-like proteinue protein [Danaus plexippus]
Length = 303
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 226 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 285
Query: 69 EVVIKD 74
E D
Sbjct: 286 EPGSGD 291
>gi|351709858|gb|EHB12777.1| Homeobox protein Hox-D4 [Heterocephalus glaber]
Length = 117
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 19 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 75
>gi|220898206|gb|ACL81460.1| HoxC5 [Latimeria menadoensis]
Length = 222
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK--QLKK 66
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K +LK
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLKS 218
Query: 67 REEV 70
+E +
Sbjct: 219 KEPI 222
>gi|344270291|ref|XP_003406979.1| PREDICTED: homeobox protein Hox-A7-like [Loxodonta africana]
Length = 236
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 134 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDEG 193
Query: 69 EVVIKDP 75
+ P
Sbjct: 194 PTTVAAP 200
>gi|241756325|ref|XP_002406412.1| homeobox protein Hox-A4, putative [Ixodes scapularis]
gi|215506149|gb|EEC15643.1| homeobox protein Hox-A4, putative [Ixodes scapularis]
Length = 140
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 7 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 60
>gi|387232113|gb|AFJ72767.1| homeobox D4, partial [Hipposideros armiger]
Length = 109
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 12 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 68
>gi|18858851|ref|NP_571198.1| homeobox protein Hox-C6a [Danio rerio]
gi|60392438|sp|P15862.2|HXC6A_DANRE RecName: Full=Homeobox protein Hox-C6a; Short=Hox-C6; AltName:
Full=Homeobox protein Zf-61
gi|4322098|gb|AAD15958.1| homeobox protein [Danio rerio]
Length = 231
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 146 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 200
>gi|350405520|ref|XP_003487460.1| PREDICTED: hypothetical protein LOC100747283 [Bombus impatiens]
Length = 543
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 329 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 382
>gi|332692524|gb|AEE90200.1| Homeobox C5b [Anguilla anguilla]
Length = 240
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK--QLKK 66
R Y+ Q LELEKEFH++RY+T RR+ E+ANSL L+ERQ+KIWFQNRR K +K ++K
Sbjct: 177 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQIKIWFQNRRMKWKKDSKMKV 236
Query: 67 REEV 70
+E V
Sbjct: 237 KEAV 240
>gi|14010241|gb|AAK51913.1|AF361329_1 deformed [Folsomia candida]
Length = 163
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 36 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKYKK 89
>gi|4322038|gb|AAD15929.1| homeobox protein [Petromyzon marinus]
Length = 303
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +K K
Sbjct: 231 RTAYTRYQTLELEKEFHFNRYLTRRRRIEVANALCLSERQIKIWFQNRRMKWKKDNK 287
>gi|383849609|ref|XP_003700437.1| PREDICTED: uncharacterized protein LOC100877385 [Megachile
rotundata]
Length = 536
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 324 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 377
>gi|363746032|ref|XP_003643502.1| PREDICTED: homeobox protein Hox-C6-like [Gallus gallus]
Length = 237
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|348522889|ref|XP_003448956.1| PREDICTED: homeobox protein Hox-A7-like [Oreochromis niloticus]
Length = 224
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK--- 65
R YS Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 130 RQTYSRHQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDHKDEP 189
Query: 66 --KREEVVIKDPSKD 78
+ + I+ PS+
Sbjct: 190 SNEEQHCDIQAPSEG 204
>gi|387232139|gb|AFJ72780.1| homeobox D4, partial [Rhinolophus pusillus]
Length = 107
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 69
>gi|387232125|gb|AFJ72773.1| homeobox D4, partial [Rhinolophus ferrumequinum]
Length = 109
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 69
>gi|387232121|gb|AFJ72771.1| homeobox D4, partial [Taphozous melanopogon]
gi|387232137|gb|AFJ72779.1| homeobox D4, partial [Aselliscus stoliczkanus]
gi|387232141|gb|AFJ72781.1| homeobox D4, partial [Hipposideros pomona]
Length = 110
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 69
>gi|440892330|gb|ELR45563.1| Homeobox protein Hox-D4, partial [Bos grunniens mutus]
Length = 134
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 49 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 105
>gi|387232145|gb|AFJ72783.1| homeobox D4, partial [Rhinolophus sinicus]
Length = 107
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 10 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 66
>gi|53733782|gb|AAH83307.1| Hoxc6a protein [Danio rerio]
gi|197247195|gb|AAI65049.1| Hoxc6a protein [Danio rerio]
Length = 223
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 123 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 177
>gi|340727743|ref|XP_003402196.1| PREDICTED: hypothetical protein LOC100642982 [Bombus terrestris]
Length = 543
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 329 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 382
>gi|62958702|gb|AAY23666.1| Hox protein [Oreochromis niloticus]
Length = 98
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 69
>gi|60099962|gb|AAX13115.1| fushi tarazu [Drosophila affinis]
Length = 328
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K
Sbjct: 278 RQTYTRYQTLELEKEFHFNRYITRRRRVDIANALSLSERQIKIWFQNRRMK 328
>gi|291461548|dbj|BAI83408.1| deformed [Parasteatoda tepidariorum]
Length = 291
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 162 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDNK 218
>gi|387232127|gb|AFJ72774.1| homeobox D4, partial [Ia io]
Length = 106
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 11 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 67
>gi|387232123|gb|AFJ72772.1| homeobox D4, partial [Rhinolophus marshalli]
Length = 102
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 9 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 65
>gi|312384373|gb|EFR29114.1| hypothetical protein AND_02195 [Anopheles darlingi]
Length = 462
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 43/62 (69%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
K R V+SD Q LEK F RY++ + ELA +LGLSE QVK WFQNRR K +KQL++
Sbjct: 118 KARTVFSDPQLTGLEKRFEAQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRR 177
Query: 67 RE 68
RE
Sbjct: 178 RE 179
>gi|327263838|ref|XP_003216724.1| PREDICTED: homeobox protein Hox-C6-like [Anolis carolinensis]
Length = 236
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|126343889|ref|XP_001364878.1| PREDICTED: homeobox protein Hox-C6 [Monodelphis domestica]
gi|395540853|ref|XP_003772365.1| PREDICTED: homeobox protein Hox-C6 [Sarcophilus harrisii]
gi|359754108|gb|AEV59529.1| HOXC6 [Macropus eugenii]
Length = 235
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|387232149|gb|AFJ72785.1| homeobox D4, partial [Hipposideros larvatus]
Length = 105
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 11 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 67
>gi|387232117|gb|AFJ72769.1| homeobox D4, partial [Rhinolophus paradoxolophus]
Length = 102
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 8 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 64
>gi|387232111|gb|AFJ72766.1| homeobox D4, partial [Rhinolophus macrotis]
Length = 108
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 11 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 67
>gi|387232107|gb|AFJ72764.1| homeobox D4, partial [Eonycteris spelaea]
Length = 107
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 11 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 67
>gi|325260874|gb|ADZ04664.1| homeobox C6 [Notophthalmus viridescens]
Length = 234
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|359754117|gb|AEV59537.1| HOXD3 [Macropus eugenii]
Length = 429
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKR- 67
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
Query: 68 --EEVVIKDP--SKDLFLSNKVMYT 88
V + P S L +N V Y+
Sbjct: 258 IMHSPVGQSPERSPPLSGANHVGYS 282
>gi|2209198|gb|AAB61441.1| LOX6 [Helobdella robusta]
Length = 292
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R YS Q LELEKEFH++RY+ RR+ E+A+SLGL+ERQ+KIWFQNRR K +K
Sbjct: 89 RTSYSRYQTLELEKEFHFNRYLNGRRRIEIAHSLGLTERQIKIWFQNRRMKWKK 142
>gi|307178555|gb|EFN67244.1| Homeotic protein antennapedia [Camponotus floridanus]
Length = 353
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 275 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 334
Query: 69 EVVIKD 74
E D
Sbjct: 335 EPGSGD 340
>gi|213513838|ref|NP_001133031.1| homeobox protein HoxD4ab [Salmo salar]
gi|157816029|gb|ABV82033.1| homeobox protein HoxD4ab [Salmo salar]
gi|158702378|gb|ABW77564.1| homeobox protein HoxD4ab [Salmo salar]
Length = 236
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHK 206
>gi|387232105|gb|AFJ72763.1| homeobox D4, partial [Miniopterus schreibersii]
Length = 104
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 10 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 66
>gi|295695|gb|AAA50034.1| homeodomain protein, partial [Danio rerio]
Length = 55
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K
Sbjct: 5 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMK 55
>gi|395519809|ref|XP_003764034.1| PREDICTED: homeobox protein Hox-D3 [Sarcophilus harrisii]
Length = 430
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKR- 67
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 258
Query: 68 --EEVVIKDP--SKDLFLSNKVMYT 88
V + P S L +N V Y+
Sbjct: 259 IMHSPVGQSPERSPPLSGANHVGYS 283
>gi|380028330|ref|XP_003697858.1| PREDICTED: uncharacterized protein LOC100873059 [Apis florea]
Length = 550
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 330 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 383
>gi|340727738|ref|XP_003402194.1| PREDICTED: homeotic protein antennapedia [Bombus terrestris]
gi|325305997|gb|ADZ11103.1| antennapedia-like protein [Bombus terrestris]
Length = 352
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 274 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 333
Query: 69 EVVIKD 74
E D
Sbjct: 334 EPGSGD 339
>gi|387232119|gb|AFJ72770.1| homeobox D4, partial [Rhinolophus rex]
Length = 101
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 7 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 63
>gi|387232109|gb|AFJ72765.1| homeobox D4, partial [Miniopterus schreibersii]
Length = 106
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 12 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 68
>gi|195038413|ref|XP_001990654.1| GH19476 [Drosophila grimshawi]
gi|193894850|gb|EDV93716.1| GH19476 [Drosophila grimshawi]
Length = 486
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R YS Q LELEKEFH++RYIT RR+ ++A++L LSERQ+KIWFQNRR K +K
Sbjct: 311 RQTYSRYQTLELEKEFHFNRYITRRRRIDIAHALSLSERQIKIWFQNRRMKSKK 364
>gi|332024158|gb|EGI64374.1| Homeotic protein deformed [Acromyrmex echinatior]
Length = 522
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 309 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHK 365
>gi|254692760|dbj|BAH23875.2| transcription factor Hox6 [Balanoglossus misakiensis]
Length = 240
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+ K
Sbjct: 155 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKEQK 211
>gi|387232135|gb|AFJ72778.1| homeobox D4, partial [Myotis laniger]
Length = 108
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 69
>gi|60099964|gb|AAX13116.1| fushi tarazu [Drosophila miranda]
Length = 333
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K
Sbjct: 283 RQTYTRYQTLELEKEFHFNRYITRRRRVDIANALSLSERQIKIWFQNRRMK 333
>gi|123204512|gb|ABM73572.1| homeodomain protein [Megalobrama amblycephala]
Length = 205
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K K
Sbjct: 146 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKSMK 199
>gi|395835047|ref|XP_003790496.1| PREDICTED: homeobox protein Hox-C6 [Otolemur garnettii]
Length = 235
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|338715592|ref|XP_003363297.1| PREDICTED: homeobox protein Hox-D4-like [Equus caballus]
Length = 163
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 65 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 121
>gi|321475844|gb|EFX86806.1| LOW QUALITY PROTEIN: putative homeotic Sex combs reduced protein
[Daphnia pulex]
Length = 440
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K+ K
Sbjct: 350 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKEHK 406
>gi|6018426|emb|CAB57949.1| homeobox protein [Gallus gallus]
Length = 67
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 7 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 63
>gi|396777|emb|CAA52160.1| divergent antennapedia-class homeodomain protein [Schistocerca
gregaria]
Length = 111
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T + R Y+ Q LELEKEFHY+RY+T RR+ E++ +LGL+ERQ+KIWFQNRR K
Sbjct: 3 TAKRTRQTYTRFQTLELEKEFHYNRYLTRRRRVEISQALGLTERQIKIWFQNRRMK---- 58
Query: 64 LKKREEVVIKDP 75
LKK + P
Sbjct: 59 LKKENGGTLPAP 70
>gi|576592|gb|AAA53290.1| homeobox protein, partial [Homo sapiens]
Length = 73
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K
Sbjct: 15 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 68
>gi|344266085|ref|XP_003405111.1| PREDICTED: homeobox protein Hox-C6-like [Loxodonta africana]
gi|444513899|gb|ELV10484.1| Homeobox protein Hox-C6 [Tupaia chinensis]
Length = 235
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|220898207|gb|ACL81461.1| HoxC6 [Latimeria menadoensis]
Length = 233
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|332692523|gb|AEE90199.1| Homeobox C6b [Anguilla anguilla]
gi|385654516|gb|AFI62012.1| Hox-C6b [Anguilla japonica]
Length = 233
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 144 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 198
>gi|332024150|gb|EGI64366.1| Homeotic protein antennapedia [Acromyrmex echinatior]
Length = 352
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 274 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 333
Query: 69 EVVIKD 74
E D
Sbjct: 334 EPGSGD 339
>gi|391341154|ref|XP_003744896.1| PREDICTED: uncharacterized protein LOC100900312 [Metaseiulus
occidentalis]
Length = 360
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL L+ERQ+KIWFQNRR K +K
Sbjct: 176 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKK 229
>gi|385654538|gb|AFI62031.1| Hox-D4b [Anguilla japonica]
Length = 231
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L +SERQ+KIWFQNRR K +K K
Sbjct: 145 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCVSERQIKIWFQNRRMKWKKDHK 201
>gi|294610346|dbj|BAJ05331.1| homeotic protein Sex combs reduced [Daphnia magna]
Length = 444
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K+ K
Sbjct: 354 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKEHK 410
>gi|157115513|ref|XP_001658241.1| brain-specific homeobox protein, putative [Aedes aegypti]
gi|108876858|gb|EAT41083.1| AAEL007221-PA [Aedes aegypti]
Length = 405
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
K R V+SD Q LEK F RY++ + ELA++LGLSE QVK WFQNRR K +KQL++
Sbjct: 268 KARTVFSDPQLTGLEKRFEAQRYLSTPERVELASALGLSETQVKTWFQNRRMKHKKQLRR 327
Query: 67 RE-EVVIKDPSKDLFLS 82
RE + P++ FLS
Sbjct: 328 REINNAGEFPNRKFFLS 344
>gi|449477637|ref|XP_002188517.2| PREDICTED: homeobox protein Hox-C6-like, partial [Taeniopygia
guttata]
Length = 212
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 147 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 201
>gi|380014422|ref|XP_003691231.1| PREDICTED: homeotic protein antennapedia-like [Apis florea]
Length = 350
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 272 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKG 331
Query: 69 EVVIKD 74
D
Sbjct: 332 TPGSGD 337
>gi|222530736|emb|CAU83356.1| deformed [Parasteatoda tepidariorum]
Length = 289
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 160 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDNK 216
>gi|83318790|emb|CAI91292.1| fushi tarazu [Cupiennius salei]
Length = 178
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%)
Query: 2 TRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 61
T + R Y+ Q LELEKEFH+++Y+T RR+ E+A++LGL+ERQ+KIWFQNRR K +
Sbjct: 49 TPGPKRSRQTYTRYQTLELEKEFHFNQYLTRRRRIEIAHTLGLTERQIKIWFQNRRMKAK 108
Query: 62 KQLK 65
K+ K
Sbjct: 109 KENK 112
>gi|332692512|gb|AEE90189.1| Homeobox C6a [Anguilla anguilla]
gi|385654505|gb|AFI62002.1| Hox-C6a [Anguilla japonica]
Length = 233
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|213513255|ref|NP_001133000.1| homeobox protein HoxC6aa [Salmo salar]
gi|157815942|gb|ABV81990.1| homeobox protein HoxC6aa [Salmo salar]
gi|158702328|gb|ABW77519.1| homeobox protein HoxC6aa [Salmo salar]
Length = 231
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 148 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 202
>gi|297466157|ref|XP_869789.3| PREDICTED: homeobox protein Hox-C6 isoform 1 [Bos taurus]
gi|297474426|ref|XP_002687279.1| PREDICTED: homeobox protein Hox-C6 [Bos taurus]
gi|335287898|ref|XP_003355472.1| PREDICTED: homeobox protein Hox-C6-like [Sus scrofa]
gi|338726314|ref|XP_003365298.1| PREDICTED: homeobox protein Hox-C6-like isoform 1 [Equus caballus]
gi|345792344|ref|XP_003433616.1| PREDICTED: homeobox protein Hox-C6 [Canis lupus familiaris]
gi|348581051|ref|XP_003476291.1| PREDICTED: homeobox protein Hox-C6-like [Cavia porcellus]
gi|410964585|ref|XP_003988834.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Felis catus]
gi|281342177|gb|EFB17761.1| hypothetical protein PANDA_012614 [Ailuropoda melanoleuca]
gi|296487930|tpg|DAA30043.1| TPA: homeobox C6 [Bos taurus]
gi|351706134|gb|EHB09053.1| Homeobox protein Hox-C6 [Heterocephalus glaber]
gi|431921605|gb|ELK18957.1| Homeobox protein Hox-C6 [Pteropus alecto]
gi|432112558|gb|ELK35274.1| Homeobox protein Hox-C6 [Myotis davidii]
gi|440900713|gb|ELR51791.1| Homeobox protein Hox-C6 [Bos grunniens mutus]
Length = 235
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|354490177|ref|XP_003507236.1| PREDICTED: homeobox protein Hox-C6-like [Cricetulus griseus]
gi|344239245|gb|EGV95348.1| Homeobox protein Hox-C6 [Cricetulus griseus]
Length = 235
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|51476|emb|CAA34518.1| unnamed protein product [Mus musculus]
gi|241279|gb|AAB20717.1| homeobox protein 3.3 [Mus sp.]
Length = 235
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|405967565|gb|EKC32713.1| Homeobox protein Hox-B4a [Crassostrea gigas]
Length = 251
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K+ K
Sbjct: 161 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKEHK 217
>gi|4758554|ref|NP_004494.1| homeobox protein Hox-C6 isoform 1 [Homo sapiens]
gi|114145519|ref|NP_034595.2| homeobox protein Hox-C6 [Mus musculus]
gi|332839194|ref|XP_003313691.1| PREDICTED: homeobox protein Hox-C6 [Pan troglodytes]
gi|390467697|ref|XP_002752511.2| PREDICTED: homeobox protein Hox-C6-like [Callithrix jacchus]
gi|392341720|ref|XP_001069410.2| PREDICTED: homeobox protein Hox-C6 isoform 1 [Rattus norvegicus]
gi|392349763|ref|XP_003750463.1| PREDICTED: homeobox protein Hox-C6 [Rattus norvegicus]
gi|395744376|ref|XP_002823404.2| PREDICTED: homeobox protein Hox-C6 [Pongo abelii]
gi|397521943|ref|XP_003831042.1| PREDICTED: homeobox protein Hox-C6 [Pan paniscus]
gi|402886201|ref|XP_003906526.1| PREDICTED: homeobox protein Hox-C6 [Papio anubis]
gi|403296835|ref|XP_003939300.1| PREDICTED: homeobox protein Hox-C6 [Saimiri boliviensis
boliviensis]
gi|426372802|ref|XP_004053305.1| PREDICTED: homeobox protein Hox-C6 isoform 1 [Gorilla gorilla
gorilla]
gi|400007|sp|P10629.2|HXC6_MOUSE RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein Hox-3.3; AltName: Full=Homeobox protein Hox-6.1
gi|115502398|sp|P09630.3|HXC6_HUMAN RecName: Full=Homeobox protein Hox-C6; AltName: Full=Homeobox
protein CP25; AltName: Full=Homeobox protein HHO.C8;
AltName: Full=Homeobox protein Hox-3C
gi|7446275|pir||S72429 homeotic protein HOX C6 (clone 211) - human
gi|1836128|gb|AAB46892.1| homeodomain-containing protein [Homo sapiens]
gi|49901568|gb|AAH74845.1| Homeobox C6 [Homo sapiens]
gi|49902099|gb|AAH74844.1| Homeobox C6 [Homo sapiens]
gi|119617153|gb|EAW96747.1| homeobox C6, isoform CRA_b [Homo sapiens]
gi|148671996|gb|EDL03943.1| homeobox C6 [Mus musculus]
gi|149031890|gb|EDL86802.1| homeo box C6 [Rattus norvegicus]
gi|187954707|gb|AAI41062.1| Homeo box C6 [Mus musculus]
gi|306921741|dbj|BAJ17950.1| homeobox C6 [synthetic construct]
gi|355564296|gb|EHH20796.1| Homeobox protein Hox-3C [Macaca mulatta]
gi|355786154|gb|EHH66337.1| Homeobox protein Hox-3C [Macaca fascicularis]
gi|410226590|gb|JAA10514.1| homeobox C6 [Pan troglodytes]
gi|410255858|gb|JAA15896.1| homeobox C6 [Pan troglodytes]
gi|410348018|gb|JAA40758.1| homeobox C6 [Pan troglodytes]
Length = 235
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|60099966|gb|AAX13117.1| fushi tarazu [Drosophila pseudoobscura]
Length = 326
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K
Sbjct: 276 RQTYTRYQTLELEKEFHFNRYITRRRRVDIANALSLSERQIKIWFQNRRMK 326
>gi|47551093|ref|NP_999725.1| homeobox protein HB1 [Strongylocentrotus purpuratus]
gi|2506527|sp|P13545.2|HMB1_STRPU RecName: Full=Homeobox protein HB1; AltName: Full=SPHBOX1
gi|1339973|dbj|BAA12813.1| homeobox [Strongylocentrotus purpuratus]
Length = 308
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKR 67
R Y+ Q LELEKEFH++RY+T RR+ EL++ LGL+ERQ+KIWFQNRR K +K+ K +
Sbjct: 194 RQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKESKNK 252
>gi|357626155|gb|EHJ76347.1| Deformed [Danaus plexippus]
Length = 228
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 24 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 77
>gi|348521442|ref|XP_003448235.1| PREDICTED: homeobox protein Hox-C6a-like [Oreochromis niloticus]
Length = 234
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 144 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 198
>gi|48146025|emb|CAG33235.1| HOXC6 [Homo sapiens]
Length = 235
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|410899256|ref|XP_003963113.1| PREDICTED: homeobox protein Hox-C6a-like [Takifugu rubripes]
gi|82227628|sp|O42504.1|HXC6A_FUGRU RecName: Full=Homeobox protein Hox-C6a; AltName: Full=FrHOXC-6
gi|2341089|gb|AAB68682.1| homeobox protein HOXC-6 [Takifugu rubripes]
gi|94482830|gb|ABF22446.1| homeobox protein HoxC6a [Takifugu rubripes]
Length = 236
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 144 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 198
>gi|74267563|dbj|BAE44280.1| hoxC6a [Oryzias latipes]
gi|83016965|dbj|BAE53488.1| hoxC6a [Oryzias latipes]
Length = 233
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 143 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 197
>gi|154183818|gb|ABS70759.1| Hoxc6a [Haplochromis burtoni]
Length = 234
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 144 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 198
>gi|159227|gb|AAA19914.1| Lox1 protein, partial [Hirudo medicinalis]
Length = 421
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R YS QQ LELEKEFH++RY+T RR+ E+A L LSERQ+KIWFQNRR K +K+
Sbjct: 280 RTSYSRQQTLELEKEFHFNRYLTKRRRVEIAQMLKLSERQIKIWFQNRRMKWKKE 334
>gi|213514426|ref|NP_001133007.1| homeobox protein HoxC6ab [Salmo salar]
gi|157815960|gb|ABV81999.1| homeobox protein HoxC6ab [Salmo salar]
gi|158702336|gb|ABW77526.1| homeobox protein HoxC6ab [Salmo salar]
Length = 228
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 146 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 200
>gi|432865300|ref|XP_004070515.1| PREDICTED: homeobox protein Hox-C6a-like [Oryzias latipes]
Length = 234
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 144 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 198
>gi|75674198|dbj|BAE44510.1| Deformed [Mamestra brassicae]
Length = 226
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 24 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 77
>gi|345316078|ref|XP_001518990.2| PREDICTED: homeobox protein Hox-C6-like, partial [Ornithorhynchus
anatinus]
Length = 260
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 187 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 241
>gi|332692541|gb|AEE90215.1| Homeobox D4b [Anguilla anguilla]
Length = 231
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L +SERQ+KIWFQNRR K +K K
Sbjct: 145 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCVSERQIKIWFQNRRMKWKKDHK 201
>gi|6166223|sp|O57374.2|HXD4A_DANRE RecName: Full=Homeobox protein Hox-D4a; Short=Hox-D4
gi|27362953|gb|AAN86981.1| homeodomain protein Hoxd4A [Danio rerio]
Length = 236
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E A++L LSERQ+KIWFQNRR K +K K
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIESAHTLSLSERQIKIWFQNRRMKWKKDHK 206
>gi|62826028|gb|AAH94172.1| Unknown (protein for MGC:115122) [Xenopus laevis]
Length = 234
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|147900209|ref|NP_001081015.1| homeobox protein Hox-C6 [Xenopus laevis]
gi|123243|sp|P02832.2|HXC6_XENLA RecName: Full=Homeobox protein Hox-C6; AltName: Full=AC1; AltName:
Full=XlHbox-1
gi|64744|emb|CAA31021.1| unnamed protein product [Xenopus laevis]
gi|54038055|gb|AAH84319.1| XlHbox1 protein [Xenopus laevis]
Length = 234
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|307213521|gb|EFN88930.1| Homeotic protein antennapedia [Harpegnathos saltator]
Length = 236
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 158 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 217
Query: 69 EVVIKD 74
E D
Sbjct: 218 EPGSGD 223
>gi|154183831|gb|ABS70771.1| Hoxa7a [Haplochromis burtoni]
Length = 224
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R YS Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 130 RQTYSRHQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDHK 186
>gi|324516674|gb|ADY46601.1| Homeobox protein mab-5 [Ascaris suum]
Length = 200
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R YS Q LELEKEFHY++Y+T +R+ E++ SL LSERQVKIWFQNRR K +K+ K
Sbjct: 125 RQTYSRNQTLELEKEFHYNKYLTRKRRQEISESLQLSERQVKIWFQNRRMKHKKETK 181
>gi|195389703|ref|XP_002053514.1| GJ23932 [Drosophila virilis]
gi|194151600|gb|EDW67034.1| GJ23932 [Drosophila virilis]
Length = 253
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 43 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 96
>gi|170054312|ref|XP_001863070.1| brain-specific homeobox protein [Culex quinquefasciatus]
gi|167874590|gb|EDS37973.1| brain-specific homeobox protein [Culex quinquefasciatus]
Length = 370
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
K R V+SD Q LEK F RY++ + ELA++LGLSE QVK WFQNRR K +KQL++
Sbjct: 180 KARTVFSDPQLTGLEKRFEAQRYLSTPERVELASALGLSETQVKTWFQNRRMKHKKQLRR 239
Query: 67 RE 68
RE
Sbjct: 240 RE 241
>gi|62958674|gb|AAY23657.1| Hox protein [Oreochromis niloticus]
Length = 119
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 13 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 66
>gi|86604731|ref|NP_001034510.1| transcription factor deformed [Tribolium castaneum]
gi|13241682|gb|AAK16423.1|AF321227_3 Dfd [Tribolium castaneum]
gi|1754686|gb|AAB39355.1| transcription factor Deformed [Tribolium castaneum]
gi|270002806|gb|EEZ99253.1| deformed [Tribolium castaneum]
Length = 412
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 237 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 290
>gi|58585092|ref|NP_001011571.1| homeobox protein H90 [Apis mellifera]
gi|9967824|emb|CAC06383.1| Antennapedia protein [Apis mellifera]
Length = 352
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 274 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSKG 333
Query: 69 EVVIKD 74
D
Sbjct: 334 TPGSGD 339
>gi|301762936|ref|XP_002916894.1| PREDICTED: hypothetical protein LOC100482582 [Ailuropoda
melanoleuca]
Length = 805
Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 731 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 787
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R YS Q LELEKEF ++ Y+T +R+ E++++LGL+ERQVKIWFQNRR K +K+ K
Sbjct: 396 RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK 453
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 3 RTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R+ K R Y+ Q LELEKEF ++ Y+T R+ E+A L LSERQVKIWFQNRR K +K
Sbjct: 180 RSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 239
Query: 63 QLKKR 67
K++
Sbjct: 240 MNKEQ 244
>gi|165873663|gb|ABY67956.1| sex combs reduced hox protein [Capitella teleta]
Length = 197
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL L+ERQ+KIWFQNRR K +K+ K
Sbjct: 108 RTSYTRHQTLELEKEFHFNRYLTRRRRIEIAHSLNLTERQIKIWFQNRRMKWKKEHK 164
>gi|213510894|ref|NP_001135139.1| homeobox protein HoxC6ba [Salmo salar]
gi|157815980|gb|ABV82009.1| homeobox protein HoxC6ba [Salmo salar]
gi|158702348|gb|ABW77537.1| homeobox protein HoxC6ba [Salmo salar]
Length = 232
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|38016607|gb|AAR07637.1| transcription factor Hox6 [Ptychodera flava]
Length = 239
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++LGL+ERQ+KIWFQNRR K +K+ K
Sbjct: 154 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALGLTERQIKIWFQNRRMKWKKEQK 210
>gi|34398398|gb|AAQ67266.1| antennapedia [Drosophila virilis]
Length = 380
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
K + + + R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K
Sbjct: 295 KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 354
Query: 61 RKQLKKREE 69
+K+ K + E
Sbjct: 355 KKENKTKGE 363
>gi|14916584|sp|Q9IA11.1|HXD5_HETFR RecName: Full=Homeobox protein Hox-D5
gi|7271819|gb|AAF44631.1|AF224263_1 HoxD5 [Heterodontus francisci]
Length = 252
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K K +
Sbjct: 181 RTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD-NKLK 239
Query: 69 EVVIKDPSKDL 79
+ + P
Sbjct: 240 SINVSPPGGGF 250
>gi|322799475|gb|EFZ20783.1| hypothetical protein SINV_00833 [Solenopsis invicta]
Length = 522
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 310 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHK 366
>gi|2661827|emb|CAA74883.1| Hoxd4 protein [Danio rerio]
Length = 256
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E A++L LSERQ+KIWFQNRR K +K K
Sbjct: 170 RTAYTRQQVLELEKEFHFNRYLTRRRRIESAHTLSLSERQIKIWFQNRRMKWKKDHK 226
>gi|156933|gb|AAA28372.1| ftz protein, partial [Drosophila melanogaster]
Length = 74
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 12 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 65
>gi|2661823|emb|CAA74881.1| Hoxc6 protein [Danio rerio]
Length = 89
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 4 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 58
>gi|335371121|gb|AEH57089.1| Hox4 [Bugula neritina]
Length = 233
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K+ K
Sbjct: 148 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLDLSERQIKIWFQNRRMKWKKEHK 204
>gi|34395628|sp|Q24645.1|ANTP_DROSU RecName: Full=Homeotic protein antennapedia
gi|829192|emb|CAA43307.1| Antp [Drosophila subobscura]
Length = 394
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
K + + + R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K
Sbjct: 309 KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 368
Query: 61 RKQLKKREE 69
+K+ K + E
Sbjct: 369 KKENKTKGE 377
>gi|151935661|gb|ABS18812.1| Hox5, partial [Flaccisagitta enflata]
Length = 335
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 45/55 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ Q LELEKEFH++RY+T RR+ E+ ++LGL+ERQ+KIWFQNRR K +K+
Sbjct: 207 RQTYTRHQTLELEKEFHFNRYLTRRRRIEIVHALGLTERQIKIWFQNRRMKWKKE 261
>gi|354474762|ref|XP_003499599.1| PREDICTED: homeobox protein Hox-B7-like [Cricetulus griseus]
Length = 217
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 141 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTSG 200
Query: 69 EVVIK 73
+ V
Sbjct: 201 QGVTG 205
>gi|37029992|gb|AAQ88098.1| hox protein Dfd [Schistosoma mansoni]
Length = 543
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ QQ LELEKEFHY++Y+T +R+ E+A++L LSERQ+KIWFQNRR K +K+
Sbjct: 220 RTAYTRQQILELEKEFHYNKYLTRKRRLEIAHTLTLSERQIKIWFQNRRMKWKKE 274
>gi|74096089|ref|NP_001027669.1| homeoprotein 3 [Ciona intestinalis]
gi|4583562|emb|CAB40561.1| homeoprotein [Ciona intestinalis]
Length = 733
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 46/61 (75%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q +ELEKEFH+S Y+ R+ ELA LGL+ERQ+KIWFQNRR K +K+ K+
Sbjct: 369 RERTAYTNSQLVELEKEFHFSHYLCRPRRIELAQGLGLTERQIKIWFQNRRMKFKKEQKQ 428
Query: 67 R 67
+
Sbjct: 429 K 429
>gi|66476111|gb|AAX63762.2| HoxC6bi [Oncorhynchus mykiss]
Length = 194
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
R +YS Q LELEKEFH++RY+T RR+ E+AN+L LSERQ+KIWFQNRR K
Sbjct: 144 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLSERQIKIWFQNRRMK 194
>gi|66476107|gb|AAX63755.2| HoxB4ai [Oncorhynchus mykiss]
Length = 65
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K
Sbjct: 15 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLVLSERQIKIWFQNRRMK 65
>gi|255742464|gb|ACU32577.1| homeobox protein HoxC6 [Callorhinchus milii]
Length = 219
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 145 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 199
>gi|158300107|ref|XP_320094.4| AGAP009302-PA [Anopheles gambiae str. PEST]
gi|157013842|gb|EAA15156.4| AGAP009302-PA [Anopheles gambiae str. PEST]
Length = 334
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
K R V+SD Q LEK F RY++ + ELA++LGLSE QVK WFQNRR K +KQL++
Sbjct: 267 KARTVFSDPQLTGLEKRFEAQRYLSTPERVELASALGLSETQVKTWFQNRRMKHKKQLRR 326
Query: 67 RE 68
RE
Sbjct: 327 RE 328
>gi|291500845|gb|ADE08353.1| homeobox C6 [Monodelphis domestica]
Length = 208
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 118 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 172
>gi|5916188|gb|AAD55932.1|AF163856_1 homeoprotein CH-Hox1 [Chaetopterus variopedatus]
Length = 302
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R ++++Q ELEKEFH+++Y+T R+ E+A +LGL+E QVKIWFQNRR K++K++K+
Sbjct: 219 RTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQVKIWFQNRRMKQKKRMKEGG 278
Query: 69 EVV 71
VV
Sbjct: 279 VVV 281
>gi|297591838|gb|ADI46796.1| RE64079p [Drosophila melanogaster]
Length = 378
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
K + + + R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K
Sbjct: 293 KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 352
Query: 61 RKQLKKREE 69
+K+ K + E
Sbjct: 353 KKENKTKGE 361
>gi|8439289|emb|CAB94151.1| HOXC-6 [Gallus gallus]
Length = 101
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 12 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 66
>gi|45553281|ref|NP_996167.1| antennapedia, isoform J [Drosophila melanogaster]
gi|45553283|ref|NP_996168.1| antennapedia, isoform I [Drosophila melanogaster]
gi|45553287|ref|NP_996170.1| antennapedia, isoform L [Drosophila melanogaster]
gi|45553297|ref|NP_996175.1| antennapedia, isoform M [Drosophila melanogaster]
gi|123317|sp|P02833.1|ANTP_DROME RecName: Full=Homeotic protein antennapedia
gi|156947|gb|AAA28376.1| Antennapedia differentiation protein [Drosophila melanogaster]
gi|156949|gb|AAA70214.1| antennapedia protein [Drosophila melanogaster]
gi|156951|gb|AAA70216.1| antennapedia protein [Drosophila melanogaster]
gi|1805742|emb|CAA27417.1| antennapedia protein [Drosophila melanogaster]
gi|4389423|gb|AAD19793.1| homeodomain protein [Drosophila melanogaster]
gi|45446391|gb|AAS65111.1| antennapedia, isoform I [Drosophila melanogaster]
gi|45446392|gb|AAS65112.1| antennapedia, isoform J [Drosophila melanogaster]
gi|45446393|gb|AAS65113.1| antennapedia, isoform L [Drosophila melanogaster]
gi|45446394|gb|AAS65114.1| antennapedia, isoform M [Drosophila melanogaster]
gi|224976|prf||1205216A gene Antp
Length = 378
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
K + + + R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K
Sbjct: 293 KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 352
Query: 61 RKQLKKREE 69
+K+ K + E
Sbjct: 353 KKENKTKGE 361
>gi|1334622|emb|CAA35170.1| unnamed protein product [Danio rerio]
Length = 96
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 11 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 65
>gi|45553285|ref|NP_996169.1| antennapedia, isoform F [Drosophila melanogaster]
gi|45553291|ref|NP_996172.1| antennapedia, isoform E [Drosophila melanogaster]
gi|45446387|gb|AAS65107.1| antennapedia, isoform E [Drosophila melanogaster]
gi|45446388|gb|AAS65108.1| antennapedia, isoform F [Drosophila melanogaster]
Length = 365
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
K + + + R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K
Sbjct: 280 KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW 339
Query: 61 RKQLKKREE 69
+K+ K + E
Sbjct: 340 KKENKTKGE 348
>gi|88604716|gb|ABD46729.1| homeobox protein sex comb reduced [Nymphon gracile]
Length = 274
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRA---KERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR KE KQL
Sbjct: 193 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKEHKQLP 252
Query: 66 K 66
Sbjct: 253 G 253
>gi|322366542|gb|ADW95345.1| Hox7 [Paracentrotus lividus]
Length = 321
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKR 67
R Y+ Q LELEKEFH++RY+T RR+ EL++ LGL+ERQ+KIWFQNRR K +K+ K +
Sbjct: 206 RQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKESKNK 264
>gi|5163354|gb|AAD40645.1|AF144889_1 HB2 homeodomain protein [Priapulus caudatus]
Length = 77
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKR 67
R Y+ Q LELEKEFH++RY+T RR+ E+AN L L+ERQ+KIWFQNRR K +K+ K R
Sbjct: 6 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIANMLCLTERQIKIWFQNRRMKWKKECKAR 64
>gi|170070071|ref|XP_001869455.1| homeotic antennapedia protein [Culex quinquefasciatus]
gi|167865904|gb|EDS29287.1| homeotic antennapedia protein [Culex quinquefasciatus]
Length = 361
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 285 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 344
Query: 69 EVVIKD 74
E D
Sbjct: 345 EPGSGD 350
>gi|328778463|ref|XP_394120.4| PREDICTED: homeobox protein abdominal-A homolog isoform 1 [Apis
mellifera]
Length = 396
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY+ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 273 RQTYTRFQTLELEKEFHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 332
Query: 69 EV 70
E+
Sbjct: 333 EI 334
>gi|6513841|gb|AAD01939.2| homeobox protein HOXA7 [Homo sapiens]
Length = 230
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQVKIWFQNRR K +K+ K
Sbjct: 134 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQVKIWFQNRRMKWKKEHKDEG 193
Query: 69 EVVIKDP 75
P
Sbjct: 194 PTAAAAP 200
>gi|224040|prf||1008211A fushi tarazu gene
Length = 345
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +
Sbjct: 283 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKN 336
>gi|347972374|ref|XP_003436885.1| AGAP004660-PB [Anopheles gambiae str. PEST]
gi|333467595|gb|EGK96613.1| AGAP004660-PB [Anopheles gambiae str. PEST]
Length = 140
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 64 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 123
Query: 69 EVVIKD 74
E D
Sbjct: 124 EPGSGD 129
>gi|58803017|gb|AAW82628.1| HoxC6 [Gasterosteus aculeatus]
Length = 102
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 12 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 66
>gi|411125387|gb|AFW04338.1| Deformed, partial [Saldula pallipes]
Length = 164
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 4 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 57
>gi|1333934|emb|CAA31022.1| unnamed protein product [Mus musculus]
Length = 221
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 131 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 185
>gi|66476109|gb|AAX63759.2| HoxC4a-2 [Oncorhynchus mykiss]
Length = 209
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAK 59
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L L ERQ+KIWFQNRR K
Sbjct: 159 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLPERQIKIWFQNRRMK 209
>gi|256086116|ref|XP_002579251.1| SmHox4; gsx family homeobox protein [Schistosoma mansoni]
Length = 479
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ QQ LELEKEFHY++Y+T +R+ E+A++L LSERQ+KIWFQNRR K +K+
Sbjct: 156 RTAYTRQQILELEKEFHYNKYLTRKRRLEIAHTLTLSERQIKIWFQNRRMKWKKE 210
>gi|332692513|gb|AEE90190.1| Homeobox C5a [Anguilla anguilla]
gi|385654506|gb|AFI62003.1| Hox-C5a [Anguilla japonica]
Length = 250
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+ANSL L+ERQ+KIWFQNRR K +K K
Sbjct: 175 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQIKIWFQNRRMKWKKDSK 231
>gi|306879|gb|AAA36007.1| homeo box c8 protein [Homo sapiens]
Length = 153
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 63 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|195152087|ref|XP_002016968.1| GL22046 [Drosophila persimilis]
gi|194112025|gb|EDW34068.1| GL22046 [Drosophila persimilis]
Length = 797
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 192 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 251
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 252 KTDDEDNKDSLK 263
>gi|87295471|gb|ABD37032.1| deformed [Artemia persimilis]
Length = 134
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 13 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 66
>gi|395540855|ref|XP_003772366.1| PREDICTED: homeobox protein Hox-C5 [Sarcophilus harrisii]
Length = 222
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK--QLKK 66
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K +LK
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLKS 218
Query: 67 REEV 70
+E +
Sbjct: 219 KEAL 222
>gi|357617807|gb|EHJ71004.1| maxillopedia [Danaus plexippus]
Length = 548
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LKKR 67
R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L K
Sbjct: 59 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKS 118
Query: 68 EEVVIKD 74
E+ KD
Sbjct: 119 EDGDDKD 125
>gi|387231845|gb|AFJ72633.1| homeobox C6, partial [Rhinolophus affinis]
Length = 91
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 1 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 55
>gi|359754107|gb|AEV59528.1| HOXC5 [Macropus eugenii]
Length = 222
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK--QLKK 66
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K +LK
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLKS 218
Query: 67 REEV 70
+E +
Sbjct: 219 KEAL 222
>gi|198415285|ref|XP_002124598.1| PREDICTED: similar to putative homeobox protein Hox6/7 [Ciona
intestinalis]
Length = 148
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R YS Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 78 RQTYSRHQTLELEKEFHYNRYLTRRRRIEVAHTLCLTERQIKIWFQNRRMKWKKENK 134
>gi|198453492|ref|XP_002137681.1| pb, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132379|gb|EDY68239.1| pb, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 801
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 192 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 251
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 252 KTDDEDNKDSLK 263
>gi|28629645|gb|AAO43028.1| HoxB3 [Latimeria menadoensis]
Length = 252
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKR 67
R Y+ Q +ELEKEFH++RY+ R+ E+AN L LSERQ+KIWFQNRR K +K K R
Sbjct: 18 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSR 76
>gi|62958679|gb|AAY23658.1| Hox protein [Oreochromis niloticus]
Length = 101
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 11 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 65
>gi|11102|emb|CAA49683.1| Dfd [Artemia franciscana]
Length = 146
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 15 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 68
>gi|57164349|ref|NP_001009335.1| homeobox protein Hox-C6 [Ovis aries]
gi|338726316|ref|XP_003365299.1| PREDICTED: homeobox protein Hox-C6-like isoform 2 [Equus caballus]
gi|410964587|ref|XP_003988835.1| PREDICTED: homeobox protein Hox-C6 isoform 2 [Felis catus]
gi|1708358|sp|P49925.1|HXC6_SHEEP RecName: Full=Homeobox protein Hox-C6
gi|988252|gb|AAA75473.1| Hox C6 [Ovis aries]
Length = 153
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 63 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|319429378|gb|ADV56964.1| homeodomain protein HoxD3a [Mylopharyngodon piceus]
Length = 289
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 150 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 209
Query: 69 EVVIKDP-------SKDLFLSNKVMYTYLVFQV 94
++ P S L SN + Y+ + V
Sbjct: 210 --IMHSPLGHSPDRSPPLSGSNHIGYSGQLPNV 240
>gi|429510502|gb|AFZ94989.1| transcription factor Hox4 [Petromyzon marinus]
Length = 271
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K K
Sbjct: 189 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDHK 245
>gi|87295473|gb|ABD37033.1| deformed [Artemia sp. BaiYanNao]
Length = 133
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 12 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 65
>gi|319429380|gb|ADV56965.1| homeodomain protein HoxD3a [Ctenopharyngodon idella]
Length = 288
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 149 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 208
Query: 69 EVVIKDP-------SKDLFLSNKVMYTYLVFQV 94
++ P S L SN + Y+ + V
Sbjct: 209 --IMHSPLGHSPDRSPPLSGSNHIGYSGQLPNV 239
>gi|18150505|gb|AAL61642.1|AF434666_1 Hox4w [Petromyzon marinus]
Length = 271
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K K
Sbjct: 189 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDHK 245
>gi|309313|gb|AAA37833.1| hox-1.1 peptide [Mus musculus]
Length = 229
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 133 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDES 192
Query: 69 EVVIKDP 75
+ P
Sbjct: 193 QAPTAAP 199
>gi|5596516|gb|AAD45591.1|AF144676_1 Lox5 homeodomain protein [Lingula anatina]
Length = 97
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ Q LELEKEFHY+RY+T RR+ E+A+ LGL+ERQ+KIWFQNRR K +K+
Sbjct: 9 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHHLGLTERQIKIWFQNRRMKWKKE 63
>gi|24497544|ref|NP_710160.1| homeobox protein Hox-C6 isoform 2 [Homo sapiens]
gi|426372804|ref|XP_004053306.1| PREDICTED: homeobox protein Hox-C6 isoform 2 [Gorilla gorilla
gorilla]
gi|51412|emb|CAA31023.1| unnamed protein product [Mus musculus]
gi|26341506|dbj|BAC34415.1| unnamed protein product [Mus musculus]
gi|119617152|gb|EAW96746.1| homeobox C6, isoform CRA_a [Homo sapiens]
gi|189054716|dbj|BAG37349.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 63 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|353232233|emb|CCD79588.1| gsx family homeobox protein [Schistosoma mansoni]
Length = 393
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ QQ LELEKEFHY++Y+T +R+ E+A++L LSERQ+KIWFQNRR K +K+
Sbjct: 70 RTAYTRQQILELEKEFHYNKYLTRKRRLEIAHTLTLSERQIKIWFQNRRMKWKKE 124
>gi|270065291|gb|ACZ60640.1| sex combs reduced [Oncopeltus fasciatus]
Length = 302
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 218 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMAS 277
Query: 69 EVVIK 73
VI
Sbjct: 278 MNVIP 282
>gi|3445430|emb|CAA07499.1| homeobox protein [Cupiennius salei]
Length = 172
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +E
Sbjct: 90 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKAKE 149
Query: 69 EVV 71
Sbjct: 150 PAA 152
>gi|51474|emb|CAA34517.1| unnamed protein product [Mus musculus]
Length = 153
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 63 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|285206861|gb|ADC35162.1| deformed [Piesma josifovi]
Length = 171
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY++Y+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 4 RTAYTRHQILELEKEFHYNKYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 57
>gi|319429392|gb|ADV56971.1| homeodomain protein HoxD3a [Luciobrama macrocephalus]
Length = 286
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 147 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 206
Query: 69 EVVIKDP-------SKDLFLSNKVMYTYLVFQV 94
++ P S L SN + Y+ + V
Sbjct: 207 --IMHSPLGHSPDRSPPLSGSNHIGYSGQLPNV 237
>gi|28629673|gb|AAO43042.1| HoxD3 [Latimeria menadoensis]
Length = 248
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T + R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K
Sbjct: 12 TSKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 71
Query: 64 LKKR---EEVVIKDP--SKDLFLSNKVMYT 88
K + V + P S L + N V ++
Sbjct: 72 QKAKGIMHSPVGQSPDRSPPLSVPNHVGFS 101
>gi|87295479|gb|ABD37036.1| deformed [Artemia sp. Kazakhstan HL-2005]
Length = 133
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 12 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 65
>gi|37625188|gb|AAQ95789.1| HOXD4 [Xenopus laevis]
Length = 218
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+SL LSE Q+KIWFQNRR K +K K
Sbjct: 132 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSECQIKIWFQNRRMKWKKDHK 188
>gi|198453463|ref|XP_002137673.1| antp, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132367|gb|EDY68231.1| antp, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 392
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 315 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 374
Query: 69 E 69
E
Sbjct: 375 E 375
>gi|195152057|ref|XP_002016955.1| GL22036 [Drosophila persimilis]
gi|194112012|gb|EDW34055.1| GL22036 [Drosophila persimilis]
Length = 395
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 318 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 377
Query: 69 E 69
E
Sbjct: 378 E 378
>gi|64742|emb|CAA31020.1| unnamed protein product [Xenopus laevis]
Length = 152
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 63 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 117
>gi|28629675|gb|AAO43043.1| HoxD4 [Latimeria menadoensis]
Length = 99
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K K K
Sbjct: 13 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWEKDHK 69
>gi|319429388|gb|ADV56969.1| homeodomain protein HoxD3a [Opsariichthys bidens]
Length = 287
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 148 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 207
Query: 69 EVVIKDP-------SKDLFLSNKVMYTYLVFQV 94
++ P S L SN + Y+ + V
Sbjct: 208 --IMHSPLGHSPDRSPPLSGSNHIGYSGQLPNV 238
>gi|194742008|ref|XP_001953501.1| GF17789 [Drosophila ananassae]
gi|190626538|gb|EDV42062.1| GF17789 [Drosophila ananassae]
Length = 378
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 301 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 360
Query: 69 E 69
E
Sbjct: 361 E 361
>gi|195446505|ref|XP_002070809.1| GK10824 [Drosophila willistoni]
gi|194166894|gb|EDW81795.1| GK10824 [Drosophila willistoni]
Length = 374
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 297 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 356
Query: 69 E 69
E
Sbjct: 357 E 357
>gi|496845|emb|CAA83976.1| DNA-Binding Protein [Girardia tigrina]
Length = 82
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQL 64
R YS QQ LELEKEF+Y++Y+T RR+ E+ANS+ LSERQ+KIWFQNRR K +K +
Sbjct: 18 RQAYSRQQTLELEKEFYYNQYLTRRRRIEIANSVCLSERQIKIWFQNRRMKYKKDV 73
>gi|156938|gb|AAA28375.1| deformed protein, partial [Drosophila melanogaster]
Length = 427
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 208 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 261
>gi|148228967|ref|NP_001079291.1| homeobox protein Hox-C5 [Xenopus laevis]
gi|115527869|gb|AAI24881.1| Hoxc5-A protein [Xenopus laevis]
Length = 226
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K K
Sbjct: 163 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDTK 219
>gi|6754234|ref|NP_034585.1| homeobox protein Hox-A7 [Mus musculus]
gi|1346331|sp|P02830.2|HXA7_MOUSE RecName: Full=Homeobox protein Hox-A7; AltName: Full=Homeobox
protein Hox-1.1; AltName: Full=Homeobox protein M6-12;
Short=M6
gi|664758|gb|AAC52160.1| Hoxa7 [Mus musculus]
gi|26329169|dbj|BAC28323.1| unnamed protein product [Mus musculus]
gi|124297803|gb|AAI31979.1| Homeo box A7 [Mus musculus]
gi|124376130|gb|AAI32644.1| Homeo box A7 [Mus musculus]
gi|148666246|gb|EDK98662.1| homeobox A7, isoform CRA_c [Mus musculus]
Length = 229
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 133 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDES 192
Query: 69 EVVIKDP 75
+ P
Sbjct: 193 QAPTAAP 199
>gi|390178659|ref|XP_003736700.1| pb, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859536|gb|EIM52773.1| pb, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 796
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ-LK 65
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQNRR K ++Q L
Sbjct: 187 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLS 246
Query: 66 KREEVVIKDPSK 77
K ++ KD K
Sbjct: 247 KTDDEDNKDSLK 258
>gi|87295475|gb|ABD37034.1| deformed [Artemia franciscana]
gi|87295477|gb|ABD37035.1| deformed [Artemia franciscana]
gi|87295481|gb|ABD37037.1| deformed [Artemia sp. MaDuo]
gi|87295483|gb|ABD37038.1| deformed [Artemia sinica]
gi|87295485|gb|ABD37039.1| deformed [Artemia sinica]
gi|87295487|gb|ABD37040.1| deformed [Artemia sinica]
gi|87295489|gb|ABD37041.1| deformed [Artemia sp. Qi Xiang Cuo]
gi|87295491|gb|ABD37042.1| deformed [Artemia urmiana]
Length = 133
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 12 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 65
>gi|390178663|ref|XP_003736701.1| lab, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859538|gb|EIM52774.1| lab, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 257
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 3 RTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
T + R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K
Sbjct: 118 NTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKK 177
Query: 63 QLKKREEVVIKD 74
++K E ++ D
Sbjct: 178 RVK--EGLIPAD 187
>gi|220898215|gb|ACL81468.1| HoxD3 [Latimeria menadoensis]
Length = 396
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T + R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K
Sbjct: 160 TSKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 219
Query: 64 LKKR---EEVVIKDP--SKDLFLSNKVMYT 88
K + V + P S L + N V ++
Sbjct: 220 QKAKGIMHSPVGQSPDRSPPLSVPNHVGFS 249
>gi|1334649|emb|CAA30122.1| unnamed protein product [Xenopus laevis]
Length = 114
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 25 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 79
>gi|348522365|ref|XP_003448695.1| PREDICTED: homeobox protein Hox-B5b-like [Oreochromis niloticus]
Length = 293
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K +
Sbjct: 222 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 281
Query: 69 EVVIKDPS 76
++ S
Sbjct: 282 MSLVTGGS 289
>gi|321475843|gb|EFX86805.1| putative homeotic Fushi-tarazu protein [Daphnia pulex]
Length = 428
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 47/61 (77%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ ++
Sbjct: 287 RQTYTRYQTLELEKEFHFNRYLTRRRRVEIAHALCLTERQIKIWFQNRRMKAKKETTTQQ 346
Query: 69 E 69
Sbjct: 347 H 347
>gi|301128901|emb|CBL59363.1| HoxD5 [Scyliorhinus canicula]
Length = 252
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K K +
Sbjct: 181 RTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD-NKLK 239
Query: 69 EVVIKDPSKDL 79
+ + P+
Sbjct: 240 SINVSPPAGGF 250
>gi|449266119|gb|EMC77229.1| Homeobox protein Hox-C5, partial [Columba livia]
Length = 221
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK--QLKK 66
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K +LK
Sbjct: 158 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLKS 217
Query: 67 REEV 70
+E +
Sbjct: 218 KEAL 221
>gi|21389049|gb|AAM50459.1|AF393443_1 antennapedia [Sacculina carcini]
Length = 369
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 49/63 (77%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K ++
Sbjct: 292 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKAKD 351
Query: 69 EVV 71
V
Sbjct: 352 GSV 354
>gi|74267539|dbj|BAE44268.1| hoxB5a [Oryzias latipes]
gi|83016948|dbj|BAE53475.1| hoxB5a [Oryzias latipes]
Length = 311
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K K +
Sbjct: 239 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD-NKVK 297
Query: 69 EVVIKDPSKDLF 80
+ I P F
Sbjct: 298 SMSITAPGASHF 309
>gi|432925214|ref|XP_004080700.1| PREDICTED: homeobox protein Hox-B5b-like [Oryzias latipes]
gi|74267553|dbj|BAE44275.1| hoxB5b [Oryzias latipes]
gi|83016957|dbj|BAE53482.1| hoxB5b [Oryzias latipes]
Length = 281
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K +
Sbjct: 210 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 269
Query: 69 EVVIKDPS 76
++ S
Sbjct: 270 MSLVTGGS 277
>gi|70569907|dbj|BAE06500.1| transcription factor protein [Ciona intestinalis]
Length = 733
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 46/61 (75%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y++ Q +ELEKEFH+S Y+ R+ ELA LGL+ERQ+KIWFQNRR K +K+ K+
Sbjct: 369 RERTAYTNSQLVELEKEFHFSHYLCRPRRIELAQGLGLTERQIKIWFQNRRMKFKKEQKQ 428
Query: 67 R 67
+
Sbjct: 429 K 429
>gi|319429384|gb|ADV56967.1| homeodomain protein HoxD3a [Hypophthalmichthys nobilis]
Length = 284
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 145 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 204
Query: 69 EVVIKDP-------SKDLFLSNKVMYTYLVFQV 94
++ P S L SN + Y+ + V
Sbjct: 205 --IMHSPLGHSPDRSPPLSGSNHIGYSGQLPNV 235
>gi|20339637|gb|AAM19472.1|AF410914_1 HoxL5/6 homeobox [Petromyzon marinus]
Length = 60
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R YS Q LELEKEFH++RY+T RR+ E+A+SL L+ERQ+KIWFQNRR K +K+
Sbjct: 5 RTAYSRYQTLELEKEFHFNRYLTRRRRVEIAHSLCLTERQIKIWFQNRRMKWKKE 59
>gi|224460203|gb|ACN43631.1| sex combs reduced [Rhodnius prolixus]
Length = 338
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 254 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKMAS 313
Query: 69 EVVIK 73
VI
Sbjct: 314 MNVIP 318
>gi|195389692|ref|XP_002053510.1| antennapedia [Drosophila virilis]
gi|194151596|gb|EDW67030.1| antennapedia [Drosophila virilis]
Length = 376
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 299 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 358
Query: 69 E 69
E
Sbjct: 359 E 359
>gi|154183844|gb|ABS70783.1| Hoxb5b [Haplochromis burtoni]
Length = 293
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K +
Sbjct: 222 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 281
Query: 69 EVVIKDPS 76
++ S
Sbjct: 282 MSLVTGGS 289
>gi|383209610|emb|CCE45703.1| antennapedia [Parasteatoda tepidariorum]
Length = 327
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 242 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKSKM 301
Query: 69 EVVI 72
E +
Sbjct: 302 EAGL 305
>gi|327263836|ref|XP_003216723.1| PREDICTED: homeobox protein Hox-C5-like [Anolis carolinensis]
Length = 234
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK--QLKK 66
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K +LK
Sbjct: 171 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLKS 230
Query: 67 REEV 70
+E +
Sbjct: 231 KESL 234
>gi|319429390|gb|ADV56970.1| homeodomain protein HoxD3a [Ochetobius elongatus]
Length = 296
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 157 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 216
Query: 69 EVVIKDP-------SKDLFLSNKVMYTYLVFQVK 95
++ P S L SN + Y+ + V
Sbjct: 217 --IMHSPLGHSPDRSPPLSGSNHIGYSGQLPNVN 248
>gi|220898182|gb|ACL81438.1| HoxA6 [Latimeria menadoensis]
Length = 230
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 156 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESK 212
>gi|193905|gb|AAA37832.1| Hox-3.3 protein, partial [Mus musculus]
Length = 103
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 13 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 67
>gi|157831140|pdb|1FTZ|A Chain A, Nuclear Magnetic Resonance Solution Structure Of The
Fushi Tarazu Homeodomain From Drosophila And Comparison
With The Antennapedia Homeodomain
Length = 70
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 7 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 60
>gi|411125405|gb|AFW04347.1| Deformed, partial [Laccocoris sp. 1 ML-2012]
Length = 152
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 4 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 57
>gi|151935663|gb|ABS18813.1| Hox6 [Flaccisagitta enflata]
Length = 145
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ ++A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 40 RQTYTRYQTLELEKEFHFNRYLTRRRRIDIAHALCLTERQIKIWFQNRRMKWKKEQKAAL 99
Query: 69 EVVIKDPS 76
V + P
Sbjct: 100 GVGMPGPG 107
>gi|88604714|gb|ABD46728.1| homeobox protein sex comb reduced [Endeis spinosa]
Length = 265
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRA---KERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR KE KQL
Sbjct: 184 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKEHKQLP 243
Query: 66 K 66
Sbjct: 244 G 244
>gi|41581558|gb|AAS07620.1| homeobox protein Lox6, partial [Perionyx excavatus]
Length = 77
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRR 57
R YS Q LELEKEFH++RY+T RR+ E+A+SLGL+ERQ+KIWFQNRR
Sbjct: 29 RTSYSRYQTLELEKEFHFNRYLTGRRRLEIAHSLGLTERQIKIWFQNRR 77
>gi|387231849|gb|AFJ72635.1| homeobox C6, partial [Neophocaena phocaenoides]
gi|387231851|gb|AFJ72636.1| homeobox C6, partial [Balaenoptera physalus]
Length = 101
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 11 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 65
>gi|47971132|dbj|BAD22523.1| LjHox4w Homeobox [Lethenteron camtschaticum]
Length = 87
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K K
Sbjct: 28 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKDHK 84
>gi|354479669|ref|XP_003502032.1| PREDICTED: homeobox protein Hox-A7-like [Cricetulus griseus]
Length = 233
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 136 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDES 195
Query: 69 EVVIKDP 75
+ P
Sbjct: 196 QAPTAAP 202
>gi|170029589|ref|XP_001842674.1| homeotic deformed protein [Culex quinquefasciatus]
gi|167863993|gb|EDS27376.1| homeotic deformed protein [Culex quinquefasciatus]
Length = 247
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 30 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 83
>gi|410952526|ref|XP_003982930.1| PREDICTED: homeobox protein Hox-A6 isoform 2 [Felis catus]
Length = 249
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 159 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 215
>gi|17223058|gb|AAL36906.1|AF435001_1 Hox3 [Lithobius atkinsoni]
Length = 356
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 43/55 (78%)
Query: 16 QRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKREEV 70
Q +ELEKEFH++RY+ R+ ELA LGL++RQ+KIWFQNRR K +K+LK RE
Sbjct: 3 QLVELEKEFHFNRYLCRPRRVELAKQLGLTDRQIKIWFQNRRMKYKKELKHREGC 57
>gi|3445428|emb|CAA07498.1| homeobox protein [Cupiennius salei]
Length = 263
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 138 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 191
>gi|426355750|ref|XP_004045271.1| PREDICTED: homeobox protein Hox-A7 [Gorilla gorilla gorilla]
Length = 230
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 134 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDEG 193
Query: 69 EVVIKDP 75
P
Sbjct: 194 PTAAAAP 200
>gi|411125399|gb|AFW04344.1| Deformed, partial [Nerthra indica]
Length = 152
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 4 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 57
>gi|348522805|ref|XP_003448914.1| PREDICTED: homeobox protein Hox-A5-like [Oreochromis niloticus]
Length = 281
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 209 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 265
>gi|285206857|gb|ADC35160.1| deformed [Pachygrontha nigriventris]
Length = 165
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY++Y+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 4 RTAYTRHQILELEKEFHYNKYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 57
>gi|301614396|ref|XP_002936695.1| PREDICTED: homeobox protein Hox-C5-like [Xenopus (Silurana)
tropicalis]
Length = 224
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K K
Sbjct: 161 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDTK 217
>gi|242011836|ref|XP_002426650.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212510814|gb|EEB13912.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 356
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 267 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMAS 326
Query: 69 EVVIK 73
V+
Sbjct: 327 MNVVP 331
>gi|225543572|ref|NP_571200.1| homeobox protein Hox-D3a [Danio rerio]
gi|223590219|sp|O42370.2|HXD3A_DANRE RecName: Full=Homeobox protein Hox-D3a; Short=Hox-D3
Length = 396
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 9/87 (10%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 165 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKG 224
Query: 69 EVVIKDP-------SKDLFLSNKVMYT 88
++ P S L SN + Y+
Sbjct: 225 --IMHSPLGHSPDRSPPLSGSNHIGYS 249
>gi|45553289|ref|NP_996171.1| antennapedia, isoform N [Drosophila melanogaster]
gi|45553295|ref|NP_996174.1| antennapedia, isoform D [Drosophila melanogaster]
gi|195344085|ref|XP_002038619.1| GM10522 [Drosophila sechellia]
gi|195568836|ref|XP_002102418.1| GD19515 [Drosophila simulans]
gi|45446389|gb|AAS65109.1| antennapedia, isoform D [Drosophila melanogaster]
gi|45446390|gb|AAS65110.1| antennapedia, isoform N [Drosophila melanogaster]
gi|194133640|gb|EDW55156.1| GM10522 [Drosophila sechellia]
gi|194198345|gb|EDX11921.1| GD19515 [Drosophila simulans]
Length = 374
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 297 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 356
Query: 69 E 69
E
Sbjct: 357 E 357
>gi|47971148|dbj|BAD22531.1| LjHox5w Homeobox [Lethenteron camtschaticum]
Length = 85
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +K
Sbjct: 26 RTAYTRYQTLELEKEFHFNRYLTRRRRIEVANALCLSERQIKIWFQNRRMKWKK 79
>gi|195498909|ref|XP_002096727.1| GE25826 [Drosophila yakuba]
gi|194182828|gb|EDW96439.1| GE25826 [Drosophila yakuba]
Length = 375
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 298 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 357
Query: 69 E 69
E
Sbjct: 358 E 358
>gi|194899155|ref|XP_001979126.1| antp [Drosophila erecta]
gi|190650829|gb|EDV48084.1| antp [Drosophila erecta]
Length = 374
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 297 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 356
Query: 69 E 69
E
Sbjct: 357 E 357
>gi|285206849|gb|ADC35156.1| deformed [Lygaeus equestris]
Length = 171
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY++Y+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 4 RTAYTRHQILELEKEFHYNKYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 57
>gi|8650523|gb|AAF78248.1|AF275310_1 Hox5 [Haliotis rufescens]
Length = 281
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 6/77 (7%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFHY++Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 200 RTSYTRHQTLELEKEFHYNKYLTRRRRIEIAHALNLTERQIKIWFQNRRMKWKKEHK--- 256
Query: 69 EVVIKDPSKDLFLSNKV 85
+ +K++ L+N +
Sbjct: 257 ---LSHIAKNMNLANAL 270
>gi|317419675|emb|CBN81712.1| Homeobox protein Hox-B5b [Dicentrarchus labrax]
Length = 287
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K +
Sbjct: 216 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 275
Query: 69 EVVIKDPS 76
++ S
Sbjct: 276 MSLVTGGS 283
>gi|195038411|ref|XP_001990653.1| GH19475 [Drosophila grimshawi]
gi|193894849|gb|EDV93715.1| GH19475 [Drosophila grimshawi]
Length = 385
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 308 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 367
Query: 69 E 69
E
Sbjct: 368 E 368
>gi|410895281|ref|XP_003961128.1| PREDICTED: homeobox protein Hox-B5b-like [Takifugu rubripes]
gi|119370786|sp|Q1KKX0.1|HXB5B_FUGRU RecName: Full=Homeobox protein Hox-B5b
gi|94482807|gb|ABF22424.1| homeobox protein HoxB5b [Takifugu rubripes]
Length = 280
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K +
Sbjct: 209 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 268
Query: 69 EVVIKDPS 76
++ S
Sbjct: 269 MSLVTGGS 276
>gi|154183830|gb|ABS70770.1| Hoxa5a [Haplochromis burtoni]
Length = 281
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 209 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 265
>gi|45553279|ref|NP_996166.1| antennapedia, isoform K [Drosophila melanogaster]
gi|45553293|ref|NP_996173.1| antennapedia, isoform G [Drosophila melanogaster]
gi|45446385|gb|AAS65105.1| antennapedia, isoform G [Drosophila melanogaster]
gi|45446386|gb|AAS65106.1| antennapedia, isoform K [Drosophila melanogaster]
Length = 361
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K +
Sbjct: 284 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG 343
Query: 69 E 69
E
Sbjct: 344 E 344
>gi|411125385|gb|AFW04337.1| Deformed, partial [Cicadidae sp. 1 ML-2012]
Length = 176
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 4 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 57
>gi|285206859|gb|ADC35161.1| deformed [Heterogaster chinensis]
Length = 166
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFHY++Y+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 4 RTAYTRHQILELEKEFHYNKYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 57
>gi|34484445|gb|AAQ72845.1| Hoxb5b [Sphoeroides nephelus]
Length = 280
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K +
Sbjct: 209 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 268
Query: 69 EVVIKDPS 76
++ S
Sbjct: 269 MSLVTGGS 276
>gi|214243|gb|AAA49743.1| AC1 protein, partial [Xenopus laevis]
Length = 67
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+
Sbjct: 12 RQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 66
>gi|432871986|ref|XP_004072060.1| PREDICTED: homeobox protein Hox-B5a-like, partial [Oryzias latipes]
Length = 294
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K K +
Sbjct: 222 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKD-NKVK 280
Query: 69 EVVIKDPSKDLF 80
+ I P F
Sbjct: 281 SMSITAPGASHF 292
>gi|411125401|gb|AFW04345.1| Deformed, partial [Sigara striata]
Length = 162
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 4 RTAYTRHQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 57
>gi|301612427|ref|XP_002935734.1| PREDICTED: homeobox protein Hox-D3 [Xenopus (Silurana) tropicalis]
Length = 415
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 9/87 (10%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q +ELEKEFH++RY+ R+ E+AN L L+ERQ+KIWFQNRR K +K K +
Sbjct: 184 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 243
Query: 69 EVVIKDP-------SKDLFLSNKVMYT 88
++ P S L SN V Y+
Sbjct: 244 --IMHSPAGQSPDRSPTLSGSNHVGYS 268
>gi|301607693|ref|XP_002933441.1| PREDICTED: homeobox protein Hox-A9-like [Xenopus (Silurana)
tropicalis]
Length = 487
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+AN+L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 409 RQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESKL-- 466
Query: 69 EVVIKDPSKD 78
++ PS D
Sbjct: 467 -LLPSHPSDD 475
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 41/49 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRR 57
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR
Sbjct: 190 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR 238
>gi|157124733|ref|XP_001660498.1| homeotic deformed protein, putative [Aedes aegypti]
gi|108873902|gb|EAT38127.1| AAEL009950-PA [Aedes aegypti]
Length = 381
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 181 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 237
>gi|2739071|gb|AAB94604.1| homeobox transcription factor HOXA7 [Homo sapiens]
gi|3097078|emb|CAA06713.1| hoxA7 [Homo sapiens]
gi|208966494|dbj|BAG73261.1| homeobox A7 [synthetic construct]
Length = 230
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 134 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDEG 193
Query: 69 EVVIKDP 75
P
Sbjct: 194 PTAAAAP 200
>gi|307213515|gb|EFN88924.1| Homeotic protein deformed [Harpegnathos saltator]
Length = 531
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K K
Sbjct: 319 RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLTERQIKIWFQNRRMKWKKDHK 375
>gi|296202581|ref|XP_002748516.1| PREDICTED: homeobox protein Hox-B6 [Callithrix jacchus]
gi|403279477|ref|XP_003931276.1| PREDICTED: homeobox protein Hox-B6 [Saimiri boliviensis
boliviensis]
Length = 224
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ Q LELEKEFHY+RY+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+ K
Sbjct: 150 RQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 206
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,534,777,003
Number of Sequences: 23463169
Number of extensions: 90665380
Number of successful extensions: 434717
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18513
Number of HSP's successfully gapped in prelim test: 651
Number of HSP's that attempted gapping in prelim test: 389884
Number of HSP's gapped (non-prelim): 45164
length of query: 186
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 52
effective length of database: 9,215,130,721
effective search space: 479186797492
effective search space used: 479186797492
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)