BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8544
(364 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1SZJ|G Chain G, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1SZJ|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1CRW|G Chain G, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
pdb|1CRW|R Chain R, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
Length = 333
Score = 508 bits (1307), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/331 (72%), Positives = 282/331 (85%)
Query: 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
KIGINGFGRIGRLVLR AL VV +NDP ++++Y+ YM KYDSTHG FKG+VK E
Sbjct: 2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDG 61
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
+VV+GKKI VF +MKPE IPWS+ GAEYIVESTGVF T + ASAH KGGAKKVII+APS
Sbjct: 62 ALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS 121
Query: 124 KDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQ 183
DAPMFVCGVNL+KY VVSNASCTTNCLAP+AKV+H+NFEI+EGLMTTVHAVTATQ
Sbjct: 122 ADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQ 181
Query: 184 KTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDL 243
KTVD PS K WR GRGA QNIIP+STGAAKAV KVIP+L+GKLTGMAFRVP PNVSVVDL
Sbjct: 182 KTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDL 241
Query: 244 TVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNK 303
TVRL + +YD+IKA +KAAS+GP++G+LGYTED+VVS DF G+ SS+FDAKAGI L+K
Sbjct: 242 TVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSK 301
Query: 304 NFVKLVTWYDNEYGYSCRVLDLIQYMKSKDT 334
FVK+V+WYDNE+GYS RV+DLI++M+ D+
Sbjct: 302 TFVKVVSWYDNEFGYSQRVIDLIKHMQKVDS 332
>pdb|1IHX|A Chain A, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|B Chain B, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|C Chain C, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|D Chain D, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHY|A Chain A, Gapdh Complexed With Adp-Ribose
pdb|1IHY|B Chain B, Gapdh Complexed With Adp-Ribose
pdb|1IHY|C Chain C, Gapdh Complexed With Adp-Ribose
pdb|1IHY|D Chain D, Gapdh Complexed With Adp-Ribose
Length = 333
Score = 506 bits (1304), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/331 (72%), Positives = 281/331 (84%)
Query: 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
KIGINGFGRIGRLVLR AL VV +NDP ++++Y+ YM KYDSTHG FKG+VK E
Sbjct: 2 KIGINGFGRIGRLVLRTALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKVEDG 61
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
+VV+GKKI VF +MKPE IPWS+ GAEYIVESTGVF T + ASAH KGGAKKVII+APS
Sbjct: 62 ALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS 121
Query: 124 KDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQ 183
DAPMFVCGVNL+KY VVSNASCTTNCLAP+AKV+H+NFEI+EGLMTTVHAVTATQ
Sbjct: 122 ADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQ 181
Query: 184 KTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDL 243
KTVD PS K WR GRGA QNIIP+STGAAKAV KVIP+L+GKLTGMAFRVP PNVSVVDL
Sbjct: 182 KTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDL 241
Query: 244 TVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNK 303
TVRL + +YD+IKA +K AS+GP++G+LGYTED+VVS DF G+ SS+FDAKAGI L+K
Sbjct: 242 TVRLGKECSYDDIKAAMKTASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSK 301
Query: 304 NFVKLVTWYDNEYGYSCRVLDLIQYMKSKDT 334
FVK+V+WYDNE+GYS RV+DLI++M+ D+
Sbjct: 302 TFVKVVSWYDNEFGYSQRVIDLIKHMQKVDS 332
>pdb|1DSS|G Chain G, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
pdb|1DSS|R Chain R, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
Length = 333
Score = 504 bits (1297), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/331 (72%), Positives = 281/331 (84%)
Query: 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
KIGINGFGRIGRLVLR AL VV +NDP ++++Y+ YM KYDSTHG FKG+VK E
Sbjct: 2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDG 61
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
+VV+GKKI VF +MKPE IPWS+ GAEYIVESTGVF T + ASAH KGGAKKVII+APS
Sbjct: 62 ALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS 121
Query: 124 KDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQ 183
DAPMFVCGVNL+KY VVSNAS TTNCLAP+AKV+H+NFEI+EGLMTTVHAVTATQ
Sbjct: 122 ADAPMFVCGVNLEKYSKDMKVVSNASXTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQ 181
Query: 184 KTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDL 243
KTVD PS K WR GRGA QNIIP+STGAAKAV KVIP+L+GKLTGMAFRVP PNVSVVDL
Sbjct: 182 KTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDL 241
Query: 244 TVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNK 303
TVRL + +YD+IKA +KAAS+GP++G+LGYTED+VVS DF G+ SS+FDAKAGI L+K
Sbjct: 242 TVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSCDFTGDNRSSIFDAKAGIQLSK 301
Query: 304 NFVKLVTWYDNEYGYSCRVLDLIQYMKSKDT 334
FVK+V+WYDNE+GYS RV+DLI++M+ D+
Sbjct: 302 TFVKVVSWYDNEFGYSQRVIDLIKHMQKVDS 332
>pdb|1GPD|G Chain G, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|1GPD|R Chain R, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 334
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/331 (71%), Positives = 282/331 (85%)
Query: 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
KIGINGFGRIGRLVLR AL VV +NDP ++++Y+ YM KYDSTHG FKG+VK E
Sbjct: 3 KIGINGFGRIGRLVLRAALSCGAQVVAVNDPFIALEYMVYMFKYDSTHGVFKGEVKMEDG 62
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
+VV+GKKI VF +MKPE IPWS+ GAEYIVESTGVF T + ASAH KGGAKKV+I+APS
Sbjct: 63 ALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVISAPS 122
Query: 124 KDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQ 183
DAPMFVCGVNL+KY +VVSNASCTTNCLAP+AKV+H+NFEI+EGLMTTVHAVTATQ
Sbjct: 123 ADAPMFVCGVNLEKYSKDMTVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQ 182
Query: 184 KTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDL 243
KTVD PS K WR GRGA QNIIP+STGAAKAV KVIP+L+GKLTGMAFRVP P+VSVVDL
Sbjct: 183 KTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPDVSVVDL 242
Query: 244 TVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNK 303
TVRL + +YD+IKA +K AS+GP++G LGYTED+VVSSDF G+ SS+FDAKAGI L+K
Sbjct: 243 TVRLGKECSYDDIKAAMKTASEGPLQGFLGYTEDDVVSSDFIGDNRSSIFDAKAGIQLSK 302
Query: 304 NFVKLVTWYDNEYGYSCRVLDLIQYMKSKDT 334
FVK+V+WYDNE+GYS RV+DL+++M+ D+
Sbjct: 303 TFVKVVSWYDNEFGYSQRVIDLLKHMQKVDS 333
>pdb|4GPD|1 Chain 1, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|2 Chain 2, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|3 Chain 3, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|4 Chain 4, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
Length = 333
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/331 (71%), Positives = 282/331 (85%)
Query: 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
KIGINGFGRIGRLVLR AL VV +NDP ++++Y+ YM KYDSTHG FKG+VK E
Sbjct: 2 KIGINGFGRIGRLVLRAALSCGAQVVAVNDPFIALEYMVYMFKYDSTHGVFKGEVKMEDG 61
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
+VV+GKKI VF +MKPE IPWS+ GAEYIVESTGVF T + ASAH KGGAKKV+I+APS
Sbjct: 62 ALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVISAPS 121
Query: 124 KDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQ 183
DAPMFVCGVNL+KY +VVSNASCTTNCLAP+AKV+H+NFEI+EGLMTTVHAVTATQ
Sbjct: 122 ADAPMFVCGVNLEKYSKDMTVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVTATQ 181
Query: 184 KTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDL 243
KTVD PS K WR GRGA QNIIP+STGAAKAV KVIP+L+GKLTGMAFRVP P+VSVVDL
Sbjct: 182 KTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPDVSVVDL 241
Query: 244 TVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNK 303
TVRL + +YD+IKA +K AS+GP++G LGYTED+VVSSDF G+ SS+FDAKAGI L+K
Sbjct: 242 TVRLGKECSYDDIKAAMKTASEGPLQGFLGYTEDDVVSSDFIGDNRSSIFDAKAGIQLSK 301
Query: 304 NFVKLVTWYDNEYGYSCRVLDLIQYMKSKDT 334
FVK+V+WYDNE+GYS RV+DL+++M+ D+
Sbjct: 302 TFVKVVSWYDNEFGYSQRVIDLLKHMQKVDS 332
>pdb|1J0X|O Chain O, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|P Chain P, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|Q Chain Q, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|R Chain R, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
Length = 332
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/331 (68%), Positives = 264/331 (79%), Gaps = 1/331 (0%)
Query: 4 KIGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
K+G+NGFGRIGRLV R A + VV INDP + + Y+ YM +YDSTHG+F G VK E
Sbjct: 2 KVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAEN 61
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+V+NGK I +FQ+ P I W GAEY+VESTGVF T + A AHLKGGAK+VII+AP
Sbjct: 62 GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAP 121
Query: 123 SKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTAT 182
S DAPMFV GVN +KYD S +VSNAS TTNCLAPLAKVIHD+F I+EGLMTTVHA+TAT
Sbjct: 122 SADAPMFVMGVNHEKYDNSLKIVSNASXTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 181
Query: 183 QKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVD 242
QKTVD PS K+WRDGRGA QNIIPASTGAAKAV KVIP+L GKLTGMAFRVP PNVSVVD
Sbjct: 182 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 241
Query: 243 LTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALN 302
LT RL YD+IK VK AS+GP+KGILGYTED+VVS DFN + SS FDA AGIALN
Sbjct: 242 LTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALN 301
Query: 303 KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKD 333
+FVKL++WYDNE+GYS RV+DL+ +M SK+
Sbjct: 302 DHFVKLISWYDNEFGYSNRVVDLMVHMASKE 332
>pdb|1ZNQ|O Chain O, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|P Chain P, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|R Chain R, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|Q Chain Q, Crsytal Structure Of Human Liver Gapdh
Length = 338
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/331 (67%), Positives = 265/331 (80%), Gaps = 1/331 (0%)
Query: 4 KIGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
K+G+NGFGRIGRLV R A + +V INDP + ++Y+ YM +YDSTHG+F G VK E
Sbjct: 8 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 67
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+V+NG I +FQ+ P +I W GAEY+VESTGVF T + A AHL+GGAK+VII+AP
Sbjct: 68 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 127
Query: 123 SKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTAT 182
S DAPMFV GVN +KYD S ++SNASCTTNCLAPLAKVIHDNF I+EGLMTTVHA+TAT
Sbjct: 128 SADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 187
Query: 183 QKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVD 242
QKTVD PS K+WRDGRGA QNIIPASTGAAKAV KVIP+L GKLTGMAFRVP NVSVVD
Sbjct: 188 QKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVD 247
Query: 243 LTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALN 302
LT RL YD+IK VK AS+GP+KGILGYTE +VVSSDFN + SS FDA AGIALN
Sbjct: 248 LTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALN 307
Query: 303 KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKD 333
+FVKL++WYDNE+GYS RV+DL+ +M SK+
Sbjct: 308 DHFVKLISWYDNEFGYSNRVVDLMAHMASKE 338
>pdb|1U8F|O Chain O, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|P Chain P, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|Q Chain Q, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|R Chain R, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
Length = 335
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/331 (67%), Positives = 265/331 (80%), Gaps = 1/331 (0%)
Query: 4 KIGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
K+G+NGFGRIGRLV R A + +V INDP + ++Y+ YM +YDSTHG+F G VK E
Sbjct: 5 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 64
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+V+NG I +FQ+ P +I W GAEY+VESTGVF T + A AHL+GGAK+VII+AP
Sbjct: 65 GKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 124
Query: 123 SKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTAT 182
S DAPMFV GVN +KYD S ++SNASCTTNCLAPLAKVIHDNF I+EGLMTTVHA+TAT
Sbjct: 125 SADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 184
Query: 183 QKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVD 242
QKTVD PS K+WRDGRGA QNIIPASTGAAKAV KVIP+L GKLTGMAFRVP NVSVVD
Sbjct: 185 QKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVD 244
Query: 243 LTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALN 302
LT RL YD+IK VK AS+GP+KGILGYTE +VVSSDFN + SS FDA AGIALN
Sbjct: 245 LTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALN 304
Query: 303 KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKD 333
+FVKL++WYDNE+GYS RV+DL+ +M SK+
Sbjct: 305 DHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335
>pdb|3H9E|A Chain A, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3H9E|B Chain B, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3PFW|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3PFW|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3H9E|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
pdb|3H9E|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
Length = 346
Score = 459 bits (1182), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/330 (65%), Positives = 266/330 (80%), Gaps = 1/330 (0%)
Query: 5 IGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNN 64
+GINGFGRIGRLVLR + + VV +NDP + +Y+ YM KYDSTHGR+KG V+
Sbjct: 10 VGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQ 69
Query: 65 IVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK 124
+VV+ +I+V+Q +P++IPW G+ Y+VESTGV+ + AS H+ GA++V+I+APS
Sbjct: 70 LVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP 129
Query: 125 DAPMFVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQ 183
DAPMFV GVN + Y+P S ++VSNASCTTNCLAPLAKVIH+ F I+EGLMTTVH+ TATQ
Sbjct: 130 DAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTATQ 189
Query: 184 KTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDL 243
KTVD PS+K WRDGRGA+QNIIPASTGAAKAV KVIP+L+GKLTGMAFRVP P+VSVVDL
Sbjct: 190 KTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDL 249
Query: 244 TVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNK 303
T RL Y IK VKAA++GPM GIL YTEDEVVS+DF G+ SS+FDAKAGIALN
Sbjct: 250 TCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALND 309
Query: 304 NFVKLVTWYDNEYGYSCRVLDLIQYMKSKD 333
NFVKL++WYDNEYGYS RV+DL++YM S+D
Sbjct: 310 NFVKLISWYDNEYGYSHRVVDLLRYMFSRD 339
>pdb|2VYN|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 334
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/331 (66%), Positives = 265/331 (80%), Gaps = 1/331 (0%)
Query: 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
K+GINGFGRIGRLVLR + + VV +NDP + +Y+ YM KYDSTHGR+KG V+ +
Sbjct: 3 KVGINGFGRIGRLVLRVCMEKGVRVVAVNDPFIDPEYMVYMFKYDSTHGRYKGTVEHKNG 62
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
+VV+ +I VFQ +P+EIPWS G Y+VE+TGV+ + + AS H+ GA++VI+TAPS
Sbjct: 63 RLVVDNLEINVFQXKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGARRVIVTAPS 122
Query: 124 KDAPMFVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTAT 182
DAPM V GVN Y+P S +VVSNAS TTNCLAPLAKVIH+ F I+EGLMTTVHA TAT
Sbjct: 123 PDAPMLVMGVNEKDYNPGSMTVVSNASXTTNCLAPLAKVIHERFGIVEGLMTTVHAYTAT 182
Query: 183 QKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVD 242
QKTVD PSKK WR GRGA+QNIIP+STGAAKAV KVIP+L GKLTGMAFRVP PNVSVVD
Sbjct: 183 QKTVDGPSKKDWRGGRGAHQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 243 LTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALN 302
LT RL +Y IK VKAA++GPM GIL YTED+VVS+DFNG+ SS+FDAKAGIALN
Sbjct: 243 LTCRLAQPASYTAIKEAVKAAAKGPMAGILAYTEDQVVSTDFNGDSHSSIFDAKAGIALN 302
Query: 303 KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKD 333
NFVKLV+WYDNEYGYS RV+DL++YM S++
Sbjct: 303 DNFVKLVSWYDNEYGYSHRVVDLLRYMFSRE 333
>pdb|3GPD|R Chain R, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
pdb|3GPD|G Chain G, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 334
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/331 (66%), Positives = 261/331 (78%), Gaps = 1/331 (0%)
Query: 4 KIGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
K+G++GFGRIGRLV R A + +V INDP + + Y+ YM +YDSTHG+F G VK E
Sbjct: 4 KVGVDGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAED 63
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+V++GK I +FQ+ PE I W G Y+VESTGVF T + A AHLKGGAK+++I+AP
Sbjct: 64 GKLVIDGKAITIFQERDPENIKWGDAGTAYVVESTGVFTTMEKAGAHLKGGAKRIVISAP 123
Query: 123 SKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTAT 182
S DAPMFV GVN KY S ++SNASCTTNCLAPLAKVIHD+F I+EGLMTTVHA+TAT
Sbjct: 124 SADAPMFVMGVNHFKYANSLKIISNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 183
Query: 183 QKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVD 242
QKTVD+PS K+WR GRGA QN+IPASTGAAKAV KVIP+L+GKLTGMAFRVP NVSV+D
Sbjct: 184 QKTVDSPSGKLWRGGRGAAQNLIPASTGAAKAVGKVIPELDGKLTGMAFRVPTANVSVLD 243
Query: 243 LTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALN 302
LT RL YD+IK VK AS+GP+KGILGYTEDEVVS DFNG SS+FDA AGI LN
Sbjct: 244 LTCRLEKPAKYDDIKKVVKEASEGPLKGILGYTEDEVVSDDFNGSNHSSIFDAGAGIELN 303
Query: 303 KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKD 333
FVKLV+WYDNE+GYS RV+DL+ +M SK+
Sbjct: 304 DTFVKLVSWYDNEFGYSERVVDLMAHMASKE 334
>pdb|1S7C|A Chain A, Crystal Structure Of Mes Buffer Bound Form Of
Glyceraldehyde 3- Phosphate Dehydrogenase From
Escherichia Coli
Length = 331
Score = 453 bits (1165), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/331 (67%), Positives = 263/331 (79%), Gaps = 4/331 (1%)
Query: 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
M K+GINGFGRIGR+V R A R + +V IND L DY+AYMLKYDSTHGRF G V+
Sbjct: 1 MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFDGTVE 59
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
+ +++VNGKKI V + P + W + G + + E+TG+F T +TA H+ GAKKV++
Sbjct: 60 VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVM 119
Query: 120 TAPSKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
T PSKD PMFV G N DKY +VSNASCTTNCLAPLAKVI+DNF I+EGLMTTVHA
Sbjct: 120 TGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHA 178
Query: 179 VTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238
TATQKTVD PS K WR GRGA+QNIIP+STGAAKAV KV+P+L GKLTGMAFRVP PNV
Sbjct: 179 TTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 238
Query: 239 SVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAG 298
SVVDLTVRL TY++IKA VKAA++G MKG+LGYTED+VVS+DFNGEVC+SVFDAKAG
Sbjct: 239 SVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAG 298
Query: 299 IALNKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
IALN NFVKLV+WYDNE GYS +VLDLI ++
Sbjct: 299 IALNDNFVKLVSWYDNETGYSNKVLDLIAHI 329
>pdb|3E6A|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
Length = 336
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/329 (66%), Positives = 268/329 (81%), Gaps = 3/329 (0%)
Query: 4 KIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFK-GDVKTE 61
KIGINGFGRIGRLV R AL + +V +NDP ++ DY+ YM KYD+ HG++K D+K +
Sbjct: 4 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIK 63
Query: 62 GNNIVVNGKK-IAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120
+ ++ G+K + VF P+EIPW++ GAEY+VESTGVF K+ A+AHLKGGAKKV+I+
Sbjct: 64 DSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVIS 123
Query: 121 APSKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVT 180
APSKDAPMFVCGVN DKY +VSNASCTTNCLAPLAKVIHDNF I+EGLMTTVHA+T
Sbjct: 124 APSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAIT 183
Query: 181 ATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSV 240
ATQKTVD PS K WR GR A+ NIIP+STGAAKAV KV+PDL GKLTGM+FRVP +VSV
Sbjct: 184 ATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSV 243
Query: 241 VDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIA 300
VDLTVR+ +YD IK+ +K+AS+G +KGI+GY E+++VS+DF G+ SS+FDAKAGIA
Sbjct: 244 VDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIA 303
Query: 301 LNKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
LN NFVKLV WYDNE+GYS RV+DLI++M
Sbjct: 304 LNDNFVKLVAWYDNEWGYSNRVIDLIRHM 332
>pdb|3E5R|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3V1Y|O Chain O, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|A Chain A, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|B Chain B, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|C Chain C, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
Length = 337
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/329 (66%), Positives = 268/329 (81%), Gaps = 3/329 (0%)
Query: 4 KIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFK-GDVKTE 61
KIGINGFGRIGRLV R AL + +V +NDP ++ DY+ YM KYD+ HG++K D+K +
Sbjct: 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIK 64
Query: 62 GNNIVVNGKK-IAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120
+ ++ G+K + VF P+EIPW++ GAEY+VESTGVF K+ A+AHLKGGAKKV+I+
Sbjct: 65 DSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVIS 124
Query: 121 APSKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVT 180
APSKDAPMFVCGVN DKY +VSNASCTTNCLAPLAKVIHDNF I+EGLMTTVHA+T
Sbjct: 125 APSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAIT 184
Query: 181 ATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSV 240
ATQKTVD PS K WR GR A+ NIIP+STGAAKAV KV+PDL GKLTGM+FRVP +VSV
Sbjct: 185 ATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSV 244
Query: 241 VDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIA 300
VDLTVR+ +YD IK+ +K+AS+G +KGI+GY E+++VS+DF G+ SS+FDAKAGIA
Sbjct: 245 VDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIA 304
Query: 301 LNKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
LN NFVKLV WYDNE+GYS RV+DLI++M
Sbjct: 305 LNDNFVKLVAWYDNEWGYSNRVIDLIRHM 333
>pdb|1GAD|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAD|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1DC3|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC3|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC5|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC5|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC6|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes.
pdb|1DC6|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
Length = 330
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/328 (67%), Positives = 262/328 (79%), Gaps = 4/328 (1%)
Query: 4 KIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
K+GINGFGRIGR+V R A R + +V IND L DY+AYMLKYDSTHGRF G V+ +
Sbjct: 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFDGTVEVKD 61
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+++VNGKKI V + P + W + G + + E+TG+F T +TA H+ GAKKV++T P
Sbjct: 62 GHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGP 121
Query: 123 SKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTA 181
SKD PMFV G N DKY +VSNASCTTNCLAPLAKVI+DNF I+EGLMTTVHA TA
Sbjct: 122 SKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTA 180
Query: 182 TQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVV 241
TQKTVD PS K WR GRGA+QNIIP+STGAAKAV KV+P+L GKLTGMAFRVP PNVSVV
Sbjct: 181 TQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVV 240
Query: 242 DLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIAL 301
DLTVRL TY++IKA VKAA++G MKG+LGYTED+VVS+DFNGEVC+SVFDAKAGIAL
Sbjct: 241 DLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIAL 300
Query: 302 NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
N NFVKLV+WYDNE GYS +VLDLI ++
Sbjct: 301 NDNFVKLVSWYDNETGYSNKVLDLIAHI 328
>pdb|1GAE|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAE|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
Length = 330
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/328 (67%), Positives = 261/328 (79%), Gaps = 4/328 (1%)
Query: 4 KIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
K+GINGFGRIGR+V R A R + +V IND L DY+AYMLKYDSTHGRF G V+ +
Sbjct: 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFDGTVEVKD 61
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+++VNGKKI V + P + W + G + + E+TG+F T +TA H+ GAKKV++T P
Sbjct: 62 GHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGP 121
Query: 123 SKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTA 181
SKD PMFV G N DKY +VSNASCTTNCLAPLAKVI+DNF I+EGLMTTVHA TA
Sbjct: 122 SKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTA 180
Query: 182 TQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVV 241
TQKTVD PS K WR GRGA+QNIIP+STGAAKAV KV+P+L GKLTGMAFRVP PNVSVV
Sbjct: 181 TQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVV 240
Query: 242 DLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIAL 301
DLTVRL TY++IKA VKAA++G MKG+LGYTED+VVS+DFNGEVC+SVFDAKAGIAL
Sbjct: 241 DLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIAL 300
Query: 302 NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
N NFVKLV+WYD E GYS +VLDLI ++
Sbjct: 301 NDNFVKLVSWYDTETGYSNKVLDLIAHI 328
>pdb|2I5P|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
pdb|2I5P|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
Length = 342
Score = 446 bits (1148), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/326 (66%), Positives = 261/326 (80%), Gaps = 2/326 (0%)
Query: 5 IGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
I INGFGRIGRLVLR AL R N VV INDP +SVDY AYM KYDSTHG++KG+V +G+
Sbjct: 17 IAINGFGRIGRLVLRIALERKNIDVVAINDPFISVDYAAYMFKYDSTHGKYKGEVSHDGS 76
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
N+++NGKK+AVFQ+ P +PW + G + V+STGVFK D+A H+ GAKKV+ITAPS
Sbjct: 77 NLIINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAPS 136
Query: 124 KDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQ 183
K APMFV GVN DKY+ +VSNASCTTNCLAP+AK+I+D F I EGLMTTVH++TATQ
Sbjct: 137 KTAPMFVVGVNEDKYN-GEKIVSNASCTTNCLAPIAKIINDEFGIEEGLMTTVHSITATQ 195
Query: 184 KTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDL 243
KTVD PS K WR GR A+ NIIP+STGAAKAV KV+P+L+GKLTGMAFRVP +VSVVDL
Sbjct: 196 KTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTTDVSVVDL 255
Query: 244 TVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNK 303
TV+L TYDEIKA VK S+G +K ++GYTED VVSSDF G+ S++FDA AGI L+
Sbjct: 256 TVKLVKAATYDEIKAAVKKVSEGKLKDVVGYTEDAVVSSDFLGDTHSTIFDAAAGIQLSP 315
Query: 304 NFVKLVTWYDNEYGYSCRVLDLIQYM 329
FVKLV WYDNEYGYS RV+DL++++
Sbjct: 316 KFVKLVAWYDNEYGYSTRVVDLVEHV 341
>pdb|2VYN|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 331
Score = 446 bits (1147), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/331 (66%), Positives = 261/331 (78%), Gaps = 4/331 (1%)
Query: 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
M K+GINGFGRIGR+V R A R + +V IND L DY+AYMLKYDSTHGRF G V+
Sbjct: 1 MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFDGTVE 59
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
+ +++VNGKKI V + P + W + G + + E+TG+F T +TA H+ GAKKV++
Sbjct: 60 VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVM 119
Query: 120 TAPSKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
T PSKD PMFV G N DKY +VSNAS TTNCLAPLAKVI+DNF I+EGLMTTVHA
Sbjct: 120 TGPSKDNTPMFVKGANFDKY-AGQDIVSNASXTTNCLAPLAKVINDNFGIIEGLMTTVHA 178
Query: 179 VTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238
TATQKTVD PS K WR GRGA+QNIIP+STGAAKAV KV+P+L GKLTGMAFRVP PNV
Sbjct: 179 TTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 238
Query: 239 SVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAG 298
SVVDLTVRL TY++IKA VKAA++G MKG+LGYTED+VVS+DFNGEV +SVFDAKAG
Sbjct: 239 SVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVXTSVFDAKAG 298
Query: 299 IALNKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
IALN NFVKLV+WYDNE GYS +VLDLI ++
Sbjct: 299 IALNDNFVKLVSWYDNETGYSNKVLDLIAHI 329
>pdb|3PYM|A Chain A, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
pdb|3PYM|B Chain B, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
Length = 332
Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/327 (64%), Positives = 258/327 (78%), Gaps = 1/327 (0%)
Query: 4 KIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
++ INGFGRIGRLV+R AL R N VV +NDP ++ DY AYM KYDSTHGR+ G+V +
Sbjct: 3 RVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDD 62
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+I+V+GKKIA +Q+ P +PW + + ++STGVFK DTA H+ GAKKV+ITAP
Sbjct: 63 KHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAP 122
Query: 123 SKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTAT 182
S APMFV GVN +KY +VSNASCTTNCLAPLAKVI+D F I EGLMTTVH++TAT
Sbjct: 123 SSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSLTAT 182
Query: 183 QKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVD 242
QKTVD PS K WR GR A+ NIIP+STGAAKAV KV+P+L+GKLTGMAFRVP +VSVVD
Sbjct: 183 QKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVD 242
Query: 243 LTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALN 302
LTV+L + TYDEIK VKAA++G +KG+LGYTED VVSSDF G+ SS+FDA AGI L+
Sbjct: 243 LTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLS 302
Query: 303 KNFVKLVTWYDNEYGYSCRVLDLIQYM 329
FVKLV+WYDNEYGYS RV+DL++++
Sbjct: 303 PKFVKLVSWYDNEYGYSTRVVDLVEHV 329
>pdb|4IQ8|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase 3 From Saccharomyces Cerevisiae
Length = 340
Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/327 (64%), Positives = 258/327 (78%), Gaps = 1/327 (0%)
Query: 4 KIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
++ INGFGRIGRLV+R AL R N VV +NDP ++ DY AYM KYDSTHGR+ G+V +
Sbjct: 11 RVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDD 70
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+I+V+GKKIA +Q+ P +PW + + ++STGVFK DTA H+ GAKKV+ITAP
Sbjct: 71 KHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAP 130
Query: 123 SKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTAT 182
S APMFV GVN +KY +VSNASCTTNCLAPLAKVI+D F I EGLMTTVH++TAT
Sbjct: 131 SSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSLTAT 190
Query: 183 QKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVD 242
QKTVD PS K WR GR A+ NIIP+STGAAKAV KV+P+L+GKLTGMAFRVP +VSVVD
Sbjct: 191 QKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVD 250
Query: 243 LTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALN 302
LTV+L + TYDEIK VKAA++G +KG+LGYTED VVSSDF G+ SS+FDA AGI L+
Sbjct: 251 LTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLS 310
Query: 303 KNFVKLVTWYDNEYGYSCRVLDLIQYM 329
FVKLV+WYDNEYGYS RV+DL++++
Sbjct: 311 PKFVKLVSWYDNEYGYSTRVVDLVEHV 337
>pdb|1VSU|A Chain A, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|B Chain B, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|C Chain C, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|D Chain D, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|A Chain A, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|B Chain B, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|C Chain C, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|D Chain D, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/337 (63%), Positives = 254/337 (75%), Gaps = 5/337 (1%)
Query: 1 MAYKIGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
M +GINGFGRIGRLVLR + RN VV INDP + V+Y+AY+LKYDS HG F G V+
Sbjct: 21 MTATLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVE 80
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
G ++ +NGK + VFQ P EIPW +GA+ + ESTGVF T++ AS HLKGGAKKVII
Sbjct: 81 VSGKDLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVII 140
Query: 120 TAPSKD-APMFVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVH 177
+AP KD PM+V GVN +YDPS +V+SNASCTTNCLAPLAK+I+D F I+EGLMTTVH
Sbjct: 141 SAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVH 200
Query: 178 AVTATQKTVDAPSK--KMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPV 235
++TA Q TVD PSK K WR GR A NIIPASTGAAKAV KVIP L GKLTGMA RVP
Sbjct: 201 SLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPT 260
Query: 236 PNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDA 295
P+VSVVDLT +L + +EI VK AS GPMKGI+GYT D+VVS+DF G SS+FD
Sbjct: 261 PDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDK 320
Query: 296 KAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
A IALN +FVKL++WYDNE GYS R++DL Y+ S+
Sbjct: 321 NACIALNDSFVKLISWYDNESGYSNRLVDLAVYVASR 357
>pdb|3CPS|A Chain A, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|3CPS|B Chain B, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 354
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/333 (63%), Positives = 253/333 (75%), Gaps = 5/333 (1%)
Query: 5 IGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
+GINGFGRIGRLVLR + RN VV INDP + V+Y+AY+LKYDS HG F G V+ G
Sbjct: 20 LGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGK 79
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
++ +NGK + VFQ P EIPW +GA+ + ESTGVF T++ AS HLKGGAKKVII+AP
Sbjct: 80 DLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPP 139
Query: 124 KD-APMFVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTA 181
KD PM+V GVN +YDPS +V+SNASCTTNCLAPLAK+I+D F I+EGLMTTVH++TA
Sbjct: 140 KDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLTA 199
Query: 182 TQKTVDAPSK--KMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVS 239
Q TVD PSK K WR GR A NIIPASTGAAKAV KVIP L GKLTGMA RVP P+VS
Sbjct: 200 NQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVS 259
Query: 240 VVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGI 299
VVDLT +L + +EI VK AS GPMKGI+GYT D+VVS+DF G SS+FD A I
Sbjct: 260 VVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACI 319
Query: 300 ALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
ALN +FVKL++WYDNE GYS R++DL Y+ S+
Sbjct: 320 ALNDSFVKLISWYDNESGYSNRLVDLAVYVASR 352
>pdb|1DC4|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC4|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
Length = 330
Score = 417 bits (1071), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/328 (66%), Positives = 255/328 (77%), Gaps = 4/328 (1%)
Query: 4 KIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
K+GINGFGRIGR+V R A R + +V IND L DY AY LKYDSTHGRF G V+ +
Sbjct: 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYXAYXLKYDSTHGRFDGTVEVKD 61
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+++VNGKKI V + P + W + G + + E+TG+F T +TA H+ GAKKV+ T P
Sbjct: 62 GHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVXTGP 121
Query: 123 SKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTA 181
SKD P FV G N DKY +VSNASCTTNCLAPLAKVI+DNF I+EGL TTVHA TA
Sbjct: 122 SKDNTPXFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLXTTVHATTA 180
Query: 182 TQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVV 241
TQKTVD PS K WR GRGA+QNIIP+STGAAKAV KV+P+L GKLTG AFRVP PNVSVV
Sbjct: 181 TQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGXAFRVPTPNVSVV 240
Query: 242 DLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIAL 301
DLTVRL TY++IKA VKAA++G KG+LGYTED+VVS+DFNGEVC+SVFDAKAGIAL
Sbjct: 241 DLTVRLEKAATYEQIKAAVKAAAEGEXKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIAL 300
Query: 302 NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
N NFVKLV+WYDNE GYS +VLDLI ++
Sbjct: 301 NDNFVKLVSWYDNETGYSNKVLDLIAHI 328
>pdb|3CIF|A Chain A, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|B Chain B, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|C Chain C, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|D Chain D, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/337 (62%), Positives = 252/337 (74%), Gaps = 5/337 (1%)
Query: 1 MAYKIGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
M +GINGFGRIGRLVLR + RN VV INDP + V+Y+AY+LKYDS HG F G V+
Sbjct: 21 MTATLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVE 80
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
G ++ +NGK + VFQ P EIPW +GA+ + ESTGVF T++ AS HLKGGAKKVII
Sbjct: 81 VSGKDLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVII 140
Query: 120 TAPSKD-APMFVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVH 177
+AP KD PM+V GVN +YDPS +V+SNAS TTNCLAPLAK+I+D F I+EGLMTTVH
Sbjct: 141 SAPPKDNVPMYVMGVNNTEYDPSKFNVISNASSTTNCLAPLAKIINDKFGIVEGLMTTVH 200
Query: 178 AVTATQKTVDAPSK--KMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPV 235
++TA Q TVD PSK K WR GR A NIIPASTGAAKAV KVIP L GKLTGMA RVP
Sbjct: 201 SLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPT 260
Query: 236 PNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDA 295
P+VSVVDLT +L + +EI VK AS GPMKGI+GYT D+VVS+DF G SS+ D
Sbjct: 261 PDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSILDK 320
Query: 296 KAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
A IALN +FVKL++WYDNE GYS R++DL Y+ S+
Sbjct: 321 NACIALNDSFVKLISWYDNESGYSNRLVDLAVYVASR 357
>pdb|3STH|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
Length = 361
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/338 (62%), Positives = 252/338 (74%), Gaps = 5/338 (1%)
Query: 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
M K+GINGFGRIGRLV R A+ R + V+ INDP +S+DY+ Y+L+YDS HG + G+V
Sbjct: 22 MVCKLGINGFGRIGRLVFRAAMERGDVEVLAINDPFMSLDYMVYLLRYDSVHGHYPGEVS 81
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
+ ++V GK + VF + +P IPW Q G YI ESTG+F TK+ A AHL GAKKVI+
Sbjct: 82 HKDGKLIVGGKAVTVFNEKEPTAIPWGQAGVHYICESTGIFLTKEKAQAHLTNGAKKVIM 141
Query: 120 TAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
+AP K D PMFV GVN D+Y S +VSNASCTTNCLAPLAK++HD F I+EGLMTTVHA
Sbjct: 142 SAPPKDDTPMFVMGVNNDQYKSSDVIVSNASCTTNCLAPLAKIVHDKFGIVEGLMTTVHA 201
Query: 179 VTATQKTVDAPSK--KMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVP 236
+TA Q TVD PSK K WR GR A NIIPASTGAAKAV K+IP L GKLTGMAFRVPVP
Sbjct: 202 MTANQLTVDGPSKGGKDWRAGRSAGVNIIPASTGAAKAVGKIIPSLNGKLTGMAFRVPVP 261
Query: 237 NVSVVDLTVRLCCDVTYDEIKAKVK-AASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDA 295
+VSVVDLT +L Y++I A VK AA+ GPMKGI+ YT++EVVSSDF SSVFD
Sbjct: 262 DVSVVDLTCKLAKPAKYEDIVAAVKEAATSGPMKGIISYTDEEVVSSDFVHCKFSSVFDI 321
Query: 296 KAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSKD 333
AGI LN FVKLV+WYDNE+GYS R+++L YM +D
Sbjct: 322 NAGIMLNDTFVKLVSWYDNEWGYSNRLVELAHYMSVQD 359
>pdb|1YWG|O Chain O, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|P Chain P, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|Q Chain Q, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|R Chain R, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
Length = 337
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/330 (60%), Positives = 247/330 (74%), Gaps = 4/330 (1%)
Query: 4 KIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
K+GINGFGRIGRLV R A R + VV INDP + +++L Y+LKYDS HG+F +V
Sbjct: 5 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHAD 64
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+++ KK++VF + P +IPW + + + ESTGVF TK+ AS+HLKGGAKKVI++AP
Sbjct: 65 GFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAP 124
Query: 123 SKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTA 181
KD P++V G+N +YD +VSNASCTTNCLAPLAKVI+D F I+EGLMTTVHA TA
Sbjct: 125 PKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTA 184
Query: 182 TQKTVDAPSK--KMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVS 239
Q VD PSK K WR GR A NIIPASTGAAKAV KV+P+L GKLTG+AFRVP+ VS
Sbjct: 185 NQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVS 244
Query: 240 VVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGI 299
VVDL RL Y+E+ ++K A++GP+KGILGYTEDEVVS DF + SS+FD KAG+
Sbjct: 245 VVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGL 304
Query: 300 ALNKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
ALN NF KLV+WYDNE+GYS RVLDL ++
Sbjct: 305 ALNDNFFKLVSWYDNEWGYSNRVLDLAVHI 334
>pdb|2B4R|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
Length = 345
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/332 (59%), Positives = 248/332 (74%), Gaps = 4/332 (1%)
Query: 4 KIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
K+GINGFGRIGRLV R A R + VV INDP + +++L Y+LKYDS HG+F +V
Sbjct: 13 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHAD 72
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
+++ KK++VF + P +IPW + + + ESTGVF TK+ AS+HLKGGAKKVI++AP
Sbjct: 73 GFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAP 132
Query: 123 SKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTA 181
KD P++V G+N +YD +VSNASCTTNCLAPLAKVI+D F I+EGLMTTVHA TA
Sbjct: 133 PKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTA 192
Query: 182 TQKTVDAPSK--KMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVS 239
Q VD PSK K WR GR A NIIPASTGAAKAV KV+P+L GKLTG+AFRVP+ VS
Sbjct: 193 NQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVS 252
Query: 240 VVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGI 299
VVDL RL Y+E+ ++K A++GP+KGILGYTEDEVVS DF + SS+FD KAG+
Sbjct: 253 VVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGL 312
Query: 300 ALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKS 331
ALN NF KLV+WYDNE+GYS RVLDL ++ +
Sbjct: 313 ALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 344
>pdb|1GD1|O Chain O, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|P Chain P, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|Q Chain Q, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|2GD1|O Chain O, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|P Chain P, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|Q Chain Q, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|R Chain R, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|3CMC|O Chain O, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|P Chain P, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|Q Chain Q, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|R Chain R, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
Length = 334
Score = 358 bits (920), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/334 (53%), Positives = 237/334 (70%), Gaps = 5/334 (1%)
Query: 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKT 60
A K+GINGFGRIGR V R AL + VV +ND + LA++LKYDS HGR +V
Sbjct: 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLDAEVSV 59
Query: 61 EGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120
GNN+VVNGK+I V + PE + W + G + +VESTG F ++ A+ HL+ GAKKVII+
Sbjct: 60 NGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIIS 119
Query: 121 APSKDAPM-FVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
AP+K+ + V GVN DKYDP +H V+SNASCTTNCLAP AKV+H+ F I+ G+MTTVH+
Sbjct: 120 APAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHS 179
Query: 179 VTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238
T Q+ +D P K + R R A ++IIP +TGAAKAVA V+P+L+GKL GMA RVP PNV
Sbjct: 180 YTNDQRILDLPHKDLRR-ARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 239 SVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAG 298
SVVDL L +VT +E+ A +KAA++G +KGIL Y+E+ +VS D+NG SS DA +
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 299 IALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ ++ VK+V+WYDNE GYS RV+DL Y+ SK
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASK 332
>pdb|3DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|4DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 357 bits (917), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 180/334 (53%), Positives = 237/334 (70%), Gaps = 5/334 (1%)
Query: 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKT 60
A K+GINGFGRIGR V R AL + VV +ND + LA++LKYDS HGR +V
Sbjct: 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDTG-GANTLAHLLKYDSVHGRLDAEVSV 59
Query: 61 EGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120
GNN+VVNGK+I V + PE + W + G + +VESTG F ++ A+ HL+ GAKKVII+
Sbjct: 60 NGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIIS 119
Query: 121 APSKDAPM-FVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
AP+K+ + V GVN DKYDP +H V+SNASCTTNCLAP AKV+H+ F I+ G+MTTVH+
Sbjct: 120 APAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHS 179
Query: 179 VTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238
T Q+ +DA K + R R A ++IIP +TGAAKAVA V+P+L+GKL GMA RVP PNV
Sbjct: 180 YTNDQRILDASHKDL-RRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 239 SVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAG 298
SVVDL L +VT +E+ A +KAA++G +KGIL Y+E+ +VS D+NG SS DA +
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 299 IALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ ++ VK+V+WYDNE GYS RV+DL Y+ SK
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASK 332
>pdb|1NPT|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NQA|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
Length = 334
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/334 (53%), Positives = 236/334 (70%), Gaps = 5/334 (1%)
Query: 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKT 60
A K+GINGFGRIGR V R AL + VV +ND + LA++LKYDS HGR +V
Sbjct: 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLDAEVSV 59
Query: 61 EGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120
GNN+VVNGK+I V + PE + W + G + +VESTG F ++ A+ HL+ GAKKVII+
Sbjct: 60 NGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIIS 119
Query: 121 APSKDAPM-FVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
AP+K+ + V GVN DKYDP +H V+SNAS TTNCLAP AKV+H+ F I+ G+MTTVH+
Sbjct: 120 APAKNEDITIVMGVNQDKYDPKAHHVISNASATTNCLAPFAKVLHEQFGIVRGMMTTVHS 179
Query: 179 VTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238
T Q+ +D P K + R R A ++IIP +TGAAKAVA V+P+L+GKL GMA RVP PNV
Sbjct: 180 YTNDQRILDLPHKDLRR-ARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 239 SVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAG 298
SVVDL L +VT +E+ A +KAA++G +KGIL Y+E+ +VS D+NG SS DA +
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 299 IALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ ++ VK+V+WYDNE GYS RV+DL Y+ SK
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASK 332
>pdb|1NQ5|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQO|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
Length = 334
Score = 355 bits (912), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/334 (53%), Positives = 236/334 (70%), Gaps = 5/334 (1%)
Query: 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKT 60
A K+GINGFGRIGR V R AL + VV +ND + LA++LKYDS HGR +V
Sbjct: 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLDAEVSV 59
Query: 61 EGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120
GNN+VVNGK+I V + PE + W + G + +VESTG F ++ A+ HL+ GAKKVII+
Sbjct: 60 NGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIIS 119
Query: 121 APSKDAPM-FVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
AP+K+ + V GVN DKYDP +H V+SNAS TTNCLAP AKV+H+ F I+ G+MTTVH+
Sbjct: 120 APAKNEDITIVMGVNQDKYDPKAHHVISNASSTTNCLAPFAKVLHEQFGIVRGMMTTVHS 179
Query: 179 VTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238
T Q+ +D P K + R R A ++IIP +TGAAKAVA V+P+L+GKL GMA RVP PNV
Sbjct: 180 YTNDQRILDLPHKDLRR-ARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 239 SVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAG 298
SVVDL L +VT +E+ A +KAA++G +KGIL Y+E+ +VS D+NG SS DA +
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 299 IALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ ++ VK+V+WYDNE GYS RV+DL Y+ SK
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASK 332
>pdb|1DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|2DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 355 bits (910), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 179/334 (53%), Positives = 236/334 (70%), Gaps = 5/334 (1%)
Query: 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKT 60
A K+GINGFGRIGR V R AL + VV +N + LA++LKYDS HGR +V
Sbjct: 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNGL-TDANTLAHLLKYDSVHGRLDAEVSV 59
Query: 61 EGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120
GNN+VVNGK+I V + PE + W + G + +VESTG F ++ A+ HL+ GAKKVII+
Sbjct: 60 NGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIIS 119
Query: 121 APSKDAPM-FVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
AP+K+ + V GVN DKYDP +H V+SNASCTTNCLAP AKV+H+ F I+ G+MTTVH+
Sbjct: 120 APAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHS 179
Query: 179 VTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238
T Q+ +DA K + R R A ++IIP +TGAAKAVA V+P+L+GKL GMA RVP PNV
Sbjct: 180 YTNDQRILDASHKDL-RRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238
Query: 239 SVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAG 298
SVVDL L +VT +E+ A +KAA++G +KGIL Y+E+ +VS D+NG SS DA +
Sbjct: 239 SVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALST 298
Query: 299 IALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ ++ VK+V+WYDNE GYS RV+DL Y+ SK
Sbjct: 299 MVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASK 332
>pdb|1K3T|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1ML3|A Chain A, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|B Chain B, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|C Chain C, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|D Chain D, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1QXS|C Chain C, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|D Chain D, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|A Chain A, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|B Chain B, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|3DMT|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3IDS|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
Length = 359
Score = 345 bits (884), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/358 (50%), Positives = 242/358 (67%), Gaps = 21/358 (5%)
Query: 1 MAYKIGINGFGRIGRLVLREA-----LHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFK 55
M K+GINGFGRIGR+V + L VV + D + +Y AY ++YD+ HG+FK
Sbjct: 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK 60
Query: 56 GDVKT--------EGNNIVVNGKKIAVFQKMK-PEEIPWSQTGAEYIVESTGVFKTKDTA 106
+V T + + +VVNG +I + + P ++PW + G EY++ESTG+F K A
Sbjct: 61 YEVTTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAA 120
Query: 107 SAHLKGGAKKVIITAP-SKDAPMFVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKV-IH 163
HL+GGA+KV+I+AP S A V GVN +Y+PS H VVSNASCTTNCLAP+ V +
Sbjct: 121 EGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASCTTNCLAPIVHVLVK 180
Query: 164 DNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLE 223
+ F + GLMTT+H+ TATQKTVD S K WR GR A NIIP++TGAAKAV VIP +
Sbjct: 181 EGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQ 240
Query: 224 GKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSD 283
GKLTGM+FRVP P+VSVVDLT D + EI A +K AS+ MKGILGYT++E+VS+D
Sbjct: 241 GKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSAD 300
Query: 284 FNGEVCSSVFDAKAGIALN----KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKDTGSK 337
F + SS++D+KA + N + F K+V+WYDNE+GYS RV+DL+++M SKD ++
Sbjct: 301 FINDNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMASKDRSAR 358
>pdb|2X0N|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|O Chain O, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|P Chain P, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|Q Chain Q, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|R Chain R, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
Length = 359
Score = 341 bits (874), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 182/358 (50%), Positives = 237/358 (66%), Gaps = 21/358 (5%)
Query: 1 MAYKIGINGFGRIGRLVLREA-----LHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFK 55
M K+GINGFGRIGR+V + L VV + D + Y AY +KYDS HG+FK
Sbjct: 1 MTIKVGINGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFK 60
Query: 56 GDVKT--------EGNNIVVNGKKIAVFQKMK-PEEIPWSQTGAEYIVESTGVFKTKDTA 106
V T + + +VVNG +I + + P ++PW + G EY++ESTG+F K A
Sbjct: 61 HSVSTTKSKPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAA 120
Query: 107 SAHLKGGAKKVIITAP-SKDAPMFVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKV-IH 163
HL+GGA+KV+I+AP S A FV GVN + Y+P VVSNASCTTNCLAPL V +
Sbjct: 121 EGHLRGGARKVVISAPASGGAKTFVMGVNHNNYNPREQHVVSNASCTTNCLAPLVHVLVK 180
Query: 164 DNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLE 223
+ F I GLMTTVH+ TATQKTVD S K WR GR A NIIP++TGAAKAV VIP +
Sbjct: 181 EGFGISTGLMTTVHSYTATQKTVDGVSVKDWRGGRAAALNIIPSTTGAAKAVGMVIPSTQ 240
Query: 224 GKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSD 283
GKLTGMAFRVP +VSVVDLT D + EI A +K AS+ MK ILGYT++E+VS+D
Sbjct: 241 GKLTGMAFRVPTADVSVVDLTFIATRDTSIKEIDAALKRASKTYMKNILGYTDEELVSAD 300
Query: 284 FNGEVCSSVFDAKAGIALN----KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKDTGSK 337
F + SS++D+KA + N + F K+V+WYDNE+GYS RV+DL+++M ++D +K
Sbjct: 301 FISDSRSSIYDSKATLQNNLPNERRFFKIVSWYDNEWGYSHRVVDLVRHMAARDRAAK 358
>pdb|3DMT|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
Length = 359
Score = 341 bits (874), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 179/358 (50%), Positives = 241/358 (67%), Gaps = 21/358 (5%)
Query: 1 MAYKIGINGFGRIGRLVLREA-----LHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFK 55
M K+GINGFGRIGR+V + L VV + D + +Y AY ++YD+ HG+FK
Sbjct: 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK 60
Query: 56 GDVKT--------EGNNIVVNGKKIAVFQKMK-PEEIPWSQTGAEYIVESTGVFKTKDTA 106
+V T + + +VVNG +I + + P ++PW + G EY++ESTG+F K A
Sbjct: 61 YEVTTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAA 120
Query: 107 SAHLKGGAKKVIITAP-SKDAPMFVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKV-IH 163
HL+GGA+KV+I+AP S A V GVN +Y+PS H VVSNAS TTNCLAP+ V +
Sbjct: 121 EGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASXTTNCLAPIVHVLVK 180
Query: 164 DNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLE 223
+ F + GLMTT+H+ TATQKTVD S K WR GR A NIIP++TGAAKAV VIP +
Sbjct: 181 EGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQ 240
Query: 224 GKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSD 283
GKLTGM+FRVP P+VSVVDLT D + EI A +K AS+ MKGILGYT++E+VS+D
Sbjct: 241 GKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSAD 300
Query: 284 FNGEVCSSVFDAKAGIALN----KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKDTGSK 337
F + SS++D+KA + N + F K+V+WYDNE+GYS RV+DL+++M SKD ++
Sbjct: 301 FINDNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMASKDRSAR 358
>pdb|1GYP|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYQ|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
Length = 358
Score = 334 bits (857), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/354 (50%), Positives = 236/354 (66%), Gaps = 21/354 (5%)
Query: 4 KIGINGFGRIGRLVLRE-----ALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDV 58
K+GINGFGRIGR+V + + VV + D + +Y AY +K+D+ HGR K V
Sbjct: 4 KVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTV 63
Query: 59 KT--------EGNNIVVNGKKIAVFQKMK-PEEIPWSQTGAEYIVESTGVFKTKDTASAH 109
+ + +VVNG +I + + P ++PW + G +Y++ESTG+F K A H
Sbjct: 64 EAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGH 123
Query: 110 LKGGAKKVIITAP-SKDAPMFVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVI-HDNF 166
+KGGAKKV+I+AP S A V GVN +Y P SH VVSNASCTTNCLAP+ V+ +NF
Sbjct: 124 IKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENF 183
Query: 167 EILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKL 226
I GLMTT+H+ TATQKTVD S K WR GR A NIIP++TGAAKAV VIP +GKL
Sbjct: 184 GIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKL 243
Query: 227 TGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNG 286
TGM+FRVP P+VSVVDLT R D + EI +K A+Q MKGILG+T++E+VS+DF
Sbjct: 244 TGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFIN 303
Query: 287 EVCSSVFDAKAGIALN----KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKDTGS 336
+ SSV+D+KA + N K F K+V+WYDNE+ YS RV+DL++YM +KD S
Sbjct: 304 DNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAAS 357
>pdb|1A7K|A Chain A, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|B Chain B, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|C Chain C, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|D Chain D, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1I32|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
Length = 360
Score = 334 bits (856), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 180/354 (50%), Positives = 236/354 (66%), Gaps = 21/354 (5%)
Query: 4 KIGINGFGRIGRLVLREALHR-----NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDV 58
K+GINGFGRIGR+V + + VV + D + +Y AY +K+D+ HGR K V
Sbjct: 4 KVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTV 63
Query: 59 KT--------EGNNIVVNGKKIAVFQKMK-PEEIPWSQTGAEYIVESTGVFKTKDTASAH 109
+ + +VVNG +I + + P ++PW + G +Y++ESTG+F K A H
Sbjct: 64 EAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGH 123
Query: 110 LKGGAKKVIITAP-SKDAPMFVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVI-HDNF 166
+KGGAKKV+I+AP S A V GVN +Y P SH VVSNASCTTNCLAP+ V+ +NF
Sbjct: 124 IKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENF 183
Query: 167 EILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKL 226
I GLMTT+H+ TATQKTVD S K WR GR A NIIP++TGAAKAV VIP +GKL
Sbjct: 184 GIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKL 243
Query: 227 TGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNG 286
TGM+FRVP P+VSVVDLT R D + EI +K A+Q MKGILG+T++E+VS+DF
Sbjct: 244 TGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADFIN 303
Query: 287 EVCSSVFDAKAGIALN----KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKDTGS 336
+ SSV+D+KA + N K F K+V+WYDNE+ YS RV+DL++YM +KD S
Sbjct: 304 DNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYMAAKDAAS 357
>pdb|1HDG|O Chain O, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
pdb|1HDG|Q Chain Q, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
Length = 332
Score = 317 bits (813), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/330 (47%), Positives = 223/330 (67%), Gaps = 6/330 (1%)
Query: 4 KIGINGFGRIGRLVLREALHRNTP---VVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKT 60
++ INGFGRIGRLV R R P VV IND LA++LKYDS H +F G V+
Sbjct: 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAIND-LTDTKTLAHLLKYDSVHKKFPGKVEY 60
Query: 61 EGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120
N+++V+GK+I VF + P ++PW G ++++ESTGVF+ ++ A HL+ GAKKVIIT
Sbjct: 61 TENSLIVDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIIT 120
Query: 121 APSKDAPM-FVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAV 179
AP+K + V G N D+ P H+++S ASCTTN +AP+ KV+H+ F I+ G++TTVH+
Sbjct: 121 APAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAPIVKVLHEKFGIVSGMLTTVHSY 180
Query: 180 TATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVS 239
T Q+ +D P K + R R A NIIP +TGAAKAVA V+P+++GKL GMA RVP P+ S
Sbjct: 181 TNDQRVLDLPHKDL-RRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDGS 239
Query: 240 VVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGI 299
+ DLTV + + T +E+ A +K A++G +KGI+GY ++ +VSSD G S +FDA
Sbjct: 240 ITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITN 299
Query: 300 ALNKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
+ VK+ +WYDNEYGYS RV+D ++ +
Sbjct: 300 VIGGKLVKVASWYDNEYGYSNRVVDTLELL 329
>pdb|2EP7|A Chain A, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
pdb|2EP7|B Chain B, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
Length = 342
Score = 309 bits (791), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/343 (47%), Positives = 230/343 (67%), Gaps = 14/343 (4%)
Query: 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
MA K+GINGFGRIGR R + R +V IND +LA++LKYDS HG FKG V+
Sbjct: 1 MAIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFKGSVE 59
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
+ ++IVV+GK+I VF + P +IPW G + ++E+TGVF+ ++ AS HL+GGAKKVII
Sbjct: 60 AKDDSIVVDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVII 119
Query: 120 TAPSKDAPM-FVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVH 177
TAP+K+ + V GVN +KY+P H+++SNASCTTNCLAP KV+++ F + +G M TVH
Sbjct: 120 TAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVH 179
Query: 178 AVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
A T Q+ +D P K +R R A NI+P +TGAAKA+ +VIP+L+GKL G A RVPVP+
Sbjct: 180 AYTNDQRLLDLPHKD-FRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPD 238
Query: 238 VSVVDLTVRLC-CDVTYDEIKAKVKAASQG-------PMKGILGYTEDEVVSSDFNGEVC 289
S++DLTV + + +E+ K + A+Q +K IL Y ED +VS+D G
Sbjct: 239 GSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPH 298
Query: 290 SSVFDAKAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
S++FDA ++ N V + WYDNE+GYSCR+ DL+ Y+ +
Sbjct: 299 SAIFDAPLTQVID-NLVHIAAWYDNEWGYSCRLRDLVIYLAER 340
>pdb|3HJA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
Length = 356
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/336 (48%), Positives = 219/336 (65%), Gaps = 10/336 (2%)
Query: 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTE 61
+ K+ INGFGRIGR V + A R +V IND LA++LKYDST G + V++
Sbjct: 21 SMKLAINGFGRIGRNVFKIAFERGIDIVAINDL-TDPKTLAHLLKYDSTFGVYNKKVESR 79
Query: 62 GNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASA----HLK-GGAKK 116
IVV+G++I + + P+ +PW++ G + ++ESTGVF + + H+ GAKK
Sbjct: 80 DGAIVVDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKK 139
Query: 117 VIITAPSKDA-PMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTT 175
VI+T P+KD V GVN + VSNASCTTNCLAPLAKV+H++F I +GLMTT
Sbjct: 140 VILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTT 199
Query: 176 VHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPV 235
VHA T Q+ +D P + R R A +IIP STGAAKAV V+P+L+GKL G + RVPV
Sbjct: 200 VHAYTNDQRILDLPHSDLRR-ARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPV 258
Query: 236 PNVSVVDLTVRL-CCDVTYDEIKAKVKAASQGP-MKGILGYTEDEVVSSDFNGEVCSSVF 293
P S+VDLTV+L DVT +EI + ++ AS+ P +KGILGYTED +VSSD G SS+
Sbjct: 259 PTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIV 318
Query: 294 DAKAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
D + L F K+++WYDNE+GYS RV+DL Q +
Sbjct: 319 DGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKL 354
>pdb|1VC2|A Chain A, Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Thermus Thermophilus Hb8
Length = 331
Score = 295 bits (754), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/331 (50%), Positives = 216/331 (65%), Gaps = 5/331 (1%)
Query: 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
K+GINGFGRIGR V R R V IND LA++LKYDST+GRF G V +
Sbjct: 2 KVGINGFGRIGRQVFRILHERGVEVALINDL-TDNKTLAHLLKYDSTYGRFPGAVGYDEE 60
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
N+ V+GK I P EIPW Q G +VESTGVF + A AHL+ GAKKVIITAP+
Sbjct: 61 NLYVDGKAIRATAIKDPREIPWKQAGVGVVVESTGVFTDGEKARAHLEAGAKKVIITAPA 120
Query: 124 KDAPM-FVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTA 181
K+ + V GVN ++YDP+ H ++SNASCTTN LAP+ KV+ F + + LMTTVH+ T
Sbjct: 121 KNEDITVVLGVNHEQYDPAKHHILSNASCTTNSLAPVMKVLEKAFGVEKALMTTVHSYTN 180
Query: 182 TQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVV 241
Q+ +D P K + R R A NIIP +TGAAKA A V+P L+G+ GMA RVP P S+
Sbjct: 181 DQRLLDLPHKDL-RRARAAALNIIPTTTGAAKATALVLPSLKGRFDGMALRVPTPTGSIS 239
Query: 242 DLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIAL 301
D+T L +VT +E+ A +KAA++GP+KGIL YTEDE+V D + SS+ D K A+
Sbjct: 240 DITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLRDIVMDPHSSIVDGKLTKAI 299
Query: 302 NKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
N VK+ WYDNE+GY+ RV DL++ + K
Sbjct: 300 G-NLVKVFAWYDNEWGYANRVADLVELVLKK 329
>pdb|3DOC|A Chain A, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|B Chain B, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|C Chain C, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|D Chain D, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
Length = 335
Score = 293 bits (749), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 216/328 (65%), Gaps = 6/328 (1%)
Query: 1 MAYKIGINGFGRIGRLVLR---EALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGD 57
MA ++ INGFGRIGR +LR E+ + VV IND V+ A++L+YDS HGRF +
Sbjct: 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLG-PVETNAHLLRYDSVHGRFPKE 59
Query: 58 VKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKV 117
V+ G+ I V I V P E+PW + + +E TG+F ++D A+ HL+ GAK+V
Sbjct: 60 VEVAGDTIDVGYGPIKVHAVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRV 119
Query: 118 IITAPSKDAPMFVC-GVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTV 176
I++AP+ A + V GVN DK H V+SNASCTTNCLAP+A+V++D I +G MTT+
Sbjct: 120 IVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLAPVAQVLNDTIGIEKGFMTTI 179
Query: 177 HAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVP 236
H+ T Q T+D K ++R R A ++IP STGAAKAV V+P+L+GKL G+A RVP P
Sbjct: 180 HSYTGDQPTLDTMHKDLYR-ARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTP 238
Query: 237 NVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
NVSVVDLT + T +E+ ++ A+ G +KGILGYT++++VS DFN + SSVF
Sbjct: 239 NVSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTDEKLVSHDFNHDSHSSVFHTD 298
Query: 297 AGIALNKNFVKLVTWYDNEYGYSCRVLD 324
++ V++++WYDNE+G+S R+ D
Sbjct: 299 QTKVMDGTMVRILSWYDNEWGFSSRMSD 326
>pdb|1CER|O Chain O, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|P Chain P, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|Q Chain Q, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|R Chain R, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|A Chain A, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|B Chain B, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|C Chain C, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|D Chain D, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
Length = 331
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/331 (50%), Positives = 216/331 (65%), Gaps = 5/331 (1%)
Query: 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
K+GINGFGRIGR V R R V IND LA++LKYDS + RF G+V +
Sbjct: 2 KVGINGFGRIGRQVFRILHSRGVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDDQ 60
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
+ V+GK I P+EIPW++ G ++ESTGVF D A AHL+GGAKKVIITAP+
Sbjct: 61 YLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120
Query: 124 KDAPM-FVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTA 181
K + V GVN + YDPS H ++SNASCTTN LAP+ KV+ + F + + LMTTVH+ T
Sbjct: 121 KGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMKVLEEAFGVEKALMTTVHSYTN 180
Query: 182 TQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVV 241
Q+ +D P K + R R A NIIP +TGAAKA A V+P L+G+ GMA RVP S+
Sbjct: 181 DQRLLDLPHKDL-RRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGSIS 239
Query: 242 DLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIAL 301
D+T L +VT +E+ A +KAA++GP+KGIL YTEDE+V D + SS+ DAK AL
Sbjct: 240 DITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKAL 299
Query: 302 NKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
N VK+ WYDNE+GY+ RV DL++ + K
Sbjct: 300 G-NMVKVFAWYDNEWGYANRVADLVELVLRK 329
>pdb|4DIB|A Chain A, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|B Chain B, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|C Chain C, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|D Chain D, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|E Chain E, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|F Chain F, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|G Chain G, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|H Chain H, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
Length = 345
Score = 290 bits (741), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/321 (47%), Positives = 218/321 (67%), Gaps = 5/321 (1%)
Query: 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEG 62
++ INGFGRIGR+V R+A+ + +V IN + S + LA+++KYD+ HG+F G V+
Sbjct: 6 RVAINGFGRIGRMVFRQAIKESAFEIVAINASYPS-ETLAHLIKYDTVHGKFDGTVEAFE 64
Query: 63 NNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122
++++V+GK I + P+E+PW+ G E ++E+TG F +K+ A H++ GAKKVI+TAP
Sbjct: 65 DHLLVDGKMIRLLNNRDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAP 124
Query: 123 SKDAPM-FVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVT 180
K+ + V GVN D+ D + H+V+SNASCTTNCLAP+ KV+ + F I GLMTTVHA T
Sbjct: 125 GKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMTTVHAYT 184
Query: 181 ATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSV 240
QK +D P K + R R Q+IIP +TGAAKA+AKV+P L GKL GMA RVP PNVS+
Sbjct: 185 NDQKNIDNPHKDL-RRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSL 243
Query: 241 VDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIA 300
VDL V + DVT + I K + G +KGI+ ++E+ +VS DFN S++ D + +
Sbjct: 244 VDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIIDGLSTMV 303
Query: 301 LNKNFVKLVTWYDNEYGYSCR 321
+ VK++ WYDNE+GYS R
Sbjct: 304 MGDRKVKVLAWYDNEWGYSRR 324
>pdb|2G82|O Chain O, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|P Chain P, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|Q Chain Q, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|R Chain R, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|A Chain A, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|B Chain B, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|C Chain C, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|D Chain D, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
Length = 331
Score = 289 bits (739), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/331 (49%), Positives = 215/331 (64%), Gaps = 5/331 (1%)
Query: 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGN 63
K+GINGFGRIGR V R R V IND LA++LKYDS + RF G+V +
Sbjct: 2 KVGINGFGRIGRQVFRILHSRGVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDDQ 60
Query: 64 NIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123
+ V+GK I P+EIPW++ G ++ESTGVF D A AHL+GGAKKVIITAP+
Sbjct: 61 YLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120
Query: 124 KDAPM-FVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTA 181
K + V GVN + YDPS H ++SNAS TTN LAP+ KV+ + F + + LMTTVH+ T
Sbjct: 121 KGEDITIVMGVNHEAYDPSRHHIISNASXTTNSLAPVMKVLEEAFGVEKALMTTVHSYTN 180
Query: 182 TQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVV 241
Q+ +D P K + R R A NIIP +TGAAKA A V+P L+G+ GMA RVP S+
Sbjct: 181 DQRLLDLPHKDL-RRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGSIS 239
Query: 242 DLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIAL 301
D+T L +VT +E+ A +KAA++GP+KGIL YTEDE+V D + SS+ DAK AL
Sbjct: 240 DITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKAL 299
Query: 302 NKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
N VK+ WYDNE+GY+ RV DL++ + K
Sbjct: 300 G-NMVKVFAWYDNEWGYANRVADLVELVLRK 329
>pdb|3GNQ|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|E Chain E, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|F Chain F, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|G Chain G, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|H Chain H, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
Length = 344
Score = 281 bits (720), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/331 (47%), Positives = 205/331 (61%), Gaps = 11/331 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALHRN-----TPVVGINDPHLSVDYLAYMLKYDSTHGRFK 55
M ++ ING+GRIGR LR A + N +V IND A++ +YD+ HG+F
Sbjct: 9 MTIRVAINGYGRIGRNTLR-AFYENGKKHDLEIVAINDLG-DAKTNAHLTQYDTAHGKFP 66
Query: 56 GDVKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAK 115
G+V +G+ +VVNG +I V P E+PW + G + ++E TG F +K+ ASAHLKGGAK
Sbjct: 67 GEVSVDGDYLVVNGDRIRVLANRNPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAK 126
Query: 116 KVIITAP-SKDA-PMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLM 173
KVII+AP KD V GVN D H+V+SNASCTTNCLAPL K ++D + GLM
Sbjct: 127 KVIISAPGGKDVDATIVYGVNHDVLKAEHTVISNASCTTNCLAPLVKPLNDKIGLETGLM 186
Query: 174 TTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRV 233
TT+HA T Q D + + R R A + IP TGAA AV V+P+L GKL G A RV
Sbjct: 187 TTIHAYTNDQVLTDVYHEDL-RRARSATHSQIPTKTGAAAAVGLVLPELNGKLDGYAIRV 245
Query: 234 PVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVF 293
P NVS+VDL+ D T E+ A +K AS+G +KGILGY E +VS DFN SS F
Sbjct: 246 PTINVSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYNEAPLVSIDFNHNPASSTF 305
Query: 294 DAKAGIALNKNFVKLVTWYDNEYGYSCRVLD 324
DA ++ VK+ +WYDNE+G+S R+LD
Sbjct: 306 DATL-TKVSGRLVKVSSWYDNEWGFSNRMLD 335
>pdb|3L0D|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
pdb|3L0D|B Chain B, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
Length = 356
Score = 281 bits (719), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/328 (43%), Positives = 210/328 (64%), Gaps = 6/328 (1%)
Query: 1 MAYKIGINGFGRIGRLVLR---EALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGD 57
M+ ++ INGFGRIGR +LR E+ ++ VV +ND SV+ A++L+YDS HG F G
Sbjct: 22 MSVRVAINGFGRIGRNILRAIIESGRQDIEVVALNDLG-SVETNAHLLRYDSVHGCFPGT 80
Query: 58 VKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKV 117
V+ G+ I + I VF + P ++PW + +E TG+F +D ASAHL GAK+V
Sbjct: 81 VQVVGDAIDIGSSLIKVFAERDPAQLPWKALDIDIALECTGIFTARDKASAHLDAGAKRV 140
Query: 118 IITAPSKDAPMFVC-GVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTV 176
+++APS+ A + V GVN H V+SNASCTTNCLAP+A+V+H+ I +G MTT+
Sbjct: 141 LVSAPSEGADLTVVYGVNHQFLSKEHHVISNASCTTNCLAPVAQVLHNTVGIEKGFMTTI 200
Query: 177 HAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVP 236
H+ T Q +D + ++R R A ++IP STGAAKAV V+P+L+G L G++ RVP P
Sbjct: 201 HSYTGDQPVLDTMHRDLYR-ARAAALSMIPTSTGAAKAVGLVLPELKGLLDGVSIRVPTP 259
Query: 237 NVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
NVSVVDLT T +EI ++ A+QG +KGIL YT++++VS DFN S++F
Sbjct: 260 NVSVVDLTFTAKRSTTIEEINTAIRTAAQGSLKGILDYTDEKLVSCDFNHNPHSAIFHND 319
Query: 297 AGIALNKNFVKLVTWYDNEYGYSCRVLD 324
++ +++ WYDNE+G+S R+ D
Sbjct: 320 QTKVIDGQLCRVLVWYDNEWGFSNRMCD 347
>pdb|3VAZ|P Chain P, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|R Chain R, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|O Chain O, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|Q Chain Q, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|B Chain B, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|A Chain A, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
Length = 344
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 206/336 (61%), Gaps = 12/336 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
MA K+ INGFGRIGRL R VV +ND D LA++LKYD+ GRF G+V+
Sbjct: 9 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFTGEVE 67
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
VNGK++ F + ++PW + ++E TG + KD A AH++ GAKKV+I
Sbjct: 68 VVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 127
Query: 120 TAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
+AP+ D V N + D S +VVS ASCTTN LAP+AKV++D+F ++EGLMTT+HA
Sbjct: 128 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHA 187
Query: 179 VTATQKTVDAPSKKM-WRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
T Q T DAP +K R R A +NIIP STGAAKA+ KVIP+++GKL G A RVPV
Sbjct: 188 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 247
Query: 238 VSVVDLTVRL-CCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
S+ +LTV L DVT +++ +K AS GYTEDE+VSSD G S+FDA
Sbjct: 248 GSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDAT 303
Query: 297 AGIAL---NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
+ ++ VK+ WYDNE Y+ +++ + Y+
Sbjct: 304 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYL 339
>pdb|3LVF|P Chain P, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|R Chain R, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|O Chain O, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|Q Chain Q, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
Length = 338
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 206/336 (61%), Gaps = 12/336 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
MA K+ INGFGRIGRL R VV +ND D LA++LKYD+ GRF G+V+
Sbjct: 3 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFTGEVE 61
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
VNGK++ F + ++PW + ++E TG + KD A AH++ GAKKV+I
Sbjct: 62 VVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 121
Query: 120 TAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
+AP+ D V N + D S +VVS ASCTTN LAP+AKV++D+F ++EGLMTT+HA
Sbjct: 122 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHA 181
Query: 179 VTATQKTVDAPSKKM-WRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
T Q T DAP +K R R A +NIIP STGAAKA+ KVIP+++GKL G A RVPV
Sbjct: 182 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 241
Query: 238 VSVVDLTVRL-CCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
S+ +LTV L DVT +++ +K AS GYTEDE+VSSD G S+FDA
Sbjct: 242 GSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDAT 297
Query: 297 AGIAL---NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
+ ++ VK+ WYDNE Y+ +++ + Y+
Sbjct: 298 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYL 333
>pdb|3K73|Q Chain Q, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|O Chain O, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|P Chain P, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|R Chain R, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3L6O|Q Chain Q, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|P Chain P, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|R Chain R, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|O Chain O, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3LC2|O Chain O, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|Q Chain Q, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|R Chain R, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|P Chain P, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
Length = 336
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 206/336 (61%), Gaps = 12/336 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
MA K+ INGFGRIGRL R VV +ND D LA++LKYD+ GRF G+V+
Sbjct: 1 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFTGEVE 59
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
VNGK++ F + ++PW + ++E TG + KD A AH++ GAKKV+I
Sbjct: 60 VVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 120 TAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
+AP+ D V N + D S +VVS ASCTTN LAP+AKV++D+F ++EGLMTT+HA
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHA 179
Query: 179 VTATQKTVDAPSKKM-WRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
T Q T DAP +K R R A +NIIP STGAAKA+ KVIP+++GKL G A RVPV
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 238 VSVVDLTVRL-CCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
S+ +LTV L DVT +++ +K AS GYTEDE+VSSD G S+FDA
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDAT 295
Query: 297 AGIAL---NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
+ ++ VK+ WYDNE Y+ +++ + Y+
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYL 331
>pdb|3LC7|O Chain O, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|R Chain R, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|Q Chain Q, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|P Chain P, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
Length = 339
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 206/336 (61%), Gaps = 12/336 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
MA K+ INGFGRIGRL R VV +ND D LA++LKYD+ GRF G+V+
Sbjct: 4 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFTGEVE 62
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
VNGK++ F + ++PW + ++E TG + KD A AH++ GAKKV+I
Sbjct: 63 VVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 122
Query: 120 TAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
+AP+ D V N + D S +VVS ASCTTN LAP+AKV++D+F ++EGLMTT+HA
Sbjct: 123 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHA 182
Query: 179 VTATQKTVDAPSKKM-WRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
T Q T DAP +K R R A +NIIP STGAAKA+ KVIP+++GKL G A RVPV
Sbjct: 183 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 242
Query: 238 VSVVDLTVRL-CCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
S+ +LTV L DVT +++ +K AS GYTEDE+VSSD G S+FDA
Sbjct: 243 GSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDAT 298
Query: 297 AGIAL---NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
+ ++ VK+ WYDNE Y+ +++ + Y+
Sbjct: 299 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYL 334
>pdb|3B1J|A Chain A, Crystal Structure Of Dehydrogenese
pdb|3B1J|B Chain B, Crystal Structure Of Dehydrogenese
pdb|3B1K|A Chain A, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|B Chain B, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|G Chain G, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|H Chain H, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B20|A Chain A, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|B Chain B, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|O Chain O, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|P Chain P, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|Q Chain Q, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|R Chain R, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
Length = 339
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 219/338 (64%), Gaps = 8/338 (2%)
Query: 1 MAYKIGINGFGRIGRLVLREALHR---NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGD 57
M ++ INGFGRIGR LR R + VV IN+ A++L+YDS GRF D
Sbjct: 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTS-DARTAAHLLEYDSVLGRFNAD 59
Query: 58 VKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKV 117
+ + N+I VNGK + + P +PW + + ++ESTGVF T + AS H++ GAKKV
Sbjct: 60 ISYDENSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKV 119
Query: 118 IITAPSKDAPM--FVCGVNLDKY-DPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMT 174
+ITAP K + +V GVN +Y +V+SNASCTTNCLAP+AKV+HDNF I++G MT
Sbjct: 120 LITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMT 179
Query: 175 TVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVP 234
T H+ T Q+ +DA + + R R A NI+P +TGAAKAVA VIP+L+GKL G+A RVP
Sbjct: 180 TTHSYTLDQRILDASHRDL-RRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238
Query: 235 VPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFD 294
PNVSVVDL V++ +++ ++ ASQ MKGI+ Y++ +VSSDF G SS+ D
Sbjct: 239 TPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVD 298
Query: 295 AKAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ + ++ + VK++ WYDNE+GYS RV+DL + K
Sbjct: 299 SSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARK 336
>pdb|2D2I|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|B Chain B, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|O Chain O, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|P Chain P, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|Q Chain Q, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|R Chain R, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2DUU|A Chain A, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|B Chain B, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|O Chain O, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|P Chain P, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|Q Chain Q, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|R Chain R, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp
Length = 380
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 219/338 (64%), Gaps = 8/338 (2%)
Query: 1 MAYKIGINGFGRIGRLVLREALHR---NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGD 57
M ++ INGFGRIGR LR R + VV IN+ A++L+YDS GRF D
Sbjct: 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTS-DARTAAHLLEYDSVLGRFNAD 59
Query: 58 VKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKV 117
+ + N+I VNGK + + P +PW + + ++ESTGVF T + AS H++ GAKKV
Sbjct: 60 ISYDENSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKV 119
Query: 118 IITAPSKDAPM--FVCGVNLDKY-DPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMT 174
+ITAP K + +V GVN +Y +V+SNASCTTNCLAP+AKV+HDNF I++G MT
Sbjct: 120 LITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMT 179
Query: 175 TVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVP 234
T H+ T Q+ +DA + + R R A NI+P +TGAAKAVA VIP+L+GKL G+A RVP
Sbjct: 180 TTHSYTLDQRILDASHRDL-RRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238
Query: 235 VPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFD 294
PNVSVVDL V++ +++ ++ ASQ MKGI+ Y++ +VSSDF G SS+ D
Sbjct: 239 TPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVD 298
Query: 295 AKAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ + ++ + VK++ WYDNE+GYS RV+DL + K
Sbjct: 299 SSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARK 336
>pdb|1JN0|O Chain O, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|A Chain A, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|B Chain B, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
Length = 335
Score = 271 bits (692), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 209/332 (62%), Gaps = 5/332 (1%)
Query: 4 KIGINGFGRIGRLVLREALHRNTP--VVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTE 61
K+ INGFGRIGR LR +++P VV IND V +++LKYDS G F DVKT
Sbjct: 3 KVAINGFGRIGRNFLRCWHGKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVKTA 61
Query: 62 GNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITA 121
G++ + GK I V P +PW G + ++E TGVF +D A HL+ GAKKV+ITA
Sbjct: 62 GDSAISVGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITA 121
Query: 122 PSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVT 180
P K D P +V GVN + Y + +++SNASCTTNCLAP KV+ F I++G MTT H+ T
Sbjct: 122 PGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYT 181
Query: 181 ATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSV 240
Q+ +DA + + R R A NI+P STGAAKAVA V+P L+GKL G+A RVP PNVSV
Sbjct: 182 GDQRLLDASHRDL-RRARAACLNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSV 240
Query: 241 VDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIA 300
VDL V++ +E+ A + ++ +KGIL ++ +VS DF SS D+ +
Sbjct: 241 VDLVVQVSKKTFAEEVNAAFRESADQELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMV 300
Query: 301 LNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ + VK++ WYDNE+GYS RV+DL + +K
Sbjct: 301 MGDDMVKVIAWYDNEWGYSQRVVDLADIVANK 332
>pdb|3LC1|P Chain P, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|R Chain R, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|O Chain O, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|Q Chain Q, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution
Length = 336
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 206/336 (61%), Gaps = 12/336 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
MA K+ INGFGRIGRL R VV +ND D LA++LKYD+ GRF G+V+
Sbjct: 1 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFTGEVE 59
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
VNGK++ F + ++PW + ++E TG + KD A AH++ GAKKV+I
Sbjct: 60 VVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 120 TAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
+AP+ D V N + D S +VVS ASCTTN LAP+AKV++D+F ++EGLMTT++A
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTINA 179
Query: 179 VTATQKTVDAPSKKM-WRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
T Q T DAP +K R R A +NIIP STGAAKA+ KVIP+++GKL G A RVPV
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 238 VSVVDLTVRL-CCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
S+ +LTV L DVT +++ +K AS GYTEDE+VSSD G S+FDA
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDAT 295
Query: 297 AGIAL---NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
+ ++ VK+ WYDNE Y+ +++ + Y+
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYL 331
>pdb|3HQ4|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3KV3|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
Length = 336
Score = 269 bits (688), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 205/336 (61%), Gaps = 12/336 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
MA K+ INGFGRIGRL R VV +ND D LA++LKYD+ GRF G+V+
Sbjct: 1 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFTGEVE 59
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
VNGK++ F + ++PW + ++E TG + KD A AH++ GAKKV+I
Sbjct: 60 VVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 120 TAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
+AP+ D V N + D S +VVS AS TTN LAP+AKV++D+F ++EGLMTT+HA
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASSTTNSLAPVAKVLNDDFGLVEGLMTTIHA 179
Query: 179 VTATQKTVDAPSKKM-WRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
T Q T DAP +K R R A +NIIP STGAAKA+ KVIP+++GKL G A RVPV
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 238 VSVVDLTVRLC-CDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
S+ +LTV L DVT +++ +K AS GYTEDE+VSSD G S+FDA
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDAT 295
Query: 297 AGIAL---NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
+ ++ VK+ WYDNE Y+ +++ + Y+
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYL 331
>pdb|3K9Q|Q Chain Q, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|O Chain O, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|P Chain P, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|R Chain R, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3L4S|Q Chain Q, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|P Chain P, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|O Chain O, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|R Chain R, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
Length = 336
Score = 268 bits (686), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 205/336 (61%), Gaps = 12/336 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
MA K+ INGFGRIGRL R VV +ND D LA++LKYD+ GRF G+V+
Sbjct: 1 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFTGEVE 59
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
VNGK++ F + ++PW + ++E TG + KD A AH++ GAKKV+I
Sbjct: 60 VVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 120 TAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
+AP+ D V N + D S +VVS AS TTN LAP+AKV++D+F ++EGLMTT+HA
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASGTTNSLAPVAKVLNDDFGLVEGLMTTIHA 179
Query: 179 VTATQKTVDAPSKKM-WRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
T Q T DAP +K R R A +NIIP STGAAKA+ KVIP+++GKL G A RVPV
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 238 VSVVDLTVRL-CCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
S+ +LTV L DVT +++ +K AS GYTEDE+VSSD G S+FDA
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDAT 295
Query: 297 AGIAL---NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
+ ++ VK+ WYDNE Y+ +++ + Y+
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYL 331
>pdb|1RM3|O Chain O, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|A Chain A, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|B Chain B, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 213/335 (63%), Gaps = 9/335 (2%)
Query: 4 KIGINGFGRIGRLVLREALH--RNTP--VVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
K+ INGFGRIGR LR H +++P VV IND V +++LKYDS G F DVK
Sbjct: 3 KVAINGFGRIGRNFLR-CWHGRKDSPLDVVVINDAG-GVKQASHLLKYDSILGTFDADVK 60
Query: 60 TEGNN-IVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVI 118
T G++ I V+GK I V P +PW G + ++E TGVF +D A HL+ GAKKV+
Sbjct: 61 TAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL 120
Query: 119 ITAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVH 177
ITAP K D P +V GVN + Y + +++SNASCTTNCLAP KV+ F I++G MTT H
Sbjct: 121 ITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 180
Query: 178 AVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
+ T Q+ +DA + + R R A NI+P STGAAKAVA V+P+L+GKL G+A RVP PN
Sbjct: 181 SYTGDQRLLDASHRDL-RRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPN 239
Query: 238 VSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKA 297
VSVVDL V++ +E+ A + ++ +KGIL ++ +VS DF SS D+
Sbjct: 240 VSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSL 299
Query: 298 GIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ + + VK++ WYDNE+GYS RV+DL + +K
Sbjct: 300 TMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANK 334
>pdb|2PKR|O Chain O, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|R Chain R, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|P Chain P, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|Q Chain Q, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|A Chain A, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|B Chain B, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|C Chain C, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|D Chain D, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|H Chain H, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|I Chain I, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|L Chain L, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|M Chain M, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
Length = 365
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 214/338 (63%), Gaps = 9/338 (2%)
Query: 4 KIGINGFGRIGRLVLREALH--RNTP--VVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
K+ INGFGRIGR LR H +++P VV IND V +++LKYDS G F DVK
Sbjct: 3 KVAINGFGRIGRNFLR-CWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVK 60
Query: 60 TEGNN-IVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVI 118
T G++ I V+GK I V P +PW G + ++E TGVF +D A HL+ GAKKV+
Sbjct: 61 TAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL 120
Query: 119 ITAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVH 177
ITAP K D P +V GVN + Y + +++SNASCTTNCLAP KV+ F I++G MTT H
Sbjct: 121 ITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 180
Query: 178 AVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
+ T Q+ +DA + + R R A NI+P STGAAKAVA V+P+L+GKL G+A RVP PN
Sbjct: 181 SYTGDQRLLDASHRDL-RRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPN 239
Query: 238 VSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKA 297
VSVVDL V++ +E+ A + ++ +KGIL ++ +VS DF SS D+
Sbjct: 240 VSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSL 299
Query: 298 GIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSKDTG 335
+ + + VK++ WYDNE+GYS RV+DL + +K G
Sbjct: 300 TMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQG 337
>pdb|1NBO|O Chain O, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|A Chain A, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|B Chain B, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1RM4|O Chain O, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|A Chain A, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|B Chain B, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|2HKI|A Chain A, Crystal Structure Of Photosynthetic
Glyceraldehyde-3-Phosphate Dehydrogenase A4 Isoform
pdb|2PKQ|P Chain P, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|R Chain R, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|S Chain S, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 337
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 213/335 (63%), Gaps = 9/335 (2%)
Query: 4 KIGINGFGRIGRLVLREALH--RNTP--VVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
K+ INGFGRIGR LR H +++P VV IND V +++LKYDS G F DVK
Sbjct: 3 KVAINGFGRIGRNFLR-CWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVK 60
Query: 60 TEGNN-IVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVI 118
T G++ I V+GK I V P +PW G + ++E TGVF +D A HL+ GAKKV+
Sbjct: 61 TAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL 120
Query: 119 ITAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVH 177
ITAP K D P +V GVN + Y + +++SNASCTTNCLAP KV+ F I++G MTT H
Sbjct: 121 ITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 180
Query: 178 AVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
+ T Q+ +DA + + R R A NI+P STGAAKAVA V+P+L+GKL G+A RVP PN
Sbjct: 181 SYTGDQRLLDASHRDL-RRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPN 239
Query: 238 VSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKA 297
VSVVDL V++ +E+ A + ++ +KGIL ++ +VS DF SS D+
Sbjct: 240 VSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSL 299
Query: 298 GIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ + + VK++ WYDNE+GYS RV+DL + +K
Sbjct: 300 TMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANK 334
>pdb|1RM5|O Chain O, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|A Chain A, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|B Chain B, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 213/335 (63%), Gaps = 9/335 (2%)
Query: 4 KIGINGFGRIGRLVLREALH--RNTP--VVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
K+ INGFGRIGR LR H +++P VV IND V +++LKYDS G F DVK
Sbjct: 3 KVAINGFGRIGRNFLR-CWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVK 60
Query: 60 TEGNN-IVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVI 118
T G++ I V+GK I V P +PW G + ++E TGVF +D A HL+ GAKKV+
Sbjct: 61 TAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVL 120
Query: 119 ITAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVH 177
ITAP K D P +V GVN + Y + +++SNASCTTNCLAP KV+ F I++G MTT H
Sbjct: 121 ITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 180
Query: 178 AVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
+ T Q+ +DA + + R R A NI+P STGAAKAVA V+P+L+GKL G+A RVP PN
Sbjct: 181 SYTGDQRLLDAAHRDL-RRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPN 239
Query: 238 VSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKA 297
VSVVDL V++ +E+ A + ++ +KGIL ++ +VS DF SS D+
Sbjct: 240 VSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSL 299
Query: 298 GIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ + + VK++ WYDNE+GYS RV+DL + +K
Sbjct: 300 TMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANK 334
>pdb|3KSD|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSZ|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
Length = 336
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 205/336 (61%), Gaps = 12/336 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
MA K+ INGFGRIGRL R VV +ND D LA++LKYD+ GRF G+V+
Sbjct: 1 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFTGEVE 59
Query: 60 TEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119
VNGK++ F + ++PW + ++E TG + KD A AH++ GAKKV+I
Sbjct: 60 VVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLI 119
Query: 120 TAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHA 178
+AP+ D V N + D S +VVS AS TTN LAP+AKV++D+F ++EGLMTT++A
Sbjct: 120 SAPATGDLKTIVFNTNHQELDGSETVVSGASSTTNSLAPVAKVLNDDFGLVEGLMTTINA 179
Query: 179 VTATQKTVDAPSKKM-WRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
T Q T DAP +K R R A +NIIP STGAAKA+ KVIP+++GKL G A RVPV
Sbjct: 180 YTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 239
Query: 238 VSVVDLTVRLC-CDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAK 296
S+ +LTV L DVT +++ +K AS GYTEDE+VSSD G S+FDA
Sbjct: 240 GSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDAT 295
Query: 297 AGIAL---NKNFVKLVTWYDNEYGYSCRVLDLIQYM 329
+ ++ VK+ WYDNE Y+ +++ + Y+
Sbjct: 296 QTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYL 331
>pdb|1OBF|O Chain O, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution.
pdb|1OBF|P Chain P, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution
Length = 335
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 202/331 (61%), Gaps = 17/331 (5%)
Query: 4 KIGINGFGRIGRLVLREALH----RNTPVVGIND---PHLSVDYLAYMLKYDSTHGRFKG 56
++ ING+GRIGR +LR + +V IND P + A++ +YD+ HG+F G
Sbjct: 3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTN----AHLTRYDTAHGKFPG 58
Query: 57 DVKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKK 116
V G+ +VVNG KI V P ++PW + ++E TG F TK+ A AH+KGGAKK
Sbjct: 59 TVSVNGSYMVVNGDKIRVDANRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKK 118
Query: 117 VIITAPSK---DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLM 173
VII+AP DA + V GVN + +V+SNAS TTNCLAPL K ++D + +GLM
Sbjct: 119 VIISAPGGADVDATV-VYGVNHGTLKSTDTVISNASXTTNCLAPLVKPLNDKLGLQDGLM 177
Query: 174 TTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRV 233
TTVHA T Q D + + R R A ++IP TGAA AV V+P+L+GKL G A RV
Sbjct: 178 TTVHAYTNNQVLTDVYHEDL-RRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRV 236
Query: 234 PVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVF 293
P NVS+VDL+ + T +E+ +KAAS+G +KGIL Y + +VS D+N + SS
Sbjct: 237 PTINVSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYNTEPLVSVDYNHDPASSTV 296
Query: 294 DAKAGIALNKNFVKLVTWYDNEYGYSCRVLD 324
DA ++ VK+ +WYDNE+G+S R+LD
Sbjct: 297 DASL-TKVSGRLVKVSSWYDNEWGFSNRMLD 326
>pdb|3K2B|A Chain A, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|B Chain B, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|C Chain C, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|D Chain D, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|E Chain E, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|F Chain F, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|G Chain G, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|H Chain H, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|O Chain O, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|Q Chain Q, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3QV1|A Chain A, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|B Chain B, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|C Chain C, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|D Chain D, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|E Chain E, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|F Chain F, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3RVD|A Chain A, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|B Chain B, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|C Chain C, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|D Chain D, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|E Chain E, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|F Chain F, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|G Chain G, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|H Chain H, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|O Chain O, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|Q Chain Q, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana
Length = 337
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/328 (46%), Positives = 208/328 (63%), Gaps = 9/328 (2%)
Query: 4 KIGINGFGRIGRLVLREALH--RNTP--VVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
K+ INGFGRIGR LR H +++P ++ IND V +++LKYDST G F DVK
Sbjct: 4 KVAINGFGRIGRNFLR-CWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADVK 61
Query: 60 TEGNN-IVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVI 118
G I V+GK I V P +PW + G + ++E TGVF ++ A H++ GAKKVI
Sbjct: 62 PSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVI 121
Query: 119 ITAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVH 177
ITAP K D P +V GVN D Y ++SNASCTTNCLAP KV+ F I++G MTT H
Sbjct: 122 ITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTH 181
Query: 178 AVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237
+ T Q+ +DA S + R R A NI+P STGAAKAVA V+P+L+GKL G+A RVP PN
Sbjct: 182 SYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPN 240
Query: 238 VSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKA 297
VSVVDL V++ +E+ A + +++ +KGIL ++ +VS DF S+ D+
Sbjct: 241 VSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSL 300
Query: 298 GIALNKNFVKLVTWYDNEYGYSCRVLDL 325
+ + + VK++ WYDNE+GYS RV+DL
Sbjct: 301 TMVMGDDMVKVIAWYDNEWGYSQRVVDL 328
>pdb|2PKQ|O Chain O, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|Q Chain Q, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|T Chain T, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 368
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/338 (45%), Positives = 209/338 (61%), Gaps = 12/338 (3%)
Query: 4 KIGINGFGRIGRLVLREALH--RNTP--VVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK 59
K+ INGFGRIGR LR H +++P VV +ND V ++LKYDS G FK DVK
Sbjct: 3 KVAINGFGRIGRNFLR-CWHGRKDSPLDVVVVNDSG-GVKSATHLLKYDSILGTFKADVK 60
Query: 60 TEGNNIV-VNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVI 118
N ++GK I V P ++PW++ G + ++E TGVF A H++ GAKKVI
Sbjct: 61 IIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVI 120
Query: 119 ITAPSK--DAPMFVCGVNLDKYDPS-HSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTT 175
ITAP+K D P +V GVN Y +++SNASCTTNCLAP KV+ + I++G MTT
Sbjct: 121 ITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTT 180
Query: 176 VHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPV 235
H+ T Q+ +DA S + R R A NI+P STGAAKAV+ V+P L+GKL G+A RVP
Sbjct: 181 THSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPT 239
Query: 236 PNVSVVDLTVRL-CCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFD 294
PNVSVVDL V + VT +++ + A+ GP+KG+L + +VS DF SS D
Sbjct: 240 PNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTID 299
Query: 295 AKAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKSK 332
+ + + + VK+V WYDNE+GYS RV+DL + +K
Sbjct: 300 SSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANK 337
>pdb|2X5J|O Chain O, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|P Chain P, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|Q Chain Q, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|R Chain R, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 194/339 (57%), Gaps = 12/339 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALHRN-----TPVVGINDPHLSVDYLAYMLKYDSTHGRFK 55
M ++ INGFGRIGR V+R AL+ + VV IN+ + +A++LKYD++HGRF
Sbjct: 1 MTVRVAINGFGRIGRNVVR-ALYESGRRAEITVVAINELADAAG-MAHLLKYDTSHGRFA 58
Query: 56 GDVKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAK 115
+V+ E + + V I V + + +PW + G + +++ TGV+ +++ AH+ GAK
Sbjct: 59 WEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAK 118
Query: 116 KVIITAPSK---DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGL 172
KV+ + P DA + V GVN D+ H +VSNASCTTNC+ P+ K++ D + I G
Sbjct: 119 KVLFSHPGSNDLDATV-VYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGT 177
Query: 173 MTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFR 232
+TT+H+ Q+ +DA + R R A+Q+IIP T A + + P + +A R
Sbjct: 178 VTTIHSAMHDQQVIDAYHPDL-RRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVR 236
Query: 233 VPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSV 292
VP NV+ +DL+V + V +E+ ++ A+QG GI+ YTE +VS DFN + S++
Sbjct: 237 VPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAI 296
Query: 293 FDAKAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKS 331
D + +K + W DNE+G++ R+LD M +
Sbjct: 297 VDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMAT 335
>pdb|2XF8|A Chain A, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|B Chain B, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|C Chain C, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|D Chain D, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|E Chain E, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|F Chain F, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|G Chain G, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|H Chain H, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|I Chain I, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|J Chain J, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|K Chain K, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|L Chain L, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|M Chain M, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|N Chain N, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|O Chain O, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|P Chain P, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
Length = 338
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 193/336 (57%), Gaps = 12/336 (3%)
Query: 4 KIGINGFGRIGRLVLREALHRN-----TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDV 58
++ INGFGRIGR V+R AL+ + VV IN+ + +A++LKYD++HGRF +V
Sbjct: 3 RVAINGFGRIGRNVVR-ALYESGRRAEITVVAINELADAAG-MAHLLKYDTSHGRFAWEV 60
Query: 59 KTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVI 118
+ E + + V I V + + +PW + G + +++ TGV+ +++ AH+ GAKKV+
Sbjct: 61 RQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVL 120
Query: 119 ITAPSK---DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGLMTT 175
+ P DA + V GVN D+ H +VSNASCTTNC+ P+ K++ D + I G +TT
Sbjct: 121 FSHPGSNDLDATV-VYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTT 179
Query: 176 VHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPV 235
+H+ Q+ +DA + R R A+Q+IIP T A + + P + +A RVP
Sbjct: 180 IHSAMHDQQVIDAYHPDL-RRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPT 238
Query: 236 PNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDA 295
NV+ +DL+V + V +E+ ++ A+QG GI+ YTE +VS DFN + S++ D
Sbjct: 239 INVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDG 298
Query: 296 KAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKS 331
+ +K + W DNE+G++ R+LD M +
Sbjct: 299 TQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMAT 334
>pdb|2X5K|O Chain O, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|P Chain P, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|Q Chain Q, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|R Chain R, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 217 bits (553), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 192/339 (56%), Gaps = 12/339 (3%)
Query: 1 MAYKIGINGFGRIGRLVLREALHRN-----TPVVGINDPHLSVDYLAYMLKYDSTHGRFK 55
M ++ INGFGRIGR V+R AL+ + VV IN+ + +A++LKYD++HGRF
Sbjct: 1 MTVRVAINGFGRIGRNVVR-ALYESGRRAEITVVAINELADAAG-MAHLLKYDTSHGRFA 58
Query: 56 GDVKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAK 115
+V+ E + + V I V + + +PW + G + +++ TGV+ +++ AH+ GAK
Sbjct: 59 WEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAK 118
Query: 116 KVIITAPSK---DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEILEGL 172
KV+ + P DA + V GVN D+ H +VSNAS TTN + P+ K++ D + I G
Sbjct: 119 KVLFSHPGSNDLDATV-VYGVNQDQLRAEHRIVSNASATTNSIIPVIKLLDDAYGIESGT 177
Query: 173 MTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFR 232
+TT+H+ Q+ +DA + R R A+Q+IIP T A + + P + +A R
Sbjct: 178 VTTIHSAMHDQQVIDAYHPDL-RRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVR 236
Query: 233 VPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSV 292
VP NV+ +DL+V + V +E+ ++ A+QG GI+ YTE +VS DFN + S++
Sbjct: 237 VPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAI 296
Query: 293 FDAKAGIALNKNFVKLVTWYDNEYGYSCRVLDLIQYMKS 331
D + +K + W DNE+G++ R+LD M +
Sbjct: 297 VDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMAT 335
>pdb|3TZ6|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Inhibitor Smcs (Cys) And Phosphate From
Mycobacterium Tuberculosis H37rv
Length = 344
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 63/141 (44%), Gaps = 10/141 (7%)
Query: 47 YDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTA 106
+ ++ RF +++G + G++I V + +G + + S G +K A
Sbjct: 26 FPASAVRFFASARSQGRKLAFRGQEIEVEDAETADP-----SGLDIALFSAGSAMSKVQA 80
Query: 107 SAHLKGGAKKVIITAPSK---DAPMFVCGVNL--DKYDPSHSVVSNASCTTNCLAPLAKV 161
G + ++ + D P+ V VN D + +++N +CTT P+ KV
Sbjct: 81 PRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKV 140
Query: 162 IHDNFEILEGLMTTVHAVTAT 182
+HD ++ ++++ AV+ +
Sbjct: 141 LHDEARLVRLVVSSYQAVSGS 161
>pdb|3VOS|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Glycerol And Sulfate From Mycobacterium
Tuberculosis H37rv
Length = 362
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 63/141 (44%), Gaps = 10/141 (7%)
Query: 47 YDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTA 106
+ ++ RF +++G + G++I V + +G + + S G +K A
Sbjct: 44 FPASAVRFFASARSQGRKLAFRGQEIEVEDAETADP-----SGLDIALFSAGSAMSKVQA 98
Query: 107 SAHLKGGAKKVIITAPSK---DAPMFVCGVNL--DKYDPSHSVVSNASCTTNCLAPLAKV 161
G + ++ + D P+ V VN D + +++N +CTT P+ KV
Sbjct: 99 PRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKV 158
Query: 162 IHDNFEILEGLMTTVHAVTAT 182
+HD ++ ++++ AV+ +
Sbjct: 159 LHDEARLVRLVVSSYQAVSGS 179
>pdb|2YYY|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase
pdb|2YYY|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase
Length = 343
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 215 VAKVIPDLEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVK 261
V V+P+ EGK+ A VP + + L V + DV+ D+I +K
Sbjct: 202 VVSVVPEFEGKILTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIK 248
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,585,492
Number of Sequences: 62578
Number of extensions: 499882
Number of successful extensions: 1345
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1048
Number of HSP's gapped (non-prelim): 75
length of query: 364
length of database: 14,973,337
effective HSP length: 100
effective length of query: 264
effective length of database: 8,715,537
effective search space: 2300901768
effective search space used: 2300901768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)