Diaphorina citri psyllid: psy8538


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MDSLEFHYSRYITIRRKAELANSLGLSERQVRCPHHQLTTVNNNTAIIVSFLEKVHGDGRNSSR
cccccEEccHHHHHHHHHHHHHHccccccCECccccccccccccHHHHHHHHHHHccccccccc
*DSLEFHYSRYITIRRKAELANSLGLSERQVRCPHHQLTTVNNNTAIIVSFLEKV*********
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MDSLEFHYSRYITIRRKAELANSLGLSERQVRCPHHQLTTVNNNTAIIVSFLEKVHGDGRNSSR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Homeobox protein CDX-2 Involved in the transcriptional regulation of multiple genes expressed in the intestinal epithelium. Important in broad range of functions from early differentiation to maintenance of the intestinal epithelial lining of both the small and large intestine.confidentQ99626
Homeobox protein CDX-1 Could play a role in the terminal differentiation of the intestine.confidentP18111

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0048522 [BP]positive regulation of cellular processconfidentGO:0048518, GO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0006357 [BP]regulation of transcription from RNA polymerase II promoterconfidentGO:0009889, GO:0019219, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0006355, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0009948 [BP]anterior/posterior axis specificationprobableGO:0032502, GO:0007389, GO:0032501, GO:0009952, GO:0044707, GO:0008150, GO:0003002, GO:0009798, GO:0007275, GO:0044699
GO:0000122 [BP]negative regulation of transcription from RNA polymerase II promoterprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0006357, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0045892, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0008150, GO:0010558, GO:0048523
GO:0008284 [BP]positive regulation of cell proliferationprobableGO:0042127, GO:0050794, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:0000794 [CC]condensed nuclear chromosomeprobableGO:0031974, GO:0043229, GO:0043228, GO:0000228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005634, GO:0005694, GO:0000793, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044422
GO:0001568 [BP]blood vessel developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0001944, GO:0044767, GO:0072359, GO:0072358, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0017053 [CC]transcriptional repressor complexprobableGO:0043234, GO:0044446, GO:0032991, GO:0005575, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0060711 [BP]labyrinthine layer developmentprobableGO:0032502, GO:0001701, GO:0044707, GO:0048568, GO:0032501, GO:0048856, GO:0044767, GO:0009790, GO:0048513, GO:0008150, GO:0044699, GO:0009792, GO:0048731, GO:0043009, GO:0001892, GO:0007275, GO:0001890
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0003714 [MF]transcription corepressor activityprobableGO:0003674, GO:0003712, GO:0000989, GO:0000988
GO:0045944 [BP]positive regulation of transcription from RNA polymerase II promoterprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0051171, GO:0009891, GO:2000112, GO:0019219, GO:0010556, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0045893, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0006357, GO:0048522
GO:0048103 [BP]somatic stem cell divisionprobableGO:0009987, GO:0008150, GO:0051301, GO:0044763, GO:0017145, GO:0044699
GO:0001756 [BP]somitogenesisprobableGO:0032502, GO:0007389, GO:0044699, GO:0032501, GO:0009952, GO:0044707, GO:0048856, GO:0007275, GO:0044767, GO:0009790, GO:0009792, GO:0008150, GO:0003002, GO:0043009, GO:0009653, GO:0035282, GO:0048646, GO:0061053
GO:0007443 [BP]Malpighian tubule morphogenesisprobableGO:0032502, GO:0061326, GO:0048619, GO:0055123, GO:0009790, GO:0048565, GO:0009653, GO:0007275, GO:0044699, GO:0002009, GO:0048513, GO:0048729, GO:0060562, GO:0048598, GO:0061333, GO:0032501, GO:0035239, GO:0060429, GO:0009888, GO:0044767, GO:0061525, GO:0008150, GO:0001655, GO:0072002, GO:0072001, GO:0007442, GO:0044707, GO:0048856, GO:0035295, GO:0048731, GO:0048546
GO:0002686 [BP]negative regulation of leukocyte migrationprobableGO:0030336, GO:0040013, GO:0030334, GO:2000145, GO:0065007, GO:0051271, GO:0051270, GO:0008150, GO:0040012, GO:0002685, GO:0002682, GO:0002683, GO:2000146, GO:0048519, GO:0032879, GO:0050794, GO:0050789, GO:0048523
GO:0048704 [BP]embryonic skeletal system morphogenesisprobableGO:0048705, GO:0048598, GO:0009887, GO:0048562, GO:0044707, GO:0048513, GO:0009790, GO:0048568, GO:0032501, GO:0048856, GO:0044767, GO:0001501, GO:0048706, GO:0008150, GO:0009792, GO:0048731, GO:0043009, GO:0009653, GO:0032502, GO:0007275, GO:0044699
GO:0007350 [BP]blastoderm segmentationprobableGO:0032502, GO:0007389, GO:0032501, GO:0009880, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0003002, GO:0035282, GO:0007275, GO:0044699
GO:0048793 [BP]pronephros developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0001822, GO:0044767, GO:0048513, GO:0008150, GO:0001655, GO:0048731, GO:0072001, GO:0007275, GO:0044699
GO:0048384 [BP]retinoic acid receptor signaling pathwayprobableGO:0044700, GO:0051716, GO:0030522, GO:0050896, GO:0009987, GO:0050794, GO:0008150, GO:0065007, GO:0044763, GO:0007165, GO:0023052, GO:0007154, GO:0050789, GO:0044699
GO:0060349 [BP]bone morphogenesisprobableGO:0048705, GO:0032502, GO:0009887, GO:0032501, GO:0044707, GO:0048856, GO:0060348, GO:0044767, GO:0001501, GO:0048513, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0001889 [BP]liver developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0061008, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0045446 [BP]endothelial cell differentiationprobableGO:0032502, GO:0060429, GO:0003158, GO:0030154, GO:0009888, GO:0008150, GO:0044763, GO:0048869, GO:0030855, GO:0009987, GO:0044699, GO:0048856
GO:0043065 [BP]positive regulation of apoptotic processprobableGO:0050794, GO:0050789, GO:0048518, GO:0043067, GO:0065007, GO:0010942, GO:0008150, GO:0010941, GO:0042981, GO:0043068, GO:0048522
GO:0008333 [BP]endosome to lysosome transportprobableGO:0016197, GO:0051234, GO:0046907, GO:0007034, GO:0006810, GO:0044765, GO:0008150, GO:0007041, GO:0051649, GO:0044763, GO:0009987, GO:0051641, GO:0051179, GO:0044699, GO:0016482
GO:0006366 [BP]transcription from RNA polymerase II promoterprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006351, GO:0019438
GO:0035019 [BP]somatic stem cell maintenanceprobableGO:0030154, GO:0048468, GO:0050789, GO:0044699, GO:0048863, GO:0048864, GO:0048869, GO:0065007, GO:0048519, GO:0032502, GO:0032501, GO:0050793, GO:0009987, GO:0050794, GO:0044767, GO:0045596, GO:0045595, GO:0008150, GO:0051093, GO:0019827, GO:0044707, GO:0048856, GO:0044763, GO:0048523
GO:0007487 [BP]analia developmentprobableGO:0032502, GO:0035215, GO:0032501, GO:0044707, GO:0007444, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0008134 [MF]transcription factor bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0045617 [BP]negative regulation of keratinocyte differentiationprobableGO:0051093, GO:0051239, GO:0050793, GO:0048519, GO:0050794, GO:0008150, GO:0045596, GO:0045595, GO:0065007, GO:0030856, GO:0030857, GO:0045605, GO:0045604, GO:0045683, GO:0045682, GO:0045616, GO:0050789, GO:0048523, GO:2000026
GO:0003705 [MF]RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activityprobableGO:0003700, GO:0003674, GO:0001071, GO:0000981
GO:2000738 [BP]positive regulation of stem cell differentiationprobableGO:2000736, GO:0051094, GO:0050793, GO:0050794, GO:0045597, GO:0045595, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:0030054 [CC]cell junctionprobableGO:0005575
GO:0001829 [BP]trophectodermal cell differentiationprobableGO:0032502, GO:0032501, GO:0001824, GO:0044707, GO:0009987, GO:0048869, GO:0001825, GO:0030154, GO:0044767, GO:0009790, GO:0001701, GO:0044763, GO:0048646, GO:0009792, GO:0008150, GO:0043009, GO:0009653, GO:0007275, GO:0044699, GO:0048856
GO:0007377 [BP]germ-band extensionprobableGO:0048598, GO:0001703, GO:0048856, GO:0044707, GO:0032501, GO:0007369, GO:0044767, GO:0009790, GO:0010004, GO:0008150, GO:0009653, GO:0032502, GO:0007275, GO:0044699
GO:0007379 [BP]segment specificationprobableGO:0032502, GO:0007389, GO:0032501, GO:0044707, GO:0008150, GO:0003002, GO:0035282, GO:0007275, GO:0044699
GO:0045656 [BP]negative regulation of monocyte differentiationprobableGO:0002761, GO:0051093, GO:0002762, GO:0045596, GO:0050793, GO:0050789, GO:0045655, GO:0050794, GO:1902105, GO:1902106, GO:0045638, GO:0065007, GO:0002682, GO:0008150, GO:0051239, GO:0048519, GO:2000026, GO:0045595, GO:0045637, GO:0048523
GO:0022603 [BP]regulation of anatomical structure morphogenesisprobableGO:0050793, GO:0008150, GO:0065007, GO:0050789
GO:0007420 [BP]brain developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007399, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699, GO:0007417
GO:0031016 [BP]pancreas developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0001706 [BP]endoderm formationprobableGO:0032502, GO:0048598, GO:0007492, GO:0048856, GO:0044707, GO:0001704, GO:0007369, GO:0009888, GO:0044767, GO:0009790, GO:0032501, GO:0008150, GO:0044699, GO:0009653, GO:0007275, GO:0048646
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0001708 [BP]cell fate specificationprobableGO:0032502, GO:0045165, GO:0048869, GO:0030154, GO:0044763, GO:0008150, GO:0009987, GO:0044699
GO:0060218 [BP]hematopoietic stem cell differentiationprobableGO:0032502, GO:0002376, GO:0048863, GO:0044707, GO:0048856, GO:0009987, GO:0048869, GO:0032501, GO:0030154, GO:0044767, GO:0048513, GO:0044763, GO:0008150, GO:0048731, GO:0030097, GO:0048534, GO:0007275, GO:0044699, GO:0002520
GO:0001953 [BP]negative regulation of cell-matrix adhesionprobableGO:0010810, GO:0030155, GO:0001952, GO:0050794, GO:0050789, GO:0007162, GO:0065007, GO:0008150, GO:0048519, GO:0010812, GO:0048523
GO:0050673 [BP]epithelial cell proliferationprobableGO:0008150, GO:0044699, GO:0008283
GO:0048617 [BP]embryonic foregut morphogenesisprobableGO:0048598, GO:0032502, GO:0007440, GO:0048565, GO:0044707, GO:0048856, GO:0055123, GO:0007275, GO:0044767, GO:0009790, GO:0032501, GO:0008150, GO:0048731, GO:0009653, GO:0048546, GO:0044699
GO:0001077 [MF]RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcriptionprobableGO:0003700, GO:0001228, GO:0003674, GO:0001071, GO:0000982, GO:0000981
GO:0010870 [BP]positive regulation of receptor biosynthetic processprobableGO:0009893, GO:0019222, GO:0009891, GO:0060255, GO:0009889, GO:0031325, GO:0031323, GO:0010604, GO:0050794, GO:0010869, GO:0010557, GO:0010556, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:0045197 [BP]establishment or maintenance of epithelial cell apical/basal polarityprobableGO:0035088, GO:0061245, GO:0009987, GO:0007163, GO:0044763, GO:0008150, GO:0044699
GO:0045647 [BP]negative regulation of erythrocyte differentiationprobableGO:0051093, GO:0050793, GO:0045646, GO:0045595, GO:0032844, GO:0050789, GO:0045596, GO:0045638, GO:0065007, GO:0002682, GO:0008150, GO:0051239, GO:0048519, GO:2000026, GO:0050794, GO:0045637, GO:0048523
GO:0000980 [MF]RNA polymerase II distal enhancer sequence-specific DNA bindingprobableGO:0005488, GO:0044212, GO:0043565, GO:0001067, GO:0003677, GO:0001012, GO:0001158, GO:0000976, GO:0000977, GO:0003676, GO:0000975, GO:0003674, GO:0097159, GO:1901363, GO:0035326
GO:0045639 [BP]positive regulation of myeloid cell differentiationprobableGO:0051094, GO:0050793, GO:0050794, GO:0045597, GO:0050789, GO:0045595, GO:0065007, GO:2000026, GO:0008150, GO:0051239, GO:0048518, GO:0002682, GO:0045637, GO:0048522
GO:0035224 [BP]genital disc anterior/posterior pattern formationprobableGO:0032502, GO:0007389, GO:0035215, GO:0048856, GO:0007447, GO:0009952, GO:0044707, GO:0007444, GO:0032501, GO:0007448, GO:0035221, GO:0044767, GO:0048513, GO:0008150, GO:0003002, GO:0048731, GO:0007275, GO:0044699
GO:0003690 [MF]double-stranded DNA bindingprobableGO:0043566, GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0021906 [BP]hindbrain-spinal cord boundary formationprobableGO:0021903, GO:0044707, GO:0021532, GO:0009790, GO:0009792, GO:0009653, GO:0007275, GO:0044699, GO:0007389, GO:0043009, GO:0048646, GO:0032502, GO:0032501, GO:0021915, GO:0044767, GO:0008150, GO:0003002, GO:0048859, GO:0009952, GO:0007399, GO:0048856, GO:0048731

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2R5Y, chain A
Confidence level:very confident
Coverage over the Query: 2-45
View the alignment between query and template
View the model in PyMOL