Query psy8544
Match_columns 364
No_of_seqs 223 out of 1658
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 21:35:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 4E-125 1E-129 918.5 34.5 329 3-331 2-331 (332)
2 3v1y_O PP38, glyceraldehyde-3- 100.0 8E-125 3E-129 917.7 32.1 333 1-333 2-337 (337)
3 3h9e_O Glyceraldehyde-3-phosph 100.0 7E-124 2E-128 913.8 34.2 332 2-333 7-339 (346)
4 4dib_A GAPDH, glyceraldehyde 3 100.0 8E-124 3E-128 911.4 32.2 330 2-333 4-336 (345)
5 3doc_A Glyceraldehyde 3-phosph 100.0 1E-123 4E-128 909.0 32.6 329 1-331 1-333 (335)
6 3ids_C GAPDH, glyceraldehyde-3 100.0 4E-124 1E-128 917.8 26.0 334 1-334 1-355 (359)
7 3lvf_P GAPDH 1, glyceraldehyde 100.0 1E-121 5E-126 894.1 31.3 327 1-332 3-336 (338)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 3E-121 1E-125 896.3 26.8 329 1-331 20-356 (356)
9 2b4r_O Glyceraldehyde-3-phosph 100.0 1E-118 5E-123 878.4 30.8 330 2-331 11-344 (345)
10 1obf_O Glyceraldehyde 3-phosph 100.0 4E-118 1E-122 873.3 32.8 327 3-332 2-334 (335)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 4E-118 1E-122 874.8 27.0 329 1-332 1-340 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 2E-110 5E-115 820.8 31.7 327 3-332 1-329 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 5E-109 2E-113 821.6 32.3 330 1-332 1-336 (380)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 2E-107 7E-112 799.9 32.9 329 2-332 1-334 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 1E-106 3E-111 796.7 33.9 330 1-332 1-336 (339)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 2E-106 5E-111 793.8 31.7 328 3-332 2-332 (334)
17 3cps_A Glyceraldehyde 3-phosph 100.0 6E-106 2E-110 793.8 31.0 331 2-332 17-352 (354)
18 1hdg_O Holo-D-glyceraldehyde-3 100.0 3E-105 1E-109 784.3 32.9 327 3-331 1-331 (332)
19 3e5r_O PP38, glyceraldehyde-3- 100.0 6E-105 2E-109 783.9 32.6 332 1-332 2-336 (337)
20 1gad_O D-glyceraldehyde-3-phos 100.0 9E-105 3E-109 780.5 30.6 326 3-330 2-329 (330)
21 2x5j_O E4PDH, D-erythrose-4-ph 100.0 1E-104 4E-109 782.1 30.0 331 1-333 1-337 (339)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 7E-104 2E-108 775.9 31.5 332 1-332 2-334 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 2.5E-61 8.5E-66 475.0 16.6 239 1-266 1-253 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 2.3E-51 7.9E-56 402.3 22.7 293 3-331 1-329 (331)
25 2hjs_A USG-1 protein homolog; 100.0 4.4E-49 1.5E-53 387.3 23.5 299 1-332 5-336 (340)
26 2r00_A Aspartate-semialdehyde 100.0 2E-48 6.9E-53 382.1 22.9 295 2-331 3-333 (336)
27 1cf2_P Protein (glyceraldehyde 100.0 1.1E-49 3.7E-54 391.3 10.7 271 3-315 2-285 (337)
28 1t4b_A Aspartate-semialdehyde 100.0 5.5E-47 1.9E-51 376.0 10.4 236 3-264 2-299 (367)
29 1b7g_O Protein (glyceraldehyde 100.0 7.5E-46 2.6E-50 364.4 16.0 224 3-265 2-245 (340)
30 2czc_A Glyceraldehyde-3-phosph 100.0 3.7E-46 1.2E-50 365.4 13.7 234 1-266 1-244 (334)
31 2ep5_A 350AA long hypothetical 100.0 5.7E-43 2E-47 345.0 10.6 238 2-265 4-270 (350)
32 1xyg_A Putative N-acetyl-gamma 100.0 7.5E-42 2.6E-46 338.2 16.4 295 2-334 16-348 (359)
33 1ys4_A Aspartate-semialdehyde 100.0 2.9E-41 9.9E-46 333.1 12.6 248 1-273 7-284 (354)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 6.8E-40 2.3E-44 322.6 11.8 289 2-334 4-334 (345)
35 3pwk_A Aspartate-semialdehyde 100.0 3.3E-38 1.1E-42 312.7 20.9 300 1-333 1-345 (366)
36 4dpk_A Malonyl-COA/succinyl-CO 100.0 9.1E-39 3.1E-43 316.2 13.8 302 2-332 7-354 (359)
37 4dpl_A Malonyl-COA/succinyl-CO 100.0 9.1E-39 3.1E-43 316.2 12.4 302 2-332 7-354 (359)
38 3pzr_A Aspartate-semialdehyde 100.0 1.4E-38 4.7E-43 315.7 13.3 232 3-263 1-298 (370)
39 3uw3_A Aspartate-semialdehyde 100.0 1.1E-38 3.7E-43 317.2 12.4 290 2-330 4-375 (377)
40 3tz6_A Aspartate-semialdehyde 100.0 6.5E-37 2.2E-41 301.2 22.7 293 3-330 2-341 (344)
41 3hsk_A Aspartate-semialdehyde 100.0 1.8E-35 6E-40 294.6 16.1 239 2-266 19-301 (381)
42 3dr3_A N-acetyl-gamma-glutamyl 100.0 1.6E-35 5.6E-40 290.6 13.5 290 3-332 5-330 (337)
43 2nqt_A N-acetyl-gamma-glutamyl 100.0 1.1E-32 3.8E-37 272.0 18.9 298 2-334 9-341 (352)
44 1vkn_A N-acetyl-gamma-glutamyl 100.0 3.2E-29 1.1E-33 246.9 12.6 288 2-333 13-339 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.7 4.7E-08 1.6E-12 94.5 10.5 149 2-180 4-163 (312)
46 1f06_A MESO-diaminopimelate D- 97.7 6.2E-05 2.1E-09 72.5 7.8 88 2-123 3-91 (320)
47 3ezy_A Dehydrogenase; structur 97.5 0.00014 4.7E-09 70.0 7.1 96 1-123 1-97 (344)
48 4hkt_A Inositol 2-dehydrogenas 97.5 0.00015 5.1E-09 69.4 7.2 94 1-123 2-96 (331)
49 3mz0_A Inositol 2-dehydrogenas 97.5 0.00017 5.8E-09 69.4 7.0 97 1-123 1-99 (344)
50 3bio_A Oxidoreductase, GFO/IDH 97.4 0.00019 6.3E-09 68.6 6.9 88 2-122 9-97 (304)
51 3e18_A Oxidoreductase; dehydro 97.4 0.00019 6.6E-09 69.7 6.6 93 2-123 5-98 (359)
52 3i23_A Oxidoreductase, GFO/IDH 97.4 0.00038 1.3E-08 67.3 8.1 96 1-123 1-98 (349)
53 3gdo_A Uncharacterized oxidore 97.3 0.00063 2.2E-08 66.0 8.9 91 3-123 6-98 (358)
54 3euw_A MYO-inositol dehydrogen 97.3 0.00046 1.6E-08 66.3 7.9 94 2-123 4-98 (344)
55 2dc1_A L-aspartate dehydrogena 97.3 0.00026 8.8E-09 64.7 5.6 134 3-179 1-136 (236)
56 3ic5_A Putative saccharopine d 97.3 0.00044 1.5E-08 54.9 6.3 96 1-120 4-100 (118)
57 3ohs_X Trans-1,2-dihydrobenzen 97.3 0.00048 1.7E-08 65.9 7.7 96 1-123 1-99 (334)
58 3mtj_A Homoserine dehydrogenas 97.2 0.00063 2.2E-08 68.7 8.2 91 2-122 10-111 (444)
59 3db2_A Putative NADPH-dependen 97.2 0.00064 2.2E-08 65.6 7.3 94 2-123 5-99 (354)
60 3kux_A Putative oxidoreductase 97.2 0.00068 2.3E-08 65.4 7.5 92 2-123 7-100 (352)
61 3f4l_A Putative oxidoreductase 97.2 0.00033 1.1E-08 67.5 5.1 95 1-123 1-98 (345)
62 1p9l_A Dihydrodipicolinate red 97.2 0.0015 5E-08 60.9 9.3 70 3-116 1-72 (245)
63 4f3y_A DHPR, dihydrodipicolina 97.1 0.00031 1.1E-08 66.5 4.6 94 2-119 7-102 (272)
64 3qy9_A DHPR, dihydrodipicolina 97.1 0.00036 1.2E-08 65.1 4.6 32 2-34 3-35 (243)
65 3ec7_A Putative dehydrogenase; 97.1 0.00085 2.9E-08 65.1 7.2 96 2-123 23-120 (357)
66 2ho3_A Oxidoreductase, GFO/IDH 97.1 0.0012 4E-08 62.9 8.0 94 2-123 1-95 (325)
67 2ejw_A HDH, homoserine dehydro 97.1 0.0011 3.9E-08 64.3 8.0 85 1-120 2-96 (332)
68 3ing_A Homoserine dehydrogenas 97.1 0.002 6.8E-08 62.4 9.7 34 1-34 3-43 (325)
69 3e82_A Putative oxidoreductase 97.1 0.0014 4.7E-08 63.8 8.5 92 2-123 7-100 (364)
70 3moi_A Probable dehydrogenase; 97.0 0.00058 2E-08 67.0 5.7 95 1-123 1-97 (387)
71 3rc1_A Sugar 3-ketoreductase; 97.0 0.00081 2.8E-08 65.1 6.4 94 2-123 27-122 (350)
72 3ijp_A DHPR, dihydrodipicolina 97.0 0.00095 3.3E-08 63.7 6.7 95 2-119 21-117 (288)
73 3c1a_A Putative oxidoreductase 97.0 0.00071 2.4E-08 64.2 5.5 92 2-123 10-102 (315)
74 3cea_A MYO-inositol 2-dehydrog 97.0 0.0015 5E-08 62.5 7.8 95 2-123 8-104 (346)
75 1xea_A Oxidoreductase, GFO/IDH 97.0 0.0025 8.5E-08 60.6 9.1 94 1-123 1-96 (323)
76 4had_A Probable oxidoreductase 96.9 0.0013 4.5E-08 63.1 7.1 95 2-123 23-119 (350)
77 3e9m_A Oxidoreductase, GFO/IDH 96.9 0.0011 3.8E-08 63.4 6.3 95 2-123 5-100 (330)
78 3uuw_A Putative oxidoreductase 96.9 0.0026 8.9E-08 60.0 8.6 92 2-123 6-99 (308)
79 3evn_A Oxidoreductase, GFO/IDH 96.9 0.00071 2.4E-08 64.7 4.5 95 2-123 5-100 (329)
80 3q2i_A Dehydrogenase; rossmann 96.9 0.0015 5.1E-08 63.0 6.8 94 2-123 13-108 (354)
81 1tlt_A Putative oxidoreductase 96.8 0.0012 4E-08 62.8 5.8 92 2-123 5-98 (319)
82 2ixa_A Alpha-N-acetylgalactosa 96.8 0.0026 9E-08 63.5 8.7 101 2-123 20-124 (444)
83 4h3v_A Oxidoreductase domain p 96.8 0.00097 3.3E-08 64.2 5.1 97 1-124 5-109 (390)
84 1ydw_A AX110P-like protein; st 96.8 0.0021 7E-08 62.2 7.4 98 2-123 6-104 (362)
85 4gqa_A NAD binding oxidoreduct 96.8 0.0012 4E-08 65.1 5.6 96 2-124 26-130 (412)
86 3c8m_A Homoserine dehydrogenas 96.8 0.00062 2.1E-08 66.0 3.4 33 2-34 6-46 (331)
87 1j5p_A Aspartate dehydrogenase 96.8 0.0014 4.9E-08 61.4 5.5 132 3-180 13-147 (253)
88 4ew6_A D-galactose-1-dehydroge 96.7 0.00044 1.5E-08 66.6 1.9 87 2-123 25-114 (330)
89 3fhl_A Putative oxidoreductase 96.7 0.0012 4.1E-08 64.1 4.9 92 2-123 5-98 (362)
90 3do5_A HOM, homoserine dehydro 96.6 0.0037 1.3E-07 60.5 7.8 33 2-34 2-43 (327)
91 1h6d_A Precursor form of gluco 96.6 0.0031 1.1E-07 62.9 7.3 99 2-123 83-183 (433)
92 3m2t_A Probable dehydrogenase; 96.6 0.0022 7.4E-08 62.3 5.9 94 3-123 6-101 (359)
93 3upl_A Oxidoreductase; rossman 96.6 0.0027 9.2E-08 64.2 6.6 103 2-114 23-133 (446)
94 4fb5_A Probable oxidoreductase 96.4 0.0082 2.8E-07 57.7 8.6 95 2-123 25-127 (393)
95 1zh8_A Oxidoreductase; TM0312, 96.3 0.0064 2.2E-07 58.4 7.2 95 2-123 18-115 (340)
96 3u3x_A Oxidoreductase; structu 96.2 0.0058 2E-07 59.3 6.4 96 2-124 26-122 (361)
97 2glx_A 1,5-anhydro-D-fructose 96.2 0.016 5.5E-07 54.9 9.2 94 3-123 1-95 (332)
98 2p2s_A Putative oxidoreductase 96.2 0.014 4.6E-07 55.7 8.6 94 2-123 4-99 (336)
99 1r0k_A 1-deoxy-D-xylulose 5-ph 96.2 0.0055 1.9E-07 60.8 5.8 106 3-119 5-122 (388)
100 3ip3_A Oxidoreductase, putativ 96.1 0.0017 5.8E-08 62.2 2.0 98 1-123 1-100 (337)
101 1dih_A Dihydrodipicolinate red 96.1 0.0028 9.5E-08 59.8 3.3 98 2-122 5-104 (273)
102 1lc0_A Biliverdin reductase A; 96.0 0.0084 2.9E-07 56.6 6.3 88 2-123 7-98 (294)
103 3ius_A Uncharacterized conserv 96.0 0.053 1.8E-06 49.5 11.4 91 1-120 4-101 (286)
104 3oa2_A WBPB; oxidoreductase, s 95.9 0.0079 2.7E-07 57.4 5.6 95 2-123 3-106 (318)
105 3o9z_A Lipopolysaccaride biosy 95.9 0.0077 2.6E-07 57.4 5.3 95 2-123 3-105 (312)
106 3dty_A Oxidoreductase, GFO/IDH 95.7 0.021 7.1E-07 56.0 7.8 98 2-123 12-118 (398)
107 1ebf_A Homoserine dehydrogenas 95.7 0.011 3.7E-07 57.9 5.7 33 2-34 4-40 (358)
108 3dqp_A Oxidoreductase YLBE; al 95.7 0.031 1.1E-06 49.3 8.1 31 3-33 1-32 (219)
109 3v5n_A Oxidoreductase; structu 95.6 0.022 7.6E-07 56.3 7.6 97 2-123 37-143 (417)
110 2dt5_A AT-rich DNA-binding pro 95.6 0.012 4.1E-07 53.5 5.1 94 3-124 81-175 (211)
111 1y81_A Conserved hypothetical 95.5 0.055 1.9E-06 45.6 8.7 85 2-122 14-102 (138)
112 2vt3_A REX, redox-sensing tran 95.4 0.025 8.6E-07 51.5 6.6 93 3-124 86-180 (215)
113 3btv_A Galactose/lactose metab 95.3 0.0055 1.9E-07 61.1 1.9 98 2-123 20-128 (438)
114 3ggo_A Prephenate dehydrogenas 95.2 0.11 3.6E-06 49.6 10.7 41 2-45 33-75 (314)
115 2nvw_A Galactose/lactose metab 95.2 0.011 3.9E-07 59.8 3.9 98 2-123 39-147 (479)
116 3dhn_A NAD-dependent epimerase 95.1 0.035 1.2E-06 49.0 6.3 31 3-33 5-36 (227)
117 2r6j_A Eugenol synthase 1; phe 95.0 0.041 1.4E-06 51.2 6.9 31 3-33 12-43 (318)
118 4gmf_A Yersiniabactin biosynth 94.9 0.076 2.6E-06 52.1 8.8 90 2-122 7-102 (372)
119 2bma_A Glutamate dehydrogenase 94.9 0.11 3.8E-06 52.6 10.1 100 3-115 253-362 (470)
120 3m2p_A UDP-N-acetylglucosamine 94.9 0.047 1.6E-06 50.7 6.9 33 1-33 1-34 (311)
121 3ew7_A LMO0794 protein; Q8Y8U8 94.9 0.11 3.7E-06 45.2 9.0 32 3-34 1-33 (221)
122 1qyd_A Pinoresinol-lariciresin 94.9 0.04 1.4E-06 50.9 6.4 31 3-33 5-36 (313)
123 3a06_A 1-deoxy-D-xylulose 5-ph 94.8 0.083 2.8E-06 52.0 8.8 106 3-120 4-115 (376)
124 2duw_A Putative COA-binding pr 94.8 0.1 3.5E-06 44.2 8.2 86 2-121 13-102 (145)
125 3keo_A Redox-sensing transcrip 94.7 0.013 4.4E-07 53.5 2.5 95 3-123 85-182 (212)
126 1hdo_A Biliverdin IX beta redu 94.7 0.033 1.1E-06 47.9 5.0 33 1-33 1-35 (206)
127 3abi_A Putative uncharacterize 94.6 0.026 9.1E-07 54.6 4.7 92 2-122 16-108 (365)
128 3d1l_A Putative NADP oxidoredu 94.6 0.068 2.3E-06 48.9 7.3 40 3-44 11-50 (266)
129 3e48_A Putative nucleoside-dip 94.6 0.023 7.7E-07 52.2 3.9 96 3-122 1-106 (289)
130 2nu8_A Succinyl-COA ligase [AD 94.4 0.061 2.1E-06 50.9 6.5 87 2-119 7-94 (288)
131 3c1o_A Eugenol synthase; pheny 94.4 0.054 1.8E-06 50.4 6.0 101 1-119 3-111 (321)
132 3c24_A Putative oxidoreductase 94.3 0.15 5.1E-06 47.3 9.0 41 2-45 11-52 (286)
133 3g0o_A 3-hydroxyisobutyrate de 94.3 0.14 4.7E-06 48.1 8.7 41 2-45 7-47 (303)
134 2d59_A Hypothetical protein PH 94.3 0.16 5.5E-06 42.8 8.3 84 2-121 22-109 (144)
135 3fwz_A Inner membrane protein 94.1 0.096 3.3E-06 43.4 6.4 40 2-44 7-46 (140)
136 2hmt_A YUAA protein; RCK, KTN, 94.1 0.1 3.6E-06 42.2 6.5 30 4-33 8-37 (144)
137 1qyc_A Phenylcoumaran benzylic 93.8 0.071 2.4E-06 49.1 5.6 100 3-120 5-112 (308)
138 3qvo_A NMRA family protein; st 93.8 0.072 2.4E-06 47.7 5.3 32 2-33 23-56 (236)
139 1iuk_A Hypothetical protein TT 93.7 0.15 5.3E-06 42.8 7.1 87 3-123 14-104 (140)
140 3oqb_A Oxidoreductase; structu 93.7 0.046 1.6E-06 53.0 4.2 95 2-123 6-116 (383)
141 3h2s_A Putative NADH-flavin re 93.7 0.12 4E-06 45.3 6.5 31 3-33 1-32 (224)
142 3i6i_A Putative leucoanthocyan 93.7 0.072 2.5E-06 50.4 5.5 98 3-120 11-118 (346)
143 3gpi_A NAD-dependent epimerase 93.3 0.076 2.6E-06 48.6 4.8 33 1-33 1-34 (286)
144 3ff4_A Uncharacterized protein 93.2 0.22 7.4E-06 41.2 7.1 83 3-122 5-91 (122)
145 2yfq_A Padgh, NAD-GDH, NAD-spe 93.2 0.15 5E-06 51.1 7.1 94 3-120 213-320 (421)
146 3r3j_A Glutamate dehydrogenase 93.1 0.25 8.5E-06 49.9 8.6 100 3-115 240-349 (456)
147 1vm6_A DHPR, dihydrodipicolina 93.1 0.16 5.4E-06 46.8 6.5 160 3-240 13-176 (228)
148 2tmg_A Protein (glutamate dehy 93.0 0.27 9.4E-06 49.0 8.6 93 3-119 210-312 (415)
149 1zej_A HBD-9, 3-hydroxyacyl-CO 92.9 0.46 1.6E-05 45.0 9.7 74 3-102 13-86 (293)
150 3b1f_A Putative prephenate deh 92.8 0.34 1.2E-05 44.7 8.6 40 2-44 6-47 (290)
151 3e8x_A Putative NAD-dependent 92.8 0.65 2.2E-05 41.1 10.1 32 2-33 21-53 (236)
152 2gas_A Isoflavone reductase; N 92.7 0.072 2.5E-06 49.0 3.8 32 2-33 2-34 (307)
153 1e6u_A GDP-fucose synthetase; 92.7 0.57 2E-05 43.2 9.9 31 2-32 3-34 (321)
154 1ur5_A Malate dehydrogenase; o 92.5 0.082 2.8E-06 50.3 3.9 33 1-34 1-34 (309)
155 3r6d_A NAD-dependent epimerase 92.3 0.081 2.8E-06 46.6 3.4 32 2-33 4-38 (221)
156 3llv_A Exopolyphosphatase-rela 92.2 0.26 8.9E-06 40.3 6.2 39 3-44 7-45 (141)
157 3ego_A Probable 2-dehydropanto 92.2 0.72 2.5E-05 43.4 10.1 32 1-33 1-32 (307)
158 3mog_A Probable 3-hydroxybutyr 91.9 0.096 3.3E-06 53.2 3.7 40 3-45 6-45 (483)
159 3aog_A Glutamate dehydrogenase 91.8 0.59 2E-05 47.0 9.4 93 3-119 236-337 (440)
160 1oi7_A Succinyl-COA synthetase 91.8 0.17 5.7E-06 47.9 5.1 87 2-119 7-94 (288)
161 4fcc_A Glutamate dehydrogenase 91.7 0.35 1.2E-05 48.7 7.6 100 3-116 236-345 (450)
162 2x4g_A Nucleoside-diphosphate- 91.7 0.25 8.4E-06 46.0 6.2 31 3-33 14-45 (342)
163 3aoe_E Glutamate dehydrogenase 91.6 0.44 1.5E-05 47.6 8.0 86 3-115 219-313 (419)
164 1bgv_A Glutamate dehydrogenase 91.4 0.17 5.8E-06 51.0 4.9 99 3-115 231-340 (449)
165 1lss_A TRK system potassium up 91.2 0.22 7.6E-06 40.0 4.6 36 3-41 5-40 (140)
166 1vpd_A Tartronate semialdehyde 91.2 0.15 5.2E-06 47.2 4.1 40 1-43 4-43 (299)
167 3gt0_A Pyrroline-5-carboxylate 91.1 0.31 1.1E-05 44.2 6.0 42 1-45 1-46 (247)
168 3pp8_A Glyoxylate/hydroxypyruv 91.1 0.19 6.3E-06 48.2 4.6 31 3-33 140-170 (315)
169 4huj_A Uncharacterized protein 90.9 0.17 5.7E-06 45.3 3.9 37 2-40 23-59 (220)
170 3l4b_C TRKA K+ channel protien 90.7 0.28 9.6E-06 43.5 5.2 39 3-44 1-39 (218)
171 2wm3_A NMRA-like family domain 90.6 0.053 1.8E-06 50.0 0.3 31 3-33 6-38 (299)
172 1id1_A Putative potassium chan 90.6 0.28 9.5E-06 40.9 4.8 31 3-33 4-34 (153)
173 4g2n_A D-isomer specific 2-hyd 90.6 0.21 7.2E-06 48.5 4.5 31 3-33 174-204 (345)
174 3st7_A Capsular polysaccharide 90.5 0.52 1.8E-05 44.8 7.2 43 3-46 1-45 (369)
175 3k92_A NAD-GDH, NAD-specific g 90.5 0.76 2.6E-05 45.9 8.6 89 3-115 222-319 (424)
176 3evt_A Phosphoglycerate dehydr 90.4 0.21 7.3E-06 48.0 4.4 31 3-33 138-168 (324)
177 2pi1_A D-lactate dehydrogenase 90.4 0.21 7.2E-06 48.2 4.4 31 3-33 142-172 (334)
178 3mw9_A GDH 1, glutamate dehydr 90.4 1.8 6.3E-05 44.0 11.4 85 3-108 245-338 (501)
179 2hjr_A Malate dehydrogenase; m 90.3 0.16 5.4E-06 48.8 3.4 33 1-34 13-46 (328)
180 1gtm_A Glutamate dehydrogenase 90.2 0.23 8E-06 49.5 4.7 32 3-34 213-245 (419)
181 3two_A Mannitol dehydrogenase; 90.1 0.42 1.4E-05 45.4 6.2 81 4-114 179-259 (348)
182 3hg7_A D-isomer specific 2-hyd 90.1 0.23 7.8E-06 47.9 4.3 31 3-33 141-171 (324)
183 1qp8_A Formate dehydrogenase; 90.1 0.23 7.9E-06 47.2 4.3 30 3-32 125-154 (303)
184 1xdw_A NAD+-dependent (R)-2-hy 90.0 0.24 8.1E-06 47.6 4.4 31 3-33 147-177 (331)
185 2yq5_A D-isomer specific 2-hyd 90.0 0.24 8E-06 48.2 4.3 31 3-33 149-179 (343)
186 3kb6_A D-lactate dehydrogenase 89.8 0.25 8.5E-06 47.7 4.3 30 3-32 142-171 (334)
187 1dxy_A D-2-hydroxyisocaproate 89.8 0.25 8.6E-06 47.5 4.3 31 3-33 146-176 (333)
188 2g76_A 3-PGDH, D-3-phosphoglyc 89.7 0.27 9.2E-06 47.5 4.5 31 3-33 166-196 (335)
189 3gg9_A D-3-phosphoglycerate de 89.6 0.26 9E-06 47.9 4.4 31 3-33 161-191 (352)
190 3jtm_A Formate dehydrogenase, 89.6 0.26 8.9E-06 48.0 4.3 31 3-33 165-195 (351)
191 4ezb_A Uncharacterized conserv 89.6 0.3 1E-05 46.3 4.7 32 1-32 23-55 (317)
192 4ina_A Saccharopine dehydrogen 89.5 0.2 6.9E-06 49.3 3.5 98 3-116 2-103 (405)
193 3k6j_A Protein F01G10.3, confi 89.5 0.73 2.5E-05 46.5 7.7 30 3-32 55-84 (460)
194 1c1d_A L-phenylalanine dehydro 89.5 0.53 1.8E-05 46.0 6.4 31 3-34 176-206 (355)
195 4hy3_A Phosphoglycerate oxidor 89.5 0.27 9.2E-06 48.2 4.3 31 3-33 177-207 (365)
196 4id9_A Short-chain dehydrogena 89.4 2 6.8E-05 40.0 10.2 31 3-33 20-51 (347)
197 1lld_A L-lactate dehydrogenase 89.4 1 3.5E-05 42.1 8.3 31 2-32 7-39 (319)
198 4e5n_A Thermostable phosphite 89.3 0.24 8.3E-06 47.6 3.9 31 3-33 146-176 (330)
199 3ce6_A Adenosylhomocysteinase; 89.3 0.64 2.2E-05 47.3 7.1 30 3-32 275-304 (494)
200 1mx3_A CTBP1, C-terminal bindi 89.3 0.3 1E-05 47.4 4.5 30 3-32 169-198 (347)
201 4dgs_A Dehydrogenase; structur 89.3 0.31 1.1E-05 47.2 4.5 30 3-32 172-201 (340)
202 1gdh_A D-glycerate dehydrogena 89.2 0.31 1.1E-05 46.6 4.5 31 3-33 147-177 (320)
203 2c5a_A GDP-mannose-3', 5'-epim 89.2 0.3 1E-05 46.8 4.4 31 3-33 30-61 (379)
204 3gvx_A Glycerate dehydrogenase 89.2 0.25 8.4E-06 46.9 3.7 31 3-33 123-153 (290)
205 2yv1_A Succinyl-COA ligase [AD 89.2 0.48 1.7E-05 44.8 5.7 89 3-122 14-104 (294)
206 3hwr_A 2-dehydropantoate 2-red 89.1 2.4 8.2E-05 39.9 10.6 80 2-101 19-98 (318)
207 2cuk_A Glycerate dehydrogenase 89.0 0.32 1.1E-05 46.3 4.4 31 3-33 145-175 (311)
208 2i76_A Hypothetical protein; N 88.9 0.14 4.9E-06 47.4 1.8 41 1-44 1-41 (276)
209 1zcj_A Peroxisomal bifunctiona 88.9 0.88 3E-05 45.6 7.7 38 3-43 38-75 (463)
210 3c85_A Putative glutathione-re 88.8 0.53 1.8E-05 40.3 5.3 38 3-43 40-78 (183)
211 2wtb_A MFP2, fatty acid multif 88.7 0.49 1.7E-05 50.3 6.0 39 3-44 313-351 (725)
212 1wwk_A Phosphoglycerate dehydr 88.7 0.34 1.2E-05 46.1 4.3 31 3-33 143-173 (307)
213 2g1u_A Hypothetical protein TM 88.7 0.42 1.4E-05 40.0 4.5 31 3-33 20-50 (155)
214 3fpc_A NADP-dependent alcohol 88.7 1.9 6.5E-05 40.9 9.6 96 4-119 169-265 (352)
215 1j4a_A D-LDH, D-lactate dehydr 88.6 0.35 1.2E-05 46.5 4.3 31 3-33 147-177 (333)
216 2gcg_A Glyoxylate reductase/hy 88.5 0.38 1.3E-05 46.1 4.6 31 3-33 156-186 (330)
217 2ew2_A 2-dehydropantoate 2-red 88.5 0.38 1.3E-05 44.4 4.4 42 1-45 2-43 (316)
218 3l9w_A Glutathione-regulated p 88.4 0.62 2.1E-05 46.1 6.2 40 3-45 5-44 (413)
219 3ba1_A HPPR, hydroxyphenylpyru 88.4 0.39 1.3E-05 46.3 4.5 30 3-32 165-194 (333)
220 2ekl_A D-3-phosphoglycerate de 88.4 0.38 1.3E-05 45.9 4.4 31 3-33 143-173 (313)
221 2z2v_A Hypothetical protein PH 88.3 0.44 1.5E-05 46.4 4.9 92 3-122 17-108 (365)
222 3qha_A Putative oxidoreductase 88.3 0.35 1.2E-05 45.2 4.1 32 2-33 15-46 (296)
223 3oet_A Erythronate-4-phosphate 88.2 0.37 1.3E-05 47.6 4.3 30 3-32 120-149 (381)
224 2o4c_A Erythronate-4-phosphate 88.2 0.37 1.3E-05 47.4 4.4 30 3-32 117-146 (380)
225 2yv2_A Succinyl-COA synthetase 88.2 0.7 2.4E-05 43.8 6.2 88 3-122 14-105 (297)
226 2w2k_A D-mandelate dehydrogena 88.2 0.41 1.4E-05 46.3 4.6 31 3-33 164-195 (348)
227 1y1p_A ARII, aldehyde reductas 88.1 2.5 8.4E-05 38.9 9.8 31 3-33 12-43 (342)
228 2vns_A Metalloreductase steap3 88.0 0.45 1.5E-05 42.4 4.5 31 3-33 29-59 (215)
229 1sc6_A PGDH, D-3-phosphoglycer 87.9 0.4 1.4E-05 47.5 4.4 30 3-32 146-175 (404)
230 2d0i_A Dehydrogenase; structur 87.7 0.41 1.4E-05 46.0 4.3 31 3-33 147-177 (333)
231 2v6b_A L-LDH, L-lactate dehydr 87.7 0.84 2.9E-05 43.0 6.3 29 3-31 1-31 (304)
232 1yqd_A Sinapyl alcohol dehydro 87.6 0.55 1.9E-05 45.1 5.2 30 4-33 190-219 (366)
233 2dbq_A Glyoxylate reductase; D 87.6 0.44 1.5E-05 45.7 4.4 31 3-33 151-181 (334)
234 2zcu_A Uncharacterized oxidore 87.5 0.17 5.8E-06 45.9 1.3 30 4-33 1-33 (286)
235 2nac_A NAD-dependent formate d 87.5 0.42 1.4E-05 47.3 4.3 31 3-33 192-222 (393)
236 3oh8_A Nucleoside-diphosphate 87.5 1.6 5.5E-05 43.9 8.6 33 2-34 147-180 (516)
237 3gg2_A Sugar dehydrogenase, UD 87.2 0.48 1.6E-05 47.5 4.5 43 1-46 1-43 (450)
238 2bka_A CC3, TAT-interacting pr 87.1 1.1 3.8E-05 39.4 6.5 31 3-33 19-52 (242)
239 2j6i_A Formate dehydrogenase; 87.1 0.49 1.7E-05 46.1 4.4 31 3-33 165-196 (364)
240 3d0o_A L-LDH 1, L-lactate dehy 86.9 0.67 2.3E-05 44.1 5.2 32 2-34 6-39 (317)
241 3d4o_A Dipicolinate synthase s 86.6 0.56 1.9E-05 43.8 4.4 31 3-33 156-186 (293)
242 1yb4_A Tartronic semialdehyde 86.4 0.4 1.4E-05 44.1 3.2 31 2-32 3-33 (295)
243 3l6d_A Putative oxidoreductase 86.2 0.64 2.2E-05 43.7 4.6 41 2-45 9-49 (306)
244 3k5p_A D-3-phosphoglycerate de 86.1 0.57 1.9E-05 46.7 4.3 30 3-32 157-186 (416)
245 3dtt_A NADP oxidoreductase; st 86.0 0.69 2.4E-05 41.9 4.6 32 2-33 19-50 (245)
246 2ahr_A Putative pyrroline carb 86.0 0.66 2.3E-05 42.0 4.4 40 2-44 3-42 (259)
247 1guz_A Malate dehydrogenase; o 86.0 1.2 4E-05 42.1 6.3 29 3-31 1-31 (310)
248 2jl1_A Triphenylmethane reduct 85.9 0.39 1.3E-05 43.6 2.8 30 4-33 2-34 (287)
249 3dfz_A SIRC, precorrin-2 dehyd 85.9 2.2 7.5E-05 38.8 7.9 31 3-33 32-62 (223)
250 1t2d_A LDH-P, L-lactate dehydr 85.9 0.55 1.9E-05 44.9 4.0 32 2-34 4-36 (322)
251 1v9l_A Glutamate dehydrogenase 85.8 2.3 7.9E-05 42.4 8.6 32 3-34 211-242 (421)
252 2rir_A Dipicolinate synthase, 85.8 0.65 2.2E-05 43.5 4.4 31 3-33 158-188 (300)
253 3pef_A 6-phosphogluconate dehy 85.8 0.68 2.3E-05 42.8 4.5 30 3-32 2-31 (287)
254 2f1k_A Prephenate dehydrogenas 85.8 1.1 3.9E-05 40.8 6.0 39 3-44 1-39 (279)
255 4g65_A TRK system potassium up 85.7 0.67 2.3E-05 46.5 4.7 41 2-45 3-43 (461)
256 3i83_A 2-dehydropantoate 2-red 85.7 0.67 2.3E-05 43.7 4.4 33 1-33 1-33 (320)
257 4b4o_A Epimerase family protei 85.5 0.71 2.4E-05 42.3 4.5 31 3-33 1-32 (298)
258 3sc6_A DTDP-4-dehydrorhamnose 85.4 0.44 1.5E-05 43.3 3.0 33 1-33 4-37 (287)
259 4dll_A 2-hydroxy-3-oxopropiona 85.4 0.68 2.3E-05 43.8 4.4 39 3-44 32-70 (320)
260 3cky_A 2-hydroxymethyl glutara 85.3 0.67 2.3E-05 42.8 4.2 39 2-43 4-42 (301)
261 4gbj_A 6-phosphogluconate dehy 85.3 0.59 2E-05 44.0 3.9 32 1-32 4-35 (297)
262 1y6j_A L-lactate dehydrogenase 85.2 1.2 4.1E-05 42.4 6.0 30 2-31 7-38 (318)
263 1jay_A Coenzyme F420H2:NADP+ o 84.8 0.9 3.1E-05 39.6 4.6 31 3-33 1-32 (212)
264 3doj_A AT3G25530, dehydrogenas 84.7 0.81 2.8E-05 43.0 4.5 31 3-33 22-52 (310)
265 2h78_A Hibadh, 3-hydroxyisobut 84.6 0.75 2.6E-05 42.7 4.2 40 3-45 4-43 (302)
266 1uuf_A YAHK, zinc-type alcohol 84.6 0.84 2.9E-05 44.0 4.6 30 4-33 197-226 (369)
267 3hn2_A 2-dehydropantoate 2-red 84.4 0.7 2.4E-05 43.4 3.9 33 1-33 1-33 (312)
268 1z82_A Glycerol-3-phosphate de 84.4 0.84 2.9E-05 43.2 4.5 41 1-44 13-53 (335)
269 1ff9_A Saccharopine reductase; 84.3 1.4 5E-05 43.9 6.4 90 3-114 4-93 (450)
270 3g17_A Similar to 2-dehydropan 84.1 0.57 2E-05 43.6 3.2 33 1-33 1-33 (294)
271 3p7m_A Malate dehydrogenase; p 84.1 0.69 2.3E-05 44.3 3.7 30 2-31 5-35 (321)
272 3ip1_A Alcohol dehydrogenase, 84.0 3 0.0001 40.4 8.5 39 4-45 216-255 (404)
273 2raf_A Putative dinucleotide-b 84.0 0.94 3.2E-05 40.1 4.4 29 3-31 20-48 (209)
274 2pv7_A T-protein [includes: ch 84.0 0.98 3.4E-05 42.2 4.7 31 2-32 21-52 (298)
275 3ktd_A Prephenate dehydrogenas 83.8 1.6 5.5E-05 42.1 6.3 40 3-45 9-48 (341)
276 3eag_A UDP-N-acetylmuramate:L- 83.7 3.9 0.00013 38.6 8.9 91 3-121 5-96 (326)
277 3jv7_A ADH-A; dehydrogenase, n 83.4 3.3 0.00011 39.0 8.2 87 4-114 174-264 (345)
278 2axq_A Saccharopine dehydrogen 83.4 1 3.4E-05 45.4 4.8 93 3-120 24-117 (467)
279 2gn4_A FLAA1 protein, UDP-GLCN 83.3 1.8 6.3E-05 40.9 6.4 31 3-33 22-55 (344)
280 2gf2_A Hibadh, 3-hydroxyisobut 83.3 0.88 3E-05 41.9 4.0 30 3-32 1-30 (296)
281 3uog_A Alcohol dehydrogenase; 83.2 3 0.0001 39.8 7.9 39 4-45 192-230 (363)
282 3kkj_A Amine oxidase, flavin-c 83.2 1.1 3.9E-05 37.7 4.4 33 1-33 1-33 (336)
283 4ej6_A Putative zinc-binding d 83.1 1.9 6.6E-05 41.4 6.5 38 4-44 185-223 (370)
284 1ygy_A PGDH, D-3-phosphoglycer 83.0 0.97 3.3E-05 46.2 4.5 31 3-33 143-173 (529)
285 2g5c_A Prephenate dehydrogenas 83.0 1.1 3.7E-05 41.1 4.5 39 3-44 2-42 (281)
286 1bg6_A N-(1-D-carboxylethyl)-L 82.8 1.1 3.6E-05 42.3 4.5 40 2-44 4-43 (359)
287 2cvz_A Dehydrogenase, 3-hydrox 82.8 0.94 3.2E-05 41.4 4.0 29 3-32 2-30 (289)
288 1i36_A Conserved hypothetical 82.8 0.94 3.2E-05 41.0 4.0 29 3-31 1-29 (264)
289 3vps_A TUNA, NAD-dependent epi 82.7 1.2 4E-05 40.7 4.6 32 2-33 7-39 (321)
290 2x0j_A Malate dehydrogenase; o 82.5 3.9 0.00013 38.7 8.3 22 3-24 1-22 (294)
291 3oj0_A Glutr, glutamyl-tRNA re 82.5 0.83 2.9E-05 37.6 3.2 36 3-41 22-57 (144)
292 3dfu_A Uncharacterized protein 82.5 0.45 1.5E-05 43.8 1.7 32 2-33 6-37 (232)
293 1wdk_A Fatty oxidation complex 82.4 0.59 2E-05 49.6 2.7 38 3-43 315-352 (715)
294 2rcy_A Pyrroline carboxylate r 82.4 0.88 3E-05 41.1 3.6 30 2-31 4-37 (262)
295 3g79_A NDP-N-acetyl-D-galactos 82.2 3.7 0.00012 41.5 8.4 31 2-32 18-50 (478)
296 4e21_A 6-phosphogluconate dehy 82.0 1.2 4E-05 43.3 4.5 40 3-45 23-62 (358)
297 2ydy_A Methionine adenosyltran 81.9 1.3 4.4E-05 40.7 4.6 32 1-32 1-33 (315)
298 2uyy_A N-PAC protein; long-cha 81.9 1.2 4.2E-05 41.5 4.5 30 3-32 31-60 (316)
299 2d8a_A PH0655, probable L-thre 81.9 2.1 7.2E-05 40.5 6.2 38 4-44 170-208 (348)
300 2yjz_A Metalloreductase steap4 82.7 0.28 9.6E-06 43.6 0.0 30 2-31 19-48 (201)
301 1ks9_A KPA reductase;, 2-dehyd 81.8 1.2 4.2E-05 40.4 4.4 31 3-33 1-31 (291)
302 1evy_A Glycerol-3-phosphate de 81.7 0.89 3E-05 43.5 3.5 42 1-45 13-55 (366)
303 1ldn_A L-lactate dehydrogenase 81.7 1.3 4.6E-05 41.9 4.7 32 2-34 6-39 (316)
304 3pdu_A 3-hydroxyisobutyrate de 81.6 0.9 3.1E-05 41.9 3.4 31 3-33 2-32 (287)
305 3d64_A Adenosylhomocysteinase; 81.2 1.2 4.2E-05 45.3 4.5 30 3-32 278-307 (494)
306 1piw_A Hypothetical zinc-type 81.1 2.4 8.3E-05 40.3 6.4 30 4-33 182-211 (360)
307 3m6i_A L-arabinitol 4-dehydrog 80.8 1.5 5.2E-05 41.7 4.8 38 4-44 182-220 (363)
308 4e12_A Diketoreductase; oxidor 80.8 1.5 5.2E-05 40.5 4.7 40 3-45 5-44 (283)
309 1leh_A Leucine dehydrogenase; 80.8 2.1 7.1E-05 41.8 5.8 37 3-42 174-210 (364)
310 1yqg_A Pyrroline-5-carboxylate 80.3 1.2 4.1E-05 40.2 3.7 39 3-44 1-40 (263)
311 2cf5_A Atccad5, CAD, cinnamyl 80.3 0.84 2.9E-05 43.6 2.8 30 4-33 183-212 (357)
312 1np3_A Ketol-acid reductoisome 80.2 1.5 5E-05 41.9 4.5 31 3-33 17-47 (338)
313 2qyt_A 2-dehydropantoate 2-red 80.2 1 3.6E-05 41.6 3.3 32 2-33 8-45 (317)
314 3nep_X Malate dehydrogenase; h 80.1 0.95 3.3E-05 43.2 3.1 29 3-31 1-31 (314)
315 2p4q_A 6-phosphogluconate dehy 80.0 1.4 4.9E-05 44.6 4.5 42 1-45 9-50 (497)
316 2iz1_A 6-phosphogluconate dehy 79.9 1.5 5.1E-05 44.0 4.6 41 2-45 5-45 (474)
317 1ek6_A UDP-galactose 4-epimera 79.8 1.7 5.9E-05 40.3 4.8 33 1-33 1-34 (348)
318 2a35_A Hypothetical protein PA 79.6 1.4 4.7E-05 37.9 3.7 33 1-33 4-39 (215)
319 4dvj_A Putative zinc-dependent 79.6 1.6 5.5E-05 41.8 4.5 90 4-115 174-265 (363)
320 3tri_A Pyrroline-5-carboxylate 79.0 1.8 6.2E-05 40.1 4.6 41 2-45 3-46 (280)
321 1e3j_A NADP(H)-dependent ketos 79.0 6.8 0.00023 37.0 8.7 38 4-44 171-208 (352)
322 3n58_A Adenosylhomocysteinase; 79.0 1.6 5.3E-05 44.1 4.3 29 3-31 248-276 (464)
323 3h9u_A Adenosylhomocysteinase; 78.9 1.6 5.4E-05 43.8 4.3 31 3-34 212-242 (436)
324 1pl8_A Human sorbitol dehydrog 78.9 4.7 0.00016 38.2 7.6 38 4-44 174-212 (356)
325 3qwb_A Probable quinone oxidor 78.9 3 0.0001 39.1 6.2 39 4-45 151-190 (334)
326 1v8b_A Adenosylhomocysteinase; 78.9 1.2 4.3E-05 45.1 3.6 30 3-32 258-287 (479)
327 3qsg_A NAD-binding phosphogluc 78.8 1.3 4.6E-05 41.6 3.7 30 3-32 25-55 (312)
328 2d4a_B Malate dehydrogenase; a 78.8 1.3 4.4E-05 42.0 3.5 30 4-34 1-31 (308)
329 3phh_A Shikimate dehydrogenase 78.7 13 0.00044 34.6 10.4 31 4-34 120-150 (269)
330 3ghy_A Ketopantoate reductase 78.6 1.8 6.2E-05 41.0 4.5 31 2-32 3-33 (335)
331 2dq4_A L-threonine 3-dehydroge 78.6 1.7 5.8E-05 41.1 4.3 30 4-33 167-197 (343)
332 3goh_A Alcohol dehydrogenase, 78.4 2.1 7.1E-05 39.9 4.8 29 4-32 145-173 (315)
333 3krt_A Crotonyl COA reductase; 78.2 3.1 0.00011 41.1 6.3 39 4-45 231-270 (456)
334 2b5w_A Glucose dehydrogenase; 78.1 2.5 8.7E-05 40.1 5.4 31 3-33 174-207 (357)
335 1vj0_A Alcohol dehydrogenase, 78.1 2.5 8.7E-05 40.6 5.5 39 4-45 198-237 (380)
336 3c7a_A Octopine dehydrogenase; 78.0 1.5 5.2E-05 42.5 3.9 32 1-32 1-33 (404)
337 1pgj_A 6PGDH, 6-PGDH, 6-phosph 77.9 1.8 6.1E-05 43.6 4.4 40 3-45 2-41 (478)
338 2yy7_A L-threonine dehydrogena 77.6 1.4 4.8E-05 40.2 3.3 33 1-33 1-36 (312)
339 1xa0_A Putative NADPH dependen 77.5 4.9 0.00017 37.4 7.2 31 4-34 152-183 (328)
340 3gvi_A Malate dehydrogenase; N 77.4 2.1 7.1E-05 41.1 4.5 30 2-31 7-37 (324)
341 3uko_A Alcohol dehydrogenase c 77.1 4.2 0.00014 38.9 6.7 29 4-32 196-225 (378)
342 4a2c_A Galactitol-1-phosphate 77.0 5.7 0.0002 37.1 7.5 92 4-114 163-254 (346)
343 1q0q_A 1-deoxy-D-xylulose 5-ph 77.0 1.7 5.7E-05 43.1 3.8 115 3-120 10-131 (406)
344 2zyd_A 6-phosphogluconate dehy 76.9 3.3 0.00011 41.7 6.1 41 2-45 15-55 (480)
345 3s2e_A Zinc-containing alcohol 76.8 1.8 6.3E-05 40.7 4.0 39 4-45 169-207 (340)
346 1txg_A Glycerol-3-phosphate de 76.5 1.8 6.1E-05 40.4 3.8 31 3-33 1-31 (335)
347 3nzo_A UDP-N-acetylglucosamine 76.3 4.3 0.00015 39.3 6.6 31 3-33 36-68 (399)
348 3ruf_A WBGU; rossmann fold, UD 76.2 2.4 8.1E-05 39.5 4.6 33 2-34 25-58 (351)
349 1yj8_A Glycerol-3-phosphate de 75.9 1.5 5.1E-05 42.2 3.2 33 1-33 20-59 (375)
350 3ldh_A Lactate dehydrogenase; 75.9 5.5 0.00019 38.3 7.1 139 3-169 22-182 (330)
351 3zwc_A Peroxisomal bifunctiona 75.6 2.5 8.5E-05 45.1 5.0 145 4-168 318-487 (742)
352 2izz_A Pyrroline-5-carboxylate 75.4 2.2 7.5E-05 40.2 4.1 32 2-33 22-57 (322)
353 2pgd_A 6-phosphogluconate dehy 75.2 2.3 8E-05 42.7 4.4 40 3-45 3-42 (482)
354 3gvp_A Adenosylhomocysteinase 75.1 2.3 8E-05 42.5 4.3 29 3-31 221-249 (435)
355 3slg_A PBGP3 protein; structur 75.0 2.2 7.6E-05 40.1 4.0 33 2-34 24-58 (372)
356 2jhf_A Alcohol dehydrogenase E 74.8 5.6 0.00019 37.9 6.9 29 4-32 194-223 (374)
357 3jyn_A Quinone oxidoreductase; 74.7 2.7 9.2E-05 39.3 4.5 39 4-45 143-182 (325)
358 1mv8_A GMD, GDP-mannose 6-dehy 74.6 2.2 7.6E-05 42.1 4.1 40 3-45 1-40 (436)
359 4gwg_A 6-phosphogluconate dehy 74.4 2.5 8.6E-05 42.8 4.4 41 2-45 4-44 (484)
360 1p0f_A NADP-dependent alcohol 74.2 4 0.00014 38.9 5.7 29 4-32 194-223 (373)
361 1t2a_A GDP-mannose 4,6 dehydra 74.1 2.9 9.9E-05 39.4 4.6 33 1-33 23-56 (375)
362 1rjw_A ADH-HT, alcohol dehydro 73.9 4.6 0.00016 38.0 6.0 38 4-44 167-204 (339)
363 3obb_A Probable 3-hydroxyisobu 73.8 2.7 9.3E-05 39.6 4.3 41 3-46 4-44 (300)
364 3fbg_A Putative arginate lyase 73.5 3.2 0.00011 39.2 4.8 89 4-114 153-242 (346)
365 2aef_A Calcium-gated potassium 73.5 1.8 6.1E-05 38.5 2.8 29 3-32 10-38 (234)
366 1f8f_A Benzyl alcohol dehydrog 73.2 2.6 8.9E-05 40.2 4.1 38 4-44 193-231 (371)
367 2o3j_A UDP-glucose 6-dehydroge 73.0 2.2 7.4E-05 42.9 3.6 41 2-45 9-51 (481)
368 1vl0_A DTDP-4-dehydrorhamnose 72.9 4.8 0.00016 36.3 5.6 30 3-32 13-43 (292)
369 3ado_A Lambda-crystallin; L-gu 72.5 5 0.00017 38.4 5.8 39 3-44 7-45 (319)
370 2q3e_A UDP-glucose 6-dehydroge 72.4 2.3 7.9E-05 42.4 3.6 39 3-44 6-46 (467)
371 2fp4_A Succinyl-COA ligase [GD 72.3 4 0.00014 38.7 5.0 86 3-119 14-101 (305)
372 1e3i_A Alcohol dehydrogenase, 72.2 4.5 0.00015 38.6 5.5 29 4-32 198-227 (376)
373 2y1e_A 1-deoxy-D-xylulose 5-ph 72.0 2.8 9.4E-05 41.4 3.9 108 3-120 22-135 (398)
374 1n7h_A GDP-D-mannose-4,6-dehyd 71.9 3.5 0.00012 39.0 4.6 31 3-33 29-60 (381)
375 1cdo_A Alcohol dehydrogenase; 71.7 5.4 0.00018 38.0 5.9 29 4-32 195-224 (374)
376 3nx4_A Putative oxidoreductase 71.6 4.2 0.00014 37.8 5.0 30 4-33 149-179 (324)
377 2d5c_A AROE, shikimate 5-dehyd 71.5 3.4 0.00012 37.6 4.3 30 4-33 118-147 (263)
378 2cdc_A Glucose dehydrogenase g 71.5 2.3 7.7E-05 40.6 3.2 30 4-33 183-212 (366)
379 4g65_A TRK system potassium up 71.3 1.7 6E-05 43.5 2.4 92 4-119 237-331 (461)
380 4h7p_A Malate dehydrogenase; s 71.2 10 0.00035 36.6 7.7 23 2-24 24-47 (345)
381 1rpn_A GDP-mannose 4,6-dehydra 71.0 3.7 0.00013 37.8 4.5 32 2-33 14-46 (335)
382 2dph_A Formaldehyde dismutase; 71.0 7.7 0.00026 37.3 6.9 38 4-44 188-226 (398)
383 1f0y_A HCDH, L-3-hydroxyacyl-C 70.9 3.8 0.00013 38.0 4.5 38 3-43 16-53 (302)
384 3ay3_A NAD-dependent epimerase 70.8 1.4 4.7E-05 39.7 1.4 33 1-33 1-34 (267)
385 2dpo_A L-gulonate 3-dehydrogen 70.8 5.9 0.0002 37.6 5.9 40 3-45 7-46 (319)
386 2rh8_A Anthocyanidin reductase 70.7 3.8 0.00013 37.9 4.5 32 1-32 8-40 (338)
387 2vhw_A Alanine dehydrogenase; 70.5 3.7 0.00012 39.9 4.4 38 3-43 169-206 (377)
388 4hv4_A UDP-N-acetylmuramate--L 70.3 12 0.00041 37.5 8.3 83 3-114 23-106 (494)
389 3ko8_A NAD-dependent epimerase 70.1 3.9 0.00013 37.2 4.3 31 3-33 1-32 (312)
390 2fzw_A Alcohol dehydrogenase c 70.0 5.3 0.00018 38.0 5.4 29 4-32 193-222 (373)
391 1xq6_A Unknown protein; struct 69.8 4.7 0.00016 35.1 4.7 32 2-33 4-38 (253)
392 1pjq_A CYSG, siroheme synthase 69.6 13 0.00045 36.9 8.4 93 3-123 13-107 (457)
393 2y0c_A BCEC, UDP-glucose dehyd 69.3 4 0.00014 41.1 4.5 42 2-46 8-49 (478)
394 3q2o_A Phosphoribosylaminoimid 68.8 4.2 0.00014 39.1 4.4 31 3-33 15-45 (389)
395 3lk7_A UDP-N-acetylmuramoylala 68.8 15 0.00051 36.2 8.6 89 3-120 10-101 (451)
396 2c20_A UDP-glucose 4-epimerase 68.7 4.3 0.00015 37.3 4.3 31 3-33 2-33 (330)
397 1xgk_A Nitrogen metabolite rep 68.5 4.6 0.00016 38.3 4.6 32 2-33 5-37 (352)
398 3mwd_B ATP-citrate synthase; A 68.3 9 0.00031 36.9 6.6 95 3-122 11-114 (334)
399 3k96_A Glycerol-3-phosphate de 68.0 5 0.00017 38.7 4.8 41 2-45 29-69 (356)
400 4a0s_A Octenoyl-COA reductase/ 67.7 7.5 0.00026 38.0 6.1 39 4-45 223-262 (447)
401 3nkl_A UDP-D-quinovosamine 4-d 67.5 4.9 0.00017 32.5 4.0 32 3-34 5-37 (141)
402 1gpj_A Glutamyl-tRNA reductase 67.2 3.7 0.00013 40.2 3.7 31 3-33 168-199 (404)
403 1orr_A CDP-tyvelose-2-epimeras 67.1 4.8 0.00017 37.1 4.3 31 3-33 2-33 (347)
404 4dup_A Quinone oxidoreductase; 66.7 4.9 0.00017 38.1 4.4 39 4-45 170-209 (353)
405 2ph5_A Homospermidine synthase 66.3 4.1 0.00014 41.3 3.9 92 2-122 13-114 (480)
406 1y7t_A Malate dehydrogenase; N 66.2 4.6 0.00016 38.0 4.1 31 2-32 4-42 (327)
407 2eih_A Alcohol dehydrogenase; 66.1 9.9 0.00034 35.7 6.4 38 4-44 169-207 (343)
408 1dlj_A UDP-glucose dehydrogena 66.1 4.7 0.00016 39.4 4.2 38 3-44 1-38 (402)
409 2r85_A PURP protein PF1517; AT 66.1 5.5 0.00019 36.7 4.5 32 1-33 1-32 (334)
410 1x13_A NAD(P) transhydrogenase 65.8 5 0.00017 39.4 4.3 30 3-32 173-202 (401)
411 2b69_A UDP-glucuronate decarbo 65.8 5.7 0.00019 36.9 4.6 31 3-33 28-59 (343)
412 1kol_A Formaldehyde dehydrogen 65.7 11 0.00039 36.1 6.8 39 4-45 188-227 (398)
413 2p5y_A UDP-glucose 4-epimerase 65.3 5.9 0.0002 36.1 4.5 31 3-33 1-32 (311)
414 2vn8_A Reticulon-4-interacting 65.0 4.6 0.00016 38.5 3.9 29 4-32 186-215 (375)
415 3gqv_A Enoyl reductase; medium 64.9 11 0.00036 36.0 6.4 29 4-32 167-196 (371)
416 2ewd_A Lactate dehydrogenase,; 64.6 5 0.00017 37.7 4.0 32 2-34 4-36 (317)
417 4hb9_A Similarities with proba 64.5 5.9 0.0002 37.1 4.5 31 2-32 1-31 (412)
418 4egb_A DTDP-glucose 4,6-dehydr 64.4 4.1 0.00014 37.7 3.3 32 3-34 25-59 (346)
419 3pid_A UDP-glucose 6-dehydroge 64.4 5.7 0.0002 39.6 4.5 39 3-45 37-75 (432)
420 1n2s_A DTDP-4-, DTDP-glucose o 64.3 4.9 0.00017 36.3 3.7 30 3-33 1-31 (299)
421 1sb8_A WBPP; epimerase, 4-epim 64.2 6.3 0.00021 36.7 4.6 31 3-33 28-59 (352)
422 1x0v_A GPD-C, GPDH-C, glycerol 64.1 3.4 0.00011 39.0 2.6 32 2-33 8-46 (354)
423 3tqh_A Quinone oxidoreductase; 63.9 2.6 8.8E-05 39.4 1.8 29 4-32 155-184 (321)
424 1l7d_A Nicotinamide nucleotide 63.9 5.8 0.0002 38.5 4.3 30 3-32 173-202 (384)
425 1oc2_A DTDP-glucose 4,6-dehydr 63.8 4.8 0.00016 37.2 3.6 31 3-33 5-38 (348)
426 2bll_A Protein YFBG; decarboxy 63.8 6.4 0.00022 36.2 4.5 32 3-34 1-34 (345)
427 2hk9_A Shikimate dehydrogenase 63.7 5 0.00017 36.9 3.7 31 3-33 130-160 (275)
428 3enk_A UDP-glucose 4-epimerase 63.7 6.6 0.00023 36.1 4.6 32 2-33 5-37 (341)
429 2z1m_A GDP-D-mannose dehydrata 63.5 6.3 0.00021 36.2 4.3 31 3-33 4-35 (345)
430 2h6e_A ADH-4, D-arabinose 1-de 63.4 1.6 5.6E-05 41.2 0.3 39 4-45 173-213 (344)
431 4gx0_A TRKA domain protein; me 63.3 6 0.00021 40.0 4.5 31 3-33 349-379 (565)
432 3p2y_A Alanine dehydrogenase/p 63.2 4.8 0.00017 39.5 3.6 39 3-44 185-223 (381)
433 2i99_A MU-crystallin homolog; 63.1 9.8 0.00033 35.7 5.7 40 3-44 136-176 (312)
434 3ehe_A UDP-glucose 4-epimerase 63.0 5.9 0.0002 36.1 4.1 30 3-33 2-32 (313)
435 2eez_A Alanine dehydrogenase; 62.8 6.4 0.00022 37.8 4.4 38 3-43 167-204 (369)
436 2hun_A 336AA long hypothetical 62.6 5.7 0.0002 36.5 3.9 31 3-33 4-37 (336)
437 2q1w_A Putative nucleotide sug 62.6 6.8 0.00023 36.3 4.5 31 3-33 22-53 (333)
438 1wly_A CAAR, 2-haloacrylate re 62.4 8.9 0.00031 35.7 5.3 30 4-33 148-178 (333)
439 1tt7_A YHFP; alcohol dehydroge 62.3 8.2 0.00028 35.9 5.0 31 4-34 153-184 (330)
440 3au8_A 1-deoxy-D-xylulose 5-ph 62.2 9.1 0.00031 38.6 5.4 42 3-45 78-125 (488)
441 1h2b_A Alcohol dehydrogenase; 61.9 14 0.00049 34.8 6.7 39 4-45 189-228 (359)
442 3h5n_A MCCB protein; ubiquitin 61.9 4.2 0.00014 39.2 2.9 25 3-27 119-143 (353)
443 3h8v_A Ubiquitin-like modifier 61.6 3.9 0.00013 38.7 2.5 24 3-26 37-60 (292)
444 2j8z_A Quinone oxidoreductase; 61.1 11 0.00038 35.6 5.7 38 4-44 165-203 (354)
445 3orq_A N5-carboxyaminoimidazol 60.9 8 0.00027 37.1 4.7 31 3-33 13-43 (377)
446 3d7l_A LIN1944 protein; APC893 60.9 8.6 0.0003 32.6 4.5 30 3-33 4-34 (202)
447 3iup_A Putative NADPH:quinone 60.8 11 0.00037 36.1 5.7 39 4-45 173-213 (379)
448 1udb_A Epimerase, UDP-galactos 60.6 7.5 0.00026 35.8 4.3 30 3-32 1-31 (338)
449 1a5z_A L-lactate dehydrogenase 60.5 6 0.00021 37.3 3.7 29 3-31 1-31 (319)
450 4eye_A Probable oxidoreductase 60.0 7.4 0.00025 36.6 4.3 30 4-33 162-192 (342)
451 4dio_A NAD(P) transhydrogenase 59.8 7.5 0.00026 38.5 4.3 31 3-34 191-221 (405)
452 1iow_A DD-ligase, DDLB, D-ALA\ 59.6 8.5 0.00029 34.9 4.5 33 1-33 1-42 (306)
453 4gx0_A TRKA domain protein; me 59.5 12 0.00041 37.8 6.0 40 2-44 127-166 (565)
454 2pk3_A GDP-6-deoxy-D-LYXO-4-he 59.3 8.6 0.00029 35.0 4.5 31 3-33 13-44 (321)
455 2pzm_A Putative nucleotide sug 59.2 8.3 0.00028 35.6 4.4 31 3-33 21-52 (330)
456 1i24_A Sulfolipid biosynthesis 59.1 8 0.00027 36.5 4.3 31 3-33 12-43 (404)
457 2c2x_A Methylenetetrahydrofola 59.1 28 0.00096 32.7 8.0 43 89-139 203-249 (281)
458 2c0c_A Zinc binding alcohol de 59.0 8.1 0.00028 36.7 4.3 38 4-44 166-204 (362)
459 1hyh_A L-hicdh, L-2-hydroxyiso 58.9 6.8 0.00023 36.5 3.7 30 3-32 2-33 (309)
460 1smk_A Malate dehydrogenase, g 58.9 6.3 0.00022 37.4 3.5 31 2-32 8-41 (326)
461 1r6d_A TDP-glucose-4,6-dehydra 58.7 8.7 0.0003 35.3 4.4 31 3-33 1-38 (337)
462 1qor_A Quinone oxidoreductase; 58.7 9.2 0.00031 35.5 4.6 38 4-44 143-181 (327)
463 4b8w_A GDP-L-fucose synthase; 58.2 7.1 0.00024 35.0 3.6 24 2-25 6-30 (319)
464 1eq2_A ADP-L-glycero-D-mannohe 58.0 10 0.00034 34.2 4.6 31 4-34 1-33 (310)
465 1yvv_A Amine oxidase, flavin-c 57.9 9.3 0.00032 34.9 4.4 33 1-33 1-33 (336)
466 3gms_A Putative NADPH:quinone 57.3 6.2 0.00021 37.1 3.2 30 4-33 147-177 (340)
467 2q1s_A Putative nucleotide sug 57.3 9.2 0.00031 36.1 4.4 31 3-33 33-65 (377)
468 1rkx_A CDP-glucose-4,6-dehydra 56.9 9.8 0.00033 35.4 4.5 31 3-33 10-41 (357)
469 3ngx_A Bifunctional protein fo 56.7 33 0.0011 32.1 8.0 86 3-139 151-240 (276)
470 4a7p_A UDP-glucose dehydrogena 56.6 9.5 0.00032 38.0 4.5 40 2-44 8-47 (446)
471 3vtf_A UDP-glucose 6-dehydroge 56.6 12 0.00042 37.4 5.3 40 3-45 22-61 (444)
472 3fbs_A Oxidoreductase; structu 56.1 12 0.0004 33.3 4.7 32 1-32 1-32 (297)
473 3sxp_A ADP-L-glycero-D-mannohe 55.9 10 0.00036 35.4 4.5 31 3-33 11-44 (362)
474 3pi7_A NADH oxidoreductase; gr 55.9 11 0.00037 35.5 4.6 30 4-33 167-197 (349)
475 3tl2_A Malate dehydrogenase; c 55.2 11 0.00039 35.6 4.7 29 3-31 9-38 (315)
476 1y8q_B Anthracycline-, ubiquit 54.6 6.6 0.00023 41.2 3.1 103 3-107 18-126 (640)
477 1db3_A GDP-mannose 4,6-dehydra 54.5 11 0.00038 35.0 4.5 31 3-33 2-33 (372)
478 1kew_A RMLB;, DTDP-D-glucose 4 54.5 8.6 0.00029 35.7 3.6 31 3-33 1-33 (361)
479 3pqe_A L-LDH, L-lactate dehydr 54.4 9.1 0.00031 36.6 3.8 32 2-34 5-38 (326)
480 2x6t_A ADP-L-glycero-D-manno-h 54.2 12 0.0004 34.9 4.5 32 3-34 47-80 (357)
481 2pbz_A Hypothetical protein; N 53.5 11 0.00038 35.9 4.2 33 1-34 1-33 (320)
482 1gy8_A UDP-galactose 4-epimera 53.5 11 0.00039 35.4 4.4 31 3-33 3-35 (397)
483 2p4h_X Vestitone reductase; NA 53.4 12 0.0004 34.1 4.3 30 3-32 2-32 (322)
484 2ggs_A 273AA long hypothetical 53.3 12 0.00042 33.0 4.3 29 4-33 2-31 (273)
485 2v6g_A Progesterone 5-beta-red 53.1 8.5 0.00029 35.7 3.3 31 3-33 2-38 (364)
486 2csu_A 457AA long hypothetical 53.1 41 0.0014 33.4 8.5 81 3-119 9-94 (457)
487 3l07_A Bifunctional protein fo 52.8 40 0.0014 31.7 7.9 85 4-139 163-251 (285)
488 1pzg_A LDH, lactate dehydrogen 52.6 11 0.00037 35.9 4.0 32 2-34 9-41 (331)
489 1omo_A Alanine dehydrogenase; 51.9 18 0.00063 34.1 5.5 40 3-44 126-166 (322)
490 1uay_A Type II 3-hydroxyacyl-C 50.9 12 0.00042 32.4 3.9 33 1-33 1-34 (242)
491 1lnq_A MTHK channels, potassiu 50.7 7.8 0.00027 36.3 2.7 35 4-42 117-151 (336)
492 2dwc_A PH0318, 433AA long hypo 50.4 15 0.00051 35.6 4.7 32 2-33 19-50 (433)
493 1a4i_A Methylenetetrahydrofola 50.1 53 0.0018 31.1 8.3 26 3-28 166-192 (301)
494 1oju_A MDH, malate dehydrogena 49.6 12 0.0004 35.2 3.7 35 3-40 1-37 (294)
495 3ax6_A Phosphoribosylaminoimid 49.5 16 0.00054 34.6 4.7 31 3-33 2-32 (380)
496 1pjc_A Protein (L-alanine dehy 49.4 15 0.0005 35.2 4.4 39 3-44 168-206 (361)
497 1kjq_A GART 2, phosphoribosylg 48.9 17 0.0006 34.3 4.9 32 2-33 11-42 (391)
498 2dkn_A 3-alpha-hydroxysteroid 48.9 17 0.00058 31.6 4.5 30 4-33 3-33 (255)
499 3fr7_A Putative ketol-acid red 48.5 12 0.00043 38.1 3.9 28 3-30 55-88 (525)
500 3hn7_A UDP-N-acetylmuramate-L- 48.3 50 0.0017 33.2 8.4 90 3-121 20-110 (524)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=3.6e-125 Score=918.50 Aligned_cols=329 Identities=64% Similarity=1.030 Sum_probs=324.6
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
+||||||||||||+++|+++++ +++||||||+++|+++++|||||||+||+|+++++.++++|.|||++|+++++++|+
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~dp~ 81 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERDPA 81 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeecccc
Confidence 7999999999999999999998 999999999988999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCCCCeEEcccCccccCCCCCeEecCCchhhhHHhHHHH
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAKV 161 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d~p~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~lk~ 161 (364)
+++|++.|+||||||||.|+++|+|+.|+++||||||||+|++|+||||||||++.|+++++||||||||||||+|++|+
T Consensus 82 ~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~lkv 161 (332)
T 3pym_A 82 NLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKV 161 (332)
T ss_dssp GSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHHHH
T ss_pred cCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred HhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceeccceEE
Q psy8544 162 IHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSVV 241 (364)
Q Consensus 162 L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~gs~~ 241 (364)
|||+|||++++||||||+|++|+++|+|+++|||++|++++||||++||++|+++||||+|+||++|||+||||+++|++
T Consensus 162 L~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~ 241 (332)
T 3pym_A 162 INDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVV 241 (332)
T ss_dssp HHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSCEEE
T ss_pred HHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCcEee
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCcchhh
Q psy8544 242 DLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYGYSCR 321 (364)
Q Consensus 242 dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~gys~r 321 (364)
||+++|+|++++|||+++|++|+||+|||||+|+|+|+||+||+||+||||||+.+|++++++|+||++|||||||||||
T Consensus 242 dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~r 321 (332)
T 3pym_A 242 DLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYGYSTR 321 (332)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECTTHHHHHH
T ss_pred EEEEEECCcCCHHHHHHHHHHhccCccCceeEEEcCCeEeeccCCCCcceEEccccccccCCCEEEEEEEECCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhc
Q psy8544 322 VLDLIQYMKS 331 (364)
Q Consensus 322 ~~dl~~~~~~ 331 (364)
|+||+.||.+
T Consensus 322 ~~dl~~~~~~ 331 (332)
T 3pym_A 322 VVDLVEHVAK 331 (332)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999975
No 2
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=7.7e-125 Score=917.74 Aligned_cols=333 Identities=65% Similarity=1.068 Sum_probs=326.1
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCc-ceeecCC-eEEECCEEEEEEec
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKG-DVKTEGN-NIVVNGKKIAVFQK 77 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~-~v~~~~~-~l~i~gk~I~v~~~ 77 (364)
.++||||||||||||+++|+++++ +++||||||+++|+++++|||||||+||+|++ +++.+++ +|.|||++|+++++
T Consensus 2 ~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e 81 (337)
T 3v1y_O 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC
T ss_pred CceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEe
Confidence 048999999999999999999998 89999999998899999999999999999999 9999988 99999999999999
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCCCCeEEcccCccccCCCCCeEecCCchhhhHHh
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAP 157 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d~p~vV~gVN~~~~~~~~~IISnaSCTTn~Lap 157 (364)
++|++++|++.|+||||||||.|+++|+|+.|+++||||||||+|++|+||||||||++.|+++++||||||||||||+|
T Consensus 82 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap 161 (337)
T 3v1y_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAP 161 (337)
T ss_dssp SSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred cCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred HHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceecc
Q psy8544 158 LAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237 (364)
Q Consensus 158 ~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~ 237 (364)
++|+|||+|||++++||||||+|++|+++|+++++|||++|++++||||++||++|+++||||+|+||++|||+||||++
T Consensus 162 ~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 241 (337)
T 3v1y_O 162 LAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVD 241 (337)
T ss_dssp HHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSCSS
T ss_pred HHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCCCC
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCc
Q psy8544 238 VSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYG 317 (364)
Q Consensus 238 gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~g 317 (364)
+|++||+++|+|++++|||+++|++|+||+|||||+|+|+|+||+||+|++||||||+.+|++++++|+||++|||||||
T Consensus 242 ~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~g 321 (337)
T 3v1y_O 242 VSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWG 321 (337)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHHTTTBTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHH
T ss_pred cEEEEEEEEECCCCcHHHHHHHHHHhccCccCCeeEEEcCCEEeeccCCCCcceEEecccCeEECCCEEEEEEEECCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhHHHHHHhccC
Q psy8544 318 YSCRVLDLIQYMKSKD 333 (364)
Q Consensus 318 ys~r~~dl~~~~~~~~ 333 (364)
|||||+||+.||++++
T Consensus 322 ys~r~~dl~~~~~~~~ 337 (337)
T 3v1y_O 322 YSNRVIDLIRHMAKTQ 337 (337)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHhccC
Confidence 9999999999998763
No 3
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=7e-124 Score=913.79 Aligned_cols=332 Identities=65% Similarity=1.086 Sum_probs=326.7
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
++||||||||||||+++|++++++++||||||+++|+++++|||||||+||+|+++++.++++|.|||++|+|+++++|+
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~dp~ 86 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCKEPK 86 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eeEEEEECCChHHHHHHHHHHhCCCEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecCChh
Confidence 48999999999999999999988899999999989999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCCCCeEEcccCccccCC-CCCeEecCCchhhhHHhHHH
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKDAPMFVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAK 160 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d~p~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap~lk 160 (364)
+++|+++|+||||||||.|+++|+|+.|+++||||||||+||+|+||||||||++.|++ +++||||||||||||+|++|
T Consensus 87 ~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap~lk 166 (346)
T 3h9e_O 87 QIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAK 166 (346)
T ss_dssp GCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHHHHH
T ss_pred hCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997 78999999999999999999
Q ss_pred HHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceeccceE
Q psy8544 161 VIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSV 240 (364)
Q Consensus 161 ~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~gs~ 240 (364)
+|||+|||++++||||||+|++|+++|+|+++|||++|++++||||++||++++++||+|+|+||++|||+||||+++|+
T Consensus 167 vL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~~s~ 246 (346)
T 3h9e_O 167 VIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSV 246 (346)
T ss_dssp HHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSSCEE
T ss_pred HHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEccccccee
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCcchh
Q psy8544 241 VDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYGYSC 320 (364)
Q Consensus 241 ~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~gys~ 320 (364)
+||+|+|+|++++|||+++|++|+||+|||||+|+|+|+||+||+||+||||||+.+|++++++|+||++||||||||||
T Consensus 247 ~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~ 326 (346)
T 3h9e_O 247 VDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSH 326 (346)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHH
T ss_pred EEEEEEECCcCCHHHHHHHHHHhccCccCCceeEEcCCeEeeccCCCCCceeEcccccEEecCCEEEEEEEECCCcchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHhccC
Q psy8544 321 RVLDLIQYMKSKD 333 (364)
Q Consensus 321 r~~dl~~~~~~~~ 333 (364)
||+||+.||++++
T Consensus 327 r~~dl~~~~~~~~ 339 (346)
T 3h9e_O 327 RVVDLLRYMFSRD 339 (346)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh
Confidence 9999999999865
No 4
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=7.9e-124 Score=911.41 Aligned_cols=330 Identities=47% Similarity=0.810 Sum_probs=311.4
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||||||||||+++|+++++ +++||||||+ +|+++++|||||||+||+|+++++.++++|.|||++|+++++++|
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNRDP 82 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSCG
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEeecCCh
Confidence 58999999999999999999998 9999999998 699999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-CCCeEEcccCccccCC-CCCeEecCCchhhhHHhH
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-DAPMFVCGVNLDKYDP-SHSVVSNASCTTNCLAPL 158 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-d~p~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap~ 158 (364)
++++|++.|+||||||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|++ +++||||||||||||+|+
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~Lap~ 162 (345)
T 4dib_A 83 KELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAPV 162 (345)
T ss_dssp GGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHHHH
T ss_pred hhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhHHH
Confidence 99999999999999999999999999999999999999999998 5899999999999997 689999999999999999
Q ss_pred HHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceeccc
Q psy8544 159 AKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238 (364)
Q Consensus 159 lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~g 238 (364)
+|+|||+|||++++||||||+|++|+++|+|+ +|||++|++++||||++||++|+++||||+|+||++|||+||||+++
T Consensus 163 lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~ 241 (345)
T 4dib_A 163 VKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNV 241 (345)
T ss_dssp HHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCSSE
T ss_pred HHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCccc
Confidence 99999999999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCcc
Q psy8544 239 SVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYGY 318 (364)
Q Consensus 239 s~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~gy 318 (364)
|++||+++|+|++++|||+++|++|+||+|||||+|+|+|+||+||+|++||||||+.+|++++++|+||++||||||||
T Consensus 242 s~~dlt~~lek~~t~eei~~~lk~As~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~Gy 321 (345)
T 4dib_A 242 SLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNEWGY 321 (345)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEETTHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHhhcCcccceeeeEcCcEeeeecCCCCcchhhhhhccEEECCCEEEEEEEECCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHhccC
Q psy8544 319 SCRVLDLIQYMKSKD 333 (364)
Q Consensus 319 s~r~~dl~~~~~~~~ 333 (364)
||||+||+.||.+++
T Consensus 322 s~r~~dl~~~~~~~~ 336 (345)
T 4dib_A 322 SRRVVDLVTLVVDEL 336 (345)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999999864
No 5
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=1.1e-123 Score=909.00 Aligned_cols=329 Identities=45% Similarity=0.749 Sum_probs=323.2
Q ss_pred CCceEEEEccChHHHHHHHHHhcC---CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR---NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~---~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
|++||||||||||||+++|+++++ +++||||||+ +|+++++|||||||+||+|+++++.++++|.|||++|+++++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSEEEEECC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEEEEEEee
Confidence 889999999999999999999886 7999999998 799999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC-CCeEEcccCccccCCCCCeEecCCchhhhHH
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLA 156 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d-~p~vV~gVN~~~~~~~~~IISnaSCTTn~La 156 (364)
++|++++|++.|+||||||||.|+++|+|+.|+++||||||||+|++| +||||||||++.|+++++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~La 159 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLA 159 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhhH
Confidence 999999999999999999999999999999999999999999999987 7999999999999988899999999999999
Q ss_pred hHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceec
Q psy8544 157 PLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVP 236 (364)
Q Consensus 157 p~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~ 236 (364)
|++|+|||+|||++++||||||+|++|+++|+|+ +|||++|++++||||++||++|+++||||||+||++|||+||||+
T Consensus 160 p~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~-kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 238 (335)
T 3doc_A 160 PVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMH-KDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTP 238 (335)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESCS
T ss_pred HhHHHHHHHcCEEEEEEEeeeeccchhhhhcCcc-ccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEeccc
Confidence 9999999999999999999999999999999986 899999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCC
Q psy8544 237 NVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEY 316 (364)
Q Consensus 237 ~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~ 316 (364)
++|++||+++|+|++++|||+++|++|+||+|||||+|+|+|+||+||+||+||||||+.+|++++++|+||++||||||
T Consensus 239 ~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~ 318 (335)
T 3doc_A 239 NVSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTDEKLVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDNEW 318 (335)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECTTH
T ss_pred cccceEEEEEECCCCCHHHHHHHHHHhhcCCcCCeeEEEcCCeEeeeeCCCCCccccCchhhEEEcCCEEEEEEEEcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHhc
Q psy8544 317 GYSCRVLDLIQYMKS 331 (364)
Q Consensus 317 gys~r~~dl~~~~~~ 331 (364)
||||||+||+.||++
T Consensus 319 gys~r~~dl~~~~~~ 333 (335)
T 3doc_A 319 GFSSRMSDTAVALGK 333 (335)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHh
Confidence 999999999999975
No 6
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=3.9e-124 Score=917.77 Aligned_cols=334 Identities=53% Similarity=0.911 Sum_probs=326.2
Q ss_pred CCceEEEEccChHHHHHHHH----HhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceee--------cCCeEEE
Q psy8544 1 MAYKIGINGFGRIGRLVLRE----ALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKT--------EGNNIVV 67 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~----l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~--------~~~~l~i 67 (364)
|++||||||||||||+++|+ ++++ +++||||||+++|+++++|||||||+||+|+++++. ++++|.|
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 88999999999999999999 6777 899999999778999999999999999999999999 8999999
Q ss_pred CCEEEEEEe-cCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-CCCeEEcccCccccCC-CCCe
Q psy8544 68 NGKKIAVFQ-KMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-DAPMFVCGVNLDKYDP-SHSV 144 (364)
Q Consensus 68 ~gk~I~v~~-~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-d~p~vV~gVN~~~~~~-~~~I 144 (364)
||++|++++ +++|++++|++.|+||||||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|++ +++|
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~I 160 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHV 160 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCSE
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCCE
Confidence 999999998 899999999999999999999999999999999999999999999998 7999999999999998 7899
Q ss_pred EecCCchhhhHHhHHHHH-hhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCC
Q psy8544 145 VSNASCTTNCLAPLAKVI-HDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLE 223 (364)
Q Consensus 145 ISnaSCTTn~Lap~lk~L-~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~ 223 (364)
|||||||||||+|++|+| ||+|||++++||||||+|++|+++|+|+++|||++|++++||||++||++|+++||||||+
T Consensus 161 ISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~ 240 (359)
T 3ids_C 161 VSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQ 240 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGGT
T ss_pred EECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhhc
Confidence 999999999999999999 9999999999999999999999999998789999999999999999999999999999999
Q ss_pred CceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceec-
Q psy8544 224 GKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALN- 302 (364)
Q Consensus 224 gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~- 302 (364)
||++||||||||+++|++||+++|+|++++|||+++|++|++|+|||||+|+|+|+||+||+|++||||||+.+|++++
T Consensus 241 gkltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~ 320 (359)
T 3ids_C 241 GKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSADFINDNRSSIYDSKATLQNNL 320 (359)
T ss_dssp TSEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEHHHHHHSSC
T ss_pred CceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHHHHHhccCccCCceeEecCCEEeeecCCCCcceeEecccceeecc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---CceEEEEEEecCCCcchhhhhHHHHHHhccCC
Q psy8544 303 ---KNFVKLVTWYDNEYGYSCRVLDLIQYMKSKDT 334 (364)
Q Consensus 303 ---~~~~kl~~WyDNE~gys~r~~dl~~~~~~~~~ 334 (364)
++|+||++||||||||||||+||+.||++++.
T Consensus 321 ~~~~~~vk~~~WYDNE~Gys~r~vdl~~~~~~~~~ 355 (359)
T 3ids_C 321 PKERRFFKIVSWYDNEWGYSHRVVDLVRHMASKDR 355 (359)
T ss_dssp TTCSSEEEEEEEECTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeEEECCCcchHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999998754
No 7
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=1.5e-121 Score=894.13 Aligned_cols=327 Identities=46% Similarity=0.747 Sum_probs=320.1
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
|++||||||||||||+++|+++++ +++||||||+ +|+++++|||||||+||+|+++++.++++|.|||++|+++++++
T Consensus 3 m~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~-~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~d 81 (338)
T 3lvf_P 3 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPD 81 (338)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS-SCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSC
T ss_pred ccEEEEEECCCcHHHHHHHHHHHCCCceEEEEecC-CCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEecc
Confidence 789999999999999999999998 8999999995 89999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-CCCeEEcccCccccCCCCCeEecCCchhhhHHhH
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPL 158 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-d~p~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~ 158 (364)
|++++|++.|+||||||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|+++++||||||||||||+|+
T Consensus 82 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap~ 161 (338)
T 3lvf_P 82 ASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPV 161 (338)
T ss_dssp GGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHHHH
T ss_pred cccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhHHH
Confidence 999999999999999999999999999999999999999999998 6999999999999998889999999999999999
Q ss_pred HHHHhhhcCeeEEEEEeeeccccchhhhcCCCcc-cccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceecc
Q psy8544 159 AKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKK-MWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237 (364)
Q Consensus 159 lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~-d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~ 237 (364)
+|+|||+|||++++||||||+|++|+++|+|+.+ |||++|++++||||++||++|+++||||||+||++|||+||||++
T Consensus 162 lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 241 (338)
T 3lvf_P 162 AKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVAT 241 (338)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCCCc
Confidence 9999999999999999999999999999999866 999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEecc-CCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceec---CceEEEEEEec
Q psy8544 238 VSVVDLTVRLCC-DVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALN---KNFVKLVTWYD 313 (364)
Q Consensus 238 gs~~dl~~~l~k-~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~---~~~~kl~~WyD 313 (364)
+|++||+++|+| ++++|||+++|++|+||+ |+|+|+|+||+||+|++||||||+.+|++++ ++|+||++|||
T Consensus 242 ~s~~dlt~~lek~~~t~eei~~~lk~As~g~----l~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~vk~~~WYD 317 (338)
T 3lvf_P 242 GSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYD 317 (338)
T ss_dssp CEEEEEEEEESSSSCCHHHHHHHHHHTCCSS----EEEECSCCCGGGGTTCCCSEEEEGGGCEEEEETTEEEEEEEEEEC
T ss_pred eEEEEEEEEEccCCCCHHHHHHHHHHhhcCC----cccccCCEEeEeeCCCCcceEEecccceEecCCCCCEEEEEEEEC
Confidence 999999999999 999999999999999987 9999999999999999999999999999999 99999999999
Q ss_pred CCCcchhhhhHHHHHHhcc
Q psy8544 314 NEYGYSCRVLDLIQYMKSK 332 (364)
Q Consensus 314 NE~gys~r~~dl~~~~~~~ 332 (364)
|||||||||+||+.||.++
T Consensus 318 NE~gys~r~~dl~~~~~~~ 336 (338)
T 3lvf_P 318 NEMSYTAQLVRTLAYLAEL 336 (338)
T ss_dssp TTHHHHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhh
Confidence 9999999999999999874
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=3.2e-121 Score=896.31 Aligned_cols=329 Identities=50% Similarity=0.803 Sum_probs=321.0
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
|++||||||||||||+++|+|++++||||||||+ .|+++++|||||||+||+|++++++++++|.|||++|+++++++|
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~~~~ivaIndl-~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~~~dp 98 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFERGIDIVAINDL-TDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDP 98 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CCeEEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEEEEEcCCh
Confidence 4689999999999999999999999999999998 699999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCccEEEeecCCCCC----HhhHHHHHh-CCCCEEEEeCCCCC-CCeEEcccCccccCCCCCeEecCCchhhh
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKT----KDTASAHLK-GGAKKVIITAPSKD-APMFVCGVNLDKYDPSHSVVSNASCTTNC 154 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s----~e~a~~hl~-aGakkVIIsaps~d-~p~vV~gVN~~~~~~~~~IISnaSCTTn~ 154 (364)
++++|++.|+||||||||.|++ +|+|+.|++ +||||||||+|++| +||||||||++.|+++++|||||||||||
T Consensus 99 ~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCTTn~ 178 (356)
T 3hja_A 99 KNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNC 178 (356)
T ss_dssp GGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred hhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccchhh
Confidence 9999999999999999999999 999999999 99999999999986 69999999999999878999999999999
Q ss_pred HHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEece
Q psy8544 155 LAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVP 234 (364)
Q Consensus 155 Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVP 234 (364)
|+|++|+|||+|||++++||||||+|++|+++|+|+ +||||+|++++||||++||++|+++||||+|+||++|||+|||
T Consensus 179 Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVP 257 (356)
T 3hja_A 179 LAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVP 257 (356)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEEEES
T ss_pred hhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEEEcC
Confidence 999999999999999999999999999999999998 8999999999999999999999999999999999999999999
Q ss_pred eccceEEEEEEEe-ccCCCHHHHHHHHHHccCCC-CCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEe
Q psy8544 235 VPNVSVVDLTVRL-CCDVTYDEIKAKVKAASQGP-MKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWY 312 (364)
Q Consensus 235 v~~gs~~dl~~~l-~k~~s~eei~~~l~~a~~~~-lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~Wy 312 (364)
|+++|++||+++| +|++++|||+++|++|+||+ |||||+|+|+|+||+||+||+||||||+.+|++++++|+||++||
T Consensus 258 v~~~s~~dlt~~l~ek~~t~eeI~~~lk~Aa~g~~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WY 337 (356)
T 3hja_A 258 VPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWY 337 (356)
T ss_dssp CSSCEEEEEEEEESCTTCCHHHHHHHHHHHHHSTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEECSTTEEEEEEEE
T ss_pred CCccEeEEEEEEEccCCCCHHHHHHHHHHHhcCchhccccceecCCeEeeeccCCCCceEEcCcCCEEEcCCEEEEEEEE
Confidence 9999999999999 99999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred cCCCcchhhhhHHHHHHhc
Q psy8544 313 DNEYGYSCRVLDLIQYMKS 331 (364)
Q Consensus 313 DNE~gys~r~~dl~~~~~~ 331 (364)
||||||||||+||+.||++
T Consensus 338 DNE~Gys~r~vdl~~~~~~ 356 (356)
T 3hja_A 338 DNEFGYSTRVVDLAQKLVK 356 (356)
T ss_dssp CTTHHHHHHHHHHHHHHC-
T ss_pred CCccchHHHHHHHHHHHhC
Confidence 9999999999999999963
No 9
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=1.3e-118 Score=878.36 Aligned_cols=330 Identities=60% Similarity=0.976 Sum_probs=321.8
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
.+||||||||||||+++|+++++ +||||+|||+++++++++|||||||+||+|++++++++++|.++|++|+++++++|
T Consensus 11 ~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~dp 90 (345)
T 2b4r_O 11 ATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP 90 (345)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG
T ss_pred heEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCCc
Confidence 47999999999999999999998 99999999966899999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC-CCeEEcccCccccCCCCCeEecCCchhhhHHhHH
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLA 159 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d-~p~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~l 159 (364)
++++|++.|+||||||||.|+++|+|+.|+++||||||||+|+++ +||||||||++.|++.++||||||||||||+|++
T Consensus 91 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~Lap~l 170 (345)
T 2b4r_O 91 SQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLA 170 (345)
T ss_dssp GGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHH
T ss_pred ccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999986 8999999999999977789999999999999999
Q ss_pred HHHhhhcCeeEEEEEeeeccccchhhhcCCC--cccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceecc
Q psy8544 160 KVIHDNFEILEGLMTTVHAVTATQKTVDAPS--KKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237 (364)
Q Consensus 160 k~L~d~fGI~~~~~TTvha~t~~q~~~D~~~--~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~ 237 (364)
|+|||+|||++++||||||+|++|+++|+|+ ++|||++|++++||||++||++|+++||||+|+||++|||+||||++
T Consensus 171 k~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~ 250 (345)
T 2b4r_O 171 KVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGT 250 (345)
T ss_dssp HHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEECSCSS
T ss_pred HHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEecccc
Confidence 9999999999999999999999999999997 38999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCc
Q psy8544 238 VSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYG 317 (364)
Q Consensus 238 gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~g 317 (364)
||++||+++|+|++++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++++++|+||++|||||||
T Consensus 251 gs~~dltv~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~~VS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~WyDNE~g 330 (345)
T 2b4r_O 251 VSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWG 330 (345)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEEEEEEEEETTEEEEEEEECTTHH
T ss_pred eEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCcccccCCCceEEeeCCCCcccccccccCeEecCCEEEEEEEeCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhHHHHHHhc
Q psy8544 318 YSCRVLDLIQYMKS 331 (364)
Q Consensus 318 ys~r~~dl~~~~~~ 331 (364)
|||||+||+.||.+
T Consensus 331 ys~r~~dl~~~~~~ 344 (345)
T 2b4r_O 331 YSNRVLDLAVHITT 344 (345)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred hHhHHHHHHHHHhc
Confidence 99999999999964
No 10
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=3.7e-118 Score=873.33 Aligned_cols=327 Identities=45% Similarity=0.721 Sum_probs=319.7
Q ss_pred ceEEEEccChHHHHHHHHHhcC----CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR----NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~----~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
+||||||||||||+++|+|+++ +||||+|||+ +|+++++|||+|||+||+|++++++++++|.++|++|++++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEcC
Confidence 7999999999999999999987 8999999996 7999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-CCC-eEEcccCccccCCCCCeEecCCchhhhHH
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-DAP-MFVCGVNLDKYDPSHSVVSNASCTTNCLA 156 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-d~p-~vV~gVN~~~~~~~~~IISnaSCTTn~La 156 (364)
+|++++|++.|+||||||||.|+++|+|+.|+++||||||||+|++ |+| |||||||++.|++.++||||||||||||+
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~La 160 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNCLA 160 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHHHH
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 799 99999999999977789999999999999
Q ss_pred hHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceec
Q psy8544 157 PLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVP 236 (364)
Q Consensus 157 p~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~ 236 (364)
|++|+|||+|||++++||||||+|++|+++|+|+ +|||++|++++||||++||++|+++||||+|+||++|||+||||+
T Consensus 161 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~ 239 (335)
T 1obf_O 161 PLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYH-EDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPTI 239 (335)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEESCS
T ss_pred HHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccc-cccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEeecc
Confidence 9999999999999999999999999999999996 899999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCC
Q psy8544 237 NVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEY 316 (364)
Q Consensus 237 ~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~ 316 (364)
+||++||+++|+|++++|||+++|++|++|+|||||+|+|+|+||+||+|++||||||+.+|++ +++|+||++||||||
T Consensus 240 ~~s~~dl~v~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~-~~~~vk~~~WyDNE~ 318 (335)
T 1obf_O 240 NVSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYNTEPLVSVDYNHDPASSTVDASLTKV-SGRLVKVSSWYDNEW 318 (335)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEE-ETTEEEEEEEECTTH
T ss_pred ceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCeecccCCceEeeeeCCCCccceeccccccc-cCCEEEEEEEeCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cchhhhhHHHHHHhcc
Q psy8544 317 GYSCRVLDLIQYMKSK 332 (364)
Q Consensus 317 gys~r~~dl~~~~~~~ 332 (364)
||||||+||+.||.++
T Consensus 319 gys~r~~dl~~~~~~~ 334 (335)
T 1obf_O 319 GFSNRMLDTTVALMSA 334 (335)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred chHhHHHHHHHHHhcc
Confidence 9999999999999764
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=3.9e-118 Score=874.77 Aligned_cols=329 Identities=50% Similarity=0.855 Sum_probs=320.3
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
|++||||||||||||+++|+|+++ +||||+|||+ +|+++++|||+|||+||+|++++++++++|.++|++|+++++++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~d 79 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKD 79 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCC
Confidence 778999999999999999999999 9999999996 79999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCCCC-eEEcccCccccCC-CCCeEecCCchhhhHHh
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKDAP-MFVCGVNLDKYDP-SHSVVSNASCTTNCLAP 157 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d~p-~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap 157 (364)
|++++|++.|+||||||||.|+++|+++.|+++||||||||+|++|+| |||||||++.|++ .++||||||||||||+|
T Consensus 80 p~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~Lap 159 (342)
T 2ep7_A 80 PSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAP 159 (342)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999997 67899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceecc
Q psy8544 158 LAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237 (364)
Q Consensus 158 ~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~ 237 (364)
++|+|||+|||++++||||||+|++|+++|+|+ +||||+|++++||||++||++|+++||||+|+||++|||+||||++
T Consensus 160 ~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~ 238 (342)
T 2ep7_A 160 CVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPH-KDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPD 238 (342)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHcCeeEEEEEEEeecccchhhhcCCc-chhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEecccc
Confidence 999999999999999999999999999999985 8999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEecc-CCCHHHHHHHHHHccCC-------CCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEE
Q psy8544 238 VSVVDLTVRLCC-DVTYDEIKAKVKAASQG-------PMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLV 309 (364)
Q Consensus 238 gs~~dl~~~l~k-~~s~eei~~~l~~a~~~-------~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~ 309 (364)
||++||+++|+| ++++|||+++|++|+|| +|||||+|+|+|+||+||+|++||||||+.+|+++ ++|+||+
T Consensus 239 ~s~~dltv~lek~~~t~eei~~~lk~a~~~~~~~~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~-~~~vk~~ 317 (342)
T 2ep7_A 239 GSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVI-DNLVHIA 317 (342)
T ss_dssp CEEEEEEEEESSCCSCHHHHHHHHHHHHHHHHTSCCGGGTTSEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEE
T ss_pred eEEEEEEEEEcCCCCCHHHHHHHHHHHhcCCcccccccccccccccCCCeEeeeECCCCccceecccccccc-CCEEEEE
Confidence 999999999999 99999999999999999 99999999999999999999999999999999999 8999999
Q ss_pred EEecCCCcchhhhhHHHHHHhcc
Q psy8544 310 TWYDNEYGYSCRVLDLIQYMKSK 332 (364)
Q Consensus 310 ~WyDNE~gys~r~~dl~~~~~~~ 332 (364)
+||||||||||||+||+.||.++
T Consensus 318 ~wyDNE~gys~r~~dl~~~~~~~ 340 (342)
T 2ep7_A 318 AWYDNEWGYSCRLRDLVIYLAER 340 (342)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHC
T ss_pred EEECCCccchhHHHHHHHHHHhc
Confidence 99999999999999999999765
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=1.5e-110 Score=820.78 Aligned_cols=327 Identities=50% Similarity=0.777 Sum_probs=318.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEE 82 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~ 82 (364)
+||||||||||||+++|+|++++||||+|||+ +|+++++|||+|||+||+|.++++++++.|.++|+.|+++++++|++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~evvaind~-~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~ 79 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCEEEEEecC-CCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChhh
Confidence 59999999999999999999889999999996 79999999999999999999999999999999999999998889999
Q ss_pred CCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC-CCeEEcccCccccCC-CCCeEecCCchhhhHHhHHH
Q psy8544 83 IPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD-APMFVCGVNLDKYDP-SHSVVSNASCTTNCLAPLAK 160 (364)
Q Consensus 83 ~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d-~p~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap~lk 160 (364)
++|++.++|+||||||.|+++|+++.|+++||||||||+|++| +|+||||||++.|++ +++||||||||||||+|++|
T Consensus 80 l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap~lk 159 (331)
T 2g82_O 80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMK 159 (331)
T ss_dssp SCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHHHHH
T ss_pred CcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987 799999999999996 47899999999999999999
Q ss_pred HHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceeccceE
Q psy8544 161 VIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSV 240 (364)
Q Consensus 161 ~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~gs~ 240 (364)
|||++|||++++||||||+||+|+++|+++ +|||++|++++||||++||++++++||+|+|+||+++||+||||++||+
T Consensus 160 ~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~gs~ 238 (331)
T 2g82_O 160 VLEEAFGVEKALMTTVHSYTNDQRLLDLPH-KDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGSI 238 (331)
T ss_dssp HHHHHTCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSSCEE
T ss_pred HHHHhcCccEEEEEEEeecccccchhcccc-ccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCCEEE
Confidence 999999999999999999999999999986 8999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCcchh
Q psy8544 241 VDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYGYSC 320 (364)
Q Consensus 241 ~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~gys~ 320 (364)
+|++++|+|++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|+++ ++|+|+++||||||||||
T Consensus 239 ~dl~v~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~-~~~~k~~~wydne~gys~ 317 (331)
T 2g82_O 239 SDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKAL-GNMVKVFAWYDNEWGYAN 317 (331)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHhhcCccCCccCCCCCCeeeeeeCCCCccceecchhcccc-CCEEEEEEEECCCchhHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred hhhHHHHHHhcc
Q psy8544 321 RVLDLIQYMKSK 332 (364)
Q Consensus 321 r~~dl~~~~~~~ 332 (364)
||+||+.||.++
T Consensus 318 r~~d~~~~~~~~ 329 (331)
T 2g82_O 318 RVADLVELVLRK 329 (331)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999999764
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=4.6e-109 Score=821.56 Aligned_cols=330 Identities=48% Similarity=0.770 Sum_probs=321.2
Q ss_pred CCceEEEEccChHHHHHHHHHhcC---CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR---NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~---~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
|++||||||||||||+++|+|+++ +||||+||++ .++++++|||+|||+||+|.++++++++.|.++|+.|.++++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEec
Confidence 778999999999999999999886 5999999997 699999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC-CC-eEEcccCccccCC-CCCeEecCCchhhh
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD-AP-MFVCGVNLDKYDP-SHSVVSNASCTTNC 154 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d-~p-~vV~gVN~~~~~~-~~~IISnaSCTTn~ 154 (364)
++|++++|++.++||||||||.|+++|+++.|+++||||||||+|++| +| +||||||++.|++ .++|||||||||||
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn~ 159 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNC 159 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHHH
Confidence 999999998889999999999999999999999999999999999987 78 9999999999997 47899999999999
Q ss_pred HHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEece
Q psy8544 155 LAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVP 234 (364)
Q Consensus 155 Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVP 234 (364)
|+|++|+||++|||++++||||||+|++|+++|+++ ++||++|++++||||++||++++++||||||+||+++|++|||
T Consensus 160 lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~-~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRVP 238 (380)
T 2d2i_A 160 LAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (380)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHhcCeeEEEEEEEeeccccchhhccch-hhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEec
Confidence 999999999999999999999999999999999997 8999999999999999999999999999999999999999999
Q ss_pred eccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecC
Q psy8544 235 VPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDN 314 (364)
Q Consensus 235 v~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDN 314 (364)
|++||+++++++|+|++++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++|+||++||||
T Consensus 239 t~~gs~~dlt~~l~k~~t~eeI~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~wyDN 318 (380)
T 2d2i_A 239 TPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDN 318 (380)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECT
T ss_pred cCCEEEEEEEEEECCcCCHHHHHHHHHHHhhCCCCCccCCcCCCeeeeeeCCCCcceEEecccCceecCCEEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhhHHHHHHhcc
Q psy8544 315 EYGYSCRVLDLIQYMKSK 332 (364)
Q Consensus 315 E~gys~r~~dl~~~~~~~ 332 (364)
||||||||+||+.||.++
T Consensus 319 e~gys~r~~d~~~~~~~~ 336 (380)
T 2d2i_A 319 EWGYSQRVVDLAELAARK 336 (380)
T ss_dssp THHHHHHHHHHHHHHHTT
T ss_pred CcchHhHHHHHHHHHHhh
Confidence 999999999999999886
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=2.2e-107 Score=799.90 Aligned_cols=329 Identities=46% Similarity=0.753 Sum_probs=319.0
Q ss_pred CceEEEEccChHHHHHHHHHhcC---CCcEEEEeCCCCCHHHHHHHhhcccccccCCccee-ecCCeEEECCEEEEEEec
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR---NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVK-TEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~---~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~-~~~~~l~i~gk~I~v~~~ 77 (364)
++||||||||||||+++|+|+++ ++|||+|||+ +|+++++|||+|||+||+|.+++. .+++.|.++|+.|.++++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~ 79 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSD 79 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECC
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEec
Confidence 37999999999999999999987 7899999996 799999999999999999999999 678899999999999999
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC-CCeEEcccCccccCCCCCeEecCCchhhhHH
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD-APMFVCGVNLDKYDPSHSVVSNASCTTNCLA 156 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d-~p~vV~gVN~~~~~~~~~IISnaSCTTn~La 156 (364)
++|++++|++.++|+||||||.|+++++++.|+++|||+|++|+|+.| +|+||||||++.|++.++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~la 159 (337)
T 1rm4_O 80 RNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLA 159 (337)
T ss_dssp SCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred CChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHHH
Confidence 999999998889999999999999999999999999999999999876 7999999999999866899999999999999
Q ss_pred hHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceec
Q psy8544 157 PLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVP 236 (364)
Q Consensus 157 p~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~ 236 (364)
|++|+||++|||+++.||||||+|++|+++|+++ ++||++|++++||||++||++++++|++|||+||+++||+||||+
T Consensus 160 p~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~-~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~~ 238 (337)
T 1rm4_O 160 PFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTP 238 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCeeEEEEEEEEecCCccchhhcch-hhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecCC
Confidence 9999999999999999999999999999999986 899999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCC
Q psy8544 237 NVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEY 316 (364)
Q Consensus 237 ~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~ 316 (364)
+||++|++++++|++++|||+++|+++++|+|||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||||
T Consensus 239 ~gs~~dl~~~l~k~~t~eei~~~lk~a~~~~lkgil~y~~~~~vs~d~~~~~~s~i~d~~~~~~~~~~~~k~~~wydne~ 318 (337)
T 1rm4_O 239 NVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEW 318 (337)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTH
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHHHHhhCCcCceecCcCCCeeecccCCCCcccccchhccceecCCEEEEEEEECCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHhcc
Q psy8544 317 GYSCRVLDLIQYMKSK 332 (364)
Q Consensus 317 gys~r~~dl~~~~~~~ 332 (364)
||||||+||+.||.++
T Consensus 319 gys~r~~d~~~~~~~~ 334 (337)
T 1rm4_O 319 GYSQRVVDLADIVANK 334 (337)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred cchhhHHHHHHHHhhh
Confidence 9999999999999874
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=9.7e-107 Score=796.66 Aligned_cols=330 Identities=48% Similarity=0.771 Sum_probs=320.8
Q ss_pred CCceEEEEccChHHHHHHHHHhcC---CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR---NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~---~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
|++||||||||+|||.++|+|+++ +||||+||++ .++++++|||+|||+||+|.++++++++.|.++|+.|.++++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEec
Confidence 778999999999999999999886 5999999997 699999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC-CC-eEEcccCccccCC-CCCeEecCCchhhh
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD-AP-MFVCGVNLDKYDP-SHSVVSNASCTTNC 154 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d-~p-~vV~gVN~~~~~~-~~~IISnaSCTTn~ 154 (364)
++|++++|++.++|+||||||.|+++++++.|+++|+||||||+|++| +| +||||||++.|++ .++|||||||||||
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn~ 159 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNC 159 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhhH
Confidence 999999999889999999999999999999999999999999999987 78 9999999999997 47899999999999
Q ss_pred HHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEece
Q psy8544 155 LAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVP 234 (364)
Q Consensus 155 Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVP 234 (364)
|+|++|+||++|||++++||||||+|++|+++|+++ ++||++|++++||||++||++++++||+|+|+||++++|+|||
T Consensus 160 lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~-~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rVP 238 (339)
T 3b1j_A 160 LAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (339)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccch-hhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEec
Confidence 999999999999999999999999999999999997 7999999999999999999999999999999999999999999
Q ss_pred eccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecC
Q psy8544 235 VPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDN 314 (364)
Q Consensus 235 v~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDN 314 (364)
|++||+++++++++|++++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||
T Consensus 239 ~~~g~~~dl~v~l~k~~t~eeI~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydn 318 (339)
T 3b1j_A 239 TPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDN 318 (339)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHHHHHHSTTBTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECT
T ss_pred cCCEEEEEEEEEEcCcCCHHHHHHHHHHhhcCCCCCccCccCCceeehhcCCCCCceEEecccCceecCCEEEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhhHHHHHHhcc
Q psy8544 315 EYGYSCRVLDLIQYMKSK 332 (364)
Q Consensus 315 E~gys~r~~dl~~~~~~~ 332 (364)
||||||||+||+.||.++
T Consensus 319 e~gys~r~~d~~~~~~~~ 336 (339)
T 3b1j_A 319 EWGYSQRVVDLAELAARK 336 (339)
T ss_dssp THHHHHHHHHHHHHHHHT
T ss_pred CcchHhHHHHHHHHHhhh
Confidence 999999999999999874
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1.6e-106 Score=793.77 Aligned_cols=328 Identities=55% Similarity=0.896 Sum_probs=319.7
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
+||||||||||||+++|+|+++ +++||+||+. .++++++|||+|||+||+|.++++++++.|.++|+.|.++++++|+
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE 80 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCChh
Confidence 7999999999999999999999 9999999996 6999999999999999999999999999999999999999888999
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC-CCeEEcccCccccCC-CCCeEecCCchhhhHHhHH
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD-APMFVCGVNLDKYDP-SHSVVSNASCTTNCLAPLA 159 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d-~p~vV~gVN~~~~~~-~~~IISnaSCTTn~Lap~l 159 (364)
+++|++.++|+||||||.|+++|+++.|+++||||||||+|++| +|++|||||++.|++ .++||||||||||||+|++
T Consensus 81 ~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap~l 160 (334)
T 3cmc_O 81 NLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFA 160 (334)
T ss_dssp GCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHHHH
T ss_pred hcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHHHH
Confidence 99999889999999999999999999999999999999999987 799999999999986 4789999999999999999
Q ss_pred HHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceeccce
Q psy8544 160 KVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVS 239 (364)
Q Consensus 160 k~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~gs 239 (364)
||||++|||+++.||||||+||+|+++|+++ ++||++|++++||||++||++++++|+||+|+||+++|++||||++||
T Consensus 161 kpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~-~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~gs 239 (334)
T 3cmc_O 161 KVLHEQFGIVRGMMTTVHSYTNDQRILDLPH-KDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVS 239 (334)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSSCE
T ss_pred HHHHHhcCceeeeEEEEEeccchhhhccccc-cccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCCEE
Confidence 9999999999999999999999999999986 899999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCcch
Q psy8544 240 VVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYGYS 319 (364)
Q Consensus 240 ~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~gys 319 (364)
+++++++++|++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++|||||||||
T Consensus 240 ~~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys 319 (334)
T 3cmc_O 240 VVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYS 319 (334)
T ss_dssp EEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHHH
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHhhCccCCcccCCCCCEeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHhcc
Q psy8544 320 CRVLDLIQYMKSK 332 (364)
Q Consensus 320 ~r~~dl~~~~~~~ 332 (364)
|||+||+.||.++
T Consensus 320 ~r~~d~~~~~~~~ 332 (334)
T 3cmc_O 320 HRVVDLAAYIASK 332 (334)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhc
Confidence 9999999999765
No 17
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=6.3e-106 Score=793.83 Aligned_cols=331 Identities=64% Similarity=1.034 Sum_probs=318.3
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||||||+|||+++|+|+++ +||||+|||+..++++++|||+|||+||+|.+.++++++.|.+||+.|.++++++|
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp 96 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDP 96 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCG
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCCh
Confidence 57999999999999999999999 99999999955799999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC-CCeEEcccCccccCCC-CCeEecCCchhhhHHhH
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD-APMFVCGVNLDKYDPS-HSVVSNASCTTNCLAPL 158 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d-~p~vV~gVN~~~~~~~-~~IISnaSCTTn~Lap~ 158 (364)
++++|++.++|+||||||.|+++++++.|+++|+||||||+|++| +|+||||||++.|++. ++||||||||||||+|+
T Consensus 97 ~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~lap~ 176 (354)
T 3cps_A 97 AEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPL 176 (354)
T ss_dssp GGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHHH
T ss_pred HHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHHHHH
Confidence 999998789999999999999999999999999999999999986 7999999999999964 78999999999999999
Q ss_pred HHHHhhhcCeeEEEEEeeeccccchhhhcCCCc--ccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceec
Q psy8544 159 AKVIHDNFEILEGLMTTVHAVTATQKTVDAPSK--KMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVP 236 (364)
Q Consensus 159 lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~--~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~ 236 (364)
+|||+++|||+++.||||||+|++|+++|+++. ++||++|++++||||+++|++++++|+||+|+||+++|++||||+
T Consensus 177 lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~rVP~~ 256 (354)
T 3cps_A 177 AKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTP 256 (354)
T ss_dssp HHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEEeccC
Confidence 999999999999999999999999999999862 689999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCC
Q psy8544 237 NVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEY 316 (364)
Q Consensus 237 ~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~ 316 (364)
+||+++++++++|++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+||++||||||
T Consensus 257 ~gs~~dl~~~l~k~~t~eeI~~~~k~a~~~~lkgil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 336 (354)
T 3cps_A 257 DVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYDNES 336 (354)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECTTH
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHHHHhhCCCCCccCccCCCeeeEEEcCCCcceEEecccCeEecCCEEEEEEEECCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHhcc
Q psy8544 317 GYSCRVLDLIQYMKSK 332 (364)
Q Consensus 317 gys~r~~dl~~~~~~~ 332 (364)
||||||+||+.||.++
T Consensus 337 gys~r~~d~~~~~~~~ 352 (354)
T 3cps_A 337 GYSNRLVDLAVYVASR 352 (354)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred chHhHHHHHHHHHHhc
Confidence 9999999999999764
No 18
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.8e-105 Score=784.30 Aligned_cols=327 Identities=48% Similarity=0.825 Sum_probs=318.0
Q ss_pred ceEEEEccChHHHHHHHHHhcC---CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR---NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~---~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
+||||||||||||+++|+|+++ +||||+||+. .|+++++|||+|||+||+|.++++++++.|.++|+.|.++++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 5999999999999999999876 6999999996 69999999999999999999999999999999999999998889
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCCCC-eEEcccCccccCCCCCeEecCCchhhhHHhH
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKDAP-MFVCGVNLDKYDPSHSVVSNASCTTNCLAPL 158 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d~p-~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~ 158 (364)
|++++|++.++|+||||||.|+++++++.|+++|+||||||+|++|+| ++|||||++.|++.++||||||||||||+|+
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~lap~ 159 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAPI 159 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHHHH
Confidence 999999988999999999999999999999999999999999999999 9999999999986678999999999999999
Q ss_pred HHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceeccc
Q psy8544 159 AKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238 (364)
Q Consensus 159 lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~g 238 (364)
||||+++|||+++.||||||+||+|+++|+|+ ++||++|++++||||++||++++++|+||+|+||+++|++||||++|
T Consensus 160 lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~-~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~~g 238 (332)
T 1hdg_O 160 VKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPH-KDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDG 238 (332)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHhcCeeEeEEEEEEeccchhhhhcCcc-cccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEccccCc
Confidence 99999999999999999999999999999986 89999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCcc
Q psy8544 239 SVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYGY 318 (364)
Q Consensus 239 s~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~gy 318 (364)
|++++++++++++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++||||||||
T Consensus 239 ~l~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gy 318 (332)
T 1hdg_O 239 SITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGY 318 (332)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEETTTEEEEEEEECTTHHH
T ss_pred EEEEEEEEECCCCCHHHHHHHHHHHhhcccCCcccccCCCeeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHhc
Q psy8544 319 SCRVLDLIQYMKS 331 (364)
Q Consensus 319 s~r~~dl~~~~~~ 331 (364)
||||+||+.||.+
T Consensus 319 s~r~~d~~~~~~~ 331 (332)
T 1hdg_O 319 SNRVVDTLELLLK 331 (332)
T ss_dssp HHHHHHHHHHGGG
T ss_pred hhHHHHHHHHHhc
Confidence 9999999999975
No 19
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=5.6e-105 Score=783.92 Aligned_cols=332 Identities=65% Similarity=1.073 Sum_probs=321.4
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCC-cceee-cCCeEEECCEEEEEEec
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFK-GDVKT-EGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~-~~v~~-~~~~l~i~gk~I~v~~~ 77 (364)
|++||||||||||||.++|+|.++ +++||+|||+..++++++|||+|||+||+|. +.+++ +++.|.++|+.|.++++
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~ 81 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECC
T ss_pred CceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEec
Confidence 448999999999999999999998 9999999996469999999999999999999 99988 88999999999999988
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCCCCeEEcccCccccCCCCCeEecCCchhhhHHh
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAP 157 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d~p~vV~gVN~~~~~~~~~IISnaSCTTn~Lap 157 (364)
++|++++|++.++|+||||||.|.++|.++.|+++|+||||||+|++|+|++|||||++.|++.++||||||||||||+|
T Consensus 82 ~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la~ 161 (337)
T 3e5r_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAP 161 (337)
T ss_dssp SCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred CChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHHH
Confidence 89999999888999999999999999999999999999999999999999999999999998667899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceecc
Q psy8544 158 LAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPN 237 (364)
Q Consensus 158 ~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~ 237 (364)
++|||+++|||+++.|||+||+|++|+++|++++++||++|++++||||+++|++++++|+||||+||+++|++||||++
T Consensus 162 ~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~ 241 (337)
T 3e5r_O 162 LAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVD 241 (337)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccCC
Confidence 99999999999999999999999999999999867999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCc
Q psy8544 238 VSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYG 317 (364)
Q Consensus 238 gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~g 317 (364)
||+++++++++|++++|||+++|+++++++|||||+|+|+|+||+||+||+||||||+.+|++++++|+|+++|||||||
T Consensus 242 g~~~~l~~~l~k~~t~eei~~~~~~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~g 321 (337)
T 3e5r_O 242 VSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWG 321 (337)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHH
T ss_pred eEEEEEEEEECCCccHHHHHHHHHHHhhCCCCCcccCCCCCeeeeeecCCCCceEEecccCcEecCCEEEEEEEeCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhHHHHHHhcc
Q psy8544 318 YSCRVLDLIQYMKSK 332 (364)
Q Consensus 318 ys~r~~dl~~~~~~~ 332 (364)
|||||+||+.||.++
T Consensus 322 ys~r~~~~~~~~~~~ 336 (337)
T 3e5r_O 322 YSNRVIDLIRHMAKT 336 (337)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred hHhHHHHHHHHHhcc
Confidence 999999999999764
No 20
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=8.5e-105 Score=780.50 Aligned_cols=326 Identities=68% Similarity=1.088 Sum_probs=318.1
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
+||||||||||||+++|+|.++ +++||+||+. .++++++|||+|||+||+|.++++++++.|.+||+.|+++++++|+
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA 80 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCChh
Confidence 7999999999999999999999 9999999995 6999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-CCCeEEcccCccccCCCCCeEecCCchhhhHHhHHH
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLAK 160 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-d~p~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~lk 160 (364)
+++|++.++|+||||||.|+++++++.|+++|+|+|++|+|++ |+|++|||||++.|+ .++||||||||||||+|+||
T Consensus 81 ~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~lk 159 (330)
T 1gad_O 81 NLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPLAK 159 (330)
T ss_dssp GGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHHHH
T ss_pred hCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHHHH
Confidence 9999888999999999999999999999999999999999986 479999999999998 68899999999999999999
Q ss_pred HHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceeccceE
Q psy8544 161 VIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVSV 240 (364)
Q Consensus 161 ~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~gs~ 240 (364)
|||++|||+++.|||+||+|++|+++|++++++||++|++++||||+++|++++++++||||+||+++|++||||++||+
T Consensus 160 pL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~~ 239 (330)
T 1gad_O 160 VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV 239 (330)
T ss_dssp HHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSSCEE
T ss_pred HHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccccEEE
Confidence 99999999999999999999999999999878999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCcchh
Q psy8544 241 VDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYGYSC 320 (364)
Q Consensus 241 ~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~gys~ 320 (364)
+++++++++++++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||||||||
T Consensus 240 ~~l~~~l~k~~t~eei~~~~k~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~ 319 (330)
T 1gad_O 240 VDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSN 319 (330)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEETTTCEEEETTEEEEEEEECTTHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHhcCCCCCEEeeECCceeeeeECCCCcceEEecccCeEecCCEEEEEEEECCCchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHh
Q psy8544 321 RVLDLIQYMK 330 (364)
Q Consensus 321 r~~dl~~~~~ 330 (364)
||+||+.||.
T Consensus 320 r~~d~~~~~~ 329 (330)
T 1gad_O 320 KVLDLIAHIS 329 (330)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 9999999985
No 21
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=1.2e-104 Score=782.05 Aligned_cols=331 Identities=36% Similarity=0.641 Sum_probs=309.8
Q ss_pred CCceEEEEccChHHHHHHHHHhc---C-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEe
Q psy8544 1 MAYKIGINGFGRIGRLVLREALH---R-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQ 76 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~---~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~ 76 (364)
|++||||||||+|||.++|+|++ + +||||+||+. .++++++|||+|||+||+|.++++++++.|.++|+.|.+++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~ 79 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLH 79 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEe
Confidence 77899999999999999999999 8 9999999997 69999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC-CCCC-eEEcccCccccCCCCCeEecCCchhhh
Q psy8544 77 KMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS-KDAP-MFVCGVNLDKYDPSHSVVSNASCTTNC 154 (364)
Q Consensus 77 ~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps-~d~p-~vV~gVN~~~~~~~~~IISnaSCTTn~ 154 (364)
+++|++++|++.++|+||||||.|+++++++.|+++|+||||||+|+ .|+| ++|||||++.|+++.+|||||||||||
T Consensus 80 ~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn~ 159 (339)
T 2x5j_O 80 ERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNC 159 (339)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHHH
Confidence 88999999987899999999999999999999999999999999998 6788 999999999998657999999999999
Q ss_pred HHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEece
Q psy8544 155 LAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVP 234 (364)
Q Consensus 155 Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVP 234 (364)
|+|++||||++|||+++.|||+||+|++|+++|+++ ++||++|++++||||++||++++++++||+|+||+++|++|||
T Consensus 160 lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~-~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP 238 (339)
T 2x5j_O 160 IIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYH-PDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVP 238 (339)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEECS
T ss_pred HHHHHHHHHHccCcceeeEEEEEecccccccccccc-ccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEec
Confidence 999999999999999999999999999999999987 7999999999999999999999999999999999999999999
Q ss_pred eccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecC
Q psy8544 235 VPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDN 314 (364)
Q Consensus 235 v~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDN 314 (364)
|++||++++++++++++++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||
T Consensus 239 ~~~g~~~~l~v~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydn 318 (339)
T 2x5j_O 239 TINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDN 318 (339)
T ss_dssp SCSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEEEEEEEETTTEEEEEEEECH
T ss_pred ccCcEEEEEEEEECCCCCHHHHHHHHHHHhhcCCCcEEcccCCcccccccCCCCCceEEEcccceeccCCEEEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhhHHHHHHhccC
Q psy8544 315 EYGYSCRVLDLIQYMKSKD 333 (364)
Q Consensus 315 E~gys~r~~dl~~~~~~~~ 333 (364)
||||||||+||+.||.++.
T Consensus 319 e~gys~r~~d~~~~~~~~~ 337 (339)
T 2x5j_O 319 EWGFANRMLDTTLAMATVA 337 (339)
T ss_dssp HHHHHHHHHHHHHHHHCC-
T ss_pred CcccHhHHHHHHHHHhhhh
Confidence 9999999999999997653
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=6.7e-104 Score=775.94 Aligned_cols=332 Identities=68% Similarity=1.086 Sum_probs=321.2
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
|++||||||||||||.++|+|.++ +++||+|||+..++++++||++|||+||+|.++++++++.|.++|+.|+++++++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d 81 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD 81 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred CceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCC
Confidence 458999999999999999999988 8999999995469999999999999999999999999999999999999999899
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCCCCeEEcccCccccCCCCCeEecCCchhhhHHhHH
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKDAPMFVCGVNLDKYDPSHSVVSNASCTTNCLAPLA 159 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d~p~vV~gVN~~~~~~~~~IISnaSCTTn~Lap~l 159 (364)
|++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|++|+|++|||||++.|++.++||||||||||||+|+|
T Consensus 82 ~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~~~l 161 (335)
T 1u8f_O 82 PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLA 161 (335)
T ss_dssp GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHHHHH
T ss_pred HHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHHHHH
Confidence 99999988899999999999999999999999999999999998889999999999999866789999999999999999
Q ss_pred HHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceeccce
Q psy8544 160 KVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNVS 239 (364)
Q Consensus 160 k~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~gs 239 (364)
|||+++|||++++|||+|++||+|+.+|++++++||++|++++||||+++|++++++|+||||+||+++|++||||++||
T Consensus 162 kpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~ 241 (335)
T 1u8f_O 162 KVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVS 241 (335)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCSSCE
T ss_pred HHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccCCEE
Confidence 99999999999999999999999999999875799999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCCcceecCceEEEEEEecCCCcch
Q psy8544 240 VVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNEYGYS 319 (364)
Q Consensus 240 ~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE~gys 319 (364)
+++++++++|++++|||+++|+++++++|||||+|+|+|+||+||+|++||||||+.+|++++++|+||++|||||||||
T Consensus 242 ~~~l~~~l~~~~t~eei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gy~ 321 (335)
T 1u8f_O 242 VVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYS 321 (335)
T ss_dssp EEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHH
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHhhCccCcEEcccCCCcceeeecCCCCceEEeCCCCEEecCCEEEEEEEEcCcchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHhcc
Q psy8544 320 CRVLDLIQYMKSK 332 (364)
Q Consensus 320 ~r~~dl~~~~~~~ 332 (364)
|||+||+.||.++
T Consensus 322 ~r~~~~~~~~~~~ 334 (335)
T 1u8f_O 322 NRVVDLMAHMASK 334 (335)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhcc
Confidence 9999999999865
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.5e-61 Score=475.04 Aligned_cols=239 Identities=23% Similarity=0.283 Sum_probs=217.5
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcc--cccccC--Ccce-eecCCeEEECCEEEEE
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYD--STHGRF--KGDV-KTEGNNIVVNGKKIAV 74 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~yd--S~~g~~--~~~v-~~~~~~l~i~gk~I~v 74 (364)
|++||||||||+|||.++|+|.++ +|+||+|||+ ++++++||++|| |+||+| ++.+ +++++.+.+++.
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~---- 74 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGT---- 74 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCB----
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCc----
Confidence 678999999999999999999988 8999999996 699999999999 999999 6666 566777777663
Q ss_pred EecCCCCCCCCcCCCccEEEeecCCCCCHhhHH-HHHhCCCCEEEEeCCCC-C-CC-eEEcccCccccCCCCCeEecCCc
Q psy8544 75 FQKMKPEEIPWSQTGAEYIVESTGVFKTKDTAS-AHLKGGAKKVIITAPSK-D-AP-MFVCGVNLDKYDPSHSVVSNASC 150 (364)
Q Consensus 75 ~~~~~p~~~~w~~~gvDiV~estG~f~s~e~a~-~hl~aGakkVIIsaps~-d-~p-~vV~gVN~~~~~~~~~IISnaSC 150 (364)
+..+.| ++|+||||||.+.+.++++ .|+++| ++||+|+|++ | +| |||||||+++|++ ++|||||||
T Consensus 75 -----~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~sC 144 (343)
T 2yyy_A 75 -----ILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVVSC 144 (343)
T ss_dssp -----GGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEECCH
T ss_pred -----hHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc-CCEEeccch
Confidence 444446 7999999999999999996 999999 5689999987 5 79 9999999999985 789999999
Q ss_pred hhhhHHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecC----CCChHHHHHHHccCCCCce
Q psy8544 151 TTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPA----STGAAKAVAKVIPDLEGKL 226 (364)
Q Consensus 151 TTn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~----~tGaak~~~kVlPeL~gki 226 (364)
|||||+|+||+||++|||++++||||||+|+ ++ +++|++++||||+ ++|++|+++||+|+|+||+
T Consensus 145 tT~~lap~lk~L~~~fgI~~~~vtT~~a~sg-------~~----~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~gkl 213 (343)
T 2yyy_A 145 NTTGLCRILYAINSIADIKKARIVLVRRAAD-------PN----DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEGKI 213 (343)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEEESSC-------TT----CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTTSE
T ss_pred hhHHHHHHHHHHHHHcCceEEEEEeeeeccC-------cC----cchhhHHhcccCCCCCCCCcchHHHHHhhhccccce
Confidence 9999999999999999999999999999997 22 5677999999999 9999999999999999999
Q ss_pred eeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCC
Q psy8544 227 TGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQG 266 (364)
Q Consensus 227 ~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~ 266 (364)
+++|+||||++||+++|+++|++++++|||+++|+++++.
T Consensus 214 ~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a~~v 253 (343)
T 2yyy_A 214 LTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIKKTPRI 253 (343)
T ss_dssp EEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHHHSTTE
T ss_pred eeEEEEecccceEEEEEEEEECCCCCHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999864
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-51 Score=402.30 Aligned_cols=293 Identities=19% Similarity=0.258 Sum_probs=236.6
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
|||||+| ||+|||.++|+|++++++++.+. ++. +.+.+++.+.++|+.+.++.. +++
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~-----------~~~----------s~~~~g~~l~~~g~~i~v~~~-~~~ 58 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELR-----------LYA----------SPRSAGVRLAFRGEEIPVEPL-PEG 58 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCE-----------EEE----------CGGGSSCEEEETTEEEEEEEC-CSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEE-----------Eee----------ccccCCCEEEEcCceEEEEeC-Chh
Confidence 4899999 99999999999997766653332 221 124457789999999999765 555
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCccccCCCCCeEecCCchhhhHH
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNLDKYDPSHSVVSNASCTTNCLA 156 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~~~~~~~~~IISnaSCTTn~La 156 (364)
+| ++|+||+|||.+.++++++.|+++|+ +||+++++ |+|++|||||++.|+..++|||||||||||++
T Consensus 59 --~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt~~~ 131 (331)
T 2yv3_A 59 --PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTAILA 131 (331)
T ss_dssp --CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHHHHH
T ss_pred --hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHHHHH
Confidence 58 79999999999999999999999999 56777764 58999999999999864679999999999999
Q ss_pred hHHHHHhhhcCeeEEEEEeeeccccc------------hhhhcCCCcccccccccccceeecCC--------CChHHHH-
Q psy8544 157 PLAKVIHDNFEILEGLMTTVHAVTAT------------QKTVDAPSKKMWRDGRGANQNIIPAS--------TGAAKAV- 215 (364)
Q Consensus 157 p~lk~L~d~fGI~~~~~TTvha~t~~------------q~~~D~~~~~d~r~~r~~a~NIIP~~--------tGaak~~- 215 (364)
|+|+||+++|||++++|||+|++||+ |+++|+++.++||++|++++||+|++ |++++.+
T Consensus 132 ~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~~i~ 211 (331)
T 2yv3_A 132 MALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEMKVV 211 (331)
T ss_dssp HHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHHHHH
T ss_pred HHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHHHHH
Confidence 99999999999999999999999999 88899887789999999999999998 8887767
Q ss_pred ---HHHc--cCCCCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCcc---ccccCCceEeecCCCC
Q psy8544 216 ---AKVI--PDLEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGI---LGYTEDEVVSSDFNGE 287 (364)
Q Consensus 216 ---~kVl--PeL~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgi---l~~~e~~~VS~df~~~ 287 (364)
+|++ |+| ++++|++|||+++||++++++++++++++|||+++|++++--.+..- ..|+. | .+..|.
T Consensus 212 ~e~~kil~~~~l--~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~~~v~v~~~~~~~~~p~-~---~~~~g~ 285 (331)
T 2yv3_A 212 WETHKIFGDDTI--RISATAVRVPTLRAHAEAVSVEFARPVTPEAAREVLKEAPGVEVVDEPEAKRYPM-P---LTASGK 285 (331)
T ss_dssp HHHHHHTTCTTC--EEEEECCBCSCSSEEEEEEEEEESSCCCHHHHHHHHTTSTTCCBCCBTTTTBCCC-H---HHHTTC
T ss_pred HHHHHHhCCCCc--eEEEEEEEeccCceEEEEEEEEECCCCCHHHHHHHHHcCCCeEEEeCCCcCCCCC-h---hhccCC
Confidence 8998 888 49999999999999999999999999999999999998653111100 01211 1 144554
Q ss_pred CceeEEecCCcceecCceEEEEEEecCC-CcchhhhhHHHHHHhc
Q psy8544 288 VCSSVFDAKAGIALNKNFVKLVTWYDNE-YGYSCRVLDLIQYMKS 331 (364)
Q Consensus 288 ~~s~i~d~~~~~~~~~~~~kl~~WyDNE-~gys~r~~dl~~~~~~ 331 (364)
.+-.|--..... ..++.+.++++.||- +|.|-+-|-.|++|.+
T Consensus 286 ~~~~igr~~~d~-~~~~~l~~~~~~DNl~kGAAg~AVq~~nl~~~ 329 (331)
T 2yv3_A 286 WDVEVGRIRKSL-AFENGLDFFVVGDQLLKGAALNAVQIAEEWLK 329 (331)
T ss_dssp SSEEEEEEEECS-SSTTEEEEEEEEETTHHHHTTHHHHHHHHHC-
T ss_pred ceEEEEEEEECC-CCCCEEEEEEEechHHHHHHHHHHHHHHHHhh
Confidence 444432111110 134578999999999 8999998888888754
No 25
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.4e-49 Score=387.34 Aligned_cols=299 Identities=14% Similarity=0.139 Sum_probs=234.7
Q ss_pred CCceEEEEc-cChHHHHHHHHHhc--C-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEe
Q psy8544 1 MAYKIGING-FGRIGRLVLREALH--R-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQ 76 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~--~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~ 76 (364)
|++||+|+| ||+|||.++|+|.+ + .++++++++.. + .+..+.++|+.+.+.
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~-------------~-----------~g~~~~~~g~~i~~~- 59 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE-------------S-----------AGQRMGFAESSLRVG- 59 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT-------------T-----------TTCEEEETTEEEECE-
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC-------------C-----------CCCccccCCcceEEe-
Confidence 357999999 99999999999984 4 78999998641 1 123455777777764
Q ss_pred cCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC--CCCeEEcccCccccCCCC--CeEecCCchh
Q psy8544 77 KMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK--DAPMFVCGVNLDKYDPSH--SVVSNASCTT 152 (364)
Q Consensus 77 ~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~--d~p~vV~gVN~~~~~~~~--~IISnaSCTT 152 (364)
+.+++. |. ++|+||+|+|.+.+++.++.|+++|+|+|.+|++.. ++|++|||||++.++... +|||||||+|
T Consensus 60 ~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 135 (340)
T 2hjs_A 60 DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAVA 135 (340)
T ss_dssp EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHHH
T ss_pred cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHHH
Confidence 334543 75 899999999999999999999999998777787764 369999999999998532 7999999999
Q ss_pred hhHHhHHHHHhhhcCeeEEEEEeeeccccchh-hhcCCCc--ccccc---------cccccceeecCCC-----C-----
Q psy8544 153 NCLAPLAKVIHDNFEILEGLMTTVHAVTATQK-TVDAPSK--KMWRD---------GRGANQNIIPAST-----G----- 210 (364)
Q Consensus 153 n~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~-~~D~~~~--~d~r~---------~r~~a~NIIP~~t-----G----- 210 (364)
||++|+|+||+++|||++++|||+|++||+|+ .+|+++. ++||+ +|++++|+||+++ |
T Consensus 136 t~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee 215 (340)
T 2hjs_A 136 AELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAIE 215 (340)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBHHH
T ss_pred HHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccHHH
Confidence 99999999999999999999999999999996 4775431 45555 4789999999987 7
Q ss_pred --hHHHHHHHccCCCCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCC
Q psy8544 211 --AAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEV 288 (364)
Q Consensus 211 --aak~~~kVlPeL~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~ 288 (364)
..++++||+|++++++++||+|||+++||++++++++++++++|||+++|++++- --++...+-|-...+..|..
T Consensus 216 ~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~~~~---V~v~~~~~~p~~~~~v~g~~ 292 (340)
T 2hjs_A 216 RRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDATKG---IEWVGEGDYPTVVGDALGQD 292 (340)
T ss_dssp HHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHSTT---EEECCTTCCCCCCCCCTTSS
T ss_pred HHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCCCCHHHHHHHHhcCCC---cEEeCCCCCCccHHHcCCCC
Confidence 4556688999999999999999999999999999999999999999999997552 22222111121111445544
Q ss_pred ceeEEecCCcceecCceEEEEEEecC-CCcchhhhhHHHHHHhcc
Q psy8544 289 CSSVFDAKAGIALNKNFVKLVTWYDN-EYGYSCRVLDLIQYMKSK 332 (364)
Q Consensus 289 ~s~i~d~~~~~~~~~~~~kl~~WyDN-E~gys~r~~dl~~~~~~~ 332 (364)
+..|--.+.... .++.+.+.+|.|| .+|.|-.-|-.+++|.++
T Consensus 293 ~~~vgr~r~~~~-~~~~l~~~~~~DNl~kGAA~~avq~~~l~~~~ 336 (340)
T 2hjs_A 293 ETYVGRVRAGQA-DPCQVNLWIVSDNVRKGAALNAVLLGELLIKH 336 (340)
T ss_dssp CEEEEEEEECSS-CTTEEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCC-CCCEEEEEEEechHHHHHHHHHHHHHHHHHHh
Confidence 444433222211 3567899999999 999999999888888654
No 26
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=2e-48 Score=382.11 Aligned_cols=295 Identities=20% Similarity=0.220 Sum_probs=215.7
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC---CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR---NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~---~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
++||||+| ||+|||.++|+|+++ +++++++++.. + .|..+.++|+.+.+. +
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-------------~-----------~G~~~~~~~~~i~~~-~ 57 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-------------S-----------EGKTYRFNGKTVRVQ-N 57 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-------------T-----------TTCEEEETTEEEEEE-E
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-------------C-----------CCCceeecCceeEEe-c
Confidence 58999999 999999999999987 57899998641 1 133455788887773 3
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCccccCCC--CCeEecCCc
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNLDKYDPS--HSVVSNASC 150 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~~~~~~~--~~IISnaSC 150 (364)
.+++ +|. ++|+||+|+|.+.++++++.|+++|+ ++|+++++ ++|++|||||++.|+.. .+|||||||
T Consensus 58 ~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C 131 (336)
T 2r00_A 58 VEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGV--VVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNC 131 (336)
T ss_dssp GGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCH
T ss_pred CChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCC--EEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCCh
Confidence 4443 684 89999999999999999999999999 55666654 58999999999999852 679999999
Q ss_pred hhhhHHhHHHHHhhhcCeeEEEEEeeeccccchh-hhcCCCc-----------ccccccccccceeecCCC-----Ch--
Q psy8544 151 TTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQK-TVDAPSK-----------KMWRDGRGANQNIIPAST-----GA-- 211 (364)
Q Consensus 151 TTn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~-~~D~~~~-----------~d~r~~r~~a~NIIP~~t-----Ga-- 211 (364)
+|||++|+|+||+++|||++++|||+|++||+|+ .+|+++. .+++++|++++|+||+++ |+
T Consensus 132 ~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~ 211 (336)
T 2r00_A 132 STIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTK 211 (336)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSCBH
T ss_pred HHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccH
Confidence 9999999999999999999999999999999975 7777642 378999999999999975 74
Q ss_pred -----HHHHHHHccCCCCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCC
Q psy8544 212 -----AKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNG 286 (364)
Q Consensus 212 -----ak~~~kVlPeL~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~ 286 (364)
.++++|++|++++++++||+|||+++||++++++++++++++|||+++|++++- --++...+-|-.-.+..|
T Consensus 212 Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~~t~~ei~~~~~~~~~---v~v~~~~~~p~~~~~v~g 288 (336)
T 2r00_A 212 EEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAPIDAEQVMDMLEQTDG---IELFRGADFPTQVRDAGG 288 (336)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSCCCHHHHHHHHHHSTT---EEECCCCSSGGGCCCCCS
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCCCCHHHHHHHHHhCCC---eEEECCCCCCcCHHHhCC
Confidence 566688999999999999999999999999999999999999999999998542 112221111211113444
Q ss_pred CCceeEEecCCcceecCceEEEEEEecCC-CcchhhhhHHHHHHhc
Q psy8544 287 EVCSSVFDAKAGIALNKNFVKLVTWYDNE-YGYSCRVLDLIQYMKS 331 (364)
Q Consensus 287 ~~~s~i~d~~~~~~~~~~~~kl~~WyDNE-~gys~r~~dl~~~~~~ 331 (364)
..+-.|--.+.... .++.+.++++.||- +|-|-+-|-.|+.|.+
T Consensus 289 ~~~~~vgr~~~d~~-~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~~ 333 (336)
T 2r00_A 289 KDHVLVGRVRNDIS-HHSGINLWVVADNVRKGAATNAVQIAELLVR 333 (336)
T ss_dssp SSCEEEEEEEEETT-EEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEecCC-CCCEEEEEEEehhHHHhHHHHHHHHHHHHHh
Confidence 33333311111000 23467888999997 7888888877777754
No 27
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.1e-49 Score=391.29 Aligned_cols=271 Identities=20% Similarity=0.263 Sum_probs=220.3
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcc--cccccCCcce-eecCCeEEECCEEEEEEecC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYD--STHGRFKGDV-KTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~yd--S~~g~~~~~v-~~~~~~l~i~gk~I~v~~~~ 78 (364)
+||||+|+|+|||.++|+|.++ +|++++|++. ++++.+++++|+ ++|++|.+.+ ..++..+.+++.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~-------- 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGT-------- 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEE--------
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccccceeeecCCceEEcCC--------
Confidence 7999999999999999999987 9999999996 678888999988 8999998765 444455655432
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-CC--CeEEcccCccccCCCCCeEecCCchhhhH
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-DA--PMFVCGVNLDKYDPSHSVVSNASCTTNCL 155 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-d~--p~vV~gVN~~~~~~~~~IISnaSCTTn~L 155 (364)
++++.| ++|+||+|||.+.+++.++.|+++|++ ||+++|.+ |+ |+||||||++.+++ .+|||||||+||||
T Consensus 72 -~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt~l 145 (337)
T 1cf2_P 72 -VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTTGL 145 (337)
T ss_dssp -HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHHHH
T ss_pred -HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHHHH
Confidence 222222 799999999999999999999999964 77777765 34 99999999999984 68999999999999
Q ss_pred HhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecC----CCChHHHHHHHccCCCCceeeEEE
Q psy8544 156 APLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPA----STGAAKAVAKVIPDLEGKLTGMAF 231 (364)
Q Consensus 156 ap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~----~tGaak~~~kVlPeL~gki~~~av 231 (364)
+|+|+||+++|||+++.|||||++|+ |+ +++|++++||+|+ .++.+++++|+| +| ++++||+
T Consensus 146 ~~~l~pL~~~~gI~~~~vtt~~a~s~-------p~----~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l--~v~~t~~ 211 (337)
T 1cf2_P 146 CRTLKPLHDSFGIKKVRAVIVRRGAD-------PA----QVSKGPINAIIPNPPKLPSHHGPDVKTVL-DI--NIDTMAV 211 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEESSC-------TT----CTTCCCSSCCEESSSSSSCTHHHHHHTTS-CC--CEEEEEE
T ss_pred HHHHHHHHHhcCcceeEEEEEEEeec-------CC----ccccchhcCEEeccCCCCCcchHHHHhhh-ee--EEEEEEE
Confidence 99999999999999999999999986 32 4556899999999 688889999999 88 4999999
Q ss_pred eceeccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCCceEeecCCCCCceeEEecCC--cceecCceEEEE
Q psy8544 232 RVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTEDEVVSSDFNGEVCSSVFDAKA--GIALNKNFVKLV 309 (364)
Q Consensus 232 RVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~~~VS~df~~~~~s~i~d~~~--~~~~~~~~~kl~ 309 (364)
||||++||+++++++|++++++||++++|++++..++ +..+++-++.+.+|+... +..- .++.++.
T Consensus 212 rVPv~~g~~~~~~v~l~~~~t~eei~~~~~~~~~v~v-----------~~~~~~~~~~~~~~~~~~~~gr~r-~d~~~~~ 279 (337)
T 1cf2_P 212 IVPTTLMHQHNVMVEVEETPTVDDIIDVFEDTPRVIL-----------ISAEDGLTSTAEIMEYAKELGRSR-NDLFEIP 279 (337)
T ss_dssp EESCCSCEEEEEEEEESSCCCHHHHHHHHHHSTTEEE-----------ECTTTTCCSHHHHHHHHHHHTCGG-GCCCSEE
T ss_pred EcCccCeEEEEEEEEECCCCCHHHHHHHHHhCCCcEE-----------eccccCCCCCcchhhhhhhcCCCc-cCchhhe
Confidence 9999999999999999999999999999999974321 111222233333333211 1212 2378889
Q ss_pred EEecCC
Q psy8544 310 TWYDNE 315 (364)
Q Consensus 310 ~WyDNE 315 (364)
.||||-
T Consensus 280 ~w~~~~ 285 (337)
T 1cf2_P 280 VWRESI 285 (337)
T ss_dssp EEGGGC
T ss_pred eehhee
Confidence 999874
No 28
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=5.5e-47 Score=376.02 Aligned_cols=236 Identities=17% Similarity=0.176 Sum_probs=199.8
Q ss_pred ceEEEEc-cChHHHHHHH-HHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGING-FGRIGRLVLR-EALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr-~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
+||||+| ||+||+.++| +|.++++++++| +++.|+| +|+- +. .++|+.+.+....++
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i-----------~~~~~~s-~G~~---v~------~~~g~~i~~~~~~~~ 60 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRP-----------VFFSTSQ-LGQA---AP------SFGGTTGTLQDAFDL 60 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEE-----------EEEESSS-TTSB---CC------GGGTCCCBCEETTCH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEE-----------EEEEeCC-CCCC---cc------ccCCCceEEEecCCh
Confidence 7999999 9999999999 666678877554 6677786 7762 11 134555666554444
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCccccCCC--C--CeEecCCch
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNLDKYDPS--H--SVVSNASCT 151 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~~~~~~~--~--~IISnaSCT 151 (364)
+. |. ++|+||+|+|.+.++++++.|+++|+|++|||+|++ |+|++|||||++.++.. + ++|+|||||
T Consensus 61 ~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp~Ct 136 (367)
T 1t4b_A 61 EA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCT 136 (367)
T ss_dssp HH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred HH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeCCHH
Confidence 43 74 899999999999999999999999999999999987 68999999999999752 2 699999999
Q ss_pred hhhHHhHHHHHhhhcCeeEEEEEeeeccccchhh-------------------hcCCCcc---cccc-------------
Q psy8544 152 TNCLAPLAKVIHDNFEILEGLMTTVHAVTATQKT-------------------VDAPSKK---MWRD------------- 196 (364)
Q Consensus 152 Tn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~-------------------~D~~~~~---d~r~------------- 196 (364)
|+|++|+|+||+++|+|++++|||||++||+|+- +|+|+ + ||||
T Consensus 137 tt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~-~~ild~~r~~~~~~~~~~~~~ 215 (367)
T 1t4b_A 137 VSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPS-SAILDIERKVTTLTRSGELPV 215 (367)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTT-CCHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccc-cchhhhhhccccccccccCcc
Confidence 9999999999999999999999999999999532 34454 3 6655
Q ss_pred ---cccccceeecCCCC------------hHHHHHHHccC-CCCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHH
Q psy8544 197 ---GRGANQNIIPASTG------------AAKAVAKVIPD-LEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKV 260 (364)
Q Consensus 197 ---~r~~a~NIIP~~tG------------aak~~~kVlPe-L~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l 260 (364)
++++++|+||++++ ..++++|++|+ .+.+++++|+|||+++||++++++++++++++|||+++|
T Consensus 216 ~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~~t~eei~~~l 295 (367)
T 1t4b_A 216 DNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELL 295 (367)
T ss_dssp TTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSCCCHHHHHHHH
T ss_pred cccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCCCCHHHHHHHH
Confidence 68899999999988 67788999966 566899999999999999999999999999999999999
Q ss_pred HHcc
Q psy8544 261 KAAS 264 (364)
Q Consensus 261 ~~a~ 264 (364)
++++
T Consensus 296 ~~~~ 299 (367)
T 1t4b_A 296 AAHN 299 (367)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 9985
No 29
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=7.5e-46 Score=364.45 Aligned_cols=224 Identities=17% Similarity=0.264 Sum_probs=190.1
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
+||||+|+|+|||.++|+|.++ ++++++|+|. ++++.+++++++- +.++..++|+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~--~~~~~~~~a~~~g----------------------~~~~~~~~~~ 57 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT--SPNYEAFIAHRRG----------------------IRIYVPQQSI 57 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--SCSHHHHHHHHTT----------------------CCEECCGGGH
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC--ChHHHHHHHHhcC----------------------cceecCcCHH
Confidence 7999999999999999999988 9999999996 6777888887531 1112222232
Q ss_pred CCCCcC-------------CCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC--CCeEEcccCccccCCCCCeEe
Q psy8544 82 EIPWSQ-------------TGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD--APMFVCGVNLDKYDPSHSVVS 146 (364)
Q Consensus 82 ~~~w~~-------------~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d--~p~vV~gVN~~~~~~~~~IIS 146 (364)
.+ |++ .++|+||+|||.+.+++.++.|+++|+++|++|++..+ +++||+++|++.+.. .++||
T Consensus 58 ~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iIs 135 (340)
T 1b7g_O 58 KK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYIR 135 (340)
T ss_dssp HH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEEE
T ss_pred HH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCcc
Confidence 22 321 26899999999999999999999999988888887654 479999999777653 45999
Q ss_pred cCCchhhhHHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecC----CCChHHHHHHHccCC
Q psy8544 147 NASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPA----STGAAKAVAKVIPDL 222 (364)
Q Consensus 147 naSCTTn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~----~tGaak~~~kVlPeL 222 (364)
|||||||||+|+||+|+++|||++++|||+|+++. |+ ++ .|++.+||+|+ .+|+++++++++|+|
T Consensus 136 npsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~-------~~-~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~l 204 (340)
T 1b7g_O 136 VVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD-------QK-EV---KKGPINSLVPDPATVPSHHAKDVNSVIRNL 204 (340)
T ss_dssp ECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC-------TT-CC---SCCCSSCCEESSSSSSCTHHHHHHTTSTTC
T ss_pred cCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC-------cc-cc---hHHHHcCCCCCCcCCCCCchhHHHHhCCCC
Confidence 99999999999999999999999999999998852 32 33 45789999988 689999999999999
Q ss_pred CCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccC
Q psy8544 223 EGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQ 265 (364)
Q Consensus 223 ~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~ 265 (364)
+ ++++|+||||++||+++++++|++++++|||+++|+++++
T Consensus 205 ~--l~~~a~rVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a~~ 245 (340)
T 1b7g_O 205 D--IATMAVIAPTTLMHMHFINITLKDKVEKKDILSVLENTPR 245 (340)
T ss_dssp E--EEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHTCTT
T ss_pred c--EEEEEEEeccCCeEEEEEEEEECCCCCHHHHHHHHHcCCC
Confidence 5 9999999999999999999999999999999999998885
No 30
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.7e-46 Score=365.41 Aligned_cols=234 Identities=24% Similarity=0.286 Sum_probs=205.8
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcc--cccccCCcce-eecCCeEEECCEEEEEEe
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYD--STHGRFKGDV-KTEGNNIVVNGKKIAVFQ 76 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~yd--S~~g~~~~~v-~~~~~~l~i~gk~I~v~~ 76 (364)
|++||||+|+|+|||.++|+|.++ +++|++|+|. +++++.++++|+ ++||+|.+.+ ..+++.+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~------- 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAG------- 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSC-------
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCccccccccccceeccCCceEEcC-------
Confidence 778999999999999999999988 8999999996 688889999988 8999998765 22333333332
Q ss_pred cCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-C-C-CeEEcccCccccCCCCCeEecCCchhh
Q psy8544 77 KMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-D-A-PMFVCGVNLDKYDPSHSVVSNASCTTN 153 (364)
Q Consensus 77 ~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-d-~-p~vV~gVN~~~~~~~~~IISnaSCTTn 153 (364)
+++++.| ++|+|++|||.+.+.+.++.|+++| |+||+++|.+ | . |++|+|||++.|+. .+||+||||+|+
T Consensus 72 --d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~t~ 144 (334)
T 2czc_A 72 --TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCNTT 144 (334)
T ss_dssp --BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHHHH
T ss_pred --cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCcHHH
Confidence 2333334 7999999999999999999999999 5689999876 4 4 59999999999974 689999999999
Q ss_pred hHHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecC---CCChHHHHHHHccCCCCceeeEE
Q psy8544 154 CLAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPA---STGAAKAVAKVIPDLEGKLTGMA 230 (364)
Q Consensus 154 ~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~---~tGaak~~~kVlPeL~gki~~~a 230 (364)
||+|++++|++. |+++.|+|+|++|+. ||++|++++||+|+ .+|+++++++++| |+ ++++|
T Consensus 145 ~l~P~~~~l~~~--I~~g~i~ti~a~s~~-----------~~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~~~ 208 (334)
T 2czc_A 145 GLVRTLSAIREY--ADYVYAVMIRRAADP-----------NDTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IETMA 208 (334)
T ss_dssp HHHHHHHHHGGG--EEEEEEEEEEESSCT-----------TCCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEEEE
T ss_pred HHHHHHHHHHHH--hccccEEEEEEecCc-----------cccccChhhcEEeccCCCCchhhhhheEEE-EE--EEEEE
Confidence 999999999997 999999999999974 46678999999999 8999999999999 85 99999
Q ss_pred EeceeccceEEEEEEEeccCCCHHHHHHHHHHccCC
Q psy8544 231 FRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQG 266 (364)
Q Consensus 231 vRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~ 266 (364)
+||||+++|++++++++++++++||++++|+++++.
T Consensus 209 ~rVPv~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~ 244 (334)
T 2czc_A 209 FVVPTTLMHVHSVMVELKKPLTKDDVIDIFENTTRV 244 (334)
T ss_dssp EEESCSSCEEEEEEEEESSCCCHHHHHHHHHTSTTE
T ss_pred EEcCCCceEEEEEEEEECCCCCHHHHHHHHHhccCC
Confidence 999999999999999999999999999999999865
No 31
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.7e-43 Score=344.96 Aligned_cols=238 Identities=18% Similarity=0.213 Sum_probs=196.5
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+| ||+||+.++|+|.++ +++|++|++.. . . ....|+++|+.+. ++.+.++++.+.+ ++.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~--~-~--~g~~~~~~~~~~~------~~~~~~~~~~~~~-~~~d 71 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASP--S-K--IGKKYKDAVKWIE------QGDIPEEVQDLPI-VSTN 71 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCG--G-G--TTSBHHHHCCCCS------SSSCCHHHHTCBE-ECSS
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecCh--h-h--cCCCHHHhcCccc------ccccccCCceeEE-eeCC
Confidence 58999999 999999999999988 89999998431 0 0 1123677777653 1223333334444 3334
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCccccCC----------CCCe
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNLDKYDP----------SHSV 144 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~~~~~~----------~~~I 144 (364)
++. |. ++|+||+|||.+.+++.++.|+++|++ ||+++++ |.|++|||||++.|.. ..+|
T Consensus 72 ~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~~i 145 (350)
T 2ep5_A 72 YED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKGIL 145 (350)
T ss_dssp GGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSSEE
T ss_pred HHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCceE
Confidence 443 53 899999999999999999999999994 8888876 5899999999998873 2359
Q ss_pred EecCCchhhhHHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCCh-HHHH---HHHcc
Q psy8544 145 VSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGA-AKAV---AKVIP 220 (364)
Q Consensus 145 ISnaSCTTn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGa-ak~~---~kVlP 220 (364)
||||||+|+|++|+|+||+++|||++++|||+|++||+|+. +++ .+.+++|++|+++|+ .|.+ .++||
T Consensus 146 IanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~~------~~~~~~ni~py~~~~e~k~~~E~~~~l~ 217 (350)
T 2ep5_A 146 VKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GIS------FMAIEGNIIPYIKGEEDKIAKELTKLNG 217 (350)
T ss_dssp EECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SSB------HHHHTTCCBCCCTTHHHHHHHHHHHHTC
T ss_pred EEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CCC------ChHHhCCEEeccCCcchHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999876 221 346899999999996 6655 78999
Q ss_pred CCCC--------ceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccC
Q psy8544 221 DLEG--------KLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQ 265 (364)
Q Consensus 221 eL~g--------ki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~ 265 (364)
+|+| +++++++|||+++||+++++++++++++.|||+++|+++.+
T Consensus 218 ~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~~~ 270 (350)
T 2ep5_A 218 KLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLKNFKS 270 (350)
T ss_dssp EECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSCCCHHHHHHHHHTCCC
T ss_pred hccccccccccccEEEEeEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhc
Confidence 9876 79999999999999999999999999999999999999874
No 32
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=7.5e-42 Score=338.23 Aligned_cols=295 Identities=11% Similarity=0.094 Sum_probs=221.2
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+| ||+|||.++|+|.++ ++++++|++. .+. -.+|+++|++|.+.+ . ..+ .+ ++
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~-~~~-----g~~~~~~~~~~~~~v-~--~dl-------~~-~~-- 76 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD-RKA-----GQSMESVFPHLRAQK-L--PTL-------VS-VK-- 76 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS-TTT-----TSCHHHHCGGGTTSC-C--CCC-------BC-GG--
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc-hhc-----CCCHHHhCchhcCcc-c--ccc-------ee-cc--
Confidence 37999999 999999999999998 8999999985 222 267899999887653 1 111 11 11
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC---CC------------------CeEEc---ccCc
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK---DA------------------PMFVC---GVNL 135 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~---d~------------------p~vV~---gVN~ 135 (364)
++ .|. ++|+||+|||.+.+++.++.| ++|+ +||+++++ +. |.+|+ |+|+
T Consensus 77 -~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n~ 149 (359)
T 1xyg_A 77 -DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEILR 149 (359)
T ss_dssp -GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHHH
T ss_pred -hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCccCH
Confidence 22 575 899999999999999999999 9999 57777764 21 34455 5599
Q ss_pred cccCCCCCeEecCCchhhhHHhHHHHHhhhcCee--EEEEEeeeccccchhh-hcCCCcccccccccccceeecCCCChH
Q psy8544 136 DKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEIL--EGLMTTVHAVTATQKT-VDAPSKKMWRDGRGANQNIIPASTGAA 212 (364)
Q Consensus 136 ~~~~~~~~IISnaSCTTn~Lap~lk~L~d~fGI~--~~~~TTvha~t~~q~~-~D~~~~~d~r~~r~~a~NIIP~~tGaa 212 (364)
+.++. .+|||||||+|||++|+|+||+++|+|+ +++|||+|++||+|+. .|+++ .+ .++.|++|+.+|+.
T Consensus 150 ~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~-----~~~~ni~py~~~~h 222 (359)
T 1xyg_A 150 EDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANL-YS-----EIAEGISSYGVTRH 222 (359)
T ss_dssp HHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGB-HH-----HHTTCCEECSCSCC
T ss_pred HHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhh-hH-----HHhcCeeccccccc
Confidence 99984 6899999999999999999999999999 9999999999999984 66554 23 25789999998853
Q ss_pred H-------HHHHHccCCCCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCC-CCCccccccCCceEeecC
Q psy8544 213 K-------AVAKVIPDLEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQG-PMKGILGYTEDEVVSSDF 284 (364)
Q Consensus 213 k-------~~~kVlPeL~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~-~lkgil~~~e~~~VS~df 284 (364)
+ ++++++.+ +.+++++++|||+++||+++++++++++++.|||+++|+++.++ |+--++...+-|-. .+.
T Consensus 223 ~h~pEi~~~l~~~~~~-~~~v~~t~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~y~~~~~V~v~~~~~~p~~-~~v 300 (359)
T 1xyg_A 223 RHVPEIEQGLSDVAQS-KVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRT-HNV 300 (359)
T ss_dssp THHHHHHHHHHHHHTS-CCCCEEECEEESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCSSEEECCTTCCCBG-GGT
T ss_pred ccHHHHHHHHHHhcCC-CCCEEEEEEEecccceEEEEEEEEeCCCCCHHHHHHHHHHhhCCCCCEEEcCCCCCCCH-HHh
Confidence 2 22233221 23899999999999999999999999999999999999987653 33333321112211 144
Q ss_pred CCCCceeEEecCCcceecCceEEEEEEecCC-CcchhhhhHHHHHHhccCC
Q psy8544 285 NGEVCSSVFDAKAGIALNKNFVKLVTWYDNE-YGYSCRVLDLIQYMKSKDT 334 (364)
Q Consensus 285 ~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE-~gys~r~~dl~~~~~~~~~ 334 (364)
.|..+-.|- ..... ..+.+.++++.||- +|.|-+-|-.|+.|...+-
T Consensus 301 ~g~n~~~ig-~~~d~--~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~g~~e 348 (359)
T 1xyg_A 301 RGSNYCHMS-VFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIMLGYPE 348 (359)
T ss_dssp TTSSCEEEE-EEECS--STTEEEEEEEECTTTTTTHHHHHHHHHHHTTSCT
T ss_pred cCCCeEEEE-EEEeC--CCCEEEEEEEehhhhHhHHHHHHHHHHHHhCCCc
Confidence 444444332 11111 23568899999998 8999999999999987643
No 33
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.9e-41 Score=333.09 Aligned_cols=248 Identities=20% Similarity=0.252 Sum_probs=195.5
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeC-CCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHR-NTPVVGIND-PHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd-~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
|++||||+| ||+||+.++|+|.++ +++|+++++ .... .-++++.|+.+... .+..+++.+.+ .+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~------g~~~~~~~~~~~~~------~~~~~~~~~~~-~~ 73 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSA------GKKYKDACYWFQDR------DIPENIKDMVV-IP 73 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTT------TSBHHHHSCCCCSS------CCCHHHHTCBC-EE
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccc------cccHHHhccccccc------ccccCceeeEE-Ee
Confidence 558999999 999999999999988 899999984 2111 11246667765210 11112222233 22
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCccccCC----------CC
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNLDKYDP----------SH 142 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~~~~~~----------~~ 142 (364)
.++++ |.+.++|+||+|+|.+.+++.++.|+++|+ .|||+|++ +.|+++||+|++.|.. ..
T Consensus 74 ~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~--~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 149 (354)
T 1ys4_A 74 TDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGK--LIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDG 149 (354)
T ss_dssp SCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCSS
T ss_pred CCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCC--EEEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcccCC
Confidence 34544 643489999999999999999999999998 48999985 4799999999998863 23
Q ss_pred CeEecCCchhhhHHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCCh-HH---HHHHH
Q psy8544 143 SVVSNASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGA-AK---AVAKV 218 (364)
Q Consensus 143 ~IISnaSCTTn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGa-ak---~~~kV 218 (364)
+|||||||+|+|++|+|+||+++|||++++|+|+|++||+|+. +.+ .+.+++|++|+++|+ .| ++.++
T Consensus 150 ~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~~------~~~~~~ni~py~~~~~~k~~~Ei~~~ 221 (354)
T 1ys4_A 150 AIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GVP------SMAILDNLIPFIKNEEEKMQTESLKL 221 (354)
T ss_dssp EEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TSC------HHHHTTCCBSCCTTHHHHHHHHHHHH
T ss_pred eEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--ccc------chHHhCCEEeccCchhhHHHHHHHHH
Confidence 5999999999999999999999999999999999999999876 222 246899999999985 44 45667
Q ss_pred ccCCCC--------ceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCcccc
Q psy8544 219 IPDLEG--------KLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILG 273 (364)
Q Consensus 219 lPeL~g--------ki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~ 273 (364)
|+++.| +++++++|||+++||+++++++++++++.|||+++|+++.+.+..++.+
T Consensus 222 l~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~~~~~~~~~~~ 284 (354)
T 1ys4_A 222 LGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMDKFDPLKDLNLPT 284 (354)
T ss_dssp TSEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHCCTTTTSCCTT
T ss_pred HhccccccccCCCceEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhccccccccC
Confidence 887655 7999999999999999999999999999999999999998523334433
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=6.8e-40 Score=322.58 Aligned_cols=289 Identities=11% Similarity=0.030 Sum_probs=214.1
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+| ||+|||.++|+|.++ ++++++|++.. +. -.+|++.|++|.+. +.+.+ .+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~-~~-----g~~~~~~~~~~~g~------------~~~~~---~~ 62 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR-FA-----GEPVHFVHPNLRGR------------TNLKF---VP 62 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST-TT-----TSBGGGTCGGGTTT------------CCCBC---BC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch-hh-----CchhHHhCchhcCc------------ccccc---cc
Confidence 48999999 999999999999988 89999999841 22 25678888887642 11112 12
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----------------------CCCeEEcccCcc
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----------------------DAPMFVCGVNLD 136 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----------------------d~p~vV~gVN~~ 136 (364)
++ .| .++|+||+|+|.+.+++.++.|+++|++ ||+.+++ +.|+.+||+|++
T Consensus 63 ~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~--VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~ 136 (345)
T 2ozp_A 63 PE--KL--EPADILVLALPHGVFAREFDRYSALAPV--LVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYRE 136 (345)
T ss_dssp GG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSE--EEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHH
T ss_pred hh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCE--EEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHH
Confidence 22 37 3899999999999999999999999994 5655553 134555666999
Q ss_pred ccCCCCCeEecCCchhhhHHhHHHHHhhhcCee--EEEEEeeeccccchhh-hcCCCcccccccccccceeecCCCChHH
Q psy8544 137 KYDPSHSVVSNASCTTNCLAPLAKVIHDNFEIL--EGLMTTVHAVTATQKT-VDAPSKKMWRDGRGANQNIIPASTGAAK 213 (364)
Q Consensus 137 ~~~~~~~IISnaSCTTn~Lap~lk~L~d~fGI~--~~~~TTvha~t~~q~~-~D~~~~~d~r~~r~~a~NIIP~~tGaak 213 (364)
.++. .+|||||||+|||++|+|+||+++|+|+ +++|||+|++||+|+. +|.++ .+ .+..|++|+.+++
T Consensus 137 ~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~-----~~~~n~~py~~~~-- 207 (345)
T 2ozp_A 137 ALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASH-HP-----ERAGSIRVYKPTG-- 207 (345)
T ss_dssp HHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGC-HH-----HHTTCCEEEECSC--
T ss_pred Hhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCcccccccc-ch-----hhccccccCCCCC--
Confidence 9985 6899999999999999999999999999 9999999999999964 66553 23 3578999999885
Q ss_pred HHHHHccCCC-----C-ceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCC-CCCccccc--cC--CceEee
Q psy8544 214 AVAKVIPDLE-----G-KLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQG-PMKGILGY--TE--DEVVSS 282 (364)
Q Consensus 214 ~~~kVlPeL~-----g-ki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~-~lkgil~~--~e--~~~VS~ 282 (364)
.+++||++ + +++++++|||+++||+++++++++++++.|||+++|+++.++ |+--++.= .+ -|-.-
T Consensus 208 --h~~~pei~~~l~~~~~v~~~~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~y~~~~~v~v~~~~~~~~~~p~~~- 284 (345)
T 2ozp_A 208 --HRHTAEVVENLPGRPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAGEPFIRLVKQKKGVHRYPDPR- 284 (345)
T ss_dssp --CTHHHHHHHTSSSCCCEEEEEEECSCSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECCCSSSSCCSCCHH-
T ss_pred --ccChHhHHHHhCCCCCeEEEEEEeccccEEEEEEEEEeCCCCCHHHHHHHHHHHhCCCCCEEEEeCCCCcCCCCCHH-
Confidence 45666665 5 899999999999999999999999999999999999997653 22222200 00 11111
Q ss_pred cCCCCCceeEEecCCcceec--CceEEEEEEecCC-CcchhhhhHHHHHHhccCC
Q psy8544 283 DFNGEVCSSVFDAKAGIALN--KNFVKLVTWYDNE-YGYSCRVLDLIQYMKSKDT 334 (364)
Q Consensus 283 df~~~~~s~i~d~~~~~~~~--~~~~kl~~WyDNE-~gys~r~~dl~~~~~~~~~ 334 (364)
+-.|..+-.| + +..+ .+.+.+++=-||= +|=|-+-|-.|+.|...+-
T Consensus 285 ~~~g~~~~~i---g--~~~d~~~~~~~~~~~~DNl~kGAAg~Avq~~nl~~g~~e 334 (345)
T 2ozp_A 285 FVQGTNYADI---G--FELEEDTGRLVVMTAIDNLVKGTAGHALQALNVRMGWPE 334 (345)
T ss_dssp HHTTSCCEEE---E--EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHTTCCT
T ss_pred HhcCCceEEE---E--EEEeCCCCEEEEEEEeccHHHHHHHHHHHHHHHHhCcch
Confidence 2233222222 1 1111 2456676668994 6777777878888876533
No 35
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=3.3e-38 Score=312.67 Aligned_cols=300 Identities=15% Similarity=0.211 Sum_probs=216.2
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
|++||||+| +|.+|+.++|+|.+++++.+-+.- + . +.+..|..+.+.|+.+.+. +.+
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~-----------~--a--------s~~saG~~~~~~~~~~~~~-~~~ 58 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRY-----------L--A--------SARSAGKSLKFKDQDITIE-ETT 58 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEE-----------E--E--------CTTTTTCEEEETTEEEEEE-ECC
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEE-----------E--E--------ccccCCCcceecCCCceEe-eCC
Confidence 789999999 999999999999998776643321 1 1 1134566777888877763 334
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCccccCCCCCeEecCCchhhh
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNLDKYDPSHSVVSNASCTTNC 154 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~~~~~~~~~IISnaSCTTn~ 154 (364)
++. |. ++|+||+|+|.+.+++.++.|+++|+ +||+++++ |+|++|||||++.++...+|||||||+|+|
T Consensus 59 ~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC~tt~ 132 (366)
T 3pwk_A 59 ETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGV--VVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCSTIQ 132 (366)
T ss_dssp TTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCHHHHH
T ss_pred HHH--hc--CCCEEEECCChHhHHHHHHHHHHCCC--EEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCcHHHH
Confidence 443 43 89999999999999999999999999 46666653 579999999999998657899999999999
Q ss_pred HHhHHHHHhhhcCeeEEEEEeeeccccchhh-hc-----------C------CCcccc-----cccccccceeecCC---
Q psy8544 155 LAPLAKVIHDNFEILEGLMTTVHAVTATQKT-VD-----------A------PSKKMW-----RDGRGANQNIIPAS--- 208 (364)
Q Consensus 155 Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~-~D-----------~------~~~~d~-----r~~r~~a~NIIP~~--- 208 (364)
++++|+||+++|||+++.|||+|++||+++- ++ + ...+.+ ++-+++++|++|.+
T Consensus 133 ~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~~~ 212 (366)
T 3pwk_A 133 MMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVF 212 (366)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSSCB
T ss_pred HHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccceeccc
Confidence 9999999999999999999999999998652 21 1 000000 12278999999997
Q ss_pred --CChHHHHHHH-------ccCCCCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCcccccc---C
Q psy8544 209 --TGAAKAVAKV-------IPDLEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYT---E 276 (364)
Q Consensus 209 --tGaak~~~kV-------lPeL~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~---e 276 (364)
+|++++++|+ +.....+++.+|+|||+++||++.++++++++++.+|+++++++++. --++... .
T Consensus 213 ~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~~s~eei~~~l~~~~~---V~v~~~~~~~~ 289 (366)
T 3pwk_A 213 TDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAFPG---AVLEDDVAHQI 289 (366)
T ss_dssp CTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHSTT---EEECCBGGGTB
T ss_pred ccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCCCCHHHHHHHHHhCCC---cEEecCcccCC
Confidence 4777777654 44445679999999999999999999999999999999999999741 1111110 0
Q ss_pred CceEeecCCCCCceeEEecCCcceecCceEEEEEEecCC-CcchhhhhHHHHHHhccC
Q psy8544 277 DEVVSSDFNGEVCSSVFDAKAGIALNKNFVKLVTWYDNE-YGYSCRVLDLIQYMKSKD 333 (364)
Q Consensus 277 ~~~VS~df~~~~~s~i~d~~~~~~~~~~~~kl~~WyDNE-~gys~r~~dl~~~~~~~~ 333 (364)
-|-. .+..|.-+..|-=.+... ..++.+.+++=-||= +|=|-+-|-.|+.|.++.
T Consensus 290 ~P~~-~~v~gtn~~~Vgr~r~d~-~~~~~l~~~~~~DNL~KGAAg~AVQn~nlm~~~~ 345 (366)
T 3pwk_A 290 YPQA-INAVGSRDTFVGRIRKDL-DAEKGIHMWVVSDNLLKGAAWNSVQIAETLHERG 345 (366)
T ss_dssp CCCH-HHHTTCSSEEEEEEEECS-SCTTEEEEEEEECTTTTTTHHHHHHHHHHHHHTT
T ss_pred CCch-hHcCCCCEEEEEEEEecC-CCCCEEEEEEEEccHHHhHHHHHHHHHHHHHHcC
Confidence 0110 122333322221000000 123456777778994 677777777788877653
No 36
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=9.1e-39 Score=316.19 Aligned_cols=302 Identities=14% Similarity=0.177 Sum_probs=210.5
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+| +|.+|+.++|+|.+| .++|+.+......-+.+...+ +|... ..+.-+++.+.+ ++.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~-------p~~~~-----~~~~~~~~~~~v-~~~~ 73 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVV-------RWQTV-----GQVPKEIADMEI-KPTD 73 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHC-------CCCSS-----SCCCHHHHTCBC-EECC
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhc-------ccccc-----cccccccccceE-EeCC
Confidence 47999999 999999999999998 899988853210000011110 00000 000000011122 2223
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC---CCCeEEcccCccccCC--C--------CCeEe
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK---DAPMFVCGVNLDKYDP--S--------HSVVS 146 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~---d~p~vV~gVN~~~~~~--~--------~~IIS 146 (364)
++. | .++|+||+|+|.+.+++.++.|+++|++.|.+|++.. ++|++|||||++.++. . .+|||
T Consensus 74 ~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIa 149 (359)
T 4dpk_A 74 PKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVT 149 (359)
T ss_dssp GGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEE
T ss_pred HHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEE
Confidence 333 3 2899999999999999999999999996555555542 5899999999999853 1 25999
Q ss_pred cCCchhhhHHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCCh-HH---HHHHHccCC
Q psy8544 147 NASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGA-AK---AVAKVIPDL 222 (364)
Q Consensus 147 naSCTTn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGa-ak---~~~kVlPeL 222 (364)
||||+|+|++++|+||+++|||++++|+|+|++||+|+. +.+ .+.+++|++|+++|+ .| ++.++++++
T Consensus 150 nPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~~l 221 (359)
T 4dpk_A 150 TPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILSEV 221 (359)
T ss_dssp CCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB------GGGTTTCCEECCHHHHHHHHHHHHHHHHTS
T ss_pred CCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999876 222 136899999999876 44 578899988
Q ss_pred CC----------ceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCCC-CCccccccCCceEee-c---C---
Q psy8544 223 EG----------KLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGP-MKGILGYTEDEVVSS-D---F--- 284 (364)
Q Consensus 223 ~g----------ki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~-lkgil~~~e~~~VS~-d---f--- 284 (364)
+| +++++|+|||+++||+++++++++++++.|||+++|+++.+.+ ..++...+| |+|-. + +
T Consensus 222 ~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~-~fV~v~~~~~~P~~ 300 (359)
T 4dpk_A 222 KRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPS-KPIIVMNEDTRPQV 300 (359)
T ss_dssp CCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCS-CSEEECCSTTCCCH
T ss_pred ccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCC-ccEEEcCCCCCCCH
Confidence 76 7999999999999999999999999999999999999987641 122222222 22211 1 0
Q ss_pred ---C-CCC---ceeEEecCCcce-ecCceEEEEEEecCC-CcchhhhhHHHHHHhcc
Q psy8544 285 ---N-GEV---CSSVFDAKAGIA-LNKNFVKLVTWYDNE-YGYSCRVLDLIQYMKSK 332 (364)
Q Consensus 285 ---~-~~~---~s~i~d~~~~~~-~~~~~~kl~~WyDNE-~gys~r~~dl~~~~~~~ 332 (364)
. .+. ..+.+ ++ +. .+.+.+.+++=-||= +|=|-.-|-.|+.|.++
T Consensus 301 ~~~~g~~~~~~~~~~V-gr--~r~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpk_A 301 YFDRWAGDIPGMSVVV-GR--LKQVNKRMIRLVSLIHNTVRGAAGGGILAAELLVEK 354 (359)
T ss_dssp HHHTTCTTTTTCSEEE-EE--EEEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHHT
T ss_pred HHhhccCCCcCCeEEE-EE--EEEcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHHc
Confidence 0 010 11110 00 11 235567777779994 67776666677776654
No 37
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=9.1e-39 Score=316.19 Aligned_cols=302 Identities=14% Similarity=0.173 Sum_probs=210.7
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+| +|.+|+.++|+|.+| .++|+.+......-+.+...+ +|... ..+.-+++.+.+ ++.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~-------p~~~~-----~~~~~~~~~~~v-~~~~ 73 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVV-------RWQTV-----GQVPKEIADMEI-KPTD 73 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHC-------CCCSS-----SCCCHHHHTCBC-EECC
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhc-------ccccc-----cccccccccceE-EeCC
Confidence 47999999 999999999999998 899988853210000011110 00000 000000011122 2223
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC---CCCeEEcccCccccCC--C--------CCeEe
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK---DAPMFVCGVNLDKYDP--S--------HSVVS 146 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~---d~p~vV~gVN~~~~~~--~--------~~IIS 146 (364)
++. | .++|+||+|+|.+.+++.++.|+++|++.|.+|++.. ++|++|||||++.++. . .+|||
T Consensus 74 ~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIa 149 (359)
T 4dpl_A 74 PKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVT 149 (359)
T ss_dssp GGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEE
T ss_pred HHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEE
Confidence 333 3 2899999999999999999999999996555555542 5899999999999853 1 25999
Q ss_pred cCCchhhhHHhHHHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCCh-HH---HHHHHccCC
Q psy8544 147 NASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGA-AK---AVAKVIPDL 222 (364)
Q Consensus 147 naSCTTn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGa-ak---~~~kVlPeL 222 (364)
||||+|+|++++|+||+++|||++++|+|+|++||+|+. +.+ .+.+++|++|+++|+ .| ++.++++++
T Consensus 150 nPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~~l 221 (359)
T 4dpl_A 150 TPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILSEV 221 (359)
T ss_dssp CCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEECCHHHHHHHHHHHHHHHTTS
T ss_pred CCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999865 222 136899999999876 44 578899988
Q ss_pred CC----------ceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCCC-CCccccccCCceEee-cC------
Q psy8544 223 EG----------KLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGP-MKGILGYTEDEVVSS-DF------ 284 (364)
Q Consensus 223 ~g----------ki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~-lkgil~~~e~~~VS~-df------ 284 (364)
+| +++++|+|||+++||+++++++++++++.|||+++|+++.+.+ ..++...+| |+|-. +-
T Consensus 222 ~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~-~fV~v~~~~~~P~~ 300 (359)
T 4dpl_A 222 KRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPS-KPIIVMNEDTRPQV 300 (359)
T ss_dssp CCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCS-CSEEEECSTTCCCH
T ss_pred ccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCC-ccEEEcCCCCCCCH
Confidence 76 7999999999999999999999999999999999999987641 122332222 22211 11
Q ss_pred ---C-CCC---ceeEEecCCcce-ecCceEEEEEEecCC-CcchhhhhHHHHHHhcc
Q psy8544 285 ---N-GEV---CSSVFDAKAGIA-LNKNFVKLVTWYDNE-YGYSCRVLDLIQYMKSK 332 (364)
Q Consensus 285 ---~-~~~---~s~i~d~~~~~~-~~~~~~kl~~WyDNE-~gys~r~~dl~~~~~~~ 332 (364)
. .+. ..+. -++ +. .+.+.+.+++=-||= +|=|-.-|-.|+.|.++
T Consensus 301 ~~~~g~~~~~~~~~~-Vgr--~r~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpl_A 301 YFDRWAGDIPGMSVV-VGR--LKQVNKRMIRLVSLIHNTVRGAAGGGILAAELLVEK 354 (359)
T ss_dssp HHHTTCTTTTTCSEE-EEE--EEEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHHT
T ss_pred HHhhccCCCcCCeEE-EEE--EEEcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHHc
Confidence 0 010 1111 000 11 235567777779994 67776666677776654
No 38
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=1.4e-38 Score=315.71 Aligned_cols=232 Identities=18% Similarity=0.176 Sum_probs=180.5
Q ss_pred ceEEEEc-cChHHHHHHH-HHhcCC---CcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEE-ECCEEEEEEe
Q psy8544 3 YKIGING-FGRIGRLVLR-EALHRN---TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIV-VNGKKIAVFQ 76 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr-~l~~~~---~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~-i~gk~I~v~~ 76 (364)
|||||+| +|.+|+.++| +|++|. ++++.+... | .|+++. +.|+.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~-----------aG~~~~~~~~~~~~~~~ 55 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS--------------Q-----------IGVPAPNFGKDAGMLHD 55 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------S-----------TTSBCCCSSSCCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc--------------c-----------cCcCHHHhCCCceEEEe
Confidence 5999999 9999999999 999985 455444321 1 122211 3343333322
Q ss_pred cCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCccccCCC--C--CeEec
Q psy8544 77 KMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNLDKYDPS--H--SVVSN 147 (364)
Q Consensus 77 ~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~~~~~~~--~--~IISn 147 (364)
..+++. | .++|+||+|+|.+.++++++.|+++|+|++|||+|++ |+|++|||||++.++.. + ++|||
T Consensus 56 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 131 (370)
T 3pzr_A 56 AFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVG 131 (370)
T ss_dssp TTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEc
Confidence 112222 3 3899999999999999999999999999899999985 47999999999998642 3 45999
Q ss_pred CCchhhhHHhHHHHHhhhcCeeEEEEEeeeccccchhh-hc------------------CC------------------C
Q psy8544 148 ASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQKT-VD------------------AP------------------S 190 (364)
Q Consensus 148 aSCTTn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~-~D------------------~~------------------~ 190 (364)
|||||+|++|+|+||+++|||+++.|||+|++||+++- ++ .| .
T Consensus 132 p~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~~ 211 (370)
T 3pzr_A 132 GNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSGS 211 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSTT
T ss_pred CChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999998642 10 01 0
Q ss_pred cccccccccccceeecCCC-----ChHHH-------HHHHccC--CCCceeeEEEeceeccceEEEEEEEeccCCCHHHH
Q psy8544 191 KKMWRDGRGANQNIIPAST-----GAAKA-------VAKVIPD--LEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEI 256 (364)
Q Consensus 191 ~~d~r~~r~~a~NIIP~~t-----Gaak~-------~~kVlPe--L~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei 256 (364)
...-.+++++++|++|++. |++++ ++|++.. -..++++||+|||+++||+..++++|+++++.+|+
T Consensus 212 ~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~~~~~ei 291 (370)
T 3pzr_A 212 FPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDEI 291 (370)
T ss_dssp SCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSCCCHHHH
T ss_pred cccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHHH
Confidence 0123567789999999974 44544 3556653 24579999999999999999999999999999999
Q ss_pred HHHHHHc
Q psy8544 257 KAKVKAA 263 (364)
Q Consensus 257 ~~~l~~a 263 (364)
+++|+++
T Consensus 292 ~~~l~~~ 298 (370)
T 3pzr_A 292 EEMIATH 298 (370)
T ss_dssp HHHHHTS
T ss_pred HHHHHhC
Confidence 9999998
No 39
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=1.1e-38 Score=317.21 Aligned_cols=290 Identities=16% Similarity=0.200 Sum_probs=205.1
Q ss_pred CceEEEEc-cChHHHHHHH-HHhcCC---CcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEE-ECCEEEEEE
Q psy8544 2 AYKIGING-FGRIGRLVLR-EALHRN---TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIV-VNGKKIAVF 75 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr-~l~~~~---~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~-i~gk~I~v~ 75 (364)
++||||+| +|.+|+.++| +|++|. ++++.+... | .|+.+. +.|+.+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~-----------aG~~~~~~~~~~~~v~ 58 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS--------------N-----------AGGKAPSFAKNETTLK 58 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------C-----------TTSBCCTTCCSCCBCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech--------------h-----------cCCCHHHcCCCceEEE
Confidence 47999999 9999999999 999985 455444221 1 122211 333333332
Q ss_pred ecCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCccccCCC--CC--eEe
Q psy8544 76 QKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNLDKYDPS--HS--VVS 146 (364)
Q Consensus 76 ~~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~~~~~~~--~~--IIS 146 (364)
...+++. |. ++|+||+|+|.+.++++++.|+++|+|++|||+|++ |+|++|||||++.++.. ++ +||
T Consensus 59 ~~~~~~~--~~--~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 134 (377)
T 3uw3_A 59 DATSIDD--LK--KCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFI 134 (377)
T ss_dssp ETTCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCChhH--hc--CCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEE
Confidence 2112222 43 899999999999999999999999998899999985 47999999999998642 33 599
Q ss_pred cCCchhhhHHhHHHHHhhhcCeeEEEEEeeeccccchhh-h-----------cC-------C------------------
Q psy8544 147 NASCTTNCLAPLAKVIHDNFEILEGLMTTVHAVTATQKT-V-----------DA-------P------------------ 189 (364)
Q Consensus 147 naSCTTn~Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~-~-----------D~-------~------------------ 189 (364)
||||||+|++|+|+||+++|||++++|||+|++||+++- + ++ |
T Consensus 135 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~~ 214 (377)
T 3uw3_A 135 GGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNGD 214 (377)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHST
T ss_pred cCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhcccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999998642 1 10 1
Q ss_pred CcccccccccccceeecCCC-----ChHHH-------HHHHccCC------CCceeeEEEeceeccceEEEEEEEeccCC
Q psy8544 190 SKKMWRDGRGANQNIIPAST-----GAAKA-------VAKVIPDL------EGKLTGMAFRVPVPNVSVVDLTVRLCCDV 251 (364)
Q Consensus 190 ~~~d~r~~r~~a~NIIP~~t-----Gaak~-------~~kVlPeL------~gki~~~avRVPv~~gs~~dl~~~l~k~~ 251 (364)
....-.+++++++|++|++. |++++ ++|++..+ ..++++||+|||+++||+..++++|++++
T Consensus 215 ~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~~ 294 (377)
T 3uw3_A 215 AMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKDV 294 (377)
T ss_dssp TSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSCC
T ss_pred ccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCCC
Confidence 01123567789999999973 55554 45666654 45799999999999999999999999999
Q ss_pred CHHHHHHHHHHccCCCCCcccc--------ccCCceEeecCCCCCceeEEecCCccee---cCceEEEEEEecC-CCcch
Q psy8544 252 TYDEIKAKVKAASQGPMKGILG--------YTEDEVVSSDFNGEVCSSVFDAKAGIAL---NKNFVKLVTWYDN-EYGYS 319 (364)
Q Consensus 252 s~eei~~~l~~a~~~~lkgil~--------~~e~~~VS~df~~~~~s~i~d~~~~~~~---~~~~~kl~~WyDN-E~gys 319 (364)
+.+|++++|+++. |+--++. |+ .|. +..|.-+..| ++ +.. .++.+.+++==|| -||=|
T Consensus 295 ~~eei~~~l~~~~--p~V~v~~~~~~~~~~~P-~p~---~v~G~n~v~V--Gr--ir~d~~~~~~l~~~~v~DNL~KGAA 364 (377)
T 3uw3_A 295 PLDEINGILASAN--DWVKVVPNEREASMRDL-SPA---KVTGTLSVPV--GR--LRKLAMGGEYLSAFTVGDQLLWGAA 364 (377)
T ss_dssp CHHHHHHHHHTSC--SSEEECCSSHHHHHHHS-SHH---HHTTSSCEEE--EE--EEECTTCTTEEEEEEEEETTCCCCC
T ss_pred CHHHHHHHHHhCC--CCEEEecCCcccccCCC-CHH---HhcCCCcEEE--EE--EEECCCCCCEEEEEEEehhhhHhHH
Confidence 9999999999982 2211111 11 111 2233222211 00 111 1344556555788 46777
Q ss_pred hhhhHHHHHHh
Q psy8544 320 CRVLDLIQYMK 330 (364)
Q Consensus 320 ~r~~dl~~~~~ 330 (364)
-+.+-.|+.|.
T Consensus 365 gqAvqn~nl~~ 375 (377)
T 3uw3_A 365 EPLRRMLRILL 375 (377)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 77777776664
No 40
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=6.5e-37 Score=301.24 Aligned_cols=293 Identities=19% Similarity=0.283 Sum_probs=209.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
+||||+| +|.+|+.++|+|.+|+|+.+-+.- + .| -+..|..+.+.|+.+.+. +.+++
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~-----------~--~s--------~~~aG~~~~~~~~~~~~~-~~~~~ 59 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRF-----------F--AS--------ARSQGRKLAFRGQEIEVE-DAETA 59 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEE-----------E--EC--------TTTSSCEEEETTEEEEEE-ETTTS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEE-----------E--EC--------cccCCCceeecCCceEEE-eCCHH
Confidence 6999999 999999999999998777643321 1 11 134567777888877763 33443
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCc-cccCCC-CCeEecCCchhhh
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNL-DKYDPS-HSVVSNASCTTNC 154 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~-~~~~~~-~~IISnaSCTTn~ 154 (364)
. |. ++|+||+|+|.+.+++.++.|+++|+ +||+++++ |+|++|||||+ +.++.. ++|||||||+|+|
T Consensus 60 ~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~tt~ 133 (344)
T 3tz6_A 60 D--PS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTMA 133 (344)
T ss_dssp C--CT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHHHHH
T ss_pred H--hc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcHHHH
Confidence 3 43 89999999999999999999999999 67777763 57999999999 999754 6899999999999
Q ss_pred HHhHHHHHhhhcCeeEEEEEeeeccccchhh-h-------------------cCCCc---ccccccccccceeecCC---
Q psy8544 155 LAPLAKVIHDNFEILEGLMTTVHAVTATQKT-V-------------------DAPSK---KMWRDGRGANQNIIPAS--- 208 (364)
Q Consensus 155 Lap~lk~L~d~fGI~~~~~TTvha~t~~q~~-~-------------------D~~~~---~d~r~~r~~a~NIIP~~--- 208 (364)
++|+|+||+++|||+++.|||+|++||+++- + ++... +..++++..++|++|++
T Consensus 134 ~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i~~~ 213 (344)
T 3tz6_A 134 AMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSL 213 (344)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCCSCB
T ss_pred HHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhcccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999998652 2 11110 11255677999999985
Q ss_pred --CCh--HHHH-------HHHccCCCCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCCCCCccccccCC
Q psy8544 209 --TGA--AKAV-------AKVIPDLEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQGPMKGILGYTED 277 (364)
Q Consensus 209 --tGa--ak~~-------~kVlPeL~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~~lkgil~~~e~ 277 (364)
+|. ++++ +|++..-..+++.+|+|||+++||++.++++++++++.+|++++|++++- --++.|+.
T Consensus 214 ~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~~s~eei~~~l~~~p~---V~v~~~P~- 289 (344)
T 3tz6_A 214 VDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGATG---VQLVDVPT- 289 (344)
T ss_dssp CSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHHHHHHHHHCTT---EEECSSCC-
T ss_pred ccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCCCCHHHHHHHHhcCCC---eEEECCCC-
Confidence 244 4443 35653223479999999999999999999999999999999999997642 22222221
Q ss_pred ceEeecCCCCCceeEEecCCccee-cCceEEEEEEecCC-CcchhhhhHHHHHHh
Q psy8544 278 EVVSSDFNGEVCSSVFDAKAGIAL-NKNFVKLVTWYDNE-YGYSCRVLDLIQYMK 330 (364)
Q Consensus 278 ~~VS~df~~~~~s~i~d~~~~~~~-~~~~~kl~~WyDNE-~gys~r~~dl~~~~~ 330 (364)
|. +..|.-+..|-=.+..... +++.+.+++=-||= +|=|-.-|-.|+.|.
T Consensus 290 p~---~v~gtn~~~Vgrir~d~~~~~~~~l~~~~~~DNL~KGAAg~AVQ~anll~ 341 (344)
T 3tz6_A 290 PL---AAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLT 341 (344)
T ss_dssp HH---HHTTCSSEEEEEEEECTTSGGGCEEEEEEEECTTTTTTHHHHHHHHHHHT
T ss_pred hH---HhCCCceEEEEEEEecCCCCCCCEEEEEEEEcchhHhHHHHHHHHHHHHH
Confidence 11 2233322222100000000 12256777778983 566666565566554
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=1.8e-35 Score=294.55 Aligned_cols=239 Identities=18% Similarity=0.279 Sum_probs=178.6
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCC--CCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDPH--LSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~--~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
++||||+| +|.+|+.++|+|.+| .++|+.+-... ..-. + ...| +|.. +..|..+.+.+.+ ++
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~-~------~~~~-~~~~-----~~~~p~~~~~~~v-~~ 84 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKK-Y------KDAA-SWKQ-----TETLPETEQDIVV-QE 84 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB-H------HHHC-CCCC-----SSCCCHHHHTCBC-EE
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCC-H------HHhc-cccc-----ccccccccccceE-Ee
Confidence 57999999 999999999999999 89998774221 0000 0 0001 1110 0000001111222 22
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-----CCCeEEcccCccccC-------------
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-----DAPMFVCGVNLDKYD------------- 139 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-----d~p~vV~gVN~~~~~------------- 139 (364)
.++.+ .|. ++|+||+|+|.+.+++.++.++++|+ +||+++++ |+|++|++||++.|.
T Consensus 85 ~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~--~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~~~ 159 (381)
T 3hsk_A 85 CKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGL--AVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVSKG 159 (381)
T ss_dssp SSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHHTT
T ss_pred Cchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCC--EEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcccc
Confidence 23321 343 79999999999999999999999999 56666653 579999999999885
Q ss_pred --CCCCeEecCCchhhhHHhHHHHHhhhcC-eeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCCh-HH--
Q psy8544 140 --PSHSVVSNASCTTNCLAPLAKVIHDNFE-ILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGA-AK-- 213 (364)
Q Consensus 140 --~~~~IISnaSCTTn~Lap~lk~L~d~fG-I~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGa-ak-- 213 (364)
...+||+||+|+|+|++++|+||+++|| |+++.|+|+|++||+|+... .+ .+.+++|++|++++. .|
T Consensus 160 ~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~----~~---~~~~~~N~~Py~~~~e~k~~ 232 (381)
T 3hsk_A 160 GKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPG----VS---GMDILDNIVPYISGEEDKLE 232 (381)
T ss_dssp CCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC----------CC---HHHHTTCCBCCCTTHHHHHH
T ss_pred cccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCC----cc---hhhhhcChhhcccchHHHHH
Confidence 2356999999999999999999999999 99999999999999986321 11 236899999999887 33
Q ss_pred -HHHHHccCCCC-------------ceeeEEEeceeccceEEEEEEEecc--CCCHHHHHHHHHHccCC
Q psy8544 214 -AVAKVIPDLEG-------------KLTGMAFRVPVPNVSVVDLTVRLCC--DVTYDEIKAKVKAASQG 266 (364)
Q Consensus 214 -~~~kVlPeL~g-------------ki~~~avRVPv~~gs~~dl~~~l~k--~~s~eei~~~l~~a~~~ 266 (364)
|+.|+++.+++ +++++|+|||+++||++++++++++ +++.||++++|+++..+
T Consensus 233 ~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~~t~eei~~~l~~~y~~ 301 (381)
T 3hsk_A 233 WETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLREYECA 301 (381)
T ss_dssp HHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSCCCHHHHHHHHHHCBCH
T ss_pred HHHHHHhhhcccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCCCCHHHHHHHHHHhhcc
Confidence 56788887665 7999999999999999999999999 99999999999998753
No 42
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=1.6e-35 Score=290.60 Aligned_cols=290 Identities=13% Similarity=0.132 Sum_probs=204.9
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCE-EEEEEecC-
Q psy8544 3 YKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGK-KIAVFQKM- 78 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk-~I~v~~~~- 78 (364)
+||||.| +|.+|+.++|+|.++ +++++++.... +.++ .--++...|..| .|. .+.+ ++.
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~-~~~s--aGk~~~~~~p~~-------------~~~~~~~v-~~~~ 67 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA-QSND--AGKLISDLHPQL-------------KGIVELPL-QPMS 67 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET-TCTT--TTSBHHHHCGGG-------------TTTCCCBE-EEES
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC-chhh--cCCchHHhCccc-------------cCccceeE-eccC
Confidence 7999999 999999999999998 89998874321 0000 000000111111 111 1222 111
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC--CC--CC------------------eEEcccCcc
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS--KD--AP------------------MFVCGVNLD 136 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps--~d--~p------------------~vV~gVN~~ 136 (364)
++++ |. .++|+||+|+|.+.+++.++.|+++|++.|.+|++. +| +| ..+||+|++
T Consensus 68 ~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~ 144 (337)
T 3dr3_A 68 DISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGN 144 (337)
T ss_dssp SGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCH
T ss_pred CHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHH
Confidence 3333 31 279999999999999999999999999544444443 12 22 246777999
Q ss_pred ccCCCCCeEecCCchhhhHHhHHHHHhh--hcCeeEE-EEEeeeccccchh-hhcCCCcccccccccccceeecCCCChH
Q psy8544 137 KYDPSHSVVSNASCTTNCLAPLAKVIHD--NFEILEG-LMTTVHAVTATQK-TVDAPSKKMWRDGRGANQNIIPASTGAA 212 (364)
Q Consensus 137 ~~~~~~~IISnaSCTTn~Lap~lk~L~d--~fGI~~~-~~TTvha~t~~q~-~~D~~~~~d~r~~r~~a~NIIP~~tGaa 212 (364)
.++ ..+|||||||+|+|++++|+||++ .|+++++ .|+|+|++||+|+ ..|+.+ .+++ |++|+.++.
T Consensus 145 ~i~-~~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~-~~~~-------n~~py~~~~- 214 (337)
T 3dr3_A 145 KLK-EANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS-FCEV-------SLQPYGVFT- 214 (337)
T ss_dssp HHH-TCSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTS-GGGC-------SEEECSTTT-
T ss_pred HhC-CCCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccc-cccc-------ceEccCccc-
Confidence 997 468999999999999999999999 6999999 9999999999974 555444 3332 999998886
Q ss_pred HHHHHHccCCCC----ceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHc-cCCCCCccccccCCceEeecCCCC
Q psy8544 213 KAVAKVIPDLEG----KLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAA-SQGPMKGILGYTEDEVVSSDFNGE 287 (364)
Q Consensus 213 k~~~kVlPeL~g----ki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a-~~~~lkgil~~~e~~~VS~df~~~ 287 (364)
.+.+||+.+ +++++++|||+++||+++++++++++++.+||+++|+++ ...|+--++.-.+ |.. .+..|.
T Consensus 215 ---h~h~Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~~t~eev~~~l~~~Y~~~p~V~v~~~~~-P~~-~~v~gt 289 (337)
T 3dr3_A 215 ---HRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKGV-PAL-KNVVGL 289 (337)
T ss_dssp ---CTHHHHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECSSSC-CCG-GGTTTS
T ss_pred ---ceechhHHhhhcCCEEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHHhCCCCCEEECCCCC-CCH-HHhCCC
Confidence 446777665 899999999999999999999999999999999999986 3334433332111 321 244554
Q ss_pred CceeEEecCCcceecCceEEEEEEecC-CCcchhhhhHHHHHHhcc
Q psy8544 288 VCSSVFDAKAGIALNKNFVKLVTWYDN-EYGYSCRVLDLIQYMKSK 332 (364)
Q Consensus 288 ~~s~i~d~~~~~~~~~~~~kl~~WyDN-E~gys~r~~dl~~~~~~~ 332 (364)
.+-.|- ...+++.+.+++..|| -+|=|-+-|-.|+.|-..
T Consensus 290 n~~~ig-----~~~~~~~l~~~~~~DNL~KGAAgqAVQ~~nlm~g~ 330 (337)
T 3dr3_A 290 PFCDIG-----FAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGY 330 (337)
T ss_dssp SCEEEE-----EEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHTC
T ss_pred CcEEEE-----EEEeCCEEEEEEEechHHHHHHHHHHHHHHHHhCC
Confidence 433321 1122566788888999 678888888888888764
No 43
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=1.1e-32 Score=271.98 Aligned_cols=298 Identities=12% Similarity=0.064 Sum_probs=211.4
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCC------CcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEE
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRN------TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAV 74 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~------~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v 74 (364)
++||+|+| +|+||+.++|.|.++. +++++++... +.. -++++.|++|.+.. .+ .+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-~ag-----k~~~~~~~~l~~~~-----~~-------~~ 70 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-SAG-----STLGEHHPHLTPLA-----HR-------VV 70 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-CTT-----SBGGGTCTTCGGGT-----TC-------BC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-cCC-----Cchhhhcccccccc-----ee-------ee
Confidence 47999999 9999999999999875 6899987531 111 12466777665320 11 11
Q ss_pred EecCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC--C-C--------------CeEEccc--Cc
Q psy8544 75 FQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK--D-A--------------PMFVCGV--NL 135 (364)
Q Consensus 75 ~~~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~--d-~--------------p~vV~gV--N~ 135 (364)
.+.+++ .|. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. | . |+.+||+ |+
T Consensus 71 -~~~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~ 144 (352)
T 2nqt_A 71 -EPTEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGAR 144 (352)
T ss_dssp -EECCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHH
T ss_pred -ccCCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCH
Confidence 112222 254 799999999999999999999 99985555555542 2 2 8889999 99
Q ss_pred cccCCCCCeEecCCchhhhHHhHHHHHhhhcCee-EEEEEeeeccccc-hhhhcCCCcccccccccccceeec-CCC-C-
Q psy8544 136 DKYDPSHSVVSNASCTTNCLAPLAKVIHDNFEIL-EGLMTTVHAVTAT-QKTVDAPSKKMWRDGRGANQNIIP-AST-G- 210 (364)
Q Consensus 136 ~~~~~~~~IISnaSCTTn~Lap~lk~L~d~fGI~-~~~~TTvha~t~~-q~~~D~~~~~d~r~~r~~a~NIIP-~~t-G- 210 (364)
+.++ ..+|||||+|+|+|++++|+||+++|+|+ +++|+|+|++||+ ++..++.+ .++++.+..++|++| +.. .
T Consensus 145 ~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~-~~~~~~~~~ay~~~~~h~h~pE 222 (352)
T 2nqt_A 145 DQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLL-GAEVIGSARAYNIAGVHRHTPE 222 (352)
T ss_dssp HHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGS-HHHHTTCCEECSTTTTSTTHHH
T ss_pred HHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccccc-HHHHhhhcccccCCCcceecHH
Confidence 9998 46899999999999999999999999999 9999999999999 55666554 567777778899988 421 1
Q ss_pred hHHHHHHHccCCCCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccC-CCCCccccccCCceEeecCCCCCc
Q psy8544 211 AAKAVAKVIPDLEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQ-GPMKGILGYTEDEVVSSDFNGEVC 289 (364)
Q Consensus 211 aak~~~kVlPeL~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~-~~lkgil~~~e~~~VS~df~~~~~ 289 (364)
-..+++|++. .+.+++++++|||+++||+++++++++++ .|||+++++++-+ .|+--++.-.+-|-. .+..|..+
T Consensus 223 i~~e~~ki~~-~~~~v~ft~~rvP~~rG~~~ti~~~l~~~--~~ei~~~~~~~y~~~~~V~v~~~~~~p~~-~~v~g~n~ 298 (352)
T 2nqt_A 223 IAQGLRAVTD-RDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYEKAYHAEPFIYLMPEGQLPRT-GAVIGSNA 298 (352)
T ss_dssp HHHHHHTTCS-SCCEEEEEEEECSCSSCEEEEEEEECCSC--HHHHHHHHHHHHTTCTTEEECCTTCCCCG-GGTTTSSC
T ss_pred HHHHHHHHhC-CCCCEEEEEEEEccccEEEEEEEEEECCC--HHHHHHHHHHhhCCCCCEEEeCCCCCcCh-HHhcCCcE
Confidence 1123456665 36789999999999999999999999988 9999999998632 232222211111111 13344333
Q ss_pred eeEEecCCccee--cCceEEEEEEecCC-CcchhhhhHHHHHHhccCC
Q psy8544 290 SSVFDAKAGIAL--NKNFVKLVTWYDNE-YGYSCRVLDLIQYMKSKDT 334 (364)
Q Consensus 290 s~i~d~~~~~~~--~~~~~kl~~WyDNE-~gys~r~~dl~~~~~~~~~ 334 (364)
-.| + ... ..+.+.+++=-||= +|=|-+-|-.|+.|...+-
T Consensus 299 ~~i---g--~~~d~~~~~l~~~~~~DNL~KGAAg~AVQ~~nl~~g~~e 341 (352)
T 2nqt_A 299 AHI---A--VAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPE 341 (352)
T ss_dssp EEE---E--EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHHTCCT
T ss_pred EEE---E--EEEeCCCCEEEEEEEEcchhHhHHHHHHHHHHHHhCCCc
Confidence 332 1 112 23456676668994 6777777777888876543
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.96 E-value=3.2e-29 Score=246.93 Aligned_cols=288 Identities=14% Similarity=0.111 Sum_probs=198.8
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+| +|.+|+.++|+|.+| .++|+.+.... +. -.+|+++|..|. +.+.+ ++.+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~-~a-----G~~~~~~~p~~~--------------~~l~~-~~~~ 71 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT-YA-----GKKLEEIFPSTL--------------ENSIL-SEFD 71 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST-TT-----TSBHHHHCGGGC--------------CCCBC-BCCC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc-cc-----cCChHHhChhhc--------------cCceE-EeCC
Confidence 48999999 999999999999999 89999887531 11 112333343332 11222 1222
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC---CC--------------------CeEEcccCcc
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK---DA--------------------PMFVCGVNLD 136 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~---d~--------------------p~vV~gVN~~ 136 (364)
++++ |. ++|+||+|+|...+++.++.+ +|+ +|||++++ +. |..+||+|.+
T Consensus 72 ~~~~-~~--~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~e 144 (351)
T 1vkn_A 72 PEKV-SK--NCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHRE 144 (351)
T ss_dssp HHHH-HH--HCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHHH
T ss_pred HHHh-hc--CCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCHH
Confidence 3222 22 699999999999999999877 677 79999985 22 7888999999
Q ss_pred ccCCCCCeEecCCchhhhHHhHHHHHhhhcCee--EEEEEeeeccccchhh-hcCCCcccccccccccceeecCCCChH-
Q psy8544 137 KYDPSHSVVSNASCTTNCLAPLAKVIHDNFEIL--EGLMTTVHAVTATQKT-VDAPSKKMWRDGRGANQNIIPASTGAA- 212 (364)
Q Consensus 137 ~~~~~~~IISnaSCTTn~Lap~lk~L~d~fGI~--~~~~TTvha~t~~q~~-~D~~~~~d~r~~r~~a~NIIP~~tGaa- 212 (364)
.+.. .+||+||+|+|++++++|+||+++++|+ ++.++|+|++||+++- .+..+ ...+..|+.|+..+..
T Consensus 145 ~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~------~~e~~~n~~~y~~~~h~ 217 (351)
T 1vkn_A 145 EIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYL------FSEVNESLRPYNVAKHR 217 (351)
T ss_dssp HHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGB------HHHHTTCCEECSCSCCT
T ss_pred Hhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccc------hhHHhcccccCCccccc
Confidence 9974 5899999999999999999999999999 9999999999999863 33221 1134567778765532
Q ss_pred ------HHHHHHccCCCCceeeEEEeceeccceEEEEEEEeccCCCHHHHHHHHHHccCC-CCCccccccCCceEeecCC
Q psy8544 213 ------KAVAKVIPDLEGKLTGMAFRVPVPNVSVVDLTVRLCCDVTYDEIKAKVKAASQG-PMKGILGYTEDEVVSSDFN 285 (364)
Q Consensus 213 ------k~~~kVlPeL~gki~~~avRVPv~~gs~~dl~~~l~k~~s~eei~~~l~~a~~~-~lkgil~~~e~~~VS~df~ 285 (364)
+++++++.+ ..+++.+|+|||+++||+++++++++ ++.+|++++++++-++ |+--++.-.+-|-.- +-.
T Consensus 218 h~pEi~~el~~i~~~-~~~v~ftp~rvPv~rG~~~tv~v~l~--~~~eei~~~l~~~Y~~~pfV~v~~~~~~P~~~-~v~ 293 (351)
T 1vkn_A 218 HVPEMEQELGKISGK-KVNVVFTPHLVPMTRGILSTIYVKTD--KSLEEIHEAYLEFYKNEPFVHVLPMGIYPSTK-WCY 293 (351)
T ss_dssp HHHHHHHHHHHHHTS-CCEEEEEEEEESSSSCEEEEEEEECS--SCHHHHHHHHHHHHTTCTTEEECCTTCCCCGG-GGT
T ss_pred cHHHHHHHHHHhhCC-CCCEEEEEEEeccccEEEEEEEEEEc--CCHHHHHHHHHHhhCCCCCEEEeCCCCCcChH-Hhc
Confidence 344555542 35799999999999999999999998 8999999999974322 322222111111111 223
Q ss_pred CCCceeEEecCCcceec--CceEEEEEEecCC-CcchhhhhHHHHHHhccC
Q psy8544 286 GEVCSSVFDAKAGIALN--KNFVKLVTWYDNE-YGYSCRVLDLIQYMKSKD 333 (364)
Q Consensus 286 ~~~~s~i~d~~~~~~~~--~~~~kl~~WyDNE-~gys~r~~dl~~~~~~~~ 333 (364)
|..+-.| + ...+ .+.+.+++=-||= +|=|-+-|-.|+.|...+
T Consensus 294 gtn~~~I---g--~~~d~~~~~l~~~s~~DNL~KGAAgqAVQn~nlm~G~~ 339 (351)
T 1vkn_A 294 GSNHVFI---G--MQMEERTNTLILMSAIDNLVKGASGQAVQNMNIMFGLD 339 (351)
T ss_dssp TSSCEEE---E--EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHTTCC
T ss_pred CCceEEE---E--EEEcCCCCEEEEEEEcccHHHhHHHHHHHHHHHHhCCC
Confidence 3322222 1 1111 2445555558994 577777777788887653
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.71 E-value=4.7e-08 Score=94.54 Aligned_cols=149 Identities=15% Similarity=0.191 Sum_probs=96.1
Q ss_pred CceEEEEccChHHHHHHHHHhc-C-CCcEEEEeCCCCCHHH--HHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 2 AYKIGINGFGRIGRLVLREALH-R-NTPVVGINDPHLSVDY--LAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~-~-~~~ivaInd~~~~~~~--~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
++||||+|+|.||+.+++.+.+ + +++++++.|. +++. ....-+| |. .. +.. ..
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~--~~~~~~~~~a~~~----g~---~~--------~~~------~~ 60 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGI--DAASDGLARAQRM----GV---TT--------TYA------GV 60 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECS--CTTCHHHHHHHHT----TC---CE--------ESS------HH
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeC--ChhhhHHHHHHHc----CC---Cc--------ccC------CH
Confidence 5899999999999999999976 5 8999999986 3332 1111111 11 00 000 00
Q ss_pred CCC-CCCCCcCCCccEEEeecCCCCCHhhHHHHHhC--CCCEEEEeC-CCCCCCeEEcccCccccCC--CCCeEecCCch
Q psy8544 78 MKP-EEIPWSQTGAEYIVESTGVFKTKDTASAHLKG--GAKKVIITA-PSKDAPMFVCGVNLDKYDP--SHSVVSNASCT 151 (364)
Q Consensus 78 ~~p-~~~~w~~~gvDiV~estG~f~s~e~a~~hl~a--GakkVIIsa-ps~d~p~vV~gVN~~~~~~--~~~IISnaSCT 151 (364)
.+. ++.+| .++|+||+|||.....+.+...+++ |. .||+. |..-.|..++++|.+.+.. ..++++++.|.
T Consensus 61 e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~g~~ 136 (312)
T 1nvm_B 61 EGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGGQA 136 (312)
T ss_dssp HHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHHHHH
T ss_pred HHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCcccccccccCccCHHHHHhccCCcEEEeCCcc
Confidence 000 11112 2699999999988888999999988 87 45554 4333577888889887642 23577777775
Q ss_pred hhhHHhHHHHHhhhcCeeEE-EEEeeeccc
Q psy8544 152 TNCLAPLAKVIHDNFEILEG-LMTTVHAVT 180 (364)
Q Consensus 152 Tn~Lap~lk~L~d~fGI~~~-~~TTvha~t 180 (364)
+ .|++..+.+.|..... .+.++++.+
T Consensus 137 ~---ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 137 T---IPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp H---HHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred c---chHHHHhhhhccchhHhHhhhhhccc
Confidence 4 4666666666665432 567787766
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.71 E-value=6.2e-05 Score=72.46 Aligned_cols=88 Identities=15% Similarity=0.185 Sum_probs=63.7
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|++|+.+++.+.++ +++++++.|.. ++. ++. -| +.++ .+.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~--~~~------------~~~------------~g--v~~~--~d~ 52 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR--ATL------------DTK------------TP--VFDV--ADV 52 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESS--SCC------------SSS------------SC--EEEG--GGG
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCC--HHH------------hhc------------CC--Ccee--CCH
Confidence 58999999999999999999887 89999998861 110 000 11 2222 233
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+.+- .++|+|++||+.....+.+..++++|. .||++.|.
T Consensus 53 ~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 53 DKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp GGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred HHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 4432 379999999999888888889998886 57776664
No 47
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.51 E-value=0.00014 Score=70.04 Aligned_cols=96 Identities=22% Similarity=0.340 Sum_probs=67.1
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
|++||||+|+|.||+..++.|.+. ++++++|.|. +++....+.+ .+|. . .++ .+
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~---~---------------~~~--~~ 55 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAISDV--REDRLREMKE---KLGV---E---------------KAY--KD 55 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHHH---HHTC---S---------------EEE--SS
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HhCC---C---------------cee--CC
Confidence 789999999999999999999877 8999999986 6665433321 1110 0 011 12
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++ ..+..+|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 56 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 97 (344)
T 3ezy_A 56 PHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKPL 97 (344)
T ss_dssp HHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred HHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECCC
Confidence 2221 11236899999999998888899999998 467777664
No 48
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.50 E-value=0.00015 Score=69.36 Aligned_cols=94 Identities=18% Similarity=0.240 Sum_probs=66.9
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
|++||||+|+|.+|+..++.+.+. ++++++|.|. +++....+.+. +|. . + .+
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~~---~~~-------------------~-~--~~ 54 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAGA---YGC-------------------E-V--RT 54 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHHH---TTC-------------------E-E--CC
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHHH---hCC-------------------C-c--CC
Confidence 779999999999999999999887 8999999986 66654333220 110 0 0 11
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++ ..+.++|+|+-||......+.+...+++| |.|++--|.
T Consensus 55 ~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 96 (331)
T 4hkt_A 55 IDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKPI 96 (331)
T ss_dssp HHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred HHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecCC
Confidence 1111 11226899999999999899999999998 567776664
No 49
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.46 E-value=0.00017 Score=69.44 Aligned_cols=97 Identities=14% Similarity=0.248 Sum_probs=67.8
Q ss_pred CCceEEEEccChHHHHHHHHHh-cC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 1 MAYKIGINGFGRIGRLVLREAL-HR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~-~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
|++||||+|+|.||+..++.+. .. ++++++|.|. +++....+.+ .||. .+ .++ .
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~~---~~g~---~~--------------~~~--~ 56 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVVE---QYQL---NA--------------TVY--P 56 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHHH---HTTC---CC--------------EEE--S
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCC---CC--------------eee--C
Confidence 7899999999999999999998 55 8999999986 6654433321 1110 00 111 1
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+.+++- .+..+|+|+-||......+.+...+++| |.|++--|.
T Consensus 57 ~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP~ 99 (344)
T 3mz0_A 57 NDDSLL-ADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKPL 99 (344)
T ss_dssp SHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CHHHHh-cCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCCC
Confidence 222210 1236899999999999999999999999 467776664
No 50
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.44 E-value=0.00019 Score=68.59 Aligned_cols=88 Identities=18% Similarity=0.230 Sum_probs=59.6
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|+||+.+++.+.++ ++++++|.|. +++.... +|. ....+ .+.
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~--~~~~~~~-------~g~-----------------~~~~~--~~l 60 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR--NPAEVPF-------ELQ-----------------PFRVV--SDI 60 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------CCT-----------------TSCEE--SSG
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHH-------cCC-----------------CcCCH--HHH
Confidence 48999999999999999999876 8999999886 4442210 110 00011 222
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsap 122 (364)
.+. .++|+|+.||+.....+.+...+++|. .|+...|
T Consensus 61 ~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ekP 97 (304)
T 3bio_A 61 EQL----ESVDVALVCSPSREVERTALEILKKGI-CTADSFD 97 (304)
T ss_dssp GGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEECCC
T ss_pred HhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEECCC
Confidence 222 279999999999998999999999886 4454434
No 51
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.40 E-value=0.00019 Score=69.73 Aligned_cols=93 Identities=23% Similarity=0.304 Sum_probs=65.9
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|.||+..++.+.+. ++++++|.|. +++.....-+| |. + ++ .+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~a~~~----g~-----~--------------~~--~~~ 57 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI--LAEKREAAAQK----GL-----K--------------IY--ESY 57 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS--SHHHHHHHHTT----TC-----C--------------BC--SCH
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHhc----CC-----c--------------ee--CCH
Confidence 37999999999999999998877 8999999986 66654322111 10 0 00 111
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++ ..+.++|+|+-||....-.+.+..++++| |.|++--|.
T Consensus 58 ~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP~ 98 (359)
T 3e18_A 58 EAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKPV 98 (359)
T ss_dssp HHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred HHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCCC
Confidence 111 11236899999999999999999999998 467776664
No 52
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.36 E-value=0.00038 Score=67.26 Aligned_cols=96 Identities=26% Similarity=0.299 Sum_probs=64.8
Q ss_pred CCceEEEEccChHHH-HHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 1 MAYKIGINGFGRIGR-LVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 1 m~irVaInG~G~IGr-~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
|++||||+|+|.+|+ ..++++.+. +++|++|.|.. ..+.++..+ +.. + +.++ .
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~------~~~--------------~--~~~~--~ 55 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPF------KEK--------------G--VNFT--A 55 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHH------HTT--------------T--CEEE--S
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhh------CCC--------------C--CeEE--C
Confidence 889999999999998 677777766 89999999862 122221111 100 0 0111 2
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 56 ~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (349)
T 3i23_A 56 DLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKPF 98 (349)
T ss_dssp CTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECCC
Confidence 233221 2236999999999998899999999999 567775553
No 53
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.30 E-value=0.00063 Score=65.98 Aligned_cols=91 Identities=20% Similarity=0.228 Sum_probs=64.8
Q ss_pred ceEEEEccChHHHH-HHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGINGFGRIGRL-VLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaInG~G~IGr~-vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
+||||+|+|.||+. .++++... +++|++|.|. +++..+.. |. + + .++ .+.
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~--~~-------~-~--------------~~~--~~~ 57 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKRD--FP-------D-A--------------EVV--HEL 57 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHHH--CT-------T-S--------------EEE--SST
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHhh--CC-------C-C--------------ceE--CCH
Confidence 79999999999996 67877766 8999999997 56543221 11 0 0 111 222
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|-
T Consensus 58 ~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 98 (358)
T 3gdo_A 58 EEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKPM 98 (358)
T ss_dssp HHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESSC
T ss_pred HHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecCC
Confidence 222 12236999999999999999999999999 477776664
No 54
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.30 E-value=0.00046 Score=66.28 Aligned_cols=94 Identities=19% Similarity=0.335 Sum_probs=66.9
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|.+|+..++.|.+. ++++++|.|. +++....+.+ .+| + .++ .+.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g-----~--------------~~~--~~~ 57 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADP--FIEGAQRLAE---ANG-----A--------------EAV--ASP 57 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---TTT-----C--------------EEE--SSH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcC-----C--------------cee--CCH
Confidence 48999999999999999999887 8999999986 6665433321 111 0 111 122
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++ ..+..+|+|+-||......+.+...+++|. .|++.-|.
T Consensus 58 ~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP~ 98 (344)
T 3euw_A 58 DEV-FARDDIDGIVIGSPTSTHVDLITRAVERGI-PALCEKPI 98 (344)
T ss_dssp HHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTTC-CEEECSCS
T ss_pred HHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcCC-cEEEECCC
Confidence 221 112368999999999999999999999984 57776664
No 55
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.28 E-value=0.00026 Score=64.74 Aligned_cols=134 Identities=19% Similarity=0.192 Sum_probs=79.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEE 82 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~ 82 (364)
|||||+|+|++|+.+++.|.+.+++++++.|.. . +.+. .+ .++++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~--~--------------------~~~~-----------~~--~~~~~ 45 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVR--G--------------------EHEK-----------MV--RGIDE 45 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS--C--------------------CCTT-----------EE--SSHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecC--c--------------------chhh-----------hc--CCHHH
Confidence 499999999999999999886699998887751 0 0000 11 23333
Q ss_pred CCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC-CCCeEEcccCccccC-CCCCeEecCCchhhhHHhHHH
Q psy8544 83 IPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK-DAPMFVCGVNLDKYD-PSHSVVSNASCTTNCLAPLAK 160 (364)
Q Consensus 83 ~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~-d~p~vV~gVN~~~~~-~~~~IISnaSCTTn~Lap~lk 160 (364)
+-- .++|+|++||+.....+.+..++++|. .||+..|.. +.+-+..++- +... ....++-.+++... ...++
T Consensus 46 l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~~~~~ 119 (236)
T 2dc1_A 46 FLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGG--LDAIF 119 (236)
T ss_dssp HTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSC--HHHHH
T ss_pred Hhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccC--hHHHH
Confidence 211 379999999998888888888999887 333333322 1110000110 0011 12233333333322 23344
Q ss_pred HHhhhcCeeEEEEEeeecc
Q psy8544 161 VIHDNFEILEGLMTTVHAV 179 (364)
Q Consensus 161 ~L~d~fGI~~~~~TTvha~ 179 (364)
.... |+++..+++.|..
T Consensus 120 ~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 120 SASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HTGG--GEEEEEEEEEEEG
T ss_pred Hhhc--cccEEEEEEEcCh
Confidence 4443 8999999988875
No 56
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.28 E-value=0.00044 Score=54.87 Aligned_cols=96 Identities=19% Similarity=0.229 Sum_probs=60.9
Q ss_pred CCceEEEEccChHHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~-~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
|.+||+|.|.|.||+.+++.|.+++ .+|+.+.. +++.+..+.... +. . ......+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~---------~~-----~-------~~~d~~~ 59 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMG---------VA-----T-------KQVDAKD 59 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTT---------CE-----E-------EECCTTC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCC---------Cc-----E-------EEecCCC
Confidence 3569999999999999999998886 78777654 455443332110 00 0 0000111
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEe
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIs 120 (364)
++.+.-.-.++|+||.|+|.......+...++.|++++.++
T Consensus 60 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 60 EAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred HHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 11111001278999999998887788888889999776554
No 57
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.28 E-value=0.00048 Score=65.93 Aligned_cols=96 Identities=21% Similarity=0.199 Sum_probs=66.0
Q ss_pred CCceEEEEccChHHHHHHHHHhcC---CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR---NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~---~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
|++||||+|+|.||+..++.+... ++++++|.|. +++....+.+ .||. . + ++
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~--~~~~a~~~a~---~~~~---~-~--------------~~-- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFAQ---KHDI---P-K--------------AY-- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS--SHHHHHHHHH---HHTC---S-C--------------EE--
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC--CHHHHHHHHH---HcCC---C-c--------------cc--
Confidence 889999999999999999998764 4789999986 6654333221 1111 0 0 01
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+.+++- .+..+|+|+-||....-.+.+..++++| |.|++--|.
T Consensus 56 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP~ 99 (334)
T 3ohs_X 56 GSYEELA-KDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKPM 99 (334)
T ss_dssp SSHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCC
Confidence 1111111 1236899999999999999999999999 578887774
No 58
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.23 E-value=0.00063 Score=68.72 Aligned_cols=91 Identities=18% Similarity=0.269 Sum_probs=61.2
Q ss_pred CceEEEEccChHHHHHHHHHhc----------CCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEE
Q psy8544 2 AYKIGINGFGRIGRLVLREALH----------RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKK 71 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~----------~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~ 71 (364)
++||||.|+|.||+.+++.+.+ .+++|++|.+. +++....++ + +.
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~--~~~~~~~~~--~-------------~~-------- 64 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR--NLDKAEALA--G-------------GL-------- 64 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS--CHHHHHHHH--T-------------TC--------
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC--CHHHhhhhc--c-------------cC--------
Confidence 4799999999999999988763 37899999986 554322111 0 00
Q ss_pred EEEEecCCCCCCCCcCCCccEEEeecCC-CCCHhhHHHHHhCCCCEEEEeCC
Q psy8544 72 IAVFQKMKPEEIPWSQTGAEYIVESTGV-FKTKDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 72 I~v~~~~~p~~~~w~~~gvDiV~estG~-f~s~e~a~~hl~aGakkVIIsap 122 (364)
.++ .+++++ ..+..+|+|++||+. ....+.+..++++|. .|+..+|
T Consensus 65 -~~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 65 -PLT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp -CEE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred -ccc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 011 122221 122368999999985 777888999999986 4555556
No 59
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.17 E-value=0.00064 Score=65.63 Aligned_cols=94 Identities=13% Similarity=0.114 Sum_probs=66.6
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|.||+..++.+.+. ++++++|.|. +++....+.+ .+|- . .+ .+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~-----~--------------~~--~~~ 58 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGK---RYNC-----A--------------GD--ATM 58 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHH---HHTC-----C--------------CC--SSH
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcCC-----C--------------Cc--CCH
Confidence 58999999999999999999887 8999999986 6665433321 0110 0 00 111
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 59 ~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 99 (354)
T 3db2_A 59 EAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKPI 99 (354)
T ss_dssp HHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESSS
T ss_pred HHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccCC
Confidence 111 11236899999999999999999999998 467777674
No 60
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.16 E-value=0.00068 Score=65.43 Aligned_cols=92 Identities=17% Similarity=0.290 Sum_probs=65.0
Q ss_pred CceEEEEccChHHHH-HHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRL-VLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~-vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.+|+. .++++.+. +++|++|.|. +++... -+| .+ + .++ .+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~--~~~-------~~-~--------------~~~--~~ 58 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVH--ADW-------PA-I--------------PVV--SD 58 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHH--TTC-------SS-C--------------CEE--SC
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHH--hhC-------CC-C--------------ceE--CC
Confidence 489999999999997 78888777 8999999996 665432 111 00 0 111 12
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++- .+..+|+|+-||......+.+..++++| |.|++--|-
T Consensus 59 ~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKPl 100 (352)
T 3kux_A 59 PQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKPF 100 (352)
T ss_dssp HHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSSC
T ss_pred HHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECCC
Confidence 22221 1236999999999999999999999999 577776663
No 61
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.15 E-value=0.00033 Score=67.53 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=61.9
Q ss_pred CCceEEEEccChHHHH-HHH-HHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 1 MAYKIGINGFGRIGRL-VLR-EALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 1 m~irVaInG~G~IGr~-vlr-~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
|++||||+|+|.||+. .++ ++... +++|++|.|. +++.. ..+ .++ .+ +.++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~--~~~~~-~~~------~~~-------------~~--~~~~-- 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRR--HAKPE-EQA------PIY-------------SH--IHFT-- 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECS--SCCGG-GGS------GGG-------------TT--CEEE--
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcC--CHhHH-HHH------Hhc-------------CC--CceE--
Confidence 7899999999999995 667 44555 8999999986 22211 111 000 01 1122
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+.+++- .+..+|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 55 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (345)
T 3f4l_A 55 SDLDEVL-NDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKPF 98 (345)
T ss_dssp SCTHHHH-TCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred CCHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 2333321 2236999999999999899999999999 466665554
No 62
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.15 E-value=0.0015 Score=60.93 Aligned_cols=70 Identities=13% Similarity=0.190 Sum_probs=52.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
|||+|+| +|++||.+++++.++ +++++++-|...| +
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d------------------------------------------l 38 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP------------------------------------------L 38 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC------------------------------------------T
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC------------------------------------------H
Confidence 5999999 699999999999877 8999988764101 1
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCE
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKK 116 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakk 116 (364)
+.+. ..++|+|+|+|......+.+...+++|..-
T Consensus 39 ~~~~--~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~ 72 (245)
T 1p9l_A 39 SLLT--DGNTEVVIDFTHPDVVMGNLEFLIDNGIHA 72 (245)
T ss_dssp HHHH--HTTCCEEEECSCTTTHHHHHHHHHHTTCEE
T ss_pred HHHh--ccCCcEEEEccChHHHHHHHHHHHHcCCCE
Confidence 1100 015789999988777778888888888743
No 63
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.13 E-value=0.00031 Score=66.49 Aligned_cols=94 Identities=28% Similarity=0.383 Sum_probs=58.5
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||+|+| +|++||.+++++.++ ++++|++-|.. ..+. .|+-.+.+ .+ +. .| +.++ .+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~-~~~~----------~G~d~gel--~g--~~-~g--v~v~--~d 66 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRT-GSPQ----------LGQDAGAF--LG--KQ-TG--VALT--DD 66 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCT-TCTT----------TTSBTTTT--TT--CC-CS--CBCB--CC
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEec-Cccc----------ccccHHHH--hC--CC-CC--ceec--CC
Confidence 48999999 999999999999887 99999987752 1000 11111110 00 00 01 1121 22
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEE
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVII 119 (364)
.+.+- .++|+|||+|......+.+...+++|.. +|+
T Consensus 67 l~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVi 102 (272)
T 4f3y_A 67 IERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVI 102 (272)
T ss_dssp HHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred HHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 22211 1589999999777677788888899884 455
No 64
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.10 E-value=0.00036 Score=65.06 Aligned_cols=32 Identities=28% Similarity=0.483 Sum_probs=29.2
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~ 34 (364)
++||+|+|+|++||.+++++.++ + ++|++-|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~ 35 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGH-EIVGVIEN 35 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEec
Confidence 48999999999999999999988 8 99998775
No 65
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.07 E-value=0.00085 Score=65.11 Aligned_cols=96 Identities=22% Similarity=0.231 Sum_probs=65.9
Q ss_pred CceEEEEccChHHHHHHHHHh-cC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRLVLREAL-HR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~-~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.||+..++.+. .. ++++++|.|. +++....+.+ .||. . ...+ .+
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~g~---~--------------~~~~--~~ 78 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI--VAGRAQAALD---KYAI---E--------------AKDY--ND 78 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS--STTHHHHHHH---HHTC---C--------------CEEE--SS
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH---HhCC---C--------------Ceee--CC
Confidence 689999999999999999998 55 8999999986 4443322221 1110 0 0111 12
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++ ..+..+|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 79 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKPl 120 (357)
T 3ec7_A 79 YHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKPL 120 (357)
T ss_dssp HHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred HHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecCc
Confidence 2221 11236899999999999999999999999 577776674
No 66
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.07 E-value=0.0012 Score=62.89 Aligned_cols=94 Identities=20% Similarity=0.249 Sum_probs=65.7
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|.+|+.+++.+.+. ++++++|.|. +++....+.+ .+|. ..++ .+.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~~~---~~~~------------------~~~~--~~~ 55 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR--KLETAATFAS---RYQN------------------IQLF--DQL 55 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHHGG---GSSS------------------CEEE--SCH
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHH---HcCC------------------CeEe--CCH
Confidence 37999999999999999999877 8999999986 5654332221 1110 0111 223
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++- +.++|+|+-||......+.+..++++|. .|++--|.
T Consensus 56 ~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP~ 95 (325)
T 2ho3_A 56 EVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKPA 95 (325)
T ss_dssp HHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESSC
T ss_pred HHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecCC
Confidence 3322 2378999999998888888999999985 56666564
No 67
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.06 E-value=0.0011 Score=64.34 Aligned_cols=85 Identities=22% Similarity=0.281 Sum_probs=57.1
Q ss_pred CCceEEEEccChHHHHHHHHHhcC---------CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEE
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR---------NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKK 71 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~---------~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~ 71 (364)
+++||||.|+|.||+.+++.+.++ +++|++|.+. +++ + .-+ +. ..
T Consensus 2 k~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~--~~~------~---~~~-~~------~~-------- 55 (332)
T 2ejw_A 2 EALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR--DPR------K---PRA-IP------QE-------- 55 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS--CTT------S---CCS-SC------GG--------
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC--CHH------H---hhc-cC------cc--------
Confidence 048999999999999999998765 4799999886 211 0 000 00 00
Q ss_pred EEEEecCCCCCCCCcCCCccEEEeecCCC-CCHhhHHHHHhCCCCEEEEe
Q psy8544 72 IAVFQKMKPEEIPWSQTGAEYIVESTGVF-KTKDTASAHLKGGAKKVIIT 120 (364)
Q Consensus 72 I~v~~~~~p~~~~w~~~gvDiV~estG~f-~s~e~a~~hl~aGakkVIIs 120 (364)
.++ .+++++- .+|+|++|||.. ...+.+..++++|. -|++
T Consensus 56 -~~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVt 96 (332)
T 2ejw_A 56 -LLR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLIT 96 (332)
T ss_dssp -GEE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEE
T ss_pred -ccc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEE
Confidence 011 3455543 699999999876 34577788999986 4454
No 68
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.06 E-value=0.002 Score=62.43 Aligned_cols=34 Identities=32% Similarity=0.386 Sum_probs=29.5
Q ss_pred CCceEEEEccChHHHHHHHHHhc-------CCCcEEEEeCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALH-------RNTPVVGINDP 34 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~-------~~~~ivaInd~ 34 (364)
.++||||.|+|.||+.+++++.+ .+++|++|.|.
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 15899999999999999999975 27899999886
No 69
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.05 E-value=0.0014 Score=63.81 Aligned_cols=92 Identities=15% Similarity=0.220 Sum_probs=64.1
Q ss_pred CceEEEEccChHHHH-HHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRL-VLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~-vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.+|+. .++++.+. +++|++|.|. +++.... +| .+ + .++ .+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~~-------~~-~--------------~~~--~~ 58 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVKR--DL-------PD-V--------------TVI--AS 58 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHH--HC-------TT-S--------------EEE--SC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--hC-------CC-C--------------cEE--CC
Confidence 379999999999996 77888776 8999999997 6654321 11 00 0 111 12
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++- .+..+|+|+-||+.....+.+..++++|. .|++--|-
T Consensus 59 ~~~ll-~~~~~D~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKPl 100 (364)
T 3e82_A 59 PEAAV-QHPDVDLVVIASPNATHAPLARLALNAGK-HVVVDKPF 100 (364)
T ss_dssp HHHHH-TCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSCS
T ss_pred HHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEeCCC
Confidence 22221 12368999999999999999999999984 66665553
No 70
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.04 E-value=0.00058 Score=66.96 Aligned_cols=95 Identities=20% Similarity=0.277 Sum_probs=67.1
Q ss_pred CCceEEEEccC-hHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 1 MAYKIGINGFG-RIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 1 m~irVaInG~G-~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
|++||||+|+| .+|+..++.+... ++++++|.|. +++....+.+ .|| + .++ .
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g-----~--------------~~~--~ 54 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP--NEDVRERFGK---EYG-----I--------------PVF--A 54 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS--CHHHHHHHHH---HHT-----C--------------CEE--S
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHH---HcC-----C--------------CeE--C
Confidence 78999999999 9999999999877 8999999997 6654322221 111 0 011 1
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+.+++ ..+..+|+|+-||......+.+...+++| |.|++--|.
T Consensus 55 ~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP~ 97 (387)
T 3moi_A 55 TLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKPL 97 (387)
T ss_dssp SHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred CHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCCc
Confidence 22221 11236899999999988889999999998 467776664
No 71
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.01 E-value=0.00081 Score=65.09 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=65.5
Q ss_pred CceEEEEccChHHH-HHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGR-LVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr-~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.||+ .+++.|.+. ++++++|.|. +++....+.+ .||- ..+ .+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g~-------------------~~~--~~ 80 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFTE---RFGG-------------------EPV--EG 80 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHHH---HHCS-------------------EEE--ES
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHHH---HcCC-------------------CCc--CC
Confidence 47999999999998 788998887 8999999986 6654433221 0110 011 11
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++ ..+..+|+|+-||......+.+...+++|. .|++--|.
T Consensus 81 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP~ 122 (350)
T 3rc1_A 81 YPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKPL 122 (350)
T ss_dssp HHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESSS
T ss_pred HHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCCC
Confidence 2221 112368999999999999999999999985 57776664
No 72
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.00 E-value=0.00095 Score=63.75 Aligned_cols=95 Identities=16% Similarity=0.152 Sum_probs=59.5
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||+|+| +|++||.+++++.++ ++++|++-|.. +.+ ..|+--+.+ .+ +.-.| +.++ .+
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~-~~~----------~~G~d~gel--~G--~~~~g--v~v~--~d 81 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRK-GSS----------FVDKDASIL--IG--SDFLG--VRIT--DD 81 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCT-TCT----------TTTSBGGGG--TT--CSCCS--CBCB--SC
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC-Ccc----------ccccchHHh--hc--cCcCC--ceee--CC
Confidence 58999999 999999999999887 99999998752 111 011111110 00 00001 1222 23
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEE
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVII 119 (364)
++.+. .++|+|+|+|......+.+...+++|.. +||
T Consensus 82 l~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 82 PESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp HHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred HHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 33321 2689999999776667778888889884 444
No 73
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.98 E-value=0.00071 Score=64.22 Aligned_cols=92 Identities=17% Similarity=0.242 Sum_probs=64.4
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|.+|+.+++.|.+. ++++++|.|. +++....+ . .. +.++ .+.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~~~----------~------~~--------~~~~--~~~ 61 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLALV----------P------PG--------CVIE--SDW 61 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHTTC----------C------TT--------CEEE--SST
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHH----------H------hh--------Cccc--CCH
Confidence 48999999999999999999887 8999999986 55432111 0 11 1122 223
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++- .+.++|+|+.||......+.+...+++|. .|++.-|.
T Consensus 62 ~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~eKP~ 102 (315)
T 3c1a_A 62 RSVV-SAPEVEAVIIATPPATHAEITLAAIASGK-AVLVEKPL 102 (315)
T ss_dssp HHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTTC-EEEEESSS
T ss_pred HHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEcCCC
Confidence 2221 12368999999999888888999999984 56666564
No 74
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.97 E-value=0.0015 Score=62.55 Aligned_cols=95 Identities=14% Similarity=0.211 Sum_probs=64.1
Q ss_pred CceEEEEccChHHHHHHHHHh-cC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRLVLREAL-HR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~-~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.||+..++.+. .. ++++++|.|. +++....+.+ .+|. . .++ .+
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a~---~~g~---~---------------~~~--~~ 62 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAKN---ELGV---E---------------TTY--TN 62 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHHH---TTCC---S---------------EEE--SC
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHHH---HhCC---C---------------ccc--CC
Confidence 489999999999999999988 55 8999999986 6654432221 1110 0 011 11
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++ ..+.++|+|+.||+.....+.+...+++|. .|++.-|.
T Consensus 63 ~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKp~ 104 (346)
T 3cea_A 63 YKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAGL-NVFCEKPL 104 (346)
T ss_dssp HHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSCC
T ss_pred HHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCCC-EEEEcCCC
Confidence 2111 011268999999999888899999999984 56664453
No 75
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.95 E-value=0.0025 Score=60.62 Aligned_cols=94 Identities=16% Similarity=0.176 Sum_probs=62.5
Q ss_pred CCceEEEEccChHHHH-HHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 1 MAYKIGINGFGRIGRL-VLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 1 m~irVaInG~G~IGr~-vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
|++||||+|+|.+|+. +++.|.+. +++++ |.|. +++....+.+ .+|. .. .+ ..
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a~---~~g~---~~---------------~~-~~ 55 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLAT---RYRV---SA---------------TC-TD 55 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHHH---HTTC---CC---------------CC-SS
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHHH---HcCC---Cc---------------cc-cC
Confidence 7899999999999984 88988776 88999 8886 6665433321 1110 00 00 01
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
..+.+ +.++|+|+.||+.....+.+...+++|. .|++.-|.
T Consensus 56 ~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP~ 96 (323)
T 1xea_A 56 YRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKPL 96 (323)
T ss_dssp TTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESCS
T ss_pred HHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCCC
Confidence 11222 2379999999998888888888899885 46665553
No 76
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.94 E-value=0.0013 Score=63.07 Aligned_cols=95 Identities=17% Similarity=0.159 Sum_probs=65.2
Q ss_pred CceEEEEccChHHHH-HHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRL-VLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~-vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.||+. +++++.+. +++|+||.|. +++....+.+ .||- . .++ .+
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~---~---------------~~y--~d 77 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMAD---RFSV---P---------------HAF--GS 77 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHHH---HHTC---S---------------EEE--SS
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC---C---------------eee--CC
Confidence 489999999999986 57888776 8999999997 6665433221 1110 0 011 11
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++ ..+..+|+|+=||....-.+.+..++++|. .|++--|-
T Consensus 78 ~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKPl 119 (350)
T 4had_A 78 YEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKPL 119 (350)
T ss_dssp HHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSCC
T ss_pred HHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCCc
Confidence 2221 112368999999999999999999999985 67776564
No 77
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.90 E-value=0.0011 Score=63.43 Aligned_cols=95 Identities=19% Similarity=0.151 Sum_probs=65.3
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|.||+.+++.|.+. ++++++|.|. +++....+.+ .||. . + ++ .+.
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~---~-~--------------~~--~~~ 59 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR--RLENAQKMAK---ELAI---P-V--------------AY--GSY 59 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS--SSHHHHHHHH---HTTC---C-C--------------CB--SSH
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHH---HcCC---C-c--------------ee--CCH
Confidence 47999999999999999999886 8999999986 5544333221 1110 0 0 00 111
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++ ..+..+|+|+-||......+.+...+++| |.|++--|.
T Consensus 60 ~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 100 (330)
T 3e9m_A 60 EEL-CKDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKPF 100 (330)
T ss_dssp HHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSSC
T ss_pred HHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 111 01236899999999998899999999998 457776664
No 78
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.88 E-value=0.0026 Score=60.01 Aligned_cols=92 Identities=16% Similarity=0.139 Sum_probs=64.8
Q ss_pred CceEEEEccChHHHH-HHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRL-VLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~-vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.+|+. +++.|.+. ++++++|.|. +++....+.+ .||. .. + .+
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~~---~~--------~----------~~ 59 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKICS---DYRI---MP--------F----------DS 59 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHHH---HHTC---CB--------C----------SC
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC---CC--------c----------CC
Confidence 589999999999996 88988876 8999999986 6665433321 1110 00 0 11
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++- + ++|+|+-||+.....+.+...+++|. .|++.-|.
T Consensus 60 ~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~ 99 (308)
T 3uuw_A 60 IESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKPL 99 (308)
T ss_dssp HHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred HHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCCC
Confidence 22111 1 68999999999999999999999985 56766564
No 79
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.86 E-value=0.00071 Score=64.69 Aligned_cols=95 Identities=15% Similarity=0.193 Sum_probs=63.0
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|.||+.+++.+.+. ++++++|.|. +++....+. ..|| + . ..+ .+.
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~--~~~~~~~~a---~~~~------------~----~--~~~--~~~ 59 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR--TLESAQAFA---NKYH------------L----P--KAY--DKL 59 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS--CSSTTCC------CCC------------C----S--CEE--SCH
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHH---HHcC------------C----C--ccc--CCH
Confidence 37999999999999999998766 8999999886 222110000 0000 0 0 011 122
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++- .+..+|+|+-||......+.+...+++|. .|++--|.
T Consensus 60 ~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP~ 100 (329)
T 3evn_A 60 EDML-ADESIDVIYVATINQDHYKVAKAALLAGK-HVLVEKPF 100 (329)
T ss_dssp HHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESSC
T ss_pred HHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEccCC
Confidence 2221 12368999999999988999999999984 67777774
No 80
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.86 E-value=0.0015 Score=63.00 Aligned_cols=94 Identities=15% Similarity=0.180 Sum_probs=66.2
Q ss_pred CceEEEEccChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.+|+..++.+.+. ++++++|.|. +++....+.+ .+| +..+ .+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~---~~~-------------------~~~~--~~ 66 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVE---RTG-------------------ARGH--AS 66 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HHC-------------------CEEE--SC
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHH---HcC-------------------Ccee--CC
Confidence 47999999999999999999876 7999999986 6665433321 011 0111 12
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++ ..+.++|+|+-||......+.+...+++| |.|++--|.
T Consensus 67 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 108 (354)
T 3q2i_A 67 LTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKPM 108 (354)
T ss_dssp HHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred HHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCCC
Confidence 2222 11236899999999998889999999998 467776663
No 81
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.85 E-value=0.0012 Score=62.76 Aligned_cols=92 Identities=15% Similarity=0.183 Sum_probs=61.6
Q ss_pred CceEEEEccChHHHH-HHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRL-VLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~-vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.+|+. +++.|.+. ++++++|.|. +++....+.+ .+|. .++ .+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~-------------------~~~--~~ 58 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP--TRAKALPICE---SWRI-------------------PYA--DS 58 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS--SCTTHHHHHH---HHTC-------------------CBC--SS
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC-------------------Ccc--Cc
Confidence 479999999999996 88988776 8999999886 3332211110 0110 000 12
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
++.+ +.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 59 ~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP~ 98 (319)
T 1tlt_A 59 LSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKPL 98 (319)
T ss_dssp HHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESSS
T ss_pred HHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCCC
Confidence 2222 1368999999998888888888999885 56665554
No 82
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.85 E-value=0.0026 Score=63.51 Aligned_cols=101 Identities=16% Similarity=0.222 Sum_probs=67.2
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhh-cccccccCCcceeecCCeEEECCEEEEEEe--c
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLK-YDSTHGRFKGDVKTEGNNIVVNGKKIAVFQ--K 77 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~-ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~--~ 77 (364)
++||||+|+|.+|+..++.+... +++|++|.|. +++....+.+ +. .+|. + . ..++. +
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~-~~g~-~-~--------------~~~~~~~~ 80 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--DPYMVGRAQEILK-KNGK-K-P--------------AKVFGNGN 80 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--CHHHHHHHHHHHH-HTTC-C-C--------------CEEECSST
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHH-hcCC-C-C--------------CceeccCC
Confidence 58999999999999999998877 8999999997 6665433321 00 0110 0 0 01111 0
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+.+++ ..+..+|+|+-||....-.+.+..++++|. .|++--|.
T Consensus 81 ~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP~ 124 (444)
T 2ixa_A 81 DDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVSG 124 (444)
T ss_dssp TTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCCC
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCCC
Confidence 122222 122369999999999988899999999985 66665554
No 83
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.82 E-value=0.00097 Score=64.17 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=65.2
Q ss_pred CCceEEEEccChHHHHHHHHHhcC--------CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEE
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR--------NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKI 72 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~--------~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I 72 (364)
-++||||+|+|.||+.-++++... +.+|+||.|. +++....+.+ .||. .
T Consensus 5 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--~~~~a~~~a~---~~g~---~--------------- 61 (390)
T 4h3v_A 5 TNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--DAEAVRAAAG---KLGW---S--------------- 61 (390)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--SHHHHHHHHH---HHTC---S---------------
T ss_pred CcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--CHHHHHHHHH---HcCC---C---------------
Confidence 038999999999999888877543 2489999997 6765433321 1110 0
Q ss_pred EEEecCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC
Q psy8544 73 AVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK 124 (364)
Q Consensus 73 ~v~~~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~ 124 (364)
.++ .+.+++ ..+.++|.|+=||....-.+.+..++++| |.|++--|-+
T Consensus 62 ~~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKPla 109 (390)
T 4h3v_A 62 TTE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKPLA 109 (390)
T ss_dssp EEE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSSC
T ss_pred ccc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecCcc
Confidence 011 122221 12237999999999999999999999999 4777766643
No 84
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.81 E-value=0.0021 Score=62.20 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=65.3
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|.||+.+++.+.+. ++++++|.|. +++....+.+ .||... .. .++ .+.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a~---~~~~~~-~~--------------~~~--~~~ 63 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR--SLEKAKAFAT---ANNYPE-ST--------------KIH--GSY 63 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HTTCCT-TC--------------EEE--SSH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCCCC-CC--------------eee--CCH
Confidence 58999999999999999999877 8999999986 5654332221 111100 00 111 112
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++ ..+..+|+|+.||......+.+...+++|. .|++--|.
T Consensus 64 ~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP~ 104 (362)
T 1ydw_A 64 ESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKPV 104 (362)
T ss_dssp HHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSSC
T ss_pred HHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecCC
Confidence 211 112268999999999888899999999985 56665553
No 85
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.80 E-value=0.0012 Score=65.08 Aligned_cols=96 Identities=15% Similarity=0.154 Sum_probs=65.7
Q ss_pred CceEEEEccChHHHHHHHHHhcC---------CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEE
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR---------NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKI 72 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~---------~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I 72 (364)
++||||+|+|.||+..++++.+. +++||||.|+ +++....+.+ .||. . +
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~--~~~~a~~~a~---~~~~---~-~------------- 83 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ--DQAMAERHAA---KLGA---E-K------------- 83 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS--SHHHHHHHHH---HHTC---S-E-------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC--CHHHHHHHHH---HcCC---C-e-------------
Confidence 48999999999999988887542 5799999997 6665433321 1111 0 0
Q ss_pred EEEecCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC
Q psy8544 73 AVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK 124 (364)
Q Consensus 73 ~v~~~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~ 124 (364)
++ .+.+++ ..+..+|+|+=||....-.+.+..++++|. .|++--|-+
T Consensus 84 -~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP~a 130 (412)
T 4gqa_A 84 -AY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAGK-HVYCEKPLA 130 (412)
T ss_dssp -EE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESCSC
T ss_pred -EE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcCC-CeEeecCCc
Confidence 11 111111 122368999999999999999999999994 677777743
No 86
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.78 E-value=0.00062 Score=66.00 Aligned_cols=33 Identities=27% Similarity=0.339 Sum_probs=28.9
Q ss_pred CceEEEEccChHHHHHHHHHhcC--------CCcEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR--------NTPVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~--------~~~ivaInd~ 34 (364)
++||||.|+|.||+.+++.+.++ +++|++|.|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 48999999999999999998653 4899999886
No 87
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.75 E-value=0.0014 Score=61.39 Aligned_cols=132 Identities=18% Similarity=0.178 Sum_probs=77.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEE 82 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~ 82 (364)
|||+|.|||.||+.++|. . ++|++++-+ . . .| .+ |- .+ ..|.+.
T Consensus 13 ~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~-------------k-~g-----------el---gv--~a--~~d~d~ 56 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-R-------------I-SK-----------DI---PG--VV--RLDEFQ 56 (253)
T ss_dssp CEEEEECCSHHHHHHHHH--S-CCSEEEEEC-S-------------S-CC-----------CC---SS--SE--ECSSCC
T ss_pred ceEEEECcCHHHHHHHhc--C-CcEEEEEEe-c-------------c-cc-----------cc---Cc--ee--eCCHHH
Confidence 799999999999999998 4 899988744 1 0 01 11 21 11 245666
Q ss_pred CCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC-CCCCeEEcccCccccCCCCCe-E-ecCCchhhhHHhHH
Q psy8544 83 IPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS-KDAPMFVCGVNLDKYDPSHSV-V-SNASCTTNCLAPLA 159 (364)
Q Consensus 83 ~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps-~d~p~vV~gVN~~~~~~~~~I-I-SnaSCTTn~Lap~l 159 (364)
+-. ..|+|+||++...-.++.+..|++|..-|+.|... +| |-+.-.+..-.-....+| + |-+..--.+ |
T Consensus 57 lla---~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S~gaLad-~~l~~~L~~aA~~gg~~l~vpSGAi~GlD~----l 128 (253)
T 1j5p_A 57 VPS---DVSTVVECASPEAVKEYSLQILKNPVNYIIISTSAFAD-EVFRERFFSELKNSPARVFFPSGAIGGLDV----L 128 (253)
T ss_dssp CCT---TCCEEEECSCHHHHHHHHHHHTTSSSEEEECCGGGGGS-HHHHHHHHHHHHTCSCEEECCCTTCCCHHH----H
T ss_pred Hhh---CCCEEEECCCHHHHHHHHHHHHHCCCCEEEcChhhhcC-HHHHHHHHHHHHHCCCeEEecCCcccchhH----H
Confidence 652 68999999988866777888999998544444221 12 100000000000111222 1 333333223 2
Q ss_pred HHHhhhcCeeEEEEEeeeccc
Q psy8544 160 KVIHDNFEILEGLMTTVHAVT 180 (364)
Q Consensus 160 k~L~d~fGI~~~~~TTvha~t 180 (364)
+... -+|+++.++|.-+..
T Consensus 129 ~aa~--g~l~~V~~~t~K~P~ 147 (253)
T 1j5p_A 129 SSIK--DFVKNVRIETIKPPK 147 (253)
T ss_dssp HHHG--GGEEEEEEEEEECGG
T ss_pred HHhc--CCccEEEEEEeCChH
Confidence 3333 689999999887763
No 88
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.73 E-value=0.00044 Score=66.55 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=62.8
Q ss_pred CceEEEEccChHHH-HHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGR-LVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr-~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.||+ ..++++.+. +++|++|.|. +++ ++ | +.++ .+
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~--~~~-------------~~--------------g--~~~~--~~ 71 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASR--HGT-------------VE--------------G--VNSY--TT 71 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECS--SCC-------------CT--------------T--SEEE--SS
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeC--Chh-------------hc--------------C--CCcc--CC
Confidence 48999999999999 789999887 8999999986 211 00 1 1111 12
Q ss_pred CCCCCCcC-CCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQ-TGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~-~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++- .+ ..+|+|+-||....-.+.+..++++| |.|++--|.
T Consensus 72 ~~~ll-~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~ 114 (330)
T 4ew6_A 72 IEAML-DAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKPP 114 (330)
T ss_dssp HHHHH-HHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSSS
T ss_pred HHHHH-hCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 22221 11 36899999999988889999999999 577776664
No 89
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.72 E-value=0.0012 Score=64.06 Aligned_cols=92 Identities=20% Similarity=0.252 Sum_probs=63.6
Q ss_pred CceEEEEccChHHHH-HHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRL-VLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~-vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.+|+. .++++.+. +++|++|.|. +++. ++ .+|. + +.++ .+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~----~~-----~~~~-------------~--~~~~--~~ 56 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER--SKEL----SK-----ERYP-------------Q--ASIV--RS 56 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS--SCCG----GG-----TTCT-------------T--SEEE--SC
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHH----HH-----HhCC-------------C--CceE--CC
Confidence 379999999999997 78888776 8999999986 3322 10 0110 1 0111 22
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++- .+..+|+|+-||....-.+.+..++++|. .|++--|.
T Consensus 57 ~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP~ 98 (362)
T 3fhl_A 57 FKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAGK-NVVVEKPF 98 (362)
T ss_dssp SHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESSC
T ss_pred HHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEecCC
Confidence 33221 22369999999999998999999999984 67776664
No 90
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.64 E-value=0.0037 Score=60.52 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=29.3
Q ss_pred CceEEEEccChHHHHHHHHHhcC---------CCcEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR---------NTPVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~---------~~~ivaInd~ 34 (364)
++||||.|+|.||+.+++.+.++ +++|++|.|.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 38999999999999999998753 7899999986
No 91
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.62 E-value=0.0031 Score=62.90 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=65.7
Q ss_pred CceEEEEccChHHH-HHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGR-LVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr-~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.+|+ .+++.+.+. ++++++|.|. +++....+.+ .||.-... +.++ .+
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~a~---~~g~~~~~--------------~~~~--~~ 141 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVAA---EYGVDPRK--------------IYDY--SN 141 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS--CHHHHHHHHH---HTTCCGGG--------------EECS--SS
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCCCccc--------------cccc--CC
Confidence 48999999999997 889988776 8999999996 6654332221 11110000 1111 22
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++- .+.++|+|+.||......+.+...+++|. .|++--|.
T Consensus 142 ~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKPl 183 (433)
T 1h6d_A 142 FDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKPM 183 (433)
T ss_dssp GGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSC
T ss_pred HHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCCC
Confidence 33321 12369999999999988899999999985 56665553
No 92
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.62 E-value=0.0022 Score=62.26 Aligned_cols=94 Identities=15% Similarity=0.210 Sum_probs=64.6
Q ss_pred ceEEEEccChHHHH-HHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGINGFGRIGRL-VLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaInG~G~IGr~-vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
+||||+|+|.||+. +++++.+. ++++++|.|. +++....+.+ +|.. . .++ .+.
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~------~~~~-~--------------~~~--~~~ 60 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRVHR------FISD-I--------------PVL--DNV 60 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGGGG------TSCS-C--------------CEE--SSH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHH------hcCC-C--------------ccc--CCH
Confidence 79999999999995 88998877 8999999986 6664322221 1100 0 011 122
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++- .+.++|+|+-||....-.+.+...+++|. .|++--|.
T Consensus 61 ~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPl 101 (359)
T 3m2t_A 61 PAML-NQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKPP 101 (359)
T ss_dssp HHHH-HHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSCS
T ss_pred HHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECCC
Confidence 2221 12368999999998888899999999984 57776664
No 93
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.60 E-value=0.0027 Score=64.15 Aligned_cols=103 Identities=19% Similarity=0.294 Sum_probs=61.7
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccc-cCCcceeecCC--eEE---ECCEEEEE
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHG-RFKGDVKTEGN--NIV---VNGKKIAV 74 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g-~~~~~v~~~~~--~l~---i~gk~I~v 74 (364)
++||||+|+|+||+.+++.+.+. +++|++|.|. +++......+ ..|| +|+ +...++ .+. -.+. +.+
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~--~~era~~~a~--~~yG~~~~--~~~~~~~~~i~~a~~~g~-~~v 95 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR--RLPNTFKAIR--TAYGDEEN--AREATTESAMTRAIEAGK-IAV 95 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS--STHHHHHHHH--HHHSSSTT--EEECSSHHHHHHHHHTTC-EEE
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH--HhcCCccc--cccccchhhhhhhhccCC-ceE
Confidence 58999999999999999988776 8999999997 5655433331 0012 111 110000 000 0010 122
Q ss_pred EecCCCCCCCCcCCCccEEEeecCCC-CCHhhHHHHHhCCC
Q psy8544 75 FQKMKPEEIPWSQTGAEYIVESTGVF-KTKDTASAHLKGGA 114 (364)
Q Consensus 75 ~~~~~p~~~~w~~~gvDiV~estG~f-~s~e~a~~hl~aGa 114 (364)
+ .|.+++ ..+.++|+|++|||.. ...+.+..++++|.
T Consensus 96 ~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK 133 (446)
T 3upl_A 96 T--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK 133 (446)
T ss_dssp E--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC
T ss_pred E--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC
Confidence 2 223222 1223799999999864 45678888999886
No 94
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.42 E-value=0.0082 Score=57.66 Aligned_cols=95 Identities=15% Similarity=0.130 Sum_probs=61.5
Q ss_pred CceEEEEccChHHHHHHHHHhc-------C-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEE
Q psy8544 2 AYKIGINGFGRIGRLVLREALH-------R-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIA 73 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~-------~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~ 73 (364)
++||||+|+|.||+.-++++.. . +++||||.|+ +++....+.+ .||. . .
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~---~---------------~ 81 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA--NAGLAEARAG---EFGF---E---------------K 81 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHHH---HHTC---S---------------E
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC--CHHHHHHHHH---HhCC---C---------------e
Confidence 5899999999999987776532 2 6899999997 4443322221 1110 0 0
Q ss_pred EEecCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 74 VFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 74 v~~~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
++ .+.+++ ..+.++|.|+=||....-.+.+..++++|. .|++--|-
T Consensus 82 ~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKPl 127 (393)
T 4fb5_A 82 AT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKPM 127 (393)
T ss_dssp EE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSCS
T ss_pred ec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccCC
Confidence 11 111111 112368999999999999999999999986 56665564
No 95
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.32 E-value=0.0064 Score=58.40 Aligned_cols=95 Identities=20% Similarity=0.171 Sum_probs=66.3
Q ss_pred CceEEEEccC-hHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 2 AYKIGINGFG-RIGRLVLREALHR--NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 2 ~irVaInG~G-~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
++||||+|+| .+|+..++.+.+. ++++++|.|. +++....+.+ .||. . .++ .
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~~~----~--------------~~~--~ 72 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR--TRSHAEEFAK---MVGN----P--------------AVF--D 72 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS--SHHHHHHHHH---HHSS----C--------------EEE--S
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC--CHHHHHHHHH---HhCC----C--------------ccc--C
Confidence 5899999999 8999999998775 6999999997 6665433321 1110 0 111 1
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+.+++ ..+..+|+|+-||+...-.+.+..++++|. .|++--|.
T Consensus 73 ~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPl 115 (340)
T 1zh8_A 73 SYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKGV-HVICEKPI 115 (340)
T ss_dssp CHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESSS
T ss_pred CHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCCC-cEEEeCCC
Confidence 22211 112368999999999988899999999994 67776664
No 96
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.23 E-value=0.0058 Score=59.34 Aligned_cols=96 Identities=15% Similarity=0.164 Sum_probs=64.4
Q ss_pred CceEEEEccChHHH-HHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGR-LVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr-~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+|.+|+ .++.++...+++|++|.|. +++....+.+ .||. . .++ .+.
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~---~~~~----~--------------~~~--~~~ 80 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEK--DDALAAEFSA---VYAD----A--------------RRI--ATA 80 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECS--CHHHHHHHHH---HSSS----C--------------CEE--SCH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcC--CHHHHHHHHH---HcCC----C--------------ccc--CCH
Confidence 58999999999995 4666665558999999997 6665433321 1110 0 011 122
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK 124 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~ 124 (364)
+++ ..+.++|+|+-||....-.+.+..++++| |.|++--|.+
T Consensus 81 ~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPla 122 (361)
T 3u3x_A 81 EEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKPGM 122 (361)
T ss_dssp HHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESCSC
T ss_pred HHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCCCC
Confidence 221 11236999999999988889999999998 4677777743
No 97
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.20 E-value=0.016 Score=54.85 Aligned_cols=94 Identities=19% Similarity=0.198 Sum_probs=62.1
Q ss_pred ceEEEEccChHHHHH-HHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRLV-LREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~v-lr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
+||||+|+|.+|+.+ ++.+.+.++++++|.|. +++....+.+ .+|. . + ++ .+.+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~--~~~~~~~~~~---~~g~---~-~--------------~~--~~~~ 55 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMST--SAERGAAYAT---ENGI---G-K--------------SV--TSVE 55 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECS--CHHHHHHHHH---HTTC---S-C--------------CB--SCHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECC--CHHHHHHHHH---HcCC---C-c--------------cc--CCHH
Confidence 599999999999997 77776668999999986 6665433321 1111 0 0 00 1111
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
++ ..+.++|+|+.||......+.+...+++|. .|++--|.
T Consensus 56 ~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ekP~ 95 (332)
T 2glx_A 56 EL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLCEKPL 95 (332)
T ss_dssp HH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred HH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEEeCCC
Confidence 11 011268999999998888888888999984 56665453
No 98
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.18 E-value=0.014 Score=55.70 Aligned_cols=94 Identities=12% Similarity=0.170 Sum_probs=61.1
Q ss_pred CceEEEEccChHHH-HHHHHHhcCCCcEEEEeCCCCCHHHHHHHh-hcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGR-LVLREALHRNTPVVGINDPHLSVDYLAYML-KYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr-~vlr~l~~~~~~ivaInd~~~~~~~~a~ll-~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+|.+|. .+++.+...+++|++|.|. +++....+- +|. + ++ ++ .+
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~--~~~~~~~~a~~~~-------~-~~--------------~~--~~ 57 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFES--DSDNRAKFTSLFP-------S-VP--------------FA--AS 57 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECS--CTTSCHHHHHHST-------T-CC--------------BC--SC
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCC--CHHHHHHHHHhcC-------C-Cc--------------cc--CC
Confidence 58999999999996 5777775448999999986 333211111 110 0 00 00 11
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+++ ..+.++|+|+-||+...-.+.+...+++|. .|++--|.
T Consensus 58 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP~ 99 (336)
T 2p2s_A 58 AEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKPP 99 (336)
T ss_dssp HHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSC
T ss_pred HHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCCC
Confidence 1111 112368999999999988999999999985 56665564
No 99
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.15 E-value=0.0055 Score=60.82 Aligned_cols=106 Identities=15% Similarity=0.172 Sum_probs=59.2
Q ss_pred ceEEEEcc-ChHHHHHHHHHhcC-C-CcEEEE-eCCCCCHHHHHHHhh-cccccccCCcceeecCC----eEE--ECCEE
Q psy8544 3 YKIGINGF-GRIGRLVLREALHR-N-TPVVGI-NDPHLSVDYLAYMLK-YDSTHGRFKGDVKTEGN----NIV--VNGKK 71 (364)
Q Consensus 3 irVaInG~-G~IGr~vlr~l~~~-~-~~ivaI-nd~~~~~~~~a~ll~-ydS~~g~~~~~v~~~~~----~l~--i~gk~ 71 (364)
+||+|.|+ |.||+.+++++.++ + |+++++ .+. +++.+....+ |.-. .+...+. .+. +.+..
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~--ni~~l~~~~~~f~~~------~v~v~d~~~~~~l~~~l~~~~ 76 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR--NVKDLADAAKRTNAK------RAVIADPSLYNDLKEALAGSS 76 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS--CHHHHHHHHHHTTCS------EEEESCGGGHHHHHHHTTTCS
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC--CHHHHHHHHHHcCCc------EEEEcChHHHHHHHHHhccCC
Confidence 79999995 99999999999887 4 999988 443 5665544332 2110 0110000 000 00101
Q ss_pred EEEEe-cCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEE
Q psy8544 72 IAVFQ-KMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 72 I~v~~-~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVII 119 (364)
+.++. ..+...+- ... +|+|+++++.+...+.+.+++++|. +|+.
T Consensus 77 ~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aGK-~Vvl 122 (388)
T 1r0k_A 77 VEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKGK-TVAL 122 (388)
T ss_dssp SEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTTS-EEEE
T ss_pred cEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCCC-EEEE
Confidence 12221 11111111 123 8999999955667777778888884 4444
No 100
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.14 E-value=0.0017 Score=62.24 Aligned_cols=98 Identities=14% Similarity=0.102 Sum_probs=63.2
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCC--CHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDPHL--SVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~--~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
|++||||+|+|.+|+..++++ ..+++|++|.|... ..+..+..++ .||. .. .++ .
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~---~~~~---~~--------------~~~--~ 57 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAIS---EMNI---KP--------------KKY--N 57 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHH---TTTC---CC--------------EEC--S
T ss_pred CceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHH---HcCC---CC--------------ccc--C
Confidence 889999999999999888887 44899999998621 1223322221 0110 00 111 1
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+.+++ ..+..+|+|+-||....-.+.+..++++|. .|++--|-
T Consensus 58 ~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKPl 100 (337)
T 3ip3_A 58 NWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKPI 100 (337)
T ss_dssp SHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSSS
T ss_pred CHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCCC
Confidence 22222 112368999999999888889999999995 57776664
No 101
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.10 E-value=0.0028 Score=59.80 Aligned_cols=98 Identities=17% Similarity=0.256 Sum_probs=59.2
Q ss_pred CceEEEEcc-ChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGF-GRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~-G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
+|||+|+|. |++||.+++.+.+. ++++|++-|.. ++. + .|+--+.. .+ +.-.+ +.+. .+
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~--~~~---~------~g~d~~~~--~g--~~~~~--v~~~--~d 65 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE--GSS---L------LGSDAGEL--AG--AGKTG--VTVQ--SS 65 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT--TCT---T------CSCCTTCS--SS--SSCCS--CCEE--SC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC--chh---h------hhhhHHHH--cC--CCcCC--ceec--CC
Confidence 389999995 99999999988766 89999887641 110 0 01100000 00 00001 2222 23
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsap 122 (364)
.+.+- .++|+|+|+|......+.+...+++|.. +|+..+
T Consensus 66 l~~~l---~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 66 LDAVK---DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp STTTT---TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred HHHHh---cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 43322 2689999988766677888889999984 555444
No 102
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.04 E-value=0.0084 Score=56.56 Aligned_cols=88 Identities=17% Similarity=0.251 Sum_probs=61.0
Q ss_pred CceEEEEccChHHHHHHHHHhc---C-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 2 AYKIGINGFGRIGRLVLREALH---R-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~---~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
++||||+|+|.||+..++.+.. . ++++++|.+.. . + ...+ |- ..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~--~------~--a~~~-----------------g~--~~--- 54 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR--E------L--GSLD-----------------EV--RQ--- 54 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS--C------C--CEET-----------------TE--EB---
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECch--H------H--HHHc-----------------CC--CC---
Confidence 4899999999999999998875 3 78999998751 0 0 0000 10 10
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 55 ~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPl 98 (294)
T 1lc0_A 55 ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYPM 98 (294)
T ss_dssp CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESCS
T ss_pred CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCCC
Confidence 122222 112379999999999988999999999985 56665554
No 103
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.98 E-value=0.053 Score=49.50 Aligned_cols=91 Identities=14% Similarity=0.058 Sum_probs=56.3
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
|++||.|.|.|.||+.+++.|.+++.+|+++... .+....+.. .. +.+.+ -|.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~---~~~~~~~~~----------------~~-------~~~~~-~D~ 56 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRN---PDQMEAIRA----------------SG-------AEPLL-WPG 56 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESC---GGGHHHHHH----------------TT-------EEEEE-SSS
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC---hhhhhhHhh----------------CC-------CeEEE-ecc
Confidence 6789999999999999999999888899888653 222112211 00 11111 233
Q ss_pred CCCCCcCCCccEEEeecCCCCCH-----hhHHHHHh--CCCCEEEEe
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTK-----DTASAHLK--GGAKKVIIT 120 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~-----e~a~~hl~--aGakkVIIs 120 (364)
.+++ ..++|+||.+++..... ..+....+ .|.+++|..
T Consensus 57 ~d~~--~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 57 EEPS--LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp SCCC--CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred cccc--cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEe
Confidence 3333 34899999999765431 22233334 577887764
No 104
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.92 E-value=0.0079 Score=57.43 Aligned_cols=95 Identities=20% Similarity=0.178 Sum_probs=64.3
Q ss_pred CceEEEEcc-ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGF-GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~-G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+ |.||+..++++.+.+.+++++.|. +++. + .+ +.. |. + ..++ .+.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~--~~~~-~-~~--~~~---~~-------------~--~~~~--~~~ 56 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDI--NDSV-G-II--DSI---SP-------------Q--SEFF--TEF 56 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECS--SCCC-G-GG--GGT---CT-------------T--CEEE--SSH
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcC--CHHH-H-HH--Hhh---CC-------------C--CcEE--CCH
Confidence 489999999 899999999998778999999987 2221 0 01 110 10 0 0111 112
Q ss_pred CCCC--------CcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIP--------WSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~--------w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++. ..+.++|+|+-||....-.+.+..++++|. .|++--|-
T Consensus 57 ~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKPl 106 (318)
T 3oa2_A 57 EFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGC-DVICEKPL 106 (318)
T ss_dssp HHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSC
T ss_pred HHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEEECCC
Confidence 2110 013479999999999999999999999994 67776664
No 105
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.88 E-value=0.0077 Score=57.36 Aligned_cols=95 Identities=19% Similarity=0.299 Sum_probs=64.1
Q ss_pred CceEEEEcc-ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGF-GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~-G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
++||||+|+ |.||+..++++.+.+.++|+|.|. +++. +. + +.. |. + ..++ .+.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~--~~~~-~~-~--~~~---~~-------------~--~~~~--~~~ 56 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDP--ATNV-GL-V--DSF---FP-------------E--AEFF--TEP 56 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECS--SCCC-GG-G--GGT---CT-------------T--CEEE--SCH
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcC--CHHH-HH-H--Hhh---CC-------------C--Ccee--CCH
Confidence 389999999 799999999998778999999987 2221 10 0 110 10 0 0111 112
Q ss_pred CCCC-----C--cCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 81 EEIP-----W--SQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 81 ~~~~-----w--~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++. | .+..+|+|+-||....-.+.+..++++| |.|++--|.
T Consensus 57 ~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKPl 105 (312)
T 3o9z_A 57 EAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKPL 105 (312)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred HHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECCC
Confidence 2210 0 2347999999999999999999999999 467776664
No 106
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.72 E-value=0.021 Score=55.99 Aligned_cols=98 Identities=16% Similarity=0.073 Sum_probs=63.5
Q ss_pred CceEEEEccCh---HHHHHHHHHhcC-CCcEEE-EeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEe
Q psy8544 2 AYKIGINGFGR---IGRLVLREALHR-NTPVVG-INDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQ 76 (364)
Q Consensus 2 ~irVaInG~G~---IGr~vlr~l~~~-~~~iva-Ind~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~ 76 (364)
++||||+|+|+ ||+..++++... ++++|+ |.|. +++....+.+ .||--. .+. +
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~---~~g~~~--~~~--------------~- 69 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI--DPIRGSAFGE---QLGVDS--ERC--------------Y- 69 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS--SHHHHHHHHH---HTTCCG--GGB--------------C-
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC--CHHHHHHHHH---HhCCCc--cee--------------e-
Confidence 47999999999 999998888766 799998 8786 6664433221 111100 000 0
Q ss_pred cCCCCCCCCc----CCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 77 KMKPEEIPWS----QTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 77 ~~~p~~~~w~----~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+.+++-=. +.++|+|+-||....-.+.+...+++|. .|++--|.
T Consensus 70 -~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPl 118 (398)
T 3dty_A 70 -ADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGL-HVVCEKPL 118 (398)
T ss_dssp -SSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEECSCS
T ss_pred -CCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEeCCC
Confidence 011111000 0258999999999999999999999985 66665553
No 107
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.71 E-value=0.011 Score=57.90 Aligned_cols=33 Identities=18% Similarity=0.312 Sum_probs=29.2
Q ss_pred CceEEEEccChHHHHHHHHHhcC----CCcEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR----NTPVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~----~~~ivaInd~ 34 (364)
++||||.|+|.||+.+++.+.++ ++++++|.+.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 48999999999999999999875 4899999885
No 108
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.68 E-value=0.031 Score=49.27 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=27.9
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR 32 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 3899999 999999999999988889888865
No 109
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.61 E-value=0.022 Score=56.29 Aligned_cols=97 Identities=20% Similarity=0.183 Sum_probs=63.2
Q ss_pred CceEEEEccCh---HHHHHHHHHhcC-CCcEEE-EeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEe
Q psy8544 2 AYKIGINGFGR---IGRLVLREALHR-NTPVVG-INDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQ 76 (364)
Q Consensus 2 ~irVaInG~G~---IGr~vlr~l~~~-~~~iva-Ind~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~ 76 (364)
++||||+|+|+ ||+..++++... ++++|+ |.|. +++....+.+ .||.-. .+. +
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~---~~g~~~--~~~--------------~- 94 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS--TPEKAEASGR---ELGLDP--SRV--------------Y- 94 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS--SHHHHHHHHH---HHTCCG--GGB--------------C-
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC--CHHHHHHHHH---HcCCCc--ccc--------------c-
Confidence 47999999999 999988888766 799997 8886 6665433221 111100 000 0
Q ss_pred cCCCCCCCCcC-----CCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 77 KMKPEEIPWSQ-----TGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 77 ~~~p~~~~w~~-----~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.+.+++- .+ .++|+|+-||....-.+.+..++++|. .|++--|-
T Consensus 95 -~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKPl 143 (417)
T 3v5n_A 95 -SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKPL 143 (417)
T ss_dssp -SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESSS
T ss_pred -CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECCC
Confidence 1111110 11 258999999999999999999999984 67776664
No 110
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.60 E-value=0.012 Score=53.51 Aligned_cols=94 Identities=18% Similarity=0.143 Sum_probs=62.3
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
.||+|.|.|.+|+.+++.+... ++++|++-|. |++. .| -.++|.++ ....+..
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~--dp~k----------~g------------~~i~gv~V--~~~~dl~ 134 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGESFELRGFFDV--DPEK----------VG------------RPVRGGVI--EHVDLLP 134 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEES--CTTT----------TT------------CEETTEEE--EEGGGHH
T ss_pred CEEEEECccHHHHHHHHhHhhcCCcEEEEEEeC--CHHH----------Hh------------hhhcCCee--ecHHhHH
Confidence 6899999999999999863322 7889999875 3321 01 11344333 2222332
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK 124 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~ 124 (364)
++ ..+ ++|.|+-|++.....+-+...+++|.+.++.-.|.+
T Consensus 135 el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~~ 175 (211)
T 2dt5_A 135 QR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVV 175 (211)
T ss_dssp HH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred HH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCccc
Confidence 22 234 799999999988767777888889987666656754
No 111
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.51 E-value=0.055 Score=45.60 Aligned_cols=85 Identities=24% Similarity=0.376 Sum_probs=59.5
Q ss_pred CceEEEEcc----ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 2 AYKIGINGF----GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 2 ~irVaInG~----G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
+.+|||+|. |++|+.+++.|.+.+++|..+|-. ++ . +.|.+ ++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~------------~~---------------~--i~G~~--~~-- 60 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN------------YD---------------E--IEGLK--CY-- 60 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT------------CS---------------E--ETTEE--CB--
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCC------------CC---------------e--ECCee--ec--
Confidence 468999998 999999999998888888766532 01 1 13322 22
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCC
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsap 122 (364)
.++++++ ..+|+|+-++......+-+...+++|++.+++..+
T Consensus 61 ~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 61 RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 3455554 26899999998655556666677789998888654
No 112
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.40 E-value=0.025 Score=51.53 Aligned_cols=93 Identities=15% Similarity=0.149 Sum_probs=59.3
Q ss_pred ceEEEEccChHHHHHHHH-HhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGINGFGRIGRLVLRE-ALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~-l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
.||+|.|.|.+|+.+++. .+.. ++++|++-|. |++. .| -.++|.++. ...+.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k----------~g------------~~i~gv~V~--~~~dl 139 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESK----------IG------------TEVGGVPVY--NLDDL 139 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTT----------TT------------CEETTEEEE--EGGGH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHH----------HH------------hHhcCCeee--chhhH
Confidence 689999999999999994 3334 8999999885 3321 01 113443332 22233
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSK 124 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~ 124 (364)
.++- .+ . |+|+-|++.....+-+...+++|.+.++.-.|..
T Consensus 140 ~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~~ 180 (215)
T 2vt3_A 140 EQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPAR 180 (215)
T ss_dssp HHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred HHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCcee
Confidence 2221 12 3 9999999887777778888899998777777754
No 113
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.28 E-value=0.0055 Score=61.13 Aligned_cols=98 Identities=14% Similarity=0.168 Sum_probs=66.9
Q ss_pred CceEEEEcc----ChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEE
Q psy8544 2 AYKIGINGF----GRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVF 75 (364)
Q Consensus 2 ~irVaInG~----G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~ 75 (364)
++||||+|+ |.+|+..++.|.+. +++||+|.|. +++....+.+ .||. . + +.++
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~g~---~-----~--------~~~~ 78 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATIQ---RLKL---S-----N--------ATAF 78 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HTTC---T-----T--------CEEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC---C-----c--------ceee
Confidence 389999999 99999999999876 7999999996 6654332221 1111 0 0 0111
Q ss_pred ecCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCC-----CEEEEeCCC
Q psy8544 76 QKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGA-----KKVIITAPS 123 (364)
Q Consensus 76 ~~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGa-----kkVIIsaps 123 (364)
.+.+++- .+..+|+|+-||......+.+..++++|. |.|++--|.
T Consensus 79 --~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~ 128 (438)
T 3btv_A 79 --PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWAL 128 (438)
T ss_dssp --SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSC
T ss_pred --CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcc
Confidence 1222221 12368999999998888899999999994 678886664
No 114
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.24 E-value=0.11 Score=49.63 Aligned_cols=41 Identities=12% Similarity=0.178 Sum_probs=31.5
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC--cEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT--PVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~--~ivaInd~~~~~~~~a~ll 45 (364)
.+||+|+|+|.||+.+.+.|.+.++ +|++.+ . +++.+..+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~d-r--~~~~~~~a~ 75 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYD-I--NPESISKAV 75 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEEC-S--CHHHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEE-C--CHHHHHHHH
Confidence 3699999999999999999988876 776654 3 566554444
No 115
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.17 E-value=0.011 Score=59.76 Aligned_cols=98 Identities=11% Similarity=0.141 Sum_probs=66.9
Q ss_pred CceEEEEcc----ChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEE
Q psy8544 2 AYKIGINGF----GRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVF 75 (364)
Q Consensus 2 ~irVaInG~----G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~ 75 (364)
++||||+|+ |.+|+..+++|... +++||+|.|. +++....+.+ .||. . . +.++
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~---~-----~--------~~~~ 97 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTIE---QLQL---K-----H--------ATGF 97 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHHH---HTTC---T-----T--------CEEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC---C-----c--------ceee
Confidence 489999999 99999999998875 7999999996 6654332221 1111 0 0 0111
Q ss_pred ecCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCC-----CEEEEeCCC
Q psy8544 76 QKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGA-----KKVIITAPS 123 (364)
Q Consensus 76 ~~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGa-----kkVIIsaps 123 (364)
.+.+++ ..+..+|+|+-||....-.+.+..++++|. |.|++--|.
T Consensus 98 --~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPl 147 (479)
T 2nvw_A 98 --DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL 147 (479)
T ss_dssp --SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCC
Confidence 122221 112369999999998888899999999994 678887664
No 116
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.08 E-value=0.035 Score=48.96 Aligned_cols=31 Identities=35% Similarity=0.447 Sum_probs=28.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+||.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEc
Confidence 6999999 899999999999998889888765
No 117
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.00 E-value=0.041 Score=51.25 Aligned_cols=31 Identities=29% Similarity=0.359 Sum_probs=27.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R 43 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTR 43 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEEC
Confidence 4899999 899999999999988888887765
No 118
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.91 E-value=0.076 Score=52.07 Aligned_cols=90 Identities=18% Similarity=0.253 Sum_probs=58.6
Q ss_pred CceEEEEccChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
++||||+|+| .|+.-++++.+. ++++|+|.|. +++....+-+ .|| + +.+ .+
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~--~~~~a~~~a~---~~g-----v--------------~~~--~~ 59 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ--GSARSRELAH---AFG-----I--------------PLY--TS 59 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC--SSHHHHHHHH---HTT-----C--------------CEE--SS
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC--CHHHHHHHHH---HhC-----C--------------CEE--CC
Confidence 4899999999 699989988765 6999999986 4443222111 111 0 112 23
Q ss_pred CCCCCCcCCCccEEEeecCCCCC----HhhHHHHHhCCCCEEEEeCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKT----KDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s----~e~a~~hl~aGakkVIIsap 122 (364)
.+++. .++|+|+=||...+- .+.+...+++|. .|++--|
T Consensus 60 ~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKP 102 (372)
T 4gmf_A 60 PEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHP 102 (372)
T ss_dssp GGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESC
T ss_pred HHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecC
Confidence 33442 258888888877765 677888999986 5666555
No 119
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.90 E-value=0.11 Score=52.62 Aligned_cols=100 Identities=19% Similarity=0.299 Sum_probs=67.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCC--------CCHHHHHHHhhccccc-ccCCcceeecCCeEEECCEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPH--------LSVDYLAYMLKYDSTH-GRFKGDVKTEGNNIVVNGKKIA 73 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~--------~~~~~~a~ll~ydS~~-g~~~~~v~~~~~~l~i~gk~I~ 73 (364)
.||+|-|||.||+.+++.|.+.+-.||+|.|.. +|++.+..|+++-... |+...- .+. +. +.+
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~---~~~-~~-~a~--- 324 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEY---LNH-SS-TAK--- 324 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGG---GGT-CS-SCE---
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHH---Hhh-cC-CcE---
Confidence 489999999999999999988899999999942 4677777777654322 222111 000 00 111
Q ss_pred EEecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHHHHhCCCC
Q psy8544 74 VFQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASAHLKGGAK 115 (364)
Q Consensus 74 v~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGak 115 (364)
.. +++++ |. ..+||.+-|+ +..++.+.+...++.+||
T Consensus 325 ~v---~~~~~-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak 362 (470)
T 2bma_A 325 YF---PNEKP-WG-VPCTLAFPCATQNDVDLDQAKLLQKNGCI 362 (470)
T ss_dssp EC---SSCCT-TS-SCCSEEEECSSTTCBCSHHHHHHHHTTCC
T ss_pred Ee---cCcCe-ee-cCccEEEeccccCcCCHHHHHHHHhcCcE
Confidence 11 12333 74 6899999997 778888999888778885
No 120
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=94.88 E-value=0.047 Score=50.71 Aligned_cols=33 Identities=21% Similarity=0.405 Sum_probs=29.1
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|++||.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTR 34 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeC
Confidence 778999999 899999999999998888888765
No 121
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.88 E-value=0.11 Score=45.21 Aligned_cols=32 Identities=44% Similarity=0.577 Sum_probs=28.4
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
|||.|.| +|.||+.+++.|.+++.+|+++...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 4899999 8999999999999988899888653
No 122
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.86 E-value=0.04 Score=50.94 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=27.9
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R 36 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFR 36 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEEC
Confidence 6899999 899999999999988888888765
No 123
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=94.83 E-value=0.083 Score=51.98 Aligned_cols=106 Identities=18% Similarity=0.201 Sum_probs=61.7
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhh-cccccccCCcceeecC-CeE--EECCEEEEEEe
Q psy8544 3 YKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLK-YDSTHGRFKGDVKTEG-NNI--VVNGKKIAVFQ 76 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~-ydS~~g~~~~~v~~~~-~~l--~i~gk~I~v~~ 76 (364)
.||+|.| +|.||+..++++.++ +|+|+++.. ..+.+.++...+ |... -+-..+ ... .+. .. +..
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a-~~n~~~l~~q~~~f~p~------~v~v~~~~~~~~~l~-~~--~~G 73 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISF-HSNLELAFKIVKEFNVK------NVAITGDVEFEDSSI-NV--WKG 73 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEE-SSCHHHHHHHHHHHTCC------EEEECSSCCCCCSSS-EE--EES
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEc-cCCHHHHHHHHHHcCCC------EEEEccHHHHHHHHH-HH--ccC
Confidence 5899999 899999999999887 799999943 236776655532 2211 010000 000 000 00 100
Q ss_pred cCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEe
Q psy8544 77 KMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120 (364)
Q Consensus 77 ~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIs 120 (364)
+....++- ....+|+|+.++-.+...+-.-.++++| |+|.+.
T Consensus 74 ~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaLA 115 (376)
T 3a06_A 74 SHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCLA 115 (376)
T ss_dssp TTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEEC
T ss_pred HHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEe
Confidence 00001110 1125899999998888887777888888 455553
No 124
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=94.79 E-value=0.1 Score=44.19 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=59.3
Q ss_pred CceEEEEcc----ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 2 AYKIGINGF----GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 2 ~irVaInG~----G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
+.+|||+|. |++|+.+++.|.+.+++|..+|-- + .+.. +.|. +++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~--------~-----------------~g~~--i~G~--~~~-- 61 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPK--------V-----------------AGKT--LLGQ--QGY-- 61 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSS--------S-----------------TTSE--ETTE--ECC--
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCc--------c-----------------cccc--cCCe--ecc--
Confidence 357999997 899999999988778887766532 0 0111 1342 222
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeC
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITA 121 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsa 121 (364)
.++++++ ..+|+|+-|+......+-+...+++|++.+++..
T Consensus 62 ~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 62 ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3466665 3689999999866555666667778999888864
No 125
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.71 E-value=0.013 Score=53.46 Aligned_cols=95 Identities=18% Similarity=0.272 Sum_probs=62.5
Q ss_pred ceEEEEccChHHHHHHHHHh-cC-CCcEEEEeCCCCCHH-HHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 3 YKIGINGFGRIGRLVLREAL-HR-NTPVVGINDPHLSVD-YLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~-~~-~~~ivaInd~~~~~~-~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
.||+|+|.|..|+.+++.+. ++ ++++|++=|. |++ . .|+ . . ++|- +|....+
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~k----------iG~----~-----~--i~Gv--pV~~~~d 139 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSNDL----------VGK----T-----T--EDGI--PVYGIST 139 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTSTT----------TTC----B-----C--TTCC--BEEEGGG
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchhc----------cCc----e-----e--ECCe--EEeCHHH
Confidence 58999999999999998743 33 8999988775 332 1 111 0 1 2332 2322122
Q ss_pred CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
..++ -.+.++|+++-|++.....+-+....++|.+.+.--+|.
T Consensus 140 L~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 140 INDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp HHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 2211 123579999999988877778888889999887776774
No 126
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.66 E-value=0.033 Score=47.89 Aligned_cols=33 Identities=33% Similarity=0.370 Sum_probs=28.7
Q ss_pred CC-ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MA-YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~-irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|+ ++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 54 6899999 899999999999988888887754
No 127
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.65 E-value=0.026 Score=54.63 Aligned_cols=92 Identities=15% Similarity=0.196 Sum_probs=57.1
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
+|||.|.|.|.||+.+++.|.++ ++.+ .|. +.+.+..+.+.- ..+.+ ...|+
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~---~~~--~~~~~~~~~~~~---------------------~~~~~-d~~d~ 68 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYI---GDV--NNENLEKVKEFA---------------------TPLKV-DASNF 68 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEE---EES--CHHHHHHHTTTS---------------------EEEEC-CTTCH
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEE---EEc--CHHHHHHHhccC---------------------CcEEE-ecCCH
Confidence 47999999999999999998765 4433 343 444443332110 11111 11122
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsap 122 (364)
+.+.=--.++|+|+.|+|.+...+-++..+++|+ -+++.+
T Consensus 69 ~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 69 DKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp HHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred HHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 2111001378999999999988888899999998 455543
No 128
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.64 E-value=0.068 Score=48.88 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=31.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
+||+|+|+|.+|+.+++.|.+.++++|.+-+. +++....+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~--~~~~~~~~ 50 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSR--TEESAREL 50 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECS--SHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeC--CHHHHHHH
Confidence 68999999999999999988777886666664 56554443
No 129
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.58 E-value=0.023 Score=52.21 Aligned_cols=96 Identities=13% Similarity=0.144 Sum_probs=56.4
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
|||.|.| +|.||+.+++.|.++ +.+|+++... ++....+ ....+. +....-.|+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~---~~~~~~~----------------~~~~v~-----~~~~D~~d~ 56 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRN---VEKVPDD----------------WRGKVS-----VRQLDYFNQ 56 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS---GGGSCGG----------------GBTTBE-----EEECCTTCH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC---HHHHHHh----------------hhCCCE-----EEEcCCCCH
Confidence 4899999 899999999999887 8899888653 2110000 001110 101011223
Q ss_pred CCCCCcCCCccEEEeecCCCCC--------HhhHHHHHhCCCCEEEEeCC
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKT--------KDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s--------~e~a~~hl~aGakkVIIsap 122 (364)
+.+.-.-.++|+||.++|.... +..++...++|++++|...+
T Consensus 57 ~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 57 ESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp HHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 2222112389999999986433 23345566789988777433
No 130
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=94.39 E-value=0.061 Score=50.87 Aligned_cols=87 Identities=29% Similarity=0.271 Sum_probs=58.9
Q ss_pred CceEEEEcc-ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGINGF-GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG~-G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
.+||+|.|+ |++|+..++.+.+.++++|+.-++. +. | .. +.|. +++ .+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~----------~~----g----------~~--~~G~--~vy--~sl 56 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPG----------KG----G----------TT--HLGL--PVF--NTV 56 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT----------CT----T----------CE--ETTE--EEE--SSH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCC----------cc----c----------ce--eCCe--ecc--CCH
Confidence 479999995 9999999998877678877554541 00 0 00 2332 233 222
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEE
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVII 119 (364)
++++- +..+|+|+.++......+.+...+++|.+.+|+
T Consensus 57 ~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 57 REAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp HHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred HHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 23321 126899999999988888899999999987444
No 131
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.37 E-value=0.054 Score=50.44 Aligned_cols=101 Identities=19% Similarity=0.191 Sum_probs=56.6
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCC-C--CHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEe
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGINDPH-L--SVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQ 76 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~-~--~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~ 76 (364)
|+++|.|.| +|.||+.+++.|.+++.+|+++.... . +++....+-.... ..++ + +.. .
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~------~~v~-----~------v~~-D 64 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS------MGVT-----I------IEG-E 64 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH------TTCE-----E------EEC-C
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc------CCcE-----E------EEe-c
Confidence 346899999 89999999999998888888776531 0 1222211110000 0010 0 000 0
Q ss_pred cCCCCCCCCcCCCccEEEeecCCC---CCHhhHHHHHhCC-CCEEEE
Q psy8544 77 KMKPEEIPWSQTGAEYIVESTGVF---KTKDTASAHLKGG-AKKVII 119 (364)
Q Consensus 77 ~~~p~~~~w~~~gvDiV~estG~f---~s~e~a~~hl~aG-akkVII 119 (364)
-.+++.+.-.-.++|+||.++|.. ..+..++...++| ++++|.
T Consensus 65 ~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (321)
T 3c1o_A 65 MEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLP 111 (321)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEEC
T ss_pred CCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEec
Confidence 112222211113799999998753 3444556666788 998874
No 132
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.33 E-value=0.15 Score=47.28 Aligned_cols=41 Identities=15% Similarity=0.203 Sum_probs=31.4
Q ss_pred CceEEEEcc-ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGF-GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~-G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
++||+|+|. |.+|+.+++.|.+.+++|+..+. +++....+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r---~~~~~~~~~ 52 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEI---APEGRDRLQ 52 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECC---SHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHH
Confidence 469999998 99999999999888888875543 455544443
No 133
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.29 E-value=0.14 Score=48.07 Aligned_cols=41 Identities=24% Similarity=0.393 Sum_probs=32.4
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
++||+|+|+|.+|+.+.+.|.+.+++|+..+. +++.+..+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr---~~~~~~~~~ 47 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADL---NPQACANLL 47 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHH
Confidence 46899999999999999999888888876643 566554444
No 134
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=94.27 E-value=0.16 Score=42.84 Aligned_cols=84 Identities=25% Similarity=0.256 Sum_probs=59.5
Q ss_pred CceEEEEcc----ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 2 AYKIGINGF----GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 2 ~irVaInG~----G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
+.+|||+|. |++|+.+++.|.+.+++|..+|-- ++ .+.|.+ ++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~------------~~-----------------~i~G~~--~y-- 68 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK------------YE-----------------EVLGRK--CY-- 68 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT------------CS-----------------EETTEE--CB--
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCC------------CC-----------------eECCee--cc--
Confidence 357999997 799999999998888888777531 01 123432 22
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeC
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITA 121 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsa 121 (364)
.++++++ ..+|+|+-++......+-++...++|++.++++.
T Consensus 69 ~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 69 PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3455554 2689999998876666777777889999887763
No 135
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.09 E-value=0.096 Score=43.37 Aligned_cols=40 Identities=25% Similarity=0.404 Sum_probs=32.8
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
.-+|.|.|+|++|+.+++.|.+++.+++.|.. +++.+..+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~ 46 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDEL 46 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHH
Confidence 45799999999999999999988899998864 56655443
No 136
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.06 E-value=0.1 Score=42.16 Aligned_cols=30 Identities=20% Similarity=0.462 Sum_probs=26.1
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|.|.|.+|+.+++.|.+.+.+++.+..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEES
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 699999999999999999888778777654
No 137
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.82 E-value=0.071 Score=49.10 Aligned_cols=100 Identities=16% Similarity=0.242 Sum_probs=56.3
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCC---CHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGINDPHL---SVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~---~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
.+|.|.| +|.||+.+++.|.+++.+|+++..... +++....+-.... ..++ + +.+ .-.
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~------~~v~-----~-v~~------D~~ 66 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA------SGAN-----I-VHG------SID 66 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT------TTCE-----E-ECC------CTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh------CCCE-----E-EEe------ccC
Confidence 6899999 899999999999988888887754311 1332211111000 0011 0 000 001
Q ss_pred CCCCCCCcCCCccEEEeecCCC---CCHhhHHHHHhCC-CCEEEEe
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVF---KTKDTASAHLKGG-AKKVIIT 120 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f---~s~e~a~~hl~aG-akkVIIs 120 (364)
+++.+.-.-.++|+||.++|.. .....++...++| ++++|.|
T Consensus 67 d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S 112 (308)
T 1qyc_A 67 DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPS 112 (308)
T ss_dssp CHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECS
T ss_pred CHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeec
Confidence 2222211113789999998753 2344456666788 9998754
No 138
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=93.75 E-value=0.072 Score=47.68 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=27.4
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCC-CcEEEEeC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRN-TPVVGIND 33 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~-~~ivaInd 33 (364)
+.+|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc
Confidence 45799999 8999999999999886 88877754
No 139
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=93.74 E-value=0.15 Score=42.84 Aligned_cols=87 Identities=13% Similarity=0.063 Sum_probs=59.7
Q ss_pred ceEEEEcc----ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 3 YKIGINGF----GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 3 irVaInG~----G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
-+|||+|. |++|+.+++.|.+++++|..||-- . .++ . +.|. +++ .
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~-----~-----~~~---------------~--i~G~--~~~--~ 62 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR-----F-----QGE---------------E--LFGE--EAV--A 62 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG-----G-----TTS---------------E--ETTE--ECB--S
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCC-----c-----ccC---------------c--CCCE--Eec--C
Confidence 47999996 899999999998888887666531 0 011 1 2343 222 3
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
+.++++ ..+|+|+-++......+-++...++|+|.++++.+.
T Consensus 63 sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g~ 104 (140)
T 1iuk_A 63 SLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGI 104 (140)
T ss_dssp SGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTTC
T ss_pred CHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCCc
Confidence 345554 268999999877655566677778899988887553
No 140
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.68 E-value=0.046 Score=52.96 Aligned_cols=95 Identities=12% Similarity=0.117 Sum_probs=58.8
Q ss_pred CceEEEEc-cChHHHH-HH----HHHhcC-CCcEE---------EEeCCCCCHHHHHHHhhcccccccCCcceeecCCeE
Q psy8544 2 AYKIGING-FGRIGRL-VL----REALHR-NTPVV---------GINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNI 65 (364)
Q Consensus 2 ~irVaInG-~G~IGr~-vl----r~l~~~-~~~iv---------aInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l 65 (364)
++||||+| +|.+|+. .+ +++.+. .++++ +|.|. +++....+.+ .||. .
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~--~~~~a~~~a~---~~~~---~-------- 69 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR--SAEKVEALAK---RFNI---A-------- 69 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS--SSHHHHHHHH---HTTC---C--------
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC--CHHHHHHHHH---HhCC---C--------
Confidence 47999999 9999997 66 666544 34432 57775 5554333221 1110 0
Q ss_pred EECCEEEEEEecCCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 66 VVNGKKIAVFQKMKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 66 ~i~gk~I~v~~~~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps 123 (364)
.++ .+.+++ ..+..+|+|+-||+.....+.+..++++|. .|++--|-
T Consensus 70 -------~~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP~ 116 (383)
T 3oqb_A 70 -------RWT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAGK-HVYCEKPI 116 (383)
T ss_dssp -------CEE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTTC-EEEECSCS
T ss_pred -------ccc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCCC-eEEEcCCC
Confidence 011 112221 012368999999999999999999999984 56665453
No 141
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.68 E-value=0.12 Score=45.27 Aligned_cols=31 Identities=32% Similarity=0.506 Sum_probs=27.9
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 4899999 899999999999998889988865
No 142
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.68 E-value=0.072 Score=50.36 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=57.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCC-CCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEe--cC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGINDPH-LSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQ--KM 78 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~-~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~--~~ 78 (364)
+||.|.| +|.||+.+++.|.+++.+|+++.... .+++....+-...+ ..+ .+.+ -.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~-------------~~v-------~~~~~Dl~ 70 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED-------------KGA-------IIVYGLIN 70 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH-------------TTC-------EEEECCTT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh-------------CCc-------EEEEeecC
Confidence 5899999 89999999999998888888886531 13333322211100 001 1111 01
Q ss_pred CCCCCCC--cCCCccEEEeecCCC---CCHhhHHHHHhCC-CCEEEEe
Q psy8544 79 KPEEIPW--SQTGAEYIVESTGVF---KTKDTASAHLKGG-AKKVIIT 120 (364)
Q Consensus 79 ~p~~~~w--~~~gvDiV~estG~f---~s~e~a~~hl~aG-akkVIIs 120 (364)
|++.+.- .+.++|+||.++|.. .+...++...++| ++++|.|
T Consensus 71 d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S 118 (346)
T 3i6i_A 71 EQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPS 118 (346)
T ss_dssp CHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECS
T ss_pred CHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeec
Confidence 2222211 112899999998753 1234445566778 9998764
No 143
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.26 E-value=0.076 Score=48.61 Aligned_cols=33 Identities=30% Similarity=0.433 Sum_probs=28.6
Q ss_pred CC-ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MA-YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~-irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|+ +||.|.|.|.||+.+++.|.+++.+|+++..
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 53 6899999999999999999988889988865
No 144
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=93.25 E-value=0.22 Score=41.25 Aligned_cols=83 Identities=16% Similarity=0.071 Sum_probs=61.7
Q ss_pred ceEEEEcc----ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecC
Q psy8544 3 YKIGINGF----GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKM 78 (364)
Q Consensus 3 irVaInG~----G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~ 78 (364)
-+|||+|. +++|..+++.|.+++++|..||-- ++. +.|.+ . -.
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~------------~~~-----------------i~G~~--~--y~ 51 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRK------------KGE-----------------VLGKT--I--IN 51 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSS------------CSE-----------------ETTEE--C--BC
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCC------------CCc-----------------CCCee--c--cC
Confidence 36999993 889999999998888899888842 121 23322 1 24
Q ss_pred CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCC
Q psy8544 79 KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 79 ~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsap 122 (364)
+.++++ . +|+|+-++......+..+...+.|+|.|+++..
T Consensus 52 sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 52 ERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp SCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred ChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 566776 3 899999998877777778888899998887654
No 145
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=93.22 E-value=0.15 Score=51.07 Aligned_cols=94 Identities=22% Similarity=0.392 Sum_probs=52.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCC-------------CCHHHHHHHhhcccccccCCcceeecCCeEEECC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPH-------------LSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNG 69 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~-------------~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~g 69 (364)
.||+|-|||-||+.+++.|.+.+..||+|.|.. .|++.+..+.+ .+|+... +.+ .
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~---~~g~i~~---~~~------a 280 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKE---ANKTLIG---FPG------A 280 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHH---HHCC----------------
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHH---hcCCccc---CCC------c
Confidence 589999999999999999998899999999974 13444433321 1222111 000 1
Q ss_pred EEEEEEecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHHHHhCCCCEEEEe
Q psy8544 70 KKIAVFQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASAHLKGGAKKVIIT 120 (364)
Q Consensus 70 k~I~v~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGakkVIIs 120 (364)
+.+ +++++ |. ..+|+.+.|+ +..++.+.+..+ +|| +|+.
T Consensus 281 ~~i------~~~~~-~~-~~~DIliP~A~~n~i~~~~A~~l---~ak-~VvE 320 (421)
T 2yfq_A 281 ERI------TDEEF-WT-KEYDIIVPAALENVITGERAKTI---NAK-LVCE 320 (421)
T ss_dssp ----------------------CEEECSCSSCSCHHHHTTC---CCS-EEEC
T ss_pred eEe------Cccch-hc-CCccEEEEcCCcCcCCcccHHHc---CCe-EEEe
Confidence 111 12233 65 5799999997 666777766543 564 3443
No 146
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.14 E-value=0.25 Score=49.86 Aligned_cols=100 Identities=15% Similarity=0.332 Sum_probs=63.9
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCC--------CCHHHHHHHhhcccccc-cCCcceeecCCeEEECCEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPH--------LSVDYLAYMLKYDSTHG-RFKGDVKTEGNNIVVNGKKIA 73 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~--------~~~~~~a~ll~ydS~~g-~~~~~v~~~~~~l~i~gk~I~ 73 (364)
.||+|-|||.||+.+++.|.+.+-.||+|.|.. .|++.+..+.++...++ +...-+... .+.+.+
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~-----~~a~~v- 313 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYS-----KTAKYF- 313 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTC-----SSCEEE-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcC-----CCceEe-
Confidence 479999999999999999988788888888842 46777666554332221 111000000 011211
Q ss_pred EEecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHHHHhCCCC
Q psy8544 74 VFQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASAHLKGGAK 115 (364)
Q Consensus 74 v~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGak 115 (364)
++++ .|. ..+||.+=|+ +..++.+.++.-.+.+||
T Consensus 314 -----~~~~-i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak 349 (456)
T 3r3j_A 314 -----ENQK-PWN-IPCDIAFPCATQNEINENDADLFIQNKCK 349 (456)
T ss_dssp -----CSCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC
T ss_pred -----CCcc-ccc-cCccEEEeCCCccchhhHHHHHHHhcCCe
Confidence 1223 265 4799999986 778888888876666784
No 147
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=93.11 E-value=0.16 Score=46.81 Aligned_cols=160 Identities=19% Similarity=0.163 Sum_probs=89.9
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
+|-.|+| +||+||.+.+++.++++++|+.-|.. + + +
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~id~~------------~--------~-----------------------~ 49 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN------------G--------V-----------------------E 49 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT------------E--------E-----------------------E
T ss_pred ceeEEEEecCHHHHHHHHHHhCCCCEEEEEEcCC------------C--------c-----------------------c
Confidence 6889999 79999999988766699998774430 0 0 1
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCCCCC-CCeEEcccCccccCCCCCeEecCCchh--hhHHhH
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAPSKD-APMFVCGVNLDKYDPSHSVVSNASCTT--NCLAPL 158 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsaps~d-~p~vV~gVN~~~~~~~~~IISnaSCTT--n~Lap~ 158 (364)
++. ++|+|||-|-.....+.++..++.|..-||=|....+ ..-.+ +.+.....++-.||=+. |-|.-+
T Consensus 50 ~l~----~~DVvIDFT~P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l-----~~~a~~~~vv~apNfSlGvnll~~l 120 (228)
T 1vm6_A 50 ELD----SPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTALKEEHLQML-----RELSKEVPVVQAYNFSIGINVLKRF 120 (228)
T ss_dssp ECS----CCSEEEECSCGGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHH-----HHHTTTSEEEECSCCCHHHHHHHHH
T ss_pred ccc----CCCEEEECCCHHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHH-----HHHHhhCCEEEeccccHHHHHHHHH
Confidence 111 4799998887777888888888888854332322221 00000 00111234555555543 444444
Q ss_pred HHHHhhhcCeeEEEEEeeeccccchhhhcCCCcccccccccccceeecCCCChHHHHHHHccCCCCceeeEEEeceeccc
Q psy8544 159 AKVIHDNFEILEGLMTTVHAVTATQKTVDAPSKKMWRDGRGANQNIIPASTGAAKAVAKVIPDLEGKLTGMAFRVPVPNV 238 (364)
Q Consensus 159 lk~L~d~fGI~~~~~TTvha~t~~q~~~D~~~~~d~r~~r~~a~NIIP~~tGaak~~~kVlPeL~gki~~~avRVPv~~g 238 (364)
++.+-+.|.==.+.+.-.|-- + -+|.|+ |.|..+.+.++ ..+--.++|.|-.-+
T Consensus 121 ~~~aA~~l~~ydiEIiE~HH~---~-K~DAPS-------------------GTAl~lae~i~---~~I~i~svR~g~ivg 174 (228)
T 1vm6_A 121 LSELVKVLEDWDVEIVETHHR---F-KKDAPS-------------------GTAILLESALG---KSVPIHSLRVGGVPG 174 (228)
T ss_dssp HHHHHHHTTTSEEEEEEEECT---T-CCCSSC-------------------HHHHHHHHHTT---SCCCEEEEECTTCCC
T ss_pred HHHHHHhcCCCCEEEEEcCCC---C-CCCCCC-------------------HHHHHHHHhcc---cCCCEEEEECCCCcE
Confidence 444333331002233334421 1 134443 56666777664 346668889887666
Q ss_pred eE
Q psy8544 239 SV 240 (364)
Q Consensus 239 s~ 240 (364)
+-
T Consensus 175 ~H 176 (228)
T 1vm6_A 175 DH 176 (228)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 148
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=93.01 E-value=0.27 Score=49.02 Aligned_cols=93 Identities=22% Similarity=0.331 Sum_probs=58.5
Q ss_pred ceEEEEccChHHHHHHHHHhc-CCCcEEEEeCCC--------CCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALH-RNTPVVGINDPH--------LSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIA 73 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~-~~~~ivaInd~~--------~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~ 73 (364)
.+|+|.|||-||+.+++.|.+ .+..||+|.|.. .|++.+..+.. .+|++..- .+ .+.+
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~---~~g~l~~y---~~------a~~~- 276 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKK---EHGTVVTY---PK------GERI- 276 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHH---HSSCSTTC---SS------SEEE-
T ss_pred CEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHH---hhCCcccC---CC------ceEc-
Confidence 589999999999999999998 799999999862 25654443332 22332210 01 1111
Q ss_pred EEecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHHHHhCCCCEEEE
Q psy8544 74 VFQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 74 v~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGakkVII 119 (364)
+++++ |. ..+|+++.|+ +..++.+.+.. -+|| +|+
T Consensus 277 -----~~~ei-l~-~~~DIliP~A~~n~i~~~~a~~---l~ak-~V~ 312 (415)
T 2tmg_A 277 -----TNEEL-LE-LDVDILVPAALEGAIHAGNAER---IKAK-AVV 312 (415)
T ss_dssp -----CHHHH-TT-CSCSEEEECSSTTSBCHHHHTT---CCCS-EEE
T ss_pred -----Cchhh-hc-CCCcEEEecCCcCccCcccHHH---cCCe-EEE
Confidence 12222 54 5799999997 66677666653 3564 344
No 149
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.91 E-value=0.46 Score=45.03 Aligned_cols=74 Identities=16% Similarity=0.090 Sum_probs=48.9
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEE 82 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~ 82 (364)
.||||+|.|.+|..+++.+. .+++|+..+- +++.+..+.++ + .+..+ .+ ++.. .+++.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~---~~~~~~~~~~~------l------~~~~~--~~--i~~~--~~~~~ 70 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDV---SEKALEAAREQ------I------PEELL--SK--IEFT--TTLEK 70 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECS---CHHHHHHHHHH------S------CGGGG--GG--EEEE--SSCTT
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEEC---CHHHHHHHHHH------H------HHHHh--CC--eEEe--CCHHH
Confidence 58999999999999999999 9899877653 57766666543 1 00000 01 2222 34443
Q ss_pred CCCcCCCccEEEeecCCCCC
Q psy8544 83 IPWSQTGAEYIVESTGVFKT 102 (364)
Q Consensus 83 ~~w~~~gvDiV~estG~f~s 102 (364)
+ .++|+||||......
T Consensus 71 ~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 71 V----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp G----GGCSEEEECCCSCHH
T ss_pred H----cCCCEEEEcCcCCHH
Confidence 3 379999999976543
No 150
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.82 E-value=0.34 Score=44.74 Aligned_cols=40 Identities=23% Similarity=0.195 Sum_probs=29.4
Q ss_pred CceEEEEccChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHH
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~l 44 (364)
++||+|+|+|.+|+.+.+.|.+. +.+|+.. |. +++....+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~-d~--~~~~~~~~ 47 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGY-NR--SDRSRDIA 47 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEE-CS--SHHHHHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEE-cC--CHHHHHHH
Confidence 46999999999999999998765 5676554 43 45554443
No 151
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.76 E-value=0.65 Score=41.07 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=28.4
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC
Confidence 36899999 899999999999998888888765
No 152
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=92.72 E-value=0.072 Score=49.02 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=27.6
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R 34 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVR 34 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEEC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEEC
Confidence 35899999 899999999999888788877754
No 153
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=92.67 E-value=0.57 Score=43.15 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=26.6
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEe
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+||.|.| +|.||+.+++.|.+++.+++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEe
Confidence 36899999 89999999999998877876653
No 154
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.47 E-value=0.082 Score=50.28 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=26.1
Q ss_pred CCceEEEEccChHHHHHHHHHhcCC-CcEEEEeCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRN-TPVVGINDP 34 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~-~~ivaInd~ 34 (364)
|++||+|.|.|.||..++..+...+ ++ +.+-|.
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di 34 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKELGD-IVLLDI 34 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeC
Confidence 6789999999999999998887775 47 555564
No 155
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=92.32 E-value=0.081 Score=46.57 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=27.4
Q ss_pred Cce-EEEEc-cChHHHHHHHHHh-cCCCcEEEEeC
Q psy8544 2 AYK-IGING-FGRIGRLVLREAL-HRNTPVVGIND 33 (364)
Q Consensus 2 ~ir-VaInG-~G~IGr~vlr~l~-~~~~~ivaInd 33 (364)
++| |.|.| +|.||+.+++.|. +++.+|+++..
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGR 38 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEec
Confidence 356 99999 8999999999999 67889887764
No 156
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.20 E-value=0.26 Score=40.32 Aligned_cols=39 Identities=18% Similarity=0.275 Sum_probs=31.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
.+|.|.|+|++|+.+++.|.+++.+++.+.. +++.+..+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~ 45 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELL 45 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHH
Confidence 4799999999999999999988889988854 56654443
No 157
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.19 E-value=0.72 Score=43.40 Aligned_cols=32 Identities=31% Similarity=0.309 Sum_probs=26.9
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|++||+|.|.|.+|..+...|. .+.+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cCCceEEEEC
Confidence 7899999999999999999988 7777776654
No 158
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.86 E-value=0.096 Score=53.18 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=32.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
.||||+|.|.+|..++..+...+++|+.. |. +++.+..+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~-D~--~~e~l~~~~ 45 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLY-DI--SAEALTRAI 45 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEE-CS--CHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEE-EC--CHHHHHHHH
Confidence 38999999999999999998888887765 43 676665554
No 159
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=91.85 E-value=0.59 Score=46.98 Aligned_cols=93 Identities=19% Similarity=0.359 Sum_probs=58.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCC--------CCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPH--------LSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAV 74 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~--------~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v 74 (364)
.||+|-|||-||+.+++.|.+.+..||+|.|.. .|++.+..+.+ .+|.+.. ..+ .+.+
T Consensus 236 ~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~---~~g~i~~---y~~------a~~i-- 301 (440)
T 3aog_A 236 ARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQ---EFGGVRG---YPK------AEPL-- 301 (440)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHH---HTSSSTT---CTT------SEEC--
T ss_pred CEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHH---hcCCccc---CCC------ceEc--
Confidence 589999999999999999999899999999862 25665444332 2333211 111 1111
Q ss_pred EecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHHHHhCCCCEEEE
Q psy8544 75 FQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 75 ~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGakkVII 119 (364)
+++++ |. ..+|+++.|+ +..++.+.+.. -+|| +|+
T Consensus 302 ----~~~ei-~~-~~~DIlvPcA~~n~i~~~na~~---l~ak-~Vv 337 (440)
T 3aog_A 302 ----PAADF-WG-LPVEFLVPAALEKQITEQNAWR---IRAR-IVA 337 (440)
T ss_dssp ----CHHHH-TT-CCCSEEEECSSSSCBCTTTGGG---CCCS-EEE
T ss_pred ----Cchhh-hc-CCCcEEEecCCcCccchhhHHH---cCCc-EEE
Confidence 11222 64 5799999997 55666666654 2564 344
No 160
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=91.77 E-value=0.17 Score=47.86 Aligned_cols=87 Identities=18% Similarity=0.215 Sum_probs=57.6
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
.+||+|.| +|+.|+.+++.+.+.++++++--++. + .+.. +.|. +++ .+.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~-------~-----------------~g~~--i~G~--~vy--~sl 56 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPG-------K-----------------GGME--VLGV--PVY--DTV 56 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT-------C-----------------TTCE--ETTE--EEE--SSH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCC-------C-----------------CCce--ECCE--Eee--CCH
Confidence 36999999 59999999998877788876433331 0 0011 2342 333 222
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEE
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVII 119 (364)
++++- +..+|+++.++......+.+...+++|.+.+|+
T Consensus 57 ~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 57 KEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp HHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22321 126899999998888888888889999986555
No 161
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=91.73 E-value=0.35 Score=48.69 Aligned_cols=100 Identities=19% Similarity=0.350 Sum_probs=64.3
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCC--------CCHHHHHHHhhcc-cccccCCcceeecCCeEEECCEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPH--------LSVDYLAYMLKYD-STHGRFKGDVKTEGNNIVVNGKKIA 73 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~--------~~~~~~a~ll~yd-S~~g~~~~~v~~~~~~l~i~gk~I~ 73 (364)
.||+|-|||.||..+++.|.+.+-.||++.|.. .|.+.+.++++.. +..|+...-.+ + ++.+.
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~-~-----~g~~~-- 307 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAK-E-----FGLVY-- 307 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHH-H-----HTCEE--
T ss_pred CEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccc-c-----CCcEE--
Confidence 589999999999999999998888999987642 4666766665421 11111110000 0 01111
Q ss_pred EEecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHHHHhCCCCE
Q psy8544 74 VFQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASAHLKGGAKK 116 (364)
Q Consensus 74 v~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGakk 116 (364)
+ . +++ .|. ..+||.+=|+ +..++.+.++.-.+.|+|-
T Consensus 308 ~-~---~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 308 L-E---GQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp E-E---TCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred e-c---Ccc-ccc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 1 1 222 265 5899999886 7788989898777778853
No 162
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=91.73 E-value=0.25 Score=46.04 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=27.8
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 5899999 899999999999988888888764
No 163
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=91.56 E-value=0.44 Score=47.62 Aligned_cols=86 Identities=22% Similarity=0.276 Sum_probs=56.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCC--------CCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDP--------HLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAV 74 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~--------~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v 74 (364)
.+|+|-|||-||+.+++.|.+.+..||+|.|. ..|++.+..+.+ .+|...+ . .+
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~---~~g~v~~-------~--------~~ 280 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYE---ATGSLPR-------L--------DL 280 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHH---HHSSCSC-------C--------CB
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHH---hhCCcce-------e--------ec
Confidence 58999999999999999999889999999986 125555444332 1222110 0 01
Q ss_pred EecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHHHHhCCCC
Q psy8544 75 FQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASAHLKGGAK 115 (364)
Q Consensus 75 ~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGak 115 (364)
.++++ |. ..+|+.+.|+ +..++.+.++. -+||
T Consensus 281 ----~~~e~-~~-~~~DVliP~A~~n~i~~~~A~~---l~ak 313 (419)
T 3aoe_E 281 ----APEEV-FG-LEAEVLVLAAREGALDGDRARQ---VQAQ 313 (419)
T ss_dssp ----CTTTG-GG-SSCSEEEECSCTTCBCHHHHTT---CCCS
T ss_pred ----cchhh-hc-cCceEEEecccccccccchHhh---CCce
Confidence 12233 65 5899999997 55666665543 3564
No 164
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=91.38 E-value=0.17 Score=51.01 Aligned_cols=99 Identities=13% Similarity=0.263 Sum_probs=66.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCC--------C-CHHHHHHHhhccccc-ccCCcceeecCCeEEECCEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPH--------L-SVDYLAYMLKYDSTH-GRFKGDVKTEGNNIVVNGKKI 72 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~--------~-~~~~~a~ll~ydS~~-g~~~~~v~~~~~~l~i~gk~I 72 (364)
.+|+|-|||-||+.+++.|.+.+..||+|.|.. + |++.+..|+.|-..+ |.+..- .+ .+ +.+.+
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y---~~-~~--~a~~i 304 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY---AD-KF--GVQFF 304 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHH---HH-HH--TCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhc---cc-cc--CCEEe
Confidence 489999999999999999988899999998831 2 555556666554322 222111 00 01 12222
Q ss_pred EEEecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHHHHhCCCC
Q psy8544 73 AVFQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASAHLKGGAK 115 (364)
Q Consensus 73 ~v~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGak 115 (364)
. ++++ |. ..+|+.+-|+ +..++.+.++.....|||
T Consensus 305 ---~---~~e~-~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~k 340 (449)
T 1bgv_A 305 ---P---GEKP-WG-QKVDIIMPCATQNDVDLEQAKKIVANNVK 340 (449)
T ss_dssp ---E---TCCG-GG-SCCSEEECCSCTTCBCHHHHHHHHHTTCC
T ss_pred ---C---chhh-hc-CCcceeeccccccccchhhHHHHHhcCCe
Confidence 1 2233 74 6899999987 778899999887777885
No 165
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.21 E-value=0.22 Score=40.03 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=29.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYL 41 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~ 41 (364)
++|+|.|+|.+|+.+++.|.+.+.+++.+.. +++..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~---~~~~~ 40 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDI---DKDIC 40 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHH
Confidence 5899999999999999999888888887754 45544
No 166
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.16 E-value=0.15 Score=47.18 Aligned_cols=40 Identities=25% Similarity=0.408 Sum_probs=29.6
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHH
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAY 43 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ 43 (364)
|++||+|+|+|.+|+.+++.|...+.+|... |. +++....
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~-~~--~~~~~~~ 43 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVS-DR--NPEAIAD 43 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEE-CS--CHHHHHH
T ss_pred ccceEEEECchHHHHHHHHHHHhCCCEEEEE-eC--CHHHHHH
Confidence 6689999999999999999998877787554 43 4554433
No 167
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.07 E-value=0.31 Score=44.15 Aligned_cols=42 Identities=21% Similarity=0.367 Sum_probs=32.4
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCC----cEEEEeCCCCCHHHHHHHh
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNT----PVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~----~ivaInd~~~~~~~~a~ll 45 (364)
|++||+|+|+|.+|+.+++.|.+.++ +|... |. +++.+..+.
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~-~r--~~~~~~~~~ 46 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICS-DL--NTANLKNAS 46 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEE-CS--CHHHHHHHH
T ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEE-eC--CHHHHHHHH
Confidence 77899999999999999999988776 76655 43 566554443
No 168
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=91.05 E-value=0.19 Score=48.24 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=27.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr 170 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSR 170 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcC
Confidence 5899999999999999999877999977754
No 169
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.88 E-value=0.17 Score=45.32 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=30.3
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDY 40 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~ 40 (364)
++||+|+|.|.+|+.+++.|.+.+.+++.+.+. +++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r--~~~~ 59 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSR--GPAS 59 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTT--CGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC--CHHH
Confidence 479999999999999999998888888775554 4443
No 170
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.73 E-value=0.28 Score=43.45 Aligned_cols=39 Identities=26% Similarity=0.182 Sum_probs=32.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
|||.|.|+|++|+.+++.|.+++.+++.|.. +++....+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~l 39 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINK---DRELCEEF 39 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEES---CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHH
Confidence 4899999999999999999988889988864 56654333
No 171
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=90.64 E-value=0.053 Score=50.05 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=27.4
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCC-CcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRN-TPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~-~~ivaInd 33 (364)
.+|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEc
Confidence 6899999 8999999999998875 89988765
No 172
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.63 E-value=0.28 Score=40.95 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=27.9
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
-+|.|.|+|++|+.+++.|.+++.+++.|..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISN 34 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 5799999999999999999888889988865
No 173
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.56 E-value=0.21 Score=48.54 Aligned_cols=31 Identities=32% Similarity=0.434 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|.+.+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr 204 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNR 204 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECC
Confidence 4899999999999999999877999877654
No 174
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=90.50 E-value=0.52 Score=44.76 Aligned_cols=43 Identities=16% Similarity=0.219 Sum_probs=34.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHHhh
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYMLK 46 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~-~ivaInd~~~~~~~~a~ll~ 46 (364)
|||.|.| +|.||+.+++.|.+++. +|+.+.- ..|++.+..+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~-~~d~~~l~~~~~ 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR-QTKEEELESALL 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT-TCCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC-CCCHHHHHHHhc
Confidence 4899999 99999999999998854 8877754 137777766664
No 175
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=90.49 E-value=0.76 Score=45.95 Aligned_cols=89 Identities=24% Similarity=0.313 Sum_probs=55.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCC--------CCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPH--------LSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAV 74 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~--------~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v 74 (364)
.||+|-|||.||+.+++.|.+.+..||+|.|.. .|++.+..+ -..+|+..+- ..+.+
T Consensus 222 ~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~---~~~~g~i~~~----------~a~~~-- 286 (424)
T 3k92_A 222 ARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDK---RDSFGMVTNL----------FTDVI-- 286 (424)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHH---CCSSSCCGGG----------CSCCB--
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHH---HHHhCCCCCC----------CcEEe--
Confidence 589999999999999999988889999999973 235544332 2223332110 01100
Q ss_pred EecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHHHHhCCCC
Q psy8544 75 FQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASAHLKGGAK 115 (364)
Q Consensus 75 ~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~hl~aGak 115 (364)
+++++ |. ..+||.+-|+ +..++.+.++. -+||
T Consensus 287 ----~~~~i-~~-~~~DIliPcA~~n~I~~~~a~~---l~ak 319 (424)
T 3k92_A 287 ----TNEEL-LE-KDCDILVPAAISNQITAKNAHN---IQAS 319 (424)
T ss_dssp ----CHHHH-HH-SCCSEEEECSCSSCBCTTTGGG---CCCS
T ss_pred ----cCccc-ee-ccccEEeecCcccccChhhHhh---cCce
Confidence 11122 54 4789999997 55666666654 2564
No 176
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=90.44 E-value=0.21 Score=48.03 Aligned_cols=31 Identities=29% Similarity=0.437 Sum_probs=27.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr 168 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNT 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECC
Confidence 4799999999999999999877999987764
No 177
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=90.43 E-value=0.21 Score=48.22 Aligned_cols=31 Identities=29% Similarity=0.356 Sum_probs=27.3
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~ 172 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDV 172 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECC
Confidence 4899999999999999999877999877754
No 178
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=90.42 E-value=1.8 Score=44.02 Aligned_cols=85 Identities=15% Similarity=0.219 Sum_probs=54.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCC--------CCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDP--------HLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAV 74 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~--------~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v 74 (364)
.+|+|-|||.||+.+++.|.+.+-.||+|.|. .+|++.+..+.. .+|.... .. +.+.+
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~---~~g~i~~---~~------~a~~~-- 310 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKL---QHGTILG---FP------KAKIY-- 310 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHH---HHSSSTT---CT------TSEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHH---hcCCeec---cc------Cceee--
Confidence 47999999999999999998888999999773 246665544321 2333221 00 11211
Q ss_pred EecCCCCCCCCcCCCccEEEeec-CCCCCHhhHHH
Q psy8544 75 FQKMKPEEIPWSQTGAEYIVEST-GVFKTKDTASA 108 (364)
Q Consensus 75 ~~~~~p~~~~w~~~gvDiV~est-G~f~s~e~a~~ 108 (364)
. .+ .|. ..+||.+-|+ +..++.+.++.
T Consensus 311 -~----~~-il~-~~~DIliPcA~~n~I~~~na~~ 338 (501)
T 3mw9_A 311 -E----GS-ILE-VDCDILIPAASEKQLTKSNAPR 338 (501)
T ss_dssp -C----SC-GGG-SCCSEEEECSSSCCBCTTTGGG
T ss_pred -c----cc-ccc-ccceEEeeccccCccCHhHHHH
Confidence 1 11 254 4799999986 66666666653
No 179
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.27 E-value=0.16 Score=48.79 Aligned_cols=33 Identities=30% Similarity=0.286 Sum_probs=26.4
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCC-cEEEEeCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNT-PVVGINDP 34 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~-~ivaInd~ 34 (364)
|++||+|.|.|.+|..++..+...++ + |.+-|.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di 46 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDI 46 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 34699999999999999988887765 7 555565
No 180
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=90.25 E-value=0.23 Score=49.51 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=29.8
Q ss_pred ceEEEEccChHHHHHHHHHhc-CCCcEEEEeCC
Q psy8544 3 YKIGINGFGRIGRLVLREALH-RNTPVVGINDP 34 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~-~~~~ivaInd~ 34 (364)
.+|+|.|||+||+.+++.|.+ .++.|++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 479999999999999999999 79999999886
No 181
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.14 E-value=0.42 Score=45.42 Aligned_cols=81 Identities=16% Similarity=0.286 Sum_probs=50.6
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCCC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEEI 83 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~~ 83 (364)
+|.|+|.|.||...++++...+.+|+++... .+.+.++.++ |. +.+ + .+++.+
T Consensus 179 ~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~l----Ga---------~~v---------~--~~~~~~ 231 (348)
T 3two_A 179 KVGVAGFGGLGSMAVKYAVAMGAEVSVFARN---EHKKQDALSM----GV---------KHF---------Y--TDPKQC 231 (348)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSS---STTHHHHHHT----TC---------SEE---------E--SSGGGC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHhc----CC---------Cee---------c--CCHHHH
Confidence 6899999999999999888777788877532 2333233321 10 111 1 122222
Q ss_pred CCcCCCccEEEeecCCCCCHhhHHHHHhCCC
Q psy8544 84 PWSQTGAEYIVESTGVFKTKDTASAHLKGGA 114 (364)
Q Consensus 84 ~w~~~gvDiV~estG~f~s~e~a~~hl~aGa 114 (364)
. .++|+||||+|.....+.+-..++.|-
T Consensus 232 --~-~~~D~vid~~g~~~~~~~~~~~l~~~G 259 (348)
T 3two_A 232 --K-EELDFIISTIPTHYDLKDYLKLLTYNG 259 (348)
T ss_dssp --C-SCEEEEEECCCSCCCHHHHHTTEEEEE
T ss_pred --h-cCCCEEEECCCcHHHHHHHHHHHhcCC
Confidence 2 289999999998766655555555444
No 182
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=90.11 E-value=0.23 Score=47.87 Aligned_cols=31 Identities=26% Similarity=0.399 Sum_probs=27.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr 171 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSR 171 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcC
Confidence 4899999999999999999877899876653
No 183
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=90.08 E-value=0.23 Score=47.22 Aligned_cols=30 Identities=27% Similarity=0.360 Sum_probs=26.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|||+|+|+||+.+.+.|...+++|++.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEC
Confidence 489999999999999999987788886654
No 184
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.04 E-value=0.24 Score=47.64 Aligned_cols=31 Identities=29% Similarity=0.521 Sum_probs=26.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~ 177 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDV 177 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECC
Confidence 4899999999999999999877888876643
No 185
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=89.98 E-value=0.24 Score=48.16 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~ 179 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDV 179 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECC
Confidence 4799999999999999999877999877754
No 186
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=89.82 E-value=0.25 Score=47.71 Aligned_cols=30 Identities=30% Similarity=0.400 Sum_probs=26.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|||+|+|+||+.+.+.+...+++|++.+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d 171 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecC
Confidence 379999999999999999987789987664
No 187
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=89.77 E-value=0.25 Score=47.55 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=26.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~ 176 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDP 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECC
Confidence 4799999999999999999877889876653
No 188
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=89.71 E-value=0.27 Score=47.52 Aligned_cols=31 Identities=32% Similarity=0.508 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~ 196 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDP 196 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECC
Confidence 4899999999999999999877899887754
No 189
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=89.63 E-value=0.26 Score=47.92 Aligned_cols=31 Identities=29% Similarity=0.407 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~ 191 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGR 191 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECC
Confidence 4899999999999999999877999877753
No 190
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.60 E-value=0.26 Score=47.98 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=27.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr 195 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDR 195 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCC
Confidence 4899999999999999999877899877654
No 191
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.58 E-value=0.3 Score=46.33 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=28.0
Q ss_pred CCceEEEEccChHHHHHHHHHhcCC-CcEEEEe
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRN-TPVVGIN 32 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~-~~ivaIn 32 (364)
|++||||+|+|.+|..+.+.|.+.+ .+|+..+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~d 55 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYD 55 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEe
Confidence 5679999999999999999998888 8887665
No 192
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=89.54 E-value=0.2 Score=49.35 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=55.5
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CC-cEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NT-PVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~-~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
+||+|.|.|.||+.+++.|.++ ++ ..|.+.+. +.+....+.+ .++... +..+. .+.+ ...++
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r--~~~~~~~la~---~l~~~~------~~~~~----~~~~-D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR--TLSKCQEIAQ---SIKAKG------YGEID----ITTV-DADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES--CHHHHHHHHH---HHHHTT------CCCCE----EEEC-CTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC--CHHHHHHHHH---Hhhhhc------CCceE----EEEe-cCCCH
Confidence 5999999999999999999887 55 34445443 4544333321 000000 00010 0000 00111
Q ss_pred CCCC--CcCCCccEEEeecCCCCCHhhHHHHHhCCCCE
Q psy8544 81 EEIP--WSQTGAEYIVESTGVFKTKDTASAHLKGGAKK 116 (364)
Q Consensus 81 ~~~~--w~~~gvDiV~estG~f~s~e~a~~hl~aGakk 116 (364)
+++. ..+.++|+||.|+|.+...+.+...+++|+.-
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~v 103 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPY 103 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCE
Confidence 1111 11114899999999988777888889999853
No 193
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.53 E-value=0.73 Score=46.50 Aligned_cols=30 Identities=13% Similarity=0.042 Sum_probs=26.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.||||+|.|.+|..++..+...+++|+..+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D 84 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVV 84 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 489999999999999999988889987664
No 194
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=89.50 E-value=0.53 Score=45.97 Aligned_cols=31 Identities=16% Similarity=0.371 Sum_probs=28.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
.+|+|.|||.||+.+++.|.+.+..|+ +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEE-EEeC
Confidence 479999999999999999988899988 7786
No 195
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=89.45 E-value=0.27 Score=48.18 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=26.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~ 207 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDP 207 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECC
Confidence 4899999999999999998766899877653
No 196
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.43 E-value=2 Score=39.99 Aligned_cols=31 Identities=29% Similarity=0.413 Sum_probs=27.1
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r 51 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRTQGRTVRGFDL 51 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeC
Confidence 6899999 899999999999988889887754
No 197
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.43 E-value=1 Score=42.06 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=25.8
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC--cEEEEe
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT--PVVGIN 32 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~--~ivaIn 32 (364)
++||+|.|.|.||..+...|...+. +|+.+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d 39 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLED 39 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 4799999999999999998887766 776553
No 198
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=89.34 E-value=0.24 Score=47.65 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=26.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~ 176 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEA 176 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECC
Confidence 4899999999999999998766899877654
No 199
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.32 E-value=0.64 Score=47.35 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=25.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|+|.|+|.||+.+++.+...+.+|++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEe
Confidence 479999999999999999987788876664
No 200
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=89.30 E-value=0.3 Score=47.35 Aligned_cols=30 Identities=30% Similarity=0.372 Sum_probs=26.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|||+|+|+||+.+++.|...+++|++.+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d 198 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYD 198 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEC
Confidence 479999999999999999987788987664
No 201
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=89.26 E-value=0.31 Score=47.25 Aligned_cols=30 Identities=33% Similarity=0.424 Sum_probs=26.3
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|||+|+|+||+.+++.|...+++|.+.+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~d 201 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWN 201 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 589999999999999999987788886654
No 202
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=89.25 E-value=0.31 Score=46.56 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~ 177 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDT 177 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECC
Confidence 4799999999999999999877889887764
No 203
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=89.23 E-value=0.3 Score=46.77 Aligned_cols=31 Identities=29% Similarity=0.309 Sum_probs=27.6
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 61 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEGHYVIASDW 61 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEECCccHHHHHHHHHHHHCCCeEEEEEC
Confidence 6899999 899999999999988888887754
No 204
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=89.18 E-value=0.25 Score=46.89 Aligned_cols=31 Identities=32% Similarity=0.431 Sum_probs=26.9
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|.+.+.
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEec
Confidence 4899999999999999999876899877753
No 205
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=89.16 E-value=0.48 Score=44.79 Aligned_cols=89 Identities=27% Similarity=0.306 Sum_probs=58.2
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
.|++|.| .|+.|+.+++.+.+.++++|+--++. .. +.. +.|. +++ .+.+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~-------------~~-----------g~~--i~G~--~vy--~sl~ 63 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPG-------------KG-----------GQN--VHGV--PVF--DTVK 63 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTT-------------CT-----------TCE--ETTE--EEE--SSHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCC-------------CC-----------Cce--ECCE--eee--CCHH
Confidence 5789999 59999999999988878766332341 00 011 2342 333 2233
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEE-eCC
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII-TAP 122 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVII-sap 122 (364)
+++- +..+|+++.++......+.+...+++|++.+|+ +..
T Consensus 64 el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G 104 (294)
T 2yv1_A 64 EAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEH 104 (294)
T ss_dssp HHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3321 116899999998888888888899999995554 543
No 206
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.08 E-value=2.4 Score=39.89 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=47.0
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
++||+|+|.|.+|..+...|.+.+.+|..+ . +.+.+..+-+. |. .++..+..+..+ +... .+++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~---~~~~~~~i~~~----g~---~~~~~~~~~~~~---~~~~--~~~~ 82 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-A---RPQHVQAIEAT----GL---RLETQSFDEQVK---VSAS--SDPS 82 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-C---CHHHHHHHHHH----CE---EEECSSCEEEEC---CEEE--SCGG
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-E---cHhHHHHHHhC----Ce---EEEcCCCcEEEe---eeee--CCHH
Confidence 479999999999999999998777787766 2 35544444321 10 112122222221 2221 2333
Q ss_pred CCCCcCCCccEEEeecCCCC
Q psy8544 82 EIPWSQTGAEYIVESTGVFK 101 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~ 101 (364)
.. .++|+||.|+...-
T Consensus 83 ~~----~~~D~vilavk~~~ 98 (318)
T 3hwr_A 83 AV----QGADLVLFCVKSTD 98 (318)
T ss_dssp GG----TTCSEEEECCCGGG
T ss_pred Hc----CCCCEEEEEccccc
Confidence 32 26899999997763
No 207
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=89.00 E-value=0.32 Score=46.34 Aligned_cols=31 Identities=35% Similarity=0.507 Sum_probs=26.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|.+.+.
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~ 175 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHAR 175 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECC
Confidence 4799999999999999999877888866543
No 208
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=88.93 E-value=0.14 Score=47.36 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=25.7
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
|++||+|+|.|.+|+.+++.|.+. ++|+.+.+. +++....+
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~--~~~~~~~~ 41 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKDR-YEIGYILSR--SIDRARNL 41 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC-----CCCEECS--SHHHHHHH
T ss_pred CCceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeC--CHHHHHHH
Confidence 678999999999999999988776 676545554 45554443
No 209
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.88 E-value=0.88 Score=45.60 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=29.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAY 43 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ 43 (364)
.||||+|.|.+|..+...|...+++|+.+ |. +++.+..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~-D~--~~~~~~~ 75 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAV-ES--DPKQLDA 75 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEE-CS--SHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEE-EC--CHHHHHH
Confidence 47999999999999999998888887766 43 4554433
No 210
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.77 E-value=0.53 Score=40.28 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=31.4
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAY 43 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ 43 (364)
.+|.|.|+|++|+.+++.|.++ +.+++++.. +++....
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~ 78 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQ 78 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHH
Confidence 4899999999999999999888 899988864 5655433
No 211
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=88.75 E-value=0.49 Score=50.33 Aligned_cols=39 Identities=23% Similarity=0.249 Sum_probs=30.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
.||||+|.|.+|..+...+...+++|+..+ . +++.+...
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D-~--~~~~~~~~ 351 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKE-V--NEKFLEAG 351 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEC-S--SHHHHHHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEE-C--CHHHHHHH
Confidence 479999999999999999988888987664 3 56555443
No 212
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=88.72 E-value=0.34 Score=46.06 Aligned_cols=31 Identities=35% Similarity=0.439 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~ 173 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDP 173 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECC
Confidence 4899999999999999999877889877754
No 213
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.70 E-value=0.42 Score=39.97 Aligned_cols=31 Identities=32% Similarity=0.397 Sum_probs=27.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|.|.|+|.+|+.+++.|.+++.+|+.+..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 5899999999999999999888888887754
No 214
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=88.66 E-value=1.9 Score=40.89 Aligned_cols=96 Identities=18% Similarity=0.258 Sum_probs=53.7
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEE 82 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~ 82 (364)
+|.|.|.|.||...++++...+. .|+++.. +.+.+..+.++ |- .-.++-+.-.+.+ ...+
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~---~~~~~~~~~~l----Ga----------~~vi~~~~~~~~~--~v~~ 229 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHLGAGRIFAVGS---RKHCCDIALEY----GA----------TDIINYKNGDIVE--QILK 229 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCSSEEEECC---CHHHHHHHHHH----TC----------CEEECGGGSCHHH--HHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEECC---CHHHHHHHHHh----CC----------ceEEcCCCcCHHH--HHHH
Confidence 68999999999999998877777 7877643 45544444322 11 0111100000000 0000
Q ss_pred CCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEE
Q psy8544 83 IPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 83 ~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVII 119 (364)
+. ...++|+||||+|.....+.+-..++.|-+-|.+
T Consensus 230 ~t-~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 230 AT-DGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HT-TTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred Hc-CCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEe
Confidence 00 1237999999999865556666677666533333
No 215
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=88.56 E-value=0.35 Score=46.52 Aligned_cols=31 Identities=19% Similarity=0.322 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|.+.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~ 177 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDI 177 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECC
Confidence 4899999999999999999877899877754
No 216
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=88.51 E-value=0.38 Score=46.07 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=27.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~ 186 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTG 186 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECC
Confidence 5899999999999999999877889877763
No 217
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.46 E-value=0.38 Score=44.39 Aligned_cols=42 Identities=21% Similarity=0.146 Sum_probs=31.2
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
|++||+|+|.|.+|..+.+.|.+.+.+|+.++. +++.+..+.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r---~~~~~~~~~ 43 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQ---WPAHIEAIR 43 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCcEEEEEC---CHHHHHHHH
Confidence 357999999999999999999887778776653 455544443
No 218
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.38 E-value=0.62 Score=46.14 Aligned_cols=40 Identities=25% Similarity=0.427 Sum_probs=33.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
.+|.|.|+|++|+.+++.|.+++.++++|.. |++.+..+-
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~---d~~~v~~~~ 44 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDH---DPDHIETLR 44 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEEC---CHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHH
Confidence 5799999999999999999988999998854 677654443
No 219
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.36 E-value=0.39 Score=46.33 Aligned_cols=30 Identities=33% Similarity=0.517 Sum_probs=26.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|||+|+|+||+.+++.|...+++|.+.+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d 194 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFS 194 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence 479999999999999999987788886654
No 220
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=88.35 E-value=0.38 Score=45.86 Aligned_cols=31 Identities=39% Similarity=0.399 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~ 173 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDI 173 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECC
Confidence 5899999999999999999877889877754
No 221
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=88.28 E-value=0.44 Score=46.38 Aligned_cols=92 Identities=17% Similarity=0.196 Sum_probs=55.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEE 82 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~ 82 (364)
.||+|.|.|.+|+.+++.|.++ .+|+ |-+. +++....+.+. + ..+.+ ...+.++
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-~~V~-V~~R--~~~~a~~la~~------~---------------~~~~~-d~~~~~~ 70 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-FDVY-IGDV--NNENLEKVKEF------A---------------TPLKV-DASNFDK 70 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-SEEE-EEES--CHHHHHHHTTT------S---------------EEEEC-CTTCHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-CeEE-EEEC--CHHHHHHHHhh------C---------------CeEEE-ecCCHHH
Confidence 6899999999999999999877 6654 4443 56654443310 0 00111 0011111
Q ss_pred CCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCC
Q psy8544 83 IPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 83 ~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsap 122 (364)
+.=--.++|+|+.|++.....+-+...+++|+ .+++.+
T Consensus 71 l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD~s 108 (365)
T 2z2v_A 71 LVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp HHHHHTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEECC
T ss_pred HHHHHhCCCEEEECCChhhhHHHHHHHHHhCC--eEEEcc
Confidence 10001268999999987666666778888888 455533
No 222
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.26 E-value=0.35 Score=45.19 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=27.5
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++||+|+|+|.+|+.+.+.|.+.+++|+..+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 46899999999999999999888888876643
No 223
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=88.24 E-value=0.37 Score=47.55 Aligned_cols=30 Identities=20% Similarity=0.251 Sum_probs=26.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|||+|+|+||+.+.+.|...+++|++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEC
Confidence 479999999999999999987789987653
No 224
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=88.23 E-value=0.37 Score=47.43 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=26.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|||+|+|+||+.+++.|...+++|++.+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEc
Confidence 489999999999999999987788886653
No 225
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=88.23 E-value=0.7 Score=43.75 Aligned_cols=88 Identities=22% Similarity=0.301 Sum_probs=58.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEE-EEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVV-GINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~iv-aInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
.||+|.| .|+.|+.+++.+.+.++++| .|| +. .. +.. +.|. +++ .+.
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~Vn-P~-------------~~-----------g~~--i~G~--~vy--~sl 62 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVVAGVT-PG-------------KG-----------GSE--VHGV--PVY--DSV 62 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TT-------------CT-----------TCE--ETTE--EEE--SSH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEEEEeC-CC-------------CC-----------Cce--ECCE--eee--CCH
Confidence 5889999 69999999998887778765 444 41 00 011 2342 333 223
Q ss_pred CCCCCcCCC-ccEEEeecCCCCCHhhHHHHHhCCCCEEEE-eCC
Q psy8544 81 EEIPWSQTG-AEYIVESTGVFKTKDTASAHLKGGAKKVII-TAP 122 (364)
Q Consensus 81 ~~~~w~~~g-vDiV~estG~f~s~e~a~~hl~aGakkVII-sap 122 (364)
++++- +.+ +|+++.++......+.+...+++|++.+|+ |..
T Consensus 63 ~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~G 105 (297)
T 2yv2_A 63 KEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEG 105 (297)
T ss_dssp HHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 33321 113 899999999888888899999999995554 543
No 226
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=88.17 E-value=0.41 Score=46.31 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=26.8
Q ss_pred ceEEEEccChHHHHHHHHHh-cCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREAL-HRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~-~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.+. ..+++|++.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECC
Confidence 47999999999999999998 77888877653
No 227
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=88.14 E-value=2.5 Score=38.93 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=27.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|-| +|.||+.+++.|.+++.+|+++..
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 5899999 899999999999988888887764
No 228
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.03 E-value=0.45 Score=42.37 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=26.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+||+|.|+|.+|+.+++.|.+.+.+|+.++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeC
Confidence 6899999999999999999887778776654
No 229
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=87.93 E-value=0.4 Score=47.53 Aligned_cols=30 Identities=30% Similarity=0.269 Sum_probs=26.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|||+|+|+||+.+.+.|...+++|++.+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d 175 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYD 175 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEc
Confidence 479999999999999999987789987664
No 230
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.73 E-value=0.41 Score=45.98 Aligned_cols=31 Identities=26% Similarity=0.407 Sum_probs=26.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~ 177 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSR 177 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECC
Confidence 4899999999999999999877888876654
No 231
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.66 E-value=0.84 Score=43.05 Aligned_cols=29 Identities=24% Similarity=0.392 Sum_probs=24.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC--cEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT--PVVGI 31 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~--~ivaI 31 (364)
+||+|.|.|.+|..++..|...+. +|+-+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~ 31 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLV 31 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 499999999999999988887765 76555
No 232
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=87.65 E-value=0.55 Score=45.11 Aligned_cols=30 Identities=30% Similarity=0.471 Sum_probs=25.7
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|.|.|.||..+++++...+..|+++..
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~ 219 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAFGSKVTVIST 219 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 689999999999999998877778877754
No 233
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.57 E-value=0.44 Score=45.69 Aligned_cols=31 Identities=32% Similarity=0.478 Sum_probs=27.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~ 181 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSR 181 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECC
Confidence 5899999999999999999877888877654
No 234
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=87.55 E-value=0.17 Score=45.91 Aligned_cols=30 Identities=27% Similarity=0.538 Sum_probs=26.4
Q ss_pred eEEEEc-cChHHHHHHHHHhcC--CCcEEEEeC
Q psy8544 4 KIGING-FGRIGRLVLREALHR--NTPVVGIND 33 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~--~~~ivaInd 33 (364)
||.|.| +|.||+.+++.|.++ +.+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence 588999 899999999999987 789888764
No 235
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=87.53 E-value=0.42 Score=47.26 Aligned_cols=31 Identities=26% Similarity=0.303 Sum_probs=27.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++|++.+.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~ 222 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDR 222 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcC
Confidence 4899999999999999999877889877654
No 236
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=87.45 E-value=1.6 Score=43.88 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=28.9
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
++||.|.| +|.||+.+++.|.+++.+|+++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999 9999999999999888898887653
No 237
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.17 E-value=0.48 Score=47.49 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=34.0
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhh
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLK 46 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ 46 (364)
|+|||+|+|.|.+|..+...|.+.+.+|+.++ . +++.+..+-+
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G~~V~~~D-~--~~~~v~~l~~ 43 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELGANVRCID-T--DRNKIEQLNS 43 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC-S--CHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcCCEEEEEE-C--CHHHHHHHHc
Confidence 77899999999999999999988888987664 3 6766655543
No 238
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=87.12 E-value=1.1 Score=39.42 Aligned_cols=31 Identities=32% Similarity=0.420 Sum_probs=26.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCC--cEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNT--PVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~--~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++. +|+++..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 4799999 89999999999988866 8877754
No 239
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=87.06 E-value=0.49 Score=46.12 Aligned_cols=31 Identities=29% Similarity=0.296 Sum_probs=26.6
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCc-EEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTP-VVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~-ivaInd 33 (364)
.+|||+|+|+||+.+++.|...+++ |++.+.
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~ 196 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDY 196 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 4899999999999999999877887 877653
No 240
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=86.87 E-value=0.67 Score=44.08 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=24.3
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC--cEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT--PVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~--~ivaInd~ 34 (364)
++||+|.|.|.||..++..|..+++ +|+-+ |.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~-Di 39 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVII-DL 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-eC
Confidence 4699999999999998888776543 55444 54
No 241
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.63 E-value=0.56 Score=43.84 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=27.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|+|+|+|+||+.+++.|...+++|.+.+.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEEC
Confidence 4799999999999999999877888877764
No 242
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=86.36 E-value=0.4 Score=44.15 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=26.2
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
++||+|+|+|.+|+.+++.|.+.+++|+..+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 3699999999999999999987777876554
No 243
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=86.15 E-value=0.64 Score=43.68 Aligned_cols=41 Identities=20% Similarity=0.350 Sum_probs=32.2
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
.+||+|+|+|.+|+.+.+.|.+.+++|+..+. +++....+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr---~~~~~~~~~ 49 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNR---SPGKAAALV 49 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECS---SHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHH
Confidence 36899999999999999999888888876643 566554444
No 244
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=86.06 E-value=0.57 Score=46.71 Aligned_cols=30 Identities=30% Similarity=0.325 Sum_probs=26.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|||+|+|+||+.+.+.+...+++|++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEC
Confidence 479999999999999999987789986654
No 245
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=86.02 E-value=0.69 Score=41.92 Aligned_cols=32 Identities=22% Similarity=0.225 Sum_probs=27.6
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+||||+|+|.+|+.+.+.|.+.+.+|+..+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47999999999999999999888888776653
No 246
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=85.97 E-value=0.66 Score=41.98 Aligned_cols=40 Identities=23% Similarity=0.364 Sum_probs=29.6
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
++||+|+|+|.+|+.+++.|.+.+.+| .+-+. +++....+
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v-~~~~~--~~~~~~~~ 42 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHEL-IISGS--SLERSKEI 42 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEE-EEECS--SHHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeE-EEECC--CHHHHHHH
Confidence 479999999999999999998766555 45554 56554443
No 247
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.96 E-value=1.2 Score=42.14 Aligned_cols=29 Identities=21% Similarity=0.283 Sum_probs=23.8
Q ss_pred ceEEEEccChHHHHHHHHHhcC--CCcEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHR--NTPVVGI 31 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~--~~~ivaI 31 (364)
|||+|.|.|.+|..++..|... ..+|+.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~ 31 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLL 31 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 4999999999999999888764 5666655
No 248
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=85.94 E-value=0.39 Score=43.57 Aligned_cols=30 Identities=27% Similarity=0.628 Sum_probs=26.8
Q ss_pred eEEEEc-cChHHHHHHHHHhcC--CCcEEEEeC
Q psy8544 4 KIGING-FGRIGRLVLREALHR--NTPVVGIND 33 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~--~~~ivaInd 33 (364)
+|.|.| +|.||+.+++.|.++ +.+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence 789999 899999999999987 889888765
No 249
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=85.92 E-value=2.2 Score=38.80 Aligned_cols=31 Identities=13% Similarity=0.185 Sum_probs=25.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|-|+|.|.+|..-++.|.+.+-.|+.|+.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 4799999999999999999888666665543
No 250
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.88 E-value=0.55 Score=44.88 Aligned_cols=32 Identities=28% Similarity=0.293 Sum_probs=25.9
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC-cEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT-PVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~-~ivaInd~ 34 (364)
++||+|.|.|.+|..+...|...++ + |.+-|.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di 36 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDI 36 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 3699999999999999888887755 7 555565
No 251
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=85.82 E-value=2.3 Score=42.38 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=29.9
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
.+|+|-|||-||+.+++.|.+.+..||+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 58999999999999999999889999999986
No 252
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.80 E-value=0.65 Score=43.48 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=27.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|+|+|+|+||+.+++.|...+++|.+.+.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGAR 188 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEEC
Confidence 4899999999999999999877888877664
No 253
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=85.78 E-value=0.68 Score=42.76 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=26.6
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
+||+|+|+|.+|+.+.+.|.+.+.+|+..+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEc
Confidence 699999999999999999988888887654
No 254
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.76 E-value=1.1 Score=40.76 Aligned_cols=39 Identities=23% Similarity=0.376 Sum_probs=30.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
|||+|+|+|.+|+.+++.|.+.+.+|+.+ +. +++.+..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~-~~--~~~~~~~~ 39 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGV-SR--QQSTCEKA 39 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS--CHHHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEE-EC--CHHHHHHH
Confidence 48999999999999999998877787766 43 56655444
No 255
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.70 E-value=0.67 Score=46.49 Aligned_cols=41 Identities=24% Similarity=0.304 Sum_probs=33.4
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+|||-|.|+|++|+.+++.|.+++.+|+.|.. |++.+-.+-
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~---d~~~~~~~~ 43 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDK---DGDRLRELQ 43 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEES---CHHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHH
Confidence 47999999999999999999877888888854 677655443
No 256
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.66 E-value=0.67 Score=43.72 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=27.2
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|++||+|.|.|.+|..+...|.+.+.+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTGHCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 788999999999999999999877778877754
No 257
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.49 E-value=0.71 Score=42.32 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=28.1
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||.|-| +|-||+.+++.|.+++.+|+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 5999999 899999999999999889988864
No 258
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=85.43 E-value=0.44 Score=43.27 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=28.2
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|+|||.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECT
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecc
Confidence 667999999 899999999999888888888753
No 259
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=85.38 E-value=0.68 Score=43.77 Aligned_cols=39 Identities=21% Similarity=0.152 Sum_probs=31.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
+||+|+|+|.+|+.+.+.|.+.+++|+..+. +++....+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr---~~~~~~~l 70 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNR---TPARAASL 70 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECS---CHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcC---CHHHHHHH
Confidence 6999999999999999999888888776643 56654444
No 260
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.33 E-value=0.67 Score=42.78 Aligned_cols=39 Identities=26% Similarity=0.368 Sum_probs=30.0
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHH
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAY 43 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ 43 (364)
++||+|+|+|.+|+.+++.|.+.+++|+.. +. +++....
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~-~~--~~~~~~~ 42 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAF-DL--MEANVAA 42 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEE-CS--SHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEE-eC--CHHHHHH
Confidence 479999999999999999998777887655 33 4554433
No 261
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=85.29 E-value=0.59 Score=44.00 Aligned_cols=32 Identities=28% Similarity=0.365 Sum_probs=27.8
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
|+-|||++|+|.+|..+.+.|.+.+++|+.-|
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWN 35 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEe
Confidence 76799999999999999999998889986554
No 262
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=85.25 E-value=1.2 Score=42.40 Aligned_cols=30 Identities=30% Similarity=0.270 Sum_probs=24.1
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC--cEEEE
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT--PVVGI 31 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~--~ivaI 31 (364)
++||+|.|.|.||..++-.|..+++ +|+-+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~ 38 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLI 38 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 4799999999999998888877654 66544
No 263
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.80 E-value=0.9 Score=39.60 Aligned_cols=31 Identities=13% Similarity=0.192 Sum_probs=27.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||+|.| .|.+|+.+++.|.+++.+|+.++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4899999 999999999999888888877754
No 264
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=84.70 E-value=0.81 Score=42.98 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+||+|+|+|.+|+.+.+.|.+.+++|+..+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeC
Confidence 6999999999999999999988888776643
No 265
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=84.58 E-value=0.75 Score=42.70 Aligned_cols=40 Identities=13% Similarity=0.163 Sum_probs=31.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+||+|+|+|.+|+.+.+.|.+.+++|+..+ . +++.+..+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d-~--~~~~~~~~~ 43 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFD-L--VQSAVDGLV 43 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEEC-S--SHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEc-C--CHHHHHHHH
Confidence 699999999999999999988888887664 3 566554443
No 266
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=84.56 E-value=0.84 Score=43.99 Aligned_cols=30 Identities=27% Similarity=0.511 Sum_probs=25.3
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|+|.|.||...++++...+..|+++..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~ 226 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMGAHVVAFTT 226 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 689999999999999988777778777653
No 267
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=84.44 E-value=0.7 Score=43.42 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=26.2
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|++||+|.|.|.+|..+...|.+.+.+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSGEDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTSCCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEEc
Confidence 778999999999999999999877778776654
No 268
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=84.35 E-value=0.84 Score=43.18 Aligned_cols=41 Identities=12% Similarity=0.160 Sum_probs=31.1
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
|++||+|+|.|.+|..+.+.|.+.+.+|..++. +++....+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r---~~~~~~~l 53 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWAR---RKEIVDLI 53 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS---SHHHHHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeC---CHHHHHHH
Confidence 678999999999999999999877778766654 35544333
No 269
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=84.27 E-value=1.4 Score=43.90 Aligned_cols=90 Identities=7% Similarity=0.015 Sum_probs=49.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEE 82 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~ 82 (364)
.+|.|.|.|.||+.+++.|.+.+.+|+..+. +++....+.+ .+. + +. .+.+ ...+++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R---~~~~a~~la~------~~~-------~-~~----~~~~-Dv~d~~~ 61 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACR---TLESAKKLSA------GVQ-------H-ST----PISL-DVNDDAA 61 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEES---SHHHHHHTTT------TCT-------T-EE----EEEC-CTTCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEEC---CHHHHHHHHH------hcC-------C-ce----EEEe-ecCCHHH
Confidence 4799999999999999999877778665543 3443322221 000 0 00 0000 0011111
Q ss_pred CCCcCCCccEEEeecCCCCCHhhHHHHHhCCC
Q psy8544 83 IPWSQTGAEYIVESTGVFKTKDTASAHLKGGA 114 (364)
Q Consensus 83 ~~w~~~gvDiV~estG~f~s~e~a~~hl~aGa 114 (364)
+.=.-.++|+|+.|+|.+...+.+...+++|.
T Consensus 62 l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~ 93 (450)
T 1ff9_A 62 LDAEVAKHDLVISLIPYTFHATVIKSAIRQKK 93 (450)
T ss_dssp HHHHHTTSSEEEECCC--CHHHHHHHHHHHTC
T ss_pred HHHHHcCCcEEEECCccccchHHHHHHHhCCC
Confidence 10000268999999998765555555666665
No 270
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=84.13 E-value=0.57 Score=43.62 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=25.2
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|++||+|+|.|.+|..+...|.+.+.+|..+..
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r 33 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSLPHTTLIGR 33 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHCTTCEEEES
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEe
Confidence 778999999999999999888766556655543
No 271
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.07 E-value=0.69 Score=44.32 Aligned_cols=30 Identities=33% Similarity=0.345 Sum_probs=24.8
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC-cEEEE
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT-PVVGI 31 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~-~ivaI 31 (364)
.+||+|.|.|.||..++..|..+++ +|+-+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~ 35 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLF 35 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEE
Confidence 3699999999999999988887765 76554
No 272
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=84.02 E-value=3 Score=40.39 Aligned_cols=39 Identities=21% Similarity=0.069 Sum_probs=29.3
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.|.|.||...++++...+. .|+++.. +.+.+.++.
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~ 255 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHAGASKVILSEP---SEVRRNLAK 255 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECS---CHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHH
Confidence 68999999999999998887777 7777643 455554443
No 273
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.01 E-value=0.94 Score=40.11 Aligned_cols=29 Identities=21% Similarity=0.174 Sum_probs=25.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGI 31 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaI 31 (364)
+||+|+|+|.+|+.+.+.|.+.+.+|+.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~ 48 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYY 48 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 68999999999999999998877787655
No 274
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=83.98 E-value=0.98 Score=42.21 Aligned_cols=31 Identities=29% Similarity=0.445 Sum_probs=26.2
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEe
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
..||+|+| +|.||..+.+.|.+.+.+|..++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~ 52 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILD 52 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 35899999 99999999999987777876554
No 275
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=83.79 E-value=1.6 Score=42.11 Aligned_cols=40 Identities=30% Similarity=0.335 Sum_probs=32.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
.||+|+|+|.||..+.+.|.+.+.+|++.+. +++.+..+.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr---~~~~~~~a~ 48 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNR---SRSGAKSAV 48 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECS---CHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHH
Confidence 5899999999999999999888888876653 566555544
No 276
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=83.68 E-value=3.9 Score=38.62 Aligned_cols=91 Identities=20% Similarity=0.128 Sum_probs=56.6
Q ss_pred ceEEEEccChHHHH-HHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRL-VLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~-vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
.||.|+|.|.+|.. +++.|.+++.+|.+ .|....+.....|-+ . | +.+....+++
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~-~D~~~~~~~~~~L~~--------------~-------g--i~v~~g~~~~ 60 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSG-CDAKMYPPMSTQLEA--------------L-------G--IDVYEGFDAA 60 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEE-EESSCCTTHHHHHHH--------------T-------T--CEEEESCCGG
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEE-EcCCCCcHHHHHHHh--------------C-------C--CEEECCCCHH
Confidence 58999999999995 88888888888654 453212222222211 1 1 1122223455
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeC
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITA 121 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsa 121 (364)
++.+ .++|+|+=|.|.-.+.+....+.++|. -|++-
T Consensus 61 ~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi--~v~~~ 96 (326)
T 3eag_A 61 QLDE--FKADVYVIGNVAKRGMDVVEAILNLGL--PYISG 96 (326)
T ss_dssp GGGS--CCCSEEEECTTCCTTCHHHHHHHHTTC--CEEEH
T ss_pred HcCC--CCCCEEEECCCcCCCCHHHHHHHHcCC--cEEeH
Confidence 4431 258999999998877766777777887 45653
No 277
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=83.38 E-value=3.3 Score=39.04 Aligned_cols=87 Identities=20% Similarity=0.221 Sum_probs=51.3
Q ss_pred eEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC-C
Q psy8544 4 KIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP-E 81 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p-~ 81 (364)
+|.|+|.|.||...++++... ...|+++.. +.+.+..+.++.- + -.++. ..+. +
T Consensus 174 ~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~lGa-------~-------~~i~~-------~~~~~~ 229 (345)
T 3jv7_A 174 TAVVIGVGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREVGA-------D-------AAVKS-------GAGAAD 229 (345)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHTTC-------S-------EEEEC-------STTHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCC-------C-------EEEcC-------CCcHHH
Confidence 689999999999999988766 678887753 4555544443210 0 01110 0000 0
Q ss_pred CC-CC-cCCCccEEEeecCCCCCHhhHHHHHhCCC
Q psy8544 82 EI-PW-SQTGAEYIVESTGVFKTKDTASAHLKGGA 114 (364)
Q Consensus 82 ~~-~w-~~~gvDiV~estG~f~s~e~a~~hl~aGa 114 (364)
.+ .+ +..++|+||||+|.....+.+-..++.|-
T Consensus 230 ~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G 264 (345)
T 3jv7_A 230 AIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDG 264 (345)
T ss_dssp HHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEE
T ss_pred HHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCC
Confidence 00 00 12389999999997645555556666554
No 278
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=83.38 E-value=1 Score=45.43 Aligned_cols=93 Identities=10% Similarity=0.097 Sum_probs=54.7
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
.||.|.|.|.+|+.+++.|.++ +++|+.++. +++....+.+. .+ + +.+.+ ...+++
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R---~~~ka~~la~~---~~-----~-----------~~~~~-D~~d~~ 80 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAANDDINVTVACR---TLANAQALAKP---SG-----S-----------KAISL-DVTDDS 80 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSTTEEEEEEES---SHHHHHHHHGG---GT-----C-----------EEEEC-CTTCHH
T ss_pred CEEEEECChHHHHHHHHHHHhCCCCeEEEEEC---CHHHHHHHHHh---cC-----C-----------cEEEE-ecCCHH
Confidence 4799999999999999999987 788766654 34443333311 00 0 00111 001111
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEe
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIs 120 (364)
.+.-.-.++|+||.|+|.+...+.+...+++|+ .+++
T Consensus 81 ~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~--~vvd 117 (467)
T 2axq_A 81 ALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT--DVVT 117 (467)
T ss_dssp HHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC--EEEE
T ss_pred HHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC--EEEE
Confidence 110000268999999998765555566777776 4444
No 279
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=83.31 E-value=1.8 Score=40.88 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=27.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC-CC-cEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHR-NT-PVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~-~~-~ivaInd 33 (364)
.+|-|-| +|.||+.+++.|.++ +. +|+++..
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 5899999 899999999999888 76 8877764
No 280
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.25 E-value=0.88 Score=41.86 Aligned_cols=30 Identities=17% Similarity=0.495 Sum_probs=25.9
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
|||+|+|+|.+|+.+.+.|.+.+++|+..+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~ 30 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYD 30 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEe
Confidence 489999999999999999987778876654
No 281
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=83.23 E-value=3 Score=39.80 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=30.0
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.|.|.||...++++...+.+|+++.. +.+.+..+.
T Consensus 192 ~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~ 230 (363)
T 3uog_A 192 RVVVQGTGGVALFGLQIAKATGAEVIVTSS---SREKLDRAF 230 (363)
T ss_dssp EEEEESSBHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEec---CchhHHHHH
Confidence 689999999999999988877888887753 355544443
No 282
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=83.16 E-value=1.1 Score=37.73 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=28.1
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|+..|+|+|-|..|-..+..|..++++++-+-.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 889999999999999999999888888876643
No 283
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=83.14 E-value=1.9 Score=41.37 Aligned_cols=38 Identities=21% Similarity=0.151 Sum_probs=28.1
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd~~~~~~~~a~l 44 (364)
+|.|+|.|.||...++++...+. .|+++. . +.+.+..+
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~-~--~~~~~~~a 223 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLAGATTVILST-R--QATKRRLA 223 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEC-S--CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEC-C--CHHHHHHH
Confidence 68999999999999998887777 666653 2 45544433
No 284
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=82.97 E-value=0.97 Score=46.15 Aligned_cols=31 Identities=32% Similarity=0.524 Sum_probs=27.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|||+|+|+||+.+.+.|...+++|++.+.
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~ 173 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDP 173 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECC
Confidence 5899999999999999999877889877753
No 285
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=82.97 E-value=1.1 Score=41.05 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=29.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC--cEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT--PVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~--~ivaInd~~~~~~~~a~l 44 (364)
+||+|+|+|.+|+.+++.|.+.+. +|+.. |. +++.+..+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~-d~--~~~~~~~~ 42 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGY-DI--NPESISKA 42 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEE-CS--CHHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEE-eC--CHHHHHHH
Confidence 589999999999999999987765 77655 43 45554443
No 286
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=82.81 E-value=1.1 Score=42.31 Aligned_cols=40 Identities=10% Similarity=0.127 Sum_probs=30.6
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
++||+|+|.|.+|..+.+.|.+.+.+|+.++. +++.+..+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r---~~~~~~~~ 43 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDI---DAQRIKEI 43 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeC---CHHHHHHH
Confidence 36999999999999999999877788766643 45544333
No 287
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=82.78 E-value=0.94 Score=41.36 Aligned_cols=29 Identities=21% Similarity=0.301 Sum_probs=25.6
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
+||+|+|+|.+|+.+.+.|.. +.+|+..+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEe
Confidence 599999999999999999988 88876654
No 288
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=82.76 E-value=0.94 Score=40.99 Aligned_cols=29 Identities=24% Similarity=0.469 Sum_probs=25.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGI 31 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaI 31 (364)
|||+|+|+|.+|+.+.+.|.+.+++|+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEe
Confidence 48999999999999999998877887653
No 289
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=82.66 E-value=1.2 Score=40.74 Aligned_cols=32 Identities=28% Similarity=0.357 Sum_probs=28.5
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++||.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 39 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDD 39 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEec
Confidence 46899999 899999999999988889888865
No 290
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=82.54 E-value=3.9 Score=38.66 Aligned_cols=22 Identities=32% Similarity=0.492 Sum_probs=18.9
Q ss_pred ceEEEEccChHHHHHHHHHhcC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR 24 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~ 24 (364)
|||+|.|.|.||..+.-.|..+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~ 22 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN 22 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC
Confidence 5999999999999988777655
No 291
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=82.53 E-value=0.83 Score=37.59 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=28.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYL 41 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~ 41 (364)
.||+|.|+|.+|+.+++.|.+++++ |.+-+. +++..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r--~~~~~ 57 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYK-VTVAGR--NIDHV 57 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCE-EEEEES--CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE-EEEEcC--CHHHH
Confidence 5899999999999999988777888 555554 45543
No 292
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=82.53 E-value=0.45 Score=43.75 Aligned_cols=32 Identities=13% Similarity=0.025 Sum_probs=28.1
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+||+|+|.|.||..+.+.|.+.+.+|++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 47999999999999999999888889877654
No 293
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=82.37 E-value=0.59 Score=49.61 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=30.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAY 43 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ 43 (364)
.||||+|.|.+|..+...+...+++|+..+ . +++.+..
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D-~--~~~~~~~ 352 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKD-I--NEHGIEQ 352 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEEC-S--SHHHHHH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEE-C--CHHHHHH
Confidence 479999999999999999988888877654 3 5555443
No 294
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=82.36 E-value=0.88 Score=41.09 Aligned_cols=30 Identities=20% Similarity=0.377 Sum_probs=24.3
Q ss_pred CceEEEEccChHHHHHHHHHhcCC----CcEEEE
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRN----TPVVGI 31 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~----~~ivaI 31 (364)
.+||+|+|.|.+|+.+.+.|.+.+ .+|...
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~ 37 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYY 37 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEE
Confidence 379999999999999999987665 466444
No 295
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=82.15 E-value=3.7 Score=41.52 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=27.6
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CC-cEEEEe
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NT-PVVGIN 32 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~-~ivaIn 32 (364)
.+||+|.|.|.+|..+...|.+. ++ +|+.++
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 36999999999999999999988 88 988775
No 296
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=81.98 E-value=1.2 Score=43.29 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=32.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+||||+|+|.+|+.+.+.|.+.+++|+..+. +++....+.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr---~~~~~~~l~ 62 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDL---NVNAVQALE 62 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeC---CHHHHHHHH
Confidence 7999999999999999999988888876653 566554544
No 297
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=81.93 E-value=1.3 Score=40.69 Aligned_cols=32 Identities=31% Similarity=0.448 Sum_probs=27.8
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEe
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
|.++|.|.| +|.||+.+++.|.+++.+|+++.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCG 33 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEc
Confidence 667999999 89999999999998888888775
No 298
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=81.92 E-value=1.2 Score=41.50 Aligned_cols=30 Identities=30% Similarity=0.410 Sum_probs=26.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
+||+|+|+|.+|+.+++.|.+.+++|+..+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~ 60 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWN 60 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEe
Confidence 689999999999999999987777876554
No 299
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=81.90 E-value=2.1 Score=40.50 Aligned_cols=38 Identities=24% Similarity=0.187 Sum_probs=29.3
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd~~~~~~~~a~l 44 (364)
+|.|.|.|.||..+++++...+. +|+++.. +.+.+..+
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~ 208 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASGAYPVIVSEP---SDFRRELA 208 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHH
Confidence 68999999999999999887777 8877743 35544443
No 300
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=82.66 E-value=0.28 Score=43.59 Aligned_cols=30 Identities=23% Similarity=0.110 Sum_probs=24.7
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEE
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGI 31 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaI 31 (364)
.+||+|+|+|.+|+.+.+.|.+.+.+|..+
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~ 48 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFG 48 (201)
Confidence 468999999999999999887766666544
No 301
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=81.81 E-value=1.2 Score=40.38 Aligned_cols=31 Identities=29% Similarity=0.392 Sum_probs=26.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||+|+|.|.+|..+.+.|.+.+.+|..++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEc
Confidence 4899999999999999999887778876654
No 302
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=81.75 E-value=0.89 Score=43.45 Aligned_cols=42 Identities=12% Similarity=0.046 Sum_probs=31.0
Q ss_pred CCc-eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 1 MAY-KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 1 m~i-rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
|+| ||+|+|.|.+|..+...|.+.+.+|..++. +++.+..+.
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r---~~~~~~~l~ 55 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKKCREVCVWHM---NEEEVRLVN 55 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTTEEEEEEECS---CHHHHHHHH
T ss_pred hccCeEEEECCCHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHH
Confidence 445 999999999999999999877677766643 455544443
No 303
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=81.70 E-value=1.3 Score=41.90 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=24.5
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC--cEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT--PVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~--~ivaInd~ 34 (364)
++||+|.|.|.||..++..|..+++ +|+.+ |.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~-Di 39 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLI-DA 39 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEE-CS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEE-eC
Confidence 3699999999999999888866543 56554 54
No 304
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.64 E-value=0.9 Score=41.92 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=26.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+||+|+|+|.+|+.+.+.|.+.+.+|+..+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcC
Confidence 5999999999999999999877888776643
No 305
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=81.17 E-value=1.2 Score=45.27 Aligned_cols=30 Identities=13% Similarity=0.145 Sum_probs=26.3
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|+|.|+|+||+.+++.|...+++|++.+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d 307 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTE 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEe
Confidence 489999999999999999987788877664
No 306
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=81.12 E-value=2.4 Score=40.30 Aligned_cols=30 Identities=27% Similarity=0.333 Sum_probs=25.3
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|.|.|.||...++++...+..|+++..
T Consensus 182 ~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~ 211 (360)
T 1piw_A 182 KVGIVGLGGIGSMGTLISKAMGAETYVISR 211 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 699999999999999988766778877764
No 307
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=80.83 E-value=1.5 Score=41.70 Aligned_cols=38 Identities=21% Similarity=0.171 Sum_probs=28.3
Q ss_pred eEEEEccChHHHHHHHHHhcCCCc-EEEEeCCCCCHHHHHHH
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTP-VVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~-ivaInd~~~~~~~~a~l 44 (364)
+|.|+|.|.||...++++...+.. |+++.. +.+.+..+
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a 220 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAAGACPLVITDI---DEGRLKFA 220 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCSEEEEES---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHH
Confidence 689999999999999988877776 666642 35544443
No 308
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=80.76 E-value=1.5 Score=40.50 Aligned_cols=40 Identities=18% Similarity=0.200 Sum_probs=31.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
.||+|+|.|.+|+.+++.+...+++|+.. |. +++.+..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~-d~--~~~~~~~~~ 44 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAY-DI--NTDALDAAK 44 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS--SHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEE-eC--CHHHHHHHH
Confidence 48999999999999999998888887665 43 565554443
No 309
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=80.76 E-value=2.1 Score=41.79 Aligned_cols=37 Identities=11% Similarity=0.355 Sum_probs=30.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLA 42 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a 42 (364)
.+|+|.|+|.||+.+++.|.+.+..|+ +.|+ +++.+.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVv-v~D~--~~~~l~ 210 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLV-VTDV--NKAAVS 210 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS--CHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEE-EEcC--CHHHHH
Confidence 479999999999999999998888887 7776 665443
No 310
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=80.31 E-value=1.2 Score=40.19 Aligned_cols=39 Identities=8% Similarity=0.052 Sum_probs=29.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~-~~ivaInd~~~~~~~~a~l 44 (364)
|||+|+|.|.+|+.+.+.|.+.+ .+|... +. +++....+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~-~r--~~~~~~~~ 40 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIA-NR--GAEKRERL 40 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEE-CS--SHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEE-CC--CHHHHHHH
Confidence 48999999999999999987766 676554 43 45554443
No 311
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=80.26 E-value=0.84 Score=43.60 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=25.0
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|.|.|.||...++++...+..|+++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~ 212 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMGHHVTVISS 212 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 689999999999999988766778777754
No 312
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=80.22 E-value=1.5 Score=41.95 Aligned_cols=31 Identities=19% Similarity=0.137 Sum_probs=26.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+||+|+|+|.||+.+++.|.+.+++|+..+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEEC
Confidence 5899999999999999999887788765543
No 313
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=80.17 E-value=1 Score=41.59 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=26.8
Q ss_pred CceEEEEccChHHHHHHHHHhcC-----C-CcEEEEeC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-----N-TPVVGIND 33 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-----~-~~ivaInd 33 (364)
+|||+|.|.|.+|..+.+.|.+. + .+|+.++.
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 47999999999999999988876 6 78776653
No 314
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=80.11 E-value=0.95 Score=43.25 Aligned_cols=29 Identities=24% Similarity=0.381 Sum_probs=23.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC--cEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT--PVVGI 31 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~--~ivaI 31 (364)
|||+|.|.|.||..++..+..+++ +|+-+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~ 31 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMV 31 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 499999999999999988876654 65544
No 315
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=79.99 E-value=1.4 Score=44.58 Aligned_cols=42 Identities=19% Similarity=0.317 Sum_probs=33.4
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
|..+|||+|.|.+|+.+.+.|.+++++|+..|. +++.+..+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr---~~~~~~~l~ 50 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNR---TQSKVDHFL 50 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECS---SSHHHHHHH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHH
Confidence 678999999999999999999988889877664 355544444
No 316
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=79.92 E-value=1.5 Score=44.03 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=31.7
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
++||||+|+|.+|+.+++.|.+.+++|...+. +++....+.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr---~~~~~~~l~ 45 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNR---TTSKTEEVF 45 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECS---SHHHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcC---CHHHHHHHH
Confidence 36999999999999999999888888766653 455544443
No 317
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=79.85 E-value=1.7 Score=40.32 Aligned_cols=33 Identities=33% Similarity=0.363 Sum_probs=29.2
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|.++|-|.| +|.||+.+++.|.+++.+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 778999999 899999999999988888888753
No 318
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=79.59 E-value=1.4 Score=37.91 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=27.1
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCC--cEEEEeC
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNT--PVVGIND 33 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~--~ivaInd 33 (364)
|.++|.|.| +|.||+.+++.|.+++. +|+++..
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r 39 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR 39 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 346899999 99999999999998854 8876643
No 319
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=79.55 E-value=1.6 Score=41.81 Aligned_cols=90 Identities=13% Similarity=0.221 Sum_probs=52.3
Q ss_pred eEEEEc-cChHHHHHHHHHhc-CCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 4 KIGING-FGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~-~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
+|.|+| .|.||...++++.. ...+|+++.. +.+.+.++.++ | .+ ..++.+. .+. ....
T Consensus 174 ~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~l----G---ad-------~vi~~~~-~~~--~~v~ 233 (363)
T 4dvj_A 174 AILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSL----G---AH-------HVIDHSK-PLA--AEVA 233 (363)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHT----T---CS-------EEECTTS-CHH--HHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHc----C---CC-------EEEeCCC-CHH--HHHH
Confidence 589999 99999999998876 4778887753 45555444432 1 11 1111100 000 0011
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCC
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAK 115 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGak 115 (364)
++ ...++|+||||+|.....+.+-.+++.|-+
T Consensus 234 ~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~ 265 (363)
T 4dvj_A 234 AL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGR 265 (363)
T ss_dssp TT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCE
T ss_pred Hh--cCCCceEEEECCCchhhHHHHHHHhcCCCE
Confidence 11 224899999999965444555566666653
No 320
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=79.04 E-value=1.8 Score=40.11 Aligned_cols=41 Identities=17% Similarity=0.244 Sum_probs=30.7
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC---cEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT---PVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~---~ivaInd~~~~~~~~a~ll 45 (364)
.+||+|+|.|.+|+.+++.|.+.++ +|+.. |. +++.+..+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~-dr--~~~~~~~l~ 46 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVT-NR--SLDKLDFFK 46 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEE-CS--SSHHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEE-eC--CHHHHHHHH
Confidence 4799999999999999999988766 66555 43 455544443
No 321
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=79.03 E-value=6.8 Score=36.97 Aligned_cols=38 Identities=24% Similarity=0.150 Sum_probs=28.3
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
+|.|.|.|.||...++++...+..|+++.. +.+.+..+
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~ 208 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYGAFVVCTAR---SPRRLEVA 208 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEcC---CHHHHHHH
Confidence 689999999999999988777777766643 35544333
No 322
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=79.02 E-value=1.6 Score=44.14 Aligned_cols=29 Identities=14% Similarity=0.145 Sum_probs=25.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGI 31 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaI 31 (364)
-+|+|.|+|+||+.+++.|...++.|++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEE
Confidence 37999999999999999998878887655
No 323
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=78.91 E-value=1.6 Score=43.81 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=26.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
.+|+|+|+|+||+.+++.|...++.|++. |+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~-D~ 242 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVT-EV 242 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEE-CC
Confidence 48999999999999999998878886654 44
No 324
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=78.91 E-value=4.7 Score=38.23 Aligned_cols=38 Identities=29% Similarity=0.232 Sum_probs=28.6
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd~~~~~~~~a~l 44 (364)
+|.|+|.|.||...++++...+. .|+++.. +.+.+..+
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a 212 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMGAAQVVVTDL---SATRLSKA 212 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHH
Confidence 69999999999999998877777 7777753 34444333
No 325
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=78.90 E-value=3 Score=39.08 Aligned_cols=39 Identities=8% Similarity=0.106 Sum_probs=30.2
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.| .|.||...++++...+.+|+++.. +.+.+..+.
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~ 190 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAK 190 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHH
Confidence 689999 899999999998877888887754 455554443
No 326
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=78.88 E-value=1.2 Score=45.06 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=26.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|+|+|+|+||+.+++.|...+++|++.+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d 287 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITE 287 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEe
Confidence 489999999999999999877688887664
No 327
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=78.83 E-value=1.3 Score=41.59 Aligned_cols=30 Identities=17% Similarity=0.352 Sum_probs=25.6
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC-cEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT-PVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~-~ivaIn 32 (364)
+||||+|+|.+|+.+.+.|.+.++ +|+..+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~d 55 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYD 55 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEc
Confidence 699999999999999999987777 665554
No 328
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=78.75 E-value=1.3 Score=42.03 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=22.7
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeCC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDP 34 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd~ 34 (364)
||+|.|.|.+|..++..+...++ +|+-+ |.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~-Di 31 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLI-AR 31 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEE-CS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEE-cC
Confidence 79999999999988877765565 45443 54
No 329
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=78.73 E-value=13 Score=34.57 Aligned_cols=31 Identities=19% Similarity=0.133 Sum_probs=26.8
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
|+.|.|.|.+||.+++.|.+.+.+|..+|..
T Consensus 120 ~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 120 NALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 7999999999999999998877777767764
No 330
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=78.64 E-value=1.8 Score=40.97 Aligned_cols=31 Identities=16% Similarity=0.168 Sum_probs=26.6
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+||+|+|.|.+|..+...|.+.+.+|..+.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~ 33 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLA 33 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 3799999999999999999988777876664
No 331
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=78.58 E-value=1.7 Score=41.06 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=25.7
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGIND 33 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd 33 (364)
+|.|.|.|.||..+++++...+. +|+++..
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~ 197 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRASGAGPILVSDP 197 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 68999999999999998887788 8887753
No 332
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=78.43 E-value=2.1 Score=39.89 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=25.5
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
+|.|+|.|.||...++++...+.+|+++.
T Consensus 145 ~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~ 173 (315)
T 3goh_A 145 EVLIVGFGAVNNLLTQMLNNAGYVVDLVS 173 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEE
Confidence 68999999999999998876677888886
No 333
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=78.20 E-value=3.1 Score=41.10 Aligned_cols=39 Identities=18% Similarity=0.126 Sum_probs=30.2
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.| .|.||...++++...+..++++.. +.+.+.++.
T Consensus 231 ~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~ 270 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICR 270 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHH
Confidence 699999 599999999988877888887754 455555554
No 334
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=78.15 E-value=2.5 Score=40.13 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=25.7
Q ss_pred ceEEEEccChHHHHH-HHHH-hcCCCc-EEEEeC
Q psy8544 3 YKIGINGFGRIGRLV-LREA-LHRNTP-VVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~v-lr~l-~~~~~~-ivaInd 33 (364)
-+|.|+|.|.||... ++++ ...+.. |+++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeC
Confidence 479999999999999 8888 666777 887764
No 335
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=78.07 E-value=2.5 Score=40.60 Aligned_cols=39 Identities=23% Similarity=0.196 Sum_probs=29.9
Q ss_pred eEEEEccChHHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGINGFGRIGRLVLREALHRN-TPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~-~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.|.|.||...++++...+ .+|+++.. +.+.+..+.
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~ 237 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAE 237 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHH
Confidence 6999999999999999887777 58887753 355554443
No 336
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=77.98 E-value=1.5 Score=42.47 Aligned_cols=32 Identities=22% Similarity=0.168 Sum_probs=26.5
Q ss_pred CCceEEEEccChHHHHHHHHHhcC-CCcEEEEe
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHR-NTPVVGIN 32 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~-~~~ivaIn 32 (364)
|+|||+|+|.|.+|..+...|..+ +.+|+.+.
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 668999999999999999999774 77876664
No 337
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=77.88 E-value=1.8 Score=43.56 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=31.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
|||||+|+|.+|+.+.+.|.+++++|...+. +++....+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr---~~~~~~~l~ 41 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNR---TYSKSEEFM 41 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECS---SHHHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHH
Confidence 5899999999999999999888888766653 455554443
No 338
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=77.57 E-value=1.4 Score=40.20 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=28.8
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcC--CCcEEEEeC
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHR--NTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~--~~~ivaInd 33 (364)
|.++|.|.| +|.||+.+++.|.++ +.+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 778999999 899999999999887 788887754
No 339
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=77.45 E-value=4.9 Score=37.43 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=25.8
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
+|.|.| .|.||...++++...+..++++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~ 183 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGK 183 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 699999 5999999999887777788877653
No 340
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=77.45 E-value=2.1 Score=41.06 Aligned_cols=30 Identities=30% Similarity=0.248 Sum_probs=24.8
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC-cEEEE
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT-PVVGI 31 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~-~ivaI 31 (364)
.+||+|.|.|.+|..++..|..+++ +|+-+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~ 37 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLF 37 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEE
Confidence 3599999999999999988887766 76544
No 341
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=77.06 E-value=4.2 Score=38.90 Aligned_cols=29 Identities=28% Similarity=0.540 Sum_probs=24.6
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEe
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGIN 32 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaIn 32 (364)
+|.|.|.|.||...++++...+. .|+++.
T Consensus 196 ~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~ 225 (378)
T 3uko_A 196 NVAIFGLGTVGLAVAEGAKTAGASRIIGID 225 (378)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 68999999999999998876677 787774
No 342
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=77.02 E-value=5.7 Score=37.14 Aligned_cols=92 Identities=21% Similarity=0.177 Sum_probs=49.7
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCCC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEEI 83 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~~ 83 (364)
+|.|.|.|.+|...++++...+...+.+-+. +.+.+..+.++.-. ..+...+.... .. ...+
T Consensus 163 ~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~--~~~k~~~a~~lGa~-----~~i~~~~~~~~------~~-----~~~~ 224 (346)
T 4a2c_A 163 NVIIIGAGTIGLLAIQCAVALGAKSVTAIDI--SSEKLALAKSFGAM-----QTFNSSEMSAP------QM-----QSVL 224 (346)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHTTCS-----EEEETTTSCHH------HH-----HHHH
T ss_pred EEEEECCCCcchHHHHHHHHcCCcEEEEEec--hHHHHHHHHHcCCe-----EEEeCCCCCHH------HH-----HHhh
Confidence 6899999999999998887776665444443 45555444432210 00110000000 00 0000
Q ss_pred CCcCCCccEEEeecCCCCCHhhHHHHHhCCC
Q psy8544 84 PWSQTGAEYIVESTGVFKTKDTASAHLKGGA 114 (364)
Q Consensus 84 ~w~~~gvDiV~estG~f~s~e~a~~hl~aGa 114 (364)
. +..++|+|+||+|...+.+.+-..++.|-
T Consensus 225 ~-~~~g~d~v~d~~G~~~~~~~~~~~l~~~G 254 (346)
T 4a2c_A 225 R-ELRFNQLILETAGVPQTVELAVEIAGPHA 254 (346)
T ss_dssp G-GGCSSEEEEECSCSHHHHHHHHHHCCTTC
T ss_pred c-ccCCcccccccccccchhhhhhheecCCe
Confidence 0 11378999999997655555555555554
No 343
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=77.01 E-value=1.7 Score=43.09 Aligned_cols=115 Identities=12% Similarity=0.170 Sum_probs=61.9
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHhh-cccccccCCcceeec--CCeEEECCEEEEEEe
Q psy8544 3 YKIGING-FGRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYMLK-YDSTHGRFKGDVKTE--GNNIVVNGKKIAVFQ 76 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~ll~-ydS~~g~~~~~v~~~--~~~l~i~gk~I~v~~ 76 (364)
-+|.|.| ||-||.+.++++..+ .|+|+++.. ..+.+.++...+ |...+--.......+ ...+.-.+..++++.
T Consensus 10 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~a-g~nv~~L~~q~~~f~p~~v~v~d~~~~~~L~~~l~~~~~~~~v~~ 88 (406)
T 1q0q_A 10 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-GKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS 88 (406)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred eeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEc-CCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhcCCCCcEEEe
Confidence 3899999 999999999999877 699999976 357776665442 221110000000000 000000111122322
Q ss_pred cC-CCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEe
Q psy8544 77 KM-KPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120 (364)
Q Consensus 77 ~~-~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIs 120 (364)
.. ...++- ....+|+|+-+.-.+....-.-+++++|. ++-+.
T Consensus 89 G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK-~iaLA 131 (406)
T 1q0q_A 89 GQQAACDMA-ALEDVDQVMAAIVGAAGLLPTLAAIRAGK-TILLA 131 (406)
T ss_dssp SHHHHHHHH-TCTTCCEEEECCSSGGGHHHHHHHHHTTC-EEEEC
T ss_pred CHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCCC-eEEEe
Confidence 11 111110 01258999999866666665566788884 55553
No 344
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=76.86 E-value=3.3 Score=41.66 Aligned_cols=41 Identities=22% Similarity=0.252 Sum_probs=32.6
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+.||||+|+|.+|+.+.+.|.+.+++|+..|. +++....+.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r---~~~~~~~l~ 55 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNR---SREKTEEVI 55 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECS---SHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeC---CHHHHHHHH
Confidence 46899999999999999999888889877664 466554444
No 345
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=76.77 E-value=1.8 Score=40.69 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=30.2
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.|.|.||...++++...+.+|+++.. +.+.+.++.
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~ 207 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAMGLRVAAVDI---DDAKLNLAR 207 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEEES---CHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHH
Confidence 689999999999999998877788888753 455554443
No 346
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=76.51 E-value=1.8 Score=40.38 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=26.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||+|+|.|.+|..+.+.|.+.+.+|..++.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 4899999999999999998876778776653
No 347
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=76.25 E-value=4.3 Score=39.31 Aligned_cols=31 Identities=26% Similarity=0.380 Sum_probs=26.7
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCC-CcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRN-TPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~-~~ivaInd 33 (364)
++|-|-| +|.||+.+++.|.+++ -+|+++..
T Consensus 36 k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r 68 (399)
T 3nzo_A 36 SRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDI 68 (399)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCCEEEEEEC
Confidence 5799999 9999999999999886 67877754
No 348
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=76.23 E-value=2.4 Score=39.51 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=28.9
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
.++|.|.| +|.||+.+++.|.+++.+|+++...
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999 8999999999999888888888653
No 349
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=75.95 E-value=1.5 Score=42.16 Aligned_cols=33 Identities=18% Similarity=0.039 Sum_probs=26.6
Q ss_pred CCceEEEEccChHHHHHHHHHhcCC-------CcEEEEeC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRN-------TPVVGIND 33 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~-------~~ivaInd 33 (364)
|++||+|+|.|.+|..+...|.+.+ .+|+.++.
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r 59 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIR 59 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEEC
Confidence 4579999999999999999887655 67766653
No 350
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=75.93 E-value=5.5 Score=38.32 Aligned_cols=139 Identities=17% Similarity=0.104 Sum_probs=71.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC--cEEEEeCCCCCHHHHHHHhhcccccc-cCCcceeecCCeEEECCEEEEEEecCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT--PVVGINDPHLSVDYLAYMLKYDSTHG-RFKGDVKTEGNNIVVNGKKIAVFQKMK 79 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~--~ivaInd~~~~~~~~a~ll~ydS~~g-~~~~~v~~~~~~l~i~gk~I~v~~~~~ 79 (364)
.||+|.|.|.||..++..+..+++ +++-+ |. +.+.+ .-..-|-.|+ .|.. .. .+.. ..+
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~-Di--~~~~~-~g~a~DL~~~~~~~~-----~~-------~i~~--t~d 83 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALV-DV--MEDKL-KGEMMDLEHGSLFLH-----TA-------KIVS--GKD 83 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEE-CS--CHHHH-HHHHHHHHHHGGGSC-----CS-------EEEE--ESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEE-EC--CHHHH-HHHHHHhhhhhhccc-----CC-------eEEE--cCC
Confidence 699999999999999988877655 55444 54 33321 1111121222 1110 01 1211 235
Q ss_pred CCCCCCcCCCccEEEeecCCCCC----H------------hhHHHHH--hCCCCEEEEeCCCCCCCeEEccc-CccccCC
Q psy8544 80 PEEIPWSQTGAEYIVESTGVFKT----K------------DTASAHL--KGGAKKVIITAPSKDAPMFVCGV-NLDKYDP 140 (364)
Q Consensus 80 p~~~~w~~~gvDiV~estG~f~s----~------------e~a~~hl--~aGakkVIIsaps~d~p~vV~gV-N~~~~~~ 140 (364)
++.+. ++|+||.++|.-.. + +.++.-. .-.+.-+++|||.. ++.+-+ ....+.
T Consensus 84 ~~~~~----daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvd---i~t~~~~k~sg~p- 155 (330)
T 3ldh_A 84 YSVSA----GSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGT---DKNKQDWKLSGLP- 155 (330)
T ss_dssp SCSCS----SCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHHHCCC-
T ss_pred HHHhC----CCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccH---HHHHHHHHHhCCC-
Confidence 55543 89999999876432 1 1111111 23454566677742 111100 011121
Q ss_pred CCCeEecCCchhhhHHhHHHHHhhhcCee
Q psy8544 141 SHSVVSNASCTTNCLAPLAKVIHDNFEIL 169 (364)
Q Consensus 141 ~~~IISnaSCTTn~Lap~lk~L~d~fGI~ 169 (364)
..+|| ..||+-=-+.+-..|-+.+|+.
T Consensus 156 ~~rVi--G~gt~LDs~R~~~~lA~~lgv~ 182 (330)
T 3ldh_A 156 MHRII--GSGCNLDSARFRYLMGERLGVH 182 (330)
T ss_dssp GGGEE--CCTTHHHHHHHHHHHHHHHTSC
T ss_pred HHHee--cccCchhHHHHHHHHHHHhCCC
Confidence 34566 4666655566677777777764
No 351
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=75.58 E-value=2.5 Score=45.12 Aligned_cols=145 Identities=17% Similarity=0.197 Sum_probs=78.6
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhc-----cc--ccccCCcceeecCCeEEECCEEEEEEe
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKY-----DS--THGRFKGDVKTEGNNIVVNGKKIAVFQ 76 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~y-----dS--~~g~~~~~v~~~~~~l~i~gk~I~v~~ 76 (364)
||||+|.|.+|..+...+...+++|+-. |. +++.+....++ +. ..++.... ... ...+..
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~aG~~V~l~-D~--~~~~l~~~~~~i~~~l~~~~~~~~~~~~-----~~~---~~~~~~-- 384 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARVGISVVAV-ES--DPKQLDAAKKIITFTLEKEASRAHQNGQ-----ASA---KPKLRF-- 384 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEE-CS--SHHHHHHHHHHHHHHHHHHHHHHHTTTC-----CCC---CCCEEE--
T ss_pred EEEEEcccHHHHHHHHHHHhCCCchhcc-cc--hHhhhhhHHHHHHHHHHHHHHhccccch-----hhh---hhhhcc--
Confidence 7999999999999998888779997644 54 55544333221 10 00111100 000 011222
Q ss_pred cCCCCCCCCcCCCccEEEeecCCCCCHh-----hHHHHHhCCCCEEEEeCCCC----------CCCe--EE-cccCcccc
Q psy8544 77 KMKPEEIPWSQTGAEYIVESTGVFKTKD-----TASAHLKGGAKKVIITAPSK----------DAPM--FV-CGVNLDKY 138 (364)
Q Consensus 77 ~~~p~~~~w~~~gvDiV~estG~f~s~e-----~a~~hl~aGakkVIIsaps~----------d~p~--vV-~gVN~~~~ 138 (364)
..+.+.+ .++|+|+||.-.-...+ ..+.++..++ ++-||.|. +.|- +. -=.|+-.+
T Consensus 385 ~~~~~~l----~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~ 458 (742)
T 3zwc_A 385 SSSTKEL----STVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHV 458 (742)
T ss_dssp ESCGGGG----GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTT
T ss_pred cCcHHHH----hhCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccccCCCCC
Confidence 2334444 37999999975544432 2345555666 88888874 2231 11 12233222
Q ss_pred CCCCCeEecCCchhhhHHhHHHHHhhhcCe
Q psy8544 139 DPSHSVVSNASCTTNCLAPLAKVIHDNFEI 168 (364)
Q Consensus 139 ~~~~~IISnaSCTTn~Lap~lk~L~d~fGI 168 (364)
-+--.||..+..+-..++-+.... +..|-
T Consensus 459 m~LVEvi~g~~Ts~e~~~~~~~~~-~~lgK 487 (742)
T 3zwc_A 459 MRLLEVIPSRYSSPTTIATVMSLS-KKIGK 487 (742)
T ss_dssp CCEEEEEECSSCCHHHHHHHHHHH-HHTTC
T ss_pred CceEEEecCCCCCHHHHHHHHHHH-HHhCC
Confidence 211248887777777777766654 34553
No 352
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=75.44 E-value=2.2 Score=40.24 Aligned_cols=32 Identities=9% Similarity=0.218 Sum_probs=26.4
Q ss_pred CceEEEEccChHHHHHHHHHhcCC----CcEEEEeC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRN----TPVVGIND 33 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~----~~ivaInd 33 (364)
.+||+|+|.|.+|..+.+.|.+.+ .+|+..+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 369999999999999999998776 67766653
No 353
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=75.20 E-value=2.3 Score=42.67 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=31.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+||||+|+|.+|+.+.+.|.+.+++|...+. +++.+..+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr---~~~~~~~l~ 42 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNR---TVSKVDDFL 42 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECS---STHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHH
Confidence 6899999999999999999888888766653 455444443
No 354
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=75.10 E-value=2.3 Score=42.55 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=25.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGI 31 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaI 31 (364)
.+|+|.|+|.||+.+++.|...++.|++.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~ 249 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVT 249 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEE
Confidence 37999999999999999998878886654
No 355
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=75.04 E-value=2.2 Score=40.14 Aligned_cols=33 Identities=30% Similarity=0.359 Sum_probs=29.0
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR-NTPVVGINDP 34 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~ 34 (364)
++||.|.| +|.||+.+++.|.++ +.+|+++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 46899999 999999999999988 8899888653
No 356
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=74.78 E-value=5.6 Score=37.90 Aligned_cols=29 Identities=17% Similarity=0.438 Sum_probs=24.7
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEe
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGIN 32 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaIn 32 (364)
+|.|.|.|.||...++++...+. .|+++.
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~ 223 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAGAARIIGVD 223 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 69999999999999998887777 677764
No 357
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=74.71 E-value=2.7 Score=39.32 Aligned_cols=39 Identities=21% Similarity=0.147 Sum_probs=29.7
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.| .|.||+..++++...+.+|+++.. +.+.+.++.
T Consensus 143 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~ 182 (325)
T 3jyn_A 143 IILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAK 182 (325)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHH
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHH
Confidence 689999 899999999988777778887754 355554444
No 358
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=74.61 E-value=2.2 Score=42.06 Aligned_cols=40 Identities=23% Similarity=0.375 Sum_probs=31.6
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
|||+|+|+|.||..+...|.+.+.+|+.++ . +++.+..+-
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d-~--~~~~~~~l~ 40 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVD-V--SSTKIDLIN 40 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEEC-S--CHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEE-C--CHHHHHHHh
Confidence 489999999999999999988888887764 3 566655443
No 359
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=74.44 E-value=2.5 Score=42.80 Aligned_cols=41 Identities=17% Similarity=0.248 Sum_probs=32.6
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
++||||+|+|.+|+.+++.|.+++++|+..|. +++.+..+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr---~~~~~~~l~ 44 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNR---TVSKVDDFL 44 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECS---STHHHHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHH
Confidence 36899999999999999999988889877654 455555554
No 360
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=74.24 E-value=4 Score=38.91 Aligned_cols=29 Identities=14% Similarity=0.365 Sum_probs=23.9
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEe
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGIN 32 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaIn 32 (364)
+|.|.|.|.||...++++...+. .|+++.
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 223 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAAGASRIIGVG 223 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence 69999999999999988876676 676664
No 361
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=74.08 E-value=2.9 Score=39.44 Aligned_cols=33 Identities=27% Similarity=0.259 Sum_probs=27.9
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|+.+|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 56 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKGYEVHGIVR 56 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence 445899999 899999999999988888887754
No 362
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=73.92 E-value=4.6 Score=37.97 Aligned_cols=38 Identities=21% Similarity=0.305 Sum_probs=28.9
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
+|.|.|.|.||+.+++++...+..|+++.. +.+.+..+
T Consensus 167 ~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~ 204 (339)
T 1rjw_A 167 WVAIYGIGGLGHVAVQYAKAMGLNVVAVDI---GDEKLELA 204 (339)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECS---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHH
Confidence 799999988999999998877778877653 35544433
No 363
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=73.77 E-value=2.7 Score=39.56 Aligned_cols=41 Identities=12% Similarity=0.142 Sum_probs=32.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLK 46 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ 46 (364)
.|||++|+|.+|+.+.+-|.+.+++++.-|. +++....+.+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr---~~~~~~~l~~ 44 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDL---VQSAVDGLVA 44 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECS---SHHHHHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcC---CHHHHHHHHH
Confidence 4899999999999999999988888876654 4666555543
No 364
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=73.54 E-value=3.2 Score=39.20 Aligned_cols=89 Identities=17% Similarity=0.166 Sum_probs=50.9
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCC
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEE 82 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~ 82 (364)
+|.|.| .|.||...++++...+.+|+++.. +.+.+.++.++ |. + ..++.+. .+. ....+
T Consensus 153 ~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~l----Ga---~-------~vi~~~~-~~~--~~~~~ 212 (346)
T 3fbg_A 153 TLLIINGAGGVGSIATQIAKAYGLRVITTAS---RNETIEWTKKM----GA---D-------IVLNHKE-SLL--NQFKT 212 (346)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEECC---SHHHHHHHHHH----TC---S-------EEECTTS-CHH--HHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhc----CC---c-------EEEECCc-cHH--HHHHH
Confidence 689995 999999999988877788887743 45555555432 11 0 1111100 000 00001
Q ss_pred CCCcCCCccEEEeecCCCCCHhhHHHHHhCCC
Q psy8544 83 IPWSQTGAEYIVESTGVFKTKDTASAHLKGGA 114 (364)
Q Consensus 83 ~~w~~~gvDiV~estG~f~s~e~a~~hl~aGa 114 (364)
+ ...++|+||||+|.....+.+-..++.|-
T Consensus 213 ~--~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G 242 (346)
T 3fbg_A 213 Q--GIELVDYVFCTFNTDMYYDDMIQLVKPRG 242 (346)
T ss_dssp H--TCCCEEEEEESSCHHHHHHHHHHHEEEEE
T ss_pred h--CCCCccEEEECCCchHHHHHHHHHhccCC
Confidence 1 12379999999996544444445555544
No 365
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=73.47 E-value=1.8 Score=38.50 Aligned_cols=29 Identities=21% Similarity=0.132 Sum_probs=25.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|.|.|+|++|+.+++.|.+++. ++.|.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid 38 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAE 38 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEES
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEE
Confidence 579999999999999999987776 77774
No 366
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=73.24 E-value=2.6 Score=40.22 Aligned_cols=38 Identities=16% Similarity=0.116 Sum_probs=27.6
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd~~~~~~~~a~l 44 (364)
+|.|+|.|.||...++++...+. .|+++.. +.+.+..+
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~---~~~~~~~a 231 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVCGASIIIAVDI---VESRLELA 231 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEECC---CHHHHHHH
Confidence 69999999999999988876676 5776643 34444333
No 367
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=73.02 E-value=2.2 Score=42.92 Aligned_cols=41 Identities=17% Similarity=0.138 Sum_probs=32.0
Q ss_pred CceEEEEccChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~ll 45 (364)
++||+|+|.|.+|..+...|.+. +.+|+.++ . +++.+..+-
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D-~--~~~~v~~l~ 51 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD-M--NTAKIAEWN 51 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC-S--CHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE-C--CHHHHHHHH
Confidence 46999999999999999988876 68888774 2 566655543
No 368
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=72.88 E-value=4.8 Score=36.31 Aligned_cols=30 Identities=30% Similarity=0.486 Sum_probs=27.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.||.|.| +|.||+.+++.|.+++.+|+++.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 43 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKNVEVIPTD 43 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEEC
T ss_pred ceEEEECCCChHHHHHHHHHHhCCCeEEecc
Confidence 6899999 99999999999998888888775
No 369
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=72.54 E-value=5 Score=38.36 Aligned_cols=39 Identities=18% Similarity=0.020 Sum_probs=30.3
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
-||||+|.|.+|+.++..+...+++|+ +-|+ +++.+...
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~-l~D~--~~~~l~~~ 45 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVK-LYDI--EPRQITGA 45 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEE-EECS--CHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEE-EEEC--CHHHHHHH
Confidence 389999999999999988888889965 4465 66654443
No 370
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=72.36 E-value=2.3 Score=42.44 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=31.0
Q ss_pred ceEEEEccChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~l 44 (364)
+||+|+|+|.+|..+...|.+. +.+|+.++ . +++.+..+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d-~--~~~~~~~l 46 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVD-V--NESRINAW 46 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC-S--CHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE-C--CHHHHHHH
Confidence 6999999999999999998876 78887774 3 56655444
No 371
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=72.33 E-value=4 Score=38.68 Aligned_cols=86 Identities=26% Similarity=0.268 Sum_probs=56.3
Q ss_pred ceEEEE-cc-ChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGIN-GF-GRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaIn-G~-G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
-+++|+ |+ |+.|+.+++.+.++++++++.-++. + .+.. +.|. +++ .+.
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~-----------------~-------~g~~--i~G~--~vy--~sl 63 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPG-----------------K-------GGKT--HLGL--PVF--NTV 63 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT-----------------C-------TTCE--ETTE--EEE--SSH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCC-----------------c-------Ccce--ECCe--eee--chH
Confidence 358888 95 9999999998887788876433441 0 0011 3343 333 122
Q ss_pred CCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEE
Q psy8544 81 EEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 81 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVII 119 (364)
++++ .+..+|+++-++......+.+...+++|++.+|+
T Consensus 64 ~el~-~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 64 KEAK-EQTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp HHHH-HHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHhh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 3332 1126899999998877778888888999998554
No 372
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=72.22 E-value=4.5 Score=38.61 Aligned_cols=29 Identities=14% Similarity=0.303 Sum_probs=24.6
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEe
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGIN 32 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaIn 32 (364)
+|.|.|.|.||...++++...+. .|+++.
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 227 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIAGASRIIAID 227 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 69999999999999998877777 677764
No 373
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=72.02 E-value=2.8 Score=41.40 Aligned_cols=108 Identities=19% Similarity=0.196 Sum_probs=60.1
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHhh-cccccccCCcceeecCCe-EEECCEEEEEEec
Q psy8544 3 YKIGING-FGRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYMLK-YDSTHGRFKGDVKTEGNN-IVVNGKKIAVFQK 77 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~ll~-ydS~~g~~~~~v~~~~~~-l~i~gk~I~v~~~ 77 (364)
-||.|.| ||-||.+.++++..+ .|+|+++..-..+.+.++...+ |...+ +-..+.. ....+ +++...
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p~~------v~v~d~~~~~~~~--~~v~~G 93 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTN------IAVADEHAAQRVG--DIPYHG 93 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCCCC------EEESCHHHHHHHC--CCSEES
T ss_pred eEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCCCE------EEEcCHHHhhhcC--CEEEec
Confidence 4799999 999999999999877 6999999762246776655442 22110 1110000 00000 111111
Q ss_pred CC-CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEe
Q psy8544 78 MK-PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120 (364)
Q Consensus 78 ~~-p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIs 120 (364)
.+ ..++- ....+|+|+-+.-.+....-.-+++++|. ++-+.
T Consensus 94 ~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK-~iaLA 135 (398)
T 2y1e_A 94 SDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTGA-RLALA 135 (398)
T ss_dssp TTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHTC-EEEEC
T ss_pred HHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCCC-ceEEc
Confidence 10 00110 00258999999866666655556788884 55553
No 374
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=71.91 E-value=3.5 Score=38.96 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=27.4
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r 60 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIR 60 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Confidence 4899999 899999999999988888887754
No 375
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=71.73 E-value=5.4 Score=38.01 Aligned_cols=29 Identities=10% Similarity=0.343 Sum_probs=24.7
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEe
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGIN 32 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaIn 32 (364)
+|.|.|.|.||...++++...+. .|+++.
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~ 224 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 224 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence 69999999999999998887777 677764
No 376
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=71.57 E-value=4.2 Score=37.79 Aligned_cols=30 Identities=13% Similarity=0.251 Sum_probs=25.7
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|.| .|.||...++++...+.+|+++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence 489999 599999999998877889888764
No 377
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=71.54 E-value=3.4 Score=37.56 Aligned_cols=30 Identities=23% Similarity=0.077 Sum_probs=25.2
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
||+|+|+|.+|+.+++.|.+.+.+|...|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 799999999999999999887777655543
No 378
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=71.51 E-value=2.3 Score=40.64 Aligned_cols=30 Identities=27% Similarity=0.128 Sum_probs=25.6
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|.|.|.||..+++++...+.+|+++..
T Consensus 183 ~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~ 212 (366)
T 2cdc_A 183 KVLVVGTGPIGVLFTLLFRTYGLEVWMANR 212 (366)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 699999999999999988776778887754
No 379
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=71.28 E-value=1.7 Score=43.46 Aligned_cols=92 Identities=23% Similarity=0.257 Sum_probs=54.0
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCE--EEEEEecCCCC
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGK--KIAVFQKMKPE 81 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk--~I~v~~~~~p~ 81 (364)
||-|.|-|+||..+++.|+++ +++.-|.. |.+..-++-. .+ .+.++++|. ...++.+.
T Consensus 237 ~v~I~GgG~ig~~lA~~L~~~-~~v~iIE~---d~~r~~~la~------~l-------~~~~Vi~GD~td~~~L~ee--- 296 (461)
T 4g65_A 237 RIMIVGGGNIGASLAKRLEQT-YSVKLIER---NLQRAEKLSE------EL-------ENTIVFCGDAADQELLTEE--- 296 (461)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-SEEEEEES---CHHHHHHHHH------HC-------TTSEEEESCTTCHHHHHHT---
T ss_pred EEEEEcchHHHHHHHHHhhhc-CceEEEec---CHHHHHHHHH------HC-------CCceEEeccccchhhHhhc---
Confidence 799999999999999998654 56655543 4544333321 01 234455442 22222222
Q ss_pred CCCCcCCCccEEEeecCCCCCH-hhHHHHHhCCCCEEEE
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTK-DTASAHLKGGAKKVII 119 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~-e~a~~hl~aGakkVII 119 (364)
.+ ..+|+++-+|+....- -.+-.+.+.|++|+|.
T Consensus 297 ~i----~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 297 NI----DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp TG----GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred Cc----hhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 22 2579999999875432 2233445679988765
No 380
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=71.25 E-value=10 Score=36.60 Aligned_cols=23 Identities=26% Similarity=0.424 Sum_probs=18.7
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR 24 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~ 24 (364)
++||+|.| .|.||+.++-.|...
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~ 47 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARG 47 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHT
T ss_pred CCEEEEECcCcHHHHHHHHHHHhc
Confidence 47999999 699999887766543
No 381
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=71.03 E-value=3.7 Score=37.79 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=28.0
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+||.|-| +|.||+.+++.|.+++.+|+++..
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 46 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVA 46 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeC
Confidence 47999999 899999999999988888888765
No 382
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=71.00 E-value=7.7 Score=37.34 Aligned_cols=38 Identities=21% Similarity=0.230 Sum_probs=28.4
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd~~~~~~~~a~l 44 (364)
+|.|.|.|.||...++++...+. .|+++.. +.+.+..+
T Consensus 188 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a 226 (398)
T 2dph_A 188 HVYIAGAGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLL 226 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHH
Confidence 69999999999999998876677 7777753 35554444
No 383
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=70.90 E-value=3.8 Score=37.97 Aligned_cols=38 Identities=24% Similarity=0.247 Sum_probs=29.6
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAY 43 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ 43 (364)
.||+|+|.|.+|..+...|...+++|+.++ . +++.+..
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d-~--~~~~~~~ 53 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVD-Q--TEDILAK 53 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC-S--CHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE-C--CHHHHHH
Confidence 479999999999999999988888877664 3 4554433
No 384
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=70.83 E-value=1.4 Score=39.69 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=27.4
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|+.+|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDI 34 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCS
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 656899999 899999999999888777766543
No 385
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=70.82 E-value=5.9 Score=37.63 Aligned_cols=40 Identities=20% Similarity=-0.001 Sum_probs=32.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
.||||+|.|.+|..+...+...+++|+.. |. +++.+..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~-d~--~~~~~~~~~ 46 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLY-DI--EPRQITGAL 46 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEE-CS--CHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEE-eC--CHHHHHHHH
Confidence 48999999999999999998888887665 44 677665554
No 386
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=70.75 E-value=3.8 Score=37.87 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=26.9
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEe
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
|..+|-|-| +|.||+.+++.|.+++.+|+++.
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~ 40 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTV 40 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEE
Confidence 346899999 99999999999998888887653
No 387
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=70.46 E-value=3.7 Score=39.85 Aligned_cols=38 Identities=21% Similarity=0.160 Sum_probs=29.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAY 43 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ 43 (364)
.+|+|.|+|.||+.+++.+...+.+|++.+- +++.+..
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~---~~~~l~~ 206 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDI---NIDKLRQ 206 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeC---CHHHHHH
Confidence 4799999999999999999877888776653 4554433
No 388
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=70.25 E-value=12 Score=37.53 Aligned_cols=83 Identities=16% Similarity=0.157 Sum_probs=51.6
Q ss_pred ceEEEEccChHHHH-HHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRL-VLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~-vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
.||.|+|.|.+|.. +++.|.+++.+|. +.|.... .....|-+ .| |.++...+++
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~-~~D~~~~-~~~~~l~~--------------~g---------i~~~~g~~~~ 77 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQIS-GSDLAPN-SVTQHLTA--------------LG---------AQIYFHHRPE 77 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEE-EECSSCC-HHHHHHHH--------------TT---------CEEESSCCGG
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEE-EEECCCC-HHHHHHHH--------------CC---------CEEECCCCHH
Confidence 47999999999996 8999998888865 4564222 22222221 11 1122223444
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCC
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGA 114 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGa 114 (364)
++. ++|+|+=+.|.-.+......+.+.|.
T Consensus 78 ~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 78 NVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp GGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred HcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 442 68999999988766555555666666
No 389
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=70.12 E-value=3.9 Score=37.23 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=27.3
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||-|.| +|.||+.+++.|.+++.+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeC
Confidence 4899999 899999999999988888887754
No 390
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=69.97 E-value=5.3 Score=37.99 Aligned_cols=29 Identities=17% Similarity=0.414 Sum_probs=24.2
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEe
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGIN 32 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaIn 32 (364)
+|.|.|.|.||...++++...+. .|+++.
T Consensus 193 ~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~ 222 (373)
T 2fzw_A 193 VCAVFGLGGVGLAVIMGCKVAGASRIIGVD 222 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 69999999999999998876677 677764
No 391
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=69.81 E-value=4.7 Score=35.12 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=27.9
Q ss_pred CceEEEEc-cChHHHHHHHHHhcC--CCcEEEEeC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHR--NTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~--~~~ivaInd 33 (364)
..+|.|.| +|.||+.+++.|.++ +.+|+++..
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 36899999 899999999999988 789887764
No 392
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=69.61 E-value=13 Score=36.92 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=56.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEE-ecCCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVF-QKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~-~~~~p~ 81 (364)
.+|.|+|.|.+|...++.|.+.+-.|+.|.. ...++ +..+.+ .+.+ .+. ...+++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~-~~~~~-~~~l~~---------------~~~i-------~~~~~~~~~~ 68 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNAL-TFIPQ-FTVWAN---------------EGML-------TLVEGPFDET 68 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEES-SCCHH-HHHHHT---------------TTSC-------EEEESSCCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcC-CCCHH-HHHHHh---------------cCCE-------EEEECCCCcc
Confidence 5799999999999999999988666655543 22332 222221 0111 111 112233
Q ss_pred CCCCcCCCccEEEeecCCC-CCHhhHHHHHhCCCCEEEEeCCC
Q psy8544 82 EIPWSQTGAEYIVESTGVF-KTKDTASAHLKGGAKKVIITAPS 123 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f-~s~e~a~~hl~aGakkVIIsaps 123 (364)
+++ ++|+||=|||.. ....-+..+.+.|...-+++.|.
T Consensus 69 ~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 69 LLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp GGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcc
Confidence 343 789999999986 45555556666777433466664
No 393
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=69.26 E-value=4 Score=41.06 Aligned_cols=42 Identities=12% Similarity=0.111 Sum_probs=33.4
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLK 46 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ 46 (364)
.|||+|+|.|.+|..+...|.+.+.+|+.++- +.+.+..+-+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~---~~~~v~~l~~ 49 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDV---DQAKIDILNN 49 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHT
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHC
Confidence 47999999999999999999888888877742 5666655543
No 394
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=68.80 E-value=4.2 Score=39.08 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=28.0
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|+|.|.|.+|+.+++++.+.++++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 3799999999999999999988999998864
No 395
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=68.76 E-value=15 Score=36.23 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=53.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCC--CHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHL--SVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKP 80 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~--~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p 80 (364)
.||.|+|.|..|..+++.|.+++.+|.+. |... .+.....|-+ .|= ++....++
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~-D~~~~~~~~~~~~L~~--------------~gi---------~~~~g~~~ 65 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVN-DGKPFDENPTAQSLLE--------------EGI---------KVVCGSHP 65 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEE-ESSCGGGCHHHHHHHH--------------TTC---------EEEESCCC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEE-eCCcccCChHHHHHHh--------------CCC---------EEEECCCh
Confidence 48999999999999999999888887544 4311 0111112211 111 12222334
Q ss_pred CCCCCcCCC-ccEEEeecCCCCCHhhHHHHHhCCCCEEEEe
Q psy8544 81 EEIPWSQTG-AEYIVESTGVFKTKDTASAHLKGGAKKVIIT 120 (364)
Q Consensus 81 ~~~~w~~~g-vDiV~estG~f~s~e~a~~hl~aGakkVIIs 120 (364)
+++ + .+ +|+|+=+.|.-.+......+.+.|. -|++
T Consensus 66 ~~~-~--~~~~d~vv~spgi~~~~p~~~~a~~~gi--~v~~ 101 (451)
T 3lk7_A 66 LEL-L--DEDFCYMIKNPGIPYNNPMVKKALEKQI--PVLT 101 (451)
T ss_dssp GGG-G--GSCEEEEEECTTSCTTSHHHHHHHHTTC--CEEC
T ss_pred HHh-h--cCCCCEEEECCcCCCCChhHHHHHHCCC--cEEe
Confidence 332 1 14 8999999998777666666777777 3454
No 396
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=68.71 E-value=4.3 Score=37.27 Aligned_cols=31 Identities=26% Similarity=0.386 Sum_probs=27.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeC
Confidence 5899999 899999999999988888887754
No 397
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=68.47 E-value=4.6 Score=38.34 Aligned_cols=32 Identities=25% Similarity=0.249 Sum_probs=27.8
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC
Confidence 35899999 899999999999888888888754
No 398
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=68.32 E-value=9 Score=36.89 Aligned_cols=95 Identities=15% Similarity=0.184 Sum_probs=56.7
Q ss_pred ceEEEEc-cChHHHHHHHH--HhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEE--EEEEe
Q psy8544 3 YKIGING-FGRIGRLVLRE--ALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKK--IAVFQ 76 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~--l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~--I~v~~ 76 (364)
+||-|.| +|+.++.++.. +.+| +.++|+.-++. + + -|| .++.++.+. +.++.
T Consensus 11 tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~----------~-~-g~~----------~~v~~G~~~~Gvpvy~ 68 (334)
T 3mwd_B 11 TKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPF----------T-G-DHK----------QKFYWGHKEILIPVFK 68 (334)
T ss_dssp CCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTT----------S-C-SEE----------EEEEETTEEEEEEEES
T ss_pred CeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCC----------C-C-Ccc----------ceEeccCccCCceeeC
Confidence 6899999 79988888877 4456 79999887762 0 0 000 122233332 45542
Q ss_pred cCCCCCCCCcCC-CccEEEeecCCCCCHhhHHHHHh-CCCCEEEE-eCC
Q psy8544 77 KMKPEEIPWSQT-GAEYIVESTGVFKTKDTASAHLK-GGAKKVII-TAP 122 (364)
Q Consensus 77 ~~~p~~~~w~~~-gvDiV~estG~f~s~e~a~~hl~-aGakkVII-sap 122 (364)
+.++++ ... ++|+++.++......+.+...+. +|++.+|+ |..
T Consensus 69 --sv~ea~-~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G 114 (334)
T 3mwd_B 69 --NMADAM-RKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEG 114 (334)
T ss_dssp --SHHHHH-HHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSC
T ss_pred --CHHHHh-hcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 222221 011 58999998876554444445565 88887776 554
No 399
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=67.95 E-value=5 Score=38.66 Aligned_cols=41 Identities=20% Similarity=0.084 Sum_probs=31.2
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
++||+|.|.|.+|..+...|.+.+.+|...+. +++.+..+-
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r---~~~~~~~i~ 69 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSY---ESDHVDEMQ 69 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECS---CHHHHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHH
Confidence 46999999999999999999887777765543 566554443
No 400
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=67.74 E-value=7.5 Score=38.02 Aligned_cols=39 Identities=18% Similarity=0.108 Sum_probs=29.9
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.| .|.||...++++...+..++++.. +.+.+..+.
T Consensus 223 ~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~---~~~~~~~~~ 262 (447)
T 4a0s_A 223 IVLIWGASGGLGSYAIQFVKNGGGIPVAVVS---SAQKEAAVR 262 (447)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHH
Confidence 689999 599999999998877888877753 455554443
No 401
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=67.49 E-value=4.9 Score=32.49 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=28.3
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDP 34 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~ 34 (364)
.+|.|+|.|..|+.+++.+.++ +++++++-|.
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 4799999999999999999876 8999988764
No 402
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=67.24 E-value=3.7 Score=40.19 Aligned_cols=31 Identities=23% Similarity=0.383 Sum_probs=26.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC-cEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT-PVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~-~ivaInd 33 (364)
.+|+|.|+|.||+.+++.|...++ +|+.+|.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 479999999999999999987788 7777764
No 403
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=67.07 E-value=4.8 Score=37.05 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=27.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeC
Confidence 5899999 999999999999988888888753
No 404
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=66.74 E-value=4.9 Score=38.09 Aligned_cols=39 Identities=18% Similarity=0.088 Sum_probs=29.8
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.| .|.||..+++++...+..|+++.. +.+.+..+.
T Consensus 170 ~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~ 209 (353)
T 4dup_A 170 SVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEACE 209 (353)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHH
Confidence 689996 899999999999877888877753 455554444
No 405
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=66.26 E-value=4.1 Score=41.29 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=54.6
Q ss_pred CceEEEEccChHHHHHHHHHhcC-CC---cEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 2 AYKIGINGFGRIGRLVLREALHR-NT---PVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~-~~---~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
+.||.|.|+|.||+.+++.+.++ ++ +|+.+ |.......+.-.+ |..+...+-
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~~~~~~-----------------------g~~~~~~~V 68 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVDVAQQY-----------------------GVSFKLQQI 68 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCCHHHHH-----------------------TCEEEECCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhhHHhhc-----------------------CCceeEEec
Confidence 36899999999999999999887 66 56544 3210000000000 101111110
Q ss_pred -CC-----CCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeCC
Q psy8544 78 -MK-----PEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITAP 122 (364)
Q Consensus 78 -~~-----p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsap 122 (364)
.+ .+.+ -.+ + |+||.++-.+.+..-+++.+++|+ -.|+..
T Consensus 69 dadnv~~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDTa 114 (480)
T 2ph5_A 69 TPQNYLEVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYINAA 114 (480)
T ss_dssp CTTTHHHHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEESS
T ss_pred cchhHHHHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEECC
Confidence 11 1111 122 3 999998877888888999999999 556544
No 406
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=66.15 E-value=4.6 Score=37.99 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=25.8
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCC-------cEEEEe
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNT-------PVVGIN 32 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~-------~ivaIn 32 (364)
++||.|.| .|.||+.+++.|.+++. +|+.+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 57999999 69999999999887753 777664
No 407
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=66.14 E-value=9.9 Score=35.65 Aligned_cols=38 Identities=13% Similarity=0.021 Sum_probs=28.6
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
+|.|.| .|.||+.+++++..++..|+++.. +.+.+..+
T Consensus 169 ~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~ 207 (343)
T 2eih_A 169 DVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRA 207 (343)
T ss_dssp EEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHH
Confidence 689999 599999999998877778877653 34444333
No 408
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=66.08 E-value=4.7 Score=39.38 Aligned_cols=38 Identities=16% Similarity=0.083 Sum_probs=30.1
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
|||+|+|.|.+|..+...|.+ +.+|+.++- +++.+..+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~---~~~~~~~l 38 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDI---LPSKVDKI 38 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECS---CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEEC---CHHHHHHH
Confidence 489999999999999999988 888877742 56655444
No 409
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=66.06 E-value=5.5 Score=36.75 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=28.3
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|++||+|.|-| .|+.+++++.+++++++.+..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDEGFETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHTTCCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhCCCEEEEEEC
Confidence 78899999988 999999999888999887753
No 410
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=65.82 E-value=5 Score=39.38 Aligned_cols=30 Identities=20% Similarity=0.164 Sum_probs=25.3
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|+|+|+|.||+.+++.+...+.+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D 202 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFD 202 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 489999999999999999887777765554
No 411
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=65.79 E-value=5.7 Score=36.85 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=27.6
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEcCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 6899999 899999999999988888888764
No 412
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=65.71 E-value=11 Score=36.06 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=28.4
Q ss_pred eEEEEccChHHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGINGFGRIGRLVLREALHRNT-PVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~-~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.|.|.||...++++...+. .|+++.. +.+.+..+.
T Consensus 188 ~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~---~~~~~~~a~ 227 (398)
T 1kol_A 188 TVYVAGAGPVGLAAAASARLLGAAVVIVGDL---NPARLAHAK 227 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCeEEEEcC---CHHHHHHHH
Confidence 68999999999999998877777 5666632 455544443
No 413
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=65.28 E-value=5.9 Score=36.14 Aligned_cols=31 Identities=23% Similarity=0.449 Sum_probs=27.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||-|.| +|.||+.+++.|.+++.+|+++..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 3899999 899999999999988888887754
No 414
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=65.05 E-value=4.6 Score=38.54 Aligned_cols=29 Identities=17% Similarity=0.318 Sum_probs=25.1
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEe
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
+|.|.| .|.||..+++++...+..|+++.
T Consensus 186 ~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~ 215 (375)
T 2vn8_A 186 RVLILGASGGVGTFAIQVMKAWDAHVTAVC 215 (375)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEe
Confidence 699999 89999999998887777887775
No 415
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=64.87 E-value=11 Score=36.01 Aligned_cols=29 Identities=3% Similarity=-0.094 Sum_probs=24.9
Q ss_pred eEEEEcc-ChHHHHHHHHHhcCCCcEEEEe
Q psy8544 4 KIGINGF-GRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 4 rVaInG~-G~IGr~vlr~l~~~~~~ivaIn 32 (364)
+|.|+|. |.||...++++...+..++++.
T Consensus 167 ~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~ 196 (371)
T 3gqv_A 167 YVLVYGGSTATATVTMQMLRLSGYIPIATC 196 (371)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 5899995 9999999999887777888774
No 416
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=64.65 E-value=5 Score=37.69 Aligned_cols=32 Identities=31% Similarity=0.260 Sum_probs=25.4
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC-cEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT-PVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~-~ivaInd~ 34 (364)
++||+|.|.|.+|..++..|...++ +|+.+ |.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~-D~ 36 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLF-DI 36 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEE-eC
Confidence 3699999999999999998887666 75444 44
No 417
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=64.51 E-value=5.9 Score=37.11 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=26.6
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
+|||+|+|-|..|-.++..|..++++++-+-
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEe
Confidence 4799999999999999988888888877663
No 418
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=64.41 E-value=4.1 Score=37.75 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=27.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCC--CcEEEEeCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRN--TPVVGINDP 34 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~--~~ivaInd~ 34 (364)
+||.|.| +|.||+.+++.|.+++ +.|+++...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 6899999 8999999999998874 888887653
No 419
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=64.35 E-value=5.7 Score=39.59 Aligned_cols=39 Identities=23% Similarity=0.191 Sum_probs=31.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+||+|.|.|.+|..+...|.+ +.+|++++ . +++.+..+-
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D-~--~~~~v~~l~ 75 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALD-I--VQAKVDMLN 75 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEEC-S--CHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEe-c--CHHHhhHHh
Confidence 699999999999999998877 88987764 3 677665554
No 420
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=64.31 E-value=4.9 Score=36.29 Aligned_cols=30 Identities=17% Similarity=0.255 Sum_probs=26.2
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||.|.| +|.||+.+++.|. ++.+|+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r 31 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDV 31 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECT
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEecc
Confidence 3899999 8999999999998 7888887754
No 421
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=64.17 E-value=6.3 Score=36.70 Aligned_cols=31 Identities=32% Similarity=0.422 Sum_probs=27.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 5899999 899999999999988888888754
No 422
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=64.07 E-value=3.4 Score=38.97 Aligned_cols=32 Identities=19% Similarity=0.065 Sum_probs=25.7
Q ss_pred CceEEEEccChHHHHHHHHHhcCC-------CcEEEEeC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRN-------TPVVGIND 33 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~-------~~ivaInd 33 (364)
++||+|+|.|.+|..+.+.|.+.+ .+|..++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r 46 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVF 46 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEc
Confidence 369999999999999999887655 67766643
No 423
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=63.88 E-value=2.6 Score=39.40 Aligned_cols=29 Identities=24% Similarity=0.387 Sum_probs=25.2
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEe
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
+|.|+| .|.||...++++...+..++++.
T Consensus 155 ~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~ 184 (321)
T 3tqh_A 155 VVLIHAGAGGVGHLAIQLAKQKGTTVITTA 184 (321)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 689998 99999999999887777888775
No 424
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=63.86 E-value=5.8 Score=38.45 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=25.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|+|+|+|.||+.+++.+...+.+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d 202 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATD 202 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 489999999999999999887777765554
No 425
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=63.81 E-value=4.8 Score=37.24 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=27.1
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC--CCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHR--NTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~--~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.++ +.+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 6899999 899999999999887 788887754
No 426
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=63.78 E-value=6.4 Score=36.20 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=27.8
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHR-NTPVVGINDP 34 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd~ 34 (364)
+||.|.| +|.||+.+++.|.++ +.+|+++...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3899999 899999999999987 7899887653
No 427
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=63.69 E-value=5 Score=36.91 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=25.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.||+|+|.|.+|+.+++.|.+.+++|...|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEEC
Confidence 5899999999999999999877777655553
No 428
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=63.65 E-value=6.6 Score=36.15 Aligned_cols=32 Identities=28% Similarity=0.243 Sum_probs=27.8
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.++|-|-| +|-||+.+++.|.+++.+|+++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEec
Confidence 36899999 899999999999988888887754
No 429
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=63.45 E-value=6.3 Score=36.17 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=27.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEEC
Confidence 6899999 899999999999988888887754
No 430
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=63.41 E-value=1.6 Score=41.18 Aligned_cols=39 Identities=23% Similarity=0.337 Sum_probs=29.5
Q ss_pred eEEEEccChHHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGINGFGRIGRLVLREALHR--NTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~--~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|.|.|.||...++++... +..|+++.. +.+.+.++.
T Consensus 173 ~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~---~~~~~~~~~ 213 (344)
T 2h6e_A 173 VVIVNGIGGLAVYTIQILKALMKNITIVGISR---SKKHRDFAL 213 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEECS---CHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC---CHHHHHHHH
Confidence 699999999999999988877 788777643 355544443
No 431
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=63.34 E-value=6 Score=40.04 Aligned_cols=31 Identities=29% Similarity=0.261 Sum_probs=27.6
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|.|.|+|++|+.+++.|.+.+.+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 3689999999999999999988899988864
No 432
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=63.16 E-value=4.8 Score=39.53 Aligned_cols=39 Identities=18% Similarity=0.136 Sum_probs=28.9
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
.||+|+|+|+||+.+++.+...+.+|++. |. +++.+.++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~-D~--~~~~l~~~ 223 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGY-DV--RPEVAEQV 223 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEE-CS--SGGGHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEE-eC--CHHHHHHH
Confidence 58999999999999999987767776655 43 34443344
No 433
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=63.10 E-value=9.8 Score=35.68 Aligned_cols=40 Identities=13% Similarity=-0.041 Sum_probs=29.8
Q ss_pred ceEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~l 44 (364)
.+|+|+|+|.+|+.+++.|.+. +++-|.|-+. +++....+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr--~~~~~~~l 176 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR--TKENAEKF 176 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS--SHHHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC--CHHHHHHH
Confidence 5899999999999999988764 7755566664 55554443
No 434
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=62.97 E-value=5.9 Score=36.14 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=25.4
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|-|.| +|.||+.+++.|.+++ .+|.+..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CEEEEEc
Confidence 4899999 8999999999999888 7777654
No 435
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=62.75 E-value=6.4 Score=37.84 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=29.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAY 43 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ 43 (364)
.+|+|.|.|.||+.+++.+...+.+|++++- +++.+..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~---~~~~~~~ 204 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDV---NHKRLQY 204 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEEC---CHHHHHH
Confidence 4899999999999999999888778776653 4554433
No 436
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=62.60 E-value=5.7 Score=36.51 Aligned_cols=31 Identities=29% Similarity=0.506 Sum_probs=26.8
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC--CCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHR--NTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~--~~~ivaInd 33 (364)
|||.|.| +|.||+.+++.|.++ +.+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 6899999 899999999999876 488887754
No 437
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=62.59 E-value=6.8 Score=36.27 Aligned_cols=31 Identities=39% Similarity=0.591 Sum_probs=27.4
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 5899999 899999999999988888887754
No 438
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=62.43 E-value=8.9 Score=35.75 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=25.4
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|.| .|.||+.+++++..++..|+++..
T Consensus 148 ~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~ 178 (333)
T 1wly_A 148 YVLIHAAAGGMGHIMVPWARHLGATVIGTVS 178 (333)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 689999 799999999999888778877754
No 439
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=62.28 E-value=8.2 Score=35.91 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=25.5
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
+|.|.| .|.||...++++..++.+++++...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~ 184 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGN 184 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 699999 5999999999887667788777653
No 440
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=62.18 E-value=9.1 Score=38.59 Aligned_cols=42 Identities=24% Similarity=0.129 Sum_probs=33.7
Q ss_pred ceEEEEc-cChHHHHHHHHHhc---C--CCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGING-FGRIGRLVLREALH---R--NTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~---~--~~~ivaInd~~~~~~~~a~ll 45 (364)
.||.|.| ||-||.+.++++.+ + .|+|+|+.. ..+.+.++...
T Consensus 78 k~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaA-g~Nv~lL~eQ~ 125 (488)
T 3au8_A 78 INVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYV-NKSVNELYEQA 125 (488)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEE-SSCHHHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEc-CCCHHHHHHHH
Confidence 4799999 99999999999987 3 699999976 34677666544
No 441
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=61.95 E-value=14 Score=34.84 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=29.8
Q ss_pred eEEEEccChHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGINGFGRIGRLVLREALHR-NTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|+|.|.||...++++... +..|+++.. +.+.+..+.
T Consensus 189 ~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~ 228 (359)
T 1h2b_A 189 YVAIVGVGGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAE 228 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHH
Confidence 699999999999999988877 788877753 355544443
No 442
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=61.94 E-value=4.2 Score=39.24 Aligned_cols=25 Identities=28% Similarity=0.190 Sum_probs=21.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCc
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTP 27 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ 27 (364)
-||.|+|.|.+|..++..|...++.
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg 143 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIG 143 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCC
Confidence 4899999999999999998866553
No 443
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=61.55 E-value=3.9 Score=38.67 Aligned_cols=24 Identities=17% Similarity=0.371 Sum_probs=20.7
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT 26 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~ 26 (364)
.||.|+|.|-+|..++..|...++
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGV 60 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGI 60 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC
Confidence 489999999999999998876544
No 444
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=61.12 E-value=11 Score=35.58 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=28.9
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
+|.|.| .|.||+.+++++...+..|+++.. +.+.+..+
T Consensus 165 ~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~ 203 (354)
T 2j8z_A 165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMA 203 (354)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHH
Confidence 689999 899999999999888778877653 34444333
No 445
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=60.93 E-value=8 Score=37.10 Aligned_cols=31 Identities=29% Similarity=0.448 Sum_probs=27.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|+|.|.|.+|+.+++++.+.+++++++..
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~ 43 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDP 43 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 4899999999999999999888999988853
No 446
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=60.91 E-value=8.6 Score=32.60 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=26.0
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|||-|.| .|.||+.+++.|. ++.+|+.+..
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r 34 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGR 34 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEES
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEec
Confidence 5899999 8999999999999 8888876643
No 447
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=60.83 E-value=11 Score=36.10 Aligned_cols=39 Identities=10% Similarity=0.167 Sum_probs=29.2
Q ss_pred eEEEE--ccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 4 KIGIN--GFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 4 rVaIn--G~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
+|.|. |.|.||...++++...+.+|+++.. +.+.+.++.
T Consensus 173 ~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~---~~~~~~~~~ 213 (379)
T 3iup_A 173 SALVHTAAASNLGQMLNQICLKDGIKLVNIVR---KQEQADLLK 213 (379)
T ss_dssp SCEEESSTTSHHHHHHHHHHHHHTCCEEEEES---SHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHH
Confidence 57898 7999999999988766778888753 455554444
No 448
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=60.60 E-value=7.5 Score=35.79 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=26.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
|+|-|-| +|.||+.+++.|.+++.+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3899999 89999999999998888888774
No 449
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=60.53 E-value=6 Score=37.29 Aligned_cols=29 Identities=38% Similarity=0.516 Sum_probs=24.2
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC--cEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT--PVVGI 31 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~--~ivaI 31 (364)
+||+|.|.|.+|..++..|...+. +|+.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~ 31 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLI 31 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEE
Confidence 489999999999999998877666 76655
No 450
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=60.04 E-value=7.4 Score=36.63 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=25.7
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|.| .|.||+..++++...+.+++++..
T Consensus 162 ~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~ 192 (342)
T 4eye_A 162 TVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN 192 (342)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 689999 599999999998877778887754
No 451
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=59.81 E-value=7.5 Score=38.49 Aligned_cols=31 Identities=26% Similarity=0.194 Sum_probs=25.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
.||+|+|+|+||+.+++.+...+.+|++ -|.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v-~D~ 221 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSA-TDV 221 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-ECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEE-EcC
Confidence 5899999999999999999877777654 454
No 452
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=59.63 E-value=8.5 Score=34.93 Aligned_cols=33 Identities=21% Similarity=0.131 Sum_probs=28.6
Q ss_pred CCceEEEEccCh---------HHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGINGFGR---------IGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG~G~---------IGr~vlr~l~~~~~~ivaInd 33 (364)
|++||+|.|-|. -|+.++++|.+++++++.++.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~ 42 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDP 42 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEec
Confidence 788999999887 789999999888999887753
No 453
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=59.49 E-value=12 Score=37.80 Aligned_cols=40 Identities=28% Similarity=0.262 Sum_probs=32.3
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
..+|-|.|+|++|+.+++.|.+.+.+++.|.. +++.+-.+
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~~vvvid~---~~~~~~~~ 166 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNHLFVVVTD---NYDQALHL 166 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTCCEEEEES---CHHHHHHH
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEEC---CHHHHHHH
Confidence 35799999999999999999888889988864 56654333
No 454
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=59.31 E-value=8.6 Score=35.02 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=27.4
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|-|-| +|.||+.+++.|.+++.+|+++..
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r 44 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSR 44 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCEEEEEec
Confidence 5899999 899999999999988888887754
No 455
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=59.15 E-value=8.3 Score=35.64 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=27.4
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 6899999 899999999999988888887754
No 456
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=59.13 E-value=8 Score=36.52 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=27.6
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+|.|-| +|.||+.+++.|.+++.+|+++..
T Consensus 12 ~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 12 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEe
Confidence 6899999 999999999999988888888754
No 457
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=59.13 E-value=28 Score=32.68 Aligned_cols=43 Identities=28% Similarity=0.375 Sum_probs=28.3
Q ss_pred CccEEEeecCC--CCCHhhHHHHHhCCCCEEEEeCCCC--CCCeEEcccCccccC
Q psy8544 89 GAEYIVESTGV--FKTKDTASAHLKGGAKKVIITAPSK--DAPMFVCGVNLDKYD 139 (364)
Q Consensus 89 gvDiV~estG~--f~s~e~a~~hl~aGakkVIIsaps~--d~p~vV~gVN~~~~~ 139 (364)
.+|+||-++|. +++.++ ++.|+ |||+-... +.- ++-.|. +...
T Consensus 203 ~ADIVI~Avg~p~~I~~~~----vk~Ga--vVIDVgi~r~~~g-lvGDVd-~~v~ 249 (281)
T 2c2x_A 203 QADIVVAAVGVAHLLTADM----VRPGA--AVIDVGVSRTDDG-LVGDVH-PDVW 249 (281)
T ss_dssp TCSEEEECSCCTTCBCGGG----SCTTC--EEEECCEEEETTE-EEESBC-GGGG
T ss_pred hCCEEEECCCCCcccCHHH----cCCCc--EEEEccCCCCCCC-ccCccc-cchh
Confidence 68999999965 556554 46688 99987642 112 667777 5443
No 458
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=59.04 E-value=8.1 Score=36.74 Aligned_cols=38 Identities=18% Similarity=0.334 Sum_probs=29.0
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
+|.|.| .|.||..+++++...+..|+++.. +.+.+..+
T Consensus 166 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~ 204 (362)
T 2c0c_A 166 KVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFL 204 (362)
T ss_dssp EEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHH
Confidence 689999 899999999998877778877653 34444444
No 459
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=58.91 E-value=6.8 Score=36.53 Aligned_cols=30 Identities=33% Similarity=0.489 Sum_probs=24.5
Q ss_pred ceEEEEccChHHHHHHHHHhcCC--CcEEEEe
Q psy8544 3 YKIGINGFGRIGRLVLREALHRN--TPVVGIN 32 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~--~~ivaIn 32 (364)
+||+|.|.|.+|..++..|..++ -+|+.++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d 33 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFID 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEc
Confidence 69999999999999999887766 4665553
No 460
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=58.87 E-value=6.3 Score=37.37 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=25.4
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCC--CcEEEEe
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRN--TPVVGIN 32 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~--~~ivaIn 32 (364)
++||+|.| .|.||..++..|.+++ -+|+.+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~D 41 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYD 41 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEe
Confidence 57999999 8999999999887765 4676653
No 461
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=58.75 E-value=8.7 Score=35.34 Aligned_cols=31 Identities=23% Similarity=0.435 Sum_probs=26.6
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC---C---CcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHR---N---TPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~---~---~~ivaInd 33 (364)
|||.|.| +|.||+.+++.|.++ + .+|+++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 3899999 899999999999885 6 88888754
No 462
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=58.65 E-value=9.2 Score=35.52 Aligned_cols=38 Identities=11% Similarity=0.117 Sum_probs=28.5
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
+|.|.| .|.||+.+++++..++.+|+++.. +.+.+..+
T Consensus 143 ~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~ 181 (327)
T 1qor_A 143 QFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSA 181 (327)
T ss_dssp EEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHH
Confidence 689999 899999999988777778877643 34444343
No 463
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=58.17 E-value=7.1 Score=35.03 Aligned_cols=24 Identities=17% Similarity=0.369 Sum_probs=21.4
Q ss_pred CceEEEEc-cChHHHHHHHHHhcCC
Q psy8544 2 AYKIGING-FGRIGRLVLREALHRN 25 (364)
Q Consensus 2 ~irVaInG-~G~IGr~vlr~l~~~~ 25 (364)
++||.|.| +|.||+.+++.|.+++
T Consensus 6 ~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 6 SMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHhcC
Confidence 47999999 8999999999998763
No 464
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=58.05 E-value=10 Score=34.23 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=26.9
Q ss_pred eEEEEc-cChHHHHHHHHHhcCC-CcEEEEeCC
Q psy8544 4 KIGING-FGRIGRLVLREALHRN-TPVVGINDP 34 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~-~~ivaInd~ 34 (364)
||.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 588999 8999999999999886 888888653
No 465
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=57.92 E-value=9.3 Score=34.90 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=27.6
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|+.+|.|+|-|.+|-.++..|.+++++|+-+..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEEC
Confidence 677999999999999999999888888776643
No 466
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=57.28 E-value=6.2 Score=37.05 Aligned_cols=30 Identities=17% Similarity=0.228 Sum_probs=24.6
Q ss_pred eEEEEcc-ChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGINGF-GRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG~-G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|.|.|. |.||...++++...+.+|+++..
T Consensus 147 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~ 177 (340)
T 3gms_A 147 VLLVNACGSAIGHLFAQLSQILNFRLIAVTR 177 (340)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEEeCCccHHHHHHHHHHHHcCCEEEEEeC
Confidence 6899995 59999999988766778887754
No 467
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=57.27 E-value=9.2 Score=36.12 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=27.6
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCC-CcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRN-TPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~-~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 5899999 8999999999999887 89988754
No 468
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=56.91 E-value=9.8 Score=35.36 Aligned_cols=31 Identities=16% Similarity=0.074 Sum_probs=27.5
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEeC
Confidence 6899999 899999999999988888887764
No 469
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=56.72 E-value=33 Score=32.12 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=52.8
Q ss_pred ceEEEEccC-hHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFG-RIGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G-~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
-++.|+|.| .+|+.+.+.|..++..+...+.-..+++.
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~----------------------------------------- 189 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGS----------------------------------------- 189 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH-----------------------------------------
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHH-----------------------------------------
Confidence 378999976 58999999998877665433211001100
Q ss_pred CCCCcCCCccEEEeecCC--CCCHhhHHHHHhCCCCEEEEeCCCC-CCCeEEcccCccccC
Q psy8544 82 EIPWSQTGAEYIVESTGV--FKTKDTASAHLKGGAKKVIITAPSK-DAPMFVCGVNLDKYD 139 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~--f~s~e~a~~hl~aGakkVIIsaps~-d~p~vV~gVN~~~~~ 139 (364)
.+ ..+|+||-++|. +++.++ ++.|+ |||+-... ...-++-.|+.+...
T Consensus 190 ~~----~~ADIVI~Avg~p~~I~~~~----vk~Ga--vVIDvgi~~~~gkl~GDVdf~~v~ 240 (276)
T 3ngx_A 190 MT----RSSKIVVVAVGRPGFLNREM----VTPGS--VVIDVGINYVNDKVVGDANFEDLS 240 (276)
T ss_dssp HH----HHSSEEEECSSCTTCBCGGG----CCTTC--EEEECCCEEETTEEECSBCHHHHH
T ss_pred hh----ccCCEEEECCCCCccccHhh----ccCCc--EEEEeccCccCCceeccccHHHHh
Confidence 00 146888888865 455544 47788 99986642 123567777766543
No 470
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=56.58 E-value=9.5 Score=38.04 Aligned_cols=40 Identities=15% Similarity=0.195 Sum_probs=31.6
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
.+|+||.|.|.+|..+...|.+.+++|+..+- +++.+..|
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~---~~~kv~~l 47 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDK---DARKIELL 47 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CSTTHHHH
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHH
Confidence 47999999999999999999888889887753 44444344
No 471
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=56.55 E-value=12 Score=37.39 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=31.6
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHh
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYML 45 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll 45 (364)
-+|+|+|+|.||-.+.-++.+.+++|+++ |. |++.+..|-
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~-Di--d~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGY-DV--NPSIVERLR 61 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEE-CS--CHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEE-EC--CHHHHHHHH
Confidence 48999999999987777777778999888 54 777765543
No 472
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=56.08 E-value=12 Score=33.30 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=28.0
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEe
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
|+.+|.|+|-|..|-..+..|.+++++++-|.
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie 32 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVD 32 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEe
Confidence 77899999999999999998888777877775
No 473
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=55.91 E-value=10 Score=35.36 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=27.8
Q ss_pred ceEEEEc-cChHHHHHHHHHhc--CCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALH--RNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~--~~~~ivaInd 33 (364)
++|-|-| +|.||+.+++.|.+ ++.+|+++..
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 5899999 89999999999998 7889988865
No 474
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=55.91 E-value=11 Score=35.47 Aligned_cols=30 Identities=10% Similarity=0.107 Sum_probs=23.6
Q ss_pred eEEEE-ccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGIN-GFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaIn-G~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|-|. |.|.||...++++...+.+|+++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 45666 5999999999988777778887754
No 475
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=55.18 E-value=11 Score=35.61 Aligned_cols=29 Identities=21% Similarity=0.179 Sum_probs=24.6
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC-cEEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT-PVVGI 31 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~-~ivaI 31 (364)
.||+|.|.|.+|..++..+..+++ +|+-+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~ 38 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLV 38 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEE
Confidence 489999999999999998887777 76544
No 476
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=54.55 E-value=6.6 Score=41.19 Aligned_cols=103 Identities=14% Similarity=0.197 Sum_probs=51.9
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCC-CCCHHHHHHHhhcc-cccccCCcceeecCCeEEEC-CEEEEEEecC-
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDP-HLSVDYLAYMLKYD-STHGRFKGDVKTEGNNIVVN-GKKIAVFQKM- 78 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~-~~~~~~~a~ll~yd-S~~g~~~~~v~~~~~~l~i~-gk~I~v~~~~- 78 (364)
.||.|+|.|.+|..+++.|...++-=+.|-|. .+++..+.+-+-|. +.-|+....+-.+ .-..+| +-.|.....+
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~-~L~~iNP~v~V~a~~~~i 96 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKE-SVLQFYPKANIVAYHDSI 96 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHH-HHHTTCTTCEEEEEESCT
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHH-HHHHHCCCCeEEEEeccc
Confidence 58999999999999999988656533333332 23444333322222 1225443321110 000011 1223333221
Q ss_pred CCCCCC--CcCCCccEEEeecCCCCCHhhHH
Q psy8544 79 KPEEIP--WSQTGAEYIVESTGVFKTKDTAS 107 (364)
Q Consensus 79 ~p~~~~--w~~~gvDiV~estG~f~s~e~a~ 107 (364)
...++. +- .+.|+||+|+..+.++...-
T Consensus 97 ~~~~~~~~~~-~~~DlVvda~Dn~~aR~~ln 126 (640)
T 1y8q_B 97 MNPDYNVEFF-RQFILVMNALDNRAARNHVN 126 (640)
T ss_dssp TSTTSCHHHH-TTCSEEEECCSCHHHHHHHH
T ss_pred chhhhhHhhh-cCCCEEEECCCCHHHHHHHH
Confidence 112221 11 37899999998876654443
No 477
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=54.52 E-value=11 Score=35.04 Aligned_cols=31 Identities=26% Similarity=0.261 Sum_probs=27.2
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
++|.|.| +|.||+.+++.|.+++.+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEEC
Confidence 5899999 899999999999988888887754
No 478
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=54.46 E-value=8.6 Score=35.68 Aligned_cols=31 Identities=39% Similarity=0.559 Sum_probs=26.8
Q ss_pred ceEEEEc-cChHHHHHHHHHhcC-CCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHR-NTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~-~~~ivaInd 33 (364)
|||.|.| +|.||+.+++.|.++ +.+|+++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 3899999 899999999999887 788887754
No 479
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=54.39 E-value=9.1 Score=36.55 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=25.4
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC--cEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT--PVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~--~ivaInd~ 34 (364)
.+||+|.|.|.||..++..|..+++ +|+.+ |.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~-D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVI-DV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEE-ec
Confidence 4699999999999999998877654 66544 54
No 480
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=54.19 E-value=12 Score=34.91 Aligned_cols=32 Identities=19% Similarity=0.319 Sum_probs=27.4
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCC-CcEEEEeCC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRN-TPVVGINDP 34 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~-~~ivaInd~ 34 (364)
++|.|.| +|.||+.+++.|.+++ .+|+++...
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 5899999 8999999999999886 888888653
No 481
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=53.52 E-value=11 Score=35.89 Aligned_cols=33 Identities=12% Similarity=-0.035 Sum_probs=27.3
Q ss_pred CCceEEEEccChHHHHHHHHHhcCCCcEEEEeCC
Q psy8544 1 MAYKIGINGFGRIGRLVLREALHRNTPVVGINDP 34 (364)
Q Consensus 1 m~irVaInG~G~IGr~vlr~l~~~~~~ivaInd~ 34 (364)
|+|+|||+|-| -|+.+++++.+.+++++++...
T Consensus 1 ~~~~I~~lGsg-l~~~~~~aAk~lG~~viv~d~~ 33 (320)
T 2pbz_A 1 MSLIVSTIASH-SSLQILLGAKKEGFKTRLYVSP 33 (320)
T ss_dssp ---CEEEESST-THHHHHHHHHHTTCCEEEEECT
T ss_pred CceEEEEEcCH-hHHHHHHHHHHCCCEEEEEECC
Confidence 78999999999 8999999998889999888764
No 482
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=53.51 E-value=11 Score=35.38 Aligned_cols=31 Identities=29% Similarity=0.449 Sum_probs=27.4
Q ss_pred ceEEEEc-cChHHHHHHHHHh-cCCCcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREAL-HRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~-~~~~~ivaInd 33 (364)
|+|-|.| +|.||+.+++.|. +++.+|+++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEec
Confidence 5899999 8999999999999 88888888754
No 483
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=53.41 E-value=12 Score=34.06 Aligned_cols=30 Identities=17% Similarity=0.308 Sum_probs=26.2
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCCCcEEEEe
Q psy8544 3 YKIGING-FGRIGRLVLREALHRNTPVVGIN 32 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~~~ivaIn 32 (364)
.+|.|-| +|.||+.+++.|.+++.+|+++.
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEE
Confidence 3789999 89999999999998888887764
No 484
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=53.28 E-value=12 Score=32.98 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=24.9
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
||.|.| +|.||+.+++.|.+ +.+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r 31 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYN 31 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEES
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecC
Confidence 899999 89999999999985 678877654
No 485
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=53.12 E-value=8.5 Score=35.69 Aligned_cols=31 Identities=23% Similarity=0.133 Sum_probs=27.3
Q ss_pred ceEEEEc-cChHHHHHHHHHhcCC-----CcEEEEeC
Q psy8544 3 YKIGING-FGRIGRLVLREALHRN-----TPVVGIND 33 (364)
Q Consensus 3 irVaInG-~G~IGr~vlr~l~~~~-----~~ivaInd 33 (364)
+||.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 5899999 8999999999998886 88888765
No 486
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=53.08 E-value=41 Score=33.35 Aligned_cols=81 Identities=21% Similarity=0.239 Sum_probs=55.4
Q ss_pred ceEEEEccC----hHHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEec
Q psy8544 3 YKIGINGFG----RIGRLVLREALHR-NTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQK 77 (364)
Q Consensus 3 irVaInG~G----~IGr~vlr~l~~~-~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~ 77 (364)
-+|||+|.+ ++|+.+++.|.+. .-+|..||-- ++. +.|. +++
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~------------~~~-----------------i~G~--~~y-- 55 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK------------EEE-----------------VQGV--KAY-- 55 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS------------CSE-----------------ETTE--ECB--
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCC------------CCe-----------------ECCE--ecc--
Confidence 479999954 8999999999877 5777777631 111 2332 232
Q ss_pred CCCCCCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEE
Q psy8544 78 MKPEEIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVII 119 (364)
Q Consensus 78 ~~p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVII 119 (364)
.+.++++ ..+|+++-++......+..+...++|+|.+|+
T Consensus 56 ~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 56 KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 3345554 26899988887777777777788889987654
No 487
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=52.77 E-value=40 Score=31.69 Aligned_cols=85 Identities=21% Similarity=0.266 Sum_probs=51.7
Q ss_pred eEEEEccCh-HHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCCC
Q psy8544 4 KIGINGFGR-IGRLVLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPEE 82 (364)
Q Consensus 4 rVaInG~G~-IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~~ 82 (364)
++.|+|.|. +|+.+.++|..++..+...+.-..+++ +.
T Consensus 163 ~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-----------------------------------------~~ 201 (285)
T 3l07_A 163 YAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK-----------------------------------------SH 201 (285)
T ss_dssp EEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-----------------------------------------HH
T ss_pred EEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH-----------------------------------------Hh
Confidence 688999766 799999998887666533321100000 00
Q ss_pred CCCcCCCccEEEeecCC--CCCHhhHHHHHhCCCCEEEEeCCCCC-CCeEEcccCccccC
Q psy8544 83 IPWSQTGAEYIVESTGV--FKTKDTASAHLKGGAKKVIITAPSKD-APMFVCGVNLDKYD 139 (364)
Q Consensus 83 ~~w~~~gvDiV~estG~--f~s~e~a~~hl~aGakkVIIsaps~d-~p~vV~gVN~~~~~ 139 (364)
+ ..+|+||-++|. +++.+ +++.|+ |||+-...- .--++-.|+.+...
T Consensus 202 ~----~~ADIVI~Avg~p~~I~~~----~vk~Ga--vVIDvgi~~~~g~l~GDVdf~~v~ 251 (285)
T 3l07_A 202 T----TKADILIVAVGKPNFITAD----MVKEGA--VVIDVGINHVDGKIVGDVDFAAVK 251 (285)
T ss_dssp H----TTCSEEEECCCCTTCBCGG----GSCTTC--EEEECCCEEETTEEECSBCHHHHT
T ss_pred c----ccCCEEEECCCCCCCCCHH----HcCCCc--EEEEecccCcCCceecCccHHHHH
Confidence 1 157899998864 34444 346788 999866421 12466777766554
No 488
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=52.64 E-value=11 Score=35.86 Aligned_cols=32 Identities=25% Similarity=0.198 Sum_probs=25.2
Q ss_pred CceEEEEccChHHHHHHHHHhcCCC-cEEEEeCC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNT-PVVGINDP 34 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~-~ivaInd~ 34 (364)
++||+|.|.|.+|..++..|...++ + |.+-|.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~ 41 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELAD-VVLYDV 41 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 3699999999999999988876655 7 445554
No 489
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=51.92 E-value=18 Score=34.06 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=30.7
Q ss_pred ceEEEEccChHHHHHHHHHhc-CCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALH-RNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~-~~~~ivaInd~~~~~~~~a~l 44 (364)
.+|+|+|.|.+|+..+++|.+ ++++.|.|-+. +++....+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r--~~~~a~~l 166 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV--REKAAKKF 166 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS--SHHHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC--CHHHHHHH
Confidence 589999999999999999876 46777777775 56554333
No 490
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=50.87 E-value=12 Score=32.38 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=26.7
Q ss_pred CCceEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 1 MAYKIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 1 m~irVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
|..+|-|.| .|-||+.+++.|.+++.+|+.+..
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r 34 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDL 34 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcc
Confidence 445789999 899999999999888778776643
No 491
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=50.72 E-value=7.8 Score=36.34 Aligned_cols=35 Identities=17% Similarity=0.033 Sum_probs=28.1
Q ss_pred eEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q psy8544 4 KIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLA 42 (364)
Q Consensus 4 rVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a 42 (364)
+|.|.|+|++|+.+++.|.+++. ++.|. . |++.+.
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~g~-v~vid-~--~~~~~~ 151 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGSEV-FVLAE-D--ENVRKK 151 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGSCE-EEEES-C--GGGHHH
T ss_pred CEEEECCcHHHHHHHHHHHhCCc-EEEEe-C--Chhhhh
Confidence 79999999999999999988877 77774 3 565543
No 492
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=50.43 E-value=15 Score=35.58 Aligned_cols=32 Identities=31% Similarity=0.396 Sum_probs=28.4
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+||.|.|-|..|+.+++++.+.+++++++..
T Consensus 19 ~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~ 50 (433)
T 2dwc_A 19 AQKILLLGSGELGKEIAIEAQRLGVEVVAVDR 50 (433)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 35899999999999999999888999988864
No 493
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=50.11 E-value=53 Score=31.08 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=20.3
Q ss_pred ceEEEEccCh-HHHHHHHHHhcCCCcE
Q psy8544 3 YKIGINGFGR-IGRLVLREALHRNTPV 28 (364)
Q Consensus 3 irVaInG~G~-IGr~vlr~l~~~~~~i 28 (364)
-+|.|+|.|. ||+.+.+.|...+-.+
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtV 192 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATV 192 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeE
Confidence 3788999885 7999998888776554
No 494
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=49.65 E-value=12 Score=35.22 Aligned_cols=35 Identities=26% Similarity=0.352 Sum_probs=25.9
Q ss_pred ceEEEEccChHHHHHHHHHhcCCC--cEEEEeCCCCCHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNT--PVVGINDPHLSVDY 40 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~--~ivaInd~~~~~~~ 40 (364)
|||+|.|.|.+|..++..|..+++ +|+-+ |. +++.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~-D~--~~~~ 37 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALV-DI--AEDL 37 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEE-CS--SHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEE-EC--ChHH
Confidence 499999999999999988876654 65444 54 4443
No 495
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=49.47 E-value=16 Score=34.63 Aligned_cols=31 Identities=32% Similarity=0.440 Sum_probs=27.4
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.||+|.|-|..|+.+++++.+.+++++.+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMGFYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4899999999999999999888889888754
No 496
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=49.42 E-value=15 Score=35.21 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=29.8
Q ss_pred ceEEEEccChHHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q psy8544 3 YKIGINGFGRIGRLVLREALHRNTPVVGINDPHLSVDYLAYM 44 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~~~~ivaInd~~~~~~~~a~l 44 (364)
-+|.|.|.|.+|+.+++.+...+.+|++++. +++.+..+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr---~~~r~~~~ 206 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDI---NVERLSYL 206 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeC---CHHHHHHH
Confidence 4799999999999999999888777776654 45544333
No 497
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=48.87 E-value=17 Score=34.31 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=28.1
Q ss_pred CceEEEEccChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 2 AYKIGINGFGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 2 ~irVaInG~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
.+||.|.|-|..|+.+++++.+.+++++++..
T Consensus 11 ~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~ 42 (391)
T 1kjq_A 11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDR 42 (391)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEC
Confidence 36999999999999999999888889888864
No 498
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=48.87 E-value=17 Score=31.61 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=26.2
Q ss_pred eEEEEc-cChHHHHHHHHHhcCCCcEEEEeC
Q psy8544 4 KIGING-FGRIGRLVLREALHRNTPVVGIND 33 (364)
Q Consensus 4 rVaInG-~G~IGr~vlr~l~~~~~~ivaInd 33 (364)
+|-|.| .|-||+.+++.|.+++.+|+++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC
Confidence 689999 899999999999988888877754
No 499
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=48.49 E-value=12 Score=38.11 Aligned_cols=28 Identities=21% Similarity=0.275 Sum_probs=24.3
Q ss_pred ceEEEEccChHHHHHHHHHhcC------CCcEEE
Q psy8544 3 YKIGINGFGRIGRLVLREALHR------NTPVVG 30 (364)
Q Consensus 3 irVaInG~G~IGr~vlr~l~~~------~~~iva 30 (364)
.||||+|+|.+|+.+++.|.+. +++++.
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViV 88 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKI 88 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEE
Confidence 4899999999999999999876 787653
No 500
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=48.34 E-value=50 Score=33.19 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=53.7
Q ss_pred ceEEEEccChHHHH-HHHHHhcCCCcEEEEeCCCCCHHHHHHHhhcccccccCCcceeecCCeEEECCEEEEEEecCCCC
Q psy8544 3 YKIGINGFGRIGRL-VLREALHRNTPVVGINDPHLSVDYLAYMLKYDSTHGRFKGDVKTEGNNIVVNGKKIAVFQKMKPE 81 (364)
Q Consensus 3 irVaInG~G~IGr~-vlr~l~~~~~~ivaInd~~~~~~~~a~ll~ydS~~g~~~~~v~~~~~~l~i~gk~I~v~~~~~p~ 81 (364)
.||-++|.|-+|.. ++++|.+++.+|. +.|....+.....|-+ . | |.++...+++
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G~~V~-~sD~~~~~~~~~~L~~--------------~-------g--i~~~~G~~~~ 75 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALGHTVT-GSDANIYPPMSTQLEQ--------------A-------G--VTIEEGYLIA 75 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEE-EEESCCCTTHHHHHHH--------------T-------T--CEEEESCCGG
T ss_pred CEEEEEEecHhhHHHHHHHHHhCCCEEE-EECCCCCcHHHHHHHH--------------C-------C--CEEECCCCHH
Confidence 47999999999996 6787877888864 4554212222222211 1 1 1222223455
Q ss_pred CCCCcCCCccEEEeecCCCCCHhhHHHHHhCCCCEEEEeC
Q psy8544 82 EIPWSQTGAEYIVESTGVFKTKDTASAHLKGGAKKVIITA 121 (364)
Q Consensus 82 ~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVIIsa 121 (364)
++. .++|+||=+.|.-.+......+.+.|. -|++-
T Consensus 76 ~~~---~~~d~vV~Spgi~~~~p~l~~a~~~gi--~v~~~ 110 (524)
T 3hn7_A 76 HLQ---PAPDLVVVGNAMKRGMDVIEYMLDTGL--RYTSG 110 (524)
T ss_dssp GGC---SCCSEEEECTTCCTTSHHHHHHHHHTC--CEEEH
T ss_pred HcC---CCCCEEEECCCcCCCCHHHHHHHHCCC--cEEEH
Confidence 442 258999999988776665666666776 35543
Done!