BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8536
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04649|CDX2_MESAU Homeobox protein CDX-2 OS=Mesocricetus auratus GN=CDX2 PE=2 SV=1
Length = 313
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 240
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 241 RKINKKK 247
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHY 206
>sp|P46692|HMD1_CHICK Homeobox protein CHOX-CAD OS=Gallus gallus GN=CHOX-CAD1 PE=2 SV=1
Length = 248
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 133 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKE 192
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 193 RKVNKKK 199
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 158 DTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 130 SSGKTRTKDKYRVVYTDHQRLELEKEFHY 158
>sp|Q9DEB6|CDX1_CHICK Homeobox protein CDX-1 OS=Gallus gallus GN=CDX1 PE=2 SV=2
Length = 260
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKE 204
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 205 RKVNKKK 211
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 26/28 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFHY 186
+ KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 143 SGKTRTKDKYRVVYTDHQRLELEKEFHY 170
>sp|Q99626|CDX2_HUMAN Homeobox protein CDX-2 OS=Homo sapiens GN=CDX2 PE=1 SV=3
Length = 313
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGLSERQVKIWFQNRRAKE
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE 241
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 242 RKINKKK 248
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 182 KTRTKDKYRVVYTDHQRLELEKEFHY 207
>sp|Q90X89|CDX1_XENTR Homeobox protein CDX-1 OS=Xenopus tropicalis GN=cdx1 PE=2 SV=1
Length = 262
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 62/67 (92%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRKAELA SL L+ERQVKIWFQNRRAKE
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAASLALTERQVKIWFQNRRAKE 204
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 205 RKVNKKK 211
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 145 KTRTKDKYRVVYTDHQRLELEKEFHY 170
>sp|P18111|CDX1_MOUSE Homeobox protein CDX-1 OS=Mus musculus GN=Cdx1 PE=2 SV=2
Length = 268
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RKQLKKR 67
RK KK+
Sbjct: 210 RKVNKKK 216
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>sp|P47902|CDX1_HUMAN Homeobox protein CDX-1 OS=Homo sapiens GN=CDX1 PE=2 SV=2
Length = 265
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>sp|A2T7H5|CDX1_PONPY Homeobox protein CDX-1 OS=Pongo pygmaeus GN=CDX1 PE=3 SV=1
Length = 265
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 209
Query: 61 RK 62
RK
Sbjct: 210 RK 211
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 150 KTRTKDKYRVVYTDHQRLELEKEFHY 175
>sp|P43241|CDX2_MOUSE Homeobox protein CDX-2 OS=Mus musculus GN=Cdx2 PE=1 SV=1
Length = 311
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/66 (87%), Positives = 62/66 (93%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFH+SRYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHFSRYITIRRKSELAATLGLSERQVKIWFQNRRAKE 240
Query: 61 RKQLKK 66
RK KK
Sbjct: 241 RKIKKK 246
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFH+
Sbjct: 181 KTRTKDKYRVVYTDHQRLELEKEFHF 206
>sp|Q05095|CDX1_RAT Homeobox protein CDX-1 (Fragment) OS=Rattus norvegicus GN=Cdx1
PE=2 SV=1
Length = 123
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 60/62 (96%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKEFHYSRYITIRRK+ELA +LGL+ERQVKIWFQNRRAKE
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKE 60
Query: 61 RK 62
RK
Sbjct: 61 RK 62
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFHY 186
KTRTKDKYRVVY+D QRLELEKEFHY
Sbjct: 1 KTRTKDKYRVVYTDHQRLELEKEFHY 26
>sp|Q07424|CDX4_MOUSE Homeobox protein CDX-4 OS=Mus musculus GN=Cdx4 PE=2 SV=1
Length = 282
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 167 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKE 226
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 227 RKMIKKK 233
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 165 TGKTRTKEKYRVVYTDHQRLELEKEFH 191
>sp|O14627|CDX4_HUMAN Homeobox protein CDX-4 OS=Homo sapiens GN=CDX4 PE=2 SV=1
Length = 284
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTK+KYRVVY+D QRLELEKEFH +RYITI+RK+ELA +LGLSERQVKIWFQNRRAKE
Sbjct: 169 KTRTKEKYRVVYTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKE 228
Query: 61 RKQLKKR 67
RK +KK+
Sbjct: 229 RKMIKKK 235
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 159 TRKTRTKDKYRVVYSDQQRLELEKEFH 185
T KTRTK+KYRVVY+D QRLELEKEFH
Sbjct: 167 TGKTRTKEKYRVVYTDHQRLELEKEFH 193
>sp|Q91622|CDX1_XENLA Homeobox protein CDX-1 OS=Xenopus laevis GN=cdx1 PE=2 SV=1
Length = 263
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 58/62 (93%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
DKYRVVY+D QRLELEKEFHYSRYITIRRKAELA +LGL+ERQVKIWFQNRRAKERK K
Sbjct: 151 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVNK 210
Query: 66 KR 67
K+
Sbjct: 211 KK 212
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 166 DKYRVVYSDQQRLELEKEFHY 186
DKYRVVY+D QRLELEKEFHY
Sbjct: 151 DKYRVVYTDHQRLELEKEFHY 171
>sp|P09085|CAD_DROME Homeotic protein caudal OS=Drosophila melanogaster GN=cad PE=1 SV=4
Length = 427
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
KTRTKDKYRVVY+D QRLELEKE+ SRYITIRRK+ELA +L LSERQVKIWFQNRRAKE
Sbjct: 269 KTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 328
Query: 61 RKQLKKREEVVI 72
RKQ KK + +
Sbjct: 329 RKQNKKGSDPNV 340
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 152 SYILDIDTRKTRTKDKYRVVYSDQQRLELEKEF 184
+Y KTRTKDKYRVVY+D QRLELEKE+
Sbjct: 260 AYPAQPQPGKTRTKDKYRVVYTDFQRLELEKEY 292
>sp|P81193|CDX_LINSA Homeobox protein CDX (Fragment) OS=Lineus sanguineus GN=CDX PE=3
SV=1
Length = 70
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Query: 6 DKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
DKYRVVY+D QRLELEKEFHYSRYIT+ RKAELA SL L+ERQ+KIWFQNRRAKERK +
Sbjct: 2 DKYRVVYTDYQRLELEKEFHYSRYITMNRKAELAKSLDLTERQIKIWFQNRRAKERK-IN 60
Query: 66 KREEVVIKDP 75
K+++V++K+P
Sbjct: 61 KKKDVMVKEP 70
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 166 DKYRVVYSDQQRLELEKEFHY 186
DKYRVVY+D QRLELEKEFHY
Sbjct: 2 DKYRVVYTDYQRLELEKEFHY 22
>sp|Q02814|HMD2_CHICK Homeobox protein CHOX-CAD2 (Fragment) OS=Gallus gallus
GN=CHOX-CAD2 PE=2 SV=1
Length = 60
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 54/58 (93%)
Query: 5 KDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
K+KYRVVY+D QRLELEKEFH +RYITIRRK+ELA +LGLSERQVK WFQNRRAKERK
Sbjct: 1 KEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAKERK 58
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 165 KDKYRVVYSDQQRLELEKEFH 185
K+KYRVVY+D QRLELEKEFH
Sbjct: 1 KEKYRVVYTDHQRLELEKEFH 21
>sp|P34766|PAL1_CAEEL Homeobox protein pal-1 OS=Caenorhabditis elegans GN=pal-1 PE=1 SV=2
Length = 270
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 202 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 261
Query: 61 RKQLKK 66
R+ +K
Sbjct: 262 RRDKQK 267
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 161 KTRTKDKYRVVYSDQQRLELEKEFH 185
+ RT DKYR+VYSD QRLELEKEFH
Sbjct: 202 RVRTADKYRMVYSDYQRLELEKEFH 226
>sp|A8XSQ8|PAL1_CAEBR Homeobox protein pal-1 OS=Caenorhabditis briggsae GN=pal-1 PE=3
SV=1
Length = 271
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 KTRTKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKE 60
+ RT DKYR+VYSD QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQNRRAK+
Sbjct: 203 RVRTADKYRMVYSDYQRLELEKEFHTSAFITSDRKSQLSTMLSLTERQIKIWFQNRRAKD 262
Query: 61 RKQLKK 66
R+ +K
Sbjct: 263 RRDKQK 268
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 145 SSETTATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFH 185
SS+T + + + RT DKYR+VYSD QRLELEKEFH
Sbjct: 187 SSDTKSLPTGPGTNNVRVRTADKYRMVYSDYQRLELEKEFH 227
>sp|P09070|HXB4_XENLA Homeobox protein Hox-B4 OS=Xenopus laevis GN=hoxb4 PE=2 SV=1
Length = 232
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 145 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHKLPN 204
Query: 69 EVVIKDPSKDLFLSN 83
+ +PS +L ++
Sbjct: 205 TKIKSNPSVNLQIAG 219
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 6/37 (16%)
Query: 150 ATSYILDIDTRKTRTKDKYRVVYSDQQRLELEKEFHY 186
ATS D + +++RT Y+ QQ LELEKEFHY
Sbjct: 132 ATSTYSDGEAKRSRT------AYTRQQVLELEKEFHY 162
>sp|P07548|DFD_DROME Homeotic protein deformed OS=Drosophila melanogaster GN=Dfd PE=1
SV=2
Length = 586
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
+ R Y+ Q LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 368 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426
>sp|P14840|HXB4_CHICK Homeobox protein Hox-B4 OS=Gallus gallus GN=HOXB4 PE=2 SV=1
Length = 245
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K K
Sbjct: 154 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKKDHK 210
Score = 31.2 bits (69), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 154 RTAYTRQQVLELEKEFHY 171
>sp|P09080|HMB1_TRIGR Homeobox protein HB1 (Fragment) OS=Tripneustes gratilla PE=2 SV=3
Length = 307
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 51/65 (78%)
Query: 7 KYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
+ R Y+ Q LELEKEFH++RY+T RR+ EL++ LGL+ERQ+KIWFQNRR K +K+ K
Sbjct: 191 RCRQTYTRYQTLELEKEFHFNRYLTRRRRIELSHLLGLTERQIKIWFQNRRMKYKKESKN 250
Query: 67 REEVV 71
+EE V
Sbjct: 251 KEEGV 255
>sp|P22574|HXB4A_DANRE Homeobox protein Hox-B4a OS=Danio rerio GN=hoxb4a PE=2 SV=3
Length = 246
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 155 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 211
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 155 RTAYTRQQVLELEKEFHY 172
>sp|O13074|HXB4A_TAKRU Homeobox protein Hox-B4a OS=Takifugu rubripes GN=hoxb4a PE=3 SV=2
Length = 288
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 164 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKKDHK 220
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 164 RTAYTRQQVLELEKEFHY 181
>sp|Q08624|HXC4_MOUSE Homeobox protein Hox-C4 OS=Mus musculus GN=Hoxc4 PE=2 SV=1
Length = 264
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
Score = 31.2 bits (69), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 160 RTAYTRQQVLELEKEFHY 177
>sp|P09017|HXC4_HUMAN Homeobox protein Hox-C4 OS=Homo sapiens GN=HOXC4 PE=2 SV=2
Length = 264
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 160 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 160 RTAYTRQQVLELEKEFHY 177
>sp|P10178|HMB3_TRIGR Homeobox protein HB3 (Fragment) OS=Tripneustes gratilla PE=3 SV=1
Length = 108
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R Y+ QQ LELEKEFH+SRY+T RR+ E+A SLGLSERQ+KIWFQNRR K +++
Sbjct: 31 RQTYTRQQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWKRE 85
>sp|Q9PWD2|HXA4_MORSA Homeobox protein Hox-A4 OS=Morone saxatilis GN=hoxa4 PE=3 SV=1
Length = 248
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K+ K
Sbjct: 153 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHK 209
>sp|Q1KL13|HXA4A_TAKRU Homeobox protein Hox-A4a OS=Takifugu rubripes GN=hoxa4a PE=3 SV=1
Length = 255
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K+ K
Sbjct: 153 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKEHK 209
>sp|Q08DG5|HXB4_BOVIN Homeobox protein Hox-B4 OS=Bos taurus GN=HOXB4 PE=2 SV=1
Length = 251
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 166 RTAYTRQQVLELEKEFHY 183
>sp|P10284|HXB4_MOUSE Homeobox protein Hox-B4 OS=Mus musculus GN=Hoxb4 PE=2 SV=1
Length = 250
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 165 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 221
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 165 RTAYTRQQVLELEKEFHY 182
>sp|P06798|HXA4_MOUSE Homeobox protein Hox-A4 OS=Mus musculus GN=Hoxa4 PE=2 SV=4
Length = 285
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 184 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 240
>sp|P17483|HXB4_HUMAN Homeobox protein Hox-B4 OS=Homo sapiens GN=HOXB4 PE=1 SV=2
Length = 251
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 166 RTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHK 222
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 166 RTAYTRQQVLELEKEFHY 183
>sp|Q9PWM5|HXC6B_DANRE Homeobox protein Hox-C6b OS=Danio rerio GN=hoxc6b PE=2 SV=1
Length = 227
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
R +YS Q LELEKEFHY+RY+T RR+ E+AN+L LSERQ+KIWFQNRR K +K+
Sbjct: 139 RQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKE 193
>sp|Q00056|HXA4_HUMAN Homeobox protein Hox-A4 OS=Homo sapiens GN=HOXA4 PE=1 SV=3
Length = 320
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 219 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 275
>sp|Q9PWM3|HXC4A_DANRE Homeobox protein Hox-C4a OS=Danio rerio GN=hoxc4a PE=2 SV=1
Length = 268
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A+SL LSERQ+KIWFQNRR K +K
Sbjct: 158 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 211
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 158 RTAYTRQQVLELEKEFHY 175
>sp|Q9PWL5|HXA4A_DANRE Homeobox protein Hox-A4a OS=Danio rerio GN=hoxa4a PE=2 SV=2
Length = 245
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A+++ LSERQVKIWFQNRR K +K K
Sbjct: 151 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKKDHK 207
>sp|P10105|LAB_DROME Homeotic protein labial OS=Drosophila melanogaster GN=lab PE=1 SV=2
Length = 635
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 48/58 (82%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKK 66
R ++++Q ELEKEFH++RY+T R+ E+AN+L L+E QVKIWFQNRR K++K++K+
Sbjct: 511 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKE 568
>sp|P29555|ABDA_DROME Homeobox protein abdominal-A OS=Drosophila melanogaster GN=abd-A
PE=2 SV=2
Length = 590
Score = 77.8 bits (190), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLKKRE 68
R Y+ Q LELEKEFH++ Y+T RR+ E+A++L L+ERQ+KIWFQNRR K +K+L+ +
Sbjct: 402 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVK 461
Query: 69 EV 70
E+
Sbjct: 462 EI 463
>sp|Q9IA22|HXA4_HETFR Homeobox protein Hox-A4 OS=Heterodontus francisci GN=HOXA4 PE=3
SV=1
Length = 247
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 153 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 209
>sp|P17277|HXA4_CHICK Homeobox protein Hox-A4 OS=Gallus gallus GN=HOXA4 PE=2 SV=1
Length = 309
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQVKIWFQNRR K +K K
Sbjct: 213 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 269
>sp|A2D5I1|HXD4_LAGLA Homeobox protein Hox-D4 OS=Lagothrix lagotricha GN=HOXD4 PE=3 SV=1
Length = 255
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>sp|A2D4P8|HXD4_ATEGE Homeobox protein Hox-D4 OS=Ateles geoffroyi GN=HOXD4 PE=3 SV=1
Length = 255
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>sp|P10628|HXD4_MOUSE Homeobox protein Hox-D4 OS=Mus musculus GN=Hoxd4 PE=2 SV=3
Length = 250
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 212
>sp|A1YFD8|HXD4_SAGLB Homeobox protein Hox-D4 OS=Saguinus labiatus GN=HOXD4 PE=3 SV=1
Length = 255
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>sp|Q9PWD4|HXA7_MORSA Homeobox protein Hox-A7 OS=Morone saxatilis GN=hoxa7 PE=3 SV=1
Length = 225
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 4 TKDKYRVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQ 63
T+ + R YS Q LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 125 TRKRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 184
Query: 64 LKKREEVVIKDPSKDL 79
K E V KD
Sbjct: 185 -HKEEPVSTPSGEKDC 199
>sp|Q1KKU6|HXC4A_TAKRU Homeobox protein Hox-C4a OS=Takifugu rubripes GN=hoxc4a PE=3 SV=1
Length = 264
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ QQ LELEKEFHY+RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K
Sbjct: 159 RTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHALVLSERQIKIWFQNRRMKWKK 212
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 169 RVVYSDQQRLELEKEFHY 186
R Y+ QQ LELEKEFHY
Sbjct: 159 RTAYTRQQVLELEKEFHY 176
>sp|A2T6X6|HXD4_PANTR Homeobox protein Hox-D4 OS=Pan troglodytes GN=HOXD4 PE=3 SV=1
Length = 255
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>sp|A1YFY3|HXD4_PANPA Homeobox protein Hox-D4 OS=Pan paniscus GN=HOXD4 PE=3 SV=1
Length = 255
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERKQLK 65
R Y+ QQ LELEKEFH++RY+T RR+ E+A++L LSERQ+KIWFQNRR K +K K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHK 214
>sp|P02835|FTZ_DROME Segmentation protein fushi tarazu OS=Drosophila melanogaster GN=ftz
PE=1 SV=2
Length = 410
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 9 RVVYSDQQRLELEKEFHYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKERK 62
R Y+ Q LELEKEFH++RYIT RR+ ++AN+L LSERQ+KIWFQNRR K +K
Sbjct: 258 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,369,184
Number of Sequences: 539616
Number of extensions: 2254824
Number of successful extensions: 11475
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 8404
Number of HSP's gapped (non-prelim): 3123
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)