BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8548
(102 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O89047|KCNH3_RAT Potassium voltage-gated channel subfamily H member 3 OS=Rattus
norvegicus GN=Kcnh3 PE=2 SV=1
Length = 1087
Score = 125 bits (314), Expect = 7e-29, Method: Composition-based stats.
Identities = 52/79 (65%), Positives = 66/79 (83%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
+SNFVLGNAQV L+P+VYCSDGFC+L+GF+RA++MQ+GCAC FLYGPDTSE + QI K
Sbjct: 26 HSNFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRK 85
Query: 62 ALESKTELKLEVIFYKKNG 80
AL+ E K E+I Y+K+G
Sbjct: 86 ALDEHKEFKAELILYRKSG 104
>sp|Q9WVJ0|KCNH3_MOUSE Potassium voltage-gated channel subfamily H member 3 OS=Mus
musculus GN=Kcnh3 PE=2 SV=2
Length = 1087
Score = 125 bits (314), Expect = 7e-29, Method: Composition-based stats.
Identities = 52/79 (65%), Positives = 66/79 (83%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
+SNFVLGNAQV L+P+VYCSDGFC+L+GF+RA++MQ+GCAC FLYGPDTSE + QI K
Sbjct: 26 HSNFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRK 85
Query: 62 ALESKTELKLEVIFYKKNG 80
AL+ E K E+I Y+K+G
Sbjct: 86 ALDEHKEFKAELILYRKSG 104
>sp|Q9ULD8|KCNH3_HUMAN Potassium voltage-gated channel subfamily H member 3 OS=Homo
sapiens GN=KCNH3 PE=2 SV=2
Length = 1083
Score = 125 bits (314), Expect = 7e-29, Method: Composition-based stats.
Identities = 52/79 (65%), Positives = 66/79 (83%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
+SNFVLGNAQV L+P+VYCSDGFC+L+GF+RA++MQ+GCAC FLYGPDTSE + QI K
Sbjct: 26 HSNFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRK 85
Query: 62 ALESKTELKLEVIFYKKNG 80
AL+ E K E+I Y+K+G
Sbjct: 86 ALDEHKEFKAELILYRKSG 104
>sp|Q96L42|KCNH8_HUMAN Potassium voltage-gated channel subfamily H member 8 OS=Homo
sapiens GN=KCNH8 PE=2 SV=2
Length = 1107
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/79 (65%), Positives = 66/79 (83%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
+SNF+L NAQV +PIVYCSDGFCEL+GFAR ++MQK C+CKFL+G +T+E+ QIEK
Sbjct: 26 HSNFILANAQVAKGFPIVYCSDGFCELAGFARTEVMQKSCSCKFLFGVETNEQLMLQIEK 85
Query: 62 ALESKTELKLEVIFYKKNG 80
+LE KTE K E++FYKKNG
Sbjct: 86 SLEEKTEFKGEIMFYKKNG 104
>sp|Q9QWS8|KCNH8_RAT Potassium voltage-gated channel subfamily H member 8 OS=Rattus
norvegicus GN=Kcnh8 PE=2 SV=2
Length = 1102
Score = 118 bits (296), Expect = 8e-27, Method: Composition-based stats.
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
+SNF+L NAQV +PIVYCSDGFCEL+GFAR ++MQK C+CKFL+G +T+E+ QIEK
Sbjct: 26 HSNFILANAQVAKGFPIVYCSDGFCELAGFARTEVMQKSCSCKFLFGVETNEQLMLQIEK 85
Query: 62 ALESKTELKLEVIFYKKNG 80
+LE K E K E++FYKKNG
Sbjct: 86 SLEEKVEFKGEIMFYKKNG 104
>sp|P59111|KCNH8_MOUSE Potassium voltage-gated channel subfamily H member 8 OS=Mus
musculus GN=Kcnh8 PE=2 SV=2
Length = 1102
Score = 118 bits (296), Expect = 9e-27, Method: Composition-based stats.
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
+SNF+L NAQV +PIVYCSDGFCEL+GFAR ++MQK C+CKFL+G +T+E+ QIEK
Sbjct: 26 HSNFILANAQVAKGFPIVYCSDGFCELAGFARTEVMQKSCSCKFLFGVETNEQLMLQIEK 85
Query: 62 ALESKTELKLEVIFYKKNG 80
+LE K E K E++FYKKNG
Sbjct: 86 SLEEKVEFKGEIMFYKKNG 104
>sp|Q9R1T9|KCNH4_RAT Potassium voltage-gated channel subfamily H member 4 OS=Rattus
norvegicus GN=Kcnh4 PE=2 SV=1
Length = 1017
Score = 111 bits (278), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/79 (56%), Positives = 62/79 (78%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
+SNF+L NAQ P +PIVYCSDGFCEL+G+ R ++MQK C+C+FLYGP+TSE +++K
Sbjct: 26 HSNFLLANAQGPRGFPIVYCSDGFCELTGYGRTEVMQKTCSCRFLYGPETSEPALQRLQK 85
Query: 62 ALESKTELKLEVIFYKKNG 80
ALE E + E+ FY+K+G
Sbjct: 86 ALEGHQEHRAEICFYRKDG 104
>sp|Q9UQ05|KCNH4_HUMAN Potassium voltage-gated channel subfamily H member 4 OS=Homo
sapiens GN=KCNH4 PE=2 SV=1
Length = 1017
Score = 107 bits (267), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/79 (55%), Positives = 60/79 (75%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
+SNF+L NAQ +PIVYCSDGFCEL+G+ R ++MQK C+C+FLYGP+TSE ++ K
Sbjct: 26 HSNFLLANAQGTRGFPIVYCSDGFCELTGYGRTEVMQKTCSCRFLYGPETSEPALQRLHK 85
Query: 62 ALESKTELKLEVIFYKKNG 80
ALE E + E+ FY+K+G
Sbjct: 86 ALEGHQEHRAEICFYRKDG 104
>sp|O54852|KCNH7_RAT Potassium voltage-gated channel subfamily H member 7 OS=Rattus
norvegicus GN=Kcnh7 PE=1 SV=1
Length = 1195
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
N F++ NA+V + I+YC+DGFCE++GF+R +MQK C C FL+GP+T QI +
Sbjct: 26 NKKFIIANARVQNC-AIIYCNDGFCEMTGFSRPDVMQKPCTCDFLHGPETKRHDIAQIAQ 84
Query: 62 ALESKTELKLEVIFYKKNG 80
AL E K+EV +Y KNG
Sbjct: 85 ALLGSEERKVEVTYYHKNG 103
>sp|Q9ER47|KCNH7_MOUSE Potassium voltage-gated channel subfamily H member 7 OS=Mus
musculus GN=Kcnh7 PE=2 SV=2
Length = 1195
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
N F++ NA+V + I+YC+DGFCE++GF+R +MQK C C FL+GP+T QI +
Sbjct: 26 NKKFIIANARVQNC-AIIYCNDGFCEMTGFSRPDVMQKPCTCDFLHGPETKRHDIAQIAQ 84
Query: 62 ALESKTELKLEVIFYKKNG 80
AL E K+EV +Y KNG
Sbjct: 85 ALLGSEERKVEVTYYHKNG 103
>sp|Q9NS40|KCNH7_HUMAN Potassium voltage-gated channel subfamily H member 7 OS=Homo
sapiens GN=KCNH7 PE=2 SV=2
Length = 1196
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
N F++ NA+V + I+YC+DGFCE++GF+R +MQK C C FL+GP+T QI +
Sbjct: 26 NKKFIIANARVQNC-AIIYCNDGFCEMTGFSRPDVMQKPCTCDFLHGPETKRHDIAQIAQ 84
Query: 62 ALESKTELKLEVIFYKKNG 80
AL E K+EV +Y KNG
Sbjct: 85 ALLGSEERKVEVTYYHKNG 103
>sp|Q63472|KCNH1_RAT Potassium voltage-gated channel subfamily H member 1 OS=Rattus
norvegicus GN=Kcnh1 PE=1 SV=1
Length = 962
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
++NFVLGNAQ+ +PIVY +DGFC+LSG+ RA++MQK AC F+YG T ++ ++ +
Sbjct: 27 DTNFVLGNAQIVD-WPIVYSNDGFCKLSGYHRAEVMQKSSACSFMYGELTDKDTVEKVRQ 85
Query: 62 ALESKTELKLEVIFYKKN 79
E+ E++ YKKN
Sbjct: 86 TFENYEMNSFEILMYKKN 103
>sp|Q60603|KCNH1_MOUSE Potassium voltage-gated channel subfamily H member 1 OS=Mus
musculus GN=Kcnh1 PE=1 SV=1
Length = 989
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
++NFVLGNAQ+ +PIVY +DGFC+LSG+ RA++MQK AC F+YG T ++ ++ +
Sbjct: 27 DTNFVLGNAQIVD-WPIVYSNDGFCKLSGYHRAEVMQKSSACSFMYGELTDKDTVEKVRQ 85
Query: 62 ALESKTELKLEVIFYKKN 79
E+ E++ YKKN
Sbjct: 86 TFENYEMNSFEILMYKKN 103
>sp|Q02280|KCNAE_DROME Potassium voltage-gated channel protein eag OS=Drosophila
melanogaster GN=eag PE=1 SV=2
Length = 1174
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGC--ACKFLYGPDTSEEHKTQI 59
+S+F+L NAQ+ +PIVYC++ FC++SG+ RA++MQK C C F+YG T +E ++
Sbjct: 28 DSSFLLANAQIVD-FPIVYCNESFCKISGYNRAEVMQKSCRYVCGFMYGELTDKETVGRL 86
Query: 60 EKALESKTELKLEVIFYKKN 79
E LE++ + + E++ YKKN
Sbjct: 87 EYTLENQQQDQFEILLYKKN 106
>sp|O95259|KCNH1_HUMAN Potassium voltage-gated channel subfamily H member 1 OS=Homo
sapiens GN=KCNH1 PE=1 SV=1
Length = 989
Score = 80.1 bits (196), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
++NFVLGNAQ+ +PIVY +DGFC+LSG+ RA++MQK C F+YG T ++ ++ +
Sbjct: 27 DTNFVLGNAQIVD-WPIVYSNDGFCKLSGYHRAEVMQKSSTCSFMYGELTDKDTIEKVRQ 85
Query: 62 ALESKTELKLEVIFYKKN 79
E+ E++ YKKN
Sbjct: 86 TFENYEMNSFEILMYKKN 103
>sp|O18965|KCNH1_BOVIN Potassium voltage-gated channel subfamily H member 1 OS=Bos taurus
GN=KCNH1 PE=2 SV=2
Length = 987
Score = 80.1 bits (196), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 2 NSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEK 61
++NFVLGNAQ+ +PIVY +DGFC+LSG+ RA++MQK C F+YG T ++ ++ +
Sbjct: 27 DTNFVLGNAQIVD-WPIVYSNDGFCKLSGYHRAEVMQKSSTCSFMYGELTDKDTIEKVRQ 85
Query: 62 ALESKTELKLEVIFYKKN 79
E+ E++ YKKN
Sbjct: 86 TFENYEMNSFEILMYKKN 103
>sp|O35219|KCNH2_MOUSE Potassium voltage-gated channel subfamily H member 2 OS=Mus
musculus GN=Kcnh2 PE=2 SV=2
Length = 1162
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
F++ NA+V + ++YC+DGFCEL G++RA++MQ+ C C FL+GP T QI +AL
Sbjct: 29 FIIANARVENC-AVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALL 87
Query: 65 SKTELKLEVIFYKKNG 80
E K+E+ FY+K+G
Sbjct: 88 GAEERKVEIAFYRKDG 103
>sp|O08962|KCNH2_RAT Potassium voltage-gated channel subfamily H member 2 OS=Rattus
norvegicus GN=Kcnh2 PE=1 SV=1
Length = 1163
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
F++ NA+V + ++YC+DGFCEL G++RA++MQ+ C C FL+GP T QI +AL
Sbjct: 29 FIIANARVENC-AVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALL 87
Query: 65 SKTELKLEVIFYKKNG 80
E K+E+ FY+K+G
Sbjct: 88 GAEERKVEIAFYRKDG 103
>sp|Q12809|KCNH2_HUMAN Potassium voltage-gated channel subfamily H member 2 OS=Homo
sapiens GN=KCNH2 PE=1 SV=1
Length = 1159
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
F++ NA+V + ++YC+DGFCEL G++RA++MQ+ C C FL+GP T QI +AL
Sbjct: 29 FIIANARVENC-AVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALL 87
Query: 65 SKTELKLEVIFYKKNG 80
E K+E+ FY+K+G
Sbjct: 88 GAEERKVEIAFYRKDG 103
>sp|Q8WNY2|KCNH2_RABIT Potassium voltage-gated channel subfamily H member 2 OS=Oryctolagus
cuniculus GN=KCNH2 PE=2 SV=3
Length = 1161
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
F++ NA+V + ++YC+DGFCEL G++RA++MQ+ C C FL+GP T QI +AL
Sbjct: 29 FIIANARVENC-AVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALL 87
Query: 65 SKTELKLEVIFYKKNG 80
E K+E+ FY+K+G
Sbjct: 88 GAEERKVEIAFYRKDG 103
>sp|Q9TSZ3|KCNH2_CANFA Potassium voltage-gated channel subfamily H member 2 OS=Canis
familiaris GN=KCNH2 PE=2 SV=1
Length = 1158
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
F++ NA+V + ++YC+DGFCEL G++RA++MQ+ C C FL+GP T QI +AL
Sbjct: 29 FIIANARVENC-AVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALL 87
Query: 65 SKTELKLEVIFYKKNG 80
E K+E+ FY+K+G
Sbjct: 88 GAEERKVEIAFYRKDG 103
>sp|O54853|KCNH6_RAT Potassium voltage-gated channel subfamily H member 6 OS=Rattus
norvegicus GN=Kcnh6 PE=1 SV=1
Length = 950
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
F++ NAQ+ + I+YC+DGFCEL G++R ++MQ+ C C FL GP+T +++ +AL
Sbjct: 29 FLIANAQMENC-AIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPSSAVSRLAQALL 87
Query: 65 SKTELKLEVIFYKKNG 80
E K+++++Y+K+
Sbjct: 88 GAEECKVDILYYRKDA 103
>sp|Q9H252|KCNH6_HUMAN Potassium voltage-gated channel subfamily H member 6 OS=Homo
sapiens GN=KCNH6 PE=1 SV=1
Length = 994
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
F++ NAQ+ + I+YC+DGFCEL G++R ++MQ+ C C FL GP+T +++ +AL
Sbjct: 29 FLIANAQMENC-AIIYCNDGFCELFGYSRVEVMQQPCTCDFLTGPNTPSSAVSRLAQALL 87
Query: 65 SKTELKLEVIFYKKNG 80
E K+++++Y+K+
Sbjct: 88 GAEECKVDILYYRKDA 103
>sp|Q8NCM2|KCNH5_HUMAN Potassium voltage-gated channel subfamily H member 5 OS=Homo
sapiens GN=KCNH5 PE=1 SV=3
Length = 988
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 3 SNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKA 62
S+F+LGNAQ+ +P+VY +DGFC+LSG+ RA +MQK C F+YG T ++ ++ +
Sbjct: 26 SSFLLGNAQIVD-WPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQT 84
Query: 63 LESKTELKLEVIFYKKN 79
++ EV+ YKKN
Sbjct: 85 FDNYESNCFEVLLYKKN 101
>sp|Q920E3|KCNH5_MOUSE Potassium voltage-gated channel subfamily H member 5 OS=Mus
musculus GN=Kcnh5 PE=2 SV=3
Length = 988
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 3 SNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKA 62
S+F+LGNAQ+ +P+VY +DGFC+LSG+ RA +MQK C F+YG T ++ ++ +
Sbjct: 26 SSFLLGNAQIVD-WPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQT 84
Query: 63 LESKTELKLEVIFYKKN 79
++ EV+ YKKN
Sbjct: 85 FDNYESNCFEVLLYKKN 101
>sp|Q9EPI9|KCNH5_RAT Potassium voltage-gated channel subfamily H member 5 OS=Rattus
norvegicus GN=Kcnh5 PE=2 SV=1
Length = 988
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 3 SNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKA 62
S+F+LGNAQ+ +P+VY +DGFC+LSG+ RA +MQK C F+YG T ++ ++ +
Sbjct: 26 SSFLLGNAQIVD-WPVVYSNDGFCKLSGYHRADVMQKSSTCSFMYGELTDKKTIEKVRQT 84
Query: 63 LESKTELKLEVIFYKKN 79
++ EV+ YKKN
Sbjct: 85 FDNYESNCFEVLLYKKN 101
>sp|Q9ST27|PHOT2_ORYSJ Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1
Length = 907
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 1 MNSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIE 60
+ NFV+ + ++P PI++ SD F EL+ + R +I+ G C+FL GP+T + +I
Sbjct: 386 IEKNFVITDPRIPD-NPIIFASDSFLELTEYTREEIL--GRNCRFLQGPETDQGTVDKIR 442
Query: 61 KALESKTELKLEVIFYKKNG 80
+A+ + E+ +++I Y K+G
Sbjct: 443 EAIREQKEITVQLINYTKSG 462
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 1 MNSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIE 60
+ FV+ +A P PI+Y S+GF ++G++ +++ G C+FL GPDT +I
Sbjct: 100 LQQTFVVSDATRPDC-PIIYASEGFFTMTGYSPREVV--GRNCRFLQGPDTDAAEVAKIR 156
Query: 61 KALESKTELKLEVIFYKKNG 80
A++ ++ Y+K+G
Sbjct: 157 DAVKHGRSFCGRLLNYRKDG 176
>sp|P93025|PHOT2_ARATH Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2
Length = 915
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 1 MNSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIE 60
+ NFV+ + ++P PI++ SD F EL+ ++R +I+ G C+FL GP+T + +I
Sbjct: 387 IEKNFVISDPRLPD-NPIIFASDSFLELTEYSREEIL--GRNCRFLQGPETDQATVQKIR 443
Query: 61 KALESKTELKLEVIFYKKNG 80
A+ + E+ +++I Y K+G
Sbjct: 444 DAIRDQREITVQLINYTKSG 463
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 1 MNSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIE 60
+ FV+ +A P PIVY S GF ++G++ +I+ G C+FL GPDT + +I
Sbjct: 131 LQQTFVVSDATQPHC-PIVYASSGFFTMTGYSSKEIV--GRNCRFLQGPDTDKNEVAKIR 187
Query: 61 KALESKTELKLEVIFYKKNG 80
+++ ++ YKK+G
Sbjct: 188 DCVKNGKSYCGRLLNYKKDG 207
>sp|O48963|PHOT1_ARATH Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1
Length = 996
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 1 MNSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIE 60
+ NFV+ + ++P PI++ SD F EL+ ++R +I+ G C+FL GP+T +I
Sbjct: 473 IEKNFVITDPRLPD-NPIIFASDSFLELTEYSREEIL--GRNCRFLQGPETDLTTVKKIR 529
Query: 61 KALESKTELKLEVIFYKKNG 80
A++++TE+ +++I Y K+G
Sbjct: 530 NAIDNQTEVTVQLINYTKSG 549
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
FV+ +A P YPI+Y S GF ++G+ +++ G C+FL G T + +I + L
Sbjct: 199 FVVSDATKPD-YPIMYASAGFFNMTGYTSKEVV--GRNCRFLQGSGTDADELAKIRETLA 255
Query: 65 SKTELKLEVIFYKKNG 80
+ ++ YKK+G
Sbjct: 256 AGNNYCGRILNYKKDG 271
>sp|Q2RBR1|PHT1B_ORYSJ Phototropin-1B OS=Oryza sativa subsp. japonica GN=PHOT1B PE=1 SV=2
Length = 921
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 1 MNSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIE 60
+ NFV+ + ++P PI++ SD F +L+ + R +I+ G C+FL GP+T +I
Sbjct: 411 IEKNFVITDPRLPD-NPIIFASDSFLQLTEYNREEIL--GRNCRFLQGPETDRATVRKIR 467
Query: 61 KALESKTELKLEVIFYKKNG 80
A++++ E+ +++I Y K+G
Sbjct: 468 DAIDNQAEVTVQLINYTKSG 487
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
FV+ +A P+ +PI+Y S GF ++G+ +++ G C+FL G T +I ++L
Sbjct: 138 FVVSDATHPN-HPIMYASAGFFNMTGYTSKEVV--GRNCRFLQGSGTDPHEIDKIRQSLA 194
Query: 65 SKTELKLEVIFYKKNG 80
+ + ++ YKK+G
Sbjct: 195 NGSNYCGRILNYKKDG 210
>sp|Q2QYY8|PHT1A_ORYSJ Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2
Length = 921
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 1 MNSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIE 60
+ NFV+ + ++P PI++ SD F +L+ + R +I+ G C+FL GP+T +I
Sbjct: 411 IEKNFVITDPRLPD-NPIIFASDSFLQLTEYNREEIL--GRNCRFLQGPETDRATVRKIR 467
Query: 61 KALESKTELKLEVIFYKKNG 80
A++++ E+ +++I Y K+G
Sbjct: 468 DAIDNQAEVTVQLINYTKSG 487
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 5 FVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALE 64
FV+ +A P+ +PI+Y S GF ++G+ +++ G C+FL G T +I ++L
Sbjct: 138 FVVSDATHPN-HPIMYASAGFFNMTGYTSKEVV--GRNCRFLQGSGTDPHEIDKIRQSLA 194
Query: 65 SKTELKLEVIFYKKNG 80
+ + ++ YKK+G
Sbjct: 195 NGSNYCGRILNYKKDG 210
>sp|Q4ZSY3|LOVHK_PSEU2 Blue-light-activated protein OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=Psyr_2700 PE=3 SV=1
Length = 534
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 17 PIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALESKTELKLEVIFY 76
PI++ + F E++G+A +I+ G C+FL GPDT I A++ + ++ E++ Y
Sbjct: 46 PIIFANRAFLEMTGYASEEII--GSNCRFLQGPDTDRTAVQSIRDAIDQRVDISTEILNY 103
Query: 77 KKNG 80
+K+G
Sbjct: 104 RKDG 107
>sp|A6X554|LOVHK_OCHA4 Blue-light-activated histidine kinase OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=Oant_3652
PE=3 SV=1
Length = 491
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 6 VLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALES 65
++ N ++P PI++ ++ F L+G+ +I+ K C +FL GP T +H I ALE+
Sbjct: 35 LITNPRLPD-NPIIFANEAFQNLTGYEADEIIGKNC--RFLQGPGTDPKHVEIIHSALEA 91
Query: 66 KTELKLEVIFYKKNG 80
+ ++++++ YKK+G
Sbjct: 92 EQSVEIDILNYKKSG 106
>sp|Q881J7|LOVHK_PSESM Blue-light-activated protein OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=PSPTO_2896 PE=1 SV=1
Length = 534
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 17 PIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALESKTELKLEVIFY 76
PI++ + F E++G+ +I+ G C+FL GPDT I A+ + ++ E+I Y
Sbjct: 46 PIIFSNRAFLEMTGYTAEEIL--GTNCRFLQGPDTDPAVVQSIRDAIAQRNDISAEIINY 103
Query: 77 KKNG 80
+K+G
Sbjct: 104 RKDG 107
>sp|Q48IV1|LOVHK_PSE14 Blue-light-activated protein OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=PSPPH_2483 PE=3
SV=2
Length = 534
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 17 PIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALESKTELKLEVIFY 76
PI++ + F E++G++ +I+ G C+FL GP+T I +A++ + ++ E++ Y
Sbjct: 46 PIIFSNRAFLEMTGYSSEEII--GTNCRFLQGPETDRAVVQSIREAIDERVDISTEILNY 103
Query: 77 KKNG 80
+K+G
Sbjct: 104 RKDG 107
>sp|Q2NCA3|LVHK1_ERYLH Blue-light-activated histidine kinase 1 OS=Erythrobacter litoralis
(strain HTCC2594) GN=ELI_02980 PE=1 SV=1
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 17 PIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALESKTELKLEVIFY 76
P+VY + F +L+G+AR +I+ G C+FL G DT E ++ + + ++ ++++ Y
Sbjct: 61 PVVYVNQAFLDLTGYAREEIV--GRNCRFLQGADTDPEQVRKLREGIAAERYTVVDLLNY 118
Query: 77 KKNG 80
+K+G
Sbjct: 119 RKDG 122
>sp|O34627|PHOT_BACSU Blue-light photoreceptor OS=Bacillus subtilis (strain 168) GN=pfyP
PE=1 SV=1
Length = 261
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 17 PIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALESKTELKLEVIFY 76
PIVY + GF +++G+ +I+ K C +FL G T I AL++K + +++ Y
Sbjct: 38 PIVYVNQGFVQMTGYETEEILGKNC--RFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNY 95
Query: 77 KKNG---YHEEEEEEEEEEEK 94
KK+G ++E + E E+K
Sbjct: 96 KKDGTMFWNELNIDPMEIEDK 116
>sp|B2SB67|LOVHK_BRUA1 Blue-light-activated histidine kinase OS=Brucella abortus (strain
S19) GN=BAbS19_II06090 PE=3 SV=1
Length = 489
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 6 VLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALES 65
++ N +P PIV+ + F +L+G+ ++M G C+FL G T H I+ A+ +
Sbjct: 35 LITNPHLPD-NPIVFANPAFLKLTGYEADEVM--GRNCRFLQGHGTDPAHVRAIKSAIAA 91
Query: 66 KTELKLEVIFYKKNG 80
+ + +++I YKK+G
Sbjct: 92 EKPIDIDIINYKKSG 106
>sp|A5VUS1|LOVHK_BRUO2 Blue-light-activated histidine kinase OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=BOV_A0554 PE=3 SV=2
Length = 489
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 6 VLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALES 65
++ N +P PIV+ + F +L+G+ ++M G C+FL G T H I+ A+ +
Sbjct: 35 LITNPHLPD-NPIVFANPAFLKLTGYEADEVM--GRNCRFLQGHGTDPAHVCAIKSAIAA 91
Query: 66 KTELKLEVIFYKKNG 80
+ + +++I YKK+G
Sbjct: 92 EKPIDIDIINYKKSG 106
>sp|Q8FW73|LOVHK_BRUSU Blue-light-activated histidine kinase OS=Brucella suis biovar 1
(strain 1330) GN=BRA0588 PE=3 SV=2
Length = 489
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 6 VLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALES 65
++ N +P PIV+ + F +L+G+ ++M G C+FL G T H I+ A+ +
Sbjct: 35 LITNPHLPD-NPIVFANPAFLKLTGYEADEVM--GRNCRFLQGHGTDPAHVRAIKSAIAA 91
Query: 66 KTELKLEVIFYKKNG 80
+ + +++I YKK+G
Sbjct: 92 EKPIDIDIINYKKSG 106
>sp|A9WYQ7|LOVHK_BRUSI Blue-light-activated histidine kinase OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=BSUIS_B0585 PE=3 SV=2
Length = 489
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 6 VLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALES 65
++ N +P PIV+ + F +L+G+ ++M G C+FL G T H I+ A+ +
Sbjct: 35 LITNPHLPD-NPIVFANPAFLKLTGYEADEVM--GRNCRFLQGHGTDPAHVRAIKSAIAA 91
Query: 66 KTELKLEVIFYKKNG 80
+ + +++I YKK+G
Sbjct: 92 EKPIDIDIINYKKSG 106
>sp|Q8YC53|LOVHK_BRUME Blue-light-activated histidine kinase OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
GN=BMEII0679 PE=1 SV=1
Length = 489
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 6 VLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALES 65
++ N +P PIV+ + F +L+G+ ++M G C+FL G T H I+ A+ +
Sbjct: 35 LITNPHLPD-NPIVFANPAFLKLTGYEADEVM--GRNCRFLQGHGTDPAHVRAIKSAIAA 91
Query: 66 KTELKLEVIFYKKNG 80
+ + +++I YKK+G
Sbjct: 92 EKPIDIDIINYKKSG 106
>sp|A9MBM8|LOVHK_BRUC2 Blue-light-activated histidine kinase OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=BCAN_B0589 PE=3 SV=2
Length = 489
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 6 VLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALES 65
++ N +P PIV+ + F +L+G+ ++M G C+FL G T H I+ A+ +
Sbjct: 35 LITNPHLPD-NPIVFANPAFLKLTGYEADEVM--GRNCRFLQGHGTDPAHVRAIKSAIAA 91
Query: 66 KTELKLEVIFYKKNG 80
+ + +++I YKK+G
Sbjct: 92 EKPIDIDIINYKKSG 106
>sp|Q577Y7|LOVHK_BRUAB Blue-light-activated histidine kinase OS=Brucella abortus biovar 1
(strain 9-941) GN=BruAb2_0636 PE=3 SV=2
Length = 489
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 6 VLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALES 65
++ N +P PIV+ + F +L+G+ ++M G C+FL G T H I+ A+ +
Sbjct: 35 LITNPHLPD-NPIVFANPAFLKLTGYEADEVM--GRNCRFLQGHGTDPAHVRAIKSAIAA 91
Query: 66 KTELKLEVIFYKKNG 80
+ + +++I YKK+G
Sbjct: 92 EKPIDIDIINYKKSG 106
>sp|Q2YKK7|LOVHK_BRUA2 Blue-light-activated histidine kinase OS=Brucella abortus (strain
2308) GN=BAB2_0652 PE=1 SV=2
Length = 489
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 6 VLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALES 65
++ N +P PIV+ + F +L+G+ ++M G C+FL G T H I+ A+ +
Sbjct: 35 LITNPHLPD-NPIVFANPAFLKLTGYEADEVM--GRNCRFLQGHGTDPAHVRAIKSAIAA 91
Query: 66 KTELKLEVIFYKKNG 80
+ + +++I YKK+G
Sbjct: 92 EKPIDIDIINYKKSG 106
>sp|Q01371|WC1_NEUCR White collar 1 protein OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-1
PE=2 SV=2
Length = 1167
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 17 PIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQ-----------IEKALES 65
PI+Y SD F L+G++R +I+ G C+FL PD + E T+ ++K +
Sbjct: 404 PIIYVSDNFQNLTGYSRHEIV--GRNCRFLQAPDGNVEAGTKREFVENNAVYTLKKTIAE 461
Query: 66 KTELKLEVIFYKKNG 80
E++ +I Y+K G
Sbjct: 462 GQEIQQSLINYRKGG 476
>sp|Q92DM1|PHOT_LISIN Blue-light photoreceptor OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=lin0792 PE=3 SV=1
Length = 253
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 17 PIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALESKTELKLEVIFY 76
PI++ + GF ++G+ + + + G C FL G DT +E +I A+ K+ + + Y
Sbjct: 32 PIIFVNTGFENITGYTKEEAI--GSNCHFLQGDDTDKEEVAKIRHAINEKSTANVLLKNY 89
Query: 77 KKNG 80
+KNG
Sbjct: 90 RKNG 93
>sp|P58724|PHOT_LISMO Blue-light photoreceptor OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=lmo0799 PE=3 SV=1
Length = 253
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 17 PIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALESKTELKLEVIFY 76
PI++ + GF ++G+A+ + + G C FL G DT +E +I A+ K+ + + Y
Sbjct: 32 PIIFVNTGFENITGYAKEEAL--GSNCHFLQGDDTDKEEVAKIRHAINEKSTANVLLKNY 89
Query: 77 KKNG 80
+K+G
Sbjct: 90 RKDG 93
>sp|O64511|TLOV1_ARATH Protein TWIN LOV 1 OS=Arabidopsis thaliana GN=TLP1 PE=1 SV=2
Length = 399
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 1 MNSNFVLGNAQVPSLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIE 60
+ +FVL N +P + PI+Y SD F L+G+ R +++ G C+FL G DT +++
Sbjct: 257 IKQSFVLTNPCLPDM-PIIYASDAFLTLTGYKRQEVL--GQNCRFLSGVDTDSSVLYEMK 313
Query: 61 KALESKTELKLEVIFY 76
+ + ++++ Y
Sbjct: 314 ECILKGQSCTVQILNY 329
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 14 SLYPIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHKTQIEKALESKTELKLEV 73
S +PIV+ S GF +++G++R +++ G K GP T+ +I +A+ + +++ +
Sbjct: 47 SGHPIVFASLGFLKMTGYSREEVI--GRNGKVFQGPKTNRRSIMEIREAIREERSVQVSL 104
Query: 74 IFYKKNG 80
+ Y+K+G
Sbjct: 105 LNYRKSG 111
>sp|Q5Z8K3|ADO1_ORYSJ Adagio-like protein 1 OS=Oryza sativa subsp. japonica
GN=Os06g0694000 PE=2 SV=1
Length = 630
Score = 36.2 bits (82), Expect = 0.064, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 17 PIVYCSDGFCELSGFARAQIMQKGCACKFLYGPDTSEEHK-------TQIEKALESKTEL 69
PI+Y + GF E +G+ +++ + C GP H ++I K +++ TE
Sbjct: 71 PIIYVNCGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAMVVSEIRKCIDNGTEF 130
Query: 70 KLEVIFYKKNG 80
+ +++ ++K+G
Sbjct: 131 RGDLLNFRKDG 141
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,700,410
Number of Sequences: 539616
Number of extensions: 1669634
Number of successful extensions: 51802
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 218
Number of HSP's that attempted gapping in prelim test: 34325
Number of HSP's gapped (non-prelim): 10056
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)