Query psy8547
Match_columns 115
No_of_seqs 159 out of 620
Neff 6.6
Searched_HMMs 13730
Date Fri Aug 16 21:40:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8547.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8547hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bywa_ d.110.3.6 (A:) Erg pot 99.2 2.7E-11 2E-15 77.4 6.0 42 3-44 68-110 (110)
2 d1n9la_ d.110.3.6 (A:) Putativ 99.1 1.4E-10 9.9E-15 74.3 6.2 39 5-43 70-109 (109)
3 d1bywa_ d.110.3.6 (A:) Erg pot 99.1 1.4E-10 1E-14 74.0 6.0 39 58-96 72-110 (110)
4 d1n9la_ d.110.3.6 (A:) Putativ 99.0 4E-10 2.9E-14 72.0 6.3 69 27-95 14-109 (109)
5 d1jnua_ d.110.3.6 (A:) Photore 98.7 6.7E-09 4.9E-13 65.1 4.8 37 5-41 67-104 (104)
6 d1jnua_ d.110.3.6 (A:) Photore 98.6 1.8E-08 1.3E-12 63.1 5.0 67 27-93 11-104 (104)
7 d1p97a_ d.110.3.7 (A:) Hypoxia 98.6 4.1E-08 3E-12 62.2 5.8 42 57-98 71-113 (114)
8 d1p97a_ d.110.3.7 (A:) Hypoxia 98.4 1.5E-07 1.1E-11 59.4 5.6 36 11-46 77-113 (114)
9 d1xj3a1 d.110.3.2 (A:154-259) 98.2 9.5E-07 6.9E-11 53.8 4.2 38 5-44 68-106 (106)
10 d1xj3a1 d.110.3.2 (A:154-259) 98.1 1.2E-06 8.8E-11 53.4 4.0 71 24-96 5-106 (106)
11 d1ew0a_ d.110.3.2 (A:) Histidi 97.7 2.4E-05 1.8E-09 49.5 4.4 35 58-94 96-130 (130)
12 d1ew0a_ d.110.3.2 (A:) Histidi 97.7 2.8E-05 2E-09 49.2 4.7 35 6-42 95-130 (130)
13 d1v9ya_ d.110.3.2 (A:) Direct 97.6 3.1E-05 2.3E-09 47.3 4.1 68 23-92 15-113 (113)
14 d1v9ya_ d.110.3.2 (A:) Direct 97.5 5.3E-05 3.9E-09 46.2 4.2 32 7-40 81-113 (113)
15 d1ll8a_ d.110.3.5 (A:) N-termi 96.4 0.0013 9.6E-08 40.7 3.6 34 59-94 80-113 (114)
16 d1ll8a_ d.110.3.5 (A:) N-termi 96.2 0.0023 1.7E-07 39.5 3.8 34 7-42 79-113 (114)
17 d1oj5a_ d.110.3.8 (A:) PAS dom 94.4 0.018 1.3E-06 35.7 3.6 35 56-90 69-104 (109)
18 d1oj5a_ d.110.3.8 (A:) PAS dom 92.2 0.076 5.5E-06 32.7 3.9 26 11-36 76-101 (109)
19 d1p0za_ d.110.6.1 (A:) Sensor 82.5 1.4 0.0001 27.4 5.4 27 17-43 101-127 (131)
20 d3by8a1 d.110.6.1 (A:46-178) F 80.4 1.2 9E-05 28.0 4.5 34 11-44 94-127 (133)
21 d1nwza_ d.110.3.1 (A:) Photoac 79.3 1.1 7.7E-05 27.4 3.8 57 24-80 32-116 (125)
22 d1p0za_ d.110.6.1 (A:) Sensor 63.7 6.6 0.00048 24.0 5.0 28 69-96 101-128 (131)
23 d3by8a1 d.110.6.1 (A:46-178) F 60.0 5.5 0.0004 24.8 4.0 33 64-96 95-127 (133)
24 d3er7a1 d.17.4.24 (A:5-122) Un 59.6 13 0.00094 23.1 5.7 34 58-91 83-116 (118)
25 d1mzua_ d.110.3.1 (A:) PYP dom 59.1 6.1 0.00045 23.2 4.0 20 60-79 82-101 (110)
26 d1pvma3 g.41.13.1 (A:143-178) 54.4 5.8 0.00042 19.4 2.6 15 21-35 12-26 (36)
27 d3bida1 d.348.1.1 (A:1-56) Unc 44.4 8.9 0.00065 20.8 2.7 43 61-109 8-50 (56)
28 d1dd9a_ e.13.1.1 (A:) DNA prim 37.4 11 0.00084 26.7 3.1 21 18-38 88-108 (314)
29 d2k7ia1 d.348.1.1 (A:1-62) Unc 36.6 3.9 0.00029 22.8 0.3 45 61-111 9-53 (62)
30 d3ddja2 d.37.1.1 (A:1-135) Unc 35.7 9.9 0.00072 22.6 2.2 18 19-36 105-122 (135)
31 d1vr9a3 d.37.1.1 (A:1-121) Hyp 32.4 17 0.0012 21.4 2.8 18 19-36 91-108 (121)
32 d2ouxa2 d.37.1.1 (A:136-262) M 31.8 17 0.0012 21.7 2.8 23 19-42 96-118 (127)
33 d2k49a1 d.348.1.1 (A:59-110) U 31.5 11 0.00077 20.3 1.5 20 61-86 3-22 (52)
34 d2riha1 d.37.1.1 (A:2-132) Unc 31.5 13 0.00093 22.0 2.2 24 19-43 97-120 (131)
35 d2yzqa1 d.37.1.1 (A:123-278) U 31.5 14 0.001 22.4 2.4 23 19-42 35-57 (156)
36 d2k8ea2 d.348.1.1 (A:75-126) U 30.9 11 0.00077 20.3 1.5 20 61-86 3-22 (52)
37 d2yvxa2 d.37.1.1 (A:132-275) M 30.6 17 0.0013 22.1 2.8 24 19-43 96-119 (144)
38 d1yava3 d.37.1.1 (A:13-144) Hy 30.4 17 0.0012 21.6 2.6 24 19-43 35-58 (132)
39 d1f5ma_ d.110.2.1 (A:) Hypothe 29.0 39 0.0029 21.2 4.5 24 17-40 127-150 (176)
40 d2fp7b1 b.47.1.3 (B:19-170) NS 28.7 14 0.001 24.1 2.0 17 21-37 118-134 (152)
41 d1mkma2 d.110.2.2 (A:76-246) T 28.2 25 0.0018 21.8 3.3 22 18-39 120-141 (171)
42 d2k49a2 d.348.1.1 (A:1-58) Unc 27.4 14 0.001 20.1 1.6 41 61-107 10-50 (58)
43 d2fomb1 b.47.1.3 (B:18-167) NS 27.4 15 0.0011 23.8 2.0 17 20-36 118-134 (150)
44 d1zfja4 d.37.1.1 (A:95-220) Ty 26.5 15 0.0011 21.7 1.9 24 20-44 92-115 (126)
45 d2yzqa2 d.37.1.1 (A:1-122) Unc 26.1 25 0.0018 20.6 2.9 22 20-42 92-113 (122)
46 d2nyca1 d.37.1.1 (A:181-320) N 26.0 18 0.0013 21.6 2.2 23 19-42 40-62 (140)
47 d1tf1a_ d.110.2.2 (A:) Transcr 25.5 30 0.0022 21.7 3.3 23 17-39 130-152 (184)
48 d1qzga_ b.40.4.3 (A:) Protecti 25.0 11 0.0008 25.0 1.0 40 8-47 15-54 (170)
49 d1o50a3 d.37.1.1 (A:1-145) Hyp 24.1 21 0.0015 21.2 2.2 18 19-36 114-131 (145)
50 d2ef7a1 d.37.1.1 (A:1-127) Unc 24.0 21 0.0015 21.0 2.2 18 19-36 98-115 (127)
51 d2o16a3 d.37.1.1 (A:20-158) Hy 23.2 22 0.0016 21.3 2.2 18 19-36 33-50 (139)
52 d2o9aa1 d.110.2.2 (A:1-180) Tr 22.7 40 0.0029 20.9 3.5 23 17-39 126-148 (180)
53 d3ddja1 d.37.1.1 (A:136-276) U 22.0 37 0.0027 19.9 3.1 22 20-42 105-126 (141)
54 d1pvma4 d.37.1.1 (A:1-142) Hyp 21.5 38 0.0028 20.2 3.1 23 20-43 101-123 (142)
55 d1y5ha3 d.37.1.1 (A:2-124) Hyp 21.4 16 0.0012 21.4 1.2 21 20-41 33-53 (123)
56 d2qf3a1 b.47.1.1 (A:43-252) St 21.3 26 0.0019 22.5 2.4 17 21-37 160-176 (210)
57 d1qtfa_ b.47.1.1 (A:) Exfoliat 21.2 28 0.002 23.0 2.6 16 21-36 187-202 (246)
58 d2p7ja2 d.110.6.2 (A:9-180) GG 20.3 59 0.0043 19.8 4.0 26 17-43 142-167 (172)
No 1
>d1bywa_ d.110.3.6 (A:) Erg potassium channel, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=2.7e-11 Score=77.41 Aligned_cols=42 Identities=31% Similarity=0.608 Sum_probs=38.4
Q ss_pred ccceeecc-CCCceeEEEEEEEeeCCCCCEEEEEEEEEeccch
Q psy8547 3 THPDTNYR-QRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNT 44 (115)
Q Consensus 3 ~~~~~~Yr-dG~~fw~~~~i~Pi~de~G~~~~fi~~~~DIT~~ 44 (115)
..+..++| +|+.||+.++++||+|++|++++|+++++|||+|
T Consensus 68 ~~e~~~~~~~g~~~w~~~~~~pi~d~~G~v~~~i~~~~DITer 110 (110)
T d1bywa_ 68 KVEIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred cceeeeeecccceeeeeeeEEEEECCCCCEEEEEEEEEECCCC
Confidence 34566778 9999999999999999999999999999999986
No 2
>d1n9la_ d.110.3.6 (A:) Putative blue light receptor, phot-lov1 domain {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.06 E-value=1.4e-10 Score=74.32 Aligned_cols=39 Identities=41% Similarity=0.710 Sum_probs=36.1
Q ss_pred ceeecc-CCCceeEEEEEEEeeCCCCCEEEEEEEEEeccc
Q psy8547 5 PDTNYR-QRTPFWCLLDIVPIKNEKREVVLYLASHKDVTN 43 (115)
Q Consensus 5 ~~~~Yr-dG~~fw~~~~i~Pi~de~G~~~~fi~~~~DIT~ 43 (115)
+..++| ||+.||+.++++||+|++|++.+|+++++|||+
T Consensus 70 e~~~~~kdG~~~w~~~~~~pi~d~~G~v~~~v~~~~DITa 109 (109)
T d1n9la_ 70 RLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred eEEEEecCCeEEEEEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 456677 999999999999999999999999999999995
No 3
>d1bywa_ d.110.3.6 (A:) Erg potassium channel, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05 E-value=1.4e-10 Score=74.03 Aligned_cols=39 Identities=31% Similarity=0.629 Sum_probs=37.1
Q ss_pred eceecCCceeEEEEEeEEeeCCCCCEEEEEEEeeecccc
Q psy8547 58 EDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNT 96 (115)
Q Consensus 58 ~~yrKdGs~f~~~~~i~pirde~G~v~~~i~~~~DIT~~ 96 (115)
..++|+|+.||+.++++||+|++|++++|++++.|||+|
T Consensus 72 ~~~~~~g~~~w~~~~~~pi~d~~G~v~~~i~~~~DITer 110 (110)
T d1bywa_ 72 AFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEECTTSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred eeeecccceeeeeeeEEEEECCCCCEEEEEEEEEECCCC
Confidence 457999999999999999999999999999999999986
No 4
>d1n9la_ d.110.3.6 (A:) Putative blue light receptor, phot-lov1 domain {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.99 E-value=4e-10 Score=72.04 Aligned_cols=69 Identities=26% Similarity=0.397 Sum_probs=51.7
Q ss_pred CCCCEEEEEEEEEeccchhhhhhhc------------------------CCC---CceeceecCCceeEEEEEeEEeeCC
Q psy8547 27 EKREVVLYLASHKDVTNTKMAQMAD------------------------NGE---GDYEDMQELGTPFWCLLDIVPIKNE 79 (115)
Q Consensus 27 e~G~~~~fi~~~~DIT~~k~~e~~~------------------------~~~---e~~~~yrKdGs~f~~~~~i~pirde 79 (115)
++|.++++-..+..++--...|-.- ++. ..+..+||||+.||+.++++||+|+
T Consensus 14 pdg~Ii~vN~a~~~~~Gy~~~El~G~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~e~~~~~kdG~~~w~~~~~~pi~d~ 93 (109)
T d1n9la_ 14 PDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPFWNLLTVTPIKTP 93 (109)
T ss_dssp TTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECT
T ss_pred CCCeEEEEcHHHHHHHCcCHHHHcCCcceeeecccCCHHHhhhhhhHhhcCCceeeeEEEEecCCeEEEEEEEEEEEECC
Confidence 4688887666666666554433210 111 1234579999999999999999999
Q ss_pred CCCEEEEEEEeeeccc
Q psy8547 80 KREVVLYLASHKDVTN 95 (115)
Q Consensus 80 ~G~v~~~i~~~~DIT~ 95 (115)
+|++.+|+++++|||.
T Consensus 94 ~G~v~~~v~~~~DITa 109 (109)
T d1n9la_ 94 DGRVSKFVGVQVDVTS 109 (109)
T ss_dssp TSCEEEEEEEEEECCC
T ss_pred CCCEEEEEEEEEECCC
Confidence 9999999999999994
No 5
>d1jnua_ d.110.3.6 (A:) Photoreceptor phy3 flavin-binding domain, lov2 {Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]}
Probab=98.72 E-value=6.7e-09 Score=65.12 Aligned_cols=37 Identities=19% Similarity=0.543 Sum_probs=34.0
Q ss_pred ceeecc-CCCceeEEEEEEEeeCCCCCEEEEEEEEEec
Q psy8547 5 PDTNYR-QRTPFWCLLDIVPIKNEKREVVLYLASHKDV 41 (115)
Q Consensus 5 ~~~~Yr-dG~~fw~~~~i~Pi~de~G~~~~fi~~~~DI 41 (115)
+..+++ ||+.||++++++||+|++|++++|+++.+||
T Consensus 67 e~~~~~~dg~~~~~~~~~~pi~d~~G~v~~~i~i~~DI 104 (104)
T d1jnua_ 67 QVLNYTKGGRAFWNLFHLQVMRDENGDVQYFIGVQQEM 104 (104)
T ss_dssp EEEEECTTSCEEEEEEEEEEECTTTSSCCEEEEEEEEC
T ss_pred EEEEEecccceEEEEEEEEEEECCCCCEEEEEEEEEcC
Confidence 445666 9999999999999999999999999999997
No 6
>d1jnua_ d.110.3.6 (A:) Photoreceptor phy3 flavin-binding domain, lov2 {Maidenhair fern (Adiantum capillus-veneris) [TaxId: 13818]}
Probab=98.63 E-value=1.8e-08 Score=63.12 Aligned_cols=67 Identities=10% Similarity=0.311 Sum_probs=50.5
Q ss_pred CCCCEEEEEEEEEeccchhhhhhhc------------------------CCC---CceeceecCCceeEEEEEeEEeeCC
Q psy8547 27 EKREVVLYLASHKDVTNTKMAQMAD------------------------NGE---GDYEDMQELGTPFWCLLDIVPIKNE 79 (115)
Q Consensus 27 e~G~~~~fi~~~~DIT~~k~~e~~~------------------------~~~---e~~~~yrKdGs~f~~~~~i~pirde 79 (115)
++|.++++--.+..+|.....|-.- .++ .....++|||+.||+.++++|++|+
T Consensus 11 pd~~I~y~N~a~~~~~G~s~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dg~~~~~~~~~~pi~d~ 90 (104)
T d1jnua_ 11 PDNPIIFASDRFLELTEYTREEVLGNNCRFLQGRGTDRKAVQLIRDAVKEQRDVTVQVLNYTKGGRAFWNLFHLQVMRDE 90 (104)
T ss_dssp TTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEECTT
T ss_pred CCCEEEEEcHHHHHHHCcCHHHHCCccceeccccccchHHHhhhhhhhhcCceeEeEEEEEecccceEEEEEEEEEEECC
Confidence 4677877666666676665544321 011 1234589999999999999999999
Q ss_pred CCCEEEEEEEeeec
Q psy8547 80 KREVVLYLASHKDV 93 (115)
Q Consensus 80 ~G~v~~~i~~~~DI 93 (115)
+|++++|+++.+||
T Consensus 91 ~G~v~~~i~i~~DI 104 (104)
T d1jnua_ 91 NGDVQYFIGVQQEM 104 (104)
T ss_dssp TSSCCEEEEEEEEC
T ss_pred CCCEEEEEEEEEcC
Confidence 99999999999997
No 7
>d1p97a_ d.110.3.7 (A:) Hypoxia-inducible factor Hif2a, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.59 E-value=4.1e-08 Score=62.19 Aligned_cols=42 Identities=12% Similarity=0.119 Sum_probs=38.7
Q ss_pred eeceecCCceeEEEEEeEEeeCC-CCCEEEEEEEeeecccchh
Q psy8547 57 YEDMQELGTPFWCLLDIVPIKNE-KREVVLYLASHKDVTNTKM 98 (115)
Q Consensus 57 ~~~yrKdGs~f~~~~~i~pirde-~G~v~~~i~~~~DIT~~k~ 98 (115)
++.++|||+.+|+.++.+|++|+ +|++.+++++.+|||++|+
T Consensus 71 ~~~~~kdG~~~wv~~~~~~~~~~~~~~~~~ii~~~~dite~k~ 113 (114)
T d1p97a_ 71 YRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 113 (114)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTTCSEEEEEEEEEEEEEEEC
T ss_pred eeeeeecCcceEEEEEEEEEEeCCCCCEEEEEEEEEECChhhc
Confidence 45579999999999999999997 6899999999999999986
No 8
>d1p97a_ d.110.3.7 (A:) Hypoxia-inducible factor Hif2a, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.44 E-value=1.5e-07 Score=59.42 Aligned_cols=36 Identities=8% Similarity=0.014 Sum_probs=34.3
Q ss_pred CCCceeEEEEEEEeeCC-CCCEEEEEEEEEeccchhh
Q psy8547 11 QRTPFWCLLDIVPIKNE-KREVVLYLASHKDVTNTKM 46 (115)
Q Consensus 11 dG~~fw~~~~i~Pi~de-~G~~~~fi~~~~DIT~~k~ 46 (115)
||+.+|+.+..+|++|+ +|++.+++++.+|||++|+
T Consensus 77 dG~~~wv~~~~~~~~~~~~~~~~~ii~~~~dite~k~ 113 (114)
T d1p97a_ 77 HGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 113 (114)
T ss_dssp TSCEEEEEEEEEEEECTTTCSEEEEEEEEEEEEEEEC
T ss_pred cCcceEEEEEEEEEEeCCCCCEEEEEEEEEECChhhc
Confidence 99999999999999997 6899999999999999986
No 9
>d1xj3a1 d.110.3.2 (A:154-259) Histidine kinase FixL heme domain {Bradyrhizobium japonicum [TaxId: 375]}
Probab=98.15 E-value=9.5e-07 Score=53.83 Aligned_cols=38 Identities=21% Similarity=0.187 Sum_probs=31.5
Q ss_pred ceeecc-CCCceeEEEEEEEeeCCCCCEEEEEEEEEeccch
Q psy8547 5 PDTNYR-QRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNT 44 (115)
Q Consensus 5 ~~~~Yr-dG~~fw~~~~i~Pi~de~G~~~~fi~~~~DIT~~ 44 (115)
....++ ||+.||++++++|+++++|. +|+++.+|||+.
T Consensus 68 e~~~~~~dg~~~~v~~~~~~~~~~~~~--~~~~~~~DITE~ 106 (106)
T d1xj3a1 68 IVTGKRRDGTTFPMHLSIGEMQSGGEP--YFTGFVRDLTEH 106 (106)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEETTEE--EEEEEEEECHHH
T ss_pred eeeeeeccceEEEEEEEEEEEEECCeE--EEEEEEEeCCCC
Confidence 345556 99999999999999996654 588999999973
No 10
>d1xj3a1 d.110.3.2 (A:154-259) Histidine kinase FixL heme domain {Bradyrhizobium japonicum [TaxId: 375]}
Probab=98.11 E-value=1.2e-06 Score=53.36 Aligned_cols=71 Identities=11% Similarity=0.098 Sum_probs=49.5
Q ss_pred eeCCCCCEEEEEEEEEeccchhhhhhhc--------------------------CC-----CCceeceecCCceeEEEEE
Q psy8547 24 IKNEKREVVLYLASHKDVTNTKMAQMAD--------------------------NG-----EGDYEDMQELGTPFWCLLD 72 (115)
Q Consensus 24 i~de~G~~~~fi~~~~DIT~~k~~e~~~--------------------------~~-----~e~~~~yrKdGs~f~~~~~ 72 (115)
+.|++|+++++-..+..++.-...|-.- .+ ......++|||+.||+.++
T Consensus 5 ~~D~~G~I~~~N~a~~~l~Gy~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dg~~~~v~~~ 84 (106)
T d1xj3a1 5 VIDGHGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRRDGTTFPMHLS 84 (106)
T ss_dssp EEETTSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECTTSCEEEEEEE
T ss_pred EECCCCcEEEEcHHHHHHhhhchHhhcCCCcccccccccccchhhhhhhhhhhcccccccccceeeeeeccceEEEEEEE
Confidence 5688888887666666666554433210 00 0113447999999999999
Q ss_pred eEEeeCCCCCEEEEEEEeeecccc
Q psy8547 73 IVPIKNEKREVVLYLASHKDVTNT 96 (115)
Q Consensus 73 i~pirde~G~v~~~i~~~~DIT~~ 96 (115)
++|++++++ ..++++++|||+.
T Consensus 85 ~~~~~~~~~--~~~~~~~~DITE~ 106 (106)
T d1xj3a1 85 IGEMQSGGE--PYFTGFVRDLTEH 106 (106)
T ss_dssp EEEEEETTE--EEEEEEEEECHHH
T ss_pred EEEEEECCe--EEEEEEEEeCCCC
Confidence 999998665 4589999999973
No 11
>d1ew0a_ d.110.3.2 (A:) Histidine kinase FixL heme domain {Rhizobium meliloti [TaxId: 382]}
Probab=97.66 E-value=2.4e-05 Score=49.47 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=30.1
Q ss_pred eceecCCceeEEEEEeEEeeCCCCCEEEEEEEeeecc
Q psy8547 58 EDMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVT 94 (115)
Q Consensus 58 ~~yrKdGs~f~~~~~i~pirde~G~v~~~i~~~~DIT 94 (115)
..++|||+.||+.++++|++++++. .++++.+|||
T Consensus 96 ~~~~~dG~~~~v~~~~~~i~~~~~~--~~~~i~rDIT 130 (130)
T d1ew0a_ 96 SGQRKDGSTFPMKLAVGEMRSGGER--FFTGFIRDLT 130 (130)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEE--EEEEEEEECC
T ss_pred EEEcCCCCEEEEEEEEEEEEECCeE--EEEEEEEECC
Confidence 3478999999999999999986653 4889999998
No 12
>d1ew0a_ d.110.3.2 (A:) Histidine kinase FixL heme domain {Rhizobium meliloti [TaxId: 382]}
Probab=97.66 E-value=2.8e-05 Score=49.16 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=29.2
Q ss_pred eeecc-CCCceeEEEEEEEeeCCCCCEEEEEEEEEecc
Q psy8547 6 DTNYR-QRTPFWCLLDIVPIKNEKREVVLYLASHKDVT 42 (115)
Q Consensus 6 ~~~Yr-dG~~fw~~~~i~Pi~de~G~~~~fi~~~~DIT 42 (115)
...++ ||+.||++++++|++++++ .+|+++.+|||
T Consensus 95 ~~~~~~dG~~~~v~~~~~~i~~~~~--~~~~~i~rDIT 130 (130)
T d1ew0a_ 95 VSGQRKDGSTFPMKLAVGEMRSGGE--RFFTGFIRDLT 130 (130)
T ss_dssp EEEECTTSCEEEEEEEEEEEEETTE--EEEEEEEEECC
T ss_pred EEEEcCCCCEEEEEEEEEEEEECCe--EEEEEEEEECC
Confidence 34455 9999999999999998655 34889999998
No 13
>d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]}
Probab=97.59 E-value=3.1e-05 Score=47.33 Aligned_cols=68 Identities=19% Similarity=0.360 Sum_probs=46.2
Q ss_pred EeeCCCCCEEEEEEEEEeccchhhhhhhc-----------------------C-C-------CCceeceecCCceeEEEE
Q psy8547 23 PIKNEKREVVLYLASHKDVTNTKMAQMAD-----------------------N-G-------EGDYEDMQELGTPFWCLL 71 (115)
Q Consensus 23 Pi~de~G~~~~fi~~~~DIT~~k~~e~~~-----------------------~-~-------~e~~~~yrKdGs~f~~~~ 71 (115)
-+.|++|.++++=..+..++-....|..- . . ......++|||+.||+++
T Consensus 15 ~~~d~~g~i~~~N~~~~~l~Gy~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~v~~ 94 (113)
T d1v9ya_ 15 VLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRF 94 (113)
T ss_dssp EEECTTSBEEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHHHHHHHHHC----------CEEEEECTTSCEEEEEE
T ss_pred EEEeCCCCEEEEchhHhhhhccchhhhcCcceecccccccccccccccccccccccccccccceeeeeccccceeEEEEE
Confidence 35688899887766666666554433210 0 0 011234789999999999
Q ss_pred EeEEeeCCCCCEEEEEEEeee
Q psy8547 72 DIVPIKNEKREVVLYLASHKD 92 (115)
Q Consensus 72 ~i~pirde~G~v~~~i~~~~D 92 (115)
+++|++++.|. .|+++++|
T Consensus 95 ~~~~i~~~~~~--~~~~v~rD 113 (113)
T d1v9ya_ 95 ALSKVSAEGKV--YYLALVRD 113 (113)
T ss_dssp EEEEEEETTEE--EEEEEEEC
T ss_pred EEEEEEECCeE--EEEEEEEC
Confidence 99999987664 47888877
No 14
>d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]}
Probab=97.50 E-value=5.3e-05 Score=46.22 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=26.2
Q ss_pred eecc-CCCceeEEEEEEEeeCCCCCEEEEEEEEEe
Q psy8547 7 TNYR-QRTPFWCLLDIVPIKNEKREVVLYLASHKD 40 (115)
Q Consensus 7 ~~Yr-dG~~fw~~~~i~Pi~de~G~~~~fi~~~~D 40 (115)
...+ ||+.+|++++++|++++.|. +|+++.+|
T Consensus 81 ~~~~~dG~~~~v~~~~~~i~~~~~~--~~~~v~rD 113 (113)
T d1v9ya_ 81 QLEKKDGSKIWTRFALSKVSAEGKV--YYLALVRD 113 (113)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEE--EEEEEEEC
T ss_pred eeccccceeEEEEEEEEEEEECCeE--EEEEEEEC
Confidence 3345 99999999999999997663 48888887
No 15
>d1ll8a_ d.110.3.5 (A:) N-terminal PAS domain of Pas kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.41 E-value=0.0013 Score=40.70 Aligned_cols=34 Identities=12% Similarity=0.085 Sum_probs=29.1
Q ss_pred ceecCCceeEEEEEeEEeeCCCCCEEEEEEEeeecc
Q psy8547 59 DMQELGTPFWCLLDIVPIKNEKREVVLYLASHKDVT 94 (115)
Q Consensus 59 ~yrKdGs~f~~~~~i~pirde~G~v~~~i~~~~DIT 94 (115)
..+|+|+.||++++++++..+.+. .++++..||+
T Consensus 80 ~~~~~G~~~pvevs~~~i~~~~~~--~~l~vi~dV~ 113 (114)
T d1ll8a_ 80 IISRSGEKIPVSVWMKRMRQERRL--CCVVVLEPVE 113 (114)
T ss_dssp ECCTTCCCEEEECCEECCBSSSSB--EEEEEEEECC
T ss_pred EEccCCcEEEEEEEEEEEEECCeE--EEEEEEEECc
Confidence 478999999999999999976653 4789999994
No 16
>d1ll8a_ d.110.3.5 (A:) N-terminal PAS domain of Pas kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.19 E-value=0.0023 Score=39.53 Aligned_cols=34 Identities=9% Similarity=0.004 Sum_probs=27.8
Q ss_pred eecc-CCCceeEEEEEEEeeCCCCCEEEEEEEEEecc
Q psy8547 7 TNYR-QRTPFWCLLDIVPIKNEKREVVLYLASHKDVT 42 (115)
Q Consensus 7 ~~Yr-dG~~fw~~~~i~Pi~de~G~~~~fi~~~~DIT 42 (115)
...+ ||+.||++++++++..+.+. .++++.+||+
T Consensus 79 ~~~~~~G~~~pvevs~~~i~~~~~~--~~l~vi~dV~ 113 (114)
T d1ll8a_ 79 DIISRSGEKIPVSVWMKRMRQERRL--CCVVVLEPVE 113 (114)
T ss_dssp EECCTTCCCEEEECCEECCBSSSSB--EEEEEEEECC
T ss_pred EEEccCCcEEEEEEEEEEEEECCeE--EEEEEEEECc
Confidence 3345 99999999999999986553 3789999994
No 17
>d1oj5a_ d.110.3.8 (A:) PAS domain of steroid receptor coactivator 1A, NCo-A1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.41 E-value=0.018 Score=35.73 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=24.8
Q ss_pred ceeceecCCceeEEEEEeEEeeCCCCCEEEEE-EEe
Q psy8547 56 DYEDMQELGTPFWCLLDIVPIKNEKREVVLYL-ASH 90 (115)
Q Consensus 56 ~~~~yrKdGs~f~~~~~i~pirde~G~v~~~i-~~~ 90 (115)
.++..+|||+..|+..+..+++|+.|....|| ++.
T Consensus 69 ~yR~~~kdG~~vWv~t~~~~~~~~~~~~~~~Ii~~h 104 (109)
T d1oj5a_ 69 SYRFILNDGTMLSAHTRCKLCYPQSPDMQPFIMGIH 104 (109)
T ss_dssp CEEEECTTSCEEEEEEEEEEECC----CCCEEEEEE
T ss_pred hhhhhhccCcEEEEEEEEEEEECCCCCcccEEEEEE
Confidence 46778999999999999999999866544444 443
No 18
>d1oj5a_ d.110.3.8 (A:) PAS domain of steroid receptor coactivator 1A, NCo-A1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.22 E-value=0.076 Score=32.69 Aligned_cols=26 Identities=4% Similarity=-0.060 Sum_probs=19.5
Q ss_pred CCCceeEEEEEEEeeCCCCCEEEEEE
Q psy8547 11 QRTPFWCLLDIVPIKNEKREVVLYLA 36 (115)
Q Consensus 11 dG~~fw~~~~i~Pi~de~G~~~~fi~ 36 (115)
||+..|+..+..+++|+.|....||.
T Consensus 76 dG~~vWv~t~~~~~~~~~~~~~~~Ii 101 (109)
T d1oj5a_ 76 DGTMLSAHTRCKLCYPQSPDMQPFIM 101 (109)
T ss_dssp TSCEEEEEEEEEEECC----CCCEEE
T ss_pred cCcEEEEEEEEEEEECCCCCcccEEE
Confidence 99999999999999998777666663
No 19
>d1p0za_ d.110.6.1 (A:) Sensor kinase CitA {Klebsiella pneumoniae [TaxId: 573]}
Probab=82.53 E-value=1.4 Score=27.41 Aligned_cols=27 Identities=15% Similarity=0.224 Sum_probs=22.8
Q ss_pred EEEEEEEeeCCCCCEEEEEEEEEeccc
Q psy8547 17 CLLDIVPIKNEKREVVLYLASHKDVTN 43 (115)
Q Consensus 17 ~~~~i~Pi~de~G~~~~fi~~~~DIT~ 43 (115)
..-..+||+|++|+++|++.+--++.+
T Consensus 101 ~~~~~~PI~~~~G~viGvV~Vg~~l~~ 127 (131)
T d1p0za_ 101 SLRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp EEEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred EEEEEEEEECCCCcEEEEEEEEEEhHH
Confidence 456788999999999999998877654
No 20
>d3by8a1 d.110.6.1 (A:46-178) Fumarate sensor DcuS {Escherichia coli [TaxId: 562]}
Probab=80.38 E-value=1.2 Score=28.03 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=26.9
Q ss_pred CCCceeEEEEEEEeeCCCCCEEEEEEEEEeccch
Q psy8547 11 QRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNT 44 (115)
Q Consensus 11 dG~~fw~~~~i~Pi~de~G~~~~fi~~~~DIT~~ 44 (115)
.|+.=.-....+||++++|+++|++.+--+++.-
T Consensus 94 ~gt~g~~~~~~~Pv~~~~G~viGvV~Vg~~~~~i 127 (133)
T d3by8a1 94 RGFLAQALRVFTPIYDENHKQIGVVAIGLELSRV 127 (133)
T ss_dssp CSSSSCEEEEEEEEECTTSCEEEEEEEEEEHHHH
T ss_pred EecCceEEEEEEeeECCCCcEEEEEEEEEEHHHH
Confidence 4444456777899999999999999998877653
No 21
>d1nwza_ d.110.3.1 (A:) Photoactive yellow protein, PYP {Ectothiorhodospira halophila [TaxId: 1053]}
Probab=79.32 E-value=1.1 Score=27.39 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=36.5
Q ss_pred eeCCCCCEEEEEEEEEeccchhhhhhhc-------------------------CCCC---ceeceecCCceeEEEEEeEE
Q psy8547 24 IKNEKREVVLYLASHKDVTNTKMAQMAD-------------------------NGEG---DYEDMQELGTPFWCLLDIVP 75 (115)
Q Consensus 24 i~de~G~~~~fi~~~~DIT~~k~~e~~~-------------------------~~~e---~~~~yrKdGs~f~~~~~i~p 75 (115)
+.|.+|.++++-..+..++.....+..- ++.. .....+++|.++|+.+++.+
T Consensus 32 ~lD~~G~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~v~v~l~~ 111 (125)
T d1nwza_ 32 QLDGDGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGNLNTMFEYTFDYQMTPTKVKVHMKK 111 (125)
T ss_dssp EEETTCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTCCEEEEEEEECTTSCCEEEEEEEEE
T ss_pred EEeCCCCEEEEcHHHHHhhccchHhhcCCCHHHccCchhhhhheeeeceeeeecCCcceEEEEEeccCCcEEEEEEEEEE
Confidence 4678888887766666666555543311 1110 01126899999999999998
Q ss_pred eeCCC
Q psy8547 76 IKNEK 80 (115)
Q Consensus 76 irde~ 80 (115)
+.+.+
T Consensus 112 ~~~g~ 116 (125)
T d1nwza_ 112 ALSGD 116 (125)
T ss_dssp CSSSS
T ss_pred ecCCC
Confidence 87644
No 22
>d1p0za_ d.110.6.1 (A:) Sensor kinase CitA {Klebsiella pneumoniae [TaxId: 573]}
Probab=63.66 E-value=6.6 Score=23.98 Aligned_cols=28 Identities=14% Similarity=0.201 Sum_probs=23.3
Q ss_pred EEEEeEEeeCCCCCEEEEEEEeeecccc
Q psy8547 69 CLLDIVPIKNEKREVVLYLASHKDVTNT 96 (115)
Q Consensus 69 ~~~~i~pirde~G~v~~~i~~~~DIT~~ 96 (115)
..-...||+|++|++++++.+-.++.+.
T Consensus 101 ~~~~~~PI~~~~G~viGvV~Vg~~l~~i 128 (131)
T d1p0za_ 101 SLRGKSPIQDATGKVIGIVSVGYTIEQL 128 (131)
T ss_dssp EEEEEEEEECTTCCEEEEEEEEEEGGGC
T ss_pred EEEEEEEEECCCCcEEEEEEEEEEhHHh
Confidence 4456789999999999999998887653
No 23
>d3by8a1 d.110.6.1 (A:46-178) Fumarate sensor DcuS {Escherichia coli [TaxId: 562]}
Probab=60.03 E-value=5.5 Score=24.76 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=26.9
Q ss_pred CceeEEEEEeEEeeCCCCCEEEEEEEeeecccc
Q psy8547 64 GTPFWCLLDIVPIKNEKREVVLYLASHKDVTNT 96 (115)
Q Consensus 64 Gs~f~~~~~i~pirde~G~v~~~i~~~~DIT~~ 96 (115)
|+.-+.....+||++++|+++.++.+-.++++.
T Consensus 95 gt~g~~~~~~~Pv~~~~G~viGvV~Vg~~~~~i 127 (133)
T d3by8a1 95 GFLAQALRVFTPIYDENHKQIGVVAIGLELSRV 127 (133)
T ss_dssp SSSSCEEEEEEEEECTTSCEEEEEEEEEEHHHH
T ss_pred ecCceEEEEEEeeECCCCcEEEEEEEEEEHHHH
Confidence 555556777899999999999999998887654
No 24
>d3er7a1 d.17.4.24 (A:5-122) Uncharacterized protein Exig0174 {Exiguobacterium sibiricum 255-15 [TaxId: 262543]}
Probab=59.57 E-value=13 Score=23.14 Aligned_cols=34 Identities=12% Similarity=-0.057 Sum_probs=26.4
Q ss_pred eceecCCceeEEEEEeEEeeCCCCCEEEEEEEee
Q psy8547 58 EDMQELGTPFWCLLDIVPIKNEKREVVLYLASHK 91 (115)
Q Consensus 58 ~~yrKdGs~f~~~~~i~pirde~G~v~~~i~~~~ 91 (115)
+..+|||+.|-..=+=.+-.|.+|++++.--+-.
T Consensus 83 ~gk~~dG~~~~~~G~DiA~l~~~GKI~yL~nvp~ 116 (118)
T d3er7a1 83 CGKSADGSVFTQDGTDIARLNADGKIVYLANVPD 116 (118)
T ss_dssp EEEETTSCEEEEEEEEEEEECTTSCEEEEEEEEC
T ss_pred EeeecCCcEEEecCcchhhhcCCCcEEeeecCCC
Confidence 3579999999987766777788999988765543
No 25
>d1mzua_ d.110.3.1 (A:) PYP domain of sensor histidine kinase Ppr {Rhodospirillum centenum [TaxId: 34018]}
Probab=59.05 E-value=6.1 Score=23.18 Aligned_cols=20 Identities=5% Similarity=-0.054 Sum_probs=17.4
Q ss_pred eecCCceeEEEEEeEEeeCC
Q psy8547 60 MQELGTPFWCLLDIVPIKNE 79 (115)
Q Consensus 60 yrKdGs~f~~~~~i~pirde 79 (115)
.+|+|+++++.+++++..+.
T Consensus 82 l~~~G~~~~v~v~~~~~~~~ 101 (110)
T d1mzua_ 82 FDFQMAPVRVQIRMQNAGVP 101 (110)
T ss_dssp EECSSCEEEEEEEEEECSST
T ss_pred EecCCceEEEEEEEEEecCC
Confidence 58999999999999998754
No 26
>d1pvma3 g.41.13.1 (A:143-178) Hypothetical protein Ta0289 C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=54.45 E-value=5.8 Score=19.43 Aligned_cols=15 Identities=33% Similarity=0.640 Sum_probs=12.0
Q ss_pred EEEeeCCCCCEEEEE
Q psy8547 21 IVPIKNEKREVVLYL 35 (115)
Q Consensus 21 i~Pi~de~G~~~~fi 35 (115)
+.||+|+.|++--|-
T Consensus 12 l~pvy~~kgeikvfr 26 (36)
T d1pvma3 12 LEPVYNEKGEIKVFR 26 (36)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEeecCCCcEEEEE
Confidence 579999999986543
No 27
>d3bida1 d.348.1.1 (A:1-56) Uncharacterized protein NMB1088 {Neisseria meningitidis [TaxId: 487]}
Probab=44.39 E-value=8.9 Score=20.77 Aligned_cols=43 Identities=14% Similarity=0.091 Sum_probs=27.0
Q ss_pred ecCCceeEEEEEeEEeeCCCCCEEEEEEEeeecccchhhchhhccCCCc
Q psy8547 61 QELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGDY 109 (115)
Q Consensus 61 rKdGs~f~~~~~i~pirde~G~v~~~i~~~~DIT~~k~~E~~~~~~~~~ 109 (115)
.++|..+|. ++..+|+|+.---...+-...+..-+..+..|-.
T Consensus 8 d~~g~~rfr------Lka~Ng~vIa~Se~Y~sk~~a~~gI~sVk~na~~ 50 (56)
T d3bida1 8 DAKGEYRWR------LKAANHEIIAQGEGYTSKQNCQHAVDLLKSTTAA 50 (56)
T ss_dssp CTTSCEEEE------EECTTSCEEEECCCBSCHHHHHHHHHHHHTCCTT
T ss_pred CCCCCEEEE------EEeCCCCEEEecCCcCCHHHHHHHHHHHHHhCCC
Confidence 488999997 6889999988433333333444444555554433
No 28
>d1dd9a_ e.13.1.1 (A:) DNA primase DnaG catalytic core {Escherichia coli [TaxId: 562]}
Probab=37.44 E-value=11 Score=26.74 Aligned_cols=21 Identities=14% Similarity=0.249 Sum_probs=17.5
Q ss_pred EEEEEEeeCCCCCEEEEEEEE
Q psy8547 18 LLDIVPIKNEKREVVLYLASH 38 (115)
Q Consensus 18 ~~~i~Pi~de~G~~~~fi~~~ 38 (115)
.--+-||+|..|++++|-+-.
T Consensus 88 ~ri~fPI~d~~g~~i~f~gR~ 108 (314)
T d1dd9a_ 88 ERVMFPIRDKRGRVIGFGGRV 108 (314)
T ss_dssp SEEEEEEECTTSCEEEEEEEE
T ss_pred ceeEEEEecccceEEEEeeee
Confidence 446789999999999998754
No 29
>d2k7ia1 d.348.1.1 (A:1-62) Uncharacterized protein Atu0232 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=36.63 E-value=3.9 Score=22.78 Aligned_cols=45 Identities=13% Similarity=0.039 Sum_probs=28.5
Q ss_pred ecCCceeEEEEEeEEeeCCCCCEEEEEEEeeecccchhhchhhccCCCccc
Q psy8547 61 QELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEGDYED 111 (115)
Q Consensus 61 rKdGs~f~~~~~i~pirde~G~v~~~i~~~~DIT~~k~~E~~~~~~~~~~~ 111 (115)
.++|..+|. ++..+|+++.---.+.+-...+..-+.++..+-.++
T Consensus 9 d~~g~~rfr------L~a~Ng~iIa~Se~Y~sk~~a~~gI~sVk~na~~a~ 53 (62)
T d2k7ia1 9 DKAGEYRFR------FKASNGETMFSSEGYKAKASAIHAIESIKRNSAGAD 53 (62)
T ss_dssp CTTSCEEEE------ECCTTSCCCEEBCCSSSHHHHHHHHHHHHHHTTTSE
T ss_pred CCCCCEEEE------EEeCCCCEEEEcCCcCCHHHHHHHHHHHHHhCCCCe
Confidence 388999998 688999988754444444444455555555444333
No 30
>d3ddja2 d.37.1.1 (A:1-135) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=35.71 E-value=9.9 Score=22.61 Aligned_cols=18 Identities=11% Similarity=0.209 Sum_probs=14.6
Q ss_pred EEEEEeeCCCCCEEEEEE
Q psy8547 19 LDIVPIKNEKREVVLYLA 36 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~ 36 (115)
++..||-|++|+++|.+.
T Consensus 105 i~~lpVvd~~g~lvGiit 122 (135)
T d3ddja2 105 FGSLPVVDINDKPVGIVT 122 (135)
T ss_dssp CSEEEEECTTSCEEEEEE
T ss_pred eeEEEEEeCCCEEEEEEE
Confidence 456799999999998764
No 31
>d1vr9a3 d.37.1.1 (A:1-121) Hypothetical protein TM0892, CBS tandem {Thermotoga maritima [TaxId: 2336]}
Probab=32.41 E-value=17 Score=21.36 Aligned_cols=18 Identities=11% Similarity=0.163 Sum_probs=14.5
Q ss_pred EEEEEeeCCCCCEEEEEE
Q psy8547 19 LDIVPIKNEKREVVLYLA 36 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~ 36 (115)
....||-|++|+++|++.
T Consensus 91 ~~~lpVvde~g~~~Gvit 108 (121)
T d1vr9a3 91 EPYLPVVDEEMRLKGAVS 108 (121)
T ss_dssp CSEEEEECTTCBEEEEEE
T ss_pred ceeeeeECCCCeEEEEEE
Confidence 345799999999998764
No 32
>d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE {Enterococcus faecalis [TaxId: 1351]}
Probab=31.82 E-value=17 Score=21.65 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=16.5
Q ss_pred EEEEEeeCCCCCEEEEEEEEEecc
Q psy8547 19 LDIVPIKNEKREVVLYLASHKDVT 42 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~~~~DIT 42 (115)
+...||-|++|+++|.|. ..||-
T Consensus 96 ~~~lPVVD~~g~lvGiIt-~~Dil 118 (127)
T d2ouxa2 96 FLAVPVTDYDDHLLGIVT-VDDII 118 (127)
T ss_dssp CSEEEEECTTCBEEEEEE-HHHHH
T ss_pred CEEEEEEeCCCEEEEEEE-HHHHH
Confidence 346799999999998653 34443
No 33
>d2k49a1 d.348.1.1 (A:59-110) Uncharacterized protein SO3888 {Shewanella oneidensis [TaxId: 70863]}
Probab=31.53 E-value=11 Score=20.32 Aligned_cols=20 Identities=10% Similarity=0.358 Sum_probs=16.4
Q ss_pred ecCCceeEEEEEeEEeeCCCCCEEEE
Q psy8547 61 QELGTPFWCLLDIVPIKNEKREVVLY 86 (115)
Q Consensus 61 rKdGs~f~~~~~i~pirde~G~v~~~ 86 (115)
-|+|..+|. ++-.+|+|+.-
T Consensus 3 ak~gk~~F~------LkA~NgevI~~ 22 (52)
T d2k49a1 3 AKNDKPYFN------LKAANHQIIGT 22 (52)
T ss_dssp ETTTEEEEE------EECTTCCEEEE
T ss_pred ccCCcEEEE------EEcCCCCEEEe
Confidence 478999998 68889998774
No 34
>d2riha1 d.37.1.1 (A:2-132) Uncharacterized protein PAE2072 {Pyrobaculum aerophilum [TaxId: 13773]}
Probab=31.52 E-value=13 Score=21.98 Aligned_cols=24 Identities=25% Similarity=0.278 Sum_probs=17.3
Q ss_pred EEEEEeeCCCCCEEEEEEEEEeccc
Q psy8547 19 LDIVPIKNEKREVVLYLASHKDVTN 43 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~~~~DIT~ 43 (115)
+...||-|++|+++|.+. ..||-.
T Consensus 97 i~~lpVvd~~g~l~Giit-~~Dll~ 120 (131)
T d2riha1 97 IRHVVVVNKNGELVGVLS-IRDLCF 120 (131)
T ss_dssp CSEEEEECTTSCEEEEEE-HHHHHS
T ss_pred eEEEEEEcCCCeEEEEEE-HHHHHH
Confidence 345699999999998774 445543
No 35
>d2yzqa1 d.37.1.1 (A:123-278) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=31.50 E-value=14 Score=22.42 Aligned_cols=23 Identities=13% Similarity=0.229 Sum_probs=17.6
Q ss_pred EEEEEeeCCCCCEEEEEEEEEecc
Q psy8547 19 LDIVPIKNEKREVVLYLASHKDVT 42 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~~~~DIT 42 (115)
++..||.|++|+++|.+. ..|+.
T Consensus 35 ~~~lPVvd~~~~lvG~it-~~Dl~ 57 (156)
T d2yzqa1 35 SMALPVVDSEGNLVGIVD-ETDLL 57 (156)
T ss_dssp SSEEEEECTTSCEEEEEE-GGGGG
T ss_pred CCEEEEEeCCCCceeEEe-eeech
Confidence 456899999999999774 45554
No 36
>d2k8ea2 d.348.1.1 (A:75-126) Uncharacterized protein YegP {Escherichia coli [TaxId: 562]}
Probab=30.88 E-value=11 Score=20.30 Aligned_cols=20 Identities=10% Similarity=0.260 Sum_probs=16.2
Q ss_pred ecCCceeEEEEEeEEeeCCCCCEEEE
Q psy8547 61 QELGTPFWCLLDIVPIKNEKREVVLY 86 (115)
Q Consensus 61 rKdGs~f~~~~~i~pirde~G~v~~~ 86 (115)
-++|..+|. ++...|+|+.-
T Consensus 3 ~~~g~~~f~------LkA~NgqvI~~ 22 (52)
T d2k8ea2 3 ASNGKFYFN------LKAANHQIIGS 22 (52)
T ss_dssp ETTTEEEEE------EECTTSCEEEE
T ss_pred ccCCcEEEE------EEcCCCCEEEe
Confidence 378999998 68889998774
No 37
>d2yvxa2 d.37.1.1 (A:132-275) Magnesium transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=30.62 E-value=17 Score=22.10 Aligned_cols=24 Identities=21% Similarity=0.450 Sum_probs=18.1
Q ss_pred EEEEEeeCCCCCEEEEEEEEEeccc
Q psy8547 19 LDIVPIKNEKREVVLYLASHKDVTN 43 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~~~~DIT~ 43 (115)
+...||-|++|+++|.|. .+||-+
T Consensus 96 ~~~lPVVd~~g~lvGiIt-~~Dil~ 119 (144)
T d2yvxa2 96 FTVLPVVDEEGRLVGIVT-VDDVLD 119 (144)
T ss_dssp CSEEEEECSSCBEEEEEE-HHHHHH
T ss_pred CCEEEEEeECCEEEEEEE-HHHHHH
Confidence 456899999999999764 456654
No 38
>d1yava3 d.37.1.1 (A:13-144) Hypothetical protein YkuL {Bacillus subtilis [TaxId: 1423]}
Probab=30.42 E-value=17 Score=21.60 Aligned_cols=24 Identities=8% Similarity=0.192 Sum_probs=17.6
Q ss_pred EEEEEeeCCCCCEEEEEEEEEeccc
Q psy8547 19 LDIVPIKNEKREVVLYLASHKDVTN 43 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~~~~DIT~ 43 (115)
.+..||.|++|+++|.+ ...||..
T Consensus 35 ~s~~pVvd~~~~~vGii-t~~di~~ 58 (132)
T d1yava3 35 YTAIPVLDPSYRLHGLI-GTNMIMN 58 (132)
T ss_dssp CSEEEEECTTCBEEEEE-EHHHHHH
T ss_pred CCceEEeecccccccEE-EcchhHH
Confidence 45689999999998876 4445543
No 39
>d1f5ma_ d.110.2.1 (A:) Hypothetical protein ykl069wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.02 E-value=39 Score=21.17 Aligned_cols=24 Identities=13% Similarity=-0.031 Sum_probs=20.9
Q ss_pred EEEEEEEeeCCCCCEEEEEEEEEe
Q psy8547 17 CLLDIVPIKNEKREVVLYLASHKD 40 (115)
Q Consensus 17 ~~~~i~Pi~de~G~~~~fi~~~~D 40 (115)
.+.-+.|+...+|+++|.+.+...
T Consensus 127 ~S~l~vPl~~~~g~~~GVl~v~s~ 150 (176)
T d1f5ma_ 127 KSEIVVPIISNDGKTLGVIDIDCL 150 (176)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEES
T ss_pred cceEEecccccCCcEEEEEEeccC
Confidence 477889999999999999998764
No 40
>d2fp7b1 b.47.1.3 (B:19-170) NS3 protease {West nile virus [TaxId: 11082]}
Probab=28.72 E-value=14 Score=24.08 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=14.2
Q ss_pred EEEeeCCCCCEEEEEEE
Q psy8547 21 IVPIKNEKREVVLYLAS 37 (115)
Q Consensus 21 i~Pi~de~G~~~~fi~~ 37 (115)
-|||.|.+|+++++-+.
T Consensus 118 GSPI~n~~G~vVGLYGN 134 (152)
T d2fp7b1 118 GSPIVDKNGDVIGLYGN 134 (152)
T ss_dssp TCEEECTTSCEEEESCC
T ss_pred CCceEccCCCEEEEecc
Confidence 48999999999987643
No 41
>d1mkma2 d.110.2.2 (A:76-246) Transcriptional regulator IclR, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=28.22 E-value=25 Score=21.82 Aligned_cols=22 Identities=18% Similarity=0.025 Sum_probs=17.5
Q ss_pred EEEEEEeeCCCCCEEEEEEEEE
Q psy8547 18 LLDIVPIKNEKREVVLYLASHK 39 (115)
Q Consensus 18 ~~~i~Pi~de~G~~~~fi~~~~ 39 (115)
.-...||+|.+|.+++.+++.-
T Consensus 120 ~~iA~Pi~~~~g~~~aalsv~~ 141 (171)
T d1mkma2 120 MCVGVPIFDHNGYPVAGVSISG 141 (171)
T ss_dssp EEEEEEEECTTSCEEEEEEEEE
T ss_pred cEEEEEEECCCCCEEEEEEEEe
Confidence 4456899999999999887653
No 42
>d2k49a2 d.348.1.1 (A:1-58) Uncharacterized protein SO3888 {Shewanella oneidensis [TaxId: 70863]}
Probab=27.39 E-value=14 Score=20.07 Aligned_cols=41 Identities=10% Similarity=-0.017 Sum_probs=24.3
Q ss_pred ecCCceeEEEEEeEEeeCCCCCEEEEEEEeeecccchhhchhhccCC
Q psy8547 61 QELGTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMAQMADNGEG 107 (115)
Q Consensus 61 rKdGs~f~~~~~i~pirde~G~v~~~i~~~~DIT~~k~~E~~~~~~~ 107 (115)
.++|..+|. ++..+|+|+.--..+.+-......-+.++.-|
T Consensus 10 ~~~g~~rf~------Lka~NGevIa~Se~Y~sk~~a~~gI~sVk~na 50 (58)
T d2k49a2 10 SSNDQFKFV------LKAGNGEVILTSELYTGKSGAMNGIESVQTNS 50 (58)
T ss_dssp CTTSCEEEE------EECSSSCEEEECCCBSSHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEE------EEcCCCCEEEEcCCcCCHHHHHHHHHHHHHhC
Confidence 378999998 68899999874333333333333333444333
No 43
>d2fomb1 b.47.1.3 (B:18-167) NS3 protease {Dengue virus type 2 [TaxId: 11060]}
Probab=27.37 E-value=15 Score=23.84 Aligned_cols=17 Identities=29% Similarity=0.288 Sum_probs=13.9
Q ss_pred EEEEeeCCCCCEEEEEE
Q psy8547 20 DIVPIKNEKREVVLYLA 36 (115)
Q Consensus 20 ~i~Pi~de~G~~~~fi~ 36 (115)
+-|||.|.+|+++++-+
T Consensus 118 SGSPIin~~G~vVGLYG 134 (150)
T d2fomb1 118 SGSPIVDKKGKVVGLYG 134 (150)
T ss_dssp TTCEEECTTSCEEEETT
T ss_pred CCCceECCCCCEEEEec
Confidence 35899999999998753
No 44
>d1zfja4 d.37.1.1 (A:95-220) Type II inosine monophosphate dehydrogenase CBS domains {Streptococcus pyogenes [TaxId: 1314]}
Probab=26.51 E-value=15 Score=21.69 Aligned_cols=24 Identities=13% Similarity=0.321 Sum_probs=17.3
Q ss_pred EEEEeeCCCCCEEEEEEEEEeccch
Q psy8547 20 DIVPIKNEKREVVLYLASHKDVTNT 44 (115)
Q Consensus 20 ~i~Pi~de~G~~~~fi~~~~DIT~~ 44 (115)
...||-|++|+++|.+. ..||-..
T Consensus 92 ~~lpVVd~~g~lvGiiT-~~Dil~~ 115 (126)
T d1zfja4 92 EKLPLVDNSGRLSGLIT-IKDIEKV 115 (126)
T ss_dssp SEEEEECTTSBEEEEEE-HHHHHHH
T ss_pred cEEEEEcCCCeEEEEEE-HHHHHHH
Confidence 45699999999998763 4555443
No 45
>d2yzqa2 d.37.1.1 (A:1-122) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=26.12 E-value=25 Score=20.55 Aligned_cols=22 Identities=23% Similarity=0.187 Sum_probs=16.3
Q ss_pred EEEEeeCCCCCEEEEEEEEEecc
Q psy8547 20 DIVPIKNEKREVVLYLASHKDVT 42 (115)
Q Consensus 20 ~i~Pi~de~G~~~~fi~~~~DIT 42 (115)
...||-|++|+++|.+ ...||-
T Consensus 92 ~~lpVvd~~~~liGii-t~~dil 113 (122)
T d2yzqa2 92 RRVVVVDSKGKPVGIL-TVGDII 113 (122)
T ss_dssp SEEEEECTTSCEEEEE-EHHHHH
T ss_pred EEEEEEeCCCEEEEEE-EHHHHH
Confidence 4589999999999876 334443
No 46
>d2nyca1 d.37.1.1 (A:181-320) Nuclear protein SNF4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.96 E-value=18 Score=21.63 Aligned_cols=23 Identities=26% Similarity=0.306 Sum_probs=16.7
Q ss_pred EEEEEeeCCCCCEEEEEEEEEecc
Q psy8547 19 LDIVPIKNEKREVVLYLASHKDVT 42 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~~~~DIT 42 (115)
.+..||.|++|+++|++. ..|+-
T Consensus 40 ~~~ipVvd~~~~~vG~it-~~Di~ 62 (140)
T d2nyca1 40 VSSVPIIDENGYLINVYE-AYDVL 62 (140)
T ss_dssp CSEEEEECTTCBEEEEEE-HHHHH
T ss_pred CcEEEEEecCCeEcceeh-hhHHH
Confidence 356799999999888764 44443
No 47
>d1tf1a_ d.110.2.2 (A:) Transcriptional regulator AllR, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.47 E-value=30 Score=21.72 Aligned_cols=23 Identities=13% Similarity=-0.038 Sum_probs=18.3
Q ss_pred EEEEEEEeeCCCCCEEEEEEEEE
Q psy8547 17 CLLDIVPIKNEKREVVLYLASHK 39 (115)
Q Consensus 17 ~~~~i~Pi~de~G~~~~fi~~~~ 39 (115)
+.--..||+|.+|++++.+++.-
T Consensus 130 v~~iA~PV~~~~g~~~~alsv~~ 152 (184)
T d1tf1a_ 130 LNCIASAIYDDVGSVVAAISISG 152 (184)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEE
T ss_pred ceEEEEEEECCCCCEEEEEEEEE
Confidence 34567899999999998887654
No 48
>d1qzga_ b.40.4.3 (A:) Protection of telomeres protein 1, Pot1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=25.02 E-value=11 Score=24.96 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=29.6
Q ss_pred eccCCCceeEEEEEEEeeCCCCCEEEEEEEEEeccchhhh
Q psy8547 8 NYRQRTPFWCLLDIVPIKNEKREVVLYLASHKDVTNTKMA 47 (115)
Q Consensus 8 ~YrdG~~fw~~~~i~Pi~de~G~~~~fi~~~~DIT~~k~~ 47 (115)
.||-|+.=|..+.++-=....|.++.++++..|.+..+..
T Consensus 15 ~~~~~e~~~~~~~~~~~~~k~~~~VnviGVV~~~~~P~rs 54 (170)
T d1qzga_ 15 EYKIGELTFQSIRSSQELQKKNTIVNLFGIVKDFTPSRQS 54 (170)
T ss_dssp EEEETTEEEECHHHHTSCCSSCEEEEEEEEEEEEEEEEEC
T ss_pred ceeeeeeeeehhhhhHHHhccCCEEEEEEEEeeccCceec
Confidence 4566666666665555555678899999999999988775
No 49
>d1o50a3 d.37.1.1 (A:1-145) Hypothetical protein TM0935 {Thermotoga maritima [TaxId: 2336]}
Probab=24.06 E-value=21 Score=21.25 Aligned_cols=18 Identities=33% Similarity=0.486 Sum_probs=14.3
Q ss_pred EEEEEeeCCCCCEEEEEE
Q psy8547 19 LDIVPIKNEKREVVLYLA 36 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~ 36 (115)
++..||-|++|+++|.+.
T Consensus 114 i~~lpVVd~~g~i~Gvit 131 (145)
T d1o50a3 114 IQEMPVVDEKGEIVGDLN 131 (145)
T ss_dssp CSEEEEECTTSCEEEEEE
T ss_pred ceEEEEEeCCCeEEEEEE
Confidence 345699999999998764
No 50
>d2ef7a1 d.37.1.1 (A:1-127) Uncharacterized protein ST2348 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=24.04 E-value=21 Score=20.99 Aligned_cols=18 Identities=11% Similarity=0.335 Sum_probs=14.2
Q ss_pred EEEEEeeCCCCCEEEEEE
Q psy8547 19 LDIVPIKNEKREVVLYLA 36 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~ 36 (115)
++..||-|++|+++|.+.
T Consensus 98 ~~~l~Vvd~~~~lvGiit 115 (127)
T d2ef7a1 98 IRHLPVVDDKGNLKGIIS 115 (127)
T ss_dssp CSEEEEECTTSCEEEEEE
T ss_pred ceEEEEEeCCCeEEEEEE
Confidence 345799999999998763
No 51
>d2o16a3 d.37.1.1 (A:20-158) Hypothetical protein VC0737 {Vibrio cholerae [TaxId: 666]}
Probab=23.18 E-value=22 Score=21.27 Aligned_cols=18 Identities=17% Similarity=0.407 Sum_probs=14.4
Q ss_pred EEEEEeeCCCCCEEEEEE
Q psy8547 19 LDIVPIKNEKREVVLYLA 36 (115)
Q Consensus 19 ~~i~Pi~de~G~~~~fi~ 36 (115)
.+..||.|++|+++|.+.
T Consensus 33 ~~~lpVvd~~~~~~Giit 50 (139)
T d2o16a3 33 IRHVPIVDANKKLLGIVS 50 (139)
T ss_dssp CSEEEEECTTCBEEEEEE
T ss_pred CCeeeeeccccccccccc
Confidence 346899999999988764
No 52
>d2o9aa1 d.110.2.2 (A:1-180) Transcriptional regulator IclR, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.75 E-value=40 Score=20.91 Aligned_cols=23 Identities=17% Similarity=-0.025 Sum_probs=18.9
Q ss_pred EEEEEEEeeCCCCCEEEEEEEEE
Q psy8547 17 CLLDIVPIKNEKREVVLYLASHK 39 (115)
Q Consensus 17 ~~~~i~Pi~de~G~~~~fi~~~~ 39 (115)
+.--..||+|.+|.+++.+++.-
T Consensus 126 v~~iA~PV~~~~g~~~aalsv~~ 148 (180)
T d2o9aa1 126 LRCLAACIFDEHREPFAAISISG 148 (180)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEE
T ss_pred ceEEEEEEECCCCCEEEEEEEEE
Confidence 45667899999999999887754
No 53
>d3ddja1 d.37.1.1 (A:136-276) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=21.97 E-value=37 Score=19.88 Aligned_cols=22 Identities=14% Similarity=0.214 Sum_probs=15.7
Q ss_pred EEEEeeCCCCCEEEEEEEEEecc
Q psy8547 20 DIVPIKNEKREVVLYLASHKDVT 42 (115)
Q Consensus 20 ~i~Pi~de~G~~~~fi~~~~DIT 42 (115)
...||-|++|+++|.| ...||-
T Consensus 105 ~~l~Vvd~~~~~iGiI-t~~Dil 126 (141)
T d3ddja1 105 GSLLILNKDNTIRGII-TERDLL 126 (141)
T ss_dssp SEEEEECTTSCEEEEE-EHHHHH
T ss_pred CEEEEEccCCEEEEEE-EHHHHH
Confidence 4579999999999865 334443
No 54
>d1pvma4 d.37.1.1 (A:1-142) Hypothetical protein Ta0289 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=21.48 E-value=38 Score=20.20 Aligned_cols=23 Identities=13% Similarity=0.238 Sum_probs=16.2
Q ss_pred EEEEeeCCCCCEEEEEEEEEeccc
Q psy8547 20 DIVPIKNEKREVVLYLASHKDVTN 43 (115)
Q Consensus 20 ~i~Pi~de~G~~~~fi~~~~DIT~ 43 (115)
...||-|++|+++|.+. ..||-.
T Consensus 101 ~~lpVvd~~g~l~Giit-~~Dil~ 123 (142)
T d1pvma4 101 ERCAVVDDPGRVVGIVT-LTDLSR 123 (142)
T ss_dssp SEEEEECTTCCEEEEEE-HHHHTT
T ss_pred cEEEEEecCCEEEEEEE-HHHHHH
Confidence 35699999999998764 334443
No 55
>d1y5ha3 d.37.1.1 (A:2-124) Hypothetical protein Rv2626c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.41 E-value=16 Score=21.42 Aligned_cols=21 Identities=19% Similarity=0.387 Sum_probs=15.4
Q ss_pred EEEEeeCCCCCEEEEEEEEEec
Q psy8547 20 DIVPIKNEKREVVLYLASHKDV 41 (115)
Q Consensus 20 ~i~Pi~de~G~~~~fi~~~~DI 41 (115)
...||.|++|+++|++. .+|+
T Consensus 33 ~~~pVvd~~~~~~Giit-~~Di 53 (123)
T d1y5ha3 33 GALPICGDDDRLHGMLT-DRDI 53 (123)
T ss_dssp SEEEEECGGGBEEEEEE-HHHH
T ss_pred CceEEEeccchhhhhhh-hhhH
Confidence 56799999999888654 3344
No 56
>d2qf3a1 b.47.1.1 (A:43-252) Stress sensor protease DegS, catalytic domain {Escherichia coli [TaxId: 562]}
Probab=21.31 E-value=26 Score=22.45 Aligned_cols=17 Identities=12% Similarity=-0.156 Sum_probs=14.1
Q ss_pred EEEeeCCCCCEEEEEEE
Q psy8547 21 IVPIKNEKREVVLYLAS 37 (115)
Q Consensus 21 i~Pi~de~G~~~~fi~~ 37 (115)
-.|+.|++|+++|.+..
T Consensus 160 GGPv~n~~G~vVGI~~~ 176 (210)
T d2qf3a1 160 GGALVNSLGELMGINTL 176 (210)
T ss_dssp TCEEEETTCCEEEEEEE
T ss_pred CCceEeecCEEEEEEEE
Confidence 45999999999997743
No 57
>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus [TaxId: 1280]}
Probab=21.21 E-value=28 Score=23.02 Aligned_cols=16 Identities=25% Similarity=-0.010 Sum_probs=13.3
Q ss_pred EEEeeCCCCCEEEEEE
Q psy8547 21 IVPIKNEKREVVLYLA 36 (115)
Q Consensus 21 i~Pi~de~G~~~~fi~ 36 (115)
-+||.|++|++++...
T Consensus 187 GgPv~n~~G~vVGI~~ 202 (246)
T d1qtfa_ 187 GSGIFNLKGELIGIHS 202 (246)
T ss_dssp TCEEECTTCCEEEEEE
T ss_pred CCcEECCCCeEEEEEe
Confidence 4899999999988654
No 58
>d2p7ja2 d.110.6.2 (A:9-180) GGDEF family protein VP0354 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=20.26 E-value=59 Score=19.77 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=19.7
Q ss_pred EEEEEEEeeCCCCCEEEEEEEEEeccc
Q psy8547 17 CLLDIVPIKNEKREVVLYLASHKDVTN 43 (115)
Q Consensus 17 ~~~~i~Pi~de~G~~~~fi~~~~DIT~ 43 (115)
+.....||++ +|++.|++.+--|++.
T Consensus 142 ~i~~a~Pv~~-~g~~~Gvlvi~i~l~~ 167 (172)
T d2p7ja2 142 SLRILMPISV-NDVRQGYLVLNVDIEY 167 (172)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEEEHHH
T ss_pred EEEEEEEEcC-CCEEEEEEEEEEcHHH
Confidence 3445679986 8999999988777653
Done!