BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8547
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QWS8|KCNH8_RAT Potassium voltage-gated channel subfamily H member 8 OS=Rattus
norvegicus GN=Kcnh8 PE=2 SV=2
Length = 1102
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGD 108
G PFWCLLDIVPIKNEK +VVL+LAS KD+T+TK+ +++ + D
Sbjct: 104 GAPFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITSEDKKED 148
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 14 PFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGD 56
PFWCLLDIVPIKNEK +VVL+LAS KD+T+TK+ +++ + D
Sbjct: 106 PFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITSEDKKED 148
>sp|P59111|KCNH8_MOUSE Potassium voltage-gated channel subfamily H member 8 OS=Mus
musculus GN=Kcnh8 PE=2 SV=2
Length = 1102
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGD 108
G PFWCLLDIVPIKNEK +VVL+LAS KD+T+TK+ +++ + D
Sbjct: 104 GAPFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITSEDKKED 148
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 14 PFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGD 56
PFWCLLDIVPIKNEK +VVL+LAS KD+T+TK+ +++ + D
Sbjct: 106 PFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITSEDKKED 148
>sp|Q96L42|KCNH8_HUMAN Potassium voltage-gated channel subfamily H member 8 OS=Homo
sapiens GN=KCNH8 PE=2 SV=2
Length = 1107
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGD 108
G+PFWCLLDIVPIKNEK +VVL+LAS KD+T+TK+ ++ + D
Sbjct: 104 GSPFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITPEDKKED 148
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 13 TPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGD 56
+PFWCLLDIVPIKNEK +VVL+LAS KD+T+TK+ ++ + D
Sbjct: 105 SPFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITPEDKKED 148
>sp|O89047|KCNH3_RAT Potassium voltage-gated channel subfamily H member 3 OS=Rattus
norvegicus GN=Kcnh3 PE=2 SV=1
Length = 1087
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADN 104
G PFWCLLD++PIKNEK EV L+L SHKD++ TK DN
Sbjct: 104 GLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGGPDN 144
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 9 YRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADN 52
YR+ PFWCLLD++PIKNEK EV L+L SHKD++ TK DN
Sbjct: 100 YRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGGPDN 144
>sp|Q9WVJ0|KCNH3_MOUSE Potassium voltage-gated channel subfamily H member 3 OS=Mus
musculus GN=Kcnh3 PE=2 SV=2
Length = 1087
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADN 104
G PFWCLLD++PIKNEK EV L+L SHKD++ TK DN
Sbjct: 104 GLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGGPDN 144
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 9 YRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADN 52
YR+ PFWCLLD++PIKNEK EV L+L SHKD++ TK DN
Sbjct: 100 YRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGGPDN 144
>sp|Q9ULD8|KCNH3_HUMAN Potassium voltage-gated channel subfamily H member 3 OS=Homo
sapiens GN=KCNH3 PE=2 SV=2
Length = 1083
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTK 97
G PFWCLLD++PIKNEK EV L+L SHKD++ TK
Sbjct: 104 GLPFWCLLDVIPIKNEKGEVALFLVSHKDISETK 137
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 9 YRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVTNTK 45
YR+ PFWCLLD++PIKNEK EV L+L SHKD++ TK
Sbjct: 100 YRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETK 137
>sp|Q9UQ05|KCNH4_HUMAN Potassium voltage-gated channel subfamily H member 4 OS=Homo
sapiens GN=KCNH4 PE=2 SV=1
Length = 1017
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 54 EGDYEDMQEL------GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMA-DNGE 106
EG E E+ G+ FWCLLD++PIKNE EVVL+L S KD+T + + G
Sbjct: 88 EGHQEHRAEICFYRKDGSAFWCLLDMMPIKNEMGEVVLFLFSFKDITQSGSPGLGPQGGR 147
Query: 107 GD 108
GD
Sbjct: 148 GD 149
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 9 YRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMA-DNGEGDYEDMQELG 64
YR+ + FWCLLD++PIKNE EVVL+L S KD+T + + G GD LG
Sbjct: 100 YRKDGSAFWCLLDMMPIKNEMGEVVLFLFSFKDITQSGSPGLGPQGGRGDSNHENSLG 157
>sp|Q9R1T9|KCNH4_RAT Potassium voltage-gated channel subfamily H member 4 OS=Rattus
norvegicus GN=Kcnh4 PE=2 SV=1
Length = 1017
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 54 EGDYEDMQEL------GTPFWCLLDIVPIKNEKREVVLYLASHKDVT 94
EG E E+ G+ FWCLLD++PIKNE EVVL+L S KD++
Sbjct: 88 EGHQEHRAEICFYRKDGSAFWCLLDMMPIKNELGEVVLFLFSFKDIS 134
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Query: 9 YRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVT 42
YR+ + FWCLLD++PIKNE EVVL+L S KD++
Sbjct: 100 YRKDGSAFWCLLDMMPIKNELGEVVLFLFSFKDIS 134
>sp|Q02280|KCNAE_DROME Potassium voltage-gated channel protein eag OS=Drosophila
melanogaster GN=eag PE=1 SV=2
Length = 1174
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 11 QRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 55
Q TP W LL + PI+NE+ VVL+L + +D+T K +++ +G
Sbjct: 123 QETPLWLLLQVAPIRNERDLVVLFLLTFRDITALKQPIDSEDTKG 167
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 61 QELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 107
Q TP W LL + PI+NE+ VVL+L + +D+T K +++ +G
Sbjct: 121 QTQETPLWLLLQVAPIRNERDLVVLFLLTFRDITALKQPIDSEDTKG 167
>sp|Q920E3|KCNH5_MOUSE Potassium voltage-gated channel subfamily H member 5 OS=Mus
musculus GN=Kcnh5 PE=2 SV=3
Length = 988
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 10 RQRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 55
+ RTP W + I PI+NE +VVL+L + KD+T K D+ +G
Sbjct: 100 KNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQPIEDDSTKG 145
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 42 TNTKMAQMADNGEGDYEDM---QELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 98
T K+ Q DN E + ++ ++ TP W + I PI+NE +VVL+L + KD+T K
Sbjct: 77 TIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQ 136
Query: 99 AQMADNGEG 107
D+ +G
Sbjct: 137 PIEDDSTKG 145
>sp|Q9EPI9|KCNH5_RAT Potassium voltage-gated channel subfamily H member 5 OS=Rattus
norvegicus GN=Kcnh5 PE=2 SV=1
Length = 988
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 10 RQRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 55
+ RTP W + I PI+NE +VVL+L + KD+T K D+ +G
Sbjct: 100 KNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQPIEDDSTKG 145
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 42 TNTKMAQMADNGEGDYEDM---QELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 98
T K+ Q DN E + ++ ++ TP W + I PI+NE +VVL+L + KD+T K
Sbjct: 77 TIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQ 136
Query: 99 AQMADNGEG 107
D+ +G
Sbjct: 137 PIEDDSTKG 145
>sp|Q8NCM2|KCNH5_HUMAN Potassium voltage-gated channel subfamily H member 5 OS=Homo
sapiens GN=KCNH5 PE=1 SV=3
Length = 988
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 10 RQRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 55
+ RTP W + I PI+NE +VVL+L + KD+T K D+ +G
Sbjct: 100 KNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQPIEDDSTKG 145
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 42 TNTKMAQMADNGEGDYEDM---QELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 98
T K+ Q DN E + ++ ++ TP W + I PI+NE +VVL+L + KD+T K
Sbjct: 77 TIEKVRQTFDNYESNCFEVLLYKKNRTPVWFYMQIAPIRNEHEKVVLFLCTFKDITLFKQ 136
Query: 99 AQMADNGEG 107
D+ +G
Sbjct: 137 PIEDDSTKG 145
>sp|O18965|KCNH1_BOVIN Potassium voltage-gated channel subfamily H member 1 OS=Bos taurus
GN=KCNH1 PE=2 SV=2
Length = 987
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 10 RQRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 55
+ RTP W + I PI+NE+ +VVL+L + D+T K D+ +G
Sbjct: 102 KNRTPVWFFVKIAPIRNEQDKVVLFLCTFSDITAFKQPIEDDSCKG 147
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 65 TPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 107
TP W + I PI+NE+ +VVL+L + D+T K D+ +G
Sbjct: 105 TPVWFFVKIAPIRNEQDKVVLFLCTFSDITAFKQPIEDDSCKG 147
>sp|Q60603|KCNH1_MOUSE Potassium voltage-gated channel subfamily H member 1 OS=Mus
musculus GN=Kcnh1 PE=1 SV=1
Length = 989
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 10 RQRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 55
+ RTP W + I PI+NE+ +VVL+L + D+T K D+ +G
Sbjct: 102 KNRTPVWFFVKIAPIRNEQDKVVLFLCTFSDITAFKQPIEDDSCKG 147
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 65 TPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 107
TP W + I PI+NE+ +VVL+L + D+T K D+ +G
Sbjct: 105 TPVWFFVKIAPIRNEQDKVVLFLCTFSDITAFKQPIEDDSCKG 147
>sp|O95259|KCNH1_HUMAN Potassium voltage-gated channel subfamily H member 1 OS=Homo
sapiens GN=KCNH1 PE=1 SV=1
Length = 989
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 10 RQRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 55
+ RTP W + I PI+NE+ +VVL+L + D+T K D+ +G
Sbjct: 102 KNRTPVWFFVKIAPIRNEQDKVVLFLCTFSDITAFKQPIEDDSCKG 147
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 65 TPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 107
TP W + I PI+NE+ +VVL+L + D+T K D+ +G
Sbjct: 105 TPVWFFVKIAPIRNEQDKVVLFLCTFSDITAFKQPIEDDSCKG 147
>sp|Q63472|KCNH1_RAT Potassium voltage-gated channel subfamily H member 1 OS=Rattus
norvegicus GN=Kcnh1 PE=1 SV=1
Length = 962
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 10 RQRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 55
+ RTP W + I PI+NE+ +VVL+L + D+T K D+ +G
Sbjct: 102 KNRTPVWFFVKIAPIRNEQDKVVLFLCTFSDITAFKQPIEDDSCKG 147
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 65 TPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 107
TP W + I PI+NE+ +VVL+L + D+T K D+ +G
Sbjct: 105 TPVWFFVKIAPIRNEQDKVVLFLCTFSDITAFKQPIEDDSCKG 147
>sp|O08962|KCNH2_RAT Potassium voltage-gated channel subfamily H member 2 OS=Rattus
norvegicus GN=Kcnh2 PE=1 SV=1
Length = 1163
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 98
G+ F CL+D+VP+KNE V++++ + + V M
Sbjct: 103 GSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 15 FWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 46
F CL+D+VP+KNE V++++ + + V M
Sbjct: 106 FLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
>sp|Q8WNY2|KCNH2_RABIT Potassium voltage-gated channel subfamily H member 2 OS=Oryctolagus
cuniculus GN=KCNH2 PE=2 SV=3
Length = 1161
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 98
G+ F CL+D+VP+KNE V++++ + + V M
Sbjct: 103 GSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 15 FWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 46
F CL+D+VP+KNE V++++ + + V M
Sbjct: 106 FLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
>sp|O35219|KCNH2_MOUSE Potassium voltage-gated channel subfamily H member 2 OS=Mus
musculus GN=Kcnh2 PE=2 SV=2
Length = 1162
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 98
G+ F CL+D+VP+KNE V++++ + + V M
Sbjct: 103 GSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 15 FWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 46
F CL+D+VP+KNE V++++ + + V M
Sbjct: 106 FLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
>sp|Q12809|KCNH2_HUMAN Potassium voltage-gated channel subfamily H member 2 OS=Homo
sapiens GN=KCNH2 PE=1 SV=1
Length = 1159
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 98
G+ F CL+D+VP+KNE V++++ + + V M
Sbjct: 103 GSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 15 FWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 46
F CL+D+VP+KNE V++++ + + V M
Sbjct: 106 FLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
>sp|Q9TSZ3|KCNH2_CANFA Potassium voltage-gated channel subfamily H member 2 OS=Canis
familiaris GN=KCNH2 PE=2 SV=1
Length = 1158
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 98
G+ F CL+D+VP+KNE V++++ + + V M
Sbjct: 103 GSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 15 FWCLLDIVPIKNEKREVVLYLASHKDVTNTKM 46
F CL+D+VP+KNE V++++ + + V M
Sbjct: 106 FLCLVDVVPVKNEDGAVIMFILNFEVVMEKDM 137
>sp|O54853|KCNH6_RAT Potassium voltage-gated channel subfamily H member 6 OS=Rattus
norvegicus GN=Kcnh6 PE=1 SV=1
Length = 950
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 9 YRQ-RTPFWCLLDIVPIKNEKREVVLYLASHKDV 41
YR+ + F CL+D+VP+KNE V++++ + +D+
Sbjct: 99 YRKDASSFRCLVDVVPVKNEDGAVIMFILNFEDL 132
Score = 33.5 bits (75), Expect = 0.40, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDV 93
+ F CL+D+VP+KNE V++++ + +D+
Sbjct: 103 ASSFRCLVDVVPVKNEDGAVIMFILNFEDL 132
>sp|Q9H252|KCNH6_HUMAN Potassium voltage-gated channel subfamily H member 6 OS=Homo
sapiens GN=KCNH6 PE=1 SV=1
Length = 994
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 9 YRQ-RTPFWCLLDIVPIKNEKREVVLYLASHKDV 41
YR+ + F CL+D+VP+KNE V++++ + +D+
Sbjct: 99 YRKDASSFRCLVDVVPVKNEDGAVIMFILNFEDL 132
Score = 33.5 bits (75), Expect = 0.40, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDV 93
+ F CL+D+VP+KNE V++++ + +D+
Sbjct: 103 ASSFRCLVDVVPVKNEDGAVIMFILNFEDL 132
>sp|Q2QYY8|PHT1A_ORYSJ Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2
Length = 921
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 45 KMAQMADNGE---GDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVT 94
K+ Q NG G + ++ GTPFW LL I PIK+E ++ ++ +V+
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVS 240
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 8 NYRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVT 42
NY++ TPFW LL I PIK+E ++ ++ +V+
Sbjct: 205 NYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVS 240
>sp|Q2RBR1|PHT1B_ORYSJ Phototropin-1B OS=Oryza sativa subsp. japonica GN=PHOT1B PE=1 SV=2
Length = 921
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 45 KMAQMADNGE---GDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVT 94
K+ Q NG G + ++ GTPFW LL I PIK+E ++ ++ +V+
Sbjct: 188 KIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVS 240
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 8 NYRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVT 42
NY++ TPFW LL I PIK+E ++ ++ +V+
Sbjct: 205 NYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVS 240
>sp|A6X554|LOVHK_OCHA4 Blue-light-activated histidine kinase OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=Oant_3652
PE=3 SV=1
Length = 491
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 54 EGDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVT 94
E D + ++ G PFW L I P+K E E+ +++S DVT
Sbjct: 96 EIDILNYKKSGEPFWNRLHISPVKTENGELHHFVSSQLDVT 136
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 8 NYRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVT 42
NY++ PFW L I P+K E E+ +++S DVT
Sbjct: 101 NYKKSGEPFWNRLHISPVKTENGELHHFVSSQLDVT 136
>sp|B4NZ70|IRS1_DROYA Insulin receptor substrate 1 OS=Drosophila yakuba GN=chico PE=3
SV=1
Length = 949
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 25 KNEKREVVLYLASHKDVTN-TKMAQMADNGEGDYEDMQELGTPFWCLLDIVPIKNEKREV 83
+ + + L+ S KD+ N TK+ A+ E Y +M+ +G + + +PIK EK ++
Sbjct: 607 RTDSSSLTLHATSQKDIFNGTKLNNTANTSEDGYLEMKPVGNAYTPSSNCLPIKVEKLKL 666
Query: 84 VLYLA 88
Y A
Sbjct: 667 SDYTA 671
>sp|P93025|PHOT2_ARATH Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2
Length = 915
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 40 DVTNTKMAQMAD---NGE---GDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDV 93
D ++A++ D NG+ G + ++ GTPFW LL + PIK+++ + ++ +V
Sbjct: 177 DTDKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEV 236
Query: 94 T 94
+
Sbjct: 237 S 237
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 8 NYRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVT 42
NY++ TPFW LL + PIK+++ + ++ +V+
Sbjct: 202 NYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVS 237
>sp|B0BTI9|XYLA_ACTPJ Xylose isomerase OS=Actinobacillus pleuropneumoniae serotype 3
(strain JL03) GN=xylA PE=3 SV=1
Length = 439
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 57 YEDMQELGTPFWCL--LDIVPIKNEKREVVLYLASHKDVTNTKMAQMA 102
+E Q+LG P++C +DI P N +E V + D+ K A+
Sbjct: 87 FEFFQKLGIPYYCFHDVDIAPEGNSYKEYVHNFHTMVDILEKKQAETG 134
>sp|B3H2X9|XYLA_ACTP7 Xylose isomerase OS=Actinobacillus pleuropneumoniae serotype 7
(strain AP76) GN=xylA PE=3 SV=1
Length = 439
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 57 YEDMQELGTPFWCL--LDIVPIKNEKREVVLYLASHKDVTNTKMAQMA 102
+E Q+LG P++C +DI P N +E V + D+ K A+
Sbjct: 87 FEFFQKLGIPYYCFHDVDIAPEGNSYKEYVHNFHTMVDILEKKQAETG 134
>sp|A3N3K2|XYLA_ACTP2 Xylose isomerase OS=Actinobacillus pleuropneumoniae serotype 5b
(strain L20) GN=xylA PE=3 SV=1
Length = 439
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 57 YEDMQELGTPFWCL--LDIVPIKNEKREVVLYLASHKDVTNTKMAQMA 102
+E Q+LG P++C +DI P N +E V + D+ K A+
Sbjct: 87 FEFFQKLGIPYYCFHDVDIAPEGNSYKEYVHNFHTMVDILEKKQAETG 134
>sp|Q8P3H1|XYLA2_XANCP Xylose isomerase 2 OS=Xanthomonas campestris pv. campestris (strain
ATCC 33913 / NCPPB 528 / LMG 568) GN=xylA2 PE=3 SV=1
Length = 446
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 40 DVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDI 73
DV NT +A+ + +E +LG P++C DI
Sbjct: 78 DVGNTALARAEAKSDAAFEFFTKLGVPYYCFHDI 111
>sp|Q4UNZ4|XYLA2_XANC8 Xylose isomerase 2 OS=Xanthomonas campestris pv. campestris (strain
8004) GN=xylA2 PE=3 SV=1
Length = 446
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 40 DVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDI 73
DV NT +A+ + +E +LG P++C DI
Sbjct: 78 DVGNTALARAEAKSDAAFEFFTKLGVPYYCFHDI 111
>sp|Q8P9T9|XYLA1_XANCP Xylose isomerase 1 OS=Xanthomonas campestris pv. campestris (strain
ATCC 33913 / NCPPB 528 / LMG 568) GN=xylA1 PE=3 SV=1
Length = 446
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 40 DVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDI 73
DV NT +A+ + +E +LG P++C DI
Sbjct: 78 DVGNTALARAEAKSDAAFEFFTKLGVPYYCFHDI 111
>sp|Q4UTU6|XYLA1_XANC8 Xylose isomerase 1 OS=Xanthomonas campestris pv. campestris (strain
8004) GN=xylA1 PE=3 SV=1
Length = 446
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 40 DVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDI 73
DV NT +A+ + +E +LG P++C DI
Sbjct: 78 DVGNTALARAEAKSDAAFEFFTKLGVPYYCFHDI 111
>sp|Q2NXR2|XYLA_XANOM Xylose isomerase OS=Xanthomonas oryzae pv. oryzae (strain MAFF
311018) GN=xylA1 PE=3 SV=1
Length = 445
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 40 DVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMA 99
DV N+ +A+ + +E +LG P++C DI + + ++ Y ++ K +
Sbjct: 78 DVGNSALARAEAKSDAAFEFFTKLGVPYYCFHDI-DLSPDADDIGEYESNLKHMVGVAKQ 136
Query: 100 QMADNG 105
+ AD G
Sbjct: 137 RQADTG 142
>sp|Q5GUF2|XYLA2_XANOR Xylose isomerase 2 OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=xylA2 PE=3 SV=2
Length = 445
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 40 DVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMA 99
DV N+ +A+ + +E +LG P++C DI + + ++ Y ++ K +
Sbjct: 78 DVGNSALARAEAKSDAAFEFFTKLGVPYYCFHDI-DLSPDADDIGEYESNLKHMVGVAKQ 136
Query: 100 QMADNG 105
+ AD G
Sbjct: 137 RQADTG 142
>sp|Q5GYQ7|XYLA1_XANOR Xylose isomerase 1 OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=xylA1 PE=3 SV=1
Length = 445
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 40 DVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMA 99
DV N+ +A+ + +E +LG P++C DI + + ++ Y ++ K +
Sbjct: 78 DVGNSALARAEAKSDAAFEFFTKLGVPYYCFHDI-DLSPDADDIGEYESNLKHMVGVAKQ 136
Query: 100 QMADNG 105
+ AD G
Sbjct: 137 RQADTG 142
>sp|C6DKT6|PLSX_PECCP Phosphate acyltransferase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=plsX PE=3 SV=1
Length = 348
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 18 LLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDI 73
L+ ++P + + VVL L ++ D +T + Q A G E++ EL P LL+I
Sbjct: 130 LVSVLPHQQHGKTVVLDLGANVDCDSTMLVQFAVMGSVMAEEVLELKNPRVALLNI 185
>sp|Q9ST27|PHOT2_ORYSJ Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1
Length = 907
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 8 NYRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVT 42
NYR+ PFW LL + PI+++ +V+ ++ +V+
Sbjct: 171 NYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQVEVS 206
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVT 94
G PFW LL + PI+++ +V+ ++ +V+
Sbjct: 176 GAPFWNLLTVTPIRDDNGKVIKFIGMQVEVS 206
>sp|O48963|PHOT1_ARATH Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1
Length = 996
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVT 94
GT FW LL I PIK+E +V+ ++ +V+
Sbjct: 271 GTSFWNLLTIAPIKDESGKVLKFIGMQVEVS 301
Score = 28.9 bits (63), Expect = 8.4, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 8 NYRQR-TPFWCLLDIVPIKNEKREVVLYLASHKDVT 42
NY++ T FW LL I PIK+E +V+ ++ +V+
Sbjct: 266 NYKKDGTSFWNLLTIAPIKDESGKVLKFIGMQVEVS 301
>sp|B3N946|IRS1_DROER Insulin receptor substrate 1 OS=Drosophila erecta GN=chico PE=3
SV=1
Length = 948
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 25 KNEKREVVLYLASHKDVTN-TKMAQMADNGEGDYEDMQELGTPFWCLLDIVPIKNEKREV 83
+ + + L+ S KD+ N TK+ + E Y +M+ +G + + +PIK EK ++
Sbjct: 607 RTDSSSLTLHATSQKDIFNGTKLNNTVNASEEGYLEMKPVGNAYTPSSNCLPIKVEKLKI 666
Query: 84 VLYLA 88
Y A
Sbjct: 667 SDYTA 671
>sp|Q83051|P26_LIYV9 Protein p26 OS=Lettuce infectious yellows virus (isolate United
States/92) PE=1 SV=1
Length = 227
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 59 DMQELGTPFWCLLDIVPIKNEK 80
D QEL FWCL+D + K+ K
Sbjct: 21 DHQELSDTFWCLMDFISSKHGK 42
>sp|Q8PLL9|XYLA1_XANAC Xylose isomerase 1 OS=Xanthomonas axonopodis pv. citri (strain 306)
GN=xylA1 PE=3 SV=1
Length = 441
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 40 DVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMA 99
DV +T + + + +E +LG P++C DI + + ++ Y ++ K +
Sbjct: 74 DVGDTALNRAEAKADAAFEFFTKLGVPYYCFHDI-DLSPDADDITEYESNLKHMVGVARQ 132
Query: 100 QMADNG 105
+ AD G
Sbjct: 133 RQADTG 138
>sp|Q9HPU8|BAT_HALSA Bacterioopsin transcriptional activator OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=bat PE=1
SV=1
Length = 674
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGE 106
G+ FW +DI PI +E V Y+ DV+ AQ GE
Sbjct: 243 GSLFWNQVDISPIYDEDGTVSHYVGFQMDVSERMAAQQELQGE 285
>sp|Q8PEW5|XYLA2_XANAC Xylose isomerase 2 OS=Xanthomonas axonopodis pv. citri (strain 306)
GN=xylA2 PE=3 SV=2
Length = 445
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 40 DVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMA 99
DV +T + + + +E +LG P++C DI + + ++ Y ++ K +
Sbjct: 78 DVGDTALNRAEAKADAAFEFFTKLGVPYYCFHDI-DLSPDADDITEYESNLKHMVGVAKQ 136
Query: 100 QMADNG 105
+ AD G
Sbjct: 137 RQADTG 142
>sp|C4KZN9|RL16_EXISA 50S ribosomal protein L16 OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=rplP PE=3 SV=1
Length = 145
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 30 EVVLYLASHKDVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLAS 89
+V + + HK T + +G+G E + P + +I + E L LAS
Sbjct: 63 KVWIKIFPHKPYTKKPLEVRMGSGKGAPEGWVAVVKPGKVMFEIAGVSEEVAREALRLAS 122
Query: 90 HKDVTNTKMAQMADNG 105
HK K + +NG
Sbjct: 123 HKLPVKCKFVKREENG 138
>sp|B1YGV7|RL16_EXIS2 50S ribosomal protein L16 OS=Exiguobacterium sibiricum (strain DSM
17290 / JCM 13490 / 255-15) GN=rplP PE=3 SV=1
Length = 145
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 30 EVVLYLASHKDVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDIVPIKNEKREVVLYLAS 89
+V + + HK T + +G+G E + P + +I + E L LAS
Sbjct: 63 KVWIKIFPHKPYTKKPLEVRMGSGKGAPEGWVAVVKPGKVMFEIAGVSEEIAREALRLAS 122
Query: 90 HKDVTNTKMAQMADNG 105
HK K + +NG
Sbjct: 123 HKLPVKCKFVKREENG 138
>sp|Q3Z327|PLSX_SHISS Phosphate acyltransferase OS=Shigella sonnei (strain Ss046) GN=plsX
PE=3 SV=2
Length = 356
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 18 LLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDI 73
L+ ++P + + + VVL L ++ D +T + Q A G E++ E+ P LL+I
Sbjct: 130 LVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNI 185
>sp|Q83RS9|PLSX_SHIFL Phosphate acyltransferase OS=Shigella flexneri GN=plsX PE=3 SV=2
Length = 356
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 18 LLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGDYEDMQELGTPFWCLLDI 73
L+ ++P + + + VVL L ++ D +T + Q A G E++ E+ P LL+I
Sbjct: 130 LVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNI 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,064,128
Number of Sequences: 539616
Number of extensions: 1778363
Number of successful extensions: 3886
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3760
Number of HSP's gapped (non-prelim): 142
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)