Your job contains 1 sequence.
>psy8550
SQPTRKYVKRKVQGQLDEIFWIDILDVTYILYKLHPGFQNNPKSNFKSPTEILKSLLIIP
FEVRILNKLRIFINDSVLFSSVSDITMWSLLVTTALLLLVHQASAFCPPDCDCNDETLVV
TCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFE
PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ
NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN
GLGRLSALDLRGAGLTNMMGHSMALGDYLHWI
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8550
(332 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0023095 - symbol:caps "capricious" species:7227 "D... 591 1.7e-57 1
FB|FBgn0010452 - symbol:trn "tartan" species:7227 "Drosop... 589 2.8e-57 1
FB|FBgn0085397 - symbol:Fili "Fish-lips" species:7227 "Dr... 324 3.1e-28 1
ZFIN|ZDB-GENE-091214-3 - symbol:lingo4b "leucine rich rep... 258 2.6e-21 1
UNIPROTKB|F1P2C4 - symbol:LRRC4C "Uncharacterized protein... 249 7.7e-21 1
UNIPROTKB|F1NTY3 - symbol:LRRC4C "Uncharacterized protein... 249 1.9e-20 1
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 249 2.4e-20 1
MGI|MGI:107973 - symbol:Igfals "insulin-like growth facto... 248 3.1e-20 1
MGI|MGI:2444651 - symbol:Lingo4 "leucine rich repeat and ... 246 4.9e-20 1
UNIPROTKB|F1SHH6 - symbol:LRRC4C "Uncharacterized protein... 246 5.8e-20 1
UNIPROTKB|Q86UN3 - symbol:RTN4RL2 "Reticulon-4 receptor-l... 241 6.0e-20 1
ZFIN|ZDB-GENE-080327-16 - symbol:lingo1a "leucine rich re... 245 6.9e-20 1
UNIPROTKB|E2REC5 - symbol:LRRC4C "Uncharacterized protein... 245 7.4e-20 1
UNIPROTKB|Q9HCJ2 - symbol:LRRC4C "Leucine-rich repeat-con... 245 7.4e-20 1
MGI|MGI:2442636 - symbol:Lrrc4c "leucine rich repeat cont... 245 7.4e-20 1
RGD|1311013 - symbol:Lrrc4c "leucine rich repeat containi... 245 7.4e-20 1
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 244 8.5e-20 1
UNIPROTKB|F1MXH5 - symbol:LRRC4C "Uncharacterized protein... 244 9.5e-20 1
ZFIN|ZDB-GENE-091116-44 - symbol:lrrc4bb "leucine rich re... 245 9.9e-20 1
ZFIN|ZDB-GENE-050522-533 - symbol:lrrc4c "leucine rich re... 243 1.2e-19 1
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 241 1.8e-19 1
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 241 1.8e-19 1
UNIPROTKB|Q50LG9 - symbol:LRRC24 "Leucine-rich repeat-con... 239 2.0e-19 1
ZFIN|ZDB-GENE-080327-5 - symbol:sc:d0316 "sc:d0316" speci... 240 2.5e-19 1
WB|WBGene00022129 - symbol:lron-11 species:6239 "Caenorha... 238 2.9e-19 1
ZFIN|ZDB-GENE-040724-113 - symbol:si:ch211-191d15.2 "si:c... 229 4.0e-19 1
UNIPROTKB|Q9BXB1 - symbol:LGR4 "Leucine-rich repeat-conta... 240 5.1e-19 1
UNIPROTKB|F1MLX5 - symbol:LGR4 "Uncharacterized protein" ... 239 7.4e-19 1
RGD|628615 - symbol:Lgr4 "leucine-rich repeat-containing ... 238 8.4e-19 1
UNIPROTKB|Q9Z2H4 - symbol:Lgr4 "Leucine-rich repeat-conta... 238 8.4e-19 1
MGI|MGI:1891468 - symbol:Lgr4 "leucine-rich repeat-contai... 236 1.4e-18 1
UNIPROTKB|Q6UY18 - symbol:LINGO4 "Leucine-rich repeat and... 235 1.5e-18 1
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 235 1.6e-18 1
ZFIN|ZDB-GENE-041210-129 - symbol:lrrc4.1 "leucine rich r... 235 3.0e-18 1
UNIPROTKB|F1P9F0 - symbol:LGR4 "Uncharacterized protein" ... 235 3.2e-18 1
MGI|MGI:2669796 - symbol:Rtn4rl2 "reticulon 4 receptor-li... 232 3.6e-18 1
RGD|727797 - symbol:Rtn4rl2 "reticulon 4 receptor-like 2"... 231 5.5e-18 1
ZFIN|ZDB-GENE-080327-15 - symbol:lrrtm4l1 "leucine rich r... 232 8.8e-18 1
MGI|MGI:3605040 - symbol:Lrrc24 "leucine rich repeat cont... 231 1.1e-17 1
UNIPROTKB|F1MUR6 - symbol:RTN4RL2 "Uncharacterized protei... 228 1.8e-17 1
FB|FBgn0033250 - symbol:CG14762 species:7227 "Drosophila ... 229 1.9e-17 1
ZFIN|ZDB-GENE-061103-397 - symbol:zgc:153913 "zgc:153913"... 229 2.2e-17 1
UNIPROTKB|F1NEL3 - symbol:LGR4 "Uncharacterized protein" ... 232 2.5e-17 1
UNIPROTKB|A6H701 - symbol:LRRTM2 "Uncharacterized protein... 228 3.5e-17 1
UNIPROTKB|O43300 - symbol:LRRTM2 "Leucine-rich repeat tra... 228 3.5e-17 1
UNIPROTKB|Q50L44 - symbol:LINGO1 "Leucine-rich repeat and... 229 3.6e-17 1
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 228 4.9e-17 1
RGD|1307733 - symbol:Lgr5 "leucine rich repeat containing... 230 5.0e-17 1
UNIPROTKB|F1SRC2 - symbol:CHADL "Uncharacterized protein"... 228 7.5e-17 1
UNIPROTKB|F1MT22 - symbol:LGR5 "Uncharacterized protein" ... 227 1.5e-16 1
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 224 1.9e-16 1
UNIPROTKB|F1SGM5 - symbol:LGR4 "Uncharacterized protein" ... 226 2.0e-16 1
UNIPROTKB|Q7L985 - symbol:LINGO2 "Leucine-rich repeat and... 224 2.1e-16 1
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 223 2.6e-16 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 226 2.7e-16 1
RGD|1593785 - symbol:Lrrtm2 "leucine rich repeat transmem... 222 2.8e-16 1
MGI|MGI:2389174 - symbol:Lrrtm2 "leucine rich repeat tran... 222 2.8e-16 1
UNIPROTKB|F1NWG8 - symbol:F1NWG8 "Uncharacterized protein... 222 2.9e-16 1
ZFIN|ZDB-GENE-080327-25 - symbol:lrrc4ba "leucine rich re... 224 2.9e-16 1
MGI|MGI:1341817 - symbol:Lgr5 "leucine rich repeat contai... 225 3.1e-16 1
MGI|MGI:3027390 - symbol:Lrrc4b "leucine rich repeat cont... 223 3.8e-16 1
RGD|1307121 - symbol:Lrrc4b "leucine rich repeat containi... 223 3.8e-16 1
MGI|MGI:2443718 - symbol:Lrig2 "leucine-rich repeats and ... 225 3.8e-16 1
UNIPROTKB|E1BPK8 - symbol:LRRC4B "Uncharacterized protein... 222 5.4e-16 1
UNIPROTKB|Q9NT99 - symbol:LRRC4B "Leucine-rich repeat-con... 222 5.4e-16 1
UNIPROTKB|F1PZW2 - symbol:LRRC4B "Uncharacterized protein... 222 5.5e-16 1
UNIPROTKB|I3LJI7 - symbol:LRRC4B "Uncharacterized protein... 222 5.5e-16 1
UNIPROTKB|E1C0J7 - symbol:PXDNL "Uncharacterized protein"... 225 5.6e-16 1
UNIPROTKB|E1C0J1 - symbol:PXDNL "Uncharacterized protein"... 225 5.7e-16 1
MGI|MGI:2141485 - symbol:Lrtm2 "leucine-rich repeats and ... 216 6.2e-16 1
MGI|MGI:2441805 - symbol:Lgr6 "leucine-rich repeat-contai... 222 8.8e-16 1
MGI|MGI:2389180 - symbol:Lrrtm4 "leucine rich repeat tran... 219 9.7e-16 1
RGD|1560707 - symbol:Lrrtm4 "leucine rich repeat transmem... 219 9.7e-16 1
UNIPROTKB|F1PGX0 - symbol:LINGO1 "Uncharacterized protein... 219 1.1e-15 1
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 223 1.1e-15 1
UNIPROTKB|E1C7Z9 - symbol:E1C7Z9 "Uncharacterized protein... 220 1.2e-15 1
UNIPROTKB|Q86VH4 - symbol:LRRTM4 "Leucine-rich repeat tra... 218 1.3e-15 1
MGI|MGI:2442298 - symbol:Lingo2 "leucine rich repeat and ... 218 1.4e-15 1
UNIPROTKB|F1NJ43 - symbol:NYX "Uncharacterized protein" s... 216 1.4e-15 1
ZFIN|ZDB-GENE-031113-8 - symbol:lrrc15 "leucine rich repe... 217 1.6e-15 1
UNIPROTKB|F1S5B4 - symbol:LGR6 "Uncharacterized protein" ... 220 1.6e-15 1
UNIPROTKB|O75325 - symbol:LRRN2 "Leucine-rich repeat neur... 218 1.8e-15 1
UNIPROTKB|F1MBT2 - symbol:LINGO1 "Uncharacterized protein... 217 1.9e-15 1
MGI|MGI:1915522 - symbol:Lingo1 "leucine rich repeat and ... 217 1.9e-15 1
UNIPROTKB|Q96FE5 - symbol:LINGO1 "Leucine-rich repeat and... 217 1.9e-15 1
UNIPROTKB|F1SJ87 - symbol:LINGO1 "Uncharacterized protein... 217 1.9e-15 1
UNIPROTKB|G3V881 - symbol:Lingo1 "Leucine rich repeat neu... 217 1.9e-15 1
UNIPROTKB|Q9BZR6 - symbol:RTN4R "Reticulon-4 receptor" sp... 214 2.5e-15 1
UNIPROTKB|F1S7K2 - symbol:LRG1 "Uncharacterized protein" ... 210 2.8e-15 1
RGD|1560339 - symbol:Lgr6 "leucine-rich repeat-containing... 218 2.9e-15 1
ZFIN|ZDB-GENE-040912-136 - symbol:lingo1b "leucine rich r... 215 3.5e-15 1
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 218 3.6e-15 1
UNIPROTKB|G3X6G8 - symbol:LGR6 "Uncharacterized protein" ... 217 3.8e-15 1
ZFIN|ZDB-GENE-080723-57 - symbol:lingo2 "leucine rich rep... 214 4.4e-15 1
FB|FBgn0034083 - symbol:lbk "lambik" species:7227 "Drosop... 217 5.6e-15 1
MGI|MGI:3609246 - symbol:Lingo3 "leucine rich repeat and ... 213 5.7e-15 1
MGI|MGI:2145995 - symbol:Amigo2 "adhesion molecule with I... 212 5.8e-15 1
UNIPROTKB|O94898 - symbol:LRIG2 "Leucine-rich repeats and... 216 6.2e-15 1
UNIPROTKB|Q8N967 - symbol:LRTM2 "Leucine-rich repeat and ... 208 6.9e-15 1
RGD|2724 - symbol:Gp5 "glycoprotein V (platelet)" species... 212 7.0e-15 1
WARNING: Descriptions of 930 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 118/220 (53%), Positives = 155/220 (70%)
Query: 105 AFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV 164
A CP C+C+D+TL+V C E LDV+PI LNP+IQRLV+K N++KT+DS++QFY+ L +
Sbjct: 41 ANCPNGCECDDDTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLKTIDSSMQFYAQLTFL 100
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS N ++ IP R F KL EL L+HNK+ V+NKTF+GL ++ VLNLRGN + +L
Sbjct: 101 DLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEY 160
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP-SFIYLGMLAE 283
R F+P+ L EL+LGQNRIS ID +GL LR+LYLDDN L +VP +F L LAE
Sbjct: 161 RTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAE 220
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
L +G N F T+ GAF L L+ LDLRGAGL N+ G ++
Sbjct: 221 LYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDAL 260
Score = 207 (77.9 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 55/154 (35%), Positives = 80/154 (51%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK-TFIGLKSLKVLNLRGNFL 219
L ++L N++ +I + + L L L+ N L++V + TF L SL L L N
Sbjct: 169 LAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSF 228
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+P F L L LDL + I +GL +LR L L DN+L ++PT +F LG
Sbjct: 229 MTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLG 288
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L +L +G N F ++ GAF+GL L L+L GA
Sbjct: 289 RLEQLNIGQNDFEVISSGAFSGLRELRHLELTGA 322
Score = 173 (66.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 58/186 (31%), Positives = 86/186 (46%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
+++ L L N + TV + F + SL + L N + IP F+ + L L L
Sbjct: 192 NLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAG 251
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L +++ GL SL+ L+L N L +P F L LE+L++GQN I F GL
Sbjct: 252 LHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGL 311
Query: 255 TALRILYLDDNQ-LRSVPTPSFIYLGMLAELRVGLNV-FTTLADGAFNGLGRLSALDLRG 312
LR L L Q LR V + +F L L + N L+ A GL LS + L+
Sbjct: 312 RELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKA 371
Query: 313 AGLTNM 318
L+++
Sbjct: 372 NQLSSL 377
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 120/223 (53%), Positives = 154/223 (69%)
Query: 105 AFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV 164
A CPP C C+D TLVV C E LDV+PI LNPSIQRLV+K N+IKT+DS+IQFY+ L +
Sbjct: 28 ANCPPGCQCDDNTLVVQCGEGQLDVLPIALNPSIQRLVIKSNKIKTIDSSIQFYAELTFL 87
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS N L+ IP R F Q+KL E+ LNHNK+ ++NKTFIGL ++ VLNLRGN + +L
Sbjct: 88 DLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELHQ 147
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS-FIYLGMLAE 283
F PL +EEL+LG+NRI +D F+GL+ LRILYLDDN L +VP P F + LAE
Sbjct: 148 GTFTPLLKIEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAE 207
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG 326
L +G+N ++ AF L L+ L+L+GA L N+ H LG
Sbjct: 208 LFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNI-SHDSFLG 249
Score = 193 (73.0 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 56/182 (30%), Positives = 95/182 (52%)
Query: 141 LVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
L L N + TV + F + SL + L N L +I F+ + L L+L L ++
Sbjct: 183 LYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNI 242
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
++ +F+GL+ L++L+L N L+ +P + L LE+L LGQN I + F GL L+
Sbjct: 243 SHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLK 302
Query: 259 ILYLDDN-QLRSVPTPSFIYLGMLAELRVGLN-VFTTLADGAFNGLGRLSALDLRGAGLT 316
L ++ +L+ V T +F G L L + N + + +GA +GL +L + L+ LT
Sbjct: 303 RLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALT 362
Query: 317 NM 318
++
Sbjct: 363 SL 364
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 49/154 (31%), Positives = 79/154 (51%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKT-FIGLKSLKVLNLRGNFL 219
++ ++L N++ + + F+ +L L L+ N L++V + F + SL L L N L
Sbjct: 156 IEELNLGENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTL 215
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+ + F L L L+L + I F GL LRIL L DN+L +P+ L
Sbjct: 216 QSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLV 275
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L +L +G N F +++GAF GL +L L++ GA
Sbjct: 276 RLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGA 309
Score = 127 (49.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L N ++++ + A Q L ++L L NI F ++L L L+ N+
Sbjct: 203 PSLAELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNR 262
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDL-GQNRISRIDQACFEG 253
L + + L L+ L+L N E + + F L L+ L++ G R+ R+ F
Sbjct: 263 LDRIPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSD 322
Query: 254 LTALRILYLDDNQ-LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L L N+ L V + L L + + N T+LA+G F L LDL
Sbjct: 323 NGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWKD-LQTLDL 379
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 324 (119.1 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 72/213 (33%), Positives = 118/213 (55%)
Query: 102 QASAFCPPDCDC--NDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS 159
+ +AFCP C C + C +A L+ +PI LNP + + L NRI+T++ ++ FY
Sbjct: 37 ETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNRIRTLEFSLPFYM 96
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
L+ +DLS N + + + FE Q +L L L+ N +SS++ F GL +L +L+L N +
Sbjct: 97 KLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRI 156
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
E + + L+ L ELDL N I ++ CF+G+ L +L +N+L VP + +L
Sbjct: 157 ETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLH 216
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L L + LN+ + + +F GL L AL ++G
Sbjct: 217 ALKSLDMSLNLVEFVRNDSFEGLKELLALSVQG 249
Score = 196 (74.1 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 59/171 (34%), Positives = 87/171 (50%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +NRI+TV +A+ +SL +DL++N +V++ F+ L L +N+L V
Sbjct: 149 LDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVP 208
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
L +LK L++ N +E + + F L L L + N +S +D + FEGL +L+
Sbjct: 209 ASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKH 268
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L DN L VPT L L L +G N F+ L AF L L L L
Sbjct: 269 LDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHL 319
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 56/180 (31%), Positives = 86/180 (47%)
Query: 138 IQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N I+T+ S ++ S L+ ++LS N + ++ F+ L+ L L+ N++
Sbjct: 98 LEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIE 157
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+V+ L SL L+L N + L D F ++ LE L NR+ + + L A
Sbjct: 158 TVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHA 217
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L+ L + N + V SF L L L V NV + L AF GL L LDL LT
Sbjct: 218 LKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLT 277
Score = 154 (59.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N + ++ A + ++L +DLS N++ + LVEL L +N +
Sbjct: 122 LRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIV 181
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
S+ + F G+ +L+VL R N L D+P L L+ LD+ N + + FEGL
Sbjct: 182 SLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKE 241
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L L + N + + +F L L L + N T + + L L+ L+L G
Sbjct: 242 LLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGG 297
Score = 148 (57.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 42/148 (28%), Positives = 73/148 (49%)
Query: 171 LVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPL 230
L ++PI+ P+ K + L +N + + ++ L++L+L N +E L + F
Sbjct: 64 LEDVPIQ-LNPETKYINLTVNRIRTLEFSLPFYM---KLEILDLSQNIIETLGSKNFEYQ 119
Query: 231 SHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 290
S L L+L +N +S + + F+GLT L +L L N++ +V + L L EL + N
Sbjct: 120 SELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNN 179
Query: 291 FTTLADGAFNGLGRLSALDLRGAGLTNM 318
+L D F G+ L L R L ++
Sbjct: 180 IVSLEDNCFKGMNTLEVLVFRNNRLLDV 207
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 47/166 (28%), Positives = 76/166 (45%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L + N ++ V + + + L + + N + + + FE L L L+ N L
Sbjct: 217 ALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNL 276
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ-NRISRIDQACFEGL 254
+ V + L +L LNL GN LP F L HL EL L + + + RID F
Sbjct: 277 TMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDN 336
Query: 255 TALRILYLDDN-QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 299
T L+ L+L++N QL +P F + E+ + N TL F
Sbjct: 337 THLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQF 382
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 258 (95.9 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 68/222 (30%), Positives = 114/222 (51%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C+ + L V C +L +P L + +RL L N++KT+ + QF S L+ +
Sbjct: 29 CPQRCSCSRDPLEVNCSSRHLTAVPEGLPTNAKRLDLSGNQLKTL-ARRQFSSLSKLEDL 87
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS N + I + F+ + L L++ +N+L + F GL +L+ L++ N + D
Sbjct: 88 DLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDISENEILVFLD 147
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
F + +L++LD G+N + I Q F GL AL+ L +D + L S+PT + L L +L
Sbjct: 148 YTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKL 207
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG 326
R+ + L + AF L +L L + M+ + +G
Sbjct: 208 RLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVG 249
Score = 193 (73.0 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/179 (30%), Positives = 90/179 (50%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
++ + +DLS NQL + R F KL +L L+ N +S + +TF GLK+L+ L ++ N
Sbjct: 58 TNAKRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNR 117
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L+ LP +F+ LS+L LD+ +N I F + L+ L +N L + +F+ L
Sbjct: 118 LKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGL 177
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMG------HSMALGDYLHW 331
L EL V + T++ A + L L+ L LR ++ + H + LHW
Sbjct: 178 QALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHW 236
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 54/198 (27%), Positives = 87/198 (43%)
Query: 123 KEANLDVIPITLNP---SIQRLVLKYNRIKT-VDSAIQFYSSLQHVDLSHNQLVNIPIRG 178
K L ++P+ + +++RL + N I +D + +LQ +D N LV I R
Sbjct: 114 KNNRLKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRA 173
Query: 179 FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELD- 237
F + L EL ++ + L+S+ + L+SL L LR + LP+ F L L L
Sbjct: 174 FVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQI 233
Query: 238 LGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 297
L + + ++ GL L L L + L ++P +L L L + N T++
Sbjct: 234 LHWSSLEMLNSNSLVGLN-LTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGN 292
Query: 298 AFNGLGRLSALDLRGAGL 315
L RL L L G L
Sbjct: 293 LLGDLLRLQELHLVGGNL 310
Score = 125 (49.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 45/158 (28%), Positives = 70/158 (44%)
Query: 154 AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH-NKLSSVNNKTFIGLKSLKVL 212
A+ SL + L + +P F +L LQ+ H + L +N+ + +GL +L L
Sbjct: 197 ALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVGL-NLTTL 255
Query: 213 NLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 272
L L +P L++L+ LDL N I+ I L L+ L+L L +
Sbjct: 256 VLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLRLQELHLVGGNLLQIEP 315
Query: 273 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+F L L V N +TL + AF+ +G L L L
Sbjct: 316 GAFRGLSRFRLLNVSSNRLSTLEESAFHSVGNLQTLRL 353
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 249 (92.7 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 69/206 (33%), Positives = 104/206 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C NL +P ++ + + L L N+I+ + + + L+H++
Sbjct: 24 CPSVCSCSNQFSKVICVRKNLRDVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEI 81
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I I F L L+L N+L+++ N F+ L LK L LR N +E +P
Sbjct: 82 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 141
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+S I + FEGL+ LR L L LR +P + L L
Sbjct: 142 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLVKLD 199
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N T + G+F GL L L
Sbjct: 200 ELDLSGNHLTAIRPGSFQGLMHLQKL 225
Score = 177 (67.4 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 55/176 (31%), Positives = 88/176 (50%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
++ L L NR+ T+ + A + S L+ + L +N + +IP F L L L K
Sbjct: 102 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR 161
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS ++ F GL +L+ LNL L ++P+ PL L+ELDL N ++ I F+GL
Sbjct: 162 LSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLTAIRPGSFQGL 219
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ +Q++ + +F L L E+ + N T L F L RL + L
Sbjct: 220 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL-RLERIHL 274
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 47/165 (28%), Positives = 81/165 (49%)
Query: 147 RIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGL 206
R +T S + V L ++P G +L+ L N ++ VN+ F L
Sbjct: 20 RAQTCPSVCSCSNQFSKVICVRKNLRDVP-DGISTNTRLLNLHENQIQIIKVNS--FKHL 76
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
+ L++L L N + + F L++L L+L NR++ I F L+ L+ L+L +N
Sbjct: 77 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNP 136
Query: 267 LRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDL 310
+ S+P+ +F + L L +G L + +++GAF GL L L+L
Sbjct: 137 IESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 181
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 109 PDCDCNDETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHV 164
PD + T ++ E + +I + ++ L L N I+T++ A ++L +
Sbjct: 48 PD-GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 106
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF--LEDL 222
+L N+L IP F KL EL L +N + S+ + F + SL+ L+L G L +
Sbjct: 107 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL-GELKRLSYI 165
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F LS+L L+L + I L L L L N L ++ SF L L
Sbjct: 166 SEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLTAIRPGSFQGLMHLQ 223
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+L + + + AF+ L L ++L LT ++ H +
Sbjct: 224 KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 263
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 249 (92.7 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 69/206 (33%), Positives = 104/206 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C NL +P ++ + + L L N+I+ + + + L+H++
Sbjct: 15 CPSVCSCSNQFSKVICVRKNLRDVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEI 72
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I I F L L+L N+L+++ N F+ L LK L LR N +E +P
Sbjct: 73 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 132
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+S I + FEGL+ LR L L LR +P + L L
Sbjct: 133 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLVKLD 190
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N T + G+F GL L L
Sbjct: 191 ELDLSGNHLTAIRPGSFQGLMHLQKL 216
Score = 177 (67.4 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 55/176 (31%), Positives = 88/176 (50%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
++ L L NR+ T+ + A + S L+ + L +N + +IP F L L L K
Sbjct: 93 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR 152
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS ++ F GL +L+ LNL L ++P+ PL L+ELDL N ++ I F+GL
Sbjct: 153 LSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLTAIRPGSFQGL 210
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ +Q++ + +F L L E+ + N T L F L RL + L
Sbjct: 211 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL-RLERIHL 265
Score = 156 (60.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 210 KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS 269
++LNL N ++ + F L HLE L L +N I I+ F GL L L L DN+L +
Sbjct: 47 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 106
Query: 270 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+P +F+YL L EL + N ++ AFN + L LDL
Sbjct: 107 IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 147
Score = 134 (52.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 47/154 (30%), Positives = 71/154 (46%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
++L NQ+ I + F+ L LQL+ N + ++ F GL +L L L N L +P
Sbjct: 49 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIP 108
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDD-NQLRSVPTPSFIYLGMLA 282
+ F LS L+EL L N I I F + +LR L L + +L + +F L L
Sbjct: 109 NGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLR 168
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L + + + + L +L LDL G LT
Sbjct: 169 YLNLAMCNLREIPN--LTPLVKLDELDLSGNHLT 200
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 249 (92.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 64/188 (34%), Positives = 102/188 (54%)
Query: 138 IQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N +K + I LQ + L++NQ+ I R F + L L L+HN+L+
Sbjct: 215 LKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLT 274
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
S+ TF+GL SL VL L N + L R F L LEEL LG NRI + + F+GL
Sbjct: 275 SLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQ 334
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L +L L++NQL+ + +F+ L +A + + N TL + F G+ +L +L L + L+
Sbjct: 335 LEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLS 394
Query: 317 NMMGHSMA 324
+ ++ +
Sbjct: 395 KIRANTFS 402
Score = 213 (80.0 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 58/183 (31%), Positives = 98/183 (53%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L +NR+ ++ + SL + LS N + ++ R F+ + L ELQL HN++
Sbjct: 262 SLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRI 321
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S+ +TF GL L+VL+L N L+D+ F L ++ + L N I + + FEG+T
Sbjct: 322 WSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVT 381
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L+L+ + L + +F L L L + N +T+ D +F L L LDL+ L
Sbjct: 382 KLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRL 441
Query: 316 TNM 318
+++
Sbjct: 442 SHL 444
Score = 210 (79.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 61/179 (34%), Positives = 88/179 (49%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ +++ V+ A SL H+ L N+L + F + LV L LN+N S V
Sbjct: 98 LDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVE 157
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F GL +L LNL N L LPD++F L +L EL L N++ + F LT L+
Sbjct: 158 EGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKE 217
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L N L+ + F+ L L +L + N +A AF G+ L LDL LT++
Sbjct: 218 LDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSL 276
Score = 196 (74.1 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 57/177 (32%), Positives = 93/177 (52%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
P+++ L+L N++ + + F S L+ +DLS N L I I F +KL +L LN+N
Sbjct: 189 PNLRELILAGNKLPYLQHQL-FCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNN 247
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+++++ + F+G+KSL+ L+L N L L + F L L L L N I+ + F+
Sbjct: 248 QINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKD 307
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L L L N++ S+ +F LG L L + N + GAF GL ++ + L
Sbjct: 308 LQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHL 364
Score = 192 (72.6 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 58/171 (33%), Positives = 85/171 (49%)
Query: 141 LVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N V+ + S+L +++L N LV +P + F L EL L NKL +
Sbjct: 146 LSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQ 205
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
++ F L LK L+L GN L+ + +F L L++L L N+I+ I F G+ +LR
Sbjct: 206 HQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRW 265
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L N+L S+ +F+ L L LR+ N T+L F L L L L
Sbjct: 266 LDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQL 316
Score = 192 (72.6 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 94/189 (49%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N + + D +L+ + L+ N+L + + F +L EL L+ N L +
Sbjct: 170 LNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIK 229
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F+ L+ L+ L L N + + R F + L LDL NR++ + + F GL +L +
Sbjct: 230 INIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHV 289
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L N + S+ +F L L EL++G N +LA+ F+GLG+L L L L ++
Sbjct: 290 LRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIK 349
Query: 320 GHSMALGDY 328
+ LG Y
Sbjct: 350 AGAF-LGLY 357
Score = 191 (72.3 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 51/156 (32%), Positives = 83/156 (53%)
Query: 155 IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNL 214
+QF LQ L HN++ ++ R F+ +L L LN+N+L + F+GL ++ V++L
Sbjct: 308 LQFLEELQ---LGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHL 364
Query: 215 RGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 274
N ++ LP+ +F ++ L L L + +S+I F LT+LR L+L N + ++ S
Sbjct: 365 SANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQS 424
Query: 275 FIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
F L L EL + N + L+ F GL L L L
Sbjct: 425 FRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFL 460
Score = 191 (72.3 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 58/181 (32%), Positives = 87/181 (48%)
Query: 138 IQRLVLKYNRIKTVDSA--IQFYS-SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
++ L L N+++ + + + Y+ ++ H LS N + +P FE KL L L H+
Sbjct: 335 LEVLSLNNNQLQDIKAGAFLGLYNVAVMH--LSANCIKTLPEYVFEGVTKLHSLHLEHSC 392
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS + TF L SL+ L L+ N + + D+ F L L ELDL NR+S + F GL
Sbjct: 393 LSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGL 452
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
+ L L+L NQ+ + +F L L L + N TL + L L L LR
Sbjct: 453 SNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNS 512
Query: 315 L 315
L
Sbjct: 513 L 513
Score = 180 (68.4 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 65/232 (28%), Positives = 97/232 (41%)
Query: 107 CPPDCDCN----DETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSL 161
CP C C+ E L V C NL +P + + + L N + +A + S L
Sbjct: 36 CPSPCACSLDDYSEELNVFCSGRNLTQLPDDFPTNAKAIWLDGNNFTQLPAAAFRNLSGL 95
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+DL +QL + F L L L N+L + TF+ ++L L+L N
Sbjct: 96 DFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSK 155
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+ + LFA LS+L L+LG N + + F L LR L L N+L + F L L
Sbjct: 156 VEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTEL 215
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG-DYLHWI 332
EL + N + F L +L L L + N + +G L W+
Sbjct: 216 KELDLSGNALKGIKINIFVKLQKLQKLYLNNNQI-NAIAPRAFMGMKSLRWL 266
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 40/111 (36%), Positives = 63/111 (56%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+SL+ + L HN + I + F +L+EL L HN+LS ++ + F+GL +L+ L L N
Sbjct: 405 TSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQ 464
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS 269
+ D+ F+PL L LDL N+++ +D A L LR L L +N L +
Sbjct: 465 IMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNSLET 515
Score = 171 (65.3 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 60/184 (32%), Positives = 91/184 (49%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLS-HNQLVNIPIRG-FEPQEKLVELQLNHNK 194
S+ L L+ NR+K + + F + V LS +N L + G F L L L N
Sbjct: 118 SLYHLHLERNRLKYL-APHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNS 176
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L + +K F L +L+ L L GN L L +LF L+ L+ELDL N + I F L
Sbjct: 177 LVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKL 236
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L+ LYL++NQ+ ++ +F+ + L L + N T+L + F GL L L L
Sbjct: 237 QKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNS 296
Query: 315 LTNM 318
+T++
Sbjct: 297 ITSL 300
Score = 170 (64.9 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+Q+L L N+I + A SL+ +DLSHN+L ++ F L L+L+ N ++
Sbjct: 239 LQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSIT 298
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
S+ +TF L+ L+ L L N + L +R F L LE L L N++ I F GL
Sbjct: 299 SLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYN 358
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
+ +++L N ++++P F + L L + + + + F+ L L L L+ ++
Sbjct: 359 VAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAIS 418
Query: 317 NMMGHS 322
+ S
Sbjct: 419 TIEDQS 424
Score = 143 (55.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 36/102 (35%), Positives = 58/102 (56%)
Query: 141 LVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L LK+NR+ + + S+L+++ LS NQ+++I F P +L L L+HN+L++++
Sbjct: 434 LDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLD 493
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
N L +L+ L+LR N LE P LE+L LG N
Sbjct: 494 NAVITQLANLRYLSLRNNSLETFSVGFLCPSFTLEQLWLGGN 535
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 248 (92.4 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 64/188 (34%), Positives = 98/188 (52%)
Query: 138 IQRLVLKYNRIKTVDSAIQFY-SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N +++V + + + LQ + L N + + R F + L L L+HN+++
Sbjct: 220 LRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVA 279
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL L VL L N + L R F L LEEL LG NRI ++ + FEGL
Sbjct: 280 GLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQ 339
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L +L L+DNQ+ V +F L +A + + N +L + F GLGRL +L L + L
Sbjct: 340 LEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLG 399
Query: 317 NMMGHSMA 324
+ H+ A
Sbjct: 400 RIRLHTFA 407
Score = 220 (82.5 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 64/190 (33%), Positives = 91/190 (47%)
Query: 128 DVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLV 186
D P L + RL +N I ++ + L+ + L HN++ + + FE +L
Sbjct: 284 DTFPGLLGLHVLRLA--HNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLE 341
Query: 187 ELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI 246
L LN N++ V F GL ++ V+NL GN L LP+ +F L L L L + + RI
Sbjct: 342 VLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRI 401
Query: 247 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 306
F GL+ LR L+L DN + S+ S L L EL + N T L F GLG+L
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLE 461
Query: 307 ALDLRGAGLT 316
L L LT
Sbjct: 462 YLLLSNNQLT 471
Score = 202 (76.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 70/197 (35%), Positives = 97/197 (49%)
Query: 126 NLDVIPITL--N-PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEP 181
NL IP N S+ L L+ + +++++ A+ +L H+ L N L ++ F
Sbjct: 85 NLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRH 144
Query: 182 QEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
L L L +N L + F GL L LNL N L LPD +F L +L EL L N
Sbjct: 145 TPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGN 204
Query: 242 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
+++ + A GL LR L L N LRSV FI+L L +L + N+ T +A AF G
Sbjct: 205 KLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLG 264
Query: 302 LGRLSALDL---RGAGL 315
+ L LDL R AGL
Sbjct: 265 MKALRWLDLSHNRVAGL 281
Score = 198 (74.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 73/232 (31%), Positives = 102/232 (43%)
Query: 107 CPPDCDCN--DET--LVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSL 161
CP C C+ D T L V C NL +P + S + L L N + ++ SA Q SSL
Sbjct: 41 CPVTCTCSYDDYTDELSVFCSSRNLTQLPDGIPVSTRALWLDGNNLSSIPSAAFQNLSSL 100
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
++L + L ++ + + L L L N L S+ F SL L+L N L
Sbjct: 101 DFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGR 160
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L + LF LSHL +L+LG N + + F+GL L L L N+L + LG L
Sbjct: 161 LEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGEL 220
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG-DYLHWI 332
EL + N ++ F L RL L L L + LG L W+
Sbjct: 221 RELDLSRNALRSVKANVFIHLPRLQKLYL-DRNLITAVAPRAFLGMKALRWL 271
Score = 195 (73.7 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 59/179 (32%), Positives = 89/179 (49%)
Query: 138 IQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N+I V F ++ ++LS N L ++P F+ +L L L H+ L
Sbjct: 340 LEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLG 399
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL L+ L LR N + + ++ A LS L ELDL N+++ + + F+GL
Sbjct: 400 RIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQ 459
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L +NQL + L L + N T A+G F+ LGRL L+LR L
Sbjct: 460 LEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSL 518
Score = 192 (72.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 60/190 (31%), Positives = 91/190 (47%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q+L L N I V A +L+ +DLSHN++ + F L L+L HN
Sbjct: 242 PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNA 301
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++S+ +TF L L+ L L N + L ++ F L LE L L N+I + F GL
Sbjct: 302 ITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGL 361
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
+ ++ L N LRS+P F LG L L + + + F GL L L LR
Sbjct: 362 FNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNS 421
Query: 315 LTNMMGHSMA 324
++++ S+A
Sbjct: 422 ISSIEEQSLA 431
Score = 182 (69.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 51/183 (27%), Positives = 92/183 (50%)
Query: 137 SIQRLVLKYNRIK-TVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L +NR+ ++ L + L+HN + ++ R F+ L ELQL HN++
Sbjct: 267 ALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRI 326
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ KTF GL L+VL L N + ++ F L ++ ++L N + + + F+GL
Sbjct: 327 RQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLG 386
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L+L+ + L + +F L L L + N +++ + + GL L LDL L
Sbjct: 387 RLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQL 446
Query: 316 TNM 318
T++
Sbjct: 447 THL 449
Score = 178 (67.7 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 55/171 (32%), Positives = 82/171 (47%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N + + D+ Q +L + L+ N+L + +L EL L+ N L SV
Sbjct: 175 LNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVK 234
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
FI L L+ L L N + + R F + L LDL NR++ + + F GL L +
Sbjct: 235 ANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHV 294
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L N + S+ +F L L EL++G N L + F GLG+L L L
Sbjct: 295 LRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTL 345
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 55/176 (31%), Positives = 83/176 (47%)
Query: 136 PSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L N + ++ + + S L ++L N LV +P F+ L EL L NK
Sbjct: 146 PSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNK 205
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L+ + GL L+ L+L N L + +F L L++L L +N I+ + F G+
Sbjct: 206 LTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGM 265
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
ALR L L N++ + +F L L LR+ N T+L F L L L L
Sbjct: 266 KALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQL 321
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYS-SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N ++++ + + ++ SL + L +N L + F L +L L N L
Sbjct: 123 NLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSL 182
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + F GL +L L L GN L L L L L ELDL +N + + F L
Sbjct: 183 VVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLP 242
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L+ LYLD N + +V +F+ + L L + N L + F GL L L L +
Sbjct: 243 RLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAI 302
Query: 316 TNM 318
T++
Sbjct: 303 TSL 305
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 48/164 (29%), Positives = 70/164 (42%)
Query: 143 LKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L N ++++ + Q L + L H+ L I + F L L L N +SS+ +
Sbjct: 369 LSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQ 428
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
+ GL L L+L N L LP +LF L LE L L N+++ + + L L
Sbjct: 429 SLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLD 488
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
L N+L + F LG L L + N T GL RL
Sbjct: 489 LSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTFVPQP--GLERL 530
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 246 (91.7 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 67/205 (32%), Positives = 98/205 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVD 165
CP CDC +T V C LD IP L + L L NR+ + + LQ +D
Sbjct: 31 CPTVCDCTSQTRAVFCAHRRLDTIPGGLPLDTELLDLSGNRLWGLQRGMLSRLGQLQELD 90
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQL + F + L+ L+L N+L V F GL +L +L+LR N + D
Sbjct: 91 LSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDG 150
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F+ L L++L++G N + + F GL L + L+ L +VP + L L LR
Sbjct: 151 AFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALVALR 210
Query: 286 VGLNVFTTLADGAFNGLGRLSALDL 310
+ L GA GLG+L L++
Sbjct: 211 LRELDIERLPAGALRGLGQLKELEI 235
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 60/190 (31%), Positives = 88/190 (46%)
Query: 135 NPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
+P + L+L I + + S + V +H +L IP G P + + L L+ N+
Sbjct: 15 SPLLFLLLLPGGSISSCPTVCDCTSQTRAVFCAHRRLDTIP--GGLPLDTEL-LDLSGNR 71
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L + L L+ L+L N L L F L L L L NR+ + F GL
Sbjct: 72 LWGLQRGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGL 131
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
TAL +L L NQ+ +F LG L +L VG N +A GAF GL +LS + L
Sbjct: 132 TALTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCN 191
Query: 315 LTNMMGHSMA 324
L+ + G ++A
Sbjct: 192 LSTVPGLALA 201
Score = 151 (58.2 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 61/195 (31%), Positives = 93/195 (47%)
Query: 145 YNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQ-EKLVELQLNHNKLSSVNNKTF 203
+ R+ T+ + + L +DLS N+L + RG + +L EL L++N+LS++ F
Sbjct: 48 HRRLDTIPGGLPLDTEL--LDLSGNRLWGLQ-RGMLSRLGQLQELDLSYNQLSTLEPGAF 104
Query: 204 IGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLD 263
GL+SL L L+GN L + +F+ L+ L LDL N+I F L +L+ L +
Sbjct: 105 HGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEVG 164
Query: 264 DNQLRSVPTPSFIYLGMLAEL---RVGLNVFTTLADGAFNGLG--RLSALDLRG--AGLT 316
DN L V +F L L+ + R L+ LA L RL LD+ AG
Sbjct: 165 DNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGAL 224
Query: 317 NMMGHSMALGDYLHW 331
+G L + HW
Sbjct: 225 RGLGQLKEL-EIHHW 238
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/184 (29%), Positives = 80/184 (43%)
Query: 141 LVLKYNRIKT-VDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N+I +D A SLQ +++ N LV + F KL + L LS+V
Sbjct: 137 LDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVP 196
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALR 258
L +L L LR +E LP L L+EL++ + +D GL L
Sbjct: 197 GLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLN-LS 255
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L + L SVP + +L L L + N + + + L RL L L GA LT++
Sbjct: 256 SLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSI 315
Query: 319 MGHS 322
H+
Sbjct: 316 AAHA 319
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 120 VTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIP 175
+T + NL +P + P++ L L+ I+ + + A++ L+ +++ H +
Sbjct: 185 ITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEAL 244
Query: 176 IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEE 235
G L L + LSSV + L L++L+L N + +P R +PL L+E
Sbjct: 245 DPGSLVGLNLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQE 304
Query: 236 LDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 292
L L ++ I F GLTA +L + DN L+++ +F L LR+ N T
Sbjct: 305 LRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLT 361
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 246 (91.7 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C NL +P ++ + + L L N+I+ + + + L+H++
Sbjct: 47 CPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEI 104
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I I F L L+L N+L+++ N F+ L LK L LR N +E +P
Sbjct: 105 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 164
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+S I + FEGL+ LR L L LR +P + L L
Sbjct: 165 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLVKLD 222
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N + + G+F GL L L
Sbjct: 223 ELDLSGNHLSAIRPGSFQGLMHLQKL 248
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
++ L L NR+ T+ + A + S L+ + L +N + +IP F L L L K
Sbjct: 125 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR 184
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS ++ F GL +L+ LNL L ++P+ PL L+ELDL N +S I F+GL
Sbjct: 185 LSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLSAIRPGSFQGL 242
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ +Q++ + +F L L E+ + N T L F L L + L
Sbjct: 243 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 137 SIQRLVLK-YNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q LV+ R +T S + V L +P G +L+ L N ++
Sbjct: 32 ALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREVP-DGISTNTRLLNLHENQIQI 90
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
VN+ F L+ L++L L N + + F L++L L+L NR++ I F L+
Sbjct: 91 IKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLS 148
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDL 310
L+ L+L +N + S+P+ +F + L L +G L + +++GAF GL L L+L
Sbjct: 149 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 109 PDCDCNDETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHV 164
PD + T ++ E + +I + ++ L L N I+T++ A ++L +
Sbjct: 71 PD-GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 129
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF--LEDL 222
+L N+L IP F KL EL L +N + S+ + F + SL+ L+L G L +
Sbjct: 130 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL-GELKRLSYI 188
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F LS+L L+L + I L L L L N L ++ SF L L
Sbjct: 189 SEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQ 246
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+L + + + AF+ L L ++L LT ++ H +
Sbjct: 247 KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 286
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 241 (89.9 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 75/223 (33%), Positives = 107/223 (47%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQ 162
A+ CP C C V+C+ N +P++L PS QRL L+ N I+T+ F S+L
Sbjct: 27 AAPSCPMLCTCYSSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRTLRPGT-FGSNLL 85
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ L N L I F + L EL L N+ L S+ TF GL+ L+ L+L L
Sbjct: 86 TLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSS 145
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP +F L L+ L L +N + + F L L L+L N+LR + F LG L
Sbjct: 146 LPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSL 205
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L + N + AF GL RL+ L L L ++ G ++A
Sbjct: 206 DRLLLHGNRLQGVHRAAFRGLSRLTILYLFNNSLASLPGEALA 248
Score = 167 (63.8 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 59/182 (32%), Positives = 87/182 (47%)
Query: 131 PITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQ-LVNIPIRGFEPQEKLVEL 188
P T ++ L L N + T+ + +L+ +DL N+ L ++ F+ E+L L
Sbjct: 77 PGTFGSNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSL 136
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
L +LSS+ F GL SL+ L L+ N L L D LFA L++L L L NR+ + +
Sbjct: 137 HLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTE 196
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
F GL +L L L N+L+ V +F L L L + N +L A L L L
Sbjct: 197 HVFRGLGSLDRLLLHGNRLQGVHRAAFRGLSRLTILYLFNNSLASLPGEALADLPSLEFL 256
Query: 309 DL 310
L
Sbjct: 257 RL 258
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 126 NLDVI-PITLN--PSIQRLVLKYNR-IKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFE 180
NL I P T +++ L L NR +++++ Q LQ + L QL ++P F
Sbjct: 93 NLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFR 152
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
L L L N L + + F L +L L L GN L L + +F L L+ L L
Sbjct: 153 GLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHG 212
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
NR+ + +A F GL+ L ILYL +N L S+P + L L LR+ N
Sbjct: 213 NRLQGVHRAAFRGLSRLTILYLFNNSLASLPGEALADLPSLEFLRLNAN 261
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 245 (91.3 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 69/207 (33%), Positives = 104/207 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLV-LKYNRIKTVD-SAIQFYSSLQHV 164
CP C+CN + V C L +P + PS RL+ L NRIKT++ + L+ +
Sbjct: 39 CPSRCECNVQERSVLCHRKKLMSVPEGI-PSETRLLDLSKNRIKTINPDEFSAFPQLEEL 97
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+L+ N + I F L L L NKL + F GL +L L++ N + L D
Sbjct: 98 ELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLD 157
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
+F L +L L++G N + I F GL++L L L+ L SVPT +F +L L L
Sbjct: 158 YMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTL 217
Query: 285 RV-GLNVFTTLADGAFNGLGRLSALDL 310
R+ LN+ ++ D +F L RL L++
Sbjct: 218 RLRNLNI-NSIRDYSFKRLYRLKVLEI 243
Score = 171 (65.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 56/185 (30%), Positives = 92/185 (49%)
Query: 139 QRLVLKYNR-IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSS 197
+R VL + + + +V I S + +DLS N++ I F +L EL+LN N +S+
Sbjct: 49 ERSVLCHRKKLMSVPEGIP--SETRLLDLSKNRIKTINPDEFSAFPQLEELELNENTISA 106
Query: 198 VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL 257
+ F L L+ L LR N L+ + +F LS+L +LD+ +N+I + F+ L L
Sbjct: 107 IEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNL 166
Query: 258 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 317
R L + DN L + +F L L +L + T++ AF L L L LR + +
Sbjct: 167 RSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINS 226
Query: 318 MMGHS 322
+ +S
Sbjct: 227 IRDYS 231
Score = 127 (49.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 52/195 (26%), Positives = 85/195 (43%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ +L + N+I + D Q +L+ +++ N LV I R F L +L L L
Sbjct: 141 NLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNL 200
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ-NRISRIDQACFEGL 254
+SV + F L SL L LR + + D F L L+ L++ + + C GL
Sbjct: 201 TSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGL 260
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L + + L S+P + +L L L + N + + L RL L L G
Sbjct: 261 N-LTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQELYLVGGR 319
Query: 315 LTNMMGHSMALGDYL 329
L+ + +S +YL
Sbjct: 320 LSVIEPYSFRGLNYL 334
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+Q L L+ N++K + + S+L +D+S N++V + F+ L L++ N L
Sbjct: 118 LQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLV 177
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++++ F GL SL+ L L L +P F L L L L I+ I F+ L
Sbjct: 178 FISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYR 237
Query: 257 LRILYLDDNQLRSVPTPSFIY 277
L++L + + T + +Y
Sbjct: 238 LKVLEIANWPYLDTMTTNCLY 258
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 245 (91.3 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C NL +P ++ + + L L N+I+ + + + L+H++
Sbjct: 47 CPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEI 104
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I I F L L+L N+L+++ N F+ L LK L LR N +E +P
Sbjct: 105 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 164
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+S I + FEGL+ LR L L LR +P + L L
Sbjct: 165 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLD 222
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N + + G+F GL L L
Sbjct: 223 ELDLSGNHLSAIRPGSFQGLMHLQKL 248
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
++ L L NR+ T+ + A + S L+ + L +N + +IP F L L L K
Sbjct: 125 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR 184
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS ++ F GL +L+ LNL L ++P+ PL L+ELDL N +S I F+GL
Sbjct: 185 LSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGL 242
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ +Q++ + +F L L E+ + N T L F L L + L
Sbjct: 243 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 137 SIQRLVLK-YNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q LV+ R +T S + V L +P G +L+ L N ++
Sbjct: 32 ALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREVP-DGISTNTRLLNLHENQIQI 90
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
VN+ F L+ L++L L N + + F L++L L+L NR++ I F L+
Sbjct: 91 IKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLS 148
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDL 310
L+ L+L +N + S+P+ +F + L L +G L + +++GAF GL L L+L
Sbjct: 149 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 109 PDCDCNDETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHV 164
PD + T ++ E + +I + ++ L L N I+T++ A ++L +
Sbjct: 71 PD-GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 129
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF--LEDL 222
+L N+L IP F KL EL L +N + S+ + F + SL+ L+L G L +
Sbjct: 130 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL-GELKRLSYI 188
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F LS+L L+L + I L L L L N L ++ SF L L
Sbjct: 189 SEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ 246
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+L + + + AF+ L L ++L LT ++ H +
Sbjct: 247 KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 286
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 245 (91.3 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C NL +P ++ + + L L N+I+ + + + L+H++
Sbjct: 47 CPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEI 104
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I I F L L+L N+L+++ N F+ L LK L LR N +E +P
Sbjct: 105 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 164
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+S I + FEGL+ LR L L LR +P + L L
Sbjct: 165 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLD 222
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N + + G+F GL L L
Sbjct: 223 ELDLSGNHLSAIRPGSFQGLMHLQKL 248
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
++ L L NR+ T+ + A + S L+ + L +N + +IP F L L L K
Sbjct: 125 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR 184
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS ++ F GL +L+ LNL L ++P+ PL L+ELDL N +S I F+GL
Sbjct: 185 LSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGL 242
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ +Q++ + +F L L E+ + N T L F L L + L
Sbjct: 243 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 137 SIQRLVLK-YNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q LV+ R +T S + V L +P G +L+ L N ++
Sbjct: 32 ALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREVP-DGISTNTRLLNLHENQIQI 90
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
VN+ F L+ L++L L N + + F L++L L+L NR++ I F L+
Sbjct: 91 IKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLS 148
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDL 310
L+ L+L +N + S+P+ +F + L L +G L + +++GAF GL L L+L
Sbjct: 149 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 109 PDCDCNDETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHV 164
PD + T ++ E + +I + ++ L L N I+T++ A ++L +
Sbjct: 71 PD-GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 129
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF--LEDL 222
+L N+L IP F KL EL L +N + S+ + F + SL+ L+L G L +
Sbjct: 130 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL-GELKRLSYI 188
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F LS+L L+L + I L L L L N L ++ SF L L
Sbjct: 189 SEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ 246
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+L + + + AF+ L L ++L LT ++ H +
Sbjct: 247 KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 286
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 245 (91.3 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C NL +P ++ + + L L N+I+ + + + L+H++
Sbjct: 47 CPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEI 104
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I I F L L+L N+L+++ N F+ L LK L LR N +E +P
Sbjct: 105 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 164
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+S I + FEGL+ LR L L LR +P + L L
Sbjct: 165 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLD 222
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N + + G+F GL L L
Sbjct: 223 ELDLSGNHLSAIRPGSFQGLMHLQKL 248
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
++ L L NR+ T+ + A + S L+ + L +N + +IP F L L L K
Sbjct: 125 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR 184
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS ++ F GL +L+ LNL L ++P+ PL L+ELDL N +S I F+GL
Sbjct: 185 LSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGL 242
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ +Q++ + +F L L E+ + N T L F L L + L
Sbjct: 243 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 137 SIQRLVLK-YNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q LV+ R +T S + V L +P G +L+ L N ++
Sbjct: 32 ALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREVP-DGISTNTRLLNLHENQIQI 90
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
VN+ F L+ L++L L N + + F L++L L+L NR++ I F L+
Sbjct: 91 IKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLS 148
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDL 310
L+ L+L +N + S+P+ +F + L L +G L + +++GAF GL L L+L
Sbjct: 149 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 109 PDCDCNDETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHV 164
PD + T ++ E + +I + ++ L L N I+T++ A ++L +
Sbjct: 71 PD-GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 129
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF--LEDL 222
+L N+L IP F KL EL L +N + S+ + F + SL+ L+L G L +
Sbjct: 130 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL-GELKRLSYI 188
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F LS+L L+L + I L L L L N L ++ SF L L
Sbjct: 189 SEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ 246
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+L + + + AF+ L L ++L LT ++ H +
Sbjct: 247 KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 286
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 245 (91.3 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C NL +P ++ + + L L N+I+ + + + L+H++
Sbjct: 47 CPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEI 104
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I I F L L+L N+L+++ N F+ L LK L LR N +E +P
Sbjct: 105 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 164
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+S I + FEGL+ LR L L LR +P + L L
Sbjct: 165 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLD 222
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N + + G+F GL L L
Sbjct: 223 ELDLSGNHLSAIRPGSFQGLMHLQKL 248
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
++ L L NR+ T+ + A + S L+ + L +N + +IP F L L L K
Sbjct: 125 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR 184
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS ++ F GL +L+ LNL L ++P+ PL L+ELDL N +S I F+GL
Sbjct: 185 LSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGL 242
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ +Q++ + +F L L E+ + N T L F L L + L
Sbjct: 243 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 137 SIQRLVLK-YNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q LV+ R +T S + V L +P G +L+ L N ++
Sbjct: 32 ALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLREVP-DGISTNTRLLNLHENQIQI 90
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
VN+ F L+ L++L L N + + F L++L L+L NR++ I F L+
Sbjct: 91 IKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLS 148
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDL 310
L+ L+L +N + S+P+ +F + L L +G L + +++GAF GL L L+L
Sbjct: 149 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 109 PDCDCNDETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHV 164
PD + T ++ E + +I + ++ L L N I+T++ A ++L +
Sbjct: 71 PD-GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 129
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF--LEDL 222
+L N+L IP F KL EL L +N + S+ + F + SL+ L+L G L +
Sbjct: 130 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL-GELKRLSYI 188
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F LS+L L+L + I L L L L N L ++ SF L L
Sbjct: 189 SEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ 246
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+L + + + AF+ L L ++L LT ++ H +
Sbjct: 247 KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 286
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 244 (91.0 bits), Expect = 8.5e-20, P = 8.5e-20
Identities = 63/188 (33%), Positives = 97/188 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N +++V + + LQ + L HN L + F + L L L+HN++
Sbjct: 220 LRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVG 279
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL L VL L N L L R F L LEEL LG NR+ ++ + FEGL
Sbjct: 280 GLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQ 339
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L +L L+DNQ++ + +F+ L +A + + N L + F GLG+L +L L + L
Sbjct: 340 LEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLG 399
Query: 317 NMMGHSMA 324
+ H+ A
Sbjct: 400 RVGLHTFA 407
Score = 229 (85.7 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 54/148 (36%), Positives = 80/148 (54%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ + L HN+L +P + FE +L L LN N++ + F+GL ++ V+NL GN L
Sbjct: 316 LEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLR 375
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
+LP+++F L L L L + + R+ F GL+ LR L+L DN L ++ S L
Sbjct: 376 NLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAE 435
Query: 281 LAELRVGLNVFTTLADGAFNGLGRLSAL 308
L EL + N T L F GLG+L L
Sbjct: 436 LLELDLTANRLTHLPGRLFQGLGKLEYL 463
Score = 210 (79.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 60/151 (39%), Positives = 79/151 (52%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
+L H+ L NQL ++ F L L L++N LS V F GL +L LNL N L
Sbjct: 123 NLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSL 182
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
LPD F L++L EL L N+++ + A F GL LR L L N LRSV F+ L
Sbjct: 183 AVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLP 242
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +L + N+ +A GAF G+ L LDL
Sbjct: 243 KLQKLYLDHNLLAAVAPGAFLGMKALRWLDL 273
Score = 203 (76.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 64/209 (30%), Positives = 97/209 (46%)
Query: 107 CPPDCDC--NDET--LVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSL 161
CP C C +D T L V C NL +P + + + L L N +V + A + SSL
Sbjct: 41 CPAACSCGHDDYTDELSVFCSSRNLTQLPDGIPDAARALWLDSNNFSSVPAGAFRNLSSL 100
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
++L + L ++ + + L L L N+L S+ TF+ L L L N L
Sbjct: 101 GFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSR 160
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+ + LF L++L +L+LG N ++ + F GL LR L L N+L + F LG L
Sbjct: 161 VEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGEL 220
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
EL + N ++ F L +L L L
Sbjct: 221 RELDLSRNALRSVKANVFVKLPKLQKLYL 249
Score = 202 (76.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 61/181 (33%), Positives = 88/181 (48%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q+L L +N + V A +L+ +DLSHN++ + F L L+L HN
Sbjct: 242 PKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNA 301
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L+S+ +TF L L+ L L N L LP++ F L LE L L N+I I F GL
Sbjct: 302 LASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGL 361
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
+ ++ L N LR++P F LG L L + + + F GL L L L+ G
Sbjct: 362 FNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNG 421
Query: 315 L 315
L
Sbjct: 422 L 422
Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 59/189 (31%), Positives = 90/189 (47%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N+I+ + + A ++ ++LS N L N+P + F KL L L H+ L
Sbjct: 340 LEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLG 399
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V TF GL L+ L L+ N LE + ++ L+ L ELDL NR++ + F+GL
Sbjct: 400 RVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGK 459
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L L N+L ++P + L L V N L + LG+L L LR L
Sbjct: 460 LEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRYLSLRNNSLR 519
Query: 317 NMMGHSMAL 325
+ + L
Sbjct: 520 TFVPQPLGL 528
Score = 184 (69.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 57/171 (33%), Positives = 84/171 (49%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N + + D+A ++L+ + L+ N+L + F +L EL L+ N L SV
Sbjct: 175 LNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVK 234
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F+ L L+ L L N L + F + L LDL NR+ + + F GL L +
Sbjct: 235 ANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHV 294
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L N L S+ +F L L EL++G N L + AF GLG+L L L
Sbjct: 295 LRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLAL 345
Score = 160 (61.4 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 53/176 (30%), Positives = 80/176 (45%)
Query: 136 PSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + L L N + V+ + Q ++L ++L N L +P F L EL L NK
Sbjct: 146 PGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNK 205
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L+ + F GL L+ L+L N L + +F L L++L L N ++ + F G+
Sbjct: 206 LTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGM 265
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
ALR L L N++ + +F L L LR+ N +L F L L L L
Sbjct: 266 KALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQL 321
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 46/129 (35%), Positives = 59/129 (45%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L+ N SSV F L SL LNL+G+ L L + L +L L L +N++ +
Sbjct: 79 LWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLA 138
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
F L L L +N L V F L L +L +G N L D AF+GL L
Sbjct: 139 AHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRE 198
Query: 308 LDLRGAGLT 316
L L G LT
Sbjct: 199 LVLAGNKLT 207
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 244 (91.0 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C NL +P ++ + + L L N+I+ + + + L+H++
Sbjct: 47 CPSVCSCSNQFSKVICVRKNLRDVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEI 104
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I I F L L+L N+L+++ N F+ L LK L LR N +E +P
Sbjct: 105 LQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP 164
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+S I + FEGL+ LR L L LR +P + L L
Sbjct: 165 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLD 222
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N + + G+F GL L L
Sbjct: 223 ELDLSGNHLSAIRPGSFQGLMHLQKL 248
Score = 182 (69.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 55/176 (31%), Positives = 87/176 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
++ L L NR+ T+ + A + S L+ + L +N + +IP F L L L K
Sbjct: 125 NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR 184
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS ++ F GL +L+ LNL L ++P+ PL L+ELDL N +S I F+GL
Sbjct: 185 LSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGL 242
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ +Q++ + +F L L E+ + N T L F L L + L
Sbjct: 243 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 137 SIQRLVLK-YNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q LV+ R +T S + V L ++P G +L+ L N ++
Sbjct: 32 ALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKNLRDVP-DGISTNTRLLNLHENQIQI 90
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
VN+ F L+ L++L L N + + F L++L L+L NR++ I F L+
Sbjct: 91 IKVNS--FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLS 148
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDL 310
L+ L+L +N + S+P+ +F + L L +G L + +++GAF GL L L+L
Sbjct: 149 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 109 PDCDCNDETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHV 164
PD + T ++ E + +I + ++ L L N I+T++ A ++L +
Sbjct: 71 PD-GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 129
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF--LEDL 222
+L N+L IP F KL EL L +N + S+ + F + SL+ L+L G L +
Sbjct: 130 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL-GELKRLSYI 188
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F LS+L L+L + I L L L L N L ++ SF L L
Sbjct: 189 SEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ 246
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+L + + + AF+ L L ++L LT ++ H +
Sbjct: 247 KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT-LLPHDL 286
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 245 (91.3 bits), Expect = 9.9e-20, P = 9.9e-20
Identities = 70/209 (33%), Positives = 108/209 (51%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSS 160
+AS CP C C+++ V C + +L+ +P +++ + + L L+ N I+ + S + +
Sbjct: 53 EASPACPALCSCSNQASRVICTKKSLNEVPQSISSNTRYLNLQENSIQVIRSDTFKHLNH 112
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ + LS NQ+ I + F L+ L+L N+L V ++ F L L+ L LR N +E
Sbjct: 113 LEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIE 172
Query: 221 DLPDRLFAPLSHLEELDLGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
LP F + L LDLG+ R +S I +A FEGL LR L L L+ VP + L
Sbjct: 173 TLPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVP--NLTPLV 230
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L EL + N + G+F GL L L
Sbjct: 231 RLEELELSGNQLGVVRPGSFQGLVSLRKL 259
Score = 183 (69.5 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 56/177 (31%), Positives = 89/177 (50%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH-N 193
P++ L L NR+ V S A ++ S L+ + L +N + +P F L L L
Sbjct: 135 PNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELR 194
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
KLS ++ F GL +L+ LNL L+D+P+ PL LEEL+L N++ + F+G
Sbjct: 195 KLSFISEAAFEGLLNLRFLNLGMCGLKDVPN--LTPLVRLEELELSGNQLGVVRPGSFQG 252
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +LR L+L +++ + +F L L EL + N +L F L +L + L
Sbjct: 253 LVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHL 309
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 210 KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS 269
+ LNL+ N ++ + F L+HLE L L +N+I +I+ F GL L L L DN+L
Sbjct: 90 RYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPL 149
Query: 270 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
VP+ +F YL L EL + N TL AF+ + L LDL
Sbjct: 150 VPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDL 190
Score = 144 (55.7 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + + TF L L++L L N + + F L +L L+L NR+ +
Sbjct: 92 LNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVP 151
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + ++P +F + L L +G L + +++ AF GL L
Sbjct: 152 SQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLR 211
Query: 307 ALDLRGAGLTNM 318
L+L GL ++
Sbjct: 212 FLNLGMCGLKDV 223
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS NQL + F+ L +L L H+++S + F LK+L+ LNL N L
Sbjct: 232 LEELELSGNQLGVVRPGSFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLH 291
Query: 221 DLPDRLFAPLSHLEELDLGQN 241
LP LF PL LE + L N
Sbjct: 292 SLPHDLFTPLQQLERVHLNHN 312
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 243 (90.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 68/206 (33%), Positives = 104/206 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C L +P ++ + + L L+ N I+ + + + L+H++
Sbjct: 48 CPSVCSCSNQFSKVICTRRGLRDVPDGISTNTRYLNLQENLIQVIK--VDSFKHLRHLEI 105
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + NI I F L L+L N+L+++ N F L LK L LR N +E +P
Sbjct: 106 LQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIP 165
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+S I + FEGL+ LR L L L+ +P + I L L
Sbjct: 166 SYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIP--NLIPLVRLD 223
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N + + G+F GL L L
Sbjct: 224 ELEMSGNQLSIIRPGSFKGLVHLQKL 249
Score = 180 (68.4 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 54/176 (30%), Positives = 91/176 (51%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
++ L L NR+ T+ + A ++ S L+ + L +N + +IP F L L L K
Sbjct: 126 NLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR 185
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS ++ F GL +L+ LNL L+++P+ + PL L+EL++ N++S I F+GL
Sbjct: 186 LSYISEGAFEGLSNLRYLNLGMCNLKEIPNLI--PLVRLDELEMSGNQLSIIRPGSFKGL 243
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ Q++++ +F L L EL + N T L F L L + L
Sbjct: 244 VHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHL 299
Score = 163 (62.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 52/187 (27%), Positives = 94/187 (50%)
Query: 134 LNPSIQRLVLK-YNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
L+ ++Q LV+ R +T S + V + L ++P G + + LQ
Sbjct: 30 LSLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICTRRGLRDVP-DGISTNTRYLNLQ--E 86
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N + + +F L+ L++L L N + ++ F L++L L+L NR++ I FE
Sbjct: 87 NLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFE 146
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDLR 311
L+ L+ L+L +N + S+P+ +F + L L +G L + +++GAF GL L L+L
Sbjct: 147 YLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL- 205
Query: 312 GAGLTNM 318
G+ N+
Sbjct: 206 --GMCNL 210
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 56/189 (29%), Positives = 88/189 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N I+ ++ A ++L ++L N+L IP FE KL EL L +N +
Sbjct: 103 LEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIE 162
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL+ L+L G L + + F LS+L L+LG + I L
Sbjct: 163 SIPSYAFNRVPSLRRLDL-GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLI--PL 219
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L + NQL + SF L L +L + T+ AF+ L L L+L
Sbjct: 220 VRLDELEMSGNQLSIIRPGSFKGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNN 279
Query: 315 LTNMMGHSM 323
LT ++ H +
Sbjct: 280 LT-LLPHDL 287
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 241 (89.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 62/186 (33%), Positives = 96/186 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQFY-SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N ++ + + + LQ + L N + + F + L L L+HN+++
Sbjct: 220 LRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVA 279
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL L+VL L N + L R F L LEEL LG NRI ++ + FEGL
Sbjct: 280 GLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQ 339
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L +L LD NQL+ V +F+ L +A + + N L + F GLG+L +L L G+ L
Sbjct: 340 LEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLG 399
Query: 317 NMMGHS 322
+ H+
Sbjct: 400 RIRPHT 405
Score = 229 (85.7 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 66/206 (32%), Positives = 98/206 (47%)
Query: 128 DVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLV 186
D P L + RL +N I ++ + L+ + L HN++ + R FE +L
Sbjct: 284 DTFPGLLGLRVLRL--SHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLE 341
Query: 187 ELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI 246
L L+HN+L V F+GL ++ V+NL GN L +LP+++F L L L L + + RI
Sbjct: 342 VLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRI 401
Query: 247 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 306
F GL+ LR L+L DN L + S L L EL + N T L F GLG+L
Sbjct: 402 RPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLE 461
Query: 307 ALDLRGAGLTNMMGHSMALGDYLHWI 332
L L L + ++ W+
Sbjct: 462 YLLLSRNRLAELPADALGPLQRAFWL 487
Score = 226 (84.6 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 64/159 (40%), Positives = 84/159 (52%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
+L H+ L NQL ++ + F L L L++N+LS + + F GL SL LNL N L
Sbjct: 123 NLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSL 182
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
LPD F L L EL L NR++ + A F GL LR L L N LR++ F+ L
Sbjct: 183 AVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLP 242
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDL---RGAGL 315
L +L + N+ +A GAF GL L LDL R AGL
Sbjct: 243 RLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGL 281
Score = 207 (77.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 70/209 (33%), Positives = 95/209 (45%)
Query: 107 CPPDCDCN--DET--LVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
CP C C+ D+ L V C NL +P + Q L L N + +V +A Q SSL
Sbjct: 41 CPAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAFQNLSSL 100
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
++L QL ++ + E L L L N+L S+ TF +L L L N L
Sbjct: 101 GFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSR 160
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L D LF L L +L+LG N ++ + A F GL +LR L L N+L + F L L
Sbjct: 161 LEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAEL 220
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
EL + N + F L RL L L
Sbjct: 221 RELDLSRNALRAIKANVFVQLPRLQKLYL 249
Score = 206 (77.6 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 60/189 (31%), Positives = 91/189 (48%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q+L L N I V A +L+ +DLSHN++ + F L L+L+HN
Sbjct: 242 PRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNA 301
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++S+ +TF L L+ L L N + L +R F L LE L L N++ + F GL
Sbjct: 302 IASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGL 361
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
T + ++ L N LR++P F LG L L + + + F GL L L L+ G
Sbjct: 362 TNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNG 421
Query: 315 LTNMMGHSM 323
L + S+
Sbjct: 422 LVGIEEQSL 430
Score = 198 (74.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 57/175 (32%), Positives = 89/175 (50%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ L L +N + + D+A + SL+ + L+ N+L + F +L EL L+ N L
Sbjct: 171 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNAL 230
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ F+ L L+ L L N + + F L L LDL NR++ + + F GL
Sbjct: 231 RAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLL 290
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR+L L N + S+ +F L L EL++G N LA+ +F GLG+L L L
Sbjct: 291 GLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTL 345
Score = 192 (72.6 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 59/183 (32%), Positives = 92/183 (50%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ LVL NR+ + A+ + L+ +DLS N L I F +L +L L+ N +
Sbjct: 195 SLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLI 254
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++V F+GLK+L+ L+L N + L + F L L L L N I+ + F+ L
Sbjct: 255 AAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLH 314
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N++R + SF LG L L + N + GAF GL ++ ++L G L
Sbjct: 315 FLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCL 374
Query: 316 TNM 318
N+
Sbjct: 375 RNL 377
Score = 172 (65.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 55/179 (30%), Positives = 86/179 (48%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L +N+++ V + A +++ ++LS N L N+P + F KL L L + L
Sbjct: 340 LEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLG 399
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL L+ L L+ N L + ++ L+ L ELDL N+++ + F+GL
Sbjct: 400 RIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGK 459
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N+L +P + L L V N L + LGRL L LR L
Sbjct: 460 LEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSL 518
Score = 170 (64.9 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 57/171 (33%), Positives = 86/171 (50%)
Query: 141 LVLKYNRIKTVDSAIQFYS-SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N+++++ ++ +L + LS+N+L + FE L +L L N L+ +
Sbjct: 127 LHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLP 186
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ F GL SL+ L L GN L L LF+ L+ L ELDL +N + I F L L+
Sbjct: 187 DAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQK 246
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LYLD N + +V +F+ L L L + N L + F GL L L L
Sbjct: 247 LYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRL 297
Score = 169 (64.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 55/176 (31%), Positives = 81/176 (46%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P++ L L NR+ + D + SL ++L N L +P F L EL L N+
Sbjct: 146 PALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNR 205
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L+ + F GL L+ L+L N L + +F L L++L L +N I+ + F GL
Sbjct: 206 LAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGL 265
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
ALR L L N++ + +F L L LR+ N +L F L L L L
Sbjct: 266 KALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQL 321
Score = 155 (59.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 47/125 (37%), Positives = 60/125 (48%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L+ N LSSV F L SL LNL+G L L + L +L L L +N++ +
Sbjct: 79 LWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLA 138
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
F AL L L +N+L + F LG L +L +G N L D AF GLG L
Sbjct: 139 LGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRE 198
Query: 308 LDLRG 312
L L G
Sbjct: 199 LVLAG 203
Score = 135 (52.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S L+ + L N LV I + +L+EL L N+L+ + ++ F GL L+ L L N
Sbjct: 410 SGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNR 469
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS-VPTP 273
L +LP PL LD+ NR+ + + L LR L L +N LR+ P P
Sbjct: 470 LAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQP 525
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 241 (89.9 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 63/182 (34%), Positives = 93/182 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N +++V + + LQ + L HN + + F + L L L+HN++
Sbjct: 224 LRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVG 283
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
S+ +F GL L VL L N L L R F L LEEL LG NR+ ++ + F GL
Sbjct: 284 SLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQ 343
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L +L L+DNQL+ + F+ L LA L + N L + AF GL +L +L L G L
Sbjct: 344 LEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLA 403
Query: 317 NM 318
+
Sbjct: 404 RL 405
Score = 226 (84.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 67/209 (32%), Positives = 98/209 (46%)
Query: 107 CPPDCDC--NDET--LVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSL 161
CP C C +D T L V C NL +P L P + L L N ++ +A + S L
Sbjct: 45 CPAVCSCGHDDFTDELSVFCSSRNLTQLPGGLPPGTRALWLDGNNFSSIPAAAFRNLSGL 104
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
++L + L ++ + L L L HN+L ++ TF+ L L L N L
Sbjct: 105 GFLNLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSR 164
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L + LF L+HL +L+LG N ++ + F+GL LR L L N+L + P F LG L
Sbjct: 165 LDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGEL 224
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
EL + N ++ F L +L L L
Sbjct: 225 RELDLSRNTLRSVKANVFVKLPKLQKLYL 253
Score = 218 (81.8 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 56/148 (37%), Positives = 75/148 (50%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ + L HN+L +P F +L L LN N+L + F+GL++L VLNL N L
Sbjct: 320 LEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLR 379
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
DLP+R F L+ L L L ++R+ F GL+ LR L+L N + V S L
Sbjct: 380 DLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAE 439
Query: 281 LAELRVGLNVFTTLADGAFNGLGRLSAL 308
L EL + N T L F LGRL L
Sbjct: 440 LLELDLTANQLTHLPGRLFQDLGRLEYL 467
Score = 211 (79.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 62/189 (32%), Positives = 92/189 (48%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q+L L +N + V A +L+ +DLSHN++ ++ F L L+L+HN
Sbjct: 246 PKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNV 305
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L+ + +TF L L+ L L N L LP+ FA L LE L L N++ + F GL
Sbjct: 306 LAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGL 365
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L +L L N LR +P +F L L L + L AF GL L L L+G
Sbjct: 366 RNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNS 425
Query: 315 LTNMMGHSM 323
+ ++ S+
Sbjct: 426 IADVDERSL 434
Score = 196 (74.1 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 58/150 (38%), Positives = 76/150 (50%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L H+ L HN+L + F L L L++N LS ++ F GL L LNL N L
Sbjct: 128 LCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLT 187
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
LPD F L+ L EL L N+++ + F GL LR L L N LRSV F+ L
Sbjct: 188 VLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPK 247
Query: 281 LAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +L + N+ +A GAF G+ L LDL
Sbjct: 248 LQKLYLDHNLVAAVAPGAFLGMKALRWLDL 277
Score = 193 (73.0 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 57/185 (30%), Positives = 91/185 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L +NR+ ++ + + L + LSHN L + R F+ L ELQL HN+L
Sbjct: 271 ALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQLGHNRL 330
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + F GL L+VL L N L++L F L +L L+L N + + + F+GL
Sbjct: 331 RQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLA 390
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L+L+ L + +F L L L + N + + + GL L LDL L
Sbjct: 391 KLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQL 450
Query: 316 TNMMG 320
T++ G
Sbjct: 451 THLPG 455
Score = 180 (68.4 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 56/171 (32%), Positives = 83/171 (48%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N + + D+A Q + L+ + L+ N+L + F +L EL L+ N L SV
Sbjct: 179 LNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVK 238
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F+ L L+ L L N + + F + L LDL NR+ + + F GL L +
Sbjct: 239 ANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHV 298
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L N L + +F L L EL++G N L + AF GLG+L L L
Sbjct: 299 LRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLAL 349
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 51/156 (32%), Positives = 74/156 (47%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
+L ++LS N L ++P R F+ KL L L L+ + F GL L+ L L+GN +
Sbjct: 367 NLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSI 426
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
D+ +R L+ L ELDL N+++ + F+ L L L L N+L ++P + L
Sbjct: 427 ADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQ 486
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L V N L A L RL L LR L
Sbjct: 487 RTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSL 522
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 56/178 (31%), Positives = 81/178 (45%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHV---DLSHNQLVNIPIRGFEPQEKLVELQLNH 192
P + L L N + +D + + L H+ +L N L +P F+ L EL L
Sbjct: 150 PGLASLGLSNNLLSRLDEGL--FRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAG 207
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
NKL+ + F GL L+ L+L N L + +F L L++L L N ++ + F
Sbjct: 208 NKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFL 267
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
G+ ALR L L N++ S+ SF L L LR+ NV L F L L L L
Sbjct: 268 GMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNVLAGLRPRTFKDLHFLEELQL 325
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 48/146 (32%), Positives = 61/146 (41%)
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S L +P G P + L L+ N SS+ F L L LNL+G+ L L +
Sbjct: 65 SSRNLTQLP-GGLPPGTRA--LWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQA 121
Query: 227 FAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
L L L L NR+ + F L L L +N L + F L L +L +
Sbjct: 122 LLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNL 181
Query: 287 GLNVFTTLADGAFNGLGRLSALDLRG 312
G N T L D AF GL L L L G
Sbjct: 182 GWNSLTVLPDTAFQGLAGLRELVLAG 207
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 37/116 (31%), Positives = 55/116 (47%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S L+ + L N + ++ R +L+EL L N+L+ + + F L L+ L L N
Sbjct: 414 SGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYLLLARNR 473
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS-VPTP 273
L LP PL LD+ NR+ + A L+ LR L L +N LR+ P P
Sbjct: 474 LSALPADALGPLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSLRTFAPQP 529
>UNIPROTKB|Q50LG9 [details] [associations]
symbol:LRRC24 "Leucine-rich repeat-containing protein 24"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
EMBL:AB178281 EMBL:AC084125 EMBL:BC111067 IPI:IPI00455850
RefSeq:NP_001019849.2 UniGene:Hs.459391 UniGene:Hs.740859
ProteinModelPortal:Q50LG9 SMR:Q50LG9 DMDM:296434571 PaxDb:Q50LG9
PRIDE:Q50LG9 Ensembl:ENST00000529415 GeneID:441381 KEGG:hsa:441381
UCSC:uc003zdm.3 CTD:441381 GeneCards:GC08M145747 HGNC:HGNC:28947
HPA:HPA037689 neXtProt:NX_Q50LG9 PharmGKB:PA142671520
HOGENOM:HOG000234857 HOVERGEN:HBG079563 InParanoid:Q50LG9
OMA:NITLAHA OrthoDB:EOG4DR9CG GenomeRNAi:441381 NextBio:110128
ArrayExpress:Q50LG9 Bgee:Q50LG9 CleanEx:HS_LRRC24
Genevestigator:Q50LG9 GermOnline:ENSG00000177021 Uniprot:Q50LG9
Length = 513
Score = 239 (89.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 67/201 (33%), Positives = 101/201 (50%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQ 162
+A CP C C T V C L V+P+ + P Q L L+ N I ++ A+ ++L+
Sbjct: 20 AAGCPAACRCYSAT--VECGALRLRVVPLGIPPGTQTLFLQDNNIARLEPGALAPLAALR 77
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+ L +N L + F Q +L+EL L N+L + + F+GL L+VL L GN L L
Sbjct: 78 RLYLHNNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQLRVLYLAGNQLARL 137
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F L L+EL L +N I ++ GL++L +L L NQL ++ + L L
Sbjct: 138 LDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISREALQPLASLQ 197
Query: 283 ELRVGLNVFTTLADGAFNGLG 303
LR+ N + D A + LG
Sbjct: 198 VLRLTENPWR--CDCALHWLG 216
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 51/158 (32%), Positives = 74/158 (46%)
Query: 153 SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVL 212
+A + YS+ V+ +L +P+ G P + + LQ N ++ + L +L+ L
Sbjct: 25 AACRCYSAT--VECGALRLRVVPL-GIPPGTQTLFLQ--DNNIARLEPGALAPLAALRRL 79
Query: 213 NLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 272
L N L L F L EL L NR+ + F GL LR+LYL NQL +
Sbjct: 80 YLHNNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQLRVLYLAGNQLARLLD 139
Query: 273 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+F++L L EL + N L D A GL L+ LDL
Sbjct: 140 FTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDL 177
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 240 (89.5 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 73/228 (32%), Positives = 112/228 (49%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C L +P ++ + + L L+ N+I+ + + + L+H++
Sbjct: 48 CPSVCSCSNQFSKVICTRRGLKDVPDGVSTNTRYLNLQDNQIQVIK--VDSFKHLRHLEI 105
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + NI I F L L+L N+L+++ N F L LK L LR N +E +P
Sbjct: 106 LQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIP 165
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F+ L L LDLG+ R+S I F+GL+ LR L L L+ VP + L L
Sbjct: 166 SDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVP--NIQPLIRLD 223
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYLH 330
EL + N T + +F GL L L + A + + +S D LH
Sbjct: 224 ELEMSGNQLTVIQPSSFKGLVHLQKLWMMHAQVQTIERNSF---DDLH 268
Score = 179 (68.1 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 54/176 (30%), Positives = 92/176 (52%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK- 194
S+ L L NR+ T+ + A ++ S L+ + L +N + +IP F L L L K
Sbjct: 126 SLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKR 185
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
LS +++ F GL +L+ LNL L+++P+ PL L+EL++ N+++ I + F+GL
Sbjct: 186 LSYISSGAFQGLSNLRYLNLGMCNLKEVPN--IQPLIRLDELEMSGNQLTVIQPSSFKGL 243
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L++ Q++++ SF L L EL + N T L + L L + L
Sbjct: 244 VHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHLQRVHL 299
Score = 165 (63.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 52/184 (28%), Positives = 91/184 (49%)
Query: 137 SIQRLVLK-YNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q LV+ R +T S + V + L ++P G + + LQ N++
Sbjct: 33 ALQLLVVAGLVRAQTCPSVCSCSNQFSKVICTRRGLKDVP-DGVSTNTRYLNLQ--DNQI 89
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ +F L+ L++L L N + ++ F L+ L L+L NR++ I FE L+
Sbjct: 90 QVIKVDSFKHLRHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYLS 149
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDLRGAG 314
L+ L+L +N + S+P+ +F L L L +G L + ++ GAF GL L L+L G
Sbjct: 150 KLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNL---G 206
Query: 315 LTNM 318
+ N+
Sbjct: 207 MCNL 210
Score = 144 (55.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 56/189 (29%), Positives = 87/189 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N I+ ++ A +SL ++L N+L IP FE KL EL L +N +
Sbjct: 103 LEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIE 162
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F L SL+ L+L G L + F LS+L L+LG + + + L
Sbjct: 163 SIPSDAFSRLPSLRRLDL-GELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPN--IQPL 219
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L + NQL + SF L L +L + T+ +F+ L L L+L
Sbjct: 220 IRLDELEMSGNQLTVIQPSSFKGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNN 279
Query: 315 LTNMMGHSM 323
LT + H +
Sbjct: 280 LT-FLPHDL 287
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L +K V + IQ L +++S NQL I F+ L +L + H ++
Sbjct: 199 NLRYLNLGMCNLKEVPN-IQPLIRLDELEMSGNQLTVIQPSSFKGLVHLQKLWMMHAQVQ 257
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
++ +F L SL+ LNL N L LP L+ PL HL+ + L N
Sbjct: 258 TIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHLQRVHLHHN 302
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 238 (88.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 67/205 (32%), Positives = 104/205 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
C C C +T V CK ++L IPI L+P L L NRI + + + Y +L+ +
Sbjct: 18 CQSGCKCPTKTTAV-CKGSSLRSIPILLDPRTTVLDLSNNRISRLSADELSLYPNLEQLI 76
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L +N + ++ F L L L+ N L S+ N+ F LK+LK L + N ++ P+
Sbjct: 77 LHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDVQLGPE- 135
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
FA LS L+ L + NR+S + + + L+ LR L L N+L S+P LG L L+
Sbjct: 136 CFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETLK 195
Query: 286 VGLNVFTTLADGAFNGLGRLSALDL 310
+ N+ ++L G F L LD+
Sbjct: 196 LKQNLLSSLETGMFLSQKELKHLDV 220
Score = 214 (80.4 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 59/202 (29%), Positives = 100/202 (49%)
Query: 125 ANLDVIPITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQE 183
+ L ++L P++++L+L N I + + + SL+ +DLS N L+++P F +
Sbjct: 59 SRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLK 118
Query: 184 KLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
L L ++ N + + + F GL L+ L++ N L LP + PLS L LDL N++
Sbjct: 119 NLKTLIISSNDVQ-LGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKL 177
Query: 244 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 303
+ + L L L L N L S+ T F+ L L V N+ + +GA GL
Sbjct: 178 LSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALYGLE 237
Query: 304 RLSALDLRGAGLTNMMGHSMAL 325
+L L+L L + G++ +L
Sbjct: 238 KLETLNLTNNQLVRLPGNTWSL 259
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 56/208 (26%), Positives = 102/208 (49%)
Query: 109 PDCDCNDETL-VVTCKEANLDVIPIT-LNP--SIQRLVLKYNRIKTVDSAIQF-YSSLQH 163
P+C L ++ + L +P + L P ++ L L N++ ++ +++ L+
Sbjct: 134 PECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLET 193
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N L ++ F Q++L L ++ N + + GL+ L+ LNL N L LP
Sbjct: 194 LKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQLVRLP 253
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ-LRSVPTPSFIYLGMLA 282
++ L L+ LDL N ++ A F+GL AL+ L + ++ L+++ +F+ L L
Sbjct: 254 GNTWS-LPALKTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLKTIQMATFVQLSSLH 312
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + + T + AFN + LS LDL
Sbjct: 313 WLSISSSALTHIHPSAFNPIPPLSHLDL 340
Score = 173 (66.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 46/149 (30%), Positives = 79/149 (53%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DLS+N++ + L +L L++N ++ ++ F L SL+VL+L N L LP
Sbjct: 51 LDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLP 110
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY-LGMLA 282
+ +F+ L +L+ L + N + ++ CF GL+ L+ L + DN+L +P PS + L L
Sbjct: 111 NEVFSKLKNLKTLIISSNDV-QLGPECFAGLSQLQTLSIADNRLSFLP-PSVLKPLSGLR 168
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L + N ++ N LG L L L+
Sbjct: 169 NLDLSANKLLSMPASVMNNLGGLETLKLK 197
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 46/185 (24%), Positives = 83/185 (44%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L + N I ++ A+ L+ ++L++NQLV +P + L L L+ N
Sbjct: 215 LKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQLVRLPGNTWS-LPALKTLDLSSNLFV 273
Query: 197 SVNNKTFIGLKSLKVLNL-RGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S+ +F GL +L+ LN+ L+ + F LS L L + + ++ I + F +
Sbjct: 274 SLETASFDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIP 333
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L +N+LR V P + + L + N + D + L D + +G
Sbjct: 334 PLSHLDLSNNELRYV-APGMLQWPNIRNLHLANNDWHCSCDLRVSNLNPRD--DAKCSGP 390
Query: 316 TNMMG 320
N+ G
Sbjct: 391 ENLAG 395
>ZFIN|ZDB-GENE-040724-113 [details] [associations]
symbol:si:ch211-191d15.2 "si:ch211-191d15.2"
species:7955 "Danio rerio" [GO:0016226 "iron-sulfur cluster
assembly" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040724-113 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 EMBL:AL845326
GeneTree:ENSGT00690000102271 IPI:IPI00504200
ProteinModelPortal:F1QT78 Ensembl:ENSDART00000140801 Uniprot:F1QT78
Length = 221
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 67/206 (32%), Positives = 100/206 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIP--ITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV 164
CP C C +V C+ L +P + LN ++ L + NR+ VD+ Q YS LQ +
Sbjct: 6 CPNGCCCPHPGALVLCESLGLHTLPRSVPLNTAV--LSVARNRLCNVDNMFQPYSGLQEL 63
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
LSHNQLV P RG P L LQL N+++ + + L +L L+L N + +
Sbjct: 64 SLSHNQLVRFP-RGL-PAS-LETLQLQENQITYITTGSLRQLGNLTRLDLEDNRIRSVQP 120
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
L+ L L L NR+SR+ LT L + +N + ++ S L L L
Sbjct: 121 GALLSLTRLRMLTLKGNRLSRLPANLPSSLTHLDV---SENCISALDLSSLFMLVNLQVL 177
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDL 310
R+ N T+ + AF+GL L ++DL
Sbjct: 178 RINSNCLHTIPERAFDGLSHLRSVDL 203
Score = 157 (60.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSS 197
+Q L L +N++ + +SL+ + L NQ+ I L L L N++ S
Sbjct: 60 LQELSLSHNQLVRFPRGLP--ASLETLQLQENQITYITTGSLRQLGNLTRLDLEDNRIRS 117
Query: 198 VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL 257
V + L L++L L+GN L LP L + L+HL D+ +N IS +D + L L
Sbjct: 118 VQPGALLSLTRLRMLTLKGNRLSRLPANLPSSLTHL---DVSENCISALDLSSLFMLVNL 174
Query: 258 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
++L ++ N L ++P +F L L + + N++
Sbjct: 175 QVLRINSNCLHTIPERAFDGLSHLRSVDLANNLW 208
Score = 126 (49.4 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 34/106 (32%), Positives = 58/106 (54%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ RL L+ NRI++V A+ + L+ + L N+L +P P L L ++ N +
Sbjct: 104 NLTRLDLEDNRIRSVQPGALLSLTRLRMLTLKGNRLSRLPAN--LPSS-LTHLDVSENCI 160
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
S+++ + L +L+VL + N L +P+R F LSHL +DL N
Sbjct: 161 SALDLSSLFMLVNLQVLRINSNCLHTIPERAFDGLSHLRSVDLANN 206
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 211 VLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA-LRILYLDDNQLRS 269
VL++ N L ++ D +F P S L+EL L N++ R + GL A L L L +NQ+
Sbjct: 39 VLSVARNRLCNV-DNMFQPYSGLQELSLSHNQLVRFPR----GLPASLETLQLQENQITY 93
Query: 270 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ T S LG L L + N ++ GA L RL L L+G L+ +
Sbjct: 94 ITTGSLRQLGNLTRLDLEDNRIRSVQPGALLSLTRLRMLTLKGNRLSRL 142
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 240 (89.5 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 60/160 (37%), Positives = 82/160 (51%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q +D+S N + +P F+ L ELQL N LS ++ K GLK LKVL L+ N L+
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P LS L+ L L N I+ + + FEGL LR L+LDDN L VP L L
Sbjct: 120 VPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTL 179
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
L + LN +++ D AF L L L L + ++ H
Sbjct: 180 QALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQH 219
Score = 208 (78.3 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 64/183 (34%), Positives = 92/183 (50%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N++KTV S AI+ S+LQ + L N + ++P FE +L L L+ N L+ V
Sbjct: 110 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVP 169
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
L +L+ L L N + +PD F LS L L L N+I + Q CF+GL L
Sbjct: 170 VHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLET 229
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L+ N L P + L L EL N + + DGAF+G L + L L+ +
Sbjct: 230 LDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS-FV 287
Query: 320 GHS 322
G+S
Sbjct: 288 GNS 290
Score = 200 (75.5 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 58/209 (27%), Positives = 95/209 (45%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSL 161
A C C C+ + V C L +P L+ Q L + N I + + A + + L
Sbjct: 25 APPLCAAPCSCDGDRRV-DCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFL 83
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ + L+ N L I + ++L L L +N+L +V ++ GL +L+ L L N +
Sbjct: 84 EELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITS 143
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P+ F L L L L N ++ + L L+ L L N++ S+P +F L L
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSL 203
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N +L+ F+GL L LDL
Sbjct: 204 VVLHLHNNKIRSLSQHCFDGLDNLETLDL 232
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/204 (29%), Positives = 96/204 (47%)
Query: 116 ETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQL 171
E V+T + L +P I ++Q L L N I +V + + + L+H+ L N L
Sbjct: 106 ELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL 165
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+P+ L L L NK+SS+ + F L SL VL+L N + L F L
Sbjct: 166 TEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLD 225
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
+LE LDL N + QA + L +L+ L N + +P +F +L + + N
Sbjct: 226 NLETLDLNYNNLGEFPQA-IKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPL 284
Query: 292 TTLADGAFNGLGRLSALDLRGAGL 315
+ + + AF+ L L +L +RGA +
Sbjct: 285 SFVGNSAFHNLSDLHSLVIRGASM 308
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 53/172 (30%), Positives = 80/172 (46%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
NP ++ + L N + V +SA S L + + +V L L L
Sbjct: 271 NPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ-QFPNLTGTVHLESLTLTGT 329
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
K+SS+ N K L+ L+L N + DLP F LEE+ L +N+I +I + F+G
Sbjct: 330 KISSIPNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQG 387
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
L +LRIL L N + + + +F LG + L V N T+ NGL +L
Sbjct: 388 LISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQL 439
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/175 (30%), Positives = 77/175 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ SL+ + N + IP F+ L + L N LS
Sbjct: 226 NLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 285
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V N F L L L +RG + ++ P+ HLE L L +IS I +
Sbjct: 286 FVGNSAFHNLSDLHSLVIRGASMVQQFPN--LTGTVHLESLTLTGTKISSIPNNLCQEQK 343
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N +R +P SF L E+ + N + +G F GL L LDL
Sbjct: 344 MLRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDL 396
Score = 159 (61.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 47/155 (30%), Positives = 76/155 (49%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L N + + A+ L+ + L +NQL +P L L+L+ N
Sbjct: 81 PFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANH 140
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++SV +F GL L+ L L N L ++P + L L+ L L N+IS I F L
Sbjct: 141 ITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNL 200
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
++L +L+L +N++RS+ F L L L + N
Sbjct: 201 SSLVVLHLHNNKIRSLSQHCFDGLDNLETLDLNYN 235
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 205 GLKSL-KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLD 263
GL + + L++ N + LP+ F LEEL L N +S I GL L++L L
Sbjct: 54 GLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQ 113
Query: 264 DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+NQL++VP+ + L L LR+ N T++ + +F GL +L L L LT + H +
Sbjct: 114 NNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPL 173
Query: 324 A 324
+
Sbjct: 174 S 174
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 34/124 (27%), Positives = 64/124 (51%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L +I ++ + + Q L+ +DLS+N + ++P F L E+ L N++
Sbjct: 321 LESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIY 378
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL SL++L+L N + ++ R FA L + LD+ N ++ GL
Sbjct: 379 QIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQ 438
Query: 257 LRIL 260
L+++
Sbjct: 439 LKLV 442
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 239 (89.2 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 60/160 (37%), Positives = 83/160 (51%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q +D+S N + +P F+ L EL+L N LS ++ K GLK LKVL L+ N L+
Sbjct: 143 QLLDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 202
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P LS L+ L L N I+ + + FEGLT LR L+LDDN L VP L L
Sbjct: 203 VPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTL 262
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
L + LN +++ D AF L L L L + ++ H
Sbjct: 263 QALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQH 302
Score = 213 (80.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 65/183 (35%), Positives = 92/183 (50%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N++KTV S AI+ SSLQ + L N + ++P FE +L L L+ N L+ V
Sbjct: 193 LTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVP 252
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
L +L+ L L N + +PD F LS L L L N+I + Q CF+GL L
Sbjct: 253 VHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLET 312
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L+ N L P + L L EL N + + DGAF+G L + L L+ +
Sbjct: 313 LDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLS-FV 370
Query: 320 GHS 322
G+S
Sbjct: 371 GNS 373
Score = 207 (77.9 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 61/204 (29%), Positives = 98/204 (48%)
Query: 116 ETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQL 171
E V+T + L +P I S+Q L L N I +V + + + + L+H+ L N L
Sbjct: 189 ELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSL 248
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+P+ L L L NK+SS+ + F L SL VL+L N ++ L F L
Sbjct: 249 TEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLD 308
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
+LE LDL N + QA + L +L+ L N + +P +F +L + + N
Sbjct: 309 NLETLDLNYNNLGEFPQA-IKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPL 367
Query: 292 TTLADGAFNGLGRLSALDLRGAGL 315
+ + + AF+ L L +L +RGA +
Sbjct: 368 SFVGNSAFHNLSELHSLVIRGASM 391
Score = 202 (76.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 59/209 (28%), Positives = 95/209 (45%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSL 161
A C C C+ + V C L +P L+ Q L + N I + + A + + L
Sbjct: 108 APPLCAAPCSCDGDRRV-DCSGKGLTAVPEGLSAFTQLLDISMNNITQLPEDAFKNFPFL 166
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ + L+ N L I + ++L L L +N+L +V ++ GL SL+ L L N +
Sbjct: 167 EELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITS 226
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P+ F L+ L L L N ++ + L L+ L L N++ S+P +F L L
Sbjct: 227 VPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSL 286
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N +L F+GL L LDL
Sbjct: 287 VVLHLHNNKIKSLGQHCFDGLDNLETLDL 315
Score = 176 (67.0 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 53/172 (30%), Positives = 83/172 (48%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
NP ++ + L N + V +SA S L + + +V +L L L
Sbjct: 354 NPLLKTIHLYDNPLSFVGNSAFHNLSELHSLVIRGASMVQ-RFPNLTGTVRLESLTLTGT 412
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
K+SS++N K L+ L+L N ++DLP F LEE+ L +N+I +I + F+G
Sbjct: 413 KISSISNNLCQEQKRLRTLDLSYNSIKDLPS--FNGCHALEEISLQRNQIHQIKEDTFQG 470
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
LT+L+IL L N + + +F LG + L V N T+ NGL +L
Sbjct: 471 LTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFNELTSFPTEGLNGLNQL 522
Score = 158 (60.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 36/124 (29%), Positives = 65/124 (52%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L +I ++ + + Q L+ +DLS+N + ++P F L E+ L N++
Sbjct: 404 LESLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDLP--SFNGCHALEEISLQRNQIH 461
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL SLK+L+L N + ++ DR FA L + LD+ N ++ GL
Sbjct: 462 QIKEDTFQGLTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVSFNELTSFPTEGLNGLNQ 521
Query: 257 LRIL 260
L+++
Sbjct: 522 LKLV 525
Score = 156 (60.0 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 46/155 (29%), Positives = 76/155 (49%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L N + + A+ L+ + L +NQL +P L L+L+ N
Sbjct: 164 PFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANH 223
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++SV +F GL L+ L L N L ++P + L L+ L L N+IS I F L
Sbjct: 224 ITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNL 283
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
++L +L+L +N+++S+ F L L L + N
Sbjct: 284 SSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYN 318
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 205 GLKSL-KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLD 263
GL + ++L++ N + LP+ F LEEL L N +S I GL L++L L
Sbjct: 137 GLSAFTQLLDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQ 196
Query: 264 DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+NQL++VP+ + L L LR+ N T++ + +F GL +L L L LT + H +
Sbjct: 197 NNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVHPL 256
Query: 324 A 324
+
Sbjct: 257 S 257
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/175 (29%), Positives = 75/175 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ SL+ + N + IP F+ L + L N LS
Sbjct: 309 NLETLDLNYNNLGEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLS 368
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V N F L L L +RG + ++ P+ LE L L +IS I +
Sbjct: 369 FVGNSAFHNLSELHSLVIRGASMVQRFPN--LTGTVRLESLTLTGTKISSISNNLCQEQK 426
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N ++ +P SF L E+ + N + + F GL L LDL
Sbjct: 427 RLRTLDLSYNSIKDLP--SFNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDL 479
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 238 (88.8 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 60/160 (37%), Positives = 81/160 (50%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q +D+S N + +P F+ L ELQL N LS ++ K GLK LKVL L+ N L
Sbjct: 60 QALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRT 119
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P LS L+ L L N I+ + + FEGL LR L+LDDN L VP L L
Sbjct: 120 VPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTL 179
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
L + LN +++ D AF L L L L + ++ H
Sbjct: 180 QALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQH 219
Score = 206 (77.6 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 63/183 (34%), Positives = 91/183 (49%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N+++TV S AI S+LQ + L N + ++P FE +L L L+ N L+ V
Sbjct: 110 LTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVP 169
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ L +L+ L L N + +PD F LS L L L N+I + Q CF+GL L
Sbjct: 170 VRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLET 229
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L+ N L P + L L EL N + + DGAF G L + L L+ +
Sbjct: 230 LDLNYNYLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLS-FV 287
Query: 320 GHS 322
G+S
Sbjct: 288 GNS 290
Score = 200 (75.5 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 58/209 (27%), Positives = 94/209 (44%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSL 161
A C C C+ + V C L +P L+ Q L + N I + + A + + L
Sbjct: 25 APPLCAAPCSCDGDRRV-DCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKSFPFL 83
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ + L+ N L I + ++L L L +N+L +V ++ GL +L+ L L N +
Sbjct: 84 EELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITS 143
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P+ F L L L L N ++ + L L+ L L N + S+P +F L L
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSL 203
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N +L+ F+GL L LDL
Sbjct: 204 VVLHLHNNKIKSLSQHCFDGLDNLETLDL 232
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 57/173 (32%), Positives = 83/173 (47%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVN-IPIRGFEPQEKLVELQLNH 192
NP ++ + L N + V +SA S L + + LV P L L L
Sbjct: 271 NPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFP--NLTGTVHLESLTLTG 328
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
K+SS+ + K L+ L+L N + DLP F LEE+ L +N+IS I + F+
Sbjct: 329 TKISSIPDDLCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQISLIKENTFQ 386
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
GLT+LRIL L N +R + + +F LG + L V N T+ NGL +L
Sbjct: 387 GLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQL 439
Score = 159 (61.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 47/155 (30%), Positives = 76/155 (49%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L N + + A+ L+ + L +NQL +P L L+L+ N
Sbjct: 81 PFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANH 140
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++SV +F GL L+ L L N L ++P R + L L+ L L N IS I F L
Sbjct: 141 ITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNL 200
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
++L +L+L +N+++S+ F L L L + N
Sbjct: 201 SSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYN 235
Score = 158 (60.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 56/175 (32%), Positives = 76/175 (43%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ SL+ + N + IP F L + L N LS
Sbjct: 226 NLETLDLNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLS 285
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI-DQACFEGLT 255
V N F L L L +RG L L + HLE L L +IS I D C +
Sbjct: 286 FVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTV-HLESLTLTGTKISSIPDDLC-QNQK 343
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N +R +P SF L E+ + N + + + F GL L LDL
Sbjct: 344 MLRTLDLSYNNIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDL 396
Score = 146 (56.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L +I ++ D Q L+ +DLS+N + ++P F L E+ L N++S
Sbjct: 321 LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLP--SFNGCRALEEISLQRNQIS 378
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL SL++L+L N + ++ FA L + LD+ N ++ GL
Sbjct: 379 LIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQ 438
Query: 257 LRIL 260
L+++
Sbjct: 439 LKLV 442
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 56/195 (28%), Positives = 78/195 (40%)
Query: 127 LDVIPITLN--PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQE 183
LD P + PS++ L N I + D A L+ + L N L + F
Sbjct: 237 LDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLS 296
Query: 184 KLVELQLNHNKLSS-VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
L L + L N T G L+ L L G + +PD L L LDL N
Sbjct: 297 DLHCLVIRGASLVQWFPNLT--GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNN 354
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I D F G AL + L NQ+ + +F L L L + N+ + GAF L
Sbjct: 355 IR--DLPSFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKL 412
Query: 303 GRLSALDLRGAGLTN 317
G ++ LD+ LT+
Sbjct: 413 GTITNLDVSFNELTS 427
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 238 (88.8 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 60/160 (37%), Positives = 81/160 (50%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q +D+S N + +P F+ L ELQL N LS ++ K GLK LKVL L+ N L
Sbjct: 60 QALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRT 119
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P LS L+ L L N I+ + + FEGL LR L+LDDN L VP L L
Sbjct: 120 VPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTL 179
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
L + LN +++ D AF L L L L + ++ H
Sbjct: 180 QALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQH 219
Score = 206 (77.6 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 63/183 (34%), Positives = 91/183 (49%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N+++TV S AI S+LQ + L N + ++P FE +L L L+ N L+ V
Sbjct: 110 LTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVP 169
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ L +L+ L L N + +PD F LS L L L N+I + Q CF+GL L
Sbjct: 170 VRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLET 229
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L+ N L P + L L EL N + + DGAF G L + L L+ +
Sbjct: 230 LDLNYNYLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLS-FV 287
Query: 320 GHS 322
G+S
Sbjct: 288 GNS 290
Score = 200 (75.5 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 58/209 (27%), Positives = 94/209 (44%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSL 161
A C C C+ + V C L +P L+ Q L + N I + + A + + L
Sbjct: 25 APPLCAAPCSCDGDRRV-DCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKSFPFL 83
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ + L+ N L I + ++L L L +N+L +V ++ GL +L+ L L N +
Sbjct: 84 EELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITS 143
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P+ F L L L L N ++ + L L+ L L N + S+P +F L L
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSL 203
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N +L+ F+GL L LDL
Sbjct: 204 VVLHLHNNKIKSLSQHCFDGLDNLETLDL 232
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 57/173 (32%), Positives = 83/173 (47%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVN-IPIRGFEPQEKLVELQLNH 192
NP ++ + L N + V +SA S L + + LV P L L L
Sbjct: 271 NPLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGASLVQWFP--NLTGTVHLESLTLTG 328
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
K+SS+ + K L+ L+L N + DLP F LEE+ L +N+IS I + F+
Sbjct: 329 TKISSIPDDLCQNQKMLRTLDLSYNNIRDLPS--FNGCRALEEISLQRNQISLIKENTFQ 386
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
GLT+LRIL L N +R + + +F LG + L V N T+ NGL +L
Sbjct: 387 GLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQL 439
Score = 159 (61.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 47/155 (30%), Positives = 76/155 (49%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L N + + A+ L+ + L +NQL +P L L+L+ N
Sbjct: 81 PFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANH 140
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++SV +F GL L+ L L N L ++P R + L L+ L L N IS I F L
Sbjct: 141 ITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNL 200
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
++L +L+L +N+++S+ F L L L + N
Sbjct: 201 SSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYN 235
Score = 158 (60.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 56/175 (32%), Positives = 76/175 (43%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ SL+ + N + IP F L + L N LS
Sbjct: 226 NLETLDLNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLS 285
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI-DQACFEGLT 255
V N F L L L +RG L L + HLE L L +IS I D C +
Sbjct: 286 FVGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTV-HLESLTLTGTKISSIPDDLC-QNQK 343
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N +R +P SF L E+ + N + + + F GL L LDL
Sbjct: 344 MLRTLDLSYNNIRDLP--SFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDL 396
Score = 146 (56.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L +I ++ D Q L+ +DLS+N + ++P F L E+ L N++S
Sbjct: 321 LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLP--SFNGCRALEEISLQRNQIS 378
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL SL++L+L N + ++ FA L + LD+ N ++ GL
Sbjct: 379 LIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQ 438
Query: 257 LRIL 260
L+++
Sbjct: 439 LKLV 442
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 56/195 (28%), Positives = 78/195 (40%)
Query: 127 LDVIPITLN--PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQE 183
LD P + PS++ L N I + D A L+ + L N L + F
Sbjct: 237 LDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPLSFVGNSAFHNLS 296
Query: 184 KLVELQLNHNKLSS-VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
L L + L N T G L+ L L G + +PD L L LDL N
Sbjct: 297 DLHCLVIRGASLVQWFPNLT--GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNN 354
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I D F G AL + L NQ+ + +F L L L + N+ + GAF L
Sbjct: 355 IR--DLPSFNGCRALEEISLQRNQISLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKL 412
Query: 303 GRLSALDLRGAGLTN 317
G ++ LD+ LT+
Sbjct: 413 GTITNLDVSFNELTS 427
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 236 (88.1 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 60/160 (37%), Positives = 82/160 (51%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q +D+S N + +P F+ L ELQL N LS ++ K GLK LKVL L+ N L+
Sbjct: 60 QALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 119
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P LS L+ L L N I+ + + FEGL LR L+LDDN L VP L L
Sbjct: 120 VPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTL 179
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
L + LN +++ D AF L L L L + ++ H
Sbjct: 180 QALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQH 219
Score = 206 (77.6 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 64/183 (34%), Positives = 92/183 (50%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N++KTV S AI+ S+LQ + L N + ++P FE +L L L+ N L+ V
Sbjct: 110 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVP 169
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ L +L+ L L N + +PD F LS L L L N+I + Q CF+GL L
Sbjct: 170 VRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLET 229
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L+ N L P + L L EL N + + DGAF G L + L L+ +
Sbjct: 230 LDLNYNNLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLS-FV 287
Query: 320 GHS 322
G+S
Sbjct: 288 GNS 290
Score = 199 (75.1 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 61/204 (29%), Positives = 97/204 (47%)
Query: 116 ETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQL 171
E V+T + L +P I ++Q L L N I +V + + + L+H+ L N L
Sbjct: 106 ELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNIL 165
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+P+R L L L N +SS+ + F L SL VL+L N ++ L F L
Sbjct: 166 TEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLD 225
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
+LE LDL N + QA + L +L+ L N + +P +F +L + + N
Sbjct: 226 NLETLDLNYNNLDEFPQA-IKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPL 284
Query: 292 TTLADGAFNGLGRLSALDLRGAGL 315
+ + + AF+ L L +L +RGA L
Sbjct: 285 SFVGNSAFHNLSDLHSLVIRGASL 308
Score = 198 (74.8 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 58/209 (27%), Positives = 94/209 (44%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSL 161
A C C C+ + V C L +P L+ Q L + N I + + A + + L
Sbjct: 25 APPLCAAPCSCDGDRRV-DCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFL 83
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ + L+ N L I + ++L L L +N+L +V ++ GL +L+ L L N +
Sbjct: 84 EELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITS 143
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P+ F L L L L N ++ + L L+ L L N + S+P +F L L
Sbjct: 144 VPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSL 203
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N +L+ F+GL L LDL
Sbjct: 204 VVLHLHNNKIKSLSQHCFDGLDNLETLDL 232
Score = 180 (68.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 60/185 (32%), Positives = 88/185 (47%)
Query: 126 NLDVIP---ITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVN-IPIRGFE 180
++ VIP NP ++ + L N + V +SA S L + + LV P
Sbjct: 259 SISVIPDGAFAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASLVQWFP--NLA 316
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
L L L K+SS+ + K L+ L+L N + DLP F LEE+ L +
Sbjct: 317 GTVHLESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPS--FNGCRALEEISLQR 374
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
N+IS I + F+GLT+LRIL L N +R + + +F LG + L V N T+ N
Sbjct: 375 NQISLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLN 434
Query: 301 GLGRL 305
GL +L
Sbjct: 435 GLNQL 439
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/155 (30%), Positives = 76/155 (49%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L N + + A+ L+ + L +NQL +P L L+L+ N
Sbjct: 81 PFLEELQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANH 140
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++SV +F GL L+ L L N L ++P R + L L+ L L N IS I F L
Sbjct: 141 ITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNL 200
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
++L +L+L +N+++S+ F L L L + N
Sbjct: 201 SSLVVLHLHNNKIKSLSQHCFDGLDNLETLDLNYN 235
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 56/176 (31%), Positives = 79/176 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ SL+ + N + IP F L + L N LS
Sbjct: 226 NLETLDLNYNNLDEFPQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLS 285
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRI-DQACFEGL 254
V N F L L L +RG + ++ P+ A HLE L L +IS I D C +
Sbjct: 286 FVGNSAFHNLSDLHSLVIRGASLVQWFPN--LAGTVHLESLTLTGTKISSIPDDLC-QNQ 342
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N +R +P SF L E+ + N + + + F GL L LDL
Sbjct: 343 KMLRTLDLSYNDIRDLP--SFNGCRALEEISLQRNQISLIKETTFQGLTSLRILDL 396
Score = 145 (56.1 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L +I ++ D Q L+ +DLS+N + ++P F L E+ L N++S
Sbjct: 321 LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLP--SFNGCRALEEISLQRNQIS 378
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL SL++L+L N + ++ FA L + LD+ N ++ GL
Sbjct: 379 LIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLNQ 438
Query: 257 LRIL 260
L+++
Sbjct: 439 LKLV 442
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 235 (87.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 65/205 (31%), Positives = 97/205 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVD 165
CP CDC + V C L+ +P L + L L NR+ + + S LQ +D
Sbjct: 31 CPAVCDCTSQPQAVLCGHRQLEAVPGGLPLDTELLDLSGNRLWGLQQGMLSRLSLLQELD 90
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQL + F + L+ L+L N+L + F GL +L +L+LR N + D
Sbjct: 91 LSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDG 150
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L++L++G N + + F GL L L L+ L +VP + L L LR
Sbjct: 151 AFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALR 210
Query: 286 VGLNVFTTLADGAFNGLGRLSALDL 310
+ L GA GLG+L L++
Sbjct: 211 LRELDIGRLPAGALRGLGQLKELEI 235
Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 57/166 (34%), Positives = 78/166 (46%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S Q V H QL +P G P + + L L+ N+L + L L+ L+L N
Sbjct: 39 SQPQAVLCGHRQLEAVP--GGLPLDTEL-LDLSGNRLWGLQQGMLSRLSLLQELDLSYNQ 95
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L L F L L L L NR+ + F GL+AL +L L NQ+ +F L
Sbjct: 96 LSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGEL 155
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
G L +L VG N +A GAF GL +LS L L L+ + G ++A
Sbjct: 156 GSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALA 201
Score = 147 (56.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 54/173 (31%), Positives = 84/173 (48%)
Query: 139 QRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
Q ++ + +++ V + + L +DLS N+L + L EL L++N+LS++
Sbjct: 42 QAVLCGHRQLEAVPGGLPLDTEL--LDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTL 99
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
F GL+SL L L+GN L + +F+ LS L LDL N+I F L +L+
Sbjct: 100 EPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQ 159
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L + DN L V +F L L+ L + +T+ A L L AL LR
Sbjct: 160 KLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALRLR 212
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 54/184 (29%), Positives = 79/184 (42%)
Query: 141 LVLKYNRIKT-VDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N+I +D A SLQ +++ N LV + F KL L L LS+V
Sbjct: 137 LDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVP 196
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALR 258
L +L L LR + LP L L+EL++ + +D GL L
Sbjct: 197 GLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGLN-LS 255
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L + L SVP + +L L L + N + + + L RL L L GA LT++
Sbjct: 256 SLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSI 315
Query: 319 MGHS 322
H+
Sbjct: 316 AAHA 319
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 36/108 (33%), Positives = 53/108 (49%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L L + LSSV + L L+VL+L N + +P R +PL L+EL L ++
Sbjct: 254 LSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLT 313
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 292
I F GLTA +L + DN L+++ +F L LR+ N T
Sbjct: 314 SIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLT 361
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 235 (87.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 62/188 (32%), Positives = 98/188 (52%)
Query: 138 IQRLVLKYNRIKTVDSAIQFY-SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N +++V + + + LQ + L N + + R F + L L L+HN+++
Sbjct: 219 LRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVA 278
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL L VL L N + L R F L LEEL LG NRI ++ + FEGL
Sbjct: 279 GLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQ 338
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L +L L+DNQ+ V +F L +A + + N +L + F GL +L +L L + L
Sbjct: 339 LEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLG 398
Query: 317 NMMGHSMA 324
++ H+ A
Sbjct: 399 HVRLHTFA 406
Score = 219 (82.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 66/181 (36%), Positives = 93/181 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYSSLQHV---DLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
++ L L N+I V + +S L +V +LS N L ++P R F+ +KL L L H+
Sbjct: 339 LEVLTLNDNQITEV--RVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSC 396
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L V TF GL L+ L LR N + + ++ A LS L ELDL NR++ + + F+GL
Sbjct: 397 LGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGL 456
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L NQL ++ L L + N TLA+G F+ LGRL L LR
Sbjct: 457 GHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNS 516
Query: 315 L 315
L
Sbjct: 517 L 517
Score = 219 (82.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 65/206 (31%), Positives = 95/206 (46%)
Query: 128 DVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLV 186
D P L + RL +N I ++ + L+ + L HN++ + R FE +L
Sbjct: 283 DTFPGLLGLHVLRLA--HNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLE 340
Query: 187 ELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI 246
L LN N+++ V F GL ++ V+NL GN L LP+R+F L L L L + + +
Sbjct: 341 VLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHV 400
Query: 247 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 306
F GL+ LR L+L DN + S+ S L L EL + N T L F GLG L
Sbjct: 401 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLE 460
Query: 307 ALDLRGAGLTNMMGHSMALGDYLHWI 332
L L LT + + W+
Sbjct: 461 YLLLSYNQLTTLSAEVLGPLQRAFWL 486
Score = 217 (81.4 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 71/197 (36%), Positives = 100/197 (50%)
Query: 126 NLDVIPITL--N-PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEP 181
NL IP N S+ L L+ + +++++ A+ +L H+ L N+L N+ + F
Sbjct: 84 NLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVGLFTH 143
Query: 182 QEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
L L L+ N L + F GL L LNL N L LPD +F L +L EL L N
Sbjct: 144 TPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGN 203
Query: 242 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
+++ + A F GL LR L L N LRSV F++L L +L + N+ T +A AF G
Sbjct: 204 KLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLG 263
Query: 302 LGRLSALDL---RGAGL 315
+ L LDL R AGL
Sbjct: 264 MKALRWLDLSHNRVAGL 280
Score = 206 (77.6 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 73/232 (31%), Positives = 104/232 (44%)
Query: 107 CPPDCDCN--DET--LVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSL 161
CP C C+ D T L V C NL +P + S + L L N + ++ SA Q SSL
Sbjct: 40 CPVACTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSL 99
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
++L + L ++ + + L L L N+L ++ F SL L+L N L
Sbjct: 100 DFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGR 159
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L + LF LSHL +L+LG N + + F+GL L L L N+L + F LG L
Sbjct: 160 LEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGEL 219
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG-DYLHWI 332
EL + N ++ F L RL L L L + LG L W+
Sbjct: 220 RELDLSRNALRSVKANVFVHLPRLQKLYL-DRNLITAVAPRAFLGMKALRWL 270
Score = 191 (72.3 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 60/190 (31%), Positives = 91/190 (47%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q+L L N I V A +L+ +DLSHN++ + F L L+L HN
Sbjct: 241 PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNA 300
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++S+ +TF L L+ L L N + L +R F L LE L L N+I+ + F GL
Sbjct: 301 IASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGL 360
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
+ ++ L N LRS+P F L L L + + + F GL L L LR
Sbjct: 361 FNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNS 420
Query: 315 LTNMMGHSMA 324
++++ S+A
Sbjct: 421 ISSIEEQSLA 430
Score = 187 (70.9 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 56/179 (31%), Positives = 86/179 (48%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N + + D+ Q +L + L+ N+L + F +L EL L+ N L SV
Sbjct: 174 LNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVK 233
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F+ L L+ L L N + + R F + L LDL NR++ + + F GL L +
Sbjct: 234 ANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHV 293
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L N + S+ +F L L EL++G N L + F GLG+L L L +T +
Sbjct: 294 LRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEV 352
Score = 187 (70.9 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 61/209 (29%), Positives = 104/209 (49%)
Query: 126 NLDVIPITLNP---SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEP 181
+L V+P T+ ++ LVL N++ + A+ L+ +DLS N L ++ F
Sbjct: 180 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVH 239
Query: 182 QEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
+L +L L+ N +++V + F+G+K+L+ L+L N + L + F L L L L N
Sbjct: 240 LPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHN 299
Query: 242 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
I+ + F+ L L L L N++R + +F LG L L + N T + GAF+G
Sbjct: 300 AIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSG 359
Query: 302 LGRLSALDLRGAGLTNMMGHSMALGDYLH 330
L ++ ++L G L ++ D LH
Sbjct: 360 LFNVAVMNLSGNCLRSLPERVFQGLDKLH 388
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 60/186 (32%), Positives = 87/186 (46%)
Query: 126 NLDVIPITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEK 184
NL V T PS+ L L N + ++ + Q S L ++L N LV +P F+
Sbjct: 135 NLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGN 194
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L EL L NKL+ + F GL L+ L+L N L + +F L L++L L +N I+
Sbjct: 195 LHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLIT 254
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
+ F G+ ALR L L N++ + +F L L LR+ N +L F L
Sbjct: 255 AVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHF 314
Query: 305 LSALDL 310
L L L
Sbjct: 315 LEELQL 320
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/164 (28%), Positives = 72/164 (43%)
Query: 143 LKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L N ++++ + Q L + L H+ L ++ + F L L L N +SS+ +
Sbjct: 368 LSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQ 427
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
+ GL L L+L N L LP +LF L HLE L L N+++ + L L
Sbjct: 428 SLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLD 487
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
+ N L ++ F LG L L + N T + GL RL
Sbjct: 488 ISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFSPQP--GLERL 529
>ZFIN|ZDB-GENE-041210-129 [details] [associations]
symbol:lrrc4.1 "leucine rich repeat containing 4.1"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041210-129 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
InterPro:IPR026882 PANTHER:PTHR24369:SF9 EMBL:BX855622
UniGene:Dr.114688 UniGene:Dr.159965 Ensembl:ENSDART00000140028
OMA:ILTHASW Uniprot:I7HJH4
Length = 858
Score = 235 (87.8 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 66/206 (32%), Positives = 98/206 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP DC CN++ V C L +P + + + L L N I++V + + +L H++
Sbjct: 44 CPTDCSCNNQLSKVVCTRRGLTRVPPGIPSTTRHLNLMENAIESVQ--VDSFRNLHHLEV 101
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L N + I + F L L+L N+L+ V + F L L+ L LR N +E +P
Sbjct: 102 LQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIP 161
Query: 224 DRLFAPLSHLEELDLGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R + I FEGL L+ L L +R P+F L L
Sbjct: 162 SYAFNRVPSLMRLDLGELRKLEYISDGAFEGLVNLKYLNLGMCNIRG-EMPNFTPLVGLE 220
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSAL 308
EL + N+F + G+F GL L L
Sbjct: 221 ELEISENLFPEIKPGSFRGLSSLKKL 246
Score = 182 (69.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 55/177 (31%), Positives = 90/177 (50%)
Query: 137 SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH-NK 194
++ L L NR+ V S A ++ S L+ + L +N + +IP F L+ L L K
Sbjct: 122 NLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELRK 181
Query: 195 LSSVNNKTFIGLKSLKVLNL-RGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L +++ F GL +LK LNL N ++P+ F PL LEEL++ +N I F G
Sbjct: 182 LEYISDGAFEGLVNLKYLNLGMCNIRGEMPN--FTPLVGLEELEISENLFPEIKPGSFRG 239
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L++L+ L++ ++Q+ + +F L L EL + N ++L + L L L L
Sbjct: 240 LSSLKKLWIMNSQIGLIERNAFDDLASLVELNLAHNNLSSLPHDLYTPLKYLVELHL 296
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 46/134 (34%), Positives = 72/134 (53%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + SV +F L L+VL L N + + F+ L++L L+L NR++ +
Sbjct: 78 LNLMENAIESVQVDSFRNLHHLEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVP 137
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L ++DGAF GL L
Sbjct: 138 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELRKLEYISDGAFEGLVNLK 197
Query: 307 ALDLRGAGLTNMMG 320
L+L G+ N+ G
Sbjct: 198 YLNL---GMCNIRG 208
Score = 136 (52.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 53/184 (28%), Positives = 87/184 (47%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N I+ ++ A ++L ++L N+L +P FE KL EL L +N +
Sbjct: 99 LEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIE 158
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL L+L G LE + D F L +L+ L+LG I R + F L
Sbjct: 159 SIPSYAFNRVPSLMRLDL-GELRKLEYISDGAFEGLVNLKYLNLGMCNI-RGEMPNFTPL 216
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L + +N + SF L L +L + + + AF+ L L L+L
Sbjct: 217 VGLEELEISENLFPEIKPGSFRGLSSLKKLWIMNSQIGLIERNAFDDLASLVELNLAHNN 276
Query: 315 LTNM 318
L+++
Sbjct: 277 LSSL 280
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 235 (87.8 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 59/157 (37%), Positives = 80/157 (50%)
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
D+S N + +P F+ L EL+L N LS ++ K GLK LKVL L+ N L+ +P
Sbjct: 17 DISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPS 76
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
LS L+ L L N I+ + + FEGL LR L+LDDN L VP L L L
Sbjct: 77 EAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQAL 136
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
+ LN +++ D AF L L L L + N+ H
Sbjct: 137 TLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQH 173
Score = 209 (78.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 64/183 (34%), Positives = 91/183 (49%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N++KTV S AI+ S+LQ + L N + ++P FE +L L L+ N L V
Sbjct: 64 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVP 123
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
L +L+ L L N + +PD F LS L L L N+I + Q CF+GL L
Sbjct: 124 VHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLET 183
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L+ N L P + L L EL N + + DGAF+G L + L L+ +
Sbjct: 184 LDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS-FV 241
Query: 320 GHS 322
G+S
Sbjct: 242 GNS 244
Score = 205 (77.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 60/204 (29%), Positives = 100/204 (49%)
Query: 116 ETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQL 171
E V+T + L +P I ++Q L L N I +V + + + + L+H+ L N L
Sbjct: 60 ELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSL 119
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+ +P+ L L L NK+SS+ + F L SL VL+L N +++L F L
Sbjct: 120 MEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLD 179
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
+LE LDL N + QA + L +L+ L N + +P +F +L + + N
Sbjct: 180 NLETLDLNYNNLGEFPQA-IKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPL 238
Query: 292 TTLADGAFNGLGRLSALDLRGAGL 315
+ + + AF+ L L +L +RGA +
Sbjct: 239 SFVGNSAFHNLSDLHSLVIRGASM 262
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/172 (29%), Positives = 82/172 (47%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
NP ++ + L N + V +SA S L + + +V L L L
Sbjct: 225 NPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ-QFPNLTGTVHLESLTLTGT 283
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
K+SS+++ K L+ L+L N ++DLP F LEE+ L +N+I +I + F+G
Sbjct: 284 KISSISSNLCQEQKMLRTLDLSYNSIKDLPS--FDGCHALEEISLQRNQIHQIKEGTFQG 341
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
L +LRIL L NQ+ + +F LG + L + N T+ +GL +L
Sbjct: 342 LVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTSFPTEGLSGLNQL 393
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 51/181 (28%), Positives = 86/181 (47%)
Query: 132 ITLN--PSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQ 189
ITLN P+++ + + N + + A + + L+ + L+ N L I + ++L L
Sbjct: 7 ITLNSLPALRDISMN-NITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLT 65
Query: 190 LNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQA 249
L +N+L +V ++ GL +L+ L L N + +P+ F L+ L L L N + +
Sbjct: 66 LQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVH 125
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 309
L L+ L L N++ S+P +F L L L + N L F+GL L LD
Sbjct: 126 PLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLD 185
Query: 310 L 310
L
Sbjct: 186 L 186
Score = 158 (60.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 53/175 (30%), Positives = 77/175 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ SL+ + N + IP F+ L + L N LS
Sbjct: 180 NLETLDLNYNNLGEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 239
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V N F L L L +RG + ++ P+ HLE L L +IS I +
Sbjct: 240 FVGNSAFHNLSDLHSLVIRGASMVQQFPN--LTGTVHLESLTLTGTKISSISSNLCQEQK 297
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N ++ +P SF L E+ + N + +G F GL L LDL
Sbjct: 298 MLRTLDLSYNSIKDLP--SFDGCHALEEISLQRNQIHQIKEGTFQGLVSLRILDL 350
Score = 151 (58.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L N + + A+ L+ + L +NQL +P L L+L+ N
Sbjct: 35 PFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANH 94
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++SV +F GL L+ L L N L ++P + L L+ L L N+IS I F L
Sbjct: 95 ITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNL 154
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
++L +L+L +N+++++ F L L L + N
Sbjct: 155 SSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYN 189
Score = 150 (57.9 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 35/124 (28%), Positives = 66/124 (53%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L +I ++ S + Q L+ +DLS+N + ++P F+ L E+ L N++
Sbjct: 275 LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNSIKDLP--SFDGCHALEEISLQRNQIH 332
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL SL++L+L N + ++ +R FA L + LD+ N ++ GL
Sbjct: 333 QIKEGTFQGLVSLRILDLSRNQIHEIHNRAFAKLGSITNLDISFNELTSFPTEGLSGLNQ 392
Query: 257 LRIL 260
L+++
Sbjct: 393 LKLV 396
Score = 147 (56.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 41/122 (33%), Positives = 62/122 (50%)
Query: 204 IGLKSLKVL-NLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
I L SL L ++ N + LP+ F LEEL L N +S I GL L++L L
Sbjct: 7 ITLNSLPALRDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTL 66
Query: 263 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+NQL++VP+ + L L LR+ N T++ + +F GL +L L L L + H
Sbjct: 67 QNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHP 126
Query: 323 MA 324
++
Sbjct: 127 LS 128
Score = 39 (18.8 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 274 SFIYLGMLAELRVGLNVFTTLADGAFNGLG--RLSAL 308
S I+L MLA + L+V + +G N L R++AL
Sbjct: 585 SAIFLLMLAAVERSLSVKDMMKNGKSNHLKQFRIAAL 621
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 232 (86.7 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 72/219 (32%), Positives = 105/219 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP C C V+C+ N +P++L PS QRL L+ N I+++ F +L + L
Sbjct: 31 CPMLCTCYSSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRSLRPGT-FGPNLLTLWL 89
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
N L I F + L EL L N+ L S+ TF GL+ L+ L+L L LP
Sbjct: 90 FSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGN 149
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L L+ L L +N + + F L L L+L N+LR + F LG L L
Sbjct: 150 IFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLL 209
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
+ N + AF+GL RL+ L L L ++ G ++A
Sbjct: 210 LHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALA 248
Score = 175 (66.7 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 60/182 (32%), Positives = 88/182 (48%)
Query: 131 PITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQ-LVNIPIRGFEPQEKLVEL 188
P T P++ L L N + T+ + +L+ +DL N+ L ++ F+ E+L L
Sbjct: 77 PGTFGPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSL 136
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
L +LSS+ F GL SL+ L L+ N L L D LFA L++L L L NR+ + +
Sbjct: 137 HLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTE 196
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
F GL +L L L N+L+ V +F L L L + N +L A L L L
Sbjct: 197 HVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFL 256
Query: 309 DL 310
L
Sbjct: 257 RL 258
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 126 NLDVI-PITLN--PSIQRLVLKYNR-IKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFE 180
NL I P T +++ L L NR +++++ Q LQ + L QL ++P F
Sbjct: 93 NLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFR 152
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
L L L N L + + F L +L L L GN L L + +F L L+ L L
Sbjct: 153 GLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHG 212
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
NR+ + +A F GL+ L ILYL +N L S+P + L L LR+ N
Sbjct: 213 NRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFLRLNAN 261
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 231 (86.4 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 72/219 (32%), Positives = 105/219 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP C C V+C+ N +P++L PS QRL L+ N I+++ F +L + L
Sbjct: 31 CPMLCTCYSSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRSLRPGT-FGPNLLTLWL 89
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
N L I F + L EL L N+ L S+ TF GL+ L+ L+L L LP
Sbjct: 90 FSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGN 149
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L L+ L L +N + + F L L L+L N+LR + F LG L L
Sbjct: 150 IFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLL 209
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
+ N + AF+GL RL+ L L L ++ G ++A
Sbjct: 210 LHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALA 248
Score = 175 (66.7 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 60/182 (32%), Positives = 88/182 (48%)
Query: 131 PITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQ-LVNIPIRGFEPQEKLVEL 188
P T P++ L L N + T+ + +L+ +DL N+ L ++ F+ E+L L
Sbjct: 77 PGTFGPNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSL 136
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
L +LSS+ F GL SL+ L L+ N L L D LFA L++L L L NR+ + +
Sbjct: 137 HLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTE 196
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
F GL +L L L N+L+ V +F L L L + N +L A L L L
Sbjct: 197 HVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFL 256
Query: 309 DL 310
L
Sbjct: 257 RL 258
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 56/169 (33%), Positives = 81/169 (47%)
Query: 126 NLDVI-PITLN--PSIQRLVLKYNR-IKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFE 180
NL I P T +++ L L NR +++++ Q LQ + L QL ++P F
Sbjct: 93 NLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFR 152
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
L L L N L + + F L +L L L GN L L + +F L L+ L L
Sbjct: 153 GLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHG 212
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
NR+ + +A F GL+ L ILYL +N L S+P + L L LR+ N
Sbjct: 213 NRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFLRLNAN 261
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 232 (86.7 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 67/207 (32%), Positives = 106/207 (51%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E +V C+ + +P ++ S Q L L+YN + T+ QF + L +
Sbjct: 31 CPYSCHC--EGKIVHCESSAFQDVPENISVSCQGLSLRYNDLHTM-LPYQFAHLNQLLWL 87
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L HNQ++ + R F+ +L EL L+ N++S ++N TF G+ +L+ L+L N L++L
Sbjct: 88 YLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQELQP 147
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
F L L+ L L N ++ I F +L L L N+LR + +F+ L L EL
Sbjct: 148 GQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRLMEL 207
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLR 311
+ N F+ + F L L AL L+
Sbjct: 208 HLEHNQFSRINFFLFPRLANLRALYLQ 234
Score = 152 (58.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
P+++ L L YN+++ + QFY LQ++ L N L IP+R F L L L +N
Sbjct: 130 PNLRSLDLSYNKLQELQPG-QFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYN 188
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+L + F+GL L L+L N + LF L++L L L NRI ++Q
Sbjct: 189 RLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIRAVNQGLPWS 248
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+ L + N+++ + F L L L + N ++ L+ + L G
Sbjct: 249 WYTLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNKLANVSQEVVAAWISLTTISLAG 307
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 37/109 (33%), Positives = 53/109 (48%)
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
S + L+LR N L + FA L+ L L L N+I +D F+G+ L+ L L N++
Sbjct: 59 SCQGLSLRYNDLHTMLPYQFAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRI 118
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
+ +F + L L + N L G F GL +L L LR GLT
Sbjct: 119 SQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLT 167
>MGI|MGI:3605040 [details] [associations]
symbol:Lrrc24 "leucine rich repeat containing 24"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3605040 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
eggNOG:NOG255871 GeneTree:ENSGT00700000104028 CTD:441381
HOGENOM:HOG000234857 HOVERGEN:HBG079563 OMA:NITLAHA
OrthoDB:EOG4DR9CG EMBL:AK048678 EMBL:AK078176 EMBL:BC116884
EMBL:BC116886 IPI:IPI00221813 RefSeq:NP_932787.1 UniGene:Mm.289666
ProteinModelPortal:Q8BHA1 SMR:Q8BHA1 PRIDE:Q8BHA1
Ensembl:ENSMUST00000049956 GeneID:378937 KEGG:mmu:378937
UCSC:uc007wme.1 InParanoid:Q14AD4 NextBio:401012 Bgee:Q8BHA1
CleanEx:MM_LRRC24 Genevestigator:Q8BHA1
GermOnline:ENSMUSG00000033707 Uniprot:Q8BHA1
Length = 521
Score = 231 (86.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 66/198 (33%), Positives = 98/198 (49%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CP C C T V C L V+P + P Q L L+ N I ++ ++ ++L+H+
Sbjct: 31 CPAACRCYSAT--VECGALRLRVVPPGIPPGTQTLFLQDNSIAHLEQGSLAPLAALRHLY 88
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L +N L + F Q +L+EL L N+L + F+GL L+VL L GN L L D
Sbjct: 89 LHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGAFVGLVQLRVLYLAGNQLAKLLDF 148
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L+EL L +N I ++ GL++L +L L NQL ++ + L L LR
Sbjct: 149 TFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISKEALQPLSSLQVLR 208
Query: 286 VGLNVFTTLADGAFNGLG 303
+ N + D A + LG
Sbjct: 209 LTENPWR--CDCALHWLG 224
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 51/158 (32%), Positives = 74/158 (46%)
Query: 153 SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVL 212
+A + YS+ V+ +L +P G P + + LQ N ++ + + L +L+ L
Sbjct: 33 AACRCYSAT--VECGALRLRVVP-PGIPPGTQTLFLQ--DNSIAHLEQGSLAPLAALRHL 87
Query: 213 NLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 272
L N L L F L EL L NR+ + F GL LR+LYL NQL +
Sbjct: 88 YLHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGAFVGLVQLRVLYLAGNQLAKLLD 147
Query: 273 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+F++L L EL + N L D A GL L+ LDL
Sbjct: 148 FTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDL 185
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 228 (85.3 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 75/223 (33%), Positives = 103/223 (46%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQ 162
A+A CP C C V+C+ N +P L P QRL L+ N I + F SL
Sbjct: 24 AAARCPMLCTCYPAPPTVSCQANNFSAVPRALPPGTQRLFLQNNLIGALRPG-SFGPSLL 82
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ L N L I F + L EL L N+ L S+ TF GL+ L+ L+L L
Sbjct: 83 TLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSS 142
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP +F L L+ L L +N + + F L L L+L N+LR + F LG L
Sbjct: 143 LPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSL 202
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L + N + AF GLGRL+ L L L ++ G ++A
Sbjct: 203 DRLLLHGNRLQGVHRAAFRGLGRLTILYLFNNSLASLPGEALA 245
Score = 175 (66.7 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 60/182 (32%), Positives = 88/182 (48%)
Query: 131 PITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQ-LVNIPIRGFEPQEKLVEL 188
P + PS+ L L N + + + +L+ +DL N+ L ++ F+ E+L L
Sbjct: 74 PGSFGPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSL 133
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
L +LSS+ F GL SL+ L L+ N L L D LFA L++L L L NR+ + +
Sbjct: 134 HLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTE 193
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
F GL +L L L N+L+ V +F LG L L + N +L A L L L
Sbjct: 194 HVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNNSLASLPGEALADLPSLEFL 253
Query: 309 DL 310
L
Sbjct: 254 RL 255
Score = 159 (61.0 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 56/169 (33%), Positives = 80/169 (47%)
Query: 126 NLDVI-PITLN--PSIQRLVLKYNR-IKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFE 180
NL I P T +++ L L NR +++++ Q LQ + L QL ++P F
Sbjct: 90 NLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFR 149
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
L L L N L + + F L +L L L GN L L + +F L L+ L L
Sbjct: 150 GLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHG 209
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
NR+ + +A F GL L ILYL +N L S+P + L L LR+ N
Sbjct: 210 NRLQGVHRAAFRGLGRLTILYLFNNSLASLPGEALADLPSLEFLRLNAN 258
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 229 (85.7 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 59/172 (34%), Positives = 97/172 (56%)
Query: 133 TLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLN 191
+L + +L + N++KTV S A+Q L ++L+HN++ I FE E L L L
Sbjct: 126 SLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLY 185
Query: 192 HNKLSSVNNKTFIGLKS-LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQAC 250
NK++ ++ + F GL+ +K LNL GN L ++P + + LS L++L++ +N+I I +
Sbjct: 186 ENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGD 245
Query: 251 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
FEGL +L L L N + +VP F +L +L L + N + + AF GL
Sbjct: 246 FEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGL 297
Score = 213 (80.0 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 58/179 (32%), Positives = 97/179 (54%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQ-FYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
+++ L L N+I +D A + ++ ++L N L NIP + L +L++ NK
Sbjct: 178 TLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENK 237
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ +++ F GL+SL L L N + +P +F+ L+ L L+L N+IS ID+ F+GL
Sbjct: 238 IRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGL 297
Query: 255 TA-LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG-RLSALDLR 311
L+ L L DNQ+ ++P+ + L L L + N LA+ AF G G L+ L+L+
Sbjct: 298 EENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQ 356
Score = 207 (77.9 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 48/155 (30%), Positives = 86/155 (55%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+ L +D+S NQ+ +P + + L+ L LNHNK++ ++N F GL++L++L L N
Sbjct: 129 AGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENK 188
Query: 219 LEDLPDRLFAPLS-HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 277
+ + F L H++ L+LG N ++ I Q L+ L+ L + +N++R++ F
Sbjct: 189 ITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEG 248
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L L L + N+ TT+ F+ L L++L+L G
Sbjct: 249 LQSLDSLILAHNMITTVPANVFSHLTLLNSLELEG 283
Score = 174 (66.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 46/167 (27%), Positives = 82/167 (49%)
Query: 126 NLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEK 184
N+ +++ ++++L ++ N+I+T+ + SL + L+HN + +P F
Sbjct: 216 NIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTL 275
Query: 185 LVELQLNHNKLSSVNNKTFIGLK-SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
L L+L NK+S ++ F GL+ +L+ L L N + +P PL L LDL N I
Sbjct: 276 LNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNI 335
Query: 244 SRIDQACFEGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+ + + F G +L L L N ++ +P+ F L L L + N
Sbjct: 336 NVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNN 382
Score = 171 (65.3 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 55/217 (25%), Positives = 100/217 (46%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITL------NPSIQRLVLKYNRIKTVDSAI 155
+ S P C L + C+ +L I ++ +P I L L++N + + +
Sbjct: 41 EQSEIAPCICTVKKNGLDILCETTDLAHITKSMGTLKGKSPIIFYLKLRHNNLPKLQGFV 100
Query: 156 QFYSSLQHVDLSHNQLVNIPIRGFEPQEK-LVELQLNHNKLSSVNNKTFIGLKSLKVLNL 214
++H+ + ++ L I L +L ++ N++ +V ++ L L +LNL
Sbjct: 101 FLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNL 160
Query: 215 RGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA-LRILYLDDNQLRSVPTP 273
N + + + F L LE L L +N+I++ID F GL ++ L L N L ++P
Sbjct: 161 NHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQK 220
Query: 274 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+ L L +L + N T+++G F GL L +L L
Sbjct: 221 ALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLIL 257
Score = 167 (63.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/134 (34%), Positives = 70/134 (52%)
Query: 138 IQRLVLKYNRIKTVDS-AIQ-FYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+ L L+ N+I +D A + +LQ++ L NQ+ IP P +L L L +N +
Sbjct: 276 LNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNI 335
Query: 196 SSVNNKTFIGL-KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG- 253
+ + F G SL LNL+ N ++ LP LF L+ LE L+L N++ RI Q E
Sbjct: 336 NVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPV 395
Query: 254 LTALRILYLDDNQL 267
+ LRI+ + DN L
Sbjct: 396 IDTLRIIDITDNPL 409
Score = 127 (49.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 39/138 (28%), Positives = 70/138 (50%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEP-QEKLVELQLNHNK 194
S+ L+L +N I TV + + + L ++L N++ I F+ +E L L+L N+
Sbjct: 251 SLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQ 310
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSH-LEELDLGQNRISRIDQACFEG 253
+ ++ ++ L L+ L+LR N + L + F L L+L +N I + FE
Sbjct: 311 IHTIPSEALRPLHRLRHLDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFEN 370
Query: 254 LTALRILYLDDNQLRSVP 271
L +L L L +N+L+ +P
Sbjct: 371 LNSLETLNLQNNKLQRIP 388
Score = 115 (45.5 bits), Expect = 0.00075, P = 0.00075
Identities = 41/163 (25%), Positives = 76/163 (46%)
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DL+H ++G P + L+L HN L + F+ L ++ L + + L + +
Sbjct: 65 DLAHITKSMGTLKGKSPI--IFYLKLRHNNLPKLQGFVFLAL-DIRHLTIHNSSLAAIEE 121
Query: 225 RLFAPL-SHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ L + L +LD+ N++ + + L L IL L+ N++ + +F L L
Sbjct: 122 NALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEI 181
Query: 284 LRVGLNVFTTLADGAFNGL-GRLSALDLRGAGLTNMMGHSMAL 325
L + N T + AF GL + L+L G LTN+ ++++
Sbjct: 182 LTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSI 224
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 229 (85.7 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 74/221 (33%), Positives = 111/221 (50%)
Query: 116 ETLVVTCKEANLDV--IPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQL- 171
E +VV +LD P TL + +LV +K+V A + L+ +++S N
Sbjct: 53 ELIVVASGIPDLDQQSFPETLR--LSKLVFLNGMLKSVSGEAFERLVELRELEISGNICW 110
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+++ I+ F L L LN+NKLS V+ F L L++L LRGN L L RLF L
Sbjct: 111 MSLDIQTFSSLTNLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLH 170
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
L+ELDL N+IS + F+ + LR+L L N++ ++P F +L L EL + N+
Sbjct: 171 RLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLI 230
Query: 292 TTLADGAFNGLGRLSALDLRG---AGLTNMMGHSMALGDYL 329
L G+F L L L+ LTN + H++ YL
Sbjct: 231 RVLTPGSFPA--SLKTLILKKNLLEKLTNAVFHTLHYITYL 269
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 60/208 (28%), Positives = 96/208 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP C C + +V C + + +P+ ++ ++ L++ + I +D F +L+ L
Sbjct: 21 CPEPCQCFSGSKLV-CSDDRMKSLPVNISTQVRELIVVASGIPDLDQQ-SFPETLRLSKL 78
Query: 167 S--HNQLVNIPIRGFEPQEKLVELQLNHNKL-SSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L ++ FE +L EL+++ N S++ +TF L +L L L N L +
Sbjct: 79 VFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNLTRLLLNNNKLSGVD 138
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L LE L L N +S + F+ L L+ L L NQ+ S+ T F L
Sbjct: 139 AGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRV 198
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLR 311
L + N L DG F L L L+LR
Sbjct: 199 LSLQANKIPNLPDGIFTHLDHLQELNLR 226
Score = 173 (66.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 56/185 (30%), Positives = 88/185 (47%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L+ N + + + Q LQ +DLS NQ+ ++ F+ +L L L NK+
Sbjct: 148 LEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIP 207
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ + F L L+ LNLR N + L F P S L+ L L +N + ++ A F L
Sbjct: 208 NLPDGIFTHLDHLQELNLRSNLIRVLTPGSF-PAS-LKTLILKKNLLEKLTNAVFHTLHY 265
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
+ L L N L VP F L L L + N +TLA F GL + ++ L+ L
Sbjct: 266 ITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLI 325
Query: 317 NMMGH 321
++ H
Sbjct: 326 SVDAH 330
Score = 168 (64.2 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 56/179 (31%), Positives = 82/179 (45%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
N ++ L L+ N+I + D LQ ++L N L+ + G P L L L N
Sbjct: 193 NSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSN-LIRVLTPGSFPAS-LKTLILKKN 250
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L + N F L + L+L N L ++P LF L LE LDL +NRIS + + F+G
Sbjct: 251 LLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKG 310
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L +++ +YL N L SV L L + N ++ G F L +LRG
Sbjct: 311 LFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDLDFQCVFELRG 369
Score = 153 (58.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 49/182 (26%), Positives = 87/182 (47%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+Q L L +N+I ++ + + Q S L+ + L N++ N+P F + L EL L N +
Sbjct: 172 LQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIR 231
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ +F SLK L L+ N LE L + +F L ++ LDL QN ++ + F+ L +
Sbjct: 232 VLTPGSFPA--SLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLIS 289
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L L +N++ ++ F L + + + N ++ L LDL L
Sbjct: 290 LETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLR 349
Query: 317 NM 318
++
Sbjct: 350 SI 351
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 232 (86.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 60/160 (37%), Positives = 81/160 (50%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q +D+S N + +P F+ L EL+L N LS ++ K GLK LKVL L+ N L+
Sbjct: 143 QALDVSMNNITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 202
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P+ LS L+ L L N I+ + + FEGL LR L+LDDN L VP L L
Sbjct: 203 VPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSL 262
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
L + LN T + D AF L L L L + + H
Sbjct: 263 QALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKH 302
Score = 197 (74.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 58/205 (28%), Positives = 92/205 (44%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVD 165
CP C C+ + V C L +P L+ Q L + N I + + A + + L+ +
Sbjct: 112 CPASCSCDGDR-GVDCSGRGLAAVPPGLSAFTQALDVSMNNITRLPEDAFKNFPYLEELR 170
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L+ N L I + ++L L L +N+L +V N+ GL L+ L L N + +P
Sbjct: 171 LAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKD 230
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L L L N ++ + L +L+ L L N++ +P +F L L L
Sbjct: 231 SFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLH 290
Query: 286 VGLNVFTTLADGAFNGLGRLSALDL 310
+ N T+ F+GL L LDL
Sbjct: 291 LHNNKIKTIGKHCFDGLDNLETLDL 315
Score = 195 (73.7 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 63/183 (34%), Positives = 89/183 (48%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N++KTV + AI+ S LQ + L N + +P FE +L L L+ N L+ V
Sbjct: 193 LTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVP 252
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
L SL+ L L N + +PD F LS L L L N+I I + CF+GL L
Sbjct: 253 IHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLET 312
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L+ N + P + L L EL N + + DGAF G L + L L+ +
Sbjct: 313 LDLNYNNMVEFPE-AIKALPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNPLS-FV 370
Query: 320 GHS 322
G+S
Sbjct: 371 GNS 373
Score = 174 (66.3 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 57/204 (27%), Positives = 91/204 (44%)
Query: 116 ETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQL 171
E V+T + L +P I +Q L L N I V + + L+H+ L N L
Sbjct: 189 ELKVLTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSL 248
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+PI L L L NK++ + + F L SL VL+L N ++ + F L
Sbjct: 249 TEVPIHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLD 308
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
+LE LDL N + +A + L L+ L N + +P +F +L + + N
Sbjct: 309 NLETLDLNYNNMVEFPEA-IKALPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNPL 367
Query: 292 TTLADGAFNGLGRLSALDLRGAGL 315
+ + + AF L L +L +RGA +
Sbjct: 368 SFVGNSAFQNLSDLHSLVIRGASM 391
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
+L+ + L+ ++ +IP+ + Q+ L L L++N + + +F G +SL+ ++L+ N +
Sbjct: 403 NLESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDL--PSFTGCRSLEEISLQHNQI 460
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
++ D F LS L LDL +NRI +I + F + A+ L L N+L SVPT L
Sbjct: 461 HEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVNLDLSFNELTSVPTEGLSGLN 520
Query: 280 ML 281
L
Sbjct: 521 QL 522
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 47/174 (27%), Positives = 81/174 (46%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L N + + A+ L+ + L +NQL +P L L+L+ N
Sbjct: 164 PYLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPNEAIRGLSGLQSLRLDANH 223
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+++V +F GL L+ L L N L ++P + L L+ L L N+I+ I F L
Sbjct: 224 ITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPLSNLPSLQALTLALNKITHIPDYAFTNL 283
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
++L +L+L +N+++++ F L L L + N + A L L L
Sbjct: 284 SSLVVLHLHNNKIKTIGKHCFDGLDNLETLDLNYNNMVEFPE-AIKALPNLKEL 336
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 40/121 (33%), Positives = 61/121 (50%)
Query: 205 GLKSL-KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLD 263
GL + + L++ N + LP+ F +LEEL L N +S I GL L++L L
Sbjct: 137 GLSAFTQALDVSMNNITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALSGLKELKVLTLQ 196
Query: 264 DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+NQL++VP + L L LR+ N T + +F GL +L L L LT + H +
Sbjct: 197 NNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEVPIHPL 256
Query: 324 A 324
+
Sbjct: 257 S 257
Score = 138 (53.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 34/129 (26%), Positives = 65/129 (50%)
Query: 132 ITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+T +++ L L +I ++ + Q L+ +DLS+N + ++P F L E+ L
Sbjct: 398 LTGTVNLESLTLTGTKINSIPVNLCQEQKMLRTLDLSYNNIKDLP--SFTGCRSLEEISL 455
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQAC 250
HN++ + + TF GL SL++L+L N + + F + + LDL N ++ +
Sbjct: 456 QHNQIHEITDDTFQGLSSLRILDLSRNRICKIHKEAFTTIGAIVNLDLSFNELTSVPTEG 515
Query: 251 FEGLTALRI 259
GL L++
Sbjct: 516 LSGLNQLKL 524
Score = 138 (53.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 50/175 (28%), Positives = 75/175 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ +L+ + N + IP F L + L N LS
Sbjct: 309 NLETLDLNYNNMVEFPEAIKALPNLKELAFHSNYISIIPDGAFAGNPLLRMIHLYDNPLS 368
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V N F L L L +RG + ++ P+ +LE L L +I+ I +
Sbjct: 369 FVGNSAFQNLSDLHSLVIRGASMVQRFPN--LTGTVNLESLTLTGTKINSIPVNLCQEQK 426
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N ++ +P SF L E+ + N + D F GL L LDL
Sbjct: 427 MLRTLDLSYNNIKDLP--SFTGCRSLEEISLQHNQIHEITDDTFQGLSSLRILDL 479
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 228 (85.3 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 64/173 (36%), Positives = 90/173 (52%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N+I TV + A Q L+ + LS N++ +P F L L L+ N+LSS++
Sbjct: 90 LHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLH 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ F GL+ L+ L+LR N L +P RLF LE LDL NR+ + + F GL LR
Sbjct: 150 PELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ NQL + F+ L L L + N + L G G L LDL G
Sbjct: 210 LHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTG 262
Score = 214 (80.4 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 69/214 (32%), Positives = 98/214 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CPP C C E L+ C +P T + L L++N I ++ QF +S L +
Sbjct: 34 CPPKCRC--EKLLFYCDSQGFHSVPNTTDKGSLGLSLRHNHITELERD-QFASFSQLTWL 90
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L HNQ+ + F+ KL EL L+ NK+ + N TF L +L+ L+L N L L
Sbjct: 91 HLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHP 150
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
LF L L+ L L N + I F +L L L N+LRS+ F L L EL
Sbjct: 151 ELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLREL 210
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N T + F L L L L+ ++N+
Sbjct: 211 HLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL 244
Score = 200 (75.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 57/168 (33%), Positives = 81/168 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L HN + + F +L L L+HN++S+V F GL LK L L N + LP
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L +L+ LDL N++S + F GL L+ L+L N LR++P F L
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MGHSMALGDYLH 330
L + N +LA F GL +L L L LT + H + L LH
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSS-LH 232
Score = 187 (70.9 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 50/135 (37%), Positives = 77/135 (57%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+Q L L+ N ++T+ + F+ SL+ +DLS N+L ++ GF KL EL L HN+L
Sbjct: 159 LQTLHLRSNSLRTIPVRL-FWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQL 217
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ +N F+ L SL L L+ N + +L + LE+LDL N I ID FE +
Sbjct: 218 TKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMP 277
Query: 256 ALRILYLDDNQLRSV 270
L+IL +D+N+L S+
Sbjct: 278 NLKILLMDNNKLNSL 292
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 31/98 (31%), Positives = 57/98 (58%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ L L++N+I + +++ + +L+ +DL+ N++ I + FE L L +++NKL
Sbjct: 230 SLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKL 289
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHL 233
+S+++K L+SL + L GN E P R+ A S L
Sbjct: 290 NSLDSKILNSLRSLTTVGLSGNLWECSP-RICALASWL 326
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 228 (85.3 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 64/173 (36%), Positives = 90/173 (52%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N+I TV + A Q L+ + LS N++ +P F L L L+ N+LSS++
Sbjct: 90 LHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLH 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ F GL+ L+ L+LR N L +P RLF LE LDL NR+ + + F GL LR
Sbjct: 150 PELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ NQL + F+ L L L + N + L G G L LDL G
Sbjct: 210 LHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTG 262
Score = 209 (78.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 68/214 (31%), Positives = 97/214 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CPP C C E L+ C +P + L L++N I ++ QF +S L +
Sbjct: 34 CPPKCRC--EKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITELERD-QFASFSQLTWL 90
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L HNQ+ + F+ KL EL L+ NK+ + N TF L +L+ L+L N L L
Sbjct: 91 HLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHP 150
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
LF L L+ L L N + I F +L L L N+LRS+ F L L EL
Sbjct: 151 ELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLREL 210
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N T + F L L L L+ ++N+
Sbjct: 211 HLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL 244
Score = 200 (75.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 57/168 (33%), Positives = 81/168 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L HN + + F +L L L+HN++S+V F GL LK L L N + LP
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L +L+ LDL N++S + F GL L+ L+L N LR++P F L
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MGHSMALGDYLH 330
L + N +LA F GL +L L L LT + H + L LH
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSS-LH 232
Score = 187 (70.9 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 50/135 (37%), Positives = 77/135 (57%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+Q L L+ N ++T+ + F+ SL+ +DLS N+L ++ GF KL EL L HN+L
Sbjct: 159 LQTLHLRSNSLRTIPVRL-FWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQL 217
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ +N F+ L SL L L+ N + +L + LE+LDL N I ID FE +
Sbjct: 218 TKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMP 277
Query: 256 ALRILYLDDNQLRSV 270
L+IL +D+N+L S+
Sbjct: 278 NLKILLMDNNKLNSL 292
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 26/85 (30%), Positives = 51/85 (60%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ L L++N+I + +++ + +L+ +DL+ N++ I + FE L L +++NKL
Sbjct: 230 SLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKL 289
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLE 220
+S+++K L+SL + L GN E
Sbjct: 290 NSLDSKILNSLRSLTTVGLSGNLWE 314
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 229 (85.7 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 65/207 (31%), Positives = 103/207 (49%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CPP C+C+ + V C V+P + ++L L NRIKT++ +F Y L+ +
Sbjct: 35 CPPRCECSAQERAVLCHRKRFMVVPEGIPTETRQLDLGKNRIKTLNQD-EFANYPHLEEL 93
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+L+ N + I F L L L N+L + F GL +L L++ N + L D
Sbjct: 94 ELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLD 153
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
+F L +L+ L++G N + I F GL +L L L+ L S+PT + +L L L
Sbjct: 154 YMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVL 213
Query: 285 RVG-LNVFTTLADGAFNGLGRLSALDL 310
R+ LN+ + D +F L RL L++
Sbjct: 214 RLRHLNI-NAIRDYSFKRLYRLKVLEI 239
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/185 (28%), Positives = 89/185 (48%)
Query: 139 QRLVLKYN-RIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSS 197
+R VL + R V I + + +DL N++ + F L EL+LN N +S+
Sbjct: 45 ERAVLCHRKRFMVVPEGIP--TETRQLDLGKNRIKTLNQDEFANYPHLEELELNENIISA 102
Query: 198 VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL 257
+ F L +L+ L LR N L+ +P +F LS+L +LD+ +N+I + F+ L L
Sbjct: 103 IEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNL 162
Query: 258 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 317
+ L + DN L + +F L L +L + T++ A + L L L LR +
Sbjct: 163 KSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 222
Query: 318 MMGHS 322
+ +S
Sbjct: 223 IRDYS 227
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 51/179 (28%), Positives = 81/179 (45%)
Query: 134 LNPSIQRLVL-KYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
LN S+++L L K N A+ L + L H + I F+ +L L+++H
Sbjct: 183 LN-SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 241
Query: 193 -NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACF 251
L ++ + GL +L L++ L +P L +L L+L N I I+ +
Sbjct: 242 WPYLDTMTSNCLYGL-NLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSML 300
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L+ + L QL +V +F L L L V N+ TTL + AF+ +G L L L
Sbjct: 301 HDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLIL 359
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 228 (85.3 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 61/188 (32%), Positives = 97/188 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQFY-SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N +++V + + + LQ + L N + + F + L L L+HN+++
Sbjct: 220 LRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVA 279
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL L VL L N + L R F L LEEL LG NRI ++ + FEGL
Sbjct: 280 GLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQ 339
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L +L L+DNQ+ V +F L +A + + N +L + F GL +L +L L + L
Sbjct: 340 LEVLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLG 399
Query: 317 NMMGHSMA 324
++ H+ A
Sbjct: 400 HVRLHTFA 407
Score = 219 (82.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 71/197 (36%), Positives = 101/197 (51%)
Query: 126 NLDVIPITL--N-PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEP 181
NL IP N S+ L L+ + +++++ A+ +L ++ L N+L N+ + F
Sbjct: 85 NLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTH 144
Query: 182 QEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
L L L+ N L + F GL L LNL N L LPD +F L +L EL L N
Sbjct: 145 TPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGN 204
Query: 242 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
+++ + A F GL LR L L N LRSV F++L L +L + N+ T +A GAF G
Sbjct: 205 KLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLG 264
Query: 302 LGRLSALDL---RGAGL 315
+ L LDL R AGL
Sbjct: 265 MKALRWLDLSHNRVAGL 281
Score = 219 (82.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 65/206 (31%), Positives = 95/206 (46%)
Query: 128 DVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLV 186
D P L + RL +N I ++ + L+ + L HN++ + R FE +L
Sbjct: 284 DTFPGLLGLHVLRLA--HNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLE 341
Query: 187 ELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI 246
L LN N+++ V F GL ++ V+NL GN L LP+R+F L L L L + + +
Sbjct: 342 VLTLNDNQITEVRVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHV 401
Query: 247 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 306
F GL+ LR L+L DN + S+ S L L EL + N T L F GLG L
Sbjct: 402 RLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLE 461
Query: 307 ALDLRGAGLTNMMGHSMALGDYLHWI 332
L L LT + + W+
Sbjct: 462 YLLLSYNQLTTLSAEVLGPLQRAFWL 487
Score = 216 (81.1 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 65/181 (35%), Positives = 93/181 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYSSLQHV---DLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
++ L L N+I V + +S L +V +LS N L ++P R F+ +KL L L H+
Sbjct: 340 LEVLTLNDNQITEV--RVGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSC 397
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L V TF GL L+ L LR N + + ++ A LS L ELDL NR++ + + F+GL
Sbjct: 398 LGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGL 457
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L NQL ++ L L + N TLA+G F+ LGR+ L LR
Sbjct: 458 GHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNS 517
Query: 315 L 315
L
Sbjct: 518 L 518
Score = 205 (77.2 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 73/232 (31%), Positives = 104/232 (44%)
Query: 107 CPPDCDCN--DET--LVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSL 161
CP C C+ D T L V C NL +P + S + L L N + ++ SA Q SSL
Sbjct: 41 CPVACTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSL 100
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
++L + L ++ + + L L L N+L ++ F SL L+L N L
Sbjct: 101 DFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGR 160
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L + LF LSHL +L+LG N + + F+GL L L L N+L + F LG L
Sbjct: 161 LEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGEL 220
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG-DYLHWI 332
EL + N ++ F L RL L L L + LG L W+
Sbjct: 221 RELDLSRNALRSVKANVFVHLPRLQKLYL-DRNLITAVAPGAFLGMKALRWL 271
Score = 192 (72.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 60/190 (31%), Positives = 91/190 (47%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q+L L N I V A +L+ +DLSHN++ + F L L+L HN
Sbjct: 242 PRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNA 301
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++S+ +TF L L+ L L N + L +R F L LE L L N+I+ + F GL
Sbjct: 302 IASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGL 361
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
+ ++ L N LRS+P F L L L + + + F GL L L LR
Sbjct: 362 FNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNS 421
Query: 315 LTNMMGHSMA 324
++++ S+A
Sbjct: 422 ISSIEEQSLA 431
Score = 183 (69.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 61/209 (29%), Positives = 103/209 (49%)
Query: 126 NLDVIPITLNP---SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEP 181
+L V+P T+ ++ LVL N++ + A+ L+ +DLS N L ++ F
Sbjct: 181 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVH 240
Query: 182 QEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
+L +L L+ N +++V F+G+K+L+ L+L N + L + F L L L L N
Sbjct: 241 LPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHN 300
Query: 242 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
I+ + F+ L L L L N++R + +F LG L L + N T + GAF+G
Sbjct: 301 AIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSG 360
Query: 302 LGRLSALDLRGAGLTNMMGHSMALGDYLH 330
L ++ ++L G L ++ D LH
Sbjct: 361 LFNVAVMNLSGNCLRSLPERVFQGLDKLH 389
Score = 180 (68.4 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 55/179 (30%), Positives = 85/179 (47%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N + + D+ Q +L + L+ N+L + F +L EL L+ N L SV
Sbjct: 175 LNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVK 234
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F+ L L+ L L N + + F + L LDL NR++ + + F GL L +
Sbjct: 235 ANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHV 294
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L N + S+ +F L L EL++G N L + F GLG+L L L +T +
Sbjct: 295 LRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEV 353
Score = 176 (67.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 60/186 (32%), Positives = 87/186 (46%)
Query: 126 NLDVIPITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEK 184
NL V T PS+ L L N + ++ + Q S L ++L N LV +P F+
Sbjct: 136 NLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGN 195
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L EL L NKL+ + F GL L+ L+L N L + +F L L++L L +N I+
Sbjct: 196 LHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLIT 255
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
+ F G+ ALR L L N++ + +F L L LR+ N +L F L
Sbjct: 256 AVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHF 315
Query: 305 LSALDL 310
L L L
Sbjct: 316 LEELQL 321
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 46/164 (28%), Positives = 72/164 (43%)
Query: 143 LKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L N ++++ + Q L + L H+ L ++ + F L L L N +SS+ +
Sbjct: 369 LSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQ 428
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
+ GL L L+L N L LP +LF L HLE L L N+++ + L L
Sbjct: 429 SLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLD 488
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
+ N L ++ F LG + L + N T + GL RL
Sbjct: 489 ISHNHLETLAEGLFSSLGRVRYLSLRNNSLQTFSPQP--GLERL 530
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 230 (86.0 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 59/163 (36%), Positives = 83/163 (50%)
Query: 148 IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLK 207
+ + S + ++S ++DLS N + +P L EL+L N L+ + F GL
Sbjct: 57 LSELPSNLSVFTS--YLDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLH 114
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
SLKVL L+ N L +P+ L L+ L L N IS + +CF GL +LR L+LDDN L
Sbjct: 115 SLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
VP +F L L + + LN +AD AF L L L L
Sbjct: 175 TDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHL 217
Score = 182 (69.1 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 56/178 (31%), Positives = 80/178 (44%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+Q L L N I V S SL+H+ L N L ++P++ F L + L NK+
Sbjct: 139 SLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKI 198
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + F L SL VL+L N + L + F L LE LDL N + A + L+
Sbjct: 199 HHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTA-IKTLS 257
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L N +RS+P +F+ L + N + AF L L L L GA
Sbjct: 258 NLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGA 315
Score = 180 (68.4 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 54/166 (32%), Positives = 83/166 (50%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L+L+ N+++ V + A+Q SLQ + L N + +P F L L L+ N L
Sbjct: 115 SLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ V + F L +L+ + L N + + D F LS L L L NRI + + CF+GL
Sbjct: 175 TDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLH 234
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
+L L L+ N L PT + L L EL N ++ + AF G
Sbjct: 235 SLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNIRSIPERAFVG 279
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/107 (36%), Positives = 55/107 (51%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L+L N + LP L L LEEL L N ++ I + F GL +L++L L +NQLR VP
Sbjct: 71 LDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVP 130
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ L L LR+ N + + F+GL L L L LT++
Sbjct: 131 EEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDV 177
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 49/175 (28%), Positives = 78/175 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S++ L L YN + +AI+ S+L+ + N + +IP R F L+ + N +
Sbjct: 235 SLETLDLNYNNLDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQ 294
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L+ L L G + + + PD + LE L L +IS + Q + L
Sbjct: 295 FVGISAFQHLPELRTLTLNGASQITEFPD--LTGTATLESLTLTGAKISSLPQTVCDQLP 352
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L++L L N L +P+ S +LR N + G F L L +L+L
Sbjct: 353 NLQVLDLSYNLLEDLPSLSGCQKLQKIDLRH--NEIYEIKGGTFQQLFNLRSLNL 405
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/146 (28%), Positives = 74/146 (50%)
Query: 132 ITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+T +++ L L +I ++ + +LQ +DLS+N L ++P +KL ++ L
Sbjct: 324 LTGTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNLLEDLP--SLSGCQKLQKIDL 381
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQAC 250
HN++ + TF L +L+ LNL N + + F+ L L +LDL N +S
Sbjct: 382 RHNEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTG 441
Query: 251 FEGLTALRILYLDDNQLRS-VPTPSF 275
GLT L++ + L+S +P+ +F
Sbjct: 442 LHGLTHLKLT--GNRALQSLIPSANF 465
Score = 131 (51.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 52/174 (29%), Positives = 81/174 (46%)
Query: 135 NPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSH-NQLVNIP-IRGFEPQEKLVELQLN 191
NPS+ + N I+ V SA Q L+ + L+ +Q+ P + G E L L
Sbjct: 280 NPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGASQITEFPDLTGTATLESLT---LT 336
Query: 192 HNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACF 251
K+SS+ L +L+VL+L N LEDLP + L+++DL N I I F
Sbjct: 337 GAKISSLPQTVCDQLPNLQVLDLSYNLLEDLPS--LSGCQKLQKIDLRHNEIYEIKGGTF 394
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
+ L LR L L N++ + +F L L +L + N+ ++ +GL L
Sbjct: 395 QQLFNLRSLNLARNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTGLHGLTHL 448
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 228 (85.3 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 69/213 (32%), Positives = 102/213 (47%)
Query: 101 HQASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYS 159
H A+ CP C C++ V C+ NL +P + QRL L+ N ++ + +A Q
Sbjct: 24 HAAAQRCPQTCICDNSRRHVACRHQNLTEVPNAIPELTQRLDLRGNVLRVIPPAAFQDLP 83
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
L H+DL H Q+ + F +L+ L L N+LS++ + GL SL+ L L GN L
Sbjct: 84 YLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLL 143
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
E+L F L L L+L N + + F+GL R L L N L SV P + G
Sbjct: 144 EELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNAL-SVLAPEAL-AG 201
Query: 280 MLAELRVGL--NVFTTLADGAFNGLGRLSALDL 310
+ A R+ L N +L A + L+ L+L
Sbjct: 202 LPALRRLSLHHNELQSLPGLALSQARGLARLEL 234
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/187 (32%), Positives = 85/187 (45%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + L L++ +++ V + A + L ++L+ N+L +P + L L+L N
Sbjct: 83 PYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNL 142
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L + TF L +L LNL N L LP F L L L N +S + GL
Sbjct: 143 LEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGL 202
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA--DG-AFNGL-------GR 304
ALR L L N+L+S+P + LA L +G N FT DG A GL G
Sbjct: 203 PALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHGA 262
Query: 305 LSALDLR 311
L ALD R
Sbjct: 263 LQALDPR 269
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 63/221 (28%), Positives = 99/221 (44%)
Query: 115 DETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVDS-AIQFYSSLQHVDLSHNQ 170
++T ++ + + ++P + RLV L++ I +++ A+ SL ++ LS N
Sbjct: 418 NDTQLLDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNG 477
Query: 171 LVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPL 230
L + E +L L L N+ V L SL L+L+ N ++ L A
Sbjct: 478 LSGLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGG 537
Query: 231 SHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 290
L L L NR++++ L L+LD NQL VPT + L L EL++ N
Sbjct: 538 RALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNP 597
Query: 291 FTTLADGAFNGLGR-LSALDLRGAGLTNMM-GHSMALGDYL 329
L +GAF +GR L L L +GL + G LG L
Sbjct: 598 LRALQEGAFRPVGRSLQHLFLNSSGLEQISPGAFSGLGPQL 638
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 56/188 (29%), Positives = 81/188 (43%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S + + ++ + V +AI + Q +DL N L IP F+ L L L H ++
Sbjct: 39 SRRHVACRHQNLTEVPNAIPELT--QRLDLRGNVLRVIPPAAFQDLPYLTHLDLRHCQVE 96
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V F GL L +LNL N L LP L L L+L N + + F L A
Sbjct: 97 LVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGA 156
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L L N L +P +F L L++ N + LA A GL L L L L
Sbjct: 157 LATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQ 216
Query: 317 NMMGHSMA 324
++ G +++
Sbjct: 217 SLPGLALS 224
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/177 (28%), Positives = 84/177 (47%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++RL L+ N ++ + +L ++L+HN LV +P F+ + LQL+HN L
Sbjct: 132 SLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNAL 191
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S + + GL +L+ L+L N L+ LP + L L+LG N + + L
Sbjct: 192 SVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGEEDGLALP 251
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
LR L L+ L+++ +F + L L + N L G G+L L L+G
Sbjct: 252 GLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLDALLPP--QGPGQLRRLQLQG 306
Score = 145 (56.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 58/208 (27%), Positives = 79/208 (37%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C E+ C+ L +P Q L L+ N V +A Q L +
Sbjct: 389 CPRACVCVPESRHSGCEARGLRAVPRGFPNDTQLLDLRRNHFPLVPRAAFQGLGRLVSLH 448
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNL-RGNFLEDLPD 224
L H + + L+ L L+ N LS ++ G L L L R FL+ +P
Sbjct: 449 LQHCGITELEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFLQ-VPG 507
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
L L L L N + R+ G ALR LYL N+L V + L +L
Sbjct: 508 AALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQELEKL 567
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLRG 312
+ N + A GL L L L G
Sbjct: 568 HLDRNQLPEVPTEALEGLPALLELQLSG 595
Score = 144 (55.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 43/139 (30%), Positives = 70/139 (50%)
Query: 136 PSIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L+ N + + + +L+ + LS N+L + P ++L +L L+ N+
Sbjct: 514 PSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQ 573
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSH-LEELDLGQNRISRIDQACFEG 253
L V + GL +L L L GN L L + F P+ L+ L L + + +I F G
Sbjct: 574 LPEVPTEALEGLPALLELQLSGNPLRALQEGAFRPVGRSLQHLFLNSSGLEQISPGAFSG 633
Query: 254 L-TALRILYLDDNQLRSVP 271
L L+ LYL NQL+++P
Sbjct: 634 LGPQLQSLYLQKNQLQALP 652
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 227 (85.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 58/163 (35%), Positives = 82/163 (50%)
Query: 148 IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLK 207
+ + S + ++S ++DLS N + +P L EL+L N L+ + F GL
Sbjct: 57 LSELPSNLSVFTS--YLDLSMNNISQLPPSPLHSLRFLEELRLAGNALTYIPKGAFAGLY 114
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
SLKVL L+ N L +P L L+ L L NRIS + +CF GL +LR L+LDDN L
Sbjct: 115 SLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNAL 174
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+P +F L L + + LN + D AF L L L L
Sbjct: 175 TEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHL 217
Score = 187 (70.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 57/178 (32%), Positives = 80/178 (44%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+Q L L NRI +V S SL+H+ L N L IP++ F L + L NK+
Sbjct: 139 SLQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKI 198
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + F L SL VL+L N + L + F L LE LDL N + A L+
Sbjct: 199 HHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAV-RTLS 257
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L N ++S+P +F+ L + N + AF L L L L GA
Sbjct: 258 NLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTLNGA 315
Score = 185 (70.2 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 54/166 (32%), Positives = 85/166 (51%)
Query: 137 SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L+L+ N ++ V + A+Q SLQ + L N++ ++P F L L L+ N L
Sbjct: 115 SLKVLMLQNNHLRQVPTEALQNLRSLQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNAL 174
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + + F L +L+ + L N + +PD F LS L L L NRI + + CF+GL
Sbjct: 175 TEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLH 234
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
+L L L+ N L PT + L L EL N ++ + AF G
Sbjct: 235 SLETLDLNYNNLDEFPT-AVRTLSNLKELGFHSNNIKSIPEKAFVG 279
Score = 155 (59.6 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 42/129 (32%), Positives = 68/129 (52%)
Query: 132 ITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+T S++ L L +I ++ + +LQ +DLS+N L ++P F +KL ++ L
Sbjct: 324 LTGTASLESLTLTGAQISSLPQTVCDQLPNLQVLDLSYNLLEDLP--SFSVCQKLQKIDL 381
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQAC 250
HN++ + TF L SL+ LNL N + + F+ L L +LDL NR+S I
Sbjct: 382 RHNEIYEIQADTFQQLFSLRSLNLAWNKIAIIDPNAFSTLPSLRKLDLSSNRLSSIPVTG 441
Query: 251 FEGLTALRI 259
GLT L++
Sbjct: 442 LHGLTHLKL 450
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 48/176 (27%), Positives = 81/176 (46%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S++ L L YN + +A++ S+L+ + N + +IP + F L+ + N +
Sbjct: 235 SLETLDLNYNNLDEFPTAVRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQ 294
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L+ L L G + + + PD + LE L L +IS + Q + L
Sbjct: 295 LVGRSAFQHLPELRTLTLNGASQITEFPD--LTGTASLESLTLTGAQISSLPQTVCDQLP 352
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN-VFTTLADGAFNGLGRLSALDL 310
L++L L N L +P SF L ++ + N ++ AD F L L +L+L
Sbjct: 353 NLQVLDLSYNLLEDLP--SFSVCQKLQKIDLRHNEIYEIQAD-TFQQLFSLRSLNL 405
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 38/107 (35%), Positives = 54/107 (50%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L+L N + LP L LEEL L N ++ I + F GL +L++L L +N LR VP
Sbjct: 71 LDLSMNNISQLPPSPLHSLRFLEELRLAGNALTYIPKGAFAGLYSLKVLMLQNNHLRQVP 130
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
T + L L LR+ N +++ F+GL L L L LT +
Sbjct: 131 TEALQNLRSLQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNALTEI 177
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 51/173 (29%), Positives = 81/173 (46%)
Query: 135 NPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNH 192
NPS+ + N I+ V SA Q L+ + L+ +Q+ P L L L
Sbjct: 280 NPSLITIHFYDNPIQLVGRSAFQHLPELRTLTLNGASQITEFP--DLTGTASLESLTLTG 337
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
++SS+ L +L+VL+L N LEDLP F+ L+++DL N I I F+
Sbjct: 338 AQISSLPQTVCDQLPNLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIQADTFQ 395
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
L +LR L L N++ + +F L L +L + N +++ +GL L
Sbjct: 396 QLFSLRSLNLAWNKIAIIDPNAFSTLPSLRKLDLSSNRLSSIPVTGLHGLTHL 448
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 224 (83.9 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 57/179 (31%), Positives = 96/179 (53%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L ++ N + + A + SL+H+ L++N+L N+P+R F+ L L L++N+L +
Sbjct: 82 LKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQ 141
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F +LK L L GN LE +P+ +F L L +L+LG N + + F+ L L++
Sbjct: 142 PAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQV 201
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L +N+L +P +F LG L EL + N TL+ G F+ L L L ++++
Sbjct: 202 LRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHL 260
Score = 201 (75.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 52/166 (31%), Positives = 85/166 (51%)
Query: 156 QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLR 215
Q +LQ + L N+L +IP+ F+ L EL L N++ +++ F ++L+ L L
Sbjct: 194 QHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLS 253
Query: 216 GNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
N + LP +F L HL +L L N + + F + LR L+L +N + S+P +F
Sbjct: 254 NNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAF 313
Query: 276 IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
+L L L + N + ++ GAFNGL L L L L ++ G+
Sbjct: 314 SHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGN 359
Score = 193 (73.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 47/153 (30%), Positives = 83/153 (54%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQF--YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
P + +L L N +K + + F +L+ + L +N + ++P F +L L L+HN
Sbjct: 269 PHLNKLTLFGNSLKELSPGV-FGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHN 327
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+LS ++ F GL +L+ L+L N L+DL +F L++L + L NR+ ++ + F
Sbjct: 328 QLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFAN 387
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
+ L + L +N L ++P F +LG L ELR+
Sbjct: 388 VNGLMTIQLQNNNLENLPLGIFDHLGNLCELRL 420
Score = 187 (70.9 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 54/165 (32%), Positives = 87/165 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ + + + +P F L+ L++ N+L+++ F L SL+ L+L N L++LP
Sbjct: 58 LQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLP 117
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
RLF +++LE L L N++ +I A F + L+ L L N L +P F +L L +
Sbjct: 118 VRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTK 177
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MGHSMALGD 327
L +G N FT L+ F LG L L L L+++ MG ALG+
Sbjct: 178 LNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGN 222
Score = 184 (69.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 55/184 (29%), Positives = 93/184 (50%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF--YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
+++ L+L N++ + A QF +S+L+ + L N L IP F+ L +L L +N
Sbjct: 126 NLETLLLSNNQLVQIQPA-QFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNG 184
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ ++ + F L +L+VL L N L D+P F L +L+EL L +N+I + F
Sbjct: 185 FTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNN 244
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L+ LYL +N + +P F+ L L +L + N L+ G F + L L L
Sbjct: 245 RNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNH 304
Query: 315 LTNM 318
+T++
Sbjct: 305 ITSL 308
Score = 181 (68.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 58/206 (28%), Positives = 94/206 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRL-VLKYNRIKTVDSAIQFYSSLQHVD 165
CP +C C+ + V C A + +P L + L +L + + + S+L +
Sbjct: 25 CPSECTCSRASQV-ECTGAQIVAMPSPLPWNAMSLQILNTHITELPEDKFLNISALIALK 83
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
+ N+L NI F L L L +NKL ++ + F + +L+ L L N L +
Sbjct: 84 MEKNELANIMPGAFRNLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPA 143
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F+ S+L+EL L N + I + F+ L L L L +N + F +LG L LR
Sbjct: 144 QFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLR 203
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLR 311
+ N + + G F+ LG L L L+
Sbjct: 204 LYENRLSDIPMGTFDALGNLQELALQ 229
Score = 179 (68.1 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 61/205 (29%), Positives = 98/205 (47%)
Query: 119 VVTCKEANLDVIPI-TLNP--SIQRLVLKYNRIKTVDSAIQFYSS--LQHVDLSHNQLVN 173
V+ E L IP+ T + ++Q L L+ N+I T+ + F+++ LQ + LS+N + +
Sbjct: 201 VLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGL-FHNNRNLQRLYLSNNHISH 259
Query: 174 IPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHL 233
+P F L +L L N L ++ F + +L+ L L N + LPD F+ L+ L
Sbjct: 260 LPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQL 319
Query: 234 EELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 293
+ L L N++S I F GLT LR L L N L+ + F L L + + N
Sbjct: 320 QVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQ 379
Query: 294 LADGAFNGLGRLSALDLRGAGLTNM 318
L F + L + L+ L N+
Sbjct: 380 LPGSIFANVNGLMTIQLQNNNLENL 404
Score = 178 (67.7 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 55/189 (29%), Positives = 83/189 (43%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L NR+ + +LQ + L NQ+ + F L L L++N +
Sbjct: 198 NLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHI 257
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S + F+ L L L L GN L++L +F P+ +L EL L N I+ + F L
Sbjct: 258 SHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLN 317
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L++L L NQL + +F L L EL + N L F L L + L+ L
Sbjct: 318 QLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRL 377
Query: 316 TNMMGHSMA 324
+ G A
Sbjct: 378 RQLPGSIFA 386
Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P+++ L L N I ++ D+A + LQ + LSHNQL I F L EL L+ N
Sbjct: 293 PNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNA 352
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ F L +L+ ++L+ N L LP +FA ++ L + L N + + F+ L
Sbjct: 353 LQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIFDHL 412
Query: 255 TALRILYLDDNQLR 268
L L L DN R
Sbjct: 413 GNLCELRLYDNPWR 426
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 57/203 (28%), Positives = 95/203 (46%)
Query: 112 DCND-ETLVVTCKEANLDVIPITLNP--SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLS 167
D N+ ETL+++ + + + P + +++ L L N ++ + + L ++L
Sbjct: 123 DVNNLETLLLSNNQL-VQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLG 181
Query: 168 HNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLF 227
+N ++ R F+ L L+L N+LS + TF L +L+ L L+ N + L LF
Sbjct: 182 NNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLF 241
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
+L+ L L N IS + F L L L L N L+ + F + L EL +
Sbjct: 242 HNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLY 301
Query: 288 LNVFTTLADGAFNGLGRLSALDL 310
N T+L D AF+ L +L L L
Sbjct: 302 NNHITSLPDNAFSHLNQLQVLIL 324
Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 33/133 (24%), Positives = 61/133 (45%)
Query: 186 VELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISR 245
+ LQ+ + ++ + F+ + +L L + N L ++ F L L L L N++
Sbjct: 56 MSLQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKN 115
Query: 246 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
+ F+ + L L L +NQL + F L EL++ N + +G F+ L L
Sbjct: 116 LPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGL 175
Query: 306 SALDLRGAGLTNM 318
+ L+L G T++
Sbjct: 176 TKLNLGNNGFTHL 188
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 226 (84.6 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 57/153 (37%), Positives = 78/153 (50%)
Query: 169 NQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFA 228
N + +P F+ L EL+L N LS ++ K GLK LKVL L+ N L+ +P
Sbjct: 2 NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIR 61
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 288
LS L+ L L N I+ + + FEGLT LR L+LDDN L VP L L L + L
Sbjct: 62 GLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLAL 121
Query: 289 NVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
N +++ D AF L L L L + ++ H
Sbjct: 122 NKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQH 154
Score = 211 (79.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 64/183 (34%), Positives = 93/183 (50%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N++KTV S AI+ S+LQ + L N + ++P FE +L L L+ N L+ V
Sbjct: 45 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVP 104
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ L +L+ L L N + +PD F LS L L L N+I + Q CF+GL L
Sbjct: 105 VQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLET 164
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L+ N L P + L L EL N + + DGAF+G L + L L+ +
Sbjct: 165 LDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS-FV 222
Query: 320 GHS 322
G+S
Sbjct: 223 GNS 225
Score = 203 (76.5 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 60/204 (29%), Positives = 99/204 (48%)
Query: 116 ETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQL 171
E V+T + L +P I ++Q L L N I +V + + + + L+H+ L N L
Sbjct: 41 ELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSL 100
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+P++ L L L NK+SS+ + F L SL VL+L N ++ L F L
Sbjct: 101 TEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLD 160
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
+LE LDL N + QA + L +L+ L N + +P +F +L + + N
Sbjct: 161 NLETLDLNYNNLGEFPQA-IKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPL 219
Query: 292 TTLADGAFNGLGRLSALDLRGAGL 315
+ + + AF+ L L +L +RGA +
Sbjct: 220 SFVGNSAFHNLSDLHSLVIRGASM 243
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 52/172 (30%), Positives = 82/172 (47%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
NP ++ + L N + V +SA S L + + +V L L L
Sbjct: 206 NPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ-RFPNLTGTVHLESLTLTGT 264
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
K+SS+++ K L+ L+L N ++DLP F LEE+ L +N+I +I + F+G
Sbjct: 265 KISSISSNLCQEQKMLRTLDLSYNNIKDLPS--FNGCYALEEISLQRNQIHQIKEGTFQG 322
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
LT+LRIL L N + + +F LG + L + N T+ NGL +L
Sbjct: 323 LTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTSFPTEGLNGLNQL 374
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 152 DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKV 211
+ A + + L+ + L+ N L I + ++L L L +N+L +V ++ GL +L+
Sbjct: 9 EDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQS 68
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L L N + +P+ F L+ L L L N ++ + L L+ L L N++ S+P
Sbjct: 69 LRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIP 128
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+F L L L + N +L F+GL L LDL
Sbjct: 129 DFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDL 167
Score = 157 (60.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 52/175 (29%), Positives = 78/175 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ SL+ + N + IP F+ L + L N LS
Sbjct: 161 NLETLDLNYNNLGEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 220
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V N F L L L +RG + ++ P+ HLE L L +IS I +
Sbjct: 221 FVGNSAFHNLSDLHSLVIRGASMVQRFPN--LTGTVHLESLTLTGTKISSISSNLCQEQK 278
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N ++ +P+ + Y L E+ + N + +G F GL L LDL
Sbjct: 279 MLRTLDLSYNNIKDLPSFNGCYA--LEEISLQRNQIHQIKEGTFQGLTSLRILDL 331
Score = 156 (60.0 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L N + + A+ L+ + L +NQL +P L L+L+ N
Sbjct: 16 PFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANH 75
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++SV +F GL L+ L L N L ++P + + L L+ L L N+IS I F L
Sbjct: 76 ITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNL 135
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
++L +L+L +N+++S+ F L L L + N
Sbjct: 136 SSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYN 170
Score = 155 (59.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 36/124 (29%), Positives = 65/124 (52%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L +I ++ S + Q L+ +DLS+N + ++P F L E+ L N++
Sbjct: 256 LESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIKDLP--SFNGCYALEEISLQRNQIH 313
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL SL++L+L N + ++ DR FA L + LD+ N ++ GL
Sbjct: 314 QIKEGTFQGLTSLRILDLSRNLIHEIHDRAFAKLGSITNLDISFNELTSFPTEGLNGLNQ 373
Query: 257 LRIL 260
L+++
Sbjct: 374 LKLV 377
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 224 (83.9 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 68/216 (31%), Positives = 105/216 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C+C+ + V+C L IP + + L L NR+K+V+ +F Y L+ +
Sbjct: 28 CPARCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNPE-EFISYPLLEEI 86
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS N + N+ F L L+L N+L V F GL +L L++ N + L D
Sbjct: 87 DLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLD 146
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
+F L +L+ L++G N + I F GL +L L L+ L +VPT + +L L L
Sbjct: 147 YMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISL 206
Query: 285 RVG-LNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
+ LN+ + AF L L L++ L +MM
Sbjct: 207 HLKHLNI-NNMPVYAFKRLFHLKHLEIDYWPLLDMM 241
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 56/206 (27%), Positives = 97/206 (47%)
Query: 123 KEANLDVIPI---TLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRG 178
K L ++P+ T ++ +L + N+I + D Q +L+ +++ N LV I R
Sbjct: 113 KGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 179 FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDL 238
F L +L L L++V + L+SL L+L+ + ++P F L HL+ L++
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEI 232
Query: 239 GQNRISRIDQACFEGLTALRI--LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 296
+ +D L L + L + + L +VP +F +L L L + N +T+
Sbjct: 233 DYWPL--LDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEA 290
Query: 297 GAFNGLGRLSALDLRGAGLTNMMGHS 322
G F+ L RL L + GA L + HS
Sbjct: 291 GMFSDLIRLQELHIVGAQLRTIEPHS 316
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 52/178 (29%), Positives = 81/178 (45%)
Query: 137 SIQRLVL-KYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+++L L K N A+ SL + L H + N+P+ F+ L L++++ L
Sbjct: 178 SLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPL 237
Query: 196 SSV---NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
+ N+ + L SL V N L +P F L +L L+L N IS I+ F
Sbjct: 238 LDMMPANSLYGLNLTSLSVTNTN---LSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFS 294
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L+ L++ QLR++ SF L L L V N+ TL + F+ L L +
Sbjct: 295 DLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSI 352
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 49/175 (28%), Positives = 82/175 (46%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L LK NR+K V + S+L +D+S N++V + F+ L L++ N L
Sbjct: 106 NLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDL 165
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++++ F GL SL+ L L L +P + L L L L I+ + F+ L
Sbjct: 166 VYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLF 225
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L +D L + + +Y L L V +T+ AF L L+ L+L
Sbjct: 226 HLKHLEIDYWPLLDMMPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNL 280
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 223 (83.6 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 56/171 (32%), Positives = 92/171 (53%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L ++ N + T+ A + SL+++ L++N+L +PIR F+ L L L++N+L +
Sbjct: 82 LKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQ 141
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F +L+ L L GN LE +P+ F L L +L+LG+N + + F+ L L++
Sbjct: 142 PAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQV 201
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L +N+L +P +F LG L EL + N TL+ G F+ L L L
Sbjct: 202 LRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYL 252
Score = 205 (77.2 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 61/169 (36%), Positives = 91/169 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
SLQ V+ +H + +P F L+ L++ N+LS++ F L SL+ L+L N L
Sbjct: 57 SLQVVN-TH--ITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKL 113
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
LP R+F +++LE L L N++ +I A F + LR L L N L S+P +F +L
Sbjct: 114 RMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLV 173
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MGHSMALGD 327
L +L +G N FT L+ F LG L L L L+++ MG ALG+
Sbjct: 174 GLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGN 222
Score = 199 (75.1 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 55/190 (28%), Positives = 96/190 (50%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF--YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
+++ L+L N++ + A QF +S+L+ + L N L +IP F+ L +L L N
Sbjct: 126 NLESLLLSNNQLVQIQPA-QFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNS 184
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ ++ + F L +L+VL L N L D+P F L +L+EL L +N+I + F
Sbjct: 185 FTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNN 244
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L+ LYL +N + +P F+ L L +L + N L+ G F + L L L
Sbjct: 245 RNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNH 304
Query: 315 LTNMMGHSMA 324
+T++ ++ +
Sbjct: 305 ITSLADNTFS 314
Score = 192 (72.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 61/183 (33%), Positives = 91/183 (49%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L N+++ + + Q ++L+ + LS+NQLV I F L ELQL+ N L
Sbjct: 102 SLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNL 161
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S+ + F L L LNL N L RLF L +L+ L L +NR+S I F+ L
Sbjct: 162 ESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALG 221
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L+ L L +NQ+ ++ F L L + N + L G F L +L+ L L G L
Sbjct: 222 NLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSL 281
Query: 316 TNM 318
+
Sbjct: 282 REL 284
Score = 186 (70.5 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 50/163 (30%), Positives = 81/163 (49%)
Query: 156 QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLR 215
Q +LQ + L N+L +IP+ F+ L EL L N++ +++ F ++L+ L L
Sbjct: 194 QHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLS 253
Query: 216 GNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
N + LP +F L L +L L N + + F + LR L+L +N + S+ +F
Sbjct: 254 NNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTF 313
Query: 276 IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+L L L + N T ++ GAFNGL L L L L ++
Sbjct: 314 SHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDL 356
Score = 181 (68.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 55/189 (29%), Positives = 82/189 (43%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L NR+ + +LQ + L NQ+ + F L L L++N +
Sbjct: 198 NLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHI 257
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S + F+ L L L L GN L +L +F P+ +L EL L N I+ + F L
Sbjct: 258 SQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLN 317
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L++L L NQL + +F L L EL + N L F L L + L+ L
Sbjct: 318 QLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRL 377
Query: 316 TNMMGHSMA 324
+ G A
Sbjct: 378 RQLPGSIFA 386
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 59/205 (28%), Positives = 99/205 (48%)
Query: 119 VVTCKEANLDVIPI-TLNP--SIQRLVLKYNRIKTVDSAIQFYSS--LQHVDLSHNQLVN 173
V+ E L IP+ T + ++Q L L+ N+I T+ + F+++ LQ + LS+N +
Sbjct: 201 VLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGL-FHNNRNLQRLYLSNNHISQ 259
Query: 174 IPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHL 233
+P F +L +L L N L ++ F + +L+ L L N + L D F+ L+ L
Sbjct: 260 LPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQL 319
Query: 234 EELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 293
+ L L N+++ I F GLT LR L L N L+ + + F L L + + N
Sbjct: 320 QVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQ 379
Query: 294 LADGAFNGLGRLSALDLRGAGLTNM 318
L F + L+ + L+ L N+
Sbjct: 380 LPGSIFANVNGLTTIQLQNNNLENL 404
Score = 173 (66.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 43/153 (28%), Positives = 82/153 (53%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQF--YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
P + +L L N ++ + + F +L+ + L +N + ++ F +L L L+HN
Sbjct: 269 PQLNKLTLFGNSLRELSPGV-FGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHN 327
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+L+ ++ F GL +L+ L+L N L+DL +F L++L+ + L NR+ ++ + F
Sbjct: 328 QLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFAN 387
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
+ L + L +N L ++P F +L L ELR+
Sbjct: 388 VNGLTTIQLQNNNLENLPLGIFDHLVNLCELRL 420
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 57/206 (27%), Positives = 90/206 (43%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVD 165
CP +C C+ + V C A + +P L + L + I + ++ S+L +
Sbjct: 25 CPSECTCSRASQV-ECTGARIVAMPTPLPWNAMSLQVVNTHITELPENLFLNISALIALK 83
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
+ N+L I F L L L +NKL + + F + +L+ L L N L +
Sbjct: 84 MEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPA 143
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F+ S+L EL L N + I + F+ L L L L N + F +LG L LR
Sbjct: 144 QFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLR 203
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLR 311
+ N + + G F+ LG L L L+
Sbjct: 204 LHENRLSDIPMGTFDALGNLQELALQ 229
Score = 162 (62.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L N ++++ + A L ++L N ++ R F+ L L+L+ N+L
Sbjct: 150 NLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRL 209
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S + TF L +L+ L L+ N + L LF +L+ L L N IS++ F L
Sbjct: 210 SDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLP 269
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N LR + F + L EL + N T+LAD F+ L +L L L L
Sbjct: 270 QLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQL 329
Query: 316 T 316
T
Sbjct: 330 T 330
Score = 155 (59.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P+++ L L N I ++ D+ + LQ + LSHNQL I F L EL L+ N
Sbjct: 293 PNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNA 352
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L +++ F L +L+ ++L+ N L LP +FA ++ L + L N + + F+ L
Sbjct: 353 LQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHL 412
Query: 255 TALRILYLDDNQLR 268
L L L DN R
Sbjct: 413 VNLCELRLYDNPWR 426
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 226 (84.6 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 69/215 (32%), Positives = 105/215 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQR-LVLKYNRIKTVDSA-IQFYSSLQHV 164
C C C ++L C L +P L PS R L L YNR+ +DSA + ++LQ V
Sbjct: 43 CAAACTCAGDSL--DCSGRGLATLPRDL-PSWTRSLNLSYNRLSEIDSAAFEDLTNLQEV 99
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L+ N+L IP G +V L L HNK+ SV+ SL+VL+L N + ++
Sbjct: 100 YLNSNELTAIPSLG-AASIGVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRS 158
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLT-ALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F + EL+L NRIS ++ F+GL+ +L L L N++ +P +F L L +
Sbjct: 159 SCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAF-KLPRLTQ 217
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L + N + F GL L L L+ ++ +
Sbjct: 218 LDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRL 252
Score = 204 (76.9 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 60/192 (31%), Positives = 95/192 (49%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L++N+I +VD S ++ Y SL+ +DLS N + I F ++ EL L N++S +
Sbjct: 122 LFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILE 181
Query: 200 NKTFIGL-KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
+ F GL +SL L L N + LP + F L L +LDL +NRI I+ F+GL +L
Sbjct: 182 SGAFDGLSRSLLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRNRIRLIEGLTFQGLDSLE 240
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+L L N + + +F L + L + N + G+ GL L L L ++ +
Sbjct: 241 VLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRI 300
Query: 319 MGHSMALGDYLH 330
+ LH
Sbjct: 301 QRDGWSFCQKLH 312
Score = 177 (67.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 56/177 (31%), Positives = 83/177 (46%)
Query: 134 LNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
L+ S+ L L NRI + L +DL+ N++ I F+ + L L+L N
Sbjct: 188 LSRSLLTLRLSKNRITQLPVKAFKLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRN 247
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+S + + F GL + VL+L N L ++ L+ L +L L N ISRI + +
Sbjct: 248 NISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSF 307
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L L N L + S L L+ LR+ N + +A+GAF GL L LDL
Sbjct: 308 CQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDL 364
Score = 169 (64.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + +L L NRI+ ++ Q SL+ + L N + + F K+ L L +N
Sbjct: 213 PRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNS 272
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L VN+ + GL +L L+L N + + ++ L EL L N ++R+D+ L
Sbjct: 273 LVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAEL 332
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT-TLAD--GAFNGLGRLSALDLR 311
++L IL L N + + +F L L L + N + T+ D GAF GL LS L L
Sbjct: 333 SSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLF 392
Query: 312 G 312
G
Sbjct: 393 G 393
Score = 167 (63.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 55/178 (30%), Positives = 88/178 (49%)
Query: 137 SIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L+ N I + D A S + + L +N LV + L +L L++N +
Sbjct: 238 SLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSI 297
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S + + + L L L N L L + A LS L L L N IS I + F+GL
Sbjct: 298 SRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLK 357
Query: 256 ALRILYLDDNQLR-SVPTPSFIYLGM--LAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+LR+L LD N++ ++ S + G+ L++L + N ++A AF+GL L L+L
Sbjct: 358 SLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNL 415
Score = 166 (63.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 54/172 (31%), Positives = 84/172 (48%)
Query: 141 LVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+YN + V+S + ++L + LS+N + I G+ +KL EL L+ N L+ ++
Sbjct: 266 LHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLD 325
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS-RIDQA--CFEGLTA 256
++ L SL +L L N + + + F L L LDL N IS I+ F GL
Sbjct: 326 EESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDN 385
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L L L N+++SV +F L L L +G N ++ AF + L L
Sbjct: 386 LSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDAFAKMKNLKEL 437
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 42/129 (32%), Positives = 68/129 (52%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ L+L +N + +D ++ SSL + LSHN + +I F+ + L L L+HN++S
Sbjct: 311 LHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEIS 370
Query: 197 SVNNKT---FIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
T F GL +L L L GN ++ + R F+ L LE L+LG+N I + F
Sbjct: 371 GTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDAFAK 430
Query: 254 LTALRILYL 262
+ L+ LY+
Sbjct: 431 MKNLKELYI 439
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 52/191 (27%), Positives = 93/191 (48%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQ--HVDLSHNQLVNIPIRGFEPQEK-LVELQLNHN 193
S++ L L N I + S+ F + L+ ++L+ N++ + F+ + L+ L+L+ N
Sbjct: 142 SLEVLDLSSNNITEIRSSC-FPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKN 200
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+++ + K F L L L+L N + + F L LE L L +N ISR+ F G
Sbjct: 201 RITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWG 259
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ + +L+L+ N L V + S L L +L + N + + ++ +L L L
Sbjct: 260 LSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFN 319
Query: 314 GLTNMMGHSMA 324
LT + S+A
Sbjct: 320 NLTRLDEESLA 330
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 222 (83.2 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 63/173 (36%), Positives = 89/173 (51%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N+I TV + A Q L+ + LS N++ +P F L L L+ N+LSS++
Sbjct: 90 LHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLH 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ F GL+ L+ L+LR N L +P RLF LE LDL NR+ + + F GL LR
Sbjct: 150 PELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ NQL + F+ L L L + N + L G L LDL G
Sbjct: 210 LHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTG 262
Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 68/214 (31%), Positives = 97/214 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CPP C C E L+ C +P + L L++N I ++ QF +S L +
Sbjct: 34 CPPKCRC--EKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITALERD-QFASFSQLTWL 90
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L HNQ+ + F+ KL EL L+ NK+ + N TF L +L+ L+L N L L
Sbjct: 91 HLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHP 150
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
LF L L+ L L N + I F +L L L N+LRS+ F L L EL
Sbjct: 151 ELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLREL 210
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N T + F L L L L+ ++N+
Sbjct: 211 HLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL 244
Score = 198 (74.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 57/168 (33%), Positives = 81/168 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L HN + + F +L L L+HN++S+V F GL LK L L N + LP
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L +L+ LDL N++S + F GL L+ L+L N LR++P F L
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MGHSMALGDYLH 330
L + N +LA F GL +L L L LT + H + L LH
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSS-LH 232
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 56/154 (36%), Positives = 85/154 (55%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+Q L L+ N ++T+ + F+ SL+ +DLS N+L ++ GF KL EL L HN+L
Sbjct: 159 LQTLHLRSNSLRTIPVRL-FWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQL 217
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ +N F+ L SL L L+ N + +L + S LE+LDL N I ID FE +
Sbjct: 218 TKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMP 277
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
L+IL +D+N+L S+ + L L VGL+
Sbjct: 278 NLKILLMDNNKLNSLDSKILSSLRSLTT--VGLS 309
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 32/98 (32%), Positives = 58/98 (59%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ L L++N+I + +++ +S+L+ +DL+ N++ I + FE L L +++NKL
Sbjct: 230 SLHTLFLQWNKISNLTCGMEWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKL 289
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHL 233
+S+++K L+SL + L GN E P R+ A S L
Sbjct: 290 NSLDSKILSSLRSLTTVGLSGNLWECSP-RVCALASWL 326
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 222 (83.2 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 63/173 (36%), Positives = 89/173 (51%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N+I TV + A Q L+ + LS N++ +P F L L L+ N+LSS++
Sbjct: 90 LHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLH 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ F GL+ L+ L+LR N L +P RLF LE LDL NR+ + + F GL LR
Sbjct: 150 PELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ NQL + F+ L L L + N + L G L LDL G
Sbjct: 210 LHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTG 262
Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 68/214 (31%), Positives = 97/214 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CPP C C E L+ C +P + L L++N I ++ QF +S L +
Sbjct: 34 CPPKCRC--EKLLFYCDSQGFHSVPNATDKGSLGLSLRHNHITALERD-QFASFSQLTWL 90
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L HNQ+ + F+ KL EL L+ NK+ + N TF L +L+ L+L N L L
Sbjct: 91 HLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHP 150
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
LF L L+ L L N + I F +L L L N+LRS+ F L L EL
Sbjct: 151 ELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLREL 210
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N T + F L L L L+ ++N+
Sbjct: 211 HLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL 244
Score = 198 (74.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 57/168 (33%), Positives = 81/168 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L HN + + F +L L L+HN++S+V F GL LK L L N + LP
Sbjct: 66 LSLRHNHITALERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L +L+ LDL N++S + F GL L+ L+L N LR++P F L
Sbjct: 126 NTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MGHSMALGDYLH 330
L + N +LA F GL +L L L LT + H + L LH
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSS-LH 232
Score = 191 (72.3 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 51/135 (37%), Positives = 78/135 (57%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+Q L L+ N ++T+ + F+ SL+ +DLS N+L ++ GF KL EL L HN+L
Sbjct: 159 LQTLHLRSNSLRTIPVRL-FWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQL 217
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ +N F+ L SL L L+ N + +L + S LE+LDL N I ID FE +
Sbjct: 218 TKINFAHFLRLSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMP 277
Query: 256 ALRILYLDDNQLRSV 270
L+IL +D+N+L S+
Sbjct: 278 NLKILLMDNNKLNSL 292
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 33/98 (33%), Positives = 57/98 (58%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ L L++N+I + + + +S+L+ +DL+ N++ I + FE L L +++NKL
Sbjct: 230 SLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTVFETMPNLKILLMDNNKL 289
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHL 233
+S+++K LKSL + L GN E P R+ A S L
Sbjct: 290 NSLDSKILNSLKSLTTVGLSGNLWECSP-RVCALASWL 326
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 222 (83.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 62/173 (35%), Positives = 90/173 (52%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N+I TV + + Q L+ + LS N++ ++P F L L L+ N+LSS++
Sbjct: 95 LHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLH 154
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ GL+ L+ L+LR N L +P RLF LE LDL NR+ + + F GL LR
Sbjct: 155 PELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRE 214
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ NQL + F+ L L L + N + L G G L LDL G
Sbjct: 215 LHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTG 267
Score = 207 (77.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 68/214 (31%), Positives = 96/214 (44%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CPP C C E L+ C +P T L L++N I ++ QF +S L +
Sbjct: 39 CPPKCRC--EKLLFYCDSQGFHSVPNTTEKGSLGLSLRHNFITELERD-QFASFSQLTWL 95
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L HNQ+ + F+ KL EL L+ NK+ + N TF L +L+ L+L N L L
Sbjct: 96 HLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHP 155
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
L L L+ L L N + I F +L L L N+LRS+ F L L EL
Sbjct: 156 ELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLREL 215
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N T + F L L L L+ ++N+
Sbjct: 216 HLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNL 249
Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/168 (32%), Positives = 82/168 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L HN + + F +L L L+HN++++V +F GL LK L L N + LP
Sbjct: 71 LSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLP 130
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ L +L+ LDL N++S + GL L+ L+L N LR++P F L
Sbjct: 131 NTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 190
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MGHSMALGDYLH 330
L + N +LA F GL +L L L LT + H + L LH
Sbjct: 191 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSS-LH 237
Score = 181 (68.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 61/175 (34%), Positives = 90/175 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+Q L L+ N ++T+ + F+ SL+ +DLS N+L ++ GF KL EL L HN+L
Sbjct: 164 LQTLHLRSNSLRTIPVRL-FWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQL 222
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ +N F+ L SL L L+ N + +L + LE+LDL N I ID FE +
Sbjct: 223 TKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNDIKAIDLTVFETMP 282
Query: 256 ALRILYLDDNQL--------RSVPTPSFIYL-GMLAELRVGLNVFTTLADGAFNG 301
L+ L LD+N+L RS+P+ S + L G L E + GAF G
Sbjct: 283 NLKTLLLDNNKLSTLDSKILRSLPSLSTVGLSGNLWECSARICALAAWL-GAFRG 336
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/177 (28%), Positives = 78/177 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L +N++ ++ + + LQ + L N L IP+R F L L L+ N+L
Sbjct: 139 NLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRL 198
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S+ F GL L+ L+L N L + F LS L L L N+IS +
Sbjct: 199 RSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWG 258
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L L L N ++++ F + L L + N +TL L LS + L G
Sbjct: 259 TLEKLDLTGNDIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSLPSLSTVGLSG 315
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 224 (83.9 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 66/210 (31%), Positives = 104/210 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQ 162
A++ CP C C+++ V C +L+ +P ++ + + L L+ N I+ + S + L+
Sbjct: 36 AASTCPAVCSCSNQASRVICARQHLEEVPDNISNNTRYLNLQENTIQVIKS--DTFKHLR 93
Query: 163 HVD---LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
H++ LS NQ+ I + F L L+L N+L+ V ++ F L L+ L LR N +
Sbjct: 94 HLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPI 153
Query: 220 EDLPDRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
E LP F + L LDLG+ ++ I A F GL LR L L L+ +P + L
Sbjct: 154 ETLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLRYLNLGMCGLKDIP--NLTPL 211
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L EL + N + G+F GL L L
Sbjct: 212 VRLEELELSGNRLEIIRPGSFQGLESLRKL 241
Score = 195 (73.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 58/177 (32%), Positives = 90/177 (50%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH-N 193
P++ L L NR+ V S A ++ S L+ + L +N + +P F L L L
Sbjct: 117 PNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELK 176
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
KL +++ F+GL +L+ LNL L+D+P+ PL LEEL+L NR+ I F+G
Sbjct: 177 KLDYISDAAFVGLINLRYLNLGMCGLKDIPN--LTPLVRLEELELSGNRLEIIRPGSFQG 234
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +LR L+L +Q+ + +F L L EL + N +L F L +L + L
Sbjct: 235 LESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHL 291
Score = 154 (59.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 40/101 (39%), Positives = 55/101 (54%)
Query: 210 KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS 269
+ LNL+ N ++ + F L HLE L L +N+I +I+ F GL L L L DN+L
Sbjct: 72 RYLNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTL 131
Query: 270 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
VP+ +F YL L EL + N TL AF+ + L LDL
Sbjct: 132 VPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDL 172
Score = 147 (56.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + + TF L+ L++L L N + + F L +L L+L NR++ +
Sbjct: 74 LNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVP 133
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + ++P +F + L L +G L ++D AF GL L
Sbjct: 134 SQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLR 193
Query: 307 ALDLRGAGLTNM 318
L+L GL ++
Sbjct: 194 YLNLGMCGLKDI 205
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS N+L I F+ E L +L L H+++S + F LK+L+ LNL N L
Sbjct: 214 LEELELSGNRLEIIRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLH 273
Query: 221 DLPDRLFAPLSHLEELDLGQN 241
LP LF PL LE + L N
Sbjct: 274 SLPHDLFTPLQKLERVHLNHN 294
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 225 (84.3 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 59/163 (36%), Positives = 83/163 (50%)
Query: 148 IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLK 207
+ + S + ++S ++DLS N + +P L EL+L N L+ + F GL
Sbjct: 57 LSELPSNLSVFTS--YLDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLH 114
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
SLKVL L+ N L +P+ L L+ L L N IS + +CF GL +LR L+LDDN L
Sbjct: 115 SLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
VP +F L L + + LN +AD AF L L L L
Sbjct: 175 TDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHL 217
Score = 181 (68.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 56/178 (31%), Positives = 80/178 (44%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+Q L L N I V S SL+H+ L N L ++P++ F L + L NK+
Sbjct: 139 SLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKI 198
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + F L SL VL+L N + L + F L LE LDL N + A + L+
Sbjct: 199 HHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTA-IKTLS 257
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L N +RS+P +F+ L + N + AF L L L L GA
Sbjct: 258 NLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGA 315
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 54/166 (32%), Positives = 83/166 (50%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L+L+ N+++ V + A+Q SLQ + L N + +P F L L L+ N L
Sbjct: 115 SLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ V + F L +L+ + L N + + D F LS L L L NRI + + CF+GL
Sbjct: 175 TDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLH 234
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
+L L L+ N L PT + L L EL N ++ + AF G
Sbjct: 235 SLETLDLNYNNLDEFPT-AIKTLSNLKELGFHSNNIRSIPERAFVG 279
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/107 (36%), Positives = 55/107 (51%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L+L N + LP L L LEEL L N ++ I + F GL +L++L L +NQLR VP
Sbjct: 71 LDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVP 130
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ L L LR+ N + + F+GL L L L LT++
Sbjct: 131 EEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDV 177
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 42/146 (28%), Positives = 75/146 (51%)
Query: 132 ITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+T +++ L L +I ++ A+ +LQ +DLS+N L ++P +KL ++ L
Sbjct: 324 LTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLLEDLP--SLSGCQKLQKIDL 381
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQAC 250
HN++ + TF L +L+ LNL N + + F+ L L +LDL N +S
Sbjct: 382 RHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTG 441
Query: 251 FEGLTALRILYLDDNQLRS-VPTPSF 275
GLT L++ + L+S +P+ +F
Sbjct: 442 LHGLTHLKLT--GNRALQSLIPSANF 465
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S++ L L YN + +AI+ S+L+ + N + +IP R F L+ + N +
Sbjct: 235 SLETLDLNYNNLDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQ 294
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L+ L L G + + + P + LE L L +IS + QA + L
Sbjct: 295 FVGVSAFQHLPELRTLTLNGASHITEFPH--LTGTATLESLTLTGAKISSLPQAVCDQLP 352
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L++L L N L +P+ S +LR N + F L L +L+L
Sbjct: 353 NLQVLDLSYNLLEDLPSLSGCQKLQKIDLRH--NEIYEIKGSTFQQLFNLRSLNL 405
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 51/174 (29%), Positives = 81/174 (46%)
Query: 135 NPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSH-NQLVNIP-IRGFEPQEKLVELQLN 191
NPS+ + N I+ V SA Q L+ + L+ + + P + G E L L
Sbjct: 280 NPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEFPHLTGTATLESLT---LT 336
Query: 192 HNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACF 251
K+SS+ L +L+VL+L N LEDLP + L+++DL N I I + F
Sbjct: 337 GAKISSLPQAVCDQLPNLQVLDLSYNLLEDLPS--LSGCQKLQKIDLRHNEIYEIKGSTF 394
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
+ L LR L L N++ + +F L L +L + N+ ++ +GL L
Sbjct: 395 QQLFNLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPVTGLHGLTHL 448
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 223 (83.6 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/211 (31%), Positives = 102/211 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C L +P ++ + + L L+ N I+ + + + L+H++
Sbjct: 59 CPAACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQVIRT--DTFKHLRHLEI 116
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I + F L L+L N+L++V + F L L+ L LR N +E +P
Sbjct: 117 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 176
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+ I +A FEGL LR L L L+ +P + L L
Sbjct: 177 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTALVRLE 234
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
EL + N + G+F GL L L L A
Sbjct: 235 ELELSGNRLDLIRPGSFQGLTSLRKLWLMHA 265
Score = 199 (75.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 61/177 (34%), Positives = 90/177 (50%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L NR+ TV + A ++ S L+ + L +N + +IP F L L L K
Sbjct: 136 PSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 195
Query: 195 -LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L ++ F GL +L+ LNL L+D+P+ L LEEL+L NR+ I F+G
Sbjct: 196 RLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQG 253
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LT+LR L+L Q+ ++ +F L L EL + N +L F L RL + L
Sbjct: 254 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 310
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + TF L+ L++L L N + + F L L L+L NR++ +
Sbjct: 93 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 152
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L +++ AF GL L
Sbjct: 153 TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLR 212
Query: 307 ALDLRGAGLTNM 318
L+L G+ N+
Sbjct: 213 YLNL---GMCNL 221
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N ++ ++ A SL ++L N+L +P + FE KL EL L +N +
Sbjct: 114 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 173
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL+ L+L G LE + + F L +L L+LG + I L
Sbjct: 174 SIPSYAFNRVPSLRRLDL-GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 230
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L N+L + SF L L +L + T+ AF+ L L L+L
Sbjct: 231 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 290
Query: 315 LTNM 318
L ++
Sbjct: 291 LMSL 294
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS N+L I F+ L +L L H +++++ F LKSL+ LNL N L
Sbjct: 233 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM 292
Query: 221 DLPDRLFAPLSHLEELDLGQN 241
LP LF PL LE + L N
Sbjct: 293 SLPHDLFTPLHRLERVHLNHN 313
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 49/154 (31%), Positives = 72/154 (46%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N I+++ S A SL+ +DL +L I FE L L L L
Sbjct: 162 LRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL 221
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ N T L L+ L L GN L+ + F L+ L +L L +++ I++ F+ L
Sbjct: 222 KDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLK 279
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+L L L N L S+P F L L RV LN
Sbjct: 280 SLEELNLSHNNLMSLPHDLFTPLHRLE--RVHLN 311
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 223 (83.6 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/211 (31%), Positives = 102/211 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C L +P ++ + + L L+ N I+ + + + L+H++
Sbjct: 59 CPAACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQVIRT--DTFKHLRHLEI 116
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I + F L L+L N+L++V + F L L+ L LR N +E +P
Sbjct: 117 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 176
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+ I +A FEGL LR L L L+ +P + L L
Sbjct: 177 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTALVRLE 234
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
EL + N + G+F GL L L L A
Sbjct: 235 ELELSGNRLDLIRPGSFQGLTSLRKLWLMHA 265
Score = 199 (75.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 61/177 (34%), Positives = 90/177 (50%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L NR+ TV + A ++ S L+ + L +N + +IP F L L L K
Sbjct: 136 PSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 195
Query: 195 -LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L ++ F GL +L+ LNL L+D+P+ L LEEL+L NR+ I F+G
Sbjct: 196 RLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQG 253
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LT+LR L+L Q+ ++ +F L L EL + N +L F L RL + L
Sbjct: 254 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 310
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + TF L+ L++L L N + + F L L L+L NR++ +
Sbjct: 93 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 152
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L +++ AF GL L
Sbjct: 153 TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLR 212
Query: 307 ALDLRGAGLTNM 318
L+L G+ N+
Sbjct: 213 YLNL---GMCNL 221
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N ++ ++ A SL ++L N+L +P + FE KL EL L +N +
Sbjct: 114 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 173
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL+ L+L G LE + + F L +L L+LG + I L
Sbjct: 174 SIPSYAFNRVPSLRRLDL-GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 230
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L N+L + SF L L +L + T+ AF+ L L L+L
Sbjct: 231 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 290
Query: 315 LTNM 318
L ++
Sbjct: 291 LMSL 294
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS N+L I F+ L +L L H +++++ F LKSL+ LNL N L
Sbjct: 233 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM 292
Query: 221 DLPDRLFAPLSHLEELDLGQN 241
LP LF PL LE + L N
Sbjct: 293 SLPHDLFTPLHRLERVHLNHN 313
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 49/154 (31%), Positives = 72/154 (46%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N I+++ S A SL+ +DL +L I FE L L L L
Sbjct: 162 LRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL 221
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ N T L L+ L L GN L+ + F L+ L +L L +++ I++ F+ L
Sbjct: 222 KDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLK 279
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+L L L N L S+P F L L RV LN
Sbjct: 280 SLEELNLSHNNLMSLPHDLFTPLHRLE--RVHLN 311
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 225 (84.3 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 65/205 (31%), Positives = 102/205 (49%)
Query: 114 NDETLVVTCKEANLDVIP--ITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQ 170
+D LVV + +IP + P +Q L LK NRIK V+ Q SL+ + + N
Sbjct: 190 SDSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNG 249
Query: 171 LVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPL 230
+ + F + EL+L HN L+ VN GL+ L+ L + N +E + +
Sbjct: 250 ISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFC 309
Query: 231 SHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN- 289
L ELDL N+++R+D++ F GL+ L L L DN++ + F +L L L + N
Sbjct: 310 QRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNND 369
Query: 290 VFTTLADG--AFNGLGRLSALDLRG 312
+ + D AF+GL L+ L L+G
Sbjct: 370 ISWAIEDASEAFSGLKSLTKLILQG 394
Score = 210 (79.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 57/184 (30%), Positives = 97/184 (52%)
Query: 137 SIQRLVLKYNRIKTVDSAI--QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
S++ L L NRI T+++ SL V L+ N++ IP + F+ L L+L N+
Sbjct: 167 SLKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFKLPH-LQFLELKRNR 225
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ V TF GL SL+ L ++ N + L D F L+++EEL+L N ++ +++ GL
Sbjct: 226 IKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGL 285
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L+ LY+ N + + ++ + L+EL + N T L + AF GL L L+L
Sbjct: 286 RMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNR 345
Query: 315 LTNM 318
+T++
Sbjct: 346 VTHI 349
Score = 203 (76.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 60/221 (27%), Positives = 105/221 (47%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDV-----IPITLNPSIQRLVLKYNRIKTVDSAIQFY 158
+ CP C C L C L + L I L L +NR+ ++ ++
Sbjct: 39 AGLCPAPCACRLPLL--DCSRRKLPAPSWRALSGPLPSDISSLDLSHNRLSNWNNTLES- 95
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+LQ V +++N+L IP G EP + L L HN + +N + F +L+ L+L N
Sbjct: 96 QTLQEVKMNYNELTEIPYFG-EPTPNITLLSLVHNLIPEINAEAFELYSALESLDLSSNI 154
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT-ALRILYLDDNQLRSVPTPSFIY 277
+ ++ F +S L+ L+L NRIS ++ CF+ L+ +L ++ L+ N++ +P P
Sbjct: 155 ISEIKTSSFPRMS-LKYLNLSNNRISTLEAGCFDNLSDSLLVVKLNRNRISMIP-PKVFK 212
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L L + N + F GL L +L ++ G++ +
Sbjct: 213 LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKL 253
Score = 194 (73.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 56/171 (32%), Positives = 94/171 (54%)
Query: 134 LNPSIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
LN +++ L L++N + V+ + LQ + +S N + I +E ++L EL L++
Sbjct: 261 LN-NMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSY 319
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS-RIDQA-- 249
N+L+ ++ F+GL L+ LNL N + + D +F LS+L+ LDL N IS I+ A
Sbjct: 320 NQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISWAIEDASE 379
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
F GL +L L L N+++SV +FI L L L + N ++ + AF+
Sbjct: 380 AFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFS 430
Score = 188 (71.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 53/178 (29%), Positives = 85/178 (47%)
Query: 134 LNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
L+ S+ + L NRI + + LQ ++L N++ + F+ + L L++ N
Sbjct: 189 LSDSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRN 248
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+S + + F GL +++ L L N L + L L++L + QN I +I +E
Sbjct: 249 GISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEF 308
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L L L NQL + +F+ L +L L +G N T +ADG F L L LDLR
Sbjct: 309 CQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLR 366
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 50/192 (26%), Positives = 92/192 (47%)
Query: 137 SIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L ++ N I K D A ++++ ++L HN L + L +L ++ N +
Sbjct: 239 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAI 298
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + + L L+L N L L + F LS LE L+LG NR++ I F L+
Sbjct: 299 EKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 358
Query: 256 ALRILYLDDNQLR-SVPTPSFIYLGM--LAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+ L L +N + ++ S + G+ L +L + N ++ AF GL L LDL
Sbjct: 359 NLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNN 418
Query: 313 AGLTNMMGHSMA 324
+ ++ ++ +
Sbjct: 419 NAIMSIQENAFS 430
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 44/134 (32%), Positives = 69/134 (51%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ L L YN++ +D SA S L+ ++L N++ +I F L L L +N +S
Sbjct: 312 LSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDIS 371
Query: 197 -SVNN--KTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
++ + + F GLKSL L L+GN ++ + + F L LE LDL N I I + F
Sbjct: 372 WAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQ 431
Query: 254 LTALRILYLDDNQL 267
T L+ L L+ + L
Sbjct: 432 -THLKGLVLNTSSL 444
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 222 (83.2 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 66/211 (31%), Positives = 102/211 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C L +P ++ + + L L+ N I+ + + + L+H++
Sbjct: 57 CPAACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRT--DTFKHLRHLEI 114
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I + F L L+L N+L++V + F L L+ L LR N +E +P
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 174
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+ I +A FEGL LR L L L+ +P + L L
Sbjct: 175 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTALVRLE 232
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
EL + N + G+F GL L L L A
Sbjct: 233 ELELSGNRLDLIRPGSFQGLTSLRKLWLMHA 263
Score = 199 (75.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 61/177 (34%), Positives = 90/177 (50%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L NR+ TV + A ++ S L+ + L +N + +IP F L L L K
Sbjct: 134 PSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 193
Query: 195 -LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L ++ F GL +L+ LNL L+D+P+ L LEEL+L NR+ I F+G
Sbjct: 194 RLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQG 251
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LT+LR L+L Q+ ++ +F L L EL + N +L F L RL + L
Sbjct: 252 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 308
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + TF L+ L++L L N + + F L L L+L NR++ +
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 150
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L +++ AF GL L
Sbjct: 151 TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLR 210
Query: 307 ALDLRGAGLTNM 318
L+L G+ N+
Sbjct: 211 YLNL---GMCNL 219
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N ++ ++ A SL ++L N+L +P + FE KL EL L +N +
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL+ L+L G LE + + F L +L L+LG + I L
Sbjct: 172 SIPSYAFNRVPSLRRLDL-GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 228
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L N+L + SF L L +L + T+ AF+ L L L+L
Sbjct: 229 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 288
Query: 315 LTNM 318
L ++
Sbjct: 289 LMSL 292
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS N+L I F+ L +L L H +++++ F LKSL+ LNL N L
Sbjct: 231 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM 290
Query: 221 DLPDRLFAPLSHLEELDLGQN 241
LP LF PL LE + L N
Sbjct: 291 SLPHDLFTPLHRLERVHLNHN 311
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 49/154 (31%), Positives = 72/154 (46%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N I+++ S A SL+ +DL +L I FE L L L L
Sbjct: 160 LRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL 219
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ N T L L+ L L GN L+ + F L+ L +L L +++ I++ F+ L
Sbjct: 220 KDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLK 277
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+L L L N L S+P F L L RV LN
Sbjct: 278 SLEELNLSHNNLMSLPHDLFTPLHRLE--RVHLN 309
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 222 (83.2 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 66/211 (31%), Positives = 103/211 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C +L +P ++ + + L L+ N I+ + + + L+H++
Sbjct: 57 CPVACSCSNQASRVICTRRDLAEVPASIPVNTRYLNLQENGIQVIRT--DTFKHLRHLEI 114
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I + F L L+L N+L++V + F L L+ L LR N +E +P
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 174
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+ I +A FEGL LR L L L+ +P + L L
Sbjct: 175 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTALVRLE 232
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
EL + N + G+F GL L L L A
Sbjct: 233 ELELSGNRLDLIRPGSFQGLTSLRKLWLMHA 263
Score = 199 (75.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 61/177 (34%), Positives = 90/177 (50%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L NR+ TV + A ++ S L+ + L +N + +IP F L L L K
Sbjct: 134 PSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 193
Query: 195 -LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L ++ F GL +L+ LNL L+D+P+ L LEEL+L NR+ I F+G
Sbjct: 194 RLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQG 251
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LT+LR L+L Q+ ++ +F L L EL + N +L F L RL + L
Sbjct: 252 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 308
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + TF L+ L++L L N + + F L L L+L NR++ +
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 150
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L +++ AF GL L
Sbjct: 151 TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLR 210
Query: 307 ALDLRGAGLTNM 318
L+L G+ N+
Sbjct: 211 YLNL---GMCNL 219
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N ++ ++ A SL ++L N+L +P + FE KL EL L +N +
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL+ L+L G LE + + F L +L L+LG + I L
Sbjct: 172 SIPSYAFNRVPSLRRLDL-GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 228
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L N+L + SF L L +L + T+ AF+ L L L+L
Sbjct: 229 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 288
Query: 315 LTNM 318
L ++
Sbjct: 289 LMSL 292
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS N+L I F+ L +L L H +++++ F LKSL+ LNL N L
Sbjct: 231 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM 290
Query: 221 DLPDRLFAPLSHLEELDLGQN 241
LP LF PL LE + L N
Sbjct: 291 SLPHDLFTPLHRLERVHLNHN 311
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 49/154 (31%), Positives = 72/154 (46%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N I+++ S A SL+ +DL +L I FE L L L L
Sbjct: 160 LRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL 219
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ N T L L+ L L GN L+ + F L+ L +L L +++ I++ F+ L
Sbjct: 220 KDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLK 277
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+L L L N L S+P F L L RV LN
Sbjct: 278 SLEELNLSHNNLMSLPHDLFTPLHRLE--RVHLN 309
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 222 (83.2 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 66/211 (31%), Positives = 102/211 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C L +P ++ + + L L+ N I+ + + + L+H++
Sbjct: 57 CPAACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRT--DTFKHLRHLEI 114
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I + F L L+L N+L++V + F L L+ L LR N +E +P
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 174
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+ I +A FEGL LR L L L+ +P + L L
Sbjct: 175 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTALVRLE 232
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
EL + N + G+F GL L L L A
Sbjct: 233 ELELSGNRLDLIRPGSFQGLTSLRKLWLMHA 263
Score = 199 (75.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 61/177 (34%), Positives = 90/177 (50%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L NR+ TV + A ++ S L+ + L +N + +IP F L L L K
Sbjct: 134 PSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 193
Query: 195 -LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L ++ F GL +L+ LNL L+D+P+ L LEEL+L NR+ I F+G
Sbjct: 194 RLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQG 251
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LT+LR L+L Q+ ++ +F L L EL + N +L F L RL + L
Sbjct: 252 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 308
Score = 147 (56.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + TF L+ L++L L N + + F L L L+L NR++ +
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 150
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L +++ AF GL L
Sbjct: 151 TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLR 210
Query: 307 ALDLRGAGLTNM 318
L+L G+ N+
Sbjct: 211 YLNL---GMCNL 219
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N ++ ++ A SL ++L N+L +P + FE KL EL L +N +
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL+ L+L G LE + + F L +L L+LG + I L
Sbjct: 172 SIPSYAFNRVPSLRRLDL-GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 228
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L N+L + SF L L +L + T+ AF+ L L L+L
Sbjct: 229 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 288
Query: 315 LTNM 318
L ++
Sbjct: 289 LMSL 292
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS N+L I F+ L +L L H +++++ F LKSL+ LNL N L
Sbjct: 231 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM 290
Query: 221 DLPDRLFAPLSHLEELDLGQN 241
LP LF PL LE + L N
Sbjct: 291 SLPHDLFTPLHRLERVHLNHN 311
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 49/154 (31%), Positives = 72/154 (46%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N I+++ S A SL+ +DL +L I FE L L L L
Sbjct: 160 LRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL 219
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ N T L L+ L L GN L+ + F L+ L +L L +++ I++ F+ L
Sbjct: 220 KDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLK 277
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+L L L N L S+P F L L RV LN
Sbjct: 278 SLEELNLSHNNLMSLPHDLFTPLHRLE--RVHLN 309
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 222 (83.2 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 66/211 (31%), Positives = 102/211 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD- 165
CP C C+++ V C L +P ++ + + L L+ N I+ + + + L+H++
Sbjct: 57 CPAACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRT--DTFKHLRHLEI 114
Query: 166 --LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
LS N + I + F L L+L N+L++V + F L L+ L LR N +E +P
Sbjct: 115 LQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIP 174
Query: 224 DRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F + L LDLG+ R+ I +A FEGL LR L L L+ +P + L L
Sbjct: 175 SYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP--NLTALVRLE 232
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
EL + N + G+F GL L L L A
Sbjct: 233 ELELSGNRLDLIRPGSFQGLTSLRKLWLMHA 263
Score = 199 (75.1 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 61/177 (34%), Positives = 90/177 (50%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L NR+ TV + A ++ S L+ + L +N + +IP F L L L K
Sbjct: 134 PSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELK 193
Query: 195 -LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L ++ F GL +L+ LNL L+D+P+ L LEEL+L NR+ I F+G
Sbjct: 194 RLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQG 251
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LT+LR L+L Q+ ++ +F L L EL + N +L F L RL + L
Sbjct: 252 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 308
Score = 147 (56.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + TF L+ L++L L N + + F L L L+L NR++ +
Sbjct: 91 LNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 150
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L +++ AF GL L
Sbjct: 151 TQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLR 210
Query: 307 ALDLRGAGLTNM 318
L+L G+ N+
Sbjct: 211 YLNL---GMCNL 219
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N ++ ++ A SL ++L N+L +P + FE KL EL L +N +
Sbjct: 112 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE 171
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL+ L+L G LE + + F L +L L+LG + I L
Sbjct: 172 SIPSYAFNRVPSLRRLDL-GELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTAL 228
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L N+L + SF L L +L + T+ AF+ L L L+L
Sbjct: 229 VRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNN 288
Query: 315 LTNM 318
L ++
Sbjct: 289 LMSL 292
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS N+L I F+ L +L L H +++++ F LKSL+ LNL N L
Sbjct: 231 LEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM 290
Query: 221 DLPDRLFAPLSHLEELDLGQN 241
LP LF PL LE + L N
Sbjct: 291 SLPHDLFTPLHRLERVHLNHN 311
Score = 117 (46.2 bits), Expect = 0.00081, P = 0.00080
Identities = 49/154 (31%), Positives = 72/154 (46%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N I+++ S A SL+ +DL +L I FE L L L L
Sbjct: 160 LRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL 219
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ N T L L+ L L GN L+ + F L+ L +L L +++ I++ F+ L
Sbjct: 220 KDIPNLT--ALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLK 277
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+L L L N L S+P F L L RV LN
Sbjct: 278 SLEELNLSHNNLMSLPHDLFTPLHRLE--RVHLN 309
>UNIPROTKB|E1C0J7 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 EMBL:AADN02019209
IPI:IPI00576786 ProteinModelPortal:E1C0J7
Ensembl:ENSGALT00000009463 Uniprot:E1C0J7
Length = 1411
Score = 225 (84.3 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 62/166 (37%), Positives = 85/166 (51%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CPP C C T V C L+ IP + P L L++N I+ + A + +L
Sbjct: 20 SSRSCPPRCLCFRTT--VRCMHLMLETIP-DIPPQTSILDLRFNHIREIQPGAFRRLKNL 76
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ L++NQ+ +I R FE E L L L N++ S+ F GL+SL+ L L N LE
Sbjct: 77 NTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLET 136
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
L F+ L LE L L N+ISRI F L +L+ L LD N L
Sbjct: 137 LEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
Score = 150 (57.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 46/143 (32%), Positives = 67/143 (46%)
Query: 168 HNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLF 227
H L IP PQ +++L+ NH + + F LK+L L L N ++ + R F
Sbjct: 39 HLMLETIP--DIPPQTSILDLRFNH--IREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSF 94
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
L +L+ L L +N I I Q F GL +L LYL N L ++ +F L L L +
Sbjct: 95 EDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLETLEPETFSDLPKLERLFLH 154
Query: 288 LNVFTTLADGAFNGLGRLSALDL 310
N + + G F+ L L L L
Sbjct: 155 NNKISRIHPGTFSQLESLKRLRL 177
Score = 131 (51.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N + I F + L L LN+N++ + ++F L++LK L L N ++ +
Sbjct: 55 LDLRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQ 114
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L LE+L L N + ++ F L L L+L +N++ + +F L L
Sbjct: 115 QHAFHGLRSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKR 174
Query: 284 LRVGLN 289
LR+ N
Sbjct: 175 LRLDSN 180
>UNIPROTKB|E1C0J1 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 OMA:GGRYECQ
EMBL:AADN02019209 IPI:IPI00599639 ProteinModelPortal:E1C0J1
Ensembl:ENSGALT00000009466 Uniprot:E1C0J1
Length = 1424
Score = 225 (84.3 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 62/166 (37%), Positives = 85/166 (51%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CPP C C T V C L+ IP + P L L++N I+ + A + +L
Sbjct: 20 SSRSCPPRCLCFRTT--VRCMHLMLETIP-DIPPQTSILDLRFNHIREIQPGAFRRLKNL 76
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ L++NQ+ +I R FE E L L L N++ S+ F GL+SL+ L L N LE
Sbjct: 77 NTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLET 136
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
L F+ L LE L L N+ISRI F L +L+ L LD N L
Sbjct: 137 LEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
Score = 150 (57.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 46/143 (32%), Positives = 67/143 (46%)
Query: 168 HNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLF 227
H L IP PQ +++L+ NH + + F LK+L L L N ++ + R F
Sbjct: 39 HLMLETIP--DIPPQTSILDLRFNH--IREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSF 94
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
L +L+ L L +N I I Q F GL +L LYL N L ++ +F L L L +
Sbjct: 95 EDLENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFNSLETLEPETFSDLPKLERLFLH 154
Query: 288 LNVFTTLADGAFNGLGRLSALDL 310
N + + G F+ L L L L
Sbjct: 155 NNKISRIHPGTFSQLESLKRLRL 177
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N + I F + L L LN+N++ + ++F L++LK L L N ++ +
Sbjct: 55 LDLRFNHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQ 114
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L LE+L L N + ++ F L L L+L +N++ + +F L L
Sbjct: 115 QHAFHGLRSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKR 174
Query: 284 LRVGLN 289
LR+ N
Sbjct: 175 LRLDSN 180
>MGI|MGI:2141485 [details] [associations]
symbol:Lrtm2 "leucine-rich repeats and transmembrane domains
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2141485
GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 GeneTree:ENSGT00700000104083 HOGENOM:HOG000290674
CTD:654429 eggNOG:NOG248110 HOVERGEN:HBG081938 OMA:GEHEDQK
OrthoDB:EOG4C5CKK EMBL:AK039006 EMBL:AK045494 EMBL:BC058944
IPI:IPI00221765 RefSeq:NP_001165678.1 RefSeq:NP_766080.1
UniGene:Mm.121498 ProteinModelPortal:Q8BGX3 SMR:Q8BGX3
PhosphoSite:Q8BGX3 PaxDb:Q8BGX3 PRIDE:Q8BGX3
Ensembl:ENSMUST00000068351 Ensembl:ENSMUST00000112756
Ensembl:ENSMUST00000168793 GeneID:211187 KEGG:mmu:211187
UCSC:uc009dmb.2 InParanoid:Q8BGX3 NextBio:373160 Bgee:Q8BGX3
CleanEx:MM_LRTM2 Genevestigator:Q8BGX3
GermOnline:ENSMUSG00000055003 Uniprot:Q8BGX3
Length = 370
Score = 216 (81.1 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 55/160 (34%), Positives = 82/160 (51%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CP C C+ +L V C L +P + + Q L+L N++ + S A S+LQ +D
Sbjct: 39 CPFSCTCDSRSLEVDCSGLGLTTVPPDVPAATQSLLLLNNKLSALPSWAFANLSNLQRLD 98
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+N L +P FE L ELQL +N + +++ L+ L+L N L LP
Sbjct: 99 LSNNFLDQLPRSIFEDLVNLTELQLRNNSIRTLDRDLLQHSPLLRHLDLSINGLAQLPPG 158
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
LF L L L L NR+ +D+ FE L +L++L + DN
Sbjct: 159 LFDGLLALRSLSLRSNRLQSLDRLTFEPLASLQLLQVGDN 198
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/145 (32%), Positives = 67/145 (46%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L +NKLS++ + F L +L+ L+L NFL+ LP +F L +L EL L N I +D
Sbjct: 73 LLLLNNKLSALPSWAFANLSNLQRLDLSNNFLDQLPRSIFEDLVNLTELQLRNNSIRTLD 132
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ + LR L L N L +P F L L L + N +L F L L
Sbjct: 133 RDLLQHSPLLRHLDLSINGLAQLPPGLFDGLLALRSLSLRSNRLQSLDRLTFEPLASLQL 192
Query: 308 LDLRGAGLTNMMGHSMALGDYLHWI 332
L + G N L ++ HW+
Sbjct: 193 LQV-G---DNPWECDCNLREFKHWL 213
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
+SL +LN N L LP FA LS+L+ LDL N + ++ ++ FE L L L L +N
Sbjct: 71 QSLLLLN---NKLSALPSWAFANLSNLQRLDLSNNFLDQLPRSIFEDLVNLTELQLRNNS 127
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+R++ + +L L + +N L G F+GL L +L LR L ++
Sbjct: 128 IRTLDRDLLQHSPLLRHLDLSINGLAQLPPGLFDGLLALRSLSLRSNRLQSL 179
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 222 (83.2 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 62/207 (29%), Positives = 95/207 (45%)
Query: 107 CPPDCDCNDETLVVT--CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSS-LQH 163
CP C C ++ ++++ C E L V+P L+P L L N + + + + L+
Sbjct: 35 CPAPCHCQEDGIMLSADCSELGLSVVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ LS N L +IP + F L L L N+L + + L SL+ L L N + +P
Sbjct: 95 LRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVP 154
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+R F LS L L L N ++ I L AL+ + L N +R +P +F L L
Sbjct: 155 ERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVV 214
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + +F GL L LDL
Sbjct: 215 LHLHNNRIQHVGTHSFEGLHNLETLDL 241
Score = 215 (80.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 57/160 (35%), Positives = 81/160 (50%)
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
++DLS N L + F L EL+L+ N LS + + F GL SLK+L L+ N L +
Sbjct: 70 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGI 129
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
P L L+ L L N IS + + FEGL++LR L+LDDN L +P + L L
Sbjct: 130 PAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQ 189
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ + LN + D AF L L L L + ++ HS
Sbjct: 190 AMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHS 229
Score = 181 (68.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 56/181 (30%), Positives = 86/181 (47%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFE--PQEKLVELQLNH 192
PS+Q L L N I V + + + SSL+H+ L N L IP+R P + + L LNH
Sbjct: 138 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNH 197
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
+ + + F L SL VL+L N ++ + F L +LE LDL N + A
Sbjct: 198 --IRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPLA-IR 254
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L L+ L +N ++++P +F+ +L + N + AF L +L L L G
Sbjct: 255 TLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLNG 314
Query: 313 A 313
A
Sbjct: 315 A 315
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 56/172 (32%), Positives = 81/172 (47%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N + + A SL+ + L NQL IP L L+L+ N +S
Sbjct: 92 LEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS 151
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V ++F GL SL+ L L N L ++P R L L+ + L N I I F+ LT+
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTS 211
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L +L+L +N+++ V T SF L L L + N A LGRL L
Sbjct: 212 LVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPL-AIRTLGRLQEL 262
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 49/175 (28%), Positives = 75/175 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN ++ AI+ LQ + +N + IP + F L + N +
Sbjct: 235 NLETLDLNYNELQEFPLAIRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQ 294
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L L+L G +++ PD + LE L L + I + + L
Sbjct: 295 FVGRSAFQYLSKLHTLSLNGATDIQEFPD--LKGTTSLEILTLTRAGIRLLPPGVCQQLP 352
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LRIL L NQ+ +P S L E+ + N + F+ LG L ALDL
Sbjct: 353 RLRILELSHNQIEELP--SLHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDL 405
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/124 (29%), Positives = 64/124 (51%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L I+ + + Q L+ ++LSHNQ+ +P +KL E+ L HN++
Sbjct: 329 SLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQIEELP--SLHRCQKLEEIGLRHNRI 386
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ TF L SL+ L+L N + + F+ L L +LDL N+++ + A GL
Sbjct: 387 KEIGADTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLPLAGLGGLM 446
Query: 256 ALRI 259
L++
Sbjct: 447 HLKL 450
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 219 (82.2 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 57/173 (32%), Positives = 91/173 (52%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I +VD A Q L+ + LS N++ + + F P L L L++NKL ++
Sbjct: 90 LYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQ 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
++ F GL+ L +L+LR N L+ +P R+F +L+ LDLG NR+ + + F GL L+
Sbjct: 150 SEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ NQ + F L L + + N +++ G L LDL G
Sbjct: 210 LHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSG 262
Score = 194 (73.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 51/149 (34%), Positives = 77/149 (51%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q + L N + + F +L+ L L+HN +SSV+ F G++ LK L L N +
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L ++ F P+ +L LDL N++ + F+GL L IL+L N L++VP F L
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +G N +L+ AF GL +L L L
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHL 212
Score = 186 (70.5 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 58/182 (31%), Positives = 89/182 (48%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L+L N+I + + +L+++DLS+N+L + F+ KL+ L L N L
Sbjct: 111 LKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLK 170
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+V + F ++L L+L N L L FA L L+EL L N+ S+I+ A F L
Sbjct: 171 TVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFN 230
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
LR +YL N++RSV L L + N + G F L L L+L LT
Sbjct: 231 LRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLT 290
Query: 317 NM 318
N+
Sbjct: 291 NV 292
Score = 180 (68.4 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 57/200 (28%), Positives = 95/200 (47%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSH---NQLVNIPIRGFEPQEKLVELQLNH 192
P+++ L L YN+++T+ S QF L+ + + H N L +PIR F+ L L L +
Sbjct: 133 PNLRNLDLSYNKLQTLQSE-QF-KGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGY 190
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N+L S++ F GL LK L+L N + F L +L + L NRI + Q
Sbjct: 191 NRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTW 250
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
++L L L N ++++ +F L L +L + N T ++ N L ++ L G
Sbjct: 251 TWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISLISITLSG 310
Query: 313 AGLTNMMGHSMALGDYLHWI 332
NM S ++ +W+
Sbjct: 311 ----NMWECSRSICPLFYWL 326
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 35/104 (33%), Positives = 51/104 (49%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L+LR N ++ L FA L+ L L L N IS +D+ F+G+ L+ L L N++ +
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
+F + L L + N TL F GL +L L LR L
Sbjct: 126 NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSL 169
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 219 (82.2 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 57/173 (32%), Positives = 91/173 (52%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I +VD A Q L+ + LS N++ + + F P L L L++NKL ++
Sbjct: 90 LYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQ 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
++ F GL+ L +L+LR N L+ +P R+F +L+ LDLG NR+ + + F GL L+
Sbjct: 150 SEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ NQ + F L L + + N +++ G L LDL G
Sbjct: 210 LHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSG 262
Score = 194 (73.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 51/149 (34%), Positives = 77/149 (51%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q + L N + + F +L+ L L+HN +SSV+ F G++ LK L L N +
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L ++ F P+ +L LDL N++ + F+GL L IL+L N L++VP F L
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +G N +L+ AF GL +L L L
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHL 212
Score = 186 (70.5 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 58/182 (31%), Positives = 89/182 (48%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L+L N+I + + +L+++DLS+N+L + F+ KL+ L L N L
Sbjct: 111 LKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLK 170
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+V + F ++L L+L N L L FA L L+EL L N+ S+I+ A F L
Sbjct: 171 TVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFN 230
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
LR +YL N++RSV L L + N + G F L L L+L LT
Sbjct: 231 LRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLT 290
Query: 317 NM 318
N+
Sbjct: 291 NV 292
Score = 180 (68.4 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 57/200 (28%), Positives = 95/200 (47%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSH---NQLVNIPIRGFEPQEKLVELQLNH 192
P+++ L L YN+++T+ S QF L+ + + H N L +PIR F+ L L L +
Sbjct: 133 PNLRNLDLSYNKLQTLQSE-QF-KGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGY 190
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N+L S++ F GL LK L+L N + F L +L + L NRI + Q
Sbjct: 191 NRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTW 250
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
++L L L N ++++ +F L L +L + N T ++ N L ++ L G
Sbjct: 251 TWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISLISITLSG 310
Query: 313 AGLTNMMGHSMALGDYLHWI 332
NM S ++ +W+
Sbjct: 311 ----NMWECSRSICPLFYWL 326
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 35/104 (33%), Positives = 51/104 (49%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L+LR N ++ L FA L+ L L L N IS +D+ F+G+ L+ L L N++ +
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
+F + L L + N TL F GL +L L LR L
Sbjct: 126 NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSL 169
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 219 (82.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 61/206 (29%), Positives = 99/206 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CPP C+C+ + V C +P + + L L NRIKT++ + L+ ++
Sbjct: 42 CPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELE 101
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L+ N + + F L L L N+L + F GL +L L++ N + L D
Sbjct: 102 LNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY 161
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L +L+ L++G N + I F GL +L L L+ L S+PT + +L L LR
Sbjct: 162 MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLR 221
Query: 286 VG-LNVFTTLADGAFNGLGRLSALDL 310
+ LN+ + D +F L RL L++
Sbjct: 222 LRHLNI-NAIRDYSFKRLYRLKVLEI 246
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 49/159 (30%), Positives = 79/159 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ + F L EL+LN N +S+V F L SL+ L LR N L+ +P
Sbjct: 76 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIP 135
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+F LS+L +LD+ +N+I + F+ L L+ L + DN L + +F L L +
Sbjct: 136 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 195
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
L + T++ A + L L L LR + + +S
Sbjct: 196 LTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYS 234
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 39/142 (27%), Positives = 68/142 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L+ NR+K + + S+L +D+S N++V + F+ L L++ N L
Sbjct: 120 SLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 179
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++++ F GL SL+ L L L +P + L L L L I+ I F+ L
Sbjct: 180 VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLY 239
Query: 256 ALRILYLDDNQLRSVPTPSFIY 277
L++L + TP+ +Y
Sbjct: 240 RLKVLEISHWPYLDTMTPNCLY 261
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 223 (83.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 105 AFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQH 163
A CP C C L V C L +P ++ ++RL L+ N + + ++ Q + L+
Sbjct: 71 ARCPRVCSCTG--LNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRM 128
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L+ NQ+ I F+ L L+LN+N+L ++ SL L++ N + +
Sbjct: 129 LQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVG 188
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
R+F L L L N+I+ +D+ F+GL L IL L++N L S+P F LG L
Sbjct: 189 RRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRA 248
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG 326
LR+ N F D + L R R A T S G
Sbjct: 249 LRLSDNPFA--CDCHLSWLSRFLRSATRLAPYTRCQSPSQLKG 289
Score = 183 (69.5 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 46/137 (33%), Positives = 66/137 (48%)
Query: 106 FCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHV 164
+CPP C C VV C L IP + L L+ N I+ + I+ SL +
Sbjct: 738 YCPPSCTCTGT--VVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHYERIRHLRSLTRL 795
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS+NQ+ + F KL L +++NKL + GL +L+VL+L GN + LP+
Sbjct: 796 DLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPE 855
Query: 225 RLFAPLSHLEELDLGQN 241
F L L + LG N
Sbjct: 856 GSFEDLKSLTHIALGSN 872
Score = 169 (64.5 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 45/160 (28%), Positives = 75/160 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C D +V C+E +L +P+TL L L+ N I + + + L+ +D
Sbjct: 319 CPHPCRCADG--IVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRID 376
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+N + I ++L L L NK+ + + F GL SL++L L N + +
Sbjct: 377 LSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKD 436
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L L L L N I + F+ + +++ ++L N
Sbjct: 437 AFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKN 476
Score = 168 (64.2 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 46/138 (33%), Positives = 62/138 (44%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV-- 164
CP C C T V C L IP + L+L N + + S + L H+
Sbjct: 543 CPAMCHCEGTT--VDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSD-GLFGRLPHLVK 599
Query: 165 -DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+L NQL I FE + ELQL NK+ ++NK F+GL LK LNL N + +
Sbjct: 600 LELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVM 659
Query: 224 DRLFAPLSHLEELDLGQN 241
F L+ L L+L N
Sbjct: 660 PGSFEHLNSLTSLNLASN 677
Score = 157 (60.3 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 39/126 (30%), Positives = 64/126 (50%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N + +P + F +L + L++N +S + + GLK L L L GN ++DLP
Sbjct: 353 LEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSG 412
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L L+ L L N IS I + F L +L +L L DN ++S+ +F + + +
Sbjct: 413 VFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVH 472
Query: 286 VGLNVF 291
+ N F
Sbjct: 473 LAKNPF 478
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 40/106 (37%), Positives = 54/106 (50%)
Query: 187 ELQLNHNKLSSVNNKTFIG-LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISR 245
EL LN N+L +++ G L L L L+ N L + F SH++EL LG+N+I
Sbjct: 574 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 633
Query: 246 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
I F GL L+ L L DNQ+ V SF +L L L + N F
Sbjct: 634 ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 679
Score = 140 (54.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 42/126 (33%), Positives = 63/126 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S NQL IP RG P E EL L N++ ++ + L+SL L+L N + L
Sbjct: 750 VRCSRNQLKEIP-RGI-PAETS-ELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILS 806
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ FA L+ L L + N++ + + GL LR+L L N++ +P SF L L
Sbjct: 807 NYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTH 866
Query: 284 LRVGLN 289
+ +G N
Sbjct: 867 IALGSN 872
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 35/99 (35%), Positives = 48/99 (48%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L L NF+ +LP + F+ L +DL N ISRI GL L L L N+++ +P
Sbjct: 351 LRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLP 410
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+ F LG L L + N + + AF L LS L L
Sbjct: 411 SGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSL 449
Score = 116 (45.9 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 166 LSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L+ N+L I G F LV+L+L N+L+ + F G ++ L L N ++++ +
Sbjct: 577 LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISN 636
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
++F L L+ L+L N+IS + FE L +L L L N
Sbjct: 637 KMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 677
Score = 62 (26.9 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
LYL+ N++ + +L L L + N T L++ F L +LS L + L +
Sbjct: 771 LYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQ 830
Query: 320 GHSMA 324
H+++
Sbjct: 831 RHALS 835
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 220 (82.5 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 57/188 (30%), Positives = 97/188 (51%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQ 162
+A CPP C C+ T V C L +P ++ +RL L N I + + L+
Sbjct: 38 AAACPPLCACSGTT--VDCHGTALRAVPKSIPRGTERLELNGNNITRIHKNDFSGLKQLR 95
Query: 163 HVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ L NQ +++ RG F+ ++L L+LN N+L ++ F ++L L+L NF++
Sbjct: 96 VLQLMENQ-ISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFIQA 154
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P + F + L+ L L +N+IS I+ F L L +L L++N + S+P SF ++ L
Sbjct: 155 IPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKL 214
Query: 282 AELRVGLN 289
R+ N
Sbjct: 215 RTFRLHSN 222
Score = 173 (66.0 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 48/149 (32%), Positives = 72/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ ++L+ N + I F ++L LQL N++S V F +K L+ L L N L
Sbjct: 71 ERLELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHT 130
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N I I + F G T L+ L LD NQ+ + +F L L
Sbjct: 131 LPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGL 190
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N T++ +FN + +L L
Sbjct: 191 EVLTLNNNNITSIPVSSFNHMPKLRTFRL 219
Score = 169 (64.5 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 50/170 (29%), Positives = 81/170 (47%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C++ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 285 SSGSCPAMCTCSNG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYKKL 342
Query: 162 QHV------DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLR 215
+ + DLS+NQ+ I F+ L L L NK++ + F GL +L++L L
Sbjct: 343 RRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLLLLN 402
Query: 216 GNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
N + + F L +L L L N+I + + F L A++ L+L N
Sbjct: 403 ANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 452
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L+LN N ++ ++ F GLK L+VL L N + + F + LE L L +N++ +
Sbjct: 73 LELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLP 132
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ AL L L +N ++++P +F L L++ N + + DGAF L L
Sbjct: 133 ELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEV 192
Query: 308 LDLRGAGLTNM 318
L L +T++
Sbjct: 193 LTLNNNNITSI 203
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/138 (31%), Positives = 71/138 (51%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVEL------QLNHNKLSSVNNKTFIGLKSLKVLN 213
++ + L N + +IP F P +KL + L++N++S + F GL+SL L
Sbjct: 317 TMTEIRLELNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLV 376
Query: 214 LRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP 273
L GN + DLP +F L L+ L L N+I+ + F+ L L +L L DN+++S+
Sbjct: 377 LYGNKITDLPKGVFGGLFALQLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKG 436
Query: 274 SFIYLGMLAELRVGLNVF 291
+F L + L + N F
Sbjct: 437 TFTSLRAIQTLHLAQNPF 454
Score = 139 (54.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I V+ A L+ + L+ NQL +P F+ + L L L+ N + ++
Sbjct: 97 LQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFIQAIP 156
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G LK L L N + + D F L LE L L N I+ I + F + LR
Sbjct: 157 RKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRT 216
Query: 260 LYLDDNQL 267
L N L
Sbjct: 217 FRLHSNHL 224
Score = 57 (25.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFI-YLGMLAELRVGL-----NVFTTLADGAFNGLGRL 305
E +T +R L+ N ++S+P +F Y + L +G N + +A AF GL L
Sbjct: 316 ETMTEIR---LELNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQGLRSL 372
Query: 306 SALDLRGAGLTNM 318
++L L G +T++
Sbjct: 373 NSLVLYGNKITDL 385
Score = 44 (20.5 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 260 LYLDDNQLRSVP--TPSFIYLGML 281
LYLD NQ VP +F YL ++
Sbjct: 780 LYLDGNQFTQVPGQLSTFKYLQLV 803
>UNIPROTKB|Q86VH4 [details] [associations]
symbol:LRRTM4 "Leucine-rich repeat transmembrane neuronal
protein 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182030 EMBL:AY358324 EMBL:BC099738
EMBL:BC110058 IPI:IPI00465323 IPI:IPI00884323 RefSeq:NP_001128217.1
RefSeq:NP_079269.4 UniGene:Hs.285782 ProteinModelPortal:Q86VH4
SMR:Q86VH4 STRING:Q86VH4 PhosphoSite:Q86VH4 DMDM:166897996
PaxDb:Q86VH4 PRIDE:Q86VH4 Ensembl:ENST00000409088
Ensembl:ENST00000409093 Ensembl:ENST00000409884 GeneID:80059
KEGG:hsa:80059 UCSC:uc002snq.3 UCSC:uc002sns.2 CTD:80059
GeneCards:GC02M076974 HGNC:HGNC:19411 MIM:610870 neXtProt:NX_Q86VH4
PharmGKB:PA134972631 ChiTaRS:LRRTM4 GenomeRNAi:80059 NextBio:70258
ArrayExpress:Q86VH4 Bgee:Q86VH4 CleanEx:HS_LRRTM4
Genevestigator:Q86VH4 Uniprot:Q86VH4
Length = 590
Score = 218 (81.8 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 57/173 (32%), Positives = 91/173 (52%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I +VD A Q L+ + LS N++ + + F P L L L++NKL ++
Sbjct: 90 LYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQ 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
++ F GL+ L +L+LR N L+ +P R+F +L+ LDLG NR+ + + F GL L+
Sbjct: 150 SEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ NQ + F L L + + N +++ G L LDL G
Sbjct: 210 LHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSG 262
Score = 194 (73.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 51/149 (34%), Positives = 77/149 (51%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q + L N + + F +L+ L L+HN +SSV+ F G++ LK L L N +
Sbjct: 64 QGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITY 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L ++ F P+ +L LDL N++ + F+GL L IL+L N L++VP F L
Sbjct: 124 LHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +G N +L+ AF GL +L L L
Sbjct: 184 DFLDLGYNRLRSLSRNAFAGLLKLKELHL 212
Score = 184 (69.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 57/182 (31%), Positives = 89/182 (48%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L+L N+I + + +L+++DLS+N+L + F+ KL+ L L N L
Sbjct: 111 LKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLK 170
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+V + F ++L L+L N L L FA L L+EL L N+ S+I+ A F L
Sbjct: 171 TVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFN 230
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
LR +YL N++RS+ L L + N + G F L L L+L LT
Sbjct: 231 LRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLT 290
Query: 317 NM 318
N+
Sbjct: 291 NI 292
Score = 179 (68.1 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 58/200 (29%), Positives = 94/200 (47%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSH---NQLVNIPIRGFEPQEKLVELQLNH 192
P+++ L L YN+++T+ S QF L+ + + H N L +PIR F+ L L L +
Sbjct: 133 PNLRNLDLSYNKLQTLQSE-QF-KGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGY 190
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N+L S++ F GL LK L+L N + F L +L + L NRI I Q
Sbjct: 191 NRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTW 250
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
++L L L N ++ + +F L L +L + N T ++ N L ++ L G
Sbjct: 251 TWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISLISITLSG 310
Query: 313 AGLTNMMGHSMALGDYLHWI 332
NM S ++ +W+
Sbjct: 311 ----NMWECSRSICPLFYWL 326
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 35/104 (33%), Positives = 51/104 (49%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L+LR N ++ L FA L+ L L L N IS +D+ F+G+ L+ L L N++ +
Sbjct: 66 LSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLH 125
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
+F + L L + N TL F GL +L L LR L
Sbjct: 126 NKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSL 169
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 218 (81.8 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 66/216 (30%), Positives = 105/216 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C+C+ + V+C L IP + + L L NR+K+++ +F Y L+ +
Sbjct: 28 CPARCECSAQNKSVSCHRRRLLAIPEGIPIETKILDLSKNRLKSINPE-EFISYPLLEEI 86
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS N + N+ F L L+L N+L V F GL +L L++ N + L D
Sbjct: 87 DLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLD 146
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
+F L +L+ L++G N + I F GL +L L L+ L +VPT + +L L L
Sbjct: 147 YMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIAL 206
Query: 285 RVG-LNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
+ LN+ + AF L L L++ L ++M
Sbjct: 207 HLKHLNI-NNMPVYAFKRLFHLKNLEIDYWPLLDLM 241
Score = 152 (58.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 123 KEANLDVIPI---TLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRG 178
K L ++P+ T ++ +L + N+I + D Q +L+ +++ N LV I R
Sbjct: 113 KGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRA 172
Query: 179 FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDL 238
F L +L L L++V + L+SL L+L+ + ++P F L HL+ L++
Sbjct: 173 FSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEI 232
Query: 239 GQNRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 297
+ + A GL L L + + L +VP +F +L L L + N +T+ G
Sbjct: 233 DYWPLLDLMPANSLYGLN-LTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAG 291
Query: 298 AFNGLGRLSALDLRGAGLTNMMGHS 322
F+ L RL L + GA L + HS
Sbjct: 292 MFSDLIRLQELHIVGAQLRTIEPHS 316
Score = 146 (56.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 51/178 (28%), Positives = 81/178 (45%)
Query: 137 SIQRLVL-KYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+++L L K N A+ SL + L H + N+P+ F+ L L++++ L
Sbjct: 178 SLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPL 237
Query: 196 SSV---NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
+ N+ + L SL + N L +P F L +L L+L N IS I+ F
Sbjct: 238 LDLMPANSLYGLNLTSLSITNTN---LSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFS 294
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L+ L++ QLR++ SF L L L V N+ TL + F+ L L +
Sbjct: 295 DLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSI 352
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 48/175 (27%), Positives = 82/175 (46%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L LK NR+K V + S+L +D+S N++V + F+ L L++ N L
Sbjct: 106 NLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDL 165
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++++ F GL SL+ L L L +P + L L L L I+ + F+ L
Sbjct: 166 VYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLF 225
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L +D L + + +Y L L + +T+ AF L L+ L+L
Sbjct: 226 HLKNLEIDYWPLLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNL 280
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 216 (81.1 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 59/188 (31%), Positives = 90/188 (47%)
Query: 122 CKEANL-DVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFE 180
C N+ D I I L PS+Q L N + + AI+ +L HV L N++ + +
Sbjct: 138 CNLFNIPDRIFIEL-PSLQELFCFQNNFRRIPGAIRGMENLTHVYLERNRIEAVAYNSLQ 196
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
KL L L N+++ V+ + F G + ++ L L N + +LP+ F L L+ L+LG
Sbjct: 197 GLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNLGG 256
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
N + + F L L +LYLD N++ + +F L L L + N TTL F
Sbjct: 257 NFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLNSNNLTTLPFSVFQ 316
Query: 301 G---LGRL 305
LGRL
Sbjct: 317 PVYFLGRL 324
Score = 205 (77.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 64/207 (30%), Positives = 98/207 (47%)
Query: 107 CPPDCDCNDE-TLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHV 164
CP +C C E + V C A L IP + L N IK + + A SL+ +
Sbjct: 25 CPANCVCTQERSCSVLCDRAGLGQIPSEFPCEASSINLDKNSIKFLSERAFGTLPSLKSL 84
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L+HN + I F+ L EL++ HN+ + ++ +TF L+ L L+L L ++P
Sbjct: 85 SLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLHTRTFTALRRLVKLDLADCNLFNIP 144
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
DR+F L L+EL QN RI A G+ L +YL+ N++ +V S L L
Sbjct: 145 DRIFIELPSLQELFCFQNNFRRIPGA-IRGMENLTHVYLERNRIEAVAYNSLQGLTKLKY 203
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + + AF G ++ L L
Sbjct: 204 LNLQDNRINVVHERAFQGCRKMEYLYL 230
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 54/161 (33%), Positives = 76/161 (47%)
Query: 160 SLQHVDLSHNQLVNIP--IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGN 217
SLQ + N IP IRG E L + L N++ +V + GL LK LNL+ N
Sbjct: 153 SLQELFCFQNNFRRIPGAIRGME---NLTHVYLERNRIEAVAYNSLQGLTKLKYLNLQDN 209
Query: 218 FLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 277
+ + +R F +E L L N IS + + F+GL L++L L N LR+V F
Sbjct: 210 RINVVHERAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRD 269
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L L + N + +GAF L L +L L LT +
Sbjct: 270 LVELEVLYLDRNRINYIEEGAFENLTSLVSLHLNSNNLTTL 310
Score = 115 (45.5 bits), Expect = 0.00074, P = 0.00074
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L+ NRI V + A Q ++++ L+ N + +P F+ L L L N L
Sbjct: 201 LKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNLGGNFLR 260
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+V+N F L L+VL L N + + + F L+ L L L N ++ + + F+ +
Sbjct: 261 NVSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLNSNNLTTLPFSVFQPVYF 320
Query: 257 LRILYLDDN 265
L LYL N
Sbjct: 321 LGRLYLFRN 329
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 217 (81.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 58/207 (28%), Positives = 100/207 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C + + C+ ++ IP+ + P+I LV+ I+++ S Q ++ +
Sbjct: 21 CPESCQC--QVTKIVCQGFSVKEIPLPMPPTINALVISNTSIQSLKPSDFQTFAETLTLF 78
Query: 166 LSHNQ-LVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
++ N + + F+ L L + L+S+ + F L +L L L GN LE LP
Sbjct: 79 VAKNSNITEVEPHTFDQAFNLNVLGFSGTMLTSLPDNLFQNLTALTTLTLSGNKLEVLPS 138
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
L PL ++ +LDL +N +S + + F GL L +L L N ++ + + +F L L L
Sbjct: 139 SLLTPLVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSL 198
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLR 311
+ N T + G F+ L L L L+
Sbjct: 199 FLQQNELTDIPAGLFDDLVNLEVLHLQ 225
Score = 213 (80.0 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 65/217 (29%), Positives = 104/217 (47%)
Query: 108 PPDCDCNDETLVV-TCKEANL-DVIPITLNPSIQRLVLKYNRIKTV---DSAIQFYSSLQ 162
P D ETL + K +N+ +V P T + + VL ++ D+ Q ++L
Sbjct: 65 PSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTMLTSLPDNLFQNLTALT 124
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+ LS N+L +P P + +L L+ N LSS++ F GL L++L L+ N ++ L
Sbjct: 125 TLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQL 184
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
F LSHL L L QN ++ I F+ L L +L+L DN++ +P F + L
Sbjct: 185 HSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQKLK 244
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
+L + N + L G F L L+ L L+ +M
Sbjct: 245 KLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLM 281
Score = 170 (64.9 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 53/183 (28%), Positives = 90/183 (49%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L N+++ + S++ ++ +DLS N L ++ F ++L L L N +
Sbjct: 122 ALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSI 181
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+++ TF GL L+ L L+ N L D+P LF L +LE L L N+I ++ F +
Sbjct: 182 KQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQ 241
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L+ LYL N+L +P+ F+ L L + N + L F + L L L L
Sbjct: 242 KLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPETFGPMA-LQELWLYDNLL 300
Query: 316 TNM 318
T++
Sbjct: 301 THL 303
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 51/183 (27%), Positives = 91/183 (49%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ N+I+ + + + L+ + LS N+L +P F L L N+L
Sbjct: 218 NLEVLHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRL 277
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S + +TF G +L+ L L N L L + +F+ L+++ L + +NRI I F GL
Sbjct: 278 SRLMPETF-GPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGLI 336
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L+ + L N+L ++ F L LA + + N + +G+ RLS L+++ L
Sbjct: 337 ELKEVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNSL 396
Query: 316 TNM 318
N+
Sbjct: 397 QNL 399
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 119 VVTCKEANLDVIPITLNPSIQRLVLKY---NRIKTVDSAIQF-YSSLQHVDLSHNQLVNI 174
V+ ++ ++ +P L +Q+L Y NR+ + S I +L H L N+L +
Sbjct: 221 VLHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRL 280
Query: 175 PIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLE 234
F P L EL L N L+ + F L ++++L + N ++ + F L L+
Sbjct: 281 MPETFGPMA-LQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELK 339
Query: 235 ELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 294
E+ L NR++ I+ F GL L + +++NQ++ +P + L+ L + N L
Sbjct: 340 EVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNSLQNL 399
Query: 295 ADGAFNGL 302
N L
Sbjct: 400 PKDFLNTL 407
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 220 (82.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 59/160 (36%), Positives = 80/160 (50%)
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
++DLS N L + F L EL+L+ N LS + + F GL SLK+L L+ N L +
Sbjct: 69 YLDLSMNNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGI 128
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
P L L+ L L N IS + FEGL ALR L+LDDN L VP + L L
Sbjct: 129 PAEALWELPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQ 188
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ + LN + + D AF L L L L + ++ HS
Sbjct: 189 AMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHS 228
Score = 209 (78.6 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 61/207 (29%), Positives = 93/207 (44%)
Query: 107 CPPDCDCNDETLVVT--CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQH 163
CP C C ++ +++ C E L +P L+P L L N + + + + S L+
Sbjct: 34 CPAPCRCQEDGFMLSADCSERGLSAVPGDLHPLTAYLDLSMNNLTELQPGLFRHLSFLEE 93
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ LS N L +IP + F L L L +N+L + + L SL+ L L N + +P
Sbjct: 94 LRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVP 153
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
D F L L L L N ++ + L AL+ + L N++ VP +F L L
Sbjct: 154 DGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVV 213
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N L +F GL L LDL
Sbjct: 214 LHLHNNRIQHLGAHSFEGLHSLETLDL 240
Score = 181 (68.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 55/179 (30%), Positives = 82/179 (45%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+Q L L N I V D + + +L+H+ L N L +P+ L + L N+
Sbjct: 137 PSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNR 196
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+S V + F L SL VL+L N ++ L F L LE LDL N + A L
Sbjct: 197 ISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQEFPVA-IRTL 255
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L +N ++++P +F+ +L + N + AF L RL L L GA
Sbjct: 256 GRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFRHLPRLHTLSLNGA 314
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 52/172 (30%), Positives = 83/172 (48%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N + + A SL+ + L +NQL IP L L+L+ N +S
Sbjct: 91 LEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLIS 150
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V + +F GL +L+ L L N L ++P + L L+ + L NRIS + F+ L++
Sbjct: 151 LVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSS 210
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L +L+L +N+++ + SF L L L + N A LGRL L
Sbjct: 211 LVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQEFPV-AIRTLGRLQEL 261
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
LQ ++LSHNQ+ +P +KL ++ L HN++ + TF L SL+ L+L N +
Sbjct: 353 LQVLELSHNQIQGLP--SLHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNAIR 410
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ FA L L +LDL N+++ + A GL L++
Sbjct: 411 SIHPEAFATLRALVKLDLTHNQLTMLPLAGLGGLVHLKL 449
Score = 129 (50.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S++ L L +N ++ AI+ LQ + +N + IP + F L + N +
Sbjct: 234 SLETLDLNHNELQEFPVAIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQ 293
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L L+L G + +++ PD + LE L L + + R+ + L
Sbjct: 294 FVGRSAFRHLPRLHTLSLNGASDIQEFPD--LKGTTSLEILTLTRAGLQRLPPGMCQQLP 351
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL--NVFTTLADGAFNGLGRLSALDL 310
L++L L NQ++ +P+ ++ E ++GL N + F+ L L ALDL
Sbjct: 352 RLQVLELSHNQIQGLPS---LHRCQKLE-KIGLQHNRIWEIGADTFSQLTSLQALDL 404
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 218 (81.8 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 68/215 (31%), Positives = 102/215 (47%)
Query: 107 CPPDCDCN-----------DETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SA 154
CPP C C E V C + L +P L Q L+L+ N I VD S
Sbjct: 29 CPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALPAGTQTLLLQSNSIVRVDQSE 88
Query: 155 IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNL 214
+ + ++L +DLS N + F +L+ L L N+L+ + + +F GL SL+ L L
Sbjct: 89 LGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLASLQELYL 148
Query: 215 RGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 274
N L + R F+ LS+L L L N + ID FE L L IL + N++ ++ +
Sbjct: 149 NHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMN 208
Query: 275 FIYLGMLAELRV-GLNVFTTLADGAFNGLGRLSAL 308
F L L L + G+N+ ++D A GL L +L
Sbjct: 209 FRPLANLRSLVLAGMNL-REISDYALEGLQSLESL 242
Score = 197 (74.4 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 58/184 (31%), Positives = 90/184 (48%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + L L+ N++ + D + +SLQ + L+HNQL I R F L+ L LN N
Sbjct: 117 PQLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNL 176
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L +++++ F L +L++L + GN ++ + D F PL++L L L + I EGL
Sbjct: 177 LRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGL 236
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
+L L DNQL VP + + L L + N + G F + L L+ G
Sbjct: 237 QSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANM-----LHLKELG 291
Query: 315 LTNM 318
L NM
Sbjct: 292 LNNM 295
Score = 171 (65.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 51/158 (32%), Positives = 73/158 (46%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N +V + L EL L+ N S + F L L L+L N L L D
Sbjct: 76 LQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDH 135
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
FA L+ L+EL L N++ RI F GL+ L L+L+ N LR++ + F L L L
Sbjct: 136 SFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILM 195
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
+G N + D F L L +L L G L + +++
Sbjct: 196 IGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYAL 233
Score = 128 (50.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 114 NDETLVVTCKEANLDVIPITLNP--SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQ 170
N E L++ + + ++ + P +++ LVL ++ + D A++ SL+ + NQ
Sbjct: 190 NLEILMIGGNKVDA-ILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQ 248
Query: 171 LVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP--DRL-F 227
L +P R E L L LN N L V F + LK L L N +E+L D+
Sbjct: 249 LARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGL--NNMEELVSIDKFAL 306
Query: 228 APLSHLEELDLGQN-RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
L L +LD+ N R+S I F L + L L++N L ++ + L L E V
Sbjct: 307 VNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQE--V 364
Query: 287 GLN 289
GL+
Sbjct: 365 GLH 367
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 38/125 (30%), Positives = 57/125 (45%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + V+ L +L L+L N D D F L L L L +N+++R++
Sbjct: 74 LLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLE 133
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
F GL +L+ LYL+ NQL + +F L L L + N+ + F L L
Sbjct: 134 DHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEI 193
Query: 308 LDLRG 312
L + G
Sbjct: 194 LMIGG 198
Score = 118 (46.6 bits), Expect = 0.00062, P = 0.00062
Identities = 35/101 (34%), Positives = 48/101 (47%)
Query: 210 KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS 269
+ L L+ N + + L++L ELDL QN S F L L L+L++NQL
Sbjct: 72 QTLLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTR 131
Query: 270 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+ SF L L EL + N +A AF+GL L L L
Sbjct: 132 LEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHL 172
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 217 (81.4 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 61/206 (29%), Positives = 99/206 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CPP C+C+ + V C +P + + L L NRIKT++ + L+ ++
Sbjct: 36 CPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELE 95
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L+ N + + F L L L N+L + F GL +L L++ N + L D
Sbjct: 96 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY 155
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L +L+ L++G N + I F GL +L L L+ L S+PT + +L L LR
Sbjct: 156 MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 286 VG-LNVFTTLADGAFNGLGRLSALDL 310
+ LN+ + D +F L RL L++
Sbjct: 216 LRHLNI-NAIRDYSFKRLYRLKVLEI 240
Score = 154 (59.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ + F L EL+LN N +S+V F L +L+ L LR N L+ +P
Sbjct: 70 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 129
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+F LS+L +LD+ +N+I + F+ L L+ L + DN L + +F L L +
Sbjct: 130 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 189
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
L + T++ A + L L L LR + + +S
Sbjct: 190 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 228
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ NR+K + + S+L +D+S N++V + F+ L L++ N L
Sbjct: 114 NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 173
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++++ F GL SL+ L L L +P + L L L L I+ I F+ L
Sbjct: 174 VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 233
Query: 256 ALRILYLDDNQLRSVPTPSFIY 277
L++L + TP+ +Y
Sbjct: 234 RLKVLEISHWPYLDTMTPNCLY 255
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 217 (81.4 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 61/206 (29%), Positives = 99/206 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CPP C+C+ + V C +P + + L L NRIKT++ + L+ ++
Sbjct: 36 CPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELE 95
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L+ N + + F L L L N+L + F GL +L L++ N + L D
Sbjct: 96 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY 155
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L +L+ L++G N + I F GL +L L L+ L S+PT + +L L LR
Sbjct: 156 MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 215
Query: 286 VG-LNVFTTLADGAFNGLGRLSALDL 310
+ LN+ + D +F L RL L++
Sbjct: 216 LRHLNI-NAIRDYSFKRLYRLKVLEI 240
Score = 154 (59.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ + F L EL+LN N +S+V F L +L+ L LR N L+ +P
Sbjct: 70 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 129
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+F LS+L +LD+ +N+I + F+ L L+ L + DN L + +F L L +
Sbjct: 130 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 189
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
L + T++ A + L L L LR + + +S
Sbjct: 190 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 228
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ NR+K + + S+L +D+S N++V + F+ L L++ N L
Sbjct: 114 NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 173
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++++ F GL SL+ L L L +P + L L L L I+ I F+ L
Sbjct: 174 VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 233
Query: 256 ALRILYLDDNQLRSVPTPSFIY 277
L++L + TP+ +Y
Sbjct: 234 RLKVLEISHWPYLDTMTPNCLY 255
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 217 (81.4 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 61/206 (29%), Positives = 99/206 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CPP C+C+ + V C +P + + L L NRIKT++ + L+ ++
Sbjct: 42 CPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELE 101
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L+ N + + F L L L N+L + F GL +L L++ N + L D
Sbjct: 102 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY 161
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L +L+ L++G N + I F GL +L L L+ L S+PT + +L L LR
Sbjct: 162 MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 221
Query: 286 VG-LNVFTTLADGAFNGLGRLSALDL 310
+ LN+ + D +F L RL L++
Sbjct: 222 LRHLNI-NAIRDYSFKRLYRLKVLEI 246
Score = 154 (59.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ + F L EL+LN N +S+V F L +L+ L LR N L+ +P
Sbjct: 76 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 135
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+F LS+L +LD+ +N+I + F+ L L+ L + DN L + +F L L +
Sbjct: 136 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 195
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
L + T++ A + L L L LR + + +S
Sbjct: 196 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 234
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ NR+K + + S+L +D+S N++V + F+ L L++ N L
Sbjct: 120 NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 179
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++++ F GL SL+ L L L +P + L L L L I+ I F+ L
Sbjct: 180 VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 239
Query: 256 ALRILYLDDNQLRSVPTPSFIY 277
L++L + TP+ +Y
Sbjct: 240 RLKVLEISHWPYLDTMTPNCLY 261
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 217 (81.4 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 61/206 (29%), Positives = 99/206 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CPP C+C+ + V C +P + + L L NRIKT++ + L+ ++
Sbjct: 42 CPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELE 101
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L+ N + + F L L L N+L + F GL +L L++ N + L D
Sbjct: 102 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY 161
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L +L+ L++G N + I F GL +L L L+ L S+PT + +L L LR
Sbjct: 162 MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 221
Query: 286 VG-LNVFTTLADGAFNGLGRLSALDL 310
+ LN+ + D +F L RL L++
Sbjct: 222 LRHLNI-NAIRDYSFKRLYRLKVLEI 246
Score = 154 (59.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ + F L EL+LN N +S+V F L +L+ L LR N L+ +P
Sbjct: 76 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 135
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+F LS+L +LD+ +N+I + F+ L L+ L + DN L + +F L L +
Sbjct: 136 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 195
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
L + T++ A + L L L LR + + +S
Sbjct: 196 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 234
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ NR+K + + S+L +D+S N++V + F+ L L++ N L
Sbjct: 120 NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 179
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++++ F GL SL+ L L L +P + L L L L I+ I F+ L
Sbjct: 180 VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 239
Query: 256 ALRILYLDDNQLRSVPTPSFIY 277
L++L + TP+ +Y
Sbjct: 240 RLKVLEISHWPYLDTMTPNCLY 261
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 217 (81.4 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 61/206 (29%), Positives = 99/206 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CPP C+C+ + V C +P + + L L NRIKT++ + L+ ++
Sbjct: 42 CPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELE 101
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L+ N + + F L L L N+L + F GL +L L++ N + L D
Sbjct: 102 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY 161
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L +L+ L++G N + I F GL +L L L+ L S+PT + +L L LR
Sbjct: 162 MFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 221
Query: 286 VG-LNVFTTLADGAFNGLGRLSALDL 310
+ LN+ + D +F L RL L++
Sbjct: 222 LRHLNI-NAIRDYSFKRLYRLKVLEI 246
Score = 154 (59.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ + F L EL+LN N +S+V F L +L+ L LR N L+ +P
Sbjct: 76 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 135
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+F LS+L +LD+ +N+I + F+ L L+ L + DN L + +F L L +
Sbjct: 136 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQ 195
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
L + T++ A + L L L LR + + +S
Sbjct: 196 LTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 234
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ NR+K + + S+L +D+S N++V + F+ L L++ N L
Sbjct: 120 NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 179
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++++ F GL SL+ L L L +P + L L L L I+ I F+ L
Sbjct: 180 VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 239
Query: 256 ALRILYLDDNQLRSVPTPSFIY 277
L++L + TP+ +Y
Sbjct: 240 RLKVLEISHWPYLDTMTPNCLY 261
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 214 (80.4 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 73/226 (32%), Positives = 106/226 (46%)
Query: 102 QASAFCPPDCDCNDETLVVT-CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYS 159
Q +A CP C C +E V T C + L +P+ + + QR+ L NRI V +A +
Sbjct: 22 QVAAPCPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACR 81
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN-KLSSVNNKTFIGLKSLKVLNLRGNF 218
+L + L N L I F L +L L+ N +L SV+ TF GL L L+L
Sbjct: 82 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 141
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L++L LF L+ L+ L L N + + F L L L+L N++ SVP +F L
Sbjct: 142 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 201
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L L + N + AF LGRL L L L+ + ++A
Sbjct: 202 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALA 247
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 57/172 (33%), Positives = 81/172 (47%)
Query: 141 LVLKYNRIKTVDSA-IQFYSSLQHVDLSHN-QLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
L L N + +D+A + L+ +DLS N QL ++ F +L L L+ L +
Sbjct: 86 LWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQEL 145
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
F GL +L+ L L+ N L+ LPD F L +L L L NRIS + + F GL +L
Sbjct: 146 GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD 205
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L N++ V +F LG L L + N + L A L L L L
Sbjct: 206 RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRL 257
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 51/169 (30%), Positives = 77/169 (45%)
Query: 125 ANLDVIPITLNPSIQRLVLKYN-RIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG---FE 180
A +D T +++L L N ++++VD A + L + H + G F
Sbjct: 94 ARIDAAAFTGLALLEQLDLSDNAQLRSVDPAT--FHGLGRLHTLHLDRCGLQELGPGLFR 151
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
L L L N L ++ + TF L +L L L GN + +P+R F L L+ L L Q
Sbjct: 152 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 211
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
NR++ + F L L LYL N L ++PT + L L LR+ N
Sbjct: 212 NRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 260
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 52/174 (29%), Positives = 78/174 (44%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
++LQ++ L N L +P F L L L+ N++SSV + F GL SL L L N
Sbjct: 154 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 213
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN----QLRSVPTPS 274
+ + F L L L L N +S + L AL+ L L+DN R+ P +
Sbjct: 214 VAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWA 273
Query: 275 FI--YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG 326
++ + G +E+ L LA L RL+A DL+G + H + G
Sbjct: 274 WLQKFRGSSSEVPCSLP--QRLAG---RDLKRLAANDLQGCAVATGPYHPIWTG 322
>UNIPROTKB|F1S7K2 [details] [associations]
symbol:LRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615 OMA:RCAGPEA
GO:GO:0050873 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00690000102197 EMBL:CU972396
ProteinModelPortal:F1S7K2 Ensembl:ENSSSCT00000014761 Uniprot:F1S7K2
Length = 347
Score = 210 (79.0 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 64/207 (30%), Positives = 101/207 (48%)
Query: 116 ETLVVTCKEANLDVIPITLN---PSIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQL 171
+T+ + + NL +P + P++Q L L N+++ + + L+ +DL+ N L
Sbjct: 69 DTIYLATEFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNAL 128
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+P F+ L L L N+L ++ GLK+L+ L+L GN L LP +L A +
Sbjct: 129 KRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFT 188
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
L LDLG N++ + G L L+L+ N+L+ + L L + N
Sbjct: 189 DLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKL 248
Query: 292 TTLADGAFNGLGRLSALDLRGAGLTNM 318
TTLA GAF GL L LDL LT++
Sbjct: 249 TTLAAGAFRGLQVLDMLDLSNNSLTSV 275
Score = 186 (70.5 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 51/159 (32%), Positives = 85/159 (53%)
Query: 134 LNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
++ ++ LVLK NR+ +D++ ++ +L+H+DLS NQL +P + L L L +
Sbjct: 138 VSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGN 197
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N+L ++ G L+ L+L GN L+ L + AP L L L N+++ + F
Sbjct: 198 NQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFR 257
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLA-ELRVGLNV 290
GL L +L L +N L SVP + LG A ++VG ++
Sbjct: 258 GLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDI 296
Score = 144 (55.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 53/200 (26%), Positives = 92/200 (46%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQH-VDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L N +K + + S+ H + L N+L + + L L L+ N+
Sbjct: 116 PQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQ 175
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLP-DRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L ++ K L +L+L N L+ LP D L PL LE L L NR+ +++
Sbjct: 176 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK-LEWLHLEGNRLQVLEEGFLAP 234
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
LR L+L++N+L ++ +F L +L L + N T++ +G + LG+ + G
Sbjct: 235 QPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGF 294
Query: 314 GLT-NMMGHSMALGDYLHWI 332
++ N L D W+
Sbjct: 295 DISGNPWICDQKLDDLYRWL 314
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 218 (81.8 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 61/207 (29%), Positives = 95/207 (45%)
Query: 107 CPPDCDCNDETLVVT--CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSS-LQH 163
CP C C ++ ++++ C E L +P L+P L L N + + + + L+
Sbjct: 35 CPAPCHCQEDGIMLSADCSELGLSEVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ LS N L +IP + F L L L N+L + + L SL+ L L N + +P
Sbjct: 95 LRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVP 154
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+R F LS L L L N ++ I L AL+ + L N++R +P +F L L
Sbjct: 155 ERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTSLVV 214
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + +F GL L LDL
Sbjct: 215 LHLHNNRIQHVGTHSFEGLHNLETLDL 241
Score = 215 (80.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 57/160 (35%), Positives = 81/160 (50%)
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
++DLS N L + F L EL+L+ N LS + + F GL SLK+L L+ N L +
Sbjct: 70 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGI 129
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
P L L+ L L N IS + + FEGL++LR L+LDDN L +P + L L
Sbjct: 130 PAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQ 189
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ + LN + D AF L L L L + ++ HS
Sbjct: 190 AMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHS 229
Score = 181 (68.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 54/179 (30%), Positives = 84/179 (46%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+Q L L N I V + + + SSL+H+ L N L IP+R L + L N+
Sbjct: 138 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 197
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ + + F L SL VL+L N ++ + F L +LE LDL N + A L
Sbjct: 198 IRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPVA-IRTL 256
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L +N ++++P +F+ +L + N + AF L +L L L GA
Sbjct: 257 GRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLSKLHTLSLNGA 315
Score = 176 (67.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 57/172 (33%), Positives = 82/172 (47%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N + + A SL+ + L NQL IP L L+L+ N +S
Sbjct: 92 LEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLIS 151
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V ++F GL SL+ L L N L ++P R L L+ + L NRI I F+ LT+
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTS 211
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L +L+L +N+++ V T SF L L L + N A LGRL L
Sbjct: 212 LVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPV-AIRTLGRLQEL 262
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/124 (29%), Positives = 65/124 (52%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L I+ + + + Q L+ ++LSHNQ+ +P +KL E+ L HN++
Sbjct: 329 SLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQIEELP--SLHRCQKLEEIGLQHNRI 386
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ TF L SL+ L+L N + + F+ L L +LDL N+++ + A GL
Sbjct: 387 WEIGADTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLPLAGLGGLM 446
Query: 256 ALRI 259
L++
Sbjct: 447 HLKL 450
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/175 (27%), Positives = 74/175 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN ++ AI+ LQ + +N + IP + F L + N +
Sbjct: 235 NLETLDLNYNELQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQ 294
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L L+L G +++ PD + LE L L + I + + L
Sbjct: 295 FVGRSAFQYLSKLHTLSLNGATDIQEFPD--LKGTTSLEILTLTRAGIRLLPAGMCQQLP 352
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LRIL L NQ+ +P S L E+ + N + F+ L L ALDL
Sbjct: 353 RLRILELSHNQIEELP--SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDL 405
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 215 (80.7 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 64/207 (30%), Positives = 102/207 (49%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C+C+ + V C L +P + + L L NR+K ++ +F Y L+ +
Sbjct: 44 CPSRCECSAQERSVVCHRRKLITLPEGIPIDTRLLDLSKNRLKAINPE-EFLNYPQLEDL 102
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L+ N + I F L L L +N L + F GL +L L++ N + L D
Sbjct: 103 QLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVILLD 162
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
+F L +L+EL++G N + I F GL++L L ++ L SVPT +F +L L L
Sbjct: 163 YMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTL 222
Query: 285 RVG-LNVFTTLADGAFNGLGRLSALDL 310
++ LNV + D +F L RL L++
Sbjct: 223 KLRHLNV-NVIRDFSFRRLYRLKILEI 248
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 55/174 (31%), Positives = 86/174 (49%)
Query: 139 QRLVLKYNR-IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSS 197
+R V+ + R + T+ I + L +DLS N+L I F +L +LQLN N +S
Sbjct: 54 ERSVVCHRRKLITLPEGIPIDTRL--LDLSKNRLKAINPEEFLNYPQLEDLQLNENIISV 111
Query: 198 VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL 257
+ F L L+ L LR N L+ + +F LS+L LD+ +N+I + F+ L L
Sbjct: 112 IEPGAFSNLLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQELYNL 171
Query: 258 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
+ L + DN L + +F L L +L + T++ AF+ L L L LR
Sbjct: 172 KELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLKLR 225
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/149 (28%), Positives = 70/149 (46%)
Query: 170 QLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAP 229
+L+ +P G +L L L+ N+L ++N + F+ L+ L L N + + F+
Sbjct: 63 KLITLP-EGIPIDTRL--LDLSKNRLKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSN 119
Query: 230 LSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
L L L L N + I F GL+ L L + +N++ + F L L EL VG N
Sbjct: 120 LLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQELYNLKELEVGDN 179
Query: 290 VFTTLADGAFNGLGRLSALDLRGAGLTNM 318
++ AF+GL L L + LT++
Sbjct: 180 DLVFISHRAFHGLSSLEQLTMERCNLTSV 208
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 218 (81.8 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 65/216 (30%), Positives = 106/216 (49%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C + L C L +P L + RL L +NR+ + S++ SLQ V
Sbjct: 47 CPAACHCLGDLL--DCSRRRLVRLPDPLPAWVTRLDLSHNRLSFIQTSSLSHLQSLQEVK 104
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L++N+L IP G + +L L N + + + +SL+ L+L N + +L
Sbjct: 105 LNNNELETIPNLG-SISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNISELRTA 163
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTA-LRILYLDDNQLRSVPTPSFIYLGMLAEL 284
F PL L+ L + NR+S ++ F+ L + L +L L+ N++ ++P P L L L
Sbjct: 164 -FPPLQ-LKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIP-PKMFKLPQLQHL 220
Query: 285 RVGLNVFTTLADG-AFNGLGRLSALDLRGAGLTNMM 319
+ N + DG F GLG L +L ++ G+T +M
Sbjct: 221 ELNRNKIKNV-DGLTFQGLGALKSLKMQRNGVTKLM 255
Score = 205 (77.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 59/173 (34%), Positives = 87/173 (50%)
Query: 141 LVLKYNR--IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
LVLK NR I + + LQH++L+ N++ N+ F+ L L++ N ++ +
Sbjct: 195 LVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKL 254
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
+ F GL +++VL L N L ++ L L EL L QN I+RI +E L
Sbjct: 255 MDGAFWGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLS 314
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L L N L + SF+ L +L L +G N + +AD AF GL L LDLR
Sbjct: 315 ELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLR 367
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 56/183 (30%), Positives = 90/183 (49%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L +N + + + L+ + LS N + I +E +KL EL L N L
Sbjct: 264 NMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHL 323
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS-RIDQ--ACFE 252
S +++ +F+GL L L++ N + + D F L+ L+ LDL N IS I+ F
Sbjct: 324 SRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFS 383
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
GL LR L L N++RS+ +F L L L + N +L AF+ + +L L L
Sbjct: 384 GLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNT 443
Query: 313 AGL 315
+ L
Sbjct: 444 SSL 446
Score = 179 (68.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 57/206 (27%), Positives = 100/206 (48%)
Query: 123 KEANLDVIPITLNPSIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEP 181
K N+D + +++ L ++ N + K +D A S+++ + L HN L I
Sbjct: 226 KIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLYG 285
Query: 182 QEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
L EL L+ N ++ ++ + + L L+L N L L D F LS L L +G N
Sbjct: 286 LLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNN 345
Query: 242 RISRIDQACFEGLTALRILYLDDNQLR-SVPTPSFIYLGM--LAELRVGLNVFTTLADGA 298
++S I F GLT+L+ L L +N++ ++ S + G+ L +L + N ++ A
Sbjct: 346 KVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKA 405
Query: 299 FNGLGRLSALDLRGAGLTNMMGHSMA 324
F GL L LDL G + ++ ++ +
Sbjct: 406 FAGLDTLEHLDLSGNAIMSLQSNAFS 431
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 56/183 (30%), Positives = 91/183 (49%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S+Q + L N ++T+ + ++++ + L+ N + I E + L L L++N +S
Sbjct: 99 SLQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNIS 158
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPL-SHLEELDLGQNRISRIDQACFEGLT 255
+ F L+ LK L + N + + F L S L L L +NRIS I F+ L
Sbjct: 159 ELRT-AFPPLQ-LKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFK-LP 215
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L+ L L+ N++++V +F LG L L++ N T L DGAF GL + L L L
Sbjct: 216 QLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNL 275
Query: 316 TNM 318
T +
Sbjct: 276 TEI 278
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 50/178 (28%), Positives = 82/178 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ L L +N + +D S+ S L + + +N++ I F L L L +N++S
Sbjct: 313 LSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEIS 372
Query: 197 -SVNNKT--FIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
++ + + F GL L+ L L+GN + + + FA L LE LDL N I + F
Sbjct: 373 WTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQ 432
Query: 254 LTALRILYLD------DNQLRSVPT-------PSFIYLGML-AELRVGLNVFTTLADG 297
+ L+ L+L+ D QLR +P SF+ +L G ++FT DG
Sbjct: 433 MKKLQQLHLNTSSLLCDCQLRWLPQWVAENNFQSFVNASCAHPQLLKGRSIFTVSPDG 490
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 217 (81.4 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 57/160 (35%), Positives = 82/160 (51%)
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
++DLS N L + F L EL+L+ N+L+ + + F GL SLK+L L+ N L +
Sbjct: 67 YLDLSMNSLTELWPGVFHHLRFLEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGI 126
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
P L L+ L L N IS + FEGLT+LR L+LDDN L +P + +L L
Sbjct: 127 PAEALWELPGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQ 186
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ + LN + D AF L L L L + ++ HS
Sbjct: 187 AVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHS 226
Score = 210 (79.0 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 62/207 (29%), Positives = 91/207 (43%)
Query: 107 CPPDCDCNDETLV--VTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQH 163
CP C C + ++ V C E L +P L+P L L N + + L+
Sbjct: 32 CPVPCRCREAGILLWVDCSERGLSTVPAGLDPLTAYLDLSMNSLTELWPGVFHHLRFLEE 91
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ LS N+L +IP + F L L L +N+L + + L L+ L L N + +P
Sbjct: 92 LRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLISLVP 151
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
DR F L+ L L L N ++ I L AL+ + L N++ VP +F L L
Sbjct: 152 DRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVV 211
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N L +F GL L LDL
Sbjct: 212 LHLHNNRIRHLGAHSFEGLQNLETLDL 238
Score = 181 (68.8 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 56/179 (31%), Positives = 83/179 (46%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q L L N I V D + + +SL+H+ L N L IP+R L + L N+
Sbjct: 135 PGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNR 194
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ V + F L SL VL+L N + L F L +LE LDL N++ A + L
Sbjct: 195 IGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPVA-IQTL 253
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L +N +R++P +F+ +L + N + AF L L L L GA
Sbjct: 254 GRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPIQFVGRSAFQHLPGLHTLSLNGA 312
Score = 174 (66.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 56/172 (32%), Positives = 86/172 (50%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L NR+ + A SSL+ + L +N+L IP L L+L+ N +S
Sbjct: 89 LEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLIS 148
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V +++F GL SL+ L L N L ++P R + L L+ + L NRI R+ F L++
Sbjct: 149 LVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSS 208
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L +L+L +N++R + SF L L L + N A LGRL L
Sbjct: 209 LVVLHLHNNRIRHLGAHSFEGLQNLETLDLNCNQLHEFPV-AIQTLGRLQEL 259
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 58/181 (32%), Positives = 76/181 (41%)
Query: 135 NPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSH-NQLVNIP-IRGFEPQEKLVELQLN 191
NP +Q + N I+ V SA Q L + L+ + P +RG E L L
Sbjct: 277 NPLLQTIHFYDNPIQFVGRSAFQHLPGLHTLSLNGATDIQEFPDLRGTTSLESLT---LT 333
Query: 192 HNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACF 251
L + L L+VL L N +E LP LEE+ L NRI + F
Sbjct: 334 RAGLQRLPPGMCQQLPRLRVLELSHNLIEGLPS--LRGCQKLEEIGLQHNRIWEVRADTF 391
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
LT LR L L N +RS+ +F L L +L + N + L GLG L L LR
Sbjct: 392 RELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVLP---LAGLGGLVHLKLR 448
Query: 312 G 312
G
Sbjct: 449 G 449
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 214 (80.4 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 66/207 (31%), Positives = 97/207 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSL---QH 163
CP C+C+ T V+C L +P + + L L NR++ V Q +SSL +
Sbjct: 27 CPARCECSVPTRSVSCHRRRLAQVPEGIPIETRSLDLSKNRLRIVTP--QNFSSLLLLEE 84
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DLS+N L ++ F Q +L L+L N+L+ + GL L +L++ N L L
Sbjct: 85 LDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLVILL 144
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
D F L L+L N + I F GL +LR L L L +VPT + +L L
Sbjct: 145 DYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRSLTLQRCNLSTVPTHALAHLHGLTS 204
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
LR+ L F GL RL L++
Sbjct: 205 LRLRDLGIAELQAHTFKGLPRLKHLEV 231
Score = 178 (67.7 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 55/159 (34%), Positives = 78/159 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DLS N+L + + F L EL L++N LSSV +F L+ L LR N L LP
Sbjct: 61 LDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLP 120
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
A LS L LD+ QNR+ + FE LR+L L DN+L + +F L L
Sbjct: 121 RGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRS 180
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
L + +T+ A L L++L LR G+ + H+
Sbjct: 181 LTLQRCNLSTVPTHALAHLHGLTSLRLRDLGIAELQAHT 219
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 42/129 (32%), Positives = 67/129 (51%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++ L L+ N++ + A+ S L +D+S N+LV + GFE Q +L L+L+ N+
Sbjct: 104 PRLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNE 163
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L + + F GL SL+ L L+ L +P A L L L L I+ + F+GL
Sbjct: 164 LVFIAPRAFSGLASLRSLTLQRCNLSTVPTHALAHLHGLTSLRLRDLGIAELQAHTFKGL 223
Query: 255 TALRILYLD 263
L+ L +D
Sbjct: 224 PRLKHLEVD 232
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V +L +P G + + L L+ N+L V + F L L+ L+L N L +
Sbjct: 40 VSCHRRRLAQVP-EGIPIETR--SLDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVE 96
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L N+++ + + GL+ L +L + N+L + F L
Sbjct: 97 PNSFRAQPRLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRV 156
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYLH 330
L + N +A AF+GL L +L L+ L+ + H++A +LH
Sbjct: 157 LELSDNELVFIAPRAFSGLASLRSLTLQRCNLSTVPTHALA---HLH 200
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 217 (81.4 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 62/194 (31%), Positives = 107/194 (55%)
Query: 120 VTCKEANLDVIPITLNPS-IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIR 177
V+ K L+VIP + S ++ LVL N I ++ S ++ L+ +DLS N+L I +
Sbjct: 320 VSLKRNLLEVIPKFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELN 379
Query: 178 GFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELD 237
F LV L L+ N++++VN +F L +L L L N L LP R+F L+ L++L
Sbjct: 380 SFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLA 439
Query: 238 LGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA-D 296
L N++ I+ + F GL +++ L L N++R++ F + + + + +N ++L+
Sbjct: 440 LNFNQLE-INWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQ 498
Query: 297 GAFNGLGRLSALDL 310
G FN L +L L+L
Sbjct: 499 GLFN-LTKLRHLNL 511
Score = 200 (75.5 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 54/175 (30%), Positives = 91/175 (52%)
Query: 137 SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L+L +N I V+ + ++L ++LS+N+L +PIR F+ +L +L LN N+L
Sbjct: 386 NLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQL 445
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+N TF GL+S+K L L+ N + L D +F + +E +DL N+IS + + LT
Sbjct: 446 E-INWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLT 504
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N + + ++ + L L + N + L RL L+L
Sbjct: 505 KLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNL 559
Score = 184 (69.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 57/177 (32%), Positives = 92/177 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
I+ + L N+I ++ F + L+H++LS N + I + +E + L L L++N ++
Sbjct: 482 IETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAIN 541
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI--DQAC---F 251
+ L LK LNL N L+ L + F + +LEEL+L +NR+S I DQ+ F
Sbjct: 542 EFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPF 601
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
+GL LR L L N L+ + T + L L L +G N ++ AF + RL+ L
Sbjct: 602 KGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQVNAFEHMLRLNKL 658
Score = 170 (64.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 59/207 (28%), Positives = 98/207 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPS-IQRLVLKYNRIK-TVDSAIQFYSSLQHV 164
CP DC C + ++ C + +L+ +P+ PS +Q L L N++ T I+ +L V
Sbjct: 265 CPKDCKCLN--VLFDCDKLHLERVPVL--PSYVQTLHLANNKLNDTTVLEIRNLLNLTKV 320
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L N L IP F L L L +N ++S+++++ L L+ L+L N L +
Sbjct: 321 SLKRNLLEVIP--KFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIEL 378
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
F ++L L L N I+ +++ F L L L L +N+L ++P F L L +L
Sbjct: 379 NSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKL 438
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLR 311
+ N + F GL + L L+
Sbjct: 439 ALNFNQLE-INWSTFRGLESMKNLQLK 464
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/207 (25%), Positives = 95/207 (45%)
Query: 127 LDVIPI----TLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQ 182
L +PI LN +++L L +N+++ S + S++++ L N++ + F
Sbjct: 421 LSTLPIRVFKNLN-QLKKLALNFNQLEINWSTFRGLESMKNLQLKSNKIRALQDGVFYVM 479
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
K+ + L N++SS++ + L L+ LNL N + + + LE LDL N
Sbjct: 480 HKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNA 539
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL-----ADG 297
I+ + L L+ L L N+L+ + +F + L EL + N + + A
Sbjct: 540 INEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAA 599
Query: 298 AFNGLGRLSALDLRGAGLTNMMGHSMA 324
F GL +L LDL G L + +M+
Sbjct: 600 PFKGLRKLRRLDLHGNNLKQISTKAMS 626
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 40/131 (30%), Positives = 60/131 (45%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L +NKL+ L +L ++L+ N LE +P F LS L+ L L N I+ I
Sbjct: 296 LHLANNKLNDTTVLEIRNLLNLTKVSLKRNLLEVIPK--FIGLSGLKHLVLANNHITSIS 353
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
L LR L L N+L ++ SF L L + N T + + +F L L+
Sbjct: 354 SESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTD 413
Query: 308 LDLRGAGLTNM 318
L+L L+ +
Sbjct: 414 LELSNNRLSTL 424
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 213 (80.0 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 64/208 (30%), Positives = 97/208 (46%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQ 162
+A CP C+C+ T V C L IP + + L L NRI+ ++ + +L+
Sbjct: 21 AAGCPARCECSASTRTVACGRRRLTAIPEGIPAETRMLELSRNRIRCLNPGDLASLPTLE 80
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+DL+HN + ++ F +L L+L N+L + F L SL +L+L N L L
Sbjct: 81 ELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVIL 140
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F L L+ L++G N + I + F GL L L L+ L S+ S +L L
Sbjct: 141 LDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGLG 200
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR+ L D F L LS L++
Sbjct: 201 ALRLRHLAIAALEDQNFQKLPGLSHLEI 228
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 50/148 (33%), Positives = 75/148 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
++LS N++ + L EL LNHN ++ V F L L+VL LRGN L+ +P
Sbjct: 58 LELSRNRIRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIP 117
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+F L L LDL +N++ + F+ L +L+ L + DN L + +F L LAE
Sbjct: 118 PGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAE 177
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLR 311
L + T+L+ + L L AL LR
Sbjct: 178 LTLERCNLTSLSPESLGHLRGLGALRLR 205
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/172 (29%), Positives = 80/172 (46%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+S + V +L IP G + +++EL + N++ +N L +L+ L+L N
Sbjct: 32 ASTRTVACGRRRLTAIP-EGIPAETRMLEL--SRNRIRCLNPGDLASLPTLEELDLNHNV 88
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
+ + FA L L L L N++ I F L +L +L L +N+L + SF L
Sbjct: 89 IAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVILLDFSFQDL 148
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM----MGHSMALG 326
L L VG N ++ AF GL L+ L L LT++ +GH LG
Sbjct: 149 RSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGLG 200
Score = 135 (52.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 61/219 (27%), Positives = 90/219 (41%)
Query: 101 HQASAFCPPDCDCNDETLVVTCKEAN-LDVIP---ITLNPSIQRLVLKYNRIKTV-DSAI 155
H A P N L V N L +IP T S+ L L N++ + D +
Sbjct: 86 HNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVILLDFSF 145
Query: 156 QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLR 215
Q SLQ +++ N LV I R F L EL L L+S++ ++ L+ L L LR
Sbjct: 146 QDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGLGALRLR 205
Query: 216 GNFLEDLPDRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 274
+ L D+ F L L L++ + + GL L L + + +VP +
Sbjct: 206 HLAIAALEDQNFQKLPGLSHLEIDNWPLLEEVAPGSLRGLN-LTSLSITHTNITAVPAAA 264
Query: 275 FIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L L + N + + G+F L RL L L GA
Sbjct: 265 LRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGA 303
Score = 126 (49.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
+L + ++H + +P Q L L L+HN +S V +F L L+ L+L G L
Sbjct: 246 NLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGALL 305
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
+ + F L + L+L N +S +++ F + L L +D N L
Sbjct: 306 AVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPL 353
Score = 118 (46.6 bits), Expect = 0.00048, P = 0.00048
Identities = 33/119 (27%), Positives = 62/119 (52%)
Query: 128 DVIPITLNP-SIQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKL 185
+V P +L ++ L + + I V +A ++ + L ++LSHN + +P F +L
Sbjct: 236 EVAPGSLRGLNLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRL 295
Query: 186 VELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
EL L L+ + + F+GL+ +++LNL N L L + F ++ LE L + N ++
Sbjct: 296 RELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLA 354
>MGI|MGI:2145995 [details] [associations]
symbol:Amigo2 "adhesion molecule with Ig like domain 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=ISO] [GO:0007156 "homophilic cell adhesion"
evidence=ISO;ISS] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=ISO;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0043069
"negative regulation of programmed cell death" evidence=ISO;ISS]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2145995 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156
GeneTree:ENSGT00530000063545 CTD:347902 OMA:SCIAMNR
OrthoDB:EOG43XV36 EMBL:AY237006 EMBL:AB078880 IPI:IPI00281119
RefSeq:NP_001158035.1 RefSeq:NP_001158074.1 RefSeq:NP_835215.1
UniGene:Mm.24005 ProteinModelPortal:Q80ZD9 SMR:Q80ZD9 PRIDE:Q80ZD9
Ensembl:ENSMUST00000053106 GeneID:105827 KEGG:mmu:105827
InParanoid:Q80ZD9 NextBio:357900 Bgee:Q80ZD9 CleanEx:MM_AMIGO2
Genevestigator:Q80ZD9 GermOnline:ENSMUSG00000048218 Uniprot:Q80ZD9
Length = 519
Score = 212 (79.7 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 61/175 (34%), Positives = 87/175 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS---AIQFYS 159
AS CP C C T +V+C NL +P L I+RL L YNRI +D+ + F
Sbjct: 36 ASGMCPTACIC--ATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIGLLDADWIPVSFVK 93
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
L + L HN + +I F L L L+ N+L SV + TF LK+L+VL L N +
Sbjct: 94 -LSTLILRHNNITSISTGSFSTTPNLKCLDLSSNRLKSVKSATFQELKALEVLLLYNNHI 152
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG---LTALRILYLDDNQLRSVP 271
L F LSHL++L L N +++ + G L L L + N++ S+P
Sbjct: 153 SYLDPAAFGGLSHLQKLYLSGNFLTQFPMDLYTGRFKLADLTFLDVSYNRIPSIP 207
Score = 146 (56.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/126 (34%), Positives = 65/126 (51%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQE--KLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
++ +DLS+N+ + + + P KL L L HN ++S++ +F +LK L+L N
Sbjct: 69 IKRLDLSYNR-IGLLDADWIPVSFVKLSTLILRHNNITSISTGSFSTTPNLKCLDLSSNR 127
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L+ + F L LE L L N IS +D A F GL+ L+ LYL N L P +
Sbjct: 128 LKSVKSATFQELKALEVLLLYNNHISYLDPAAFGGLSHLQKLYLSGNFLTQFPMDLYTGR 187
Query: 279 GMLAEL 284
LA+L
Sbjct: 188 FKLADL 193
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 216 (81.1 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 61/189 (32%), Positives = 100/189 (52%)
Query: 137 SIQRLVLKY-----NRIKTVDSAI--QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQ 189
S R+ LKY NRI T+++ SSL V L+ N++ IP + F+ L L+
Sbjct: 163 SFPRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLPH-LQFLE 221
Query: 190 LNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQA 249
L N++ V TF GL SL+ L ++ N + L D F L+++EEL+L N ++R+++
Sbjct: 222 LKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKG 281
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 309
GL L+ LY+ N + + ++ + L+EL + N T L + AF GL L L+
Sbjct: 282 WLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLN 341
Query: 310 LRGAGLTNM 318
L +T++
Sbjct: 342 LGDNRVTHI 350
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 65/201 (32%), Positives = 99/201 (49%)
Query: 118 LVVTCKEANLDVIP--ITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNI 174
LVV + +IP I P +Q L LK NRIK V+ Q SL+ + + N + +
Sbjct: 195 LVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKL 254
Query: 175 PIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLE 234
F + EL+L HN L+ VN GL+ L+ L + N +E + + L
Sbjct: 255 KDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLS 314
Query: 235 ELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT-T 293
ELDL N+++R+D++ F GL+ L L L DN++ + F +L L L + N +
Sbjct: 315 ELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWA 374
Query: 294 LADG--AFNGLGRLSALDLRG 312
+ D AF GL L+ L L+G
Sbjct: 375 IEDASEAFAGLTSLTKLILQG 395
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 57/171 (33%), Positives = 95/171 (55%)
Query: 134 LNPSIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
LN +++ L L++N + V+ + LQ + +S N + I +E ++L EL L++
Sbjct: 262 LN-NMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSY 320
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS-RIDQA-- 249
N+L+ ++ F+GL L+ LNL N + + D +F LS+L+ LDL N IS I+ A
Sbjct: 321 NQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASE 380
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
F GLT+L L L NQ++S+ +FI L L L + N ++ + AF+
Sbjct: 381 AFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFS 431
Score = 193 (73.0 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 57/221 (25%), Positives = 102/221 (46%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDV-----IPITLNPSIQRLVLKYNRIKTVDSAIQFY 158
+ CP C C L C L + L P L +NR+ + +++
Sbjct: 40 AGLCPAPCSCRIPLL--DCSRRKLPAPSWRALSGLLPPDTAILDFSHNRLSNWNISLES- 96
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+LQ V +++N+L IP G EP + L L HN + +N + +L+ L+L N
Sbjct: 97 QTLQEVKMNYNELTEIPYFG-EPTSNITLLSLVHNIIPEINAQALQFYPALESLDLSSNI 155
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA-LRILYLDDNQLRSVPTPSFIY 277
+ ++ F P L+ L+L NRI+ ++ CF+ L++ L ++ L+ N++ +P P
Sbjct: 156 ISEIKTSSF-PRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIP-PKIFK 213
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L L + N + F GL L +L ++ G++ +
Sbjct: 214 LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKL 254
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 54/178 (30%), Positives = 85/178 (47%)
Query: 134 LNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
L+ S+ + L NR+ + I LQ ++L N++ + F+ + L L++ N
Sbjct: 190 LSSSLLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRN 249
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+S + + F GL +++ L L N L + L L++L + QN I RI +E
Sbjct: 250 GISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEF 309
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L L L NQL + +F+ L +L L +G N T +ADG F L L LDLR
Sbjct: 310 CQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLR 367
Score = 168 (64.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 53/185 (28%), Positives = 92/185 (49%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEP-QEKLVELQLNHNK 194
P+++ L L N I + ++ L++++LS+N++ + F+ L+ ++LN N+
Sbjct: 144 PALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNR 203
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+S + K F L L+ L L+ N ++ + F L L L + +N IS++ F GL
Sbjct: 204 MSMIPPKIF-KLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGL 262
Query: 255 TALRILYLDDNQLRSVPTPSFIY-LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+ L L+ N L V ++Y L ML +L V N ++ A+ RLS LDL
Sbjct: 263 NNMEELELEHNNLTRV-NKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYN 321
Query: 314 GLTNM 318
LT +
Sbjct: 322 QLTRL 326
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 61/217 (28%), Positives = 100/217 (46%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITL-NPSIQRLVLKYNRIKTVDSAIQFYSSLQ 162
S PPD T ++ L I+L + ++Q + + YN + + + S++
Sbjct: 70 SGLLPPD------TAILDFSHNRLSNWNISLESQTLQEVKMNYNELTEIPYFGEPTSNIT 123
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+ L HN + I + + L L L+ N +S + +F ++ LK LNL N + L
Sbjct: 124 LLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSFPRMQ-LKYLNLSNNRITTL 182
Query: 223 PDRLFAPLSH-LEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
F LS L + L +NR+S I F+ L L+ L L N+++ V +F L L
Sbjct: 183 EAGCFDNLSSSLLVVKLNRNRMSMIPPKIFK-LPHLQFLELKRNRIKIVEGLTFQGLDSL 241
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L++ N + L DGAF GL + L+L LT +
Sbjct: 242 RSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRV 278
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 50/192 (26%), Positives = 93/192 (48%)
Query: 137 SIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L ++ N I K D A ++++ ++L HN L + L +L ++ N +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + + L L+L N L L + F LS LE L+LG NR++ I F L+
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLS 359
Query: 256 ALRILYLDDNQLR-SVPTPSFIYLGM--LAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+ L L +N++ ++ S + G+ L +L + N ++ AF GL L LDL
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 313 AGLTNMMGHSMA 324
+ ++ ++ +
Sbjct: 420 NAIMSIQENAFS 431
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 43/134 (32%), Positives = 69/134 (51%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ L L YN++ +D SA S L+ ++L N++ +I F L L L +N++S
Sbjct: 313 LSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEIS 372
Query: 197 -SVNN--KTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
++ + + F GL SL L L+GN ++ + + F L LE LDL N I I + F
Sbjct: 373 WAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQ 432
Query: 254 LTALRILYLDDNQL 267
T L+ L L+ + L
Sbjct: 433 -THLKELILNTSSL 445
>UNIPROTKB|Q8N967 [details] [associations]
symbol:LRTM2 "Leucine-rich repeat and transmembrane
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 EMBL:CH471116 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HSSP:P07359 HOGENOM:HOG000290674
EMBL:AK095610 EMBL:AK124687 EMBL:BC146894 EMBL:BC146910
EMBL:BC150568 IPI:IPI00167619 RefSeq:NP_001034118.1
RefSeq:NP_001157397.1 RefSeq:NP_001157398.1 UniGene:Hs.585579
ProteinModelPortal:Q8N967 SMR:Q8N967 STRING:Q8N967
PhosphoSite:Q8N967 DMDM:74760021 PRIDE:Q8N967
Ensembl:ENST00000299194 Ensembl:ENST00000535041
Ensembl:ENST00000543818 GeneID:654429 KEGG:hsa:654429
UCSC:uc001qjt.2 CTD:654429 GeneCards:GC12P001929 HGNC:HGNC:32443
neXtProt:NX_Q8N967 PharmGKB:PA142671500 eggNOG:NOG248110
HOVERGEN:HBG081938 InParanoid:Q8N967 OMA:GEHEDQK OrthoDB:EOG4C5CKK
PhylomeDB:Q8N967 GenomeRNAi:654429 NextBio:123980
ArrayExpress:Q8N967 Bgee:Q8N967 CleanEx:HS_LRTM2
Genevestigator:Q8N967 GermOnline:ENSG00000166159 Uniprot:Q8N967
Length = 370
Score = 208 (78.3 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 55/165 (33%), Positives = 82/165 (49%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSS 160
+A CP C C+ +L V C L +P + + + L+L N++ + S A SS
Sbjct: 34 EALPTCPFSCKCDSRSLEVDCSGLGLTTVPPDVPAATRTLLLLNNKLSALPSWAFANLSS 93
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
LQ +DLS+N L +P F L ELQL +N + +++ L+ L+L N L
Sbjct: 94 LQRLDLSNNFLDRLPRSIFGDLTNLTELQLRNNSIRTLDRDLLRHSPLLRHLDLSINGLA 153
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
LP LF L L L L NR+ +D+ FE L L++L + DN
Sbjct: 154 QLPPGLFDGLLALRSLSLRSNRLQNLDRLTFEPLANLQLLQVGDN 198
Score = 140 (54.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 38/109 (34%), Positives = 55/109 (50%)
Query: 210 KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS 269
+ L L N L LP FA LS L+ LDL N + R+ ++ F LT L L L +N +R+
Sbjct: 71 RTLLLLNNKLSALPSWAFANLSSLQRLDLSNNFLDRLPRSIFGDLTNLTELQLRNNSIRT 130
Query: 270 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ + +L L + +N L G F+GL L +L LR L N+
Sbjct: 131 LDRDLLRHSPLLRHLDLSINGLAQLPPGLFDGLLALRSLSLRSNRLQNL 179
Score = 132 (51.5 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L +N+L +P F L L L++N L + F L +L L LR N + L
Sbjct: 75 LLNNKLSALPSWAFANLSSLQRLDLSNNFLDRLPRSIFGDLTNLTELQLRNNSIRTLDRD 134
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
L L LDL N ++++ F+GL ALR L L N+L+++ +F L L L+
Sbjct: 135 LLRHSPLLRHLDLSINGLAQLPPGLFDGLLALRSLSLRSNRLQNLDRLTFEPLANLQLLQ 194
Query: 286 VGLN 289
VG N
Sbjct: 195 VGDN 198
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 212 (79.7 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 63/198 (31%), Positives = 99/198 (50%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+QRL+L + I +D L+ + L+ N++ ++P + L +L L+HN L
Sbjct: 76 LQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALR 135
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ F L +L+ L L N L LP LF+ L L+ LDL +N ++ + Q
Sbjct: 136 DLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIK 195
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L L N+L S+ + LG L ELR+ N ++A GAF+ LG LS L L G
Sbjct: 196 LEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSG---- 251
Query: 317 NMMGHSMALGDYLH--WI 332
N++ S+ +LH W+
Sbjct: 252 NLL-ESLPPALFLHVSWL 268
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 62/191 (32%), Positives = 91/191 (47%)
Query: 124 EANLDVI-PITLNP--SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGF 179
++++ I P T N ++ L L N+I + AI L+ + L HN L ++ F
Sbjct: 83 DSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLDQNLF 142
Query: 180 EPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLG 239
+ L +L LN N+LS + F L LKVL+L N L LP L LE+L L
Sbjct: 143 QKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLY 202
Query: 240 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 299
NR+ +D L AL L L+ N LRS+ +F LG L+ L + N+ +L F
Sbjct: 203 SNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALF 262
Query: 300 NGLGRLSALDL 310
+ L+ L L
Sbjct: 263 LHVSWLTRLTL 273
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 59/193 (30%), Positives = 88/193 (45%)
Query: 122 CKEAN-LDVIPITLNPSIQRL-VLKYNRIKTV---DSAIQFYSSLQHVDLSHNQLVNIPI 176
C N L +P L S+ +L VL +R + L+ + L N+L+++
Sbjct: 152 CLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDS 211
Query: 177 RGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEEL 236
L EL+L N L S+ F L +L L L GN LE LP LF +S L L
Sbjct: 212 GLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRL 271
Query: 237 DLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN-VFTTLA 295
L +N + + + F + LR L+L+ LR++P +F L L L + N + + L
Sbjct: 272 TLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALP 331
Query: 296 DGAFNGLGRLSAL 308
G F+GL L L
Sbjct: 332 PGMFHGLTELRVL 344
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/183 (29%), Positives = 85/183 (46%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++L L +N ++ +D + Q +L+ + L+ NQL +P F KL L L+ N L+
Sbjct: 124 LEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLT 183
Query: 197 SVNNKTFIGLK-SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + +G + L+ L L N L L L A L L EL L +N + I F+ L
Sbjct: 184 HLP-QGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLG 242
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N L S+P F+++ L L + N L + F + L L L G L
Sbjct: 243 NLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHL 302
Query: 316 TNM 318
+
Sbjct: 303 RTL 305
Score = 153 (58.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 54/190 (28%), Positives = 81/190 (42%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N ++++ A +L + LS N L ++P F L L L N L
Sbjct: 219 ALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPL 278
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI-SRIDQACFEGL 254
+ F + L+ L L G L LP F LS L+ L L +N + S + F GL
Sbjct: 279 EELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGL 338
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
T LR+L + N L +P + LG L ++ + N L F L L + L
Sbjct: 339 TELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQ 398
Query: 315 LTNMMGHSMA 324
L + G A
Sbjct: 399 LKTLPGDVFA 408
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/155 (29%), Positives = 75/155 (48%)
Query: 138 IQRLVLKYNRIKTVDSAIQF--YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+ RL L N ++ + + F + L+ + L+ L +P F L L L N L
Sbjct: 268 LTRLTLFENPLEELPEVL-FGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPL 326
Query: 196 -SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S++ F GL L+VL + N LE+LP+ L L ++ L NR+ + + F L
Sbjct: 327 LSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNL 386
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
++L + L+ NQL+++P F L L + +G N
Sbjct: 387 SSLVTVQLEHNQLKTLPGDVFAALPQLTRVLLGHN 421
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/150 (30%), Positives = 67/150 (44%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
++L H+ L + F L L L+ + +S+++ TF L LK L L N
Sbjct: 50 TNLTHILLFRMDRGVLQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNK 109
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
+ LP + + LE+L L N + +DQ F+ L LR L L+ NQL +P F L
Sbjct: 110 ISHLPRAILDKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSL 169
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
G L L + N T L G +L L
Sbjct: 170 GKLKVLDLSRNNLTHLPQGLLGAQIKLEKL 199
Score = 143 (55.4 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 52/176 (29%), Positives = 80/176 (45%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
+++ L L N++ + + + F S L+ +DLS N L ++P Q KL +L L N+
Sbjct: 147 NLRDLCLNQNQLSFLPANL-FSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNR 205
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L S+++ L +L L L N L + F L +L L L N + + A F +
Sbjct: 206 LMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHV 265
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+ L L L +N L +P F + L EL + TL AF L L L L
Sbjct: 266 SWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGL 321
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/172 (28%), Positives = 77/172 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSS-LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L N ++++ A+ + S L + L N L +P F L EL LN L
Sbjct: 243 NLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHL 302
Query: 196 SSVNNKTFIGLKSLKVLNLRGN-FLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++ F L L+ L L N L LP +F L+ L L + N + + + GL
Sbjct: 303 RTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGL 362
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 306
LR + L N+LR++P F L L +++ N TL F L +L+
Sbjct: 363 GRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLT 414
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 198 VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL 257
+ + +F G+ L+ L L + + + F L L+ L L +N+IS + +A + + L
Sbjct: 65 LQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLL 124
Query: 258 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 317
L+LD N LR + F L L +L + N + L F+ LG+L LDL LT+
Sbjct: 125 EQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTH 184
Query: 318 M 318
+
Sbjct: 185 L 185
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 217 (81.4 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 61/185 (32%), Positives = 95/185 (51%)
Query: 149 KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKS 208
K+ S+ L+++D+SHN V +P GF +L L +N+N +S + +K GLK+
Sbjct: 267 KSSSSSTSCSLDLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKN 326
Query: 209 LKVLNLRGNFLEDLPDRLFAPLSHL-EELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
L++LNL N + LP LFA + + +E+ L N IS ++ F L L+ L L NQ+
Sbjct: 327 LQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQI 386
Query: 268 RS--VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMAL 325
S + +F+ L L L + N T L F+ L L L+LR L N+ + A
Sbjct: 387 TSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAP 446
Query: 326 GDYLH 330
+ LH
Sbjct: 447 MNNLH 451
Score = 205 (77.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 64/194 (32%), Positives = 99/194 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYSSL---QHVDLSHNQLVN--IPIRGFEPQEKLVELQLNH 192
IQ + L+ N I ++ Q +S+L Q +DLS NQ+ + I F +LV L L+H
Sbjct: 352 IQEVYLQNNSISVLNP--QLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSH 409
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
NKL+ + + F L +L++LNLR N LE++ FAP+++L L L N++ +D
Sbjct: 410 NKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALN 469
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
GL L +L LD+N L V +F L +L + N T+ A + L +DL G
Sbjct: 470 GLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPL-ALRNMRHLRTVDL-G 527
Query: 313 AGLTNMMGHSMALG 326
+ +M S G
Sbjct: 528 ENMITVMEDSAFKG 541
Score = 176 (67.0 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 60/189 (31%), Positives = 90/189 (47%)
Query: 138 IQRLVLKYNRIKT--VDSAIQFYSSLQHV--DLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
+Q L L N+I + +D F ++ V +LSHN+L + F L L L HN
Sbjct: 376 LQALDLSMNQITSTWIDKNT-FVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHN 434
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+L ++ TF + +L L L N L+ L L L L L N + + F
Sbjct: 435 QLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRN 494
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+AL+ L L+ NQL++VP + + L + +G N+ T + D AF GLG L L L G
Sbjct: 495 CSALQDLNLNGNQLKTVPL-ALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGN 553
Query: 314 GLTNMMGHS 322
L N+ H+
Sbjct: 554 YLENITMHT 562
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/186 (30%), Positives = 94/186 (50%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF--YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
++Q L L++N+++ + +A F ++L + LSHN+L + L L L++N
Sbjct: 425 TLQILNLRHNQLENI-AADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNA 483
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L V+ F +L+ LNL GN L+ +P L + HL +DLG+N I+ ++ + F+GL
Sbjct: 484 LIGVHPDAFRNCSALQDLNLNGNQLKTVPLAL-RNMRHLRTVDLGENMITVMEDSAFKGL 542
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L N L ++ +F L L L + N + GAF + A+ L G
Sbjct: 543 GNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNE 602
Query: 315 LTNMMG 320
L ++ G
Sbjct: 603 LNDING 608
Score = 156 (60.0 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 48/170 (28%), Positives = 86/170 (50%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEAN-LDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSS 160
A F P + N TL+++ + LD + + L L N + V A + S+
Sbjct: 441 ADTFAPMN---NLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSA 497
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
LQ ++L+ NQL +P+ L + L N ++ + + F GL +L L L GN+LE
Sbjct: 498 LQDLNLNGNQLKTVPL-ALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLE 556
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSV 270
++ F L +L+ L+L +NRI+ ++ FE ++++ + LD N+L +
Sbjct: 557 NITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDI 606
Score = 136 (52.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 169 NQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFA 228
N V + F ++ L L N++ ++ + N TF GLK L +L+L N + L F
Sbjct: 869 NNFVELAGHSFLGRKNLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFH 928
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
L +L EL L N+I+ I F+ L L +L LD N+L
Sbjct: 929 NLENLRELYLQSNKIASIANGSFQMLRKLEVLRLDGNRL 967
Score = 132 (51.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 50/163 (30%), Positives = 84/163 (51%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHN 193
P++Q L L NRI V+ A + SS+Q V L N+L +I G F L+ L ++ N
Sbjct: 567 PNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDI--NGLFSNMPSLLWLNISDN 624
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR--LFAPLSHLEELDLGQNRISRIDQACF 251
+L S + +L+ L+L N L L +R L + L L+ LD+ N++ RI +
Sbjct: 625 RLESFDYGHVPS--TLQWLDLHKNRLSSLSNRFGLDSELK-LQTLDVSFNQLQRIGPSSI 681
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 294
++ +L+L+DN + +V +F++ L + + N TTL
Sbjct: 682 PN--SIELLFLNDNLITTVDPDTFMHKTNLTRVDLYANQITTL 722
Score = 131 (51.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++Q L L N++KTV A++ L+ VDL N + + F+ L L+L N L
Sbjct: 497 ALQDLNLNGNQLKTVPLALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLE 556
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ TF L +L++LNL N + + F S ++ + L N ++ I+ F + +
Sbjct: 557 NITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNELNDIN-GLFSNMPS 615
Query: 257 LRILYLDDNQLRS 269
L L + DN+L S
Sbjct: 616 LLWLNISDNRLES 628
Score = 115 (45.5 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 35/118 (29%), Positives = 54/118 (45%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L + GN +L F +L L + ++ I F GL L IL+L+DN + S+
Sbjct: 864 LYIDGNNFVELAGHSFLGRKNLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLE 923
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
F L L EL + N ++A+G+F L +L L L G L + ++ YL
Sbjct: 924 GNEFHNLENLRELYLQSNKIASIANGSFQMLRKLEVLRLDGNRLMHFEVWQLSANPYL 981
Score = 107 (42.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 187 ELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI 246
EL ++ N + +F+G K+L VL + + + + F+ L L L L N I +
Sbjct: 863 ELYIDGNNFVELAGHSFLGRKNLAVLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISL 922
Query: 247 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+ F L LR LYL N++ S+ SF L L LR+ N
Sbjct: 923 EGNEFHNLENLRELYLQSNKIASIANGSFQMLRKLEVLRLDGN 965
Score = 63 (27.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 110 DCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSH 168
D + +TL V+ + + P ++ SI+ L L N I TVD ++L VDL
Sbjct: 658 DSELKLQTLDVSFNQLQR-IGPSSIPNSIELLFLNDNLITTVDPDTFMHKTNLTRVDLYA 716
Query: 169 NQLVNIPIR 177
NQ+ + I+
Sbjct: 717 NQITTLDIK 725
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 215 (80.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 63/212 (29%), Positives = 96/212 (45%)
Query: 102 QASAFCPPDCDCNDETLVVT--CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS 159
+A+ CP C C ++ ++++ C E L +P L+P L L N + + + +
Sbjct: 28 RAAPACPAPCRCQEDGIMLSADCSELGLSAVPRDLDPLTAYLDLSMNNLTELQPGLFHHL 87
Query: 160 S-LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
L+ + LS N L +IP F L L L +N+L V L SL+ L L N
Sbjct: 88 RFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALWELPSLQSLRLDANL 147
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
+ +P+R F LS L L L N ++ I L AL+ + L N++ +P +F L
Sbjct: 148 ISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNL 207
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L + N L +F GL L LDL
Sbjct: 208 TSLVVLHLHNNRIQHLGTHSFEGLHNLETLDL 239
Score = 210 (79.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 57/160 (35%), Positives = 81/160 (50%)
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
++DLS N L + F L EL+L+ N LS + F GL SLK+L L+ N L +
Sbjct: 68 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGV 127
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
P L L+ L L N IS + + FEGL++LR L+LDDN L +P + L L
Sbjct: 128 PADALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQ 187
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ + LN + + D AF L L L L + ++ HS
Sbjct: 188 AMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHS 227
Score = 190 (71.9 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 56/179 (31%), Positives = 85/179 (47%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+Q L L N I V + + + SSL+H+ L N L IP+R L + L N+
Sbjct: 136 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 195
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+S + + F L SL VL+L N ++ L F L +LE LDL N + A L
Sbjct: 196 ISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPVA-IRTL 254
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L +N ++++P +F+ +L + N + AF L +L L L GA
Sbjct: 255 GRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQDLPKLHTLSLNGA 313
Score = 176 (67.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 56/172 (32%), Positives = 84/172 (48%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N + + A SL+ + L +NQL +P L L+L+ N +S
Sbjct: 90 LEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALWELPSLQSLRLDANLIS 149
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V ++F GL SL+ L L N L ++P R L L+ + L NRIS I F+ LT+
Sbjct: 150 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTS 209
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L +L+L +N+++ + T SF L L L + N A LGRL L
Sbjct: 210 LVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNELQEFPV-AIRTLGRLQEL 260
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L I+ + + Q L+ ++LSHNQ+ +P +KL E+ L HN++
Sbjct: 327 SLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQIEELP--SLHRCQKLEEIGLQHNRI 384
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ TF L SL+ L+L N + + F L L +LDL N++S + A GL
Sbjct: 385 GAIGADTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLSTLPLAGLGGLM 444
Query: 256 ALRI 259
L++
Sbjct: 445 HLKL 448
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/175 (26%), Positives = 74/175 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN ++ AI+ LQ + +N + IP + F L + N +
Sbjct: 233 NLETLDLNYNELQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQ 292
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L L+L G +++ PD + LE L L + I + + L
Sbjct: 293 CVGRSAFQDLPKLHTLSLNGATDIQEFPD--LKGTTSLEILTLTRAGIRLLPPGMCQQLP 350
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR+L L NQ+ +P S L E+ + N + F+ L L ALDL
Sbjct: 351 RLRVLELSHNQIEELP--SLHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALDL 403
Score = 129 (50.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 41/107 (38%), Positives = 54/107 (50%)
Query: 206 LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
L L+VL L N +E+LP LEE+ L NRI I F L++LR L L N
Sbjct: 349 LPRLRVLELSHNQIEELPS--LHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALDLSWN 406
Query: 266 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
+RS+ +F+ L L +L + N +TL GLG L L LRG
Sbjct: 407 AIRSIHPEAFVTLRSLVKLDLTDNQLSTLP---LAGLGGLMHLKLRG 450
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 215 (80.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 57/160 (35%), Positives = 82/160 (51%)
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
++DLS N L + F L EL+L+ N LS + + F GL SLK+L L+ N L +
Sbjct: 70 YLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGI 129
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
P L L+ L L N IS + + FEGL++LR L+LDDN L +P + L L
Sbjct: 130 PAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQ 189
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ + LN + + D AF L L L L + ++ HS
Sbjct: 190 AMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHS 229
Score = 214 (80.4 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 61/207 (29%), Positives = 95/207 (45%)
Query: 107 CPPDCDCNDETLVVT--CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSS-LQH 163
CP C C ++ ++++ C E L +P L+P L L N + + + + L+
Sbjct: 35 CPAPCHCQEDGIMLSADCSELGLSAVPGDLDPLTAYLDLSMNNLTELQPGLFHHLRFLEE 94
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ LS N L +IP + F L L L +N+L + + L SL+ L L N + +P
Sbjct: 95 LRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVP 154
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+R F LS L L L N ++ I L AL+ + L N++ +P +F L L
Sbjct: 155 ERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVV 214
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N L +F GL L LDL
Sbjct: 215 LHLHNNRIQHLGTHSFEGLHNLETLDL 241
Score = 189 (71.6 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 56/179 (31%), Positives = 86/179 (48%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+Q L L N I V + + + SSL+H+ L N L IP+R L + L N+
Sbjct: 138 PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 197
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+S + + F L SL VL+L N ++ L F L +LE LDL N++ A L
Sbjct: 198 ISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPVA-IRTL 256
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L +N ++++P +F+ +L + N + AF L +L L L GA
Sbjct: 257 GRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLNGA 315
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 57/172 (33%), Positives = 84/172 (48%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N + + A SL+ + L +NQL IP L L+L+ N +S
Sbjct: 92 LEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLIS 151
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V ++F GL SL+ L L N L ++P R L L+ + L NRIS I F+ LT+
Sbjct: 152 LVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTS 211
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L +L+L +N+++ + T SF L L L + N A LGRL L
Sbjct: 212 LVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNKLQEFPV-AIRTLGRLQEL 262
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L I+ + S + Q L+ ++LSHNQ+ +P +KL E+ L HN++
Sbjct: 329 SLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELP--SLHRCQKLEEIGLQHNRI 386
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ TF L SL+ L+L N + + F+ L L +LDL N+++ + A GL
Sbjct: 387 WEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTLPLAGLGGLM 446
Query: 256 ALRI 259
L++
Sbjct: 447 HLKL 450
Score = 136 (52.9 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 47/175 (26%), Positives = 75/175 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN+++ AI+ LQ + +N + IP + F L + N +
Sbjct: 235 NLETLDLNYNKLQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQ 294
Query: 197 SVNNKTFIGLKSLKVLNLRGNF-LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L L+L G +++ PD + LE L L + I + + L
Sbjct: 295 FVGRSAFQYLPKLHTLSLNGAMDIQEFPD--LKGTTSLEILTLTRAGIRLLPSGMCQQLP 352
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR+L L NQ+ +P S L E+ + N + F+ L L ALDL
Sbjct: 353 RLRVLELSHNQIEELP--SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDL 405
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 216 (81.1 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 55/184 (29%), Positives = 90/184 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C T V C L IP + + +RL L N I + + L+ +
Sbjct: 34 CPALCTCTGTT--VDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQ 91
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L NQ+ + F+ ++L L+LN N+L + F ++L L+L NFL+ +P +
Sbjct: 92 LMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRK 151
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F + L+ L L +NRIS I++ F L L +L L++N + ++P SF ++ L R
Sbjct: 152 AFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFR 211
Query: 286 VGLN 289
+ N
Sbjct: 212 LHSN 215
Score = 192 (72.6 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 50/164 (30%), Positives = 80/164 (48%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C+ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 278 SSGSCPAMCSCSSG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKL 335
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F+ L L L NK++ + F GL +L++L L N +
Sbjct: 336 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ F L +L L L N+I + + F L A++ L+L N
Sbjct: 396 IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L +P + ++ L L N+ V + + LQ VDL
Sbjct: 734 CPQECACLDT--VVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + L + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGI 851
Query: 227 FAPLSHLEELDLGQN 241
FA ++ L L +G N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 179 (68.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 58/167 (34%), Positives = 84/167 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
V+ S +L IP R PQ EL+LN+N++S + F L LK +NL N + ++
Sbjct: 524 VECSSLKLSKIPER--IPQST-TELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEI 580
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F + + EL L N++ I F GL LR L L +N++ + SF L +
Sbjct: 581 EDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVR 640
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT++ GAF+ L LS L+L A N H LGD+L
Sbjct: 641 LLSLYDNHITTISPGAFDTLQALSTLNLL-ANPFNCNCHLSWLGDWL 686
Score = 178 (67.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 52/158 (32%), Positives = 74/158 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E VV C L IP + S L L N I +++ F S L+ +
Sbjct: 513 CPHKCRC--EASVVECSSLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKI 570
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE + EL L N+L S+ + F GL L+ L LR N + + +
Sbjct: 571 NLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F L ++ L L N I+ I F+ L AL L L
Sbjct: 631 DSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 45/149 (30%), Positives = 73/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ ++L+ N + I F ++L LQL N++ +V F +K L+ L L N L+
Sbjct: 64 ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQV 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N + + + F G T L+ L LD N++ + +F L L
Sbjct: 124 LPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N TT+ +FN + +L L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 167 (63.8 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + +IP F P KL + L++N+++ + F GL+SL L L GN +
Sbjct: 310 TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKI 369
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I+ I F+ L L +L L DN+++S+ +F L
Sbjct: 370 TDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 429
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 430 AIQTLHLAQNPF 441
Score = 157 (60.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L+LN N ++ ++ F GLK L+VL L N + + F + LE L L +N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ AL L L +N L++VP +F L L++ N + + +GAF L L
Sbjct: 126 ELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEV 185
Query: 308 LDLRGAGLTNM 318
L L +T +
Sbjct: 186 LTLNNNNITTI 196
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 160 SLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S + L++N++ + G F+ L ++ L++NK+S + + TF G S+ L+L N
Sbjct: 541 STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQ 600
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
LE + +F L L L L NRIS I F GL +R+L L DN + ++ +F L
Sbjct: 601 LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTL 660
Query: 279 GMLAELRVGLNVF 291
L+ L + N F
Sbjct: 661 QALSTLNLLANPF 673
Score = 134 (52.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 42/128 (32%), Positives = 58/128 (45%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I V+ A L+ + L+ NQL +P F+ + L L L+ N L +V
Sbjct: 90 LQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFLQAVP 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G LK L L N + + + F L LE L L N I+ I + F + LR
Sbjct: 150 RKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT 209
Query: 260 LYLDDNQL 267
L N L
Sbjct: 210 FRLHSNHL 217
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
E + E++L N + S+ F + L+ ++L N + ++ F L L L L N+
Sbjct: 309 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 368
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + + F GL L++L L+ N++ + +F L L+ L + N +LA G F L
Sbjct: 369 ITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Query: 303 GRLSALDL 310
+ L L
Sbjct: 429 RAIQTLHL 436
Score = 68 (29.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 312 GAGLTNM 318
G +T++
Sbjct: 366 GNKITDL 372
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 213 (80.0 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 66/184 (35%), Positives = 96/184 (52%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++RL L+YN+I+++ + S L+ + L +N L + P KL L N N++S
Sbjct: 85 LRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEIS 144
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ +F GL+SL L L GN L LPD +FAPL +L L L NRI + + F L
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGK 204
Query: 257 LRILYLDDNQLR-SVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
LR L L N+L+ S+ +F L L+ L + N L F L RL L LRG
Sbjct: 205 LRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQ 264
Query: 315 LTNM 318
LT++
Sbjct: 265 LTHL 268
Score = 195 (73.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 67/224 (29%), Positives = 103/224 (45%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKY----NRIKTVDSAIQFY 158
A CP CDC ++ C L V+P T + VL Y N I + +A F+
Sbjct: 23 AEPVCPERCDCQHPQHLL-CTNRGLRVVPKTSSLPSPHDVLTYSLGGNFITNI-TAFDFH 80
Query: 159 --SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRG 216
L+ +DL +NQ+ ++ + FE +L EL L +N L ++ T L+ L++L G
Sbjct: 81 RLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANG 140
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 276
N + L F L L +L L N + + A F L L L+L+ N++R + +F
Sbjct: 141 NEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFA 200
Query: 277 YLGMLAELRVGLNVFT-TLADGA-FNGLGRLSALDLRGAGLTNM 318
LG L L + N +L A F L LS+L L L ++
Sbjct: 201 QLGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHL 244
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/157 (35%), Positives = 75/157 (47%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N + NI F +L L L +N++ S++ KTF L L+ L L N L+ L
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPG 125
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
APL L L N ISR+ + FEGL +L L LD N L ++P F LG L L
Sbjct: 126 TLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLH 185
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ N L AF LG+L L+L L + H+
Sbjct: 186 LESNRIRFLGKNAFAQLGKLRFLNLSANELQPSLRHA 222
Score = 186 (70.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 71/224 (31%), Positives = 106/224 (47%)
Query: 116 ETLVVTCKEAN-LDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHVDLSHNQ 170
E+LV + N L +P + + L+ L+ NRI+ + +A L+ ++LS N+
Sbjct: 155 ESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANE 214
Query: 171 LVNIPIRG---FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLF 227
L +R F P L L L+ N L + + F L L +L+LRGN L L F
Sbjct: 215 L-QPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAF 273
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
L L EL L NR+S++ A E L +L L L N+L ++ +F +LG L EL +
Sbjct: 274 WGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLR 333
Query: 288 LNVFTTLADGAFNGLGRLSALDLRGAGLT---NMMGHSMALGDY 328
N + L+ F L LDL G G T + G +GD+
Sbjct: 334 NNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGDW 377
Score = 174 (66.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 62/197 (31%), Positives = 92/197 (46%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ +L L N + + D+ +L ++ L N++ + F KL L L+ N+L
Sbjct: 156 SLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKLRFLNLSANEL 215
Query: 196 S-SVNNK-TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
S+ + TF L+SL L L N L+ L R+F L L L L N+++ + F G
Sbjct: 216 QPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWG 275
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L ALR L L+ N+L +PT L L L + N + L F LGRL L LR
Sbjct: 276 LEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNN 335
Query: 314 GLTNMMGHSMALGDYLH 330
L+ + G A L+
Sbjct: 336 ALSALSGDIFAASPALY 352
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 41/121 (33%), Positives = 58/121 (47%)
Query: 213 NLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 272
+L GNF+ ++ F L L LDL N+I + FE L+ L LYL +N L+++
Sbjct: 65 SLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAP 124
Query: 273 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA-LGD--YL 329
+ L L L N + L+ G+F GL L L L G L + A LG+ YL
Sbjct: 125 GTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYL 184
Query: 330 H 330
H
Sbjct: 185 H 185
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 47/135 (34%), Positives = 73/135 (54%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP DC C + VV C +L +P +I L L N++ TV + + SLQ VDL
Sbjct: 727 CPADCTCLES--VVRCSNKHLQALPKGTPRNITELYLDGNQLSTVPKELSSFKSLQLVDL 784
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + +LPD +
Sbjct: 785 SNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGI 844
Query: 227 FAPLSHLEELDLGQN 241
F+ L L +G N
Sbjct: 845 FSDAQSLSHLAIGAN 859
Score = 206 (77.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 52/184 (28%), Positives = 89/184 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C+ T V C L IP + + +RL L N + ++ + L+ +
Sbjct: 27 CPALCTCSGTT--VDCHGLGLKNIPRNIPRNTERLELNGNNLTRINRNDFTGLKYLRVLQ 84
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L NQ+V + F+ +L L+LN N+L + F +L L+L NF++ +P +
Sbjct: 85 LMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSENFIQAIPRK 144
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F + ++ L L +N IS I+ F + L +L L++N + S+P SF ++ L R
Sbjct: 145 AFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFR 204
Query: 286 VGLN 289
+ N
Sbjct: 205 LHSN 208
Score = 201 (75.8 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 51/164 (31%), Positives = 82/164 (50%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C CN+ +V C+ +IP +L S+ + L+ N IK++ A Y L
Sbjct: 271 SSGSCPAVCSCNNN--IVDCRGKGPTLIPSSLPDSMTEIRLEQNSIKSIPPGAFSPYKKL 328
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ + F+ L L L NK++ + F GL +L++L L N +
Sbjct: 329 RRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVFDGLHALQLLLLNANKIHC 388
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
L F L +L L L N+I + + F L A++ L+L N
Sbjct: 389 LRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTLHLAQN 432
Score = 174 (66.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS--AIQFYSSLQHV 164
CP C C E+ VV C LD IP + S L N I T+++ A + + L+ +
Sbjct: 506 CPAKCRC--ESNVVDCSNLRLDRIPEHVPASTTEPRLNNNEITTIEAMGAFKTLTHLKKI 563
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE + EL L N+L ++ F GL+ L++L LR N + + +
Sbjct: 564 NLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHN 623
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F L ++ L L N ++ I F+ L +L L L
Sbjct: 624 NSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNL 661
Score = 167 (63.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
S+ + L N + +IP F P +KL + L++N++S + F GL+SL L L GN +
Sbjct: 303 SMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 362
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I + F+ L L +L L DN+++++ +F L
Sbjct: 363 TDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLR 422
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 423 AIQTLHLAQNPF 434
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 49/148 (33%), Positives = 75/148 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK-TFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP P E +LN+N+++++ F L LK +NL N + ++
Sbjct: 517 VDCSNLRLDRIPEH--VPAST-TEPRLNNNEITTIEAMGAFKTLTHLKKINLSNNKISEI 573
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F S + EL L N++ F GL LR+L L +N++ + SF L +
Sbjct: 574 EDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVR 633
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N TT+A GAF+ L LS L+L
Sbjct: 634 LLSLYDNTLTTIAPGAFDTLQSLSTLNL 661
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L NIP R P+ L+LN N L+ +N F GLK L+VL L N + +
Sbjct: 38 VDCHGLGLKNIP-RNI-PRNT-ERLELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVE 94
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F + LE L L +N++ ++ + F+ AL L L +N ++++P +F +
Sbjct: 95 RGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKN 154
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L++ N + + DGAF + L L L ++++
Sbjct: 155 LQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISSI 189
Score = 156 (60.0 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 44/154 (28%), Positives = 72/154 (46%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ ++L+ N L I F + L LQL N++ +V F ++ L+ L L N L
Sbjct: 57 ERLELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQ 116
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF + L LDL +N I I + F G T ++ L LD N + + +F + L
Sbjct: 117 LPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGL 176
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L + N +++ +FN + +L L L
Sbjct: 177 EVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNL 210
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/127 (33%), Positives = 65/127 (51%)
Query: 166 LSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L++N++ I G F+ L ++ L++NK+S + + F G S+ L+L N L+
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHS 599
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
+F L L L L NRIS I F GL +R+L L DN L ++ +F L L+ L
Sbjct: 600 GMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTL 659
Query: 285 RVGLNVF 291
+ N F
Sbjct: 660 NLLANPF 666
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
+ + E++L N + S+ F K L+ ++L N + +L F L L L L N+
Sbjct: 302 DSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 361
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + + F+GL AL++L L+ N++ + +F L L+ L + N TLA G F+ L
Sbjct: 362 ITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSL 421
Query: 303 GRLSALDL 310
+ L L
Sbjct: 422 RAIQTLHL 429
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 49/164 (29%), Positives = 70/164 (42%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I TV+ A L+ + L+ NQL +P F+ L L L+ N + ++
Sbjct: 83 LQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSENFIQAIP 142
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G +K L L N + + D F + LE L L N IS I + F + LR
Sbjct: 143 RKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRT 202
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA-FNGL 302
L N L V +L R + +FT + A GL
Sbjct: 203 FRLHSNNL--VCDCVLSWLSQWLRERPNIGLFTQCSSPAPLRGL 244
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P+ + EL L+ N+LS+V K KSL++++L N + L
Sbjct: 738 VRCSNKHLQALP-KG-TPRN-ITELYLDGNQLSTVP-KELSSFKSLQLVDLSNNRISSLT 793
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F +S L L L N + I F GL +LR+L L N + +P F L+
Sbjct: 794 NSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSH 853
Query: 284 LRVGLN 289
L +G N
Sbjct: 854 LAIGAN 859
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 60/207 (28%), Positives = 90/207 (43%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQR-LVLKYNRIKTVDSAIQFYSSLQHVDL 166
P +C+C L + + +T NP R LK ++ V +A F H D+
Sbjct: 665 PFNCNCRLAWLSSWLRNRKI----VTGNPRCHRPAFLKEIPLQDV-AAPDFRCEDDHEDV 719
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S V+ P E +V H L ++ T +++ L L GN L +P L
Sbjct: 720 SCAPPVHCPA-DCTCLESVVRCSNKH--LQALPKGT---PRNITELYLDGNQLSTVPKEL 773
Query: 227 FAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
+ L+ +DL NRIS + + F ++ L L L N LR +PT +F L L L +
Sbjct: 774 -SSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSL 832
Query: 287 GLNVFTTLADGAFNGLGRLSALDLRGA 313
N + L DG F+ LS L + GA
Sbjct: 833 HGNDISELPDGIFSDAQSLSHLAI-GA 858
Score = 115 (45.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKL 195
++++ L N+I + D A + SS+ + L+ NQL ++ G F E L L L +N++
Sbjct: 560 LKKINLSNNKISEIEDGAFEGASSVNELHLTANQL-DLAHSGMFRGLEGLRMLMLRNNRI 618
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
S ++N +F GL ++++L+L N L + F L L L+L N
Sbjct: 619 SCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLAN 664
Score = 84 (34.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 22/87 (25%), Positives = 43/87 (49%)
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
++ EL L N++S + + +L+++ L +N++ S+ SF + L L + N
Sbjct: 755 NITELYLDGNQLSTVPKE-LSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNAL 813
Query: 292 TTLADGAFNGLGRLSALDLRGAGLTNM 318
+ AF+GL L L L G ++ +
Sbjct: 814 RCIPTLAFSGLRSLRLLSLHGNDISEL 840
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 57/185 (30%), Positives = 99/185 (53%)
Query: 135 NPSIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
NP++ ++V ++ + A L+ ++++ + +N+ F L +L LN N
Sbjct: 72 NPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFN 131
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L ++ F L +L+ L+L+GN L+ LP RLF PL+HL+ L+L QN ++++ + F
Sbjct: 132 MLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHP 191
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
LT+L+ L L +N L +P F LG L EL + N + L F+ L L L L+
Sbjct: 192 LTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRN 251
Query: 314 GLTNM 318
+T++
Sbjct: 252 AITHL 256
Score = 208 (78.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 60/213 (28%), Positives = 96/213 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CP CDC + V C + L +P+ + P + ++ T+++ A +L V
Sbjct: 22 CPMGCDCFVQE--VFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLTKVV 79
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
+ QL F +L +L++ + +++ F L SL L L N LE LP+
Sbjct: 80 FLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPEG 139
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
LF L+ LE L L N++ + + F+ LT L+ L L N L +P F L L L+
Sbjct: 140 LFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLK 199
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N + L G F LG L L L ++ +
Sbjct: 200 LSNNALSGLPQGVFGKLGSLQELFLDSNNISEL 232
Score = 203 (76.5 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 61/195 (31%), Positives = 90/195 (46%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ +L L +N ++ + + Q ++L+ + L NQL +P R F+P L L L N L
Sbjct: 122 SLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLL 181
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + + F L SL+ L L N L LP +F L L+EL L N IS + F L
Sbjct: 182 AQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLF 241
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L+L N + +P F LG L L + N+ L G F L G L
Sbjct: 242 CLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLF-----AHTPCLVGLSL 296
Query: 316 TNMMGHSMALGDYLH 330
T+ ++A G + H
Sbjct: 297 THNQLETVAEGTFAH 311
Score = 200 (75.5 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 54/153 (35%), Positives = 76/153 (49%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+SL + L+ N L +P F+ L L L N+L ++ + F L LK LNL N
Sbjct: 121 TSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNL 180
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L LP+ LF PL+ L+ L L N +S + Q F L +L+ L+LD N + +P F L
Sbjct: 181 LAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQL 240
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L L + N T L F LG L+ L L+
Sbjct: 241 FCLERLWLQRNAITHLPLSIFASLGNLTFLSLQ 273
Score = 188 (71.2 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 56/183 (30%), Positives = 94/183 (51%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ N+++ + + Q + L+ ++L+ N L +P F P L L+L++N L
Sbjct: 146 ALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNAL 205
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S + F L SL+ L L N + +LP ++F+ L LE L L +N I+ + + F L
Sbjct: 206 SGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLG 265
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N LR +P F + L L + N T+A+G F L L +L L +
Sbjct: 266 NLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAI 325
Query: 316 TNM 318
T++
Sbjct: 326 THL 328
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/190 (30%), Positives = 84/190 (44%)
Query: 131 PITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHVDLSHNQLVNIPIRGFEPQEKLVEL 188
P+T S+Q L L N + + + F SLQ + L N + +P + F L L
Sbjct: 191 PLT---SLQTLKLSNNALSGLPQGV-FGKLGSLQELFLDSNNISELPPQVFSQLFCLERL 246
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
L N ++ + F L +L L+L+ N L LP LFA L L L N++ + +
Sbjct: 247 WLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAE 306
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
F L+ LR L L N + +P F L L +L +G N T L F L +L L
Sbjct: 307 GTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELL 366
Query: 309 DLRGAGLTNM 318
L LT +
Sbjct: 367 SLSKNQLTTL 376
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 49/140 (35%), Positives = 72/140 (51%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++RL L+ N I + +I F S +L + L N L +P F LV L L HN+L
Sbjct: 243 LERLWLQRNAITHLPLSI-FASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQL 301
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+V TF L +L+ L L N + LP +F L L +L LG N ++ + A F+ L+
Sbjct: 302 ETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLS 361
Query: 256 ALRILYLDDNQLRSVPTPSF 275
L +L L NQL ++P F
Sbjct: 362 KLELLSLSKNQLTTLPEGIF 381
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 38/119 (31%), Positives = 64/119 (53%)
Query: 127 LDVIPITL---NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQ 182
L V+P L P + L L +N+++TV + S+L+ + LS+N + ++P F
Sbjct: 277 LRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDL 336
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
E+LV+L L N L++++ F L L++L+L N L LP+ +F +L L L N
Sbjct: 337 EELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGN 395
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 205 (77.2 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVD 165
CP C C+ + V C L IP ++ + + L L+ N + + + L +
Sbjct: 27 CPSQCHCHGDLQHVICDNVGLKKIP-RISEATRLLNLQRNNLGNLPTGGFSEMKGLISLH 85
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L H Q+ + + F+ KL+ L L+ N++S++ F L L L L GN + LP
Sbjct: 86 LQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTYLYLDGNQITSLPKG 145
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F+P+ +L L L N++ + F+G LR LY+ N+L S+ S + LA L
Sbjct: 146 IFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVENLAILT 205
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM-ALGDYL 329
+ N +T A + L + L+L L+ + H+ + G Y+
Sbjct: 206 LDQNNLSTYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSFGRYM 250
Score = 170 (64.9 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 57/188 (30%), Positives = 85/188 (45%)
Query: 134 LNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
LN I L L N I T+ A + + L ++ L NQ+ ++P F P L LQLN+
Sbjct: 102 LNKLIY-LYLSDNEISTIKPGAFEDLTELTYLYLDGNQITSLPKGIFSPMINLFILQLNN 160
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
NKL + TF G K L+ L + GN L + + +L L L QN +S
Sbjct: 161 NKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMS 220
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT--LADGAFNGLGRLSALDL 310
L + L L N L +P +F G E ++ LN + ++ AF G+ L +L L
Sbjct: 221 KLRVVEELNLSKNPLSLIPDHAFRSFGRYME-KLHLNDMSLEKFSNAAFEGVTALKSLHL 279
Query: 311 RGAGLTNM 318
L ++
Sbjct: 280 ENNKLRSL 287
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 43/141 (30%), Positives = 72/141 (51%)
Query: 135 NPSIQRLVLKYNRIKTVD---SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLN 191
+P I +L+ N K + + L+ + +S N+L +I + E L L L+
Sbjct: 148 SPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVENLAILTLD 207
Query: 192 HNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS-HLEELDLGQNRISRIDQAC 250
N LS+ L+ ++ LNL N L +PD F ++E+L L + + A
Sbjct: 208 QNNLSTYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSFGRYMEKLHLNDMSLEKFSNAA 267
Query: 251 FEGLTALRILYLDDNQLRSVP 271
FEG+TAL+ L+L++N+LRS+P
Sbjct: 268 FEGVTALKSLHLENNKLRSLP 288
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 36/126 (28%), Positives = 59/126 (46%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
++ ++LNL+ N L +LP F+ + L L L +I + F+GL L LYL DN+
Sbjct: 55 EATRLLNLQRNNLGNLPTGGFSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNE 114
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG 326
+ ++ +F L L L + N T+L G F+ + L L L L + +
Sbjct: 115 ISTIKPGAFEDLTELTYLYLDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGA 174
Query: 327 DYLHWI 332
L W+
Sbjct: 175 KDLRWL 180
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 212 (79.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 58/160 (36%), Positives = 78/160 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ VD S L +P G + LQL N LS ++ K GLK LKVL L+ N L+
Sbjct: 39 RRVDCSGKGLTAVP-EGLSAFTQA--LQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKT 95
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P LS L+ L L N I+ + + FEGL LR L+LDDN L VP L L
Sbjct: 96 VPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTL 155
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
L + LN +++ D AF L L L L + ++ H
Sbjct: 156 QALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQH 195
Score = 208 (78.3 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 64/183 (34%), Positives = 92/183 (50%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N++KTV S AI+ S+LQ + L N + ++P FE +L L L+ N L+ V
Sbjct: 86 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVP 145
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
L +L+ L L N + +PD F LS L L L N+I + Q CF+GL L
Sbjct: 146 VHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLET 205
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L L+ N L P + L L EL N + + DGAF+G L + L L+ +
Sbjct: 206 LDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS-FV 263
Query: 320 GHS 322
G+S
Sbjct: 264 GNS 266
Score = 197 (74.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 60/204 (29%), Positives = 96/204 (47%)
Query: 116 ETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQL 171
E V+T + L +P I ++Q L L N I +V + + + L+H+ L N L
Sbjct: 82 ELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL 141
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+P+ L L L NK+SS+ + F L SL VL+L N + L F L
Sbjct: 142 TEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLD 201
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
+LE LDL N + QA + L +L+ L N + +P +F +L + + N
Sbjct: 202 NLETLDLNYNNLGEFPQA-IKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPL 260
Query: 292 TTLADGAFNGLGRLSALDLRGAGL 315
+ + + AF+ L L +L +RGA +
Sbjct: 261 SFVGNSAFHNLSDLHSLVIRGASM 284
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 56/188 (29%), Positives = 87/188 (46%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
A C C C+ + V C L +P L+ Q L L N + + A+ L
Sbjct: 25 APPLCAAPCSCDGDRRV-DCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALSGLKEL 83
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ + L +NQL +P L L+L+ N ++SV +F GL L+ L L N L +
Sbjct: 84 KVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTE 143
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P + L L+ L L N+IS I F L++L +L+L +N++RS+ F L L
Sbjct: 144 VPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNL 203
Query: 282 AELRVGLN 289
L + N
Sbjct: 204 ETLDLNYN 211
Score = 167 (63.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 53/172 (30%), Positives = 80/172 (46%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
NP ++ + L N + V +SA S L + + +V L L L
Sbjct: 247 NPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQ-QFPNLTGTVHLESLTLTGT 305
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
K+SS+ N K L+ L+L N + DLP F LEE+ L +N+I +I + F+G
Sbjct: 306 KISSIPNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQG 363
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
L +LRIL L N + + + +F LG + L V N T+ NGL +L
Sbjct: 364 LISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQL 415
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/175 (30%), Positives = 77/175 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ SL+ + N + IP F+ L + L N LS
Sbjct: 202 NLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 261
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V N F L L L +RG + ++ P+ HLE L L +IS I +
Sbjct: 262 FVGNSAFHNLSDLHSLVIRGASMVQQFPN--LTGTVHLESLTLTGTKISSIPNNLCQEQK 319
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L N +R +P SF L E+ + N + +G F GL L LDL
Sbjct: 320 MLRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDL 372
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/149 (29%), Positives = 71/149 (47%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q + L+ N L I + ++L L L +N+L +V ++ GL +L+ L L N +
Sbjct: 60 QALQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITS 119
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P+ F L L L L N ++ + L L+ L L N++ S+P +F L L
Sbjct: 120 VPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSL 179
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N +L+ F+GL L LDL
Sbjct: 180 VVLHLHNNKIRSLSQHCFDGLDNLETLDL 208
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/124 (27%), Positives = 64/124 (51%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L +I ++ + + Q L+ +DLS+N + ++P F L E+ L N++
Sbjct: 297 LESLTLTGTKISSIPNNLCQEQKMLRTLDLSYNNIRDLP--SFNGCHALEEISLQRNQIY 354
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ TF GL SL++L+L N + ++ R FA L + LD+ N ++ GL
Sbjct: 355 QIKEGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVSFNELTSFPTEGLNGLNQ 414
Query: 257 LRIL 260
L+++
Sbjct: 415 LKLV 418
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 35/109 (32%), Positives = 55/109 (50%)
Query: 216 GNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
G L +P+ L A + L L N +S I GL L++L L +NQL++VP+ +
Sbjct: 45 GKGLTAVPEGLSA---FTQALQLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAI 101
Query: 276 IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L L LR+ N T++ + +F GL +L L L LT + H ++
Sbjct: 102 RGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLS 150
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 214 (80.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 53/189 (28%), Positives = 92/189 (48%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQH 163
S CPP C C T V C +P + + +RL L N + + ++ L+H
Sbjct: 28 SGACPPHCSCTGST--VDCHGLAFKSVPRNIPKTTERLDLNANNLTHIGK--DDFAGLKH 83
Query: 164 VDLSH---NQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
+ + H NQ+V+I F ++L L+LN N+L + F+ +L L+L N ++
Sbjct: 84 LRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNIQ 143
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
+P R F + ++ L L +N IS I+ F + L +L L++N + ++P SF ++
Sbjct: 144 MIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNNNNISAIPISSFNHMPK 203
Query: 281 LAELRVGLN 289
L R+ N
Sbjct: 204 LRTFRLHWN 212
Score = 204 (76.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 52/164 (31%), Positives = 81/164 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
AS CPP C C + +V C+ L IP + S+ + L+ N IK+V A Y L
Sbjct: 274 ASGSCPPMCSCTNN--IVDCRGKGLTAIPANMPESMTEIRLEQNGIKSVPPGAFSSYKRL 331
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F L L L NK++ + F GL +L++L L N +
Sbjct: 332 RRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKITDLPRGVFDGLSALELLLLNANKIHC 391
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ +F L +L L L N+I + + F L +++ L+L N
Sbjct: 392 VRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLKSIQTLHLAQN 435
Score = 180 (68.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 51/158 (32%), Positives = 75/158 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CPP C C E VV C L P L S L L N + +++ F + L+ +
Sbjct: 510 CPPKCRC--EATVVDCSNLRLTKFPEHLPLSTTELRLNNNDLSILEATGLFRPLTHLKKI 567
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE +VEL L N L SV F G+ L++L LR N + + +
Sbjct: 568 NLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHN 627
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F+ L ++ L L N++S I F+ L L L L
Sbjct: 628 SSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNL 665
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP C C D VV C +L +P + ++ L L N ++ + + LQ +DL
Sbjct: 733 CPEQCTCVDS--VVRCSNKHLSALPRGVPLNVTELYLDGNVFVSIPQELSAFRQLQLLDL 790
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL SL++L+L GN + +L ++
Sbjct: 791 SNNKISSLTNTSFTNMSQLTTLILSYNALRCIPPLVFGGLSSLRLLSLHGNNISELHQQI 850
Query: 227 FAPLSHLEELDLGQN 241
F + L L +G N
Sbjct: 851 FRDAASLSHLAIGAN 865
Score = 165 (63.1 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 45/149 (30%), Positives = 71/149 (47%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL+ N L +I F + L L L N++ S++ F LK L L L N L+
Sbjct: 61 ERLDLNANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQ 120
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N I I + F G T ++ L LD N + + +F + +L
Sbjct: 121 LPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVL 180
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + + +FN + +L L
Sbjct: 181 EVLTLNNNNISAIPISSFNHMPKLRTFRL 209
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/132 (31%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
S+ + L N + ++P F ++L + L++N++S + F GL+SL L L GN +
Sbjct: 306 SMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKI 365
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F LS LE L L N+I + F+ L L +L L DN+++++ +F L
Sbjct: 366 TDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLK 425
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 426 SIQTLHLAQNPF 437
Score = 159 (61.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L LN N L+ + F GLK L++L+L N + + F+ L L+ L L +NR+ ++
Sbjct: 63 LDLNANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLP 122
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F AL L L +N ++ +P +F + L++ N + + DGAF + L
Sbjct: 123 ELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEV 182
Query: 308 LDLRGAGLT----NMMGHSMALGDY-LHW 331
L L ++ + H L + LHW
Sbjct: 183 LTLNNNNISAIPISSFNHMPKLRTFRLHW 211
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 50/148 (33%), Positives = 72/148 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L P P EL+LN+N LS + F L LK +NL N + ++
Sbjct: 521 VDCSNLRLTKFPEH--LPLST-TELRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEI 577
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F S + EL L N + + F G+ LR+L L +N +R V SF L +
Sbjct: 578 EDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVR 637
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N +T+ GAF+ L LS L+L
Sbjct: 638 LLSLYDNQLSTIMPGAFDSLPNLSTLNL 665
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 40/134 (29%), Positives = 67/134 (50%)
Query: 160 SLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S + L++N L + G F P L ++ L++NK++ + + F G S+ L+L N
Sbjct: 538 STTELRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTANL 597
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L + +F + L L L N I + + F GL +R+L L DNQL ++ +F L
Sbjct: 598 LVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSL 657
Query: 279 GMLAELRVGLNVFT 292
L+ L + N F+
Sbjct: 658 PNLSTLNLLANPFS 671
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 46/147 (31%), Positives = 69/147 (46%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E + E++L N + SV F K L+ ++L N + ++
Sbjct: 289 VDCRGKGLTAIPAN--MP-ESMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIA 345
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + + F+GL+AL +L L+ N++ V F L L+
Sbjct: 346 PDAFHGLRSLNSLVLYGNKITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSL 405
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N TLA G F L + L L
Sbjct: 406 LSLYDNKIQTLAKGTFAPLKSIQTLHL 432
Score = 129 (50.5 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 51/178 (28%), Positives = 73/178 (41%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I ++D A L + L+ N+L +P F L L L+ N + +
Sbjct: 87 LHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNIQMIP 146
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ F G +K L L N + + D F + LE L L N IS I + F + LR
Sbjct: 147 RRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNNNNISAIPISSFNHMPKLRT 206
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA-FNGLG--RLSALDLRGAG 314
L N LR S +L R L ++T + A +GL L D AG
Sbjct: 207 FRLHWNSLRCDCQLS--WLSQWLRQRPALGLYTQCSSPAHLHGLNLAELQKKDFTCAG 262
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 206 (77.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 55/188 (29%), Positives = 92/188 (48%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
ASA CP C C T V C L IP + + +RL L N I + + L
Sbjct: 31 ASA-CPALCTCTGTT--VDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQL 87
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ + L NQ+ + F+ ++L L+LN N+L + F ++L L+L N ++
Sbjct: 88 RVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQA 147
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P + F + L+ L L +N+IS I++ F L L +L L++N + ++P SF ++ L
Sbjct: 148 IPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKL 207
Query: 282 AELRVGLN 289
R+ N
Sbjct: 208 RTFRLHSN 215
Score = 192 (72.6 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C++ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 278 SSGSCPAMCTCSNG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKL 335
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F+ L L L NK++ + F GL +L++L L N +
Sbjct: 336 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ F L +L L L N+I + + F L A++ L+L N
Sbjct: 396 IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L +P + ++ L L N+ V + + LQ VDL
Sbjct: 734 CPQECACLDT--VVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + L + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGI 851
Query: 227 FAPLSHLEELDLGQN 241
FA ++ L L +G N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 175 (66.7 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 48/149 (32%), Positives = 72/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ ++L+ N + I F ++L LQL N++ +V F +K L+ L L N L
Sbjct: 64 ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHM 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N I I + F G T L+ L LD NQ+ + +F L L
Sbjct: 124 LPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N TT+ +FN + +L L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 174 (66.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E VV C L IP + S L L N I +++ F + L+ +
Sbjct: 513 CPHKCRC--EANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKI 570
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE + EL L N+L S+ + F GL L+ L LR N + + +
Sbjct: 571 NLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F L ++ L L N+I+ + F+ L +L L L
Sbjct: 631 DSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNL 668
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 51/148 (34%), Positives = 76/148 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
V+ S +L IP R PQ EL+LN+N++S + F L LK +NL N + ++
Sbjct: 524 VECSSLKLTKIPER--IPQST-AELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEI 580
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F + + EL L N++ I F GL LR L L +N++ + SF L +
Sbjct: 581 EDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVR 640
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N TT++ GAF+ L LS L+L
Sbjct: 641 LLSLYDNQITTVSPGAFDTLQSLSTLNL 668
Score = 167 (63.8 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + +IP F P KL + L++N+++ + F GL+SL L L GN +
Sbjct: 310 TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKI 369
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I+ I F+ L L +L L DN+++S+ +F L
Sbjct: 370 TDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 429
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 430 AIQTLHLAQNPF 441
Score = 158 (60.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L+LN N ++ ++ F GLK L+VL L N + + F + LE L L +N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ AL L L +N ++++P +F L L++ N + + +GAF L L
Sbjct: 126 ELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEV 185
Query: 308 LDLRGAGLTNM 318
L L +T +
Sbjct: 186 LTLNNNNITTI 196
Score = 157 (60.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 124 EANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQ 182
E N DV+ + V++ + +K + S + L++N++ + G F+
Sbjct: 506 ECNSDVV-CPHKCRCEANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKL 564
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
L ++ L++NK+S + + F G S+ L+L N LE + +F L L L L NR
Sbjct: 565 THLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNR 624
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
IS I F GL +R+L L DNQ+ +V +F L L+ L + N F
Sbjct: 625 ISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPF 673
Score = 133 (51.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I V+ A L+ + L+ NQL +P F+ + L L L+ N + ++
Sbjct: 90 LQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIP 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G LK L L N + + + F L LE L L N I+ I + F + LR
Sbjct: 150 RKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT 209
Query: 260 LYLDDNQL 267
L N L
Sbjct: 210 FRLHSNHL 217
Score = 123 (48.4 bits), Expect = 0.00041, P = 0.00041
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
E + E++L N + S+ F + L+ ++L N + ++ F L L L L N+
Sbjct: 309 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 368
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + + F GL L++L L+ N++ + +F L L+ L + N +LA G F L
Sbjct: 369 ITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Query: 303 GRLSALDL 310
+ L L
Sbjct: 429 RAIQTLHL 436
Score = 121 (47.7 bits), Expect = 0.00067, P = 0.00067
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 207 KSLKVLNLRGNFLEDLPDR-LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+S L L N + L +F L+HL++++L N++S I+ FEG ++ L+L N
Sbjct: 540 QSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTAN 599
Query: 266 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
QL S+ + F L L L + N + + + +F GL + L L +T +
Sbjct: 600 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTV 652
Score = 69 (29.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L+++ L +N++ S+ SF + L L + N + AF GL L L L G ++
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 845
Query: 317 NM 318
+
Sbjct: 846 TL 847
Score = 68 (29.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 312 GAGLTNM 318
G +T++
Sbjct: 366 GNKITDL 372
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 211 (79.3 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 56/185 (30%), Positives = 93/185 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C T V C A L IP + S +RL L N I + + L+ +
Sbjct: 34 CPALCTCTGAT--VDCHGAGLQAIPKNIPRSTERLELNGNNITRIHKNDFVGLKQLRVLQ 91
Query: 166 LSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L NQ + + RG F+ ++L L+LN N+L ++ F ++L L+L N ++ +P
Sbjct: 92 LMENQ-IGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTIQAIPR 150
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
+ F + L+ L L +N+IS I++ F L L +L L++N + ++P SF ++ L
Sbjct: 151 KAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTF 210
Query: 285 RVGLN 289
R+ N
Sbjct: 211 RLHSN 215
Score = 192 (72.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C++ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 278 SSGSCPAMCSCSNG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKL 335
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F+ L L L NK++ + F GL +L++L L N +
Sbjct: 336 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ F L +L L L N+I + + F L A++ L+L N
Sbjct: 396 VRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 188 (71.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L V+P + ++ L L N+ V + + LQ VDL
Sbjct: 734 CPQECACLDT--VVRCSNKHLHVLPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + L + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLREGI 851
Query: 227 FAPLSHLEELDLGQN 241
F ++ L L +G N
Sbjct: 852 FTDVTSLSHLAIGAN 866
Score = 176 (67.0 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 49/151 (32%), Positives = 72/151 (47%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
S + ++L+ N + I F ++L LQL N++ V F +K L+ L L N L
Sbjct: 62 STERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQL 121
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
LP+ LF L LDL +N I I + F G T L+ L LD NQ+ + +F L
Sbjct: 122 HTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALR 181
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L + N TT+ +FN + +L L
Sbjct: 182 GLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 174 (66.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 51/163 (31%), Positives = 75/163 (46%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQ 162
+ A CP C C E + C L IP + S L L N I ++ A + L
Sbjct: 509 SDAVCPHKCRC--EASLAECSSLKLTKIPERIPQSTAELRLNNNEISILE-ATGIFKKLT 565
Query: 163 H---VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
H ++LS+N++ I FE + EL L N+L S+ + F GL L+ L LR N +
Sbjct: 566 HLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRI 625
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F L ++ L L N+I+ I F+ L AL L L
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNL 668
Score = 166 (63.5 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 42/132 (31%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + +IP F P KL + L++N+++ + F GL+SL L L GN +
Sbjct: 310 TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKI 369
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I+ + F+ L L +L L DN+++S+ +F L
Sbjct: 370 TDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 429
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 430 AIQTLHLAQNPF 441
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 55/166 (33%), Positives = 81/166 (48%)
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDLP 223
+ S +L IP R PQ EL+LN+N++S + F L LK +NL N + ++
Sbjct: 525 ECSSLKLTKIPER--IPQST-AELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIE 581
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
D F + + EL L N++ I F GL LR L L +N++ + SF L +
Sbjct: 582 DGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRL 641
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N T++ GAF+ L LS L+L A N LGD+L
Sbjct: 642 LSLYDNQIATISPGAFDTLQALSTLNLL-ANPFNCNCQLAWLGDWL 686
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/131 (29%), Positives = 67/131 (51%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L+LN N ++ ++ F+GLK L+VL L N + + F + LE L L +N++ +
Sbjct: 66 LELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ AL L L +N ++++P +F L L++ N + + +GAF L L
Sbjct: 126 ELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEV 185
Query: 308 LDLRGAGLTNM 318
L L +T +
Sbjct: 186 LTLNNNNITTI 196
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 160 SLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S + L++N++ + G F+ L ++ L++NK+S + + F G S+ L+L N
Sbjct: 541 STAELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQ 600
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
LE + +F L L L L NRIS I F GL +R+L L DNQ+ ++ +F L
Sbjct: 601 LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTL 660
Query: 279 GMLAELRVGLNVF 291
L+ L + N F
Sbjct: 661 QALSTLNLLANPF 673
Score = 135 (52.6 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I V+ A L+ + L+ NQL +P F+ + L L L+ N + ++
Sbjct: 90 LQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNNQALSRLDLSENTIQAIP 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G LK L L N + + + F L LE L L N I+ I + F + LR
Sbjct: 150 RKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT 209
Query: 260 LYLDDNQL 267
L N L
Sbjct: 210 FRLHSNHL 217
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
E + E++L N + S+ F + L+ ++L N + ++ F L L L L N+
Sbjct: 309 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 368
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + + F GL L++L L+ N++ V +F L L+ L + N +LA G F L
Sbjct: 369 ITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Query: 303 GRLSALDL 310
+ L L
Sbjct: 429 RAIQTLHL 436
Score = 115 (45.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 29/105 (27%), Positives = 58/105 (55%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++++ L N++ + D A + +S+ + L+ NQL +I F + L L L +N++S
Sbjct: 567 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 626
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
++N +F GL+++++L+L N + + F L L L+L N
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 671
Score = 69 (29.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L+++ L +N++ S+ SF + L L + N + AF GL L L L G ++
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 845
Query: 317 NM 318
+
Sbjct: 846 TL 847
Score = 68 (29.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 312 GAGLTNM 318
G +T++
Sbjct: 366 GNKITDL 372
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 206 (77.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 55/188 (29%), Positives = 92/188 (48%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
ASA CP C C T V C L IP + + +RL L N I + + L
Sbjct: 31 ASA-CPALCTCTGTT--VDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQL 87
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ + L NQ+ + F+ ++L L+LN N+L + F ++L L+L N ++
Sbjct: 88 RVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQA 147
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+P + F + L+ L L +N+IS I++ F L L +L L++N + ++P SF ++ L
Sbjct: 148 IPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKL 207
Query: 282 AELRVGLN 289
R+ N
Sbjct: 208 RTFRLHSN 215
Score = 192 (72.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C++ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 278 SSGSCPAMCTCSNG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKL 335
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F+ L L L NK++ + F GL +L++L L N +
Sbjct: 336 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ F L +L L L N+I + + F L A++ L+L N
Sbjct: 396 IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 188 (71.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L +P + ++ L L N+ V + + LQ VDL
Sbjct: 734 CPQECACLDT--VVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + L + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGI 851
Query: 227 FAPLSHLEELDLGQN 241
FA ++ L L +G N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 175 (66.7 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 48/149 (32%), Positives = 72/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ ++L+ N + I F ++L LQL N++ +V F +K L+ L L N L
Sbjct: 64 ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHM 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N I I + F G T L+ L LD NQ+ + +F L L
Sbjct: 124 LPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N TT+ +FN + +L L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 174 (66.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E VV C L IP + S L L N I +++ F + L+ +
Sbjct: 513 CPHKCRC--EANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKI 570
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE + EL L N+L S+ + F GL L+ L LR N + + +
Sbjct: 571 NLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F L ++ L L N+I+ + F+ L +L L L
Sbjct: 631 DSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNL 668
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 51/148 (34%), Positives = 76/148 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
V+ S +L IP R PQ EL+LN+N++S + F L LK +NL N + ++
Sbjct: 524 VECSSLKLTKIPER--IPQST-AELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEI 580
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F + + EL L N++ I F GL LR L L +N++ + SF L +
Sbjct: 581 EDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVR 640
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N TT++ GAF+ L LS L+L
Sbjct: 641 LLSLYDNQITTVSPGAFDTLQSLSTLNL 668
Score = 167 (63.8 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + +IP F P KL + L++N+++ + F GL+SL L L GN +
Sbjct: 310 TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKI 369
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I+ I F+ L L +L L DN+++S+ +F L
Sbjct: 370 TDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 429
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 430 AIQTLHLAQNPF 441
Score = 158 (60.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L+LN N ++ ++ F GLK L+VL L N + + F + LE L L +N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ AL L L +N ++++P +F L L++ N + + +GAF L L
Sbjct: 126 ELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEV 185
Query: 308 LDLRGAGLTNM 318
L L +T +
Sbjct: 186 LTLNNNNITTI 196
Score = 157 (60.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 124 EANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQ 182
E N DV+ + V++ + +K + S + L++N++ + G F+
Sbjct: 506 ECNSDVV-CPHKCRCEANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKL 564
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
L ++ L++NK+S + + F G S+ L+L N LE + +F L L L L NR
Sbjct: 565 THLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNR 624
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
IS I F GL +R+L L DNQ+ +V +F L L+ L + N F
Sbjct: 625 ISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPF 673
Score = 133 (51.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I V+ A L+ + L+ NQL +P F+ + L L L+ N + ++
Sbjct: 90 LQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIP 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G LK L L N + + + F L LE L L N I+ I + F + LR
Sbjct: 150 RKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT 209
Query: 260 LYLDDNQL 267
L N L
Sbjct: 210 FRLHSNHL 217
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
E + E++L N + S+ F + L+ ++L N + ++ F L L L L N+
Sbjct: 309 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 368
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + + F GL L++L L+ N++ + +F L L+ L + N +LA G F L
Sbjct: 369 ITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Query: 303 GRLSALDL 310
+ L L
Sbjct: 429 RAIQTLHL 436
Score = 121 (47.7 bits), Expect = 0.00071, P = 0.00071
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 207 KSLKVLNLRGNFLEDLPDR-LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+S L L N + L +F L+HL++++L N++S I+ FEG ++ L+L N
Sbjct: 540 QSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTAN 599
Query: 266 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
QL S+ + F L L L + N + + + +F GL + L L +T +
Sbjct: 600 QLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTV 652
Score = 69 (29.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L+++ L +N++ S+ SF + L L + N + AF GL L L L G ++
Sbjct: 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 845
Query: 317 NM 318
+
Sbjct: 846 TL 847
Score = 68 (29.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 312 GAGLTNM 318
G +T++
Sbjct: 366 GNKITDL 372
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 207 (77.9 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 58/185 (31%), Positives = 93/185 (50%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L+ N+++T+ + Q L+ ++L+ N L +P F+ L L+L++N L+
Sbjct: 147 LESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLA 206
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ L SL+ L L GN + +L LF+ L LE L L N I + + F L
Sbjct: 207 RLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHN 266
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L L DN LR++P F + L L + N T+ +GAF L RL +L L +T
Sbjct: 267 LTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAIT 326
Query: 317 NMMGH 321
++ H
Sbjct: 327 DLPEH 331
Score = 201 (75.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 63/216 (29%), Positives = 97/216 (44%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CP CDC V C + L IP + P I +V TV + A +L V
Sbjct: 22 CPVGCDCFGRE--VFCSDEQLADIPPDIPPHITDIVFVETAFTTVRTRAFSGSPNLTKVV 79
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
+ Q+ ++ F +L +L++ + +S+++ F L SL+ L L + L LP+
Sbjct: 80 FLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPED 139
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
LF + LE L L N++ + F+ L LR L L N L +P +F L L L+
Sbjct: 140 LFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLK 199
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
+ N+ L +GA L L L L G +T + H
Sbjct: 200 LSNNMLARLPEGALGSLSSLQELFLDGNAITELSPH 235
Score = 185 (70.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 50/178 (28%), Positives = 92/178 (51%)
Query: 135 NPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
+P++ ++V +++ ++ A LQ ++++ + + N+ F L +L L+ +
Sbjct: 72 SPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFD 131
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+L+ + F + L+ L L+GN L LP RLF L L L+L QN ++++ + F+
Sbjct: 132 RLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQS 191
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
LT L++L L +N L +P + L L EL + N T L+ F+ L L L L+
Sbjct: 192 LTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQ 249
Score = 183 (69.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 57/184 (30%), Positives = 82/184 (44%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+Q L L N + + + A+ SSLQ + L N + + F L L L HN +
Sbjct: 195 LQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAIC 254
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ F L +L L+L+ N L LP+ LFA L L L N++ I + F L+
Sbjct: 255 HLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSR 314
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L L N + +P F L L +L + N T L F+ L RL L+L LT
Sbjct: 315 LVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLT 374
Query: 317 NMMG 320
+ G
Sbjct: 375 TLPG 378
Score = 178 (67.7 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 64/214 (29%), Positives = 96/214 (44%)
Query: 108 PPDCDCNDETLVVTCKEAN-LDVIPITLNPSIQ---RLVLKYNRIKTVDS-AIQFYSSLQ 162
P D C+ + L + N L +P L S++ L L N + + A Q + LQ
Sbjct: 137 PEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQ 196
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+ LS+N L +P L EL L+ N ++ ++ F L SL++L L+ N + L
Sbjct: 197 MLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHL 256
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
P LF+ L +L L L N + + + F L L L NQL ++P +F L L
Sbjct: 257 PVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLV 316
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L + N T L + F L +L L L LT
Sbjct: 317 SLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLT 350
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 52/184 (28%), Positives = 87/184 (47%)
Query: 136 PSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q L + + + + + I SSL+ + L ++L +P F + L LQL N+
Sbjct: 97 PRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQ 156
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ + F L+ L+ LNL N L LP F L+ L+ L L N ++R+ + L
Sbjct: 157 LRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSL 216
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
++L+ L+LD N + + F L L L + N L F+ L L+ L L+
Sbjct: 217 SSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNA 276
Query: 315 LTNM 318
L +
Sbjct: 277 LRTL 280
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 53/166 (31%), Positives = 76/166 (45%)
Query: 137 SIQRLVLKYNRIKTVDSAI--QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
S+Q L L N I + + Q +S L+ + L HN + ++P+ F L L L N
Sbjct: 218 SLQELFLDGNAITELSPHLFSQLFS-LEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNA 276
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ F + L L+L N LE +P+ F LS L L L N I+ + + F L
Sbjct: 277 LRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNL 336
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
L L LD N L ++ F L L L + N TTL G F+
Sbjct: 337 EQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLPGGIFD 382
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 209 (78.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 64/184 (34%), Positives = 95/184 (51%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++RL L+YN+I+++ + S L+ + L +N L + P KL L N N++
Sbjct: 85 LRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYANGNEIG 144
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ +F GL+SL L L GN L LPD +FAPL +L L L NRI + + F L
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGK 204
Query: 257 LRILYLDDNQLR-SVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
LR L L N+L+ S+ +F+ L L+ L + N L F L RL L L G
Sbjct: 205 LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
Query: 315 LTNM 318
LT++
Sbjct: 265 LTHL 268
Score = 190 (71.9 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 69/226 (30%), Positives = 106/226 (46%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLN-PSIQRLVLKY----NRIKTVDSAIQ 156
+A + CP CDC ++ C L +P T + PS Q VL Y N I + +A
Sbjct: 22 RAESVCPERCDCQHPQHLL-CTNRGLRAVPKTSSLPSPQD-VLTYSLGGNFITNI-TAFD 78
Query: 157 FY--SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNL 214
F+ L+ +DL +NQ+ ++ + FE +L EL L +N L ++ T L+ L++L
Sbjct: 79 FHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTLAPLRKLRILYA 138
Query: 215 RGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 274
GN + L F L L +L L N + + A F L L L+L+ N++R + +
Sbjct: 139 NGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNA 198
Query: 275 FIYLGMLAELRVGLNVFT-TLADGA-FNGLGRLSALDLRGAGLTNM 318
F LG L L + N +L A F L LS L L L ++
Sbjct: 199 FSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHL 244
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 55/157 (35%), Positives = 75/157 (47%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N + NI F +L L L +N++ S++ KTF L L+ L L N L+ L
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPG 125
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
APL L L N I R+ + FEGL +L L LD N L ++P F LG L L
Sbjct: 126 TLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLH 185
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ N L AF+ LG+L L+L L + H+
Sbjct: 186 LESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHA 222
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 60/197 (30%), Positives = 91/197 (46%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ +L L N + + D+ +L ++ L N++ + F KL L L+ N+L
Sbjct: 156 SLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANEL 215
Query: 196 S-SVNNK-TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
S+ + TF+ L+SL L L N L+ L R+F L L L L N+++ + F G
Sbjct: 216 QPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWG 275
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L ALR L L+ N+L +P L L L + N + L F GRL L LR
Sbjct: 276 LEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDN 335
Query: 314 GLTNMMGHSMALGDYLH 330
L+ + G A L+
Sbjct: 336 ALSALSGDIFAASPALY 352
Score = 162 (62.1 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 61/177 (34%), Positives = 85/177 (48%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
SL + LS N L ++ R F+ +L L L+ N+L+ + + F GL++L+ L L GN L
Sbjct: 230 SLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRL 289
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
LP L PL LE LDL N +S + A F LR L L DN L ++ F
Sbjct: 290 NQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASP 349
Query: 280 MLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTNMMG--HSMAL-GDYLHWI 332
L L + N +T D GL R + +G LT + H AL G YL ++
Sbjct: 350 ALYRLDLDGNGWT--CDCRLRGLKRWMGNWHSQGRLLTVFVQCRHPPALRGKYLDYL 404
Score = 162 (62.1 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 64/209 (30%), Positives = 97/209 (46%)
Query: 116 ETLVVTCKEAN-LDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHVDLSHNQ 170
E+LV + N L +P + + L+ L+ NRI+ + +A L+ ++LS N+
Sbjct: 155 ESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGKLRFLNLSANE 214
Query: 171 LVNIPIRG---FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLF 227
L +R F P L L L+ N L + + F L L +L+L GN L L F
Sbjct: 215 L-QPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAF 273
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
L L EL L NR++++ E L +L L L N+L ++ +F + G L EL +
Sbjct: 274 WGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLR 333
Query: 288 LNVFTTLADGAFNGLGRLSALDLRGAGLT 316
N + L+ F L LDL G G T
Sbjct: 334 DNALSALSGDIFAASPALYRLDLDGNGWT 362
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 208 (78.3 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 64/184 (34%), Positives = 95/184 (51%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++RL L+YN+I+++ + S L+ + L +N L + P KL L N N++
Sbjct: 85 LRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEIG 144
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ +F GL+SL L L GN L LPD +FAPL +L L L NRI + + F L
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGK 204
Query: 257 LRILYLDDNQLR-SVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
LR L L N+L+ S+ +F+ L L+ L + N L F L RL L L G
Sbjct: 205 LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
Query: 315 LTNM 318
LT++
Sbjct: 265 LTHL 268
Score = 190 (71.9 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 69/226 (30%), Positives = 106/226 (46%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLN-PSIQRLVLKY----NRIKTVDSAIQ 156
+A + CP CDC ++ C L +P T + PS Q VL Y N I + +A
Sbjct: 22 RAESVCPERCDCQHPQHLL-CTNRGLRAVPKTSSLPSPQD-VLTYSLGGNFITNI-TAFD 78
Query: 157 FY--SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNL 214
F+ L+ +DL +NQ+ ++ + FE +L EL L +N L ++ T L+ L++L
Sbjct: 79 FHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYA 138
Query: 215 RGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 274
GN + L F L L +L L N + + A F L L L+L+ N++R + +
Sbjct: 139 NGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNA 198
Query: 275 FIYLGMLAELRVGLNVFT-TLADGA-FNGLGRLSALDLRGAGLTNM 318
F LG L L + N +L A F L LS L L L ++
Sbjct: 199 FTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHL 244
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 55/157 (35%), Positives = 74/157 (47%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N + NI F +L L L +N++ S++ KTF L L+ L L N L+ L
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPG 125
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
APL L L N I R+ + FEGL +L L LD N L ++P F LG L L
Sbjct: 126 TLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLH 185
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ N L AF LG+L L+L L + H+
Sbjct: 186 LEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHA 222
Score = 167 (63.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 60/197 (30%), Positives = 91/197 (46%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ +L L N + + D+ +L ++ L N++ + F KL L L+ N+L
Sbjct: 156 SLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANEL 215
Query: 196 S-SVNNK-TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
S+ + TF+ L+SL L L N L+ L R+F L L L L N+++ + F G
Sbjct: 216 QPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWG 275
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L ALR L L+ N+L +P L L L + N + L F GRL L LR
Sbjct: 276 LEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDN 335
Query: 314 GLTNMMGHSMALGDYLH 330
L+ + G A L+
Sbjct: 336 ALSALSGDIFAASPALY 352
Score = 162 (62.1 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 61/177 (34%), Positives = 85/177 (48%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
SL + LS N L ++ R F+ +L L L+ N+L+ + + F GL++L+ L L GN L
Sbjct: 230 SLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRL 289
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
LP L PL LE LDL N +S + A F LR L L DN L ++ F
Sbjct: 290 NQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASP 349
Query: 280 MLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTNMMG--HSMAL-GDYLHWI 332
L L + N +T D GL R + +G LT + H AL G YL ++
Sbjct: 350 ALYRLDLDGNGWT--CDCRLRGLKRWMGNWHSQGRLLTVFVQCRHPPALRGKYLDYL 404
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 64/209 (30%), Positives = 97/209 (46%)
Query: 116 ETLVVTCKEAN-LDVIPITLNPSIQRLV---LKYNRIKTVD-SAIQFYSSLQHVDLSHNQ 170
E+LV + N L +P + + L+ L+ NRI+ + +A L+ ++LS N+
Sbjct: 155 ESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGKLRFLNLSANE 214
Query: 171 LVNIPIRG---FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLF 227
L +R F P L L L+ N L + + F L L +L+L GN L L F
Sbjct: 215 L-QPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQLTHLAPEAF 273
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
L L EL L NR++++ E L +L L L N+L ++ +F + G L EL +
Sbjct: 274 WGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALHPATFGHQGRLRELSLR 333
Query: 288 LNVFTTLADGAFNGLGRLSALDLRGAGLT 316
N + L+ F L LDL G G T
Sbjct: 334 DNALSALSGDIFAASPALYRLDLDGNGWT 362
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 198 (74.8 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 69/222 (31%), Positives = 98/222 (44%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQH 163
S CP C C V+C+ N +P L P +RL L+ N I+ + + F S
Sbjct: 23 SPACPALCTCYVSPPTVSCQANNFSSVPTGLPPGARRLFLQNNVIRALRAGT-FGPSTVT 81
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+ L N + +I F L EL L N L + TF GL+ L+ L+L L L
Sbjct: 82 LWLYSNNISSIQPGTFRHLPALEELDLGDNPHLRVLAPDTFHGLRRLQALHLYRCQLASL 141
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
P +F L L+ L L +N + + F L L L+L N+LR++ F L L
Sbjct: 142 PSAIFRGLHSLQYLYLQENGLLYLQDDLFADLANLSHLFLHGNRLRALSEGVFRGLPSLD 201
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L + N T+ AF GL RL+ L L L + G +A
Sbjct: 202 RLLLHANRLATVHRRAFRGLARLTILYLFNNSLAALPGDPLA 243
Score = 152 (58.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 56/180 (31%), Positives = 81/180 (45%)
Query: 133 TLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQL 190
T PS L L N I ++ + +L+ +DL N + + F +L L L
Sbjct: 74 TFGPSTVTLWLYSNNISSIQPGTFRHLPALEELDLGDNPHLRVLAPDTFHGLRRLQALHL 133
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQAC 250
+L+S+ + F GL SL+ L L+ N L L D LFA L++L L L NR+ + +
Sbjct: 134 YRCQLASLPSAIFRGLHSLQYLYLQENGLLYLQDDLFADLANLSHLFLHGNRLRALSEGV 193
Query: 251 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
F GL +L L L N+L +V +F L L L + N L L L L L
Sbjct: 194 FRGLPSLDRLLLHANRLATVHRRAFRGLARLTILYLFNNSLAALPGDPLAALPALQFLRL 253
Score = 151 (58.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 50/156 (32%), Positives = 72/156 (46%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
P+++ L L N V + F+ LQ + L QL ++P F L L L N
Sbjct: 101 PALEELDLGDNPHLRVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRGLHSLQYLYLQEN 160
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
L + + F L +L L L GN L L + +F L L+ L L NR++ + + F G
Sbjct: 161 GLLYLQDDLFADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATVHRRAFRG 220
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
L L ILYL +N L ++P L L LR+ N
Sbjct: 221 LARLTILYLFNNSLAALPGDPLAALPALQFLRLNAN 256
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 201 (75.8 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 63/234 (26%), Positives = 107/234 (45%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSL 161
A A CP +C C+ + V C + L IP ++ + L L+ N + + + + +L
Sbjct: 19 ALAACPQNCHCHSDLQHVICDKVGLQKIP-KVSEKTKLLNLQRNNFPVLAANSFRAMPNL 77
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ L H Q+ + F ++L+ L L+HN + + F L L L L N + +
Sbjct: 78 VSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTE 137
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP L +PL +L L L N+I + F+G LR LYL +N L S+ + + L
Sbjct: 138 LPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENL 197
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM-ALGDYLH--WI 332
A+ V N ++ A + L + L L L ++ ++ + G YL W+
Sbjct: 198 AKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWL 251
Score = 168 (64.2 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P++ L L++ +I+ V + A + L ++ LSHN + + F+ +L L L+HNK
Sbjct: 75 PNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNK 134
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++ + L +L +L L N + +L F L L L +N +S + + +
Sbjct: 135 VTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDV 194
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGA 313
L ++D NQL S P+ + L ++ EL++ N ++ D AF GR L L L
Sbjct: 195 ENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNT 254
Query: 314 GL 315
L
Sbjct: 255 NL 256
Score = 141 (54.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 134 LNPSIQRLVLKYNRIKTVD---SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
L+P + +L+ N K + A Q L+ + LS N L ++ + E L + +
Sbjct: 143 LSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHV 202
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS-HLEELDLGQNRISRIDQA 249
+ N+LSS + L+ ++ L L N L+ +PD F +LE L L + +
Sbjct: 203 DRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDG 262
Query: 250 CFEGLTALRILYLDDNQLRSVPT 272
F G+T L+ ++L++N+L +P+
Sbjct: 263 AFLGVTTLKHVHLENNRLNQLPS 285
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 204 (76.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 70/207 (33%), Positives = 95/207 (45%)
Query: 107 CPPDCDCNDETLVVT-CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHV 164
CP C C +E V T C + L +P + S QR+ L NRI V +A Q +L +
Sbjct: 27 CPGACVCYNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNRISYVPAASFQSCRNLTIL 86
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHN-KLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L N L I F L +L L+ N +L V+ TF GL L L+L L++L
Sbjct: 87 WLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELG 146
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L+ L+ L L N + + F L L L+L N++ SVP +F L L
Sbjct: 147 PGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDR 206
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + AF LGRL L L
Sbjct: 207 LLLHQNHVARVHPHAFRDLGRLMTLYL 233
Score = 179 (68.1 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 51/165 (30%), Positives = 79/165 (47%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+S Q + L N++ +P F+ L L L+ N L+ ++ F GL L+ L+L N
Sbjct: 57 ASSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNA 116
Query: 219 -LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 277
L + F L HL L L + + + F GL AL+ LYL DN L+++P +F
Sbjct: 117 QLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRD 176
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
LG L L + N ++ + AF GL L L L + + H+
Sbjct: 177 LGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHA 221
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/156 (32%), Positives = 72/156 (46%)
Query: 141 LVLKYNRIKTVDSA-IQFYSSLQHVDLSHN-QLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
L L N + +D+A + L+ +DLS N QL + F L L L+ L +
Sbjct: 86 LWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQEL 145
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
F GL +L+ L L+ N L+ LPD F L +L L L NRI + + F GL +L
Sbjct: 146 GPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLD 205
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 294
L L N + V +F LG L L + N + L
Sbjct: 206 RLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSML 241
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/169 (28%), Positives = 73/169 (43%)
Query: 125 ANLDVIPITLNPSIQRLVLKYN-RIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG---FE 180
A +D T +++L L N +++ VD + L H+ H + G F
Sbjct: 94 AGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTT--FRGLGHLHTLHLDRCGLQELGPGLFR 151
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
L L L N L ++ + TF L +L L L GN + +P+ F L L+ L L Q
Sbjct: 152 GLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQ 211
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
N ++R+ F L L LYL N L +P + L L LR+ N
Sbjct: 212 NHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 260
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 204 (76.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 71/226 (31%), Positives = 103/226 (45%)
Query: 102 QASAFCPPDCDCNDETLVVT-CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYS 159
+ +A CP C C E V T C + L +P + + QR+ L NRI V +A +
Sbjct: 22 RVAAPCPGACVCYSEPKVTTSCPQQGLQAVPADIPAASQRVFLHGNRIAYVPAASFRACR 81
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN-KLSSVNNKTFIGLKSLKVLNLRGNF 218
+L + L N L +I F L +L L+ N +L +V+ TF GL L L+L
Sbjct: 82 NLTILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCG 141
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L +L LF L+ L+ L L N + + F L L L+L N + SVP +F L
Sbjct: 142 LRELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGL 201
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L L + N + AF LGRL L L L+ + ++A
Sbjct: 202 HSLDRLLLHQNRVARVHPHAFRDLGRLMTLYLFANNLSALSAEALA 247
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/172 (31%), Positives = 80/172 (46%)
Query: 141 LVLKYNRIKTVDSA-IQFYSSLQHVDLSHN-QLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
L L N + +D+A + L+ +DLS N QL + F +L L L+ L +
Sbjct: 86 LWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLREL 145
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
F GL +L+ L L+ N L+ LPD F+ L +L L L N I + + F GL +L
Sbjct: 146 GPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHSLD 205
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L N++ V +F LG L L + N + L+ A L L L L
Sbjct: 206 RLLLHQNRVARVHPHAFRDLGRLMTLYLFANNLSALSAEALAPLRSLQYLRL 257
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/167 (28%), Positives = 75/167 (44%)
Query: 125 ANLDVIPITLNPSIQRLVLKYN-RIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQ 182
A++D + +++L L N +++ VD A + L + L L + F
Sbjct: 94 AHIDAAAFSGLALLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLRELGPGLFRGL 153
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
L L L N L ++ + F L +L L L GN + +P+R F L L+ L L QNR
Sbjct: 154 AALQYLYLQDNGLQALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHSLDRLLLHQNR 213
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
++R+ F L L LYL N L ++ + L L LR+ N
Sbjct: 214 VARVHPHAFRDLGRLMTLYLFANNLSALSAEALAPLRSLQYLRLNDN 260
>UNIPROTKB|F1RHM5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:CT737345
Ensembl:ENSSSCT00000011101 Uniprot:F1RHM5
Length = 473
Score = 204 (76.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 71/226 (31%), Positives = 105/226 (46%)
Query: 102 QASAFCPPDCDCNDETLVVT-CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYS 159
+ +A CP C C +E V T C + L +P + + QR+ L NRI V +A +
Sbjct: 22 RVAAPCPGACVCYNEPKVTTSCPQQGLQAVPADIPAASQRVFLHGNRITYVPAASFRACR 81
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN-KLSSVNNKTFIGLKSLKVLNLRGNF 218
+L + L N L I F L +L L+ N +L +V+ TF GL L L+L
Sbjct: 82 NLTILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCG 141
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L++L LF L+ L+ L L N + + F L L L+L N++ SVP +F L
Sbjct: 142 LQELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGL 201
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L L + N + AF LGRL L L L+ + ++A
Sbjct: 202 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALSAEALA 247
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/172 (32%), Positives = 79/172 (45%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHN-QLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
L L N + +D+ A L+ +DLS N QL + F +L L L+ L +
Sbjct: 86 LWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLQEL 145
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
F GL +L+ L L+ N L+ LPD F L +L L L NRI + + F GL +L
Sbjct: 146 GPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHSLD 205
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L N++ V +F LG L L + N + L+ A L L L L
Sbjct: 206 RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALSAEALAPLRALQYLRL 257
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 45/154 (29%), Positives = 69/154 (44%)
Query: 138 IQRLVLKYN-RIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++L L N +++ VD A + L + L L + F L L L N L
Sbjct: 107 LEQLDLSDNAQLRAVDPATFRGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGL 166
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + F L +L L L GN + +P+R F L L+ L L QNR++ + F L
Sbjct: 167 QALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 226
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
L LYL N L ++ + L L LR+ N
Sbjct: 227 RLMTLYLFANNLSALSAEALAPLRALQYLRLNDN 260
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 209 (78.6 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 65/215 (30%), Positives = 104/215 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQR-LVLKYNRIKTVDSA-IQFYSSLQHV 164
C C C ++L C L +P L PS R L L YN++ +D A + +LQ V
Sbjct: 41 CAAACTCAGDSL--DCGGRGLAALPGDL-PSWTRSLNLSYNKLSEIDPAGFEDLPNLQEV 97
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L++N+L +P G +V L L HNK+ SV SL+VL+L N + ++ +
Sbjct: 98 YLNNNELTAVPSLG-AASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRN 156
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLT-ALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F ++EL+L NRI ++ F+GL+ +L L L N++ +P +F L L +
Sbjct: 157 TCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAF-KLPRLTQ 215
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L + N + F GL L L L+ ++ +
Sbjct: 216 LDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKL 250
Score = 196 (74.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/192 (30%), Positives = 93/192 (48%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L++N+I++V+ S ++ Y SL+ +DLS N + + F + EL L N++ ++
Sbjct: 120 LFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLE 179
Query: 200 NKTFIGL-KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
F GL +SL L L N + LP R F L L +LDL +NRI I+ F+GL +L
Sbjct: 180 LGAFDGLSRSLLTLRLSKNRITQLPVRAFK-LPRLTQLDLNRNRIRLIEGLTFQGLNSLE 238
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+L L N + + +F L + L + N + G+ GL L L L + +
Sbjct: 239 VLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARI 298
Query: 319 MGHSMALGDYLH 330
+ LH
Sbjct: 299 HRKGWSFCQKLH 310
Score = 180 (68.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 59/189 (31%), Positives = 96/189 (50%)
Query: 134 LNPSIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
LN S++ L L+ N I K D A S + + L +N LV + L +L L++
Sbjct: 234 LN-SLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSN 292
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N ++ ++ K + + L L L N L L + A LS L L L N IS I + F+
Sbjct: 293 NSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFK 352
Query: 253 GLTALRILYLDDNQLR-SVPTPSFIYLGM--LAELRVGLNVFTTLADGAFNGLGRLSALD 309
GL +LR+L LD N++ ++ S + G+ L++L + N ++A AF+GL L L+
Sbjct: 353 GLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLN 412
Query: 310 LRGAGLTNM 318
L G + ++
Sbjct: 413 LGGNAIRSV 421
Score = 173 (66.0 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 55/174 (31%), Positives = 87/174 (50%)
Query: 141 LVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+YN + V+S + ++L + LS+N + I +G+ +KL EL L+ N L+ ++
Sbjct: 264 LHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLD 323
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS-RIDQA--CFEGLTA 256
++ L SL VL L N + + + F L L LDL N IS I+ F GL +
Sbjct: 324 EESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDS 383
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L L N+++SV +F L L L +G N ++ AF + L L +
Sbjct: 384 LSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHI 437
Score = 173 (66.0 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 54/181 (29%), Positives = 89/181 (49%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + +L L NRI+ ++ Q +SL+ + L N + + F K+ L L +N
Sbjct: 211 PRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNS 270
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L VN+ + GL +L L+L N + + + ++ L EL L N ++R+D+ L
Sbjct: 271 LVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAEL 330
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT-TLAD--GAFNGLGRLSALDLR 311
++L +L L N + + +F L L L + N + T+ D GAF+GL LS L L
Sbjct: 331 SSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLF 390
Query: 312 G 312
G
Sbjct: 391 G 391
Score = 172 (65.6 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 134 LNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
L+ S+ L L NRI + L +DL+ N++ I F+ L L+L N
Sbjct: 186 LSRSLLTLRLSKNRITQLPVRAFKLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRN 245
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+S + + F GL + VL+L N L ++ L+ L +L L N I+RI + +
Sbjct: 246 NISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSF 305
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L L N L + S L L+ LR+ N + +A+GAF GL L LDL
Sbjct: 306 CQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDL 362
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ +L L N I + F L + LS N L + L L+L+HN +
Sbjct: 284 ALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSI 343
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLED-LPDR--LFAPLSHLEELDLGQNRISRIDQACFE 252
S + F GL+SL+VL+L N + + D F+ L L +L L N+I + + F
Sbjct: 344 SHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFS 403
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
GL L L L N +RSV +F+ + L EL + + F
Sbjct: 404 GLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSF 442
Score = 137 (53.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 48/190 (25%), Positives = 92/190 (48%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEK-LVELQLNHNK 194
S++ L L N I V ++ ++ ++L+ N++ + + F+ + L+ L+L+ N+
Sbjct: 140 SLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNR 199
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++ + + F L L L+L N + + F L+ LE L L +N IS++ F GL
Sbjct: 200 ITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGL 258
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
+ + +L+L+ N L V + S L L +L + N + ++ +L L L
Sbjct: 259 SKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNN 318
Query: 315 LTNMMGHSMA 324
LT + S+A
Sbjct: 319 LTRLDEESLA 328
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 208 (78.3 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 56/163 (34%), Positives = 80/163 (49%)
Query: 148 IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLK 207
+ + S + ++S ++DLS N + + L EL+L N L+ + F GL
Sbjct: 57 LSELPSNLSVFTS--YLDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLY 114
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
SLKVL L+ N L +P L L+ L L N IS + +CF GL +LR L+LDDN L
Sbjct: 115 SLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+P +F L L + + LN + D AF L L L L
Sbjct: 175 TEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHL 217
Score = 182 (69.1 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 54/166 (32%), Positives = 84/166 (50%)
Query: 137 SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L+L+ N+++ V + A+Q SLQ + L N + +P F L L L+ N L
Sbjct: 115 SLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNAL 174
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + + F L +L+ + L N + +PD F LS L L L NRI + + CF+GL
Sbjct: 175 TEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLH 234
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
+L L L+ N L PT + L L EL N ++ + AF G
Sbjct: 235 SLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNIRSIPEKAFVG 279
Score = 182 (69.1 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 57/178 (32%), Positives = 78/178 (43%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+Q L L N I V S SL+H+ L N L IP++ F L + L NK+
Sbjct: 139 SLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKI 198
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + F L SL VL+L N + L + F L LE LDL N + A L+
Sbjct: 199 HHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTA-IRTLS 257
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L N +RS+P +F+ L + N + AF L L L L GA
Sbjct: 258 NLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGA 315
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 47/175 (26%), Positives = 78/175 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S++ L L YN + +AI+ S+L+ + N + +IP + F L+ + N +
Sbjct: 235 SLETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQ 294
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L+ L L G + + + PD ++LE L L +IS + Q L
Sbjct: 295 FVGRSAFQHLPELRTLTLNGASQITEFPD--LTGTANLESLTLTGAQISSLPQTVCNQLP 352
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L++L L N L +P SF L ++ + N + F L L +L+L
Sbjct: 353 NLQVLDLSYNLLEDLP--SFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNL 405
Score = 136 (52.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 39/129 (30%), Positives = 66/129 (51%)
Query: 132 ITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+T +++ L L +I ++ + +LQ +DLS+N L ++P F +KL ++ L
Sbjct: 324 LTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLP--SFSVCQKLQKIDL 381
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQAC 250
HN++ + TF L SL+ LNL N + + F+ L L +LDL N +S
Sbjct: 382 RHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITG 441
Query: 251 FEGLTALRI 259
GLT L++
Sbjct: 442 LHGLTHLKL 450
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 38/102 (37%), Positives = 53/102 (51%)
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 276
N + LP+ L L LEEL L N ++ I + F GL +L++L L +NQLR VPT +
Sbjct: 77 NISQLLPNPL-PSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQ 135
Query: 277 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L LR+ N + + F+GL L L L LT +
Sbjct: 136 NLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEI 177
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/173 (29%), Positives = 81/173 (46%)
Query: 135 NPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNH 192
NPS+ + N I+ V SA Q L+ + L+ +Q+ P L L L
Sbjct: 280 NPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFP--DLTGTANLESLTLTG 337
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
++SS+ L +L+VL+L N LEDLP F+ L+++DL N I I F+
Sbjct: 338 AQISSLPQTVCNQLPNLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIKVDTFQ 395
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
L +LR L L N++ + +F L L +L + N+ ++ +GL L
Sbjct: 396 QLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITGLHGLTHL 448
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 207 (77.9 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 63/190 (33%), Positives = 92/190 (48%)
Query: 102 QASAF-CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYS 159
QA+A CP C C++ V C+ NL +P + QRL L+ N +K + +A Q
Sbjct: 27 QAAAQRCPQACICDNSRRHVACRYQNLTEVPDAIPELTQRLDLQGNLLKVIPAAAFQGVP 86
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
L H+DL H ++ + F +L+ L L N L + + GL SL+ L L GN L
Sbjct: 87 HLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNAL 146
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
E+L F L L L+L N + + F+GL +R L L N L SV P + G
Sbjct: 147 EELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNAL-SVLAPEAL-AG 204
Query: 280 MLAELRVGLN 289
+ A R+ L+
Sbjct: 205 LPALRRLSLH 214
Score = 174 (66.3 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 58/184 (31%), Positives = 78/184 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S + + +Y + V AI + Q +DL N L IP F+ L L L H ++
Sbjct: 42 SRRHVACRYQNLTEVPDAIPELT--QRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVE 99
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V F GL L +LNL N L +LP L L L+L N + + F L A
Sbjct: 100 LVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGA 159
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L L N L +P +F L + LR+ N + LA A GL L L L L
Sbjct: 160 LATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQ 219
Query: 317 NMMG 320
+ G
Sbjct: 220 ALPG 223
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 63/217 (29%), Positives = 95/217 (43%)
Query: 116 ETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVDS-AIQFYSSLQHVDLSHNQL 171
+T ++ + + +P P + LV L++ I +++ A+ L ++ LS NQL
Sbjct: 426 DTQLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQL 485
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+ E +L L L N+ V L SL L+L+ N ++ L
Sbjct: 486 AGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTR 545
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
L + L NRI+ + L L+LD NQLR VPT + L L EL++ N
Sbjct: 546 ALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPL 605
Query: 292 TTLADGAFNGLGR-LSALDLRGAGLTNMM-GHSMALG 326
L DGAF +GR L L L +GL + G LG
Sbjct: 606 RALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLG 642
Score = 162 (62.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 52/177 (29%), Positives = 88/177 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++RL L+ N ++ + +L ++L+HN LV +P F+ ++ L+L+HN L
Sbjct: 135 SLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNAL 194
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S + + GL +L+ L+L N L+ LP + + L L+LG N ++ + L
Sbjct: 195 SVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALP 254
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
LR L LD L+++ +F + L L + N TL G G+L L L+G
Sbjct: 255 GLRELLLDGGALQALGPRAFAHCPRLHTLDLRGNQLDTLPP--LQGPGQLRRLRLQG 309
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 58/196 (29%), Positives = 84/196 (42%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + L L++ ++ V + A + L ++L+ N L +P + L L+L N
Sbjct: 86 PHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNA 145
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L + TF L +L LNL N L LP F L + L L N +S + GL
Sbjct: 146 LEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGL 205
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
ALR L L N+L+++P P LA L +G N T + L L L L G
Sbjct: 206 PALRRLSLHHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGA 265
Query: 315 LTNMMGHSMALGDYLH 330
L + + A LH
Sbjct: 266 LQALGPRAFAHCPRLH 281
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 47/150 (31%), Positives = 74/150 (49%)
Query: 136 PSIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
PS+ L L+ N + + + +L+ V LS N++ + + P +L +L L+ N+
Sbjct: 521 PSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQ 580
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSH-LEELDLGQNRISRIDQACFEG 253
L V GL +L L L GN L L D F P+ L+ L L + + +I F G
Sbjct: 581 LREVPTGALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSG 640
Query: 254 L-TALRILYLDDNQLRSVPT-PSFIYLGML 281
L L+ L+L NQLR++P PS L ++
Sbjct: 641 LGPGLQSLHLQKNQLRALPALPSLSQLELI 670
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 56/213 (26%), Positives = 85/213 (39%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSS 160
+A A CP C C E+ +C+ L +P Q L L+ N +V +A
Sbjct: 391 RAVAPCPRACVCVPESRHSSCEGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAFPGLGH 450
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNL-RGNFL 219
L + L H + + +L+ L L+ N+L+ ++ G L L L R FL
Sbjct: 451 LVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFL 510
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+ +P L L L L N + R+ ALR +YL N++ V +
Sbjct: 511 Q-VPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPAR 569
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L +L + N + GA GL L L L G
Sbjct: 570 ELEKLHLDRNQLREVPTGALEGLPALLELQLSG 602
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 50/166 (30%), Positives = 74/166 (44%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+S +HV + L +P P E L L N L + F G+ L L+LR
Sbjct: 41 NSRRHVACRYQNLTEVP--DAIP-ELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCE 97
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
+E + + F L L L+L N + + Q +GL +LR L L+ N L + +F L
Sbjct: 98 VELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGAL 157
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
G LA L + N L AF GL R+ L L L+ + ++A
Sbjct: 158 GALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALA 203
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 208 (78.3 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 60/178 (33%), Positives = 91/178 (51%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHV---DLSHNQLVNIPIRGFEPQEKLVELQLNH 192
PS+QRL L ++ + + + +SSLQ++ DLSHN+ + P F P ++L L L+
Sbjct: 392 PSLQRLNLNKCQLSFISN--KTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSR 449
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N ++ +NN F GL SLK LNL ++ + F +LE LDLG N I ++ F+
Sbjct: 450 NPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQ 509
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L L L N+L + + +F L L L + N + F GL +L L L
Sbjct: 510 PLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLKL 567
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/151 (34%), Positives = 76/151 (50%)
Query: 161 LQHVDLSHNQ-LVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
L +DL N LV++ F L L LN +LS ++NKT+ L++L +L+L N
Sbjct: 369 LLFLDLGQNSDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKF 428
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+ PD F+PL LE L L +N I+ ++ F GL +L+ L L + ++ SF
Sbjct: 429 KSFPDFAFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFP 488
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L +G N TL G F L +L L L
Sbjct: 489 NLEVLDLGDNNIRTLNHGTFQPLKKLHTLIL 519
Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 64/194 (32%), Positives = 96/194 (49%)
Query: 133 TLNP--SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQ 189
T P + L+L +NR++ ++S A + L+++DL +N L F EKL+ L+
Sbjct: 507 TFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLK 566
Query: 190 LNHNKLSSVNNKT-----FIGLKSLKVLNLRG--NFLEDLPDRLFAPLSHLEELDLGQNR 242
L NK++ +T F+ LKSLK LNL G + ++ +P F LS L+EL LG+N
Sbjct: 567 LGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQVVPRNFFQGLSSLQELLLGKNP 626
Query: 243 ISRIDQACFE---GLTALRILYLDDNQLRSVPTPSFIY--LGMLAELRVGLNVFTTLADG 297
+D F+ LT L I D RS+ S ++ L L LR+ N +L G
Sbjct: 627 SVFLDHHQFDPLINLTKLDISGTKDGD-RSLYLNSSLFQNLKRLKVLRLENNNLESLVPG 685
Query: 298 AFNGLGRLSALDLR 311
F+ L L LR
Sbjct: 686 MFSSLQNLQVFSLR 699
Score = 168 (64.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 55/170 (32%), Positives = 81/170 (47%)
Query: 152 DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKV 211
DS SLQ ++L+ QL I + + + L L L+HNK S + F LK L+
Sbjct: 385 DSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDFAFSPLKRLEF 444
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L+L N + +L + F+ L L+EL+L I ID+ F L +L L DN +R++
Sbjct: 445 LSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLN 504
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
+F L L L + N + AF+GL L LDL L+ H
Sbjct: 505 HGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKH 554
Score = 154 (59.3 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 57/185 (30%), Positives = 81/185 (43%)
Query: 137 SIQRLV---LKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
S+Q L L +N+ K+ D A L+ + LS N + + F L EL L
Sbjct: 414 SLQNLTILDLSHNKFKSFPDFAFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAA 473
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
+ +++ +F +L+VL+L N + L F PL L L L NR+ ++ F
Sbjct: 474 CWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFS 533
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT-----TLADGAFNGLGRLSA 307
GLT LR L L N L F+ L L L++G N T TL F L L
Sbjct: 534 GLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQ 593
Query: 308 LDLRG 312
L+L G
Sbjct: 594 LNLEG 598
Score = 151 (58.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 59/185 (31%), Positives = 88/185 (47%)
Query: 137 SIQRLVLKYNRIKTVD--SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
S++ L L I T+D S QF +L+ +DL N + + F+P +KL L L+HN+
Sbjct: 465 SLKELNLAACWIVTIDRYSFTQF-PNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNR 523
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS-----RIDQA 249
L + + F GL L+ L+L N L F L L L LG N+I+ +
Sbjct: 524 LEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLKLGFNKITYETTRTLQYP 583
Query: 250 CFEGLTALRILYLDDNQ--LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
F L +L+ L L+ + ++ VP F L L EL +G N L F+ L L+
Sbjct: 584 PFMKLKSLKQLNLEGQKHGIQVVPRNFFQGLSSLQELLLGKNPSVFLDHHQFDPLINLTK 643
Query: 308 LDLRG 312
LD+ G
Sbjct: 644 LDISG 648
Score = 138 (53.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 50/184 (27%), Positives = 89/184 (48%)
Query: 144 KYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTF 203
K + S I Y++ H++L++N + +P F LV+L+L N + ++ F
Sbjct: 86 KITNLTEAISDIPRYTT--HLNLTNNYIQVLPPWSFTNLSALVDLRLEWNLIWKIDEGAF 143
Query: 204 IGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLD 263
GL++L +LNL N ++ + + F LS+LE L L N+I+ I + F L L+ L L
Sbjct: 144 RGLENLTLLNLVENKIQSV-NNSFEGLSNLETLLLSHNQITHIHKDAFTPLVKLKYLSLS 202
Query: 264 DNQLRSVP--TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
N++ + + +L L L + +N D + L L+ L G LT +
Sbjct: 203 RNRISNFSGILEAVQHLPCLEHLDL-INNSIMYLDHSPRSLVSLTHLSFEGNNLTELNFS 261
Query: 322 SMAL 325
+++L
Sbjct: 262 TLSL 265
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 61/216 (28%), Positives = 93/216 (43%)
Query: 116 ETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNI 174
E + C +D T P+++ L L N I+T++ Q L + LSHN+L +
Sbjct: 468 ELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIM 527
Query: 175 PIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL-----FAP 229
F L L L +N LS + F+GL+ L VL L N + R F
Sbjct: 528 ESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLEKLLVLKLGFNKITYETTRTLQYPPFMK 587
Query: 230 LSHLEELDL-GQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV- 286
L L++L+L GQ I + + F+GL++L+ L L N + F L L +L +
Sbjct: 588 LKSLKQLNLEGQKHGIQVVPRNFFQGLSSLQELLLGKNPSVFLDHHQFDPLINLTKLDIS 647
Query: 287 GL---NVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
G + L F L RL L L L +++
Sbjct: 648 GTKDGDRSLYLNSSLFQNLKRLKVLRLENNNLESLV 683
Score = 121 (47.7 bits), Expect = 0.00043, P = 0.00043
Identities = 38/117 (32%), Positives = 57/117 (48%)
Query: 156 QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSS----VNNKTFIGLKSLKV 211
Q SSLQ + L N V + F+P L +L ++ K +N+ F LK LKV
Sbjct: 612 QGLSSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNSSLFQNLKRLKV 671
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLR 268
L L N LE L +F+ L +L+ L N + I+Q+ E L +L + N+L+
Sbjct: 672 LRLENNNLESLVPGMFSSLQNLQVFSLRFNNLKVINQSHLENLKSLMFFDVYGNKLQ 728
>UNIPROTKB|Q86SJ2 [details] [associations]
symbol:AMIGO2 "Amphoterin-induced protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=ISS] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=ISS] [GO:0043069 "negative regulation of
programmed cell death" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AY237005 GO:GO:0016021
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156 EMBL:AB079074
EMBL:AB080610 EMBL:AY454159 EMBL:AL833007 EMBL:BC014103
EMBL:BC047595 EMBL:BC095477 IPI:IPI00238262 RefSeq:NP_001137140.1
RefSeq:NP_862830.1 UniGene:Hs.121520 ProteinModelPortal:Q86SJ2
SMR:Q86SJ2 IntAct:Q86SJ2 STRING:Q86SJ2 DMDM:68052338
PeptideAtlas:Q86SJ2 PRIDE:Q86SJ2 Ensembl:ENST00000266581
Ensembl:ENST00000321382 Ensembl:ENST00000429635
Ensembl:ENST00000550413 GeneID:347902 KEGG:hsa:347902
UCSC:uc001rpk.3 CTD:347902 GeneCards:GC12M047469 HGNC:HGNC:24073
HPA:HPA054004 neXtProt:NX_Q86SJ2 PharmGKB:PA142672626
InParanoid:Q86SJ2 OMA:SCIAMNR OrthoDB:EOG43XV36 PhylomeDB:Q86SJ2
GenomeRNAi:347902 NextBio:99311 ArrayExpress:Q86SJ2 Bgee:Q86SJ2
CleanEx:HS_AMIGO2 Genevestigator:Q86SJ2 GermOnline:ENSG00000139211
Uniprot:Q86SJ2
Length = 522
Score = 204 (76.9 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 61/174 (35%), Positives = 87/174 (50%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQF-YSS 160
AS CP C C T +V+C NL +P L I+RL L YNRI +DS I ++
Sbjct: 37 ASGVCPTACIC--ATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIGLLDSEWIPVSFAK 94
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L + L HN + +I F L L L+ NKL +V N F LK L+VL L N +
Sbjct: 95 LNTLILRHNNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHIS 154
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL-RILYLDD--NQLRSVP 271
L F LS L++L L N +++ + G L +++LD N++ S+P
Sbjct: 155 YLDPSAFGGLSQLQKLYLSGNFLTQFPMDLYVGRFKLAELMFLDVSYNRIPSMP 208
Score = 151 (58.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQ-EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ +DLS+N++ + KL L L HN ++S++ +F +LK L+L N L
Sbjct: 70 IKRLDLSYNRIGLLDSEWIPVSFAKLNTLILRHNNITSISTGSFSTTPNLKCLDLSSNKL 129
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+ + + +F L LE L L N IS +D + F GL+ L+ LYL N L P ++
Sbjct: 130 KTVKNAVFQELKVLEVLLLYNNHISYLDPSAFGGLSQLQKLYLSGNFLTQFPMDLYVGRF 189
Query: 280 MLAEL 284
LAEL
Sbjct: 190 KLAEL 194
>UNIPROTKB|Q9HBL6 [details] [associations]
symbol:LRTM1 "Leucine-rich repeat and transmembrane
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
HSSP:Q9BZR6 eggNOG:KOG0619 EMBL:AF225421 EMBL:BC040732
EMBL:BC074741 IPI:IPI00010227 IPI:IPI00478406 RefSeq:NP_065729.1
UniGene:Hs.591668 ProteinModelPortal:Q9HBL6 SMR:Q9HBL6
STRING:Q9HBL6 DMDM:74761612 PRIDE:Q9HBL6 Ensembl:ENST00000273286
Ensembl:ENST00000493075 GeneID:57408 KEGG:hsa:57408 UCSC:uc003dhl.3
CTD:57408 GeneCards:GC03M054928 H-InvDB:HIX0003383 HGNC:HGNC:25023
HPA:HPA013839 neXtProt:NX_Q9HBL6 PharmGKB:PA142671499
HOGENOM:HOG000290674 HOVERGEN:HBG067803 InParanoid:Q9HBL6
OMA:CLMMLAA OrthoDB:EOG42JNS0 PhylomeDB:Q9HBL6 GenomeRNAi:57408
NextBio:63528 Bgee:Q9HBL6 CleanEx:HS_LRTM1 Genevestigator:Q9HBL6
Uniprot:Q9HBL6
Length = 345
Score = 199 (75.1 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 52/165 (31%), Positives = 81/165 (49%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSS 160
Q CP C C T V C + L IP L P + L L+ N+I + + A +
Sbjct: 16 QVVCSCPDKCYCQSSTNFVDCSQQGLAEIPSHLPPQTRTLHLQDNQIHHLPAFAFRSVPW 75
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L ++LS+N L N+ F + L L L N L S+ ++ F L L+ L+L N +
Sbjct: 76 LMTLNLSNNSLSNLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLRELDLSSNNIS 135
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
LP L +L L + QN++ ++D+A E + ++R+L L DN
Sbjct: 136 HLPTSLGETWENLTILAVQQNQLQQLDRALLESMPSVRLLLLKDN 180
Score = 157 (60.3 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 41/105 (39%), Positives = 56/105 (53%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L NQ+ ++P F L+ L L++N LS++ F GL+ L+VLNL N L L R
Sbjct: 57 LQDNQIHHLPAFAFRSVPWLMTLNLSNNSLSNLAPGAFHGLQHLQVLNLTQNSLLSLESR 116
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSV 270
LF L L ELDL N IS + + E L IL + NQL+ +
Sbjct: 117 LFHSLPQLRELDLSSNNISHLPTSLGETWENLTILAVQQNQLQQL 161
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/114 (33%), Positives = 52/114 (45%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
SS VD S L IP PQ + + LQ N++ + F + L LNL N
Sbjct: 29 SSTNFVDCSQQGLAEIPSH-LPPQTRTLHLQ--DNQIHHLPAFAFRSVPWLMTLNLSNNS 85
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 272
L +L F L HL+ L+L QN + ++ F L LR L L N + +PT
Sbjct: 86 LSNLAPGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLRELDLSSNNISHLPT 139
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 205 (77.2 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 59/194 (30%), Positives = 91/194 (46%)
Query: 116 ETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIP 175
E V C + L P L Q L+L+ N I ++ + F +L +DLS N L ++
Sbjct: 49 EASTVDCNDLGLLNFPARLPADTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVT 108
Query: 176 IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEE 235
+ +L+ + L NKL+ + K GL +L+ L + N L + F L +L
Sbjct: 109 NINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLSAISPGAFVGLHNLLR 168
Query: 236 LDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTL 294
L L NR+ I+ FE L L IL L DN + + +F L L L + G+N+ T +
Sbjct: 169 LHLNSNRLQMINSKWFEALPNLEILMLGDNPILRIKDMNFQPLLKLRSLVIAGINL-TEV 227
Query: 295 ADGAFNGLGRLSAL 308
D A GL L ++
Sbjct: 228 PDDALVGLENLESI 241
Score = 173 (66.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 55/171 (32%), Positives = 79/171 (46%)
Query: 141 LVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N + +V + +Q S L V L N+L +P + L EL +NHN LS+++
Sbjct: 97 LDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLSAIS 156
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F+GL +L L+L N L+ + + F L +LE L LG N I RI F+ L LR
Sbjct: 157 PGAFVGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMLGDNPILRIKDMNFQPLLKLRS 216
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + L VP + + L L + N + A L LDL
Sbjct: 217 LVIAGINLTEVPDDALVGLENLESISFYDNRLNKVPQVALQKAVNLKFLDL 267
Score = 152 (58.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 45/134 (33%), Positives = 67/134 (50%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L L L+ N LSSV N + L + L N L +LP++ LS+L+EL + N +S
Sbjct: 94 LTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLS 153
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
I F GL L L+L+ N+L+ + + F L L L +G N + D F L +
Sbjct: 154 AISPGAFVGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMLGDNPILRIKDMNFQPLLK 213
Query: 305 LSALDLRGAGLTNM 318
L +L + G LT +
Sbjct: 214 LRSLVIAGINLTEV 227
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 48/177 (27%), Positives = 80/177 (45%)
Query: 143 LKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L+ N++ + + + S+LQ + ++HN L I F L+ L LN N+L +N+K
Sbjct: 123 LEENKLTELPEKCLYGLSNLQELYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQMINSK 182
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
F L +L++L L N + + D F PL L L + ++ + GL L +
Sbjct: 183 WFEALPNLEILMLGDNPILRIKDMNFQPLLKLRSLVIAGINLTEVPDDALVGLENLESIS 242
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
DN+L VP + L L + N + G F+ + L L+ G+ NM
Sbjct: 243 FYDNRLNKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNM-----LHLKELGINNM 294
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00078
Identities = 41/143 (28%), Positives = 69/143 (48%)
Query: 170 QLVNIPIRG-FEPQEKLVELQ-LNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLF 227
QL IR F P+ +E ++ N L +N + + ++L L+ N + +
Sbjct: 31 QLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADT-QILLLQTNNIARIEHSTD 89
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
P++ L LDL QN +S + + ++ L +YL++N+L +P L L EL V
Sbjct: 90 FPVN-LTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVN 148
Query: 288 LNVFTTLADGAFNGLGRLSALDL 310
N+ + ++ GAF GL L L L
Sbjct: 149 HNLLSAISPGAFVGLHNLLRLHL 171
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 202 (76.2 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 70/207 (33%), Positives = 94/207 (45%)
Query: 107 CPPDCDCNDETLVVT-CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHV 164
CP C C +E V T C + L +P + S QR+ L NRI V +A Q +L +
Sbjct: 27 CPGACVCYNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNRISHVPAASFQSCRNLTIL 86
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHN-KLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L N L I F L +L L+ N +L V+ TF GL L L+L L +L
Sbjct: 87 WLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCGLRELG 146
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L+ L+ L L N + + F L L L+L N++ SVP +F L L
Sbjct: 147 PGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDR 206
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + AF LGRL L L
Sbjct: 207 LLLHQNHVARVHPHAFRDLGRLMTLYL 233
Score = 179 (68.1 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 51/165 (30%), Positives = 80/165 (48%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+S Q + L N++ ++P F+ L L L+ N L+ ++ F GL L+ L+L N
Sbjct: 57 ASSQRIFLHGNRISHVPAASFQSCRNLTILWLHSNALARIDAAAFTGLTLLEQLDLSDNA 116
Query: 219 -LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 277
L + F L HL L L + + + F GL AL+ LYL DN L+++P +F
Sbjct: 117 QLHVVDPTTFHGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRD 176
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
LG L L + N ++ + AF GL L L L + + H+
Sbjct: 177 LGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHA 221
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/156 (32%), Positives = 72/156 (46%)
Query: 141 LVLKYNRIKTVDSA-IQFYSSLQHVDLSHN-QLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
L L N + +D+A + L+ +DLS N QL + F L L L+ L +
Sbjct: 86 LWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCGLREL 145
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
F GL +L+ L L+ N L+ LPD F L +L L L NRI + + F GL +L
Sbjct: 146 GPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLD 205
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 294
L L N + V +F LG L L + N + L
Sbjct: 206 RLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSML 241
Score = 133 (51.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 49/169 (28%), Positives = 72/169 (42%)
Query: 125 ANLDVIPITLNPSIQRLVLKYN-RIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG---FE 180
A +D T +++L L N ++ VD + L H+ H + G F
Sbjct: 94 ARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTT--FHGLGHLHTLHLDRCGLRELGPGLFR 151
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
L L L N L ++ + TF L +L L L GN + +P+ F L L+ L L Q
Sbjct: 152 GLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQ 211
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
N ++R+ F L L LYL N L +P + L L LR+ N
Sbjct: 212 NHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLMPLRSLQYLRLNDN 260
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 203 (76.5 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 59/173 (34%), Positives = 88/173 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L HN + + F +L L L+HN++++V+ F GL LK LNL N + LP
Sbjct: 67 LSLRHNSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLP 126
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L +L+ LDL N+++ ++ F GL L+IL+L N LR+ P +F L
Sbjct: 127 NTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEY 186
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MGHS---MALGD-YLHW 331
L + N +LA F GL +L L L LT + + H +AL YL W
Sbjct: 187 LGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQW 239
Score = 196 (74.1 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 64/213 (30%), Positives = 97/213 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF-YSSLQHVD 165
CP C C D L C L P ++ L L++N I + S F ++ L +
Sbjct: 35 CPQKCRCED--LQFYCDTQGLLAPPDGVDKGALGLSLRHNSISELSSDQFFGFTQLTWLH 92
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L HNQ+ + F+ KL +L L+ N+++ + N TFI L +L++L+L N + L
Sbjct: 93 LDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFIHLINLQILDLSFNQMTALEPE 152
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
LF L L+ L L N + F +L L L +N+LRS+ F L L EL
Sbjct: 153 LFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNNRLRSLARNGFAGLIKLRELH 212
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N T + F L L L L+ + N+
Sbjct: 213 LEHNHLTKINLAHFPRLVALQFLYLQWNKINNL 245
Score = 180 (68.4 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 56/173 (32%), Positives = 83/173 (47%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N+I TV + A Q L+ ++LS N++ +P F L L L+ N+++++
Sbjct: 91 LHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFIHLINLQILDLSFNQMTALE 150
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ F GL+ L++L+LR N L P R F LE L L NR+ + + F GL LR
Sbjct: 151 PELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNNRLRSLARNGFAGLIKLRE 210
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ N L + F L L L + N L L LDL G
Sbjct: 211 LHLEHNHLTKINLAHFPRLVALQFLYLQWNKINNLTSTMEWKWTTLEKLDLTG 263
Score = 163 (62.4 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 60/196 (30%), Positives = 89/196 (45%)
Query: 138 IQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L NRI K ++ +LQ +DLS NQ+ + F KL L L N L
Sbjct: 112 LKDLNLSSNRITKLPNTTFIHLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLR 171
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ + F +SL+ L L N L L FA L L EL L N +++I+ A F L A
Sbjct: 172 TTPVRAFWDCRSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVA 231
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L+ LYL N++ ++ + L +L + N L F L L L L L+
Sbjct: 232 LQFLYLQWNKINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFETLPSLKILLLDNNKLS 291
Query: 317 NMMGHSMALGDYLHWI 332
N+ +M + L+ I
Sbjct: 292 NLDSQTMDMWKSLNVI 307
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 212 (79.7 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 50/137 (36%), Positives = 70/137 (51%)
Query: 105 AFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV 164
A CP +C C D VV C L V+P + + L L N V + Y L +
Sbjct: 708 ARCPAECSCLDT--VVRCSNKGLKVLPKGIPRDVTELYLDGNEFTQVPLELSNYKHLTLI 765
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS+NQ+ + F +L+ L L++N+L + K F GLKSL++L+L GN + +PD
Sbjct: 766 DLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPD 825
Query: 225 RLFAPLSHLEELDLGQN 241
F LS L L LG N
Sbjct: 826 GAFKDLSSLSHLALGAN 842
Score = 194 (73.4 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 52/156 (33%), Positives = 79/156 (50%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
+++ +DL+ N L I F + L LQL NK+SS+ F L+ L+ L L N L
Sbjct: 49 NVERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRNNL 108
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+ LP+ LF + L LDL +N+I I + F G T ++ L LD NQ+ + +F LG
Sbjct: 109 QVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALG 168
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L + N + L+ +FN + +L L L
Sbjct: 169 DLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNL 204
Score = 192 (72.6 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 49/184 (26%), Positives = 88/184 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVD 165
CP C C+ V C +L +P + +++RL L N + + A +L+ +
Sbjct: 21 CPSQCSCSGTA--VDCHGQSLRSVPRNIPRNVERLDLNANNLTKITKADFAGLKNLRVLQ 78
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N++ +I F+ ++L L+LN N L + F+G L L+L N ++ +P +
Sbjct: 79 LMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQIQGIPRK 138
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F + ++ L L N+IS I+ F L L +L L++N + + SF ++ L R
Sbjct: 139 AFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLSVASFNHMPKLRTFR 198
Query: 286 VGLN 289
+ N
Sbjct: 199 LHSN 202
Score = 192 (72.6 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 52/160 (32%), Positives = 79/160 (49%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CP C C++ VV C+ L IP L +I + L+ N IK + + A Y L+ +D
Sbjct: 264 CPELCTCSNN--VVDCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYKRLRRID 321
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQ+ + F+ L L L NK++ + F GL SL++L L N + L
Sbjct: 322 LSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINCLRVD 381
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L A++ L+L N
Sbjct: 382 SFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQN 421
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/155 (30%), Positives = 75/155 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L ++P R P+ + L LN N L+ + F GLK+L+VL L N + +
Sbjct: 32 VDCHGQSLRSVP-RNI-PRN-VERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIE 88
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L LE L L +N + + + F G T L L L +NQ++ +P +F +
Sbjct: 89 RGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKN 148
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L++ N + + DGAF LG L L L ++ +
Sbjct: 149 LQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRL 183
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 55/167 (32%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S +L IP PQ EL+LN+N+ + + F L L+ +NL N + D+
Sbjct: 500 VDCSGQKLTKIP--DHIPQYT-AELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDI 556
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F S + EL L NR+ + + +GL LR L L N++ V SF L +
Sbjct: 557 EEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVR 616
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N+ T+++ GAF+ L LS L+L A N H LG++L
Sbjct: 617 LLSLYDNLITSMSPGAFDTLHSLSTLNLL-ANPFNCNCHLAWLGEWL 662
Score = 165 (63.1 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 41/132 (31%), Positives = 72/132 (54%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + IP F P ++L + L++N+++ + + +F GL+SL L L GN +
Sbjct: 292 TITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKI 351
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+LP LF L L+ L L N+I+ + F+ L L +L L DN+L+++ +F L
Sbjct: 352 TELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLR 411
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 412 AIQTLHLAQNPF 423
Score = 149 (57.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 42/132 (31%), Positives = 62/132 (46%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L N+I +++ A Q L+ + L+ N L +P F KL L L+ N++
Sbjct: 73 NLRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQI 132
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ K F G +K L L N + + D F L LE L L N ISR+ A F +
Sbjct: 133 QGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLSVASFNHMP 192
Query: 256 ALRILYLDDNQL 267
LR L N L
Sbjct: 193 KLRTFRLHSNNL 204
Score = 141 (54.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 47/162 (29%), Positives = 70/162 (43%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--S 160
A CP C C T V C L IP + L L N +++ F
Sbjct: 485 ADLACPEKCRCEGTT--VDCSGQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQ 542
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS+N++ +I FE + EL L N+L V+ GL L+ L LR N +
Sbjct: 543 LRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGVHYSMLKGLGGLRTLMLRSNRIS 602
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F LS + L L N I+ + F+ L +L L L
Sbjct: 603 CVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNL 644
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 50/167 (29%), Positives = 76/167 (45%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E + E++L N + + F K L+ ++L N + +L
Sbjct: 275 VDCRGKGLTEIPTN--LP-ETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELA 331
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + + F+GL +L++L L+ N++ + SF L L
Sbjct: 332 SDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNL 391
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMG-HSMALGDYL 329
L + N T+A G F+ L + L L A M H L DYL
Sbjct: 392 LSLYDNKLQTIAKGTFSSLRAIQTLHL--AQNPFMCDCHLKWLADYL 436
Score = 125 (49.1 bits), Expect = 0.00025, P = 0.00025
Identities = 39/126 (30%), Positives = 65/126 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L+ N+ + V + K L +++L N + L
Sbjct: 721 VRCSNKGLKVLP-KGI-PRD-VTELYLDGNEFTQVPLE-LSNYKHLTLIDLSNNQISTLS 776
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ +S L L L NR+ I F+GL +LR+L L N + +P +F L L+
Sbjct: 777 NHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSH 836
Query: 284 LRVGLN 289
L +G N
Sbjct: 837 LALGAN 842
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 40/118 (33%), Positives = 54/118 (45%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L L GN +P L + HL +DL N+IS + F ++ L L L N+LR +P
Sbjct: 742 LYLDGNEFTQVPLEL-SNYKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIP 800
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
+F L L L + N + DGAF L LS L L GA H L D++
Sbjct: 801 AKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLAL-GANPLYCDCHMQWLSDWV 857
Score = 38 (18.4 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 265 NQLRSVPTPSFIYLGMLAE 283
N VP+P+ +YLG L +
Sbjct: 1251 NSPSPVPSPAPLYLGGLPQ 1269
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 199 (75.1 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 62/234 (26%), Positives = 107/234 (45%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSL 161
A A CP +C C+ + V C + L IP ++ + L L+ N + ++ + +L
Sbjct: 21 ALAACPQNCHCHSDLQHVICDKVGLQKIP-KVSEKTKLLNLQRNNFPVLATNSFRAMPNL 79
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ L H Q+ + F ++L+ L L+HN + + F L L L L N + +
Sbjct: 80 VSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTE 139
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP L +PL +L L L N+I + F+G LR LYL +N L S+ + + L
Sbjct: 140 LPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENL 199
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM-ALGDYLH--WI 332
A+ + N ++ A + L + L L L ++ ++ + G YL W+
Sbjct: 200 AKFYLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWL 253
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/143 (27%), Positives = 73/143 (51%)
Query: 134 LNPSIQRLVLKYN--RIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
L+P + +L+ N +I+ + S A Q L+ + LS N L ++ + E L + L
Sbjct: 145 LSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYL 204
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS-HLEELDLGQNRISRIDQA 249
+ N+LSS + L+ ++ L L N L+ +PD F +LE L L + +
Sbjct: 205 DRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDG 264
Query: 250 CFEGLTALRILYLDDNQLRSVPT 272
F G+T L+ ++L++N+L +P+
Sbjct: 265 AFLGVTTLKHVHLENNRLHQLPS 287
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L +P + ++ L L N+ V + + LQ VDL
Sbjct: 597 CPQECACLDT--VVRCSNKHLQALPKGIPKNVTELYLDGNQFMLVPGQLSTFKYLQLVDL 654
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + L + +
Sbjct: 655 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGI 714
Query: 227 FAPLSHLEELDLGQN 241
FA ++ L L +G N
Sbjct: 715 FADVTSLSHLAIGAN 729
Score = 186 (70.5 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C++ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 142 SSGSCPAMCACSNG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKL 199
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F+ L L L NK++ + F GL +L++L L N +
Sbjct: 200 RRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLFTLQLLLLNANKINC 259
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ F L +L L L N+I + + F L A++ L+L N
Sbjct: 260 VRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLHLAQN 303
Score = 177 (67.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 50/158 (31%), Positives = 75/158 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E VV C L IP + + L L N I +++ F + L+ +
Sbjct: 376 CPHKCRC--EASVVECSSLKLSKIPERIPQATAELRLNNNEISILEATGMFKKLTHLKKI 433
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE + EL L N+L S+ + F GL L+ L LR N + + +
Sbjct: 434 NLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHN 493
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F L ++ L L N+I+ I F+ L AL L L
Sbjct: 494 DSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNL 531
Score = 165 (63.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 42/132 (31%), Positives = 69/132 (52%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + +IP F P KL + L++N++S + F GL+SL L L GN +
Sbjct: 174 TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKI 233
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I+ + F+ L L +L L DN+++ + +F L
Sbjct: 234 TDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLR 293
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 294 AIQTLHLAQNPF 305
Score = 165 (63.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 56/167 (33%), Positives = 82/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
V+ S +L IP R PQ EL+LN+N++S + F L LK +NL N + ++
Sbjct: 387 VECSSLKLSKIPER--IPQAT-AELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEI 443
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F + + EL L N++ I F GL LR L L +N++ + SF L +
Sbjct: 444 EDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVR 503
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N T++ GAF+ L LS L+L A N LGD+L
Sbjct: 504 LLSLYDNQIATISPGAFDTLQALSTLNLL-ANPFNCNCQLAWLGDWL 549
Score = 122 (48.0 bits), Expect = 0.00050, P = 0.00050
Identities = 36/128 (28%), Positives = 61/128 (47%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
E + E++L N + S+ F + L+ ++L N + ++ F L L L L N+
Sbjct: 173 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNK 232
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + + F GL L++L L+ N++ V +F L L+ L + N LA G F L
Sbjct: 233 ITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSL 292
Query: 303 GRLSALDL 310
+ L L
Sbjct: 293 RAIQTLHL 300
Score = 115 (45.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/105 (27%), Positives = 58/105 (55%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++++ L N++ + D A + +S+ + L+ NQL +I F + L L L +N++S
Sbjct: 430 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 489
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
++N +F GL+++++L+L N + + F L L L+L N
Sbjct: 490 CIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLAN 534
Score = 106 (42.4 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 34/107 (31%), Positives = 55/107 (51%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K++ L L GN +P +L + +L+ +DL N+IS + + F ++ L L L N
Sbjct: 624 KNVTELYLDGNQFMLVPGQL-STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNA 682
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ +P +F L L L + N +TL +G F + LS L + GA
Sbjct: 683 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAI-GA 728
Score = 102 (41.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS N + IP + F L LQL+ N++S + F L+ L+VL L N + +P
Sbjct: 3 DLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPV 62
Query: 225 RLFAPLSHLEELDLGQNRI 243
F + L L N +
Sbjct: 63 SSFNHMPKLRTFRLHSNHL 81
Score = 70 (29.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 143 LKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L N I+ + A + + L+++ L NQ+ I F L L LN+N +S++
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVS 63
Query: 202 TFIGLKSLKVLNLRGNFL 219
+F + L+ L N L
Sbjct: 64 SFNHMPKLRTFRLHSNHL 81
Score = 69 (29.3 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L+++ L +N++ S+ SF + L L + N + AF GL L L L G ++
Sbjct: 649 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIS 708
Query: 317 NM 318
+
Sbjct: 709 TL 710
Score = 69 (29.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
E +T +R L+ N ++S+P +F L + + N + +A AF GL L++L L
Sbjct: 173 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY 229
Query: 312 GAGLTNM 318
G +T++
Sbjct: 230 GNKITDL 236
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 206 (77.6 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 59/178 (33%), Positives = 92/178 (51%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHV---DLSHNQLVNIPIRGFEPQEKLVELQLNH 192
PS+Q+L L ++ +++ + +SSLQ++ DLSHN+ + P F P + L L L+
Sbjct: 396 PSLQKLNLNKCQLSFINN--RTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSR 453
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N ++ +NN F GL +LK LNL ++ + F +LE LDLG N I ++ F
Sbjct: 454 NPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFR 513
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L+ L L N L+ + SF L L L + N + + F+GL +L L L
Sbjct: 514 PLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKL 571
Score = 193 (73.0 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 58/178 (32%), Positives = 88/178 (49%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFY--SSLQHVDLSHNQ-LVNIPIRGFEPQEKLVELQLNH 192
P ++ LV + N + + Q + L +DL N L+ + F L +L LN
Sbjct: 347 PKLETLVFQKN-VTNAEGIKQLAKCTRLLFLDLGQNSDLIYLNDSEFNALPSLQKLNLNK 405
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
+LS +NN+T+ L++L L+L N + PD F+PL HLE L L +N I+ ++ F
Sbjct: 406 CQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNNLAFS 465
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
GL AL+ L L + ++ SF L L +G N TL G F L +L +L L
Sbjct: 466 GLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLIL 523
Score = 178 (67.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 56/170 (32%), Positives = 82/170 (48%)
Query: 152 DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKV 211
DS SLQ ++L+ QL I R + + L L L+HNK S + F LK L+
Sbjct: 389 DSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLEF 448
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L+L N + +L + F+ L L+EL+L I ID+ F L +L L DN +R++
Sbjct: 449 LSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIRTLN 508
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
+F L L L + N L +F+GL L +LDL L+ H
Sbjct: 509 HGTFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEH 558
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 58/174 (33%), Positives = 87/174 (50%)
Query: 148 IKTVD--SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIG 205
I T+D S QF +L+ +DL N + + F P +KL L L+HN L + +F G
Sbjct: 480 IVTIDRYSFTQF-PNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSG 538
Query: 206 LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS-----RIDQACFEGLTALRIL 260
L +L+ L+L N L + LF+ L L L LG N+I+ + F L +L+ L
Sbjct: 539 LTNLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLKQL 598
Query: 261 YLDDNQ--LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+ + ++ VP+ F LG L EL +G N L F+ L L+ LD+ G
Sbjct: 599 NLEGQRHGIQVVPSNFFQGLGSLQELLLGKNPSVFLDHHQFDPLINLTKLDISG 652
Score = 146 (56.5 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 58/192 (30%), Positives = 90/192 (46%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N I +++ A +L+ ++L+ +V I F L L L N +
Sbjct: 446 LEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNIR 505
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++N+ TF LK L+ L L N L+ L F+ L++L LDL N +S + F GL
Sbjct: 506 TLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEK 565
Query: 257 LRILYLDDNQL-----RSVPTPSFIYLGMLAELRV-GL-NVFTTLADGAFNGLGRLSALD 309
L IL L N++ R++ P FI L L +L + G + + F GLG L L
Sbjct: 566 LLILKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFFQGLGSLQEL- 624
Query: 310 LRGAGLTNMMGH 321
L G + + H
Sbjct: 625 LLGKNPSVFLDH 636
Score = 138 (53.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 54/182 (29%), Positives = 79/182 (43%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L +N+ K+ D A L+ + LS N + + F L EL L +
Sbjct: 421 NLTSLDLSHNKFKSFPDFAFSPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWI 480
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+++ +F +L+VL+L N + L F PL L+ L L N + ++ F GLT
Sbjct: 481 VTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGLT 540
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT-----TLADGAFNGLGRLSALDL 310
LR L L N L F L L L++G N T TL F L L L+L
Sbjct: 541 NLRSLDLMYNSLSYFHEHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLKQLNL 600
Query: 311 RG 312
G
Sbjct: 601 EG 602
Score = 136 (52.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 144 KYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTF 203
K + S I Y++ H++L+HN++ +P F LV+L+L N + ++ F
Sbjct: 90 KITNLTEAISDIPRYTT--HLNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAF 147
Query: 204 IGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLD 263
GL++L +LNL N ++ + + F LS L+ L L N+I+ I + F L L+ L L
Sbjct: 148 RGLENLTLLNLVENKIQSV-NNSFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLS 206
Query: 264 DNQL 267
N +
Sbjct: 207 RNNI 210
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 39/109 (35%), Positives = 55/109 (50%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
LNL N ++ LP F LS L +L L N I +ID+ F GL L +L L +N+++SV
Sbjct: 108 LNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFRGLENLTLLNLVENKIQSVN 167
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMG 320
SF L L L + N T + AF L +L L L +++ G
Sbjct: 168 N-SFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSG 215
>RGD|727911 [details] [associations]
symbol:Amigo2 "adhesion molecule with Ig like domain 2"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0007156 "homophilic
cell adhesion" evidence=IPI] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=IPI] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043069 "negative regulation
of programmed cell death" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:727911 GO:GO:0005634 GO:GO:0043066
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007157
InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156
GeneTree:ENSGT00530000063545 CTD:347902 OrthoDB:EOG43XV36
EMBL:AY237730 EMBL:AB078879 IPI:IPI00331944 RefSeq:NP_877968.2
UniGene:Rn.98123 ProteinModelPortal:Q7TNJ4 STRING:Q7TNJ4
PRIDE:Q7TNJ4 Ensembl:ENSRNOT00000009199 GeneID:300186
KEGG:rno:300186 UCSC:RGD:727911 InParanoid:Q7TNJ4 NextBio:646483
Genevestigator:Q7TNJ4 GermOnline:ENSRNOG00000007032 Uniprot:Q7TNJ4
Length = 520
Score = 202 (76.2 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 59/175 (33%), Positives = 85/175 (48%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS---AIQFYS 159
+S CP C C T +V+C NL +P L I+RL L YNRI +D+ + F
Sbjct: 36 SSGLCPTACIC--ATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIGLLDADWIPVSFVK 93
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
L + + HN + +I F L L L+ N+L SV + F LK L+VL L N +
Sbjct: 94 -LSTLIVRHNNITSISTGSFSTTPNLKCLDLSSNRLKSVKSAMFQELKVLEVLLLYNNHI 152
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG---LTALRILYLDDNQLRSVP 271
L F LSHL++L L N +++ + G L L L + NQ+ S+P
Sbjct: 153 SYLDPAAFGGLSHLQKLYLSGNFLTKFPMDLYVGRFKLADLTFLDVSYNQIASIP 207
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 48/155 (30%), Positives = 79/155 (50%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQE--KLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
++ +DLS+N+ + + + P KL L + HN ++S++ +F +LK L+L N
Sbjct: 69 IKRLDLSYNR-IGLLDADWIPVSFVKLSTLIVRHNNITSISTGSFSTTPNLKCLDLSSNR 127
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L+ + +F L LE L L N IS +D A F GL+ L+ LYL N L P ++
Sbjct: 128 LKSVKSAMFQELKVLEVLLLYNNHISYLDPAAFGGLSHLQKLYLSGNFLTKFPMDLYVGR 187
Query: 279 GMLAELRVGLNV-FTTLADGAFNGLGRLSALDLRG 312
LA+L L+V + +A + + + LRG
Sbjct: 188 FKLADLTF-LDVSYNQIASIPMHHINLVPGKQLRG 221
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 204 (76.9 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 58/194 (29%), Positives = 91/194 (46%)
Query: 116 ETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIP 175
E V C + L P L Q L+L+ N I ++ + F +L +DLS N L ++
Sbjct: 49 EASTVDCNDLGLLNFPARLPADTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVT 108
Query: 176 IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEE 235
+ +L+ + L NKL+ + K GL +L+ L + N L + F L +L
Sbjct: 109 NINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLSTISPGAFIGLHNLLR 168
Query: 236 LDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTL 294
L L NR+ I+ F+ L L IL L DN + + +F L L L + G+N+ T +
Sbjct: 169 LHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIAGINL-TEI 227
Query: 295 ADGAFNGLGRLSAL 308
D A GL L ++
Sbjct: 228 PDDALAGLENLESI 241
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 55/171 (32%), Positives = 79/171 (46%)
Query: 141 LVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N + +V + +Q S L V L N+L +P + L EL +NHN LS+++
Sbjct: 97 LDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLSTIS 156
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
FIGL +L L+L N L+ + + F L +LE L LG N I RI F+ L LR
Sbjct: 157 PGAFIGLHNLLRLHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRS 216
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + L +P + L L + N + + A L LDL
Sbjct: 217 LVIAGINLTEIPDDALAGLENLESISFYDNRLSKVPQVALQKAVNLKFLDL 267
Score = 155 (59.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 46/140 (32%), Positives = 70/140 (50%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L L L+ N LSSV N + L + L N L +LP++ LS+L+EL + N +S
Sbjct: 94 LTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLS 153
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
I F GL L L+L+ N+L+ + + F L L L +G N + D F L +
Sbjct: 154 TISPGAFIGLHNLLRLHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVK 213
Query: 305 LSALDLRGAGLTNMMGHSMA 324
L +L + G LT + ++A
Sbjct: 214 LRSLVIAGINLTEIPDDALA 233
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 48/177 (27%), Positives = 80/177 (45%)
Query: 143 LKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L+ N++ + + + S+LQ + ++HN L I F L+ L LN N+L +N++
Sbjct: 123 LEENKLTELPEKCLYGLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSQ 182
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
F L +L++L L N + + D F PL L L + ++ I GL L +
Sbjct: 183 WFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIAGINLTEIPDDALAGLENLESIS 242
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
DN+L VP + L L + N + G F+ + L L+ G+ NM
Sbjct: 243 FYDNRLSKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNM-----LHLKELGINNM 294
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 170 QLVNIPIRG-FEPQEKLVELQ-LNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLF 227
QL IR F P+ +E ++ N L +N + + ++L L+ N + +
Sbjct: 31 QLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADT-QILLLQTNNIARIEHSTD 89
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
P++ L LDL QN +S + + ++ L +YL++N+L +P L L EL V
Sbjct: 90 FPVN-LTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVN 148
Query: 288 LNVFTTLADGAFNGLGRLSALDL 310
N+ +T++ GAF GL L L L
Sbjct: 149 HNLLSTISPGAFIGLHNLLRLHL 171
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 201 (75.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 62/202 (30%), Positives = 96/202 (47%)
Query: 107 CPPDCDCNDE-TLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHV 164
CPP C C E + V C N+ +P + L N +K + + A SL+ +
Sbjct: 28 CPPTCTCTQEKSCSVLCDHVNMMDLPKEFPCEASSINLDKNSLKFLSERAFGTLPSLKTL 87
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L +N + I F+ LVEL++ HN+ + ++ +TF LK L L+L L ++P
Sbjct: 88 SLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSDCNLFNMP 147
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
DR+F L+EL QN R+ A G+ L +YL+ N++ +V S + L L
Sbjct: 148 DRIFLEQITLKELLCFQNNFRRVPGA-LRGMENLTHVYLERNKIEAVAYNSLLGLTSLKY 206
Query: 284 LRVGLNVFTTLADGAFNGLGRL 305
L + N + D AF L RL
Sbjct: 207 LNLQENRINVIHDEAFKDLIRL 228
Score = 197 (74.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 56/166 (33%), Positives = 91/166 (54%)
Query: 122 CKEANLDVIPITLN--PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRG 178
C + N +P L ++ + L+ N+I+ V +++ +SL++++L N++ I
Sbjct: 162 CFQNNFRRVPGALRGMENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEA 221
Query: 179 FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDL 238
F+ +L LN N L + + F GL +LK+LNL GN L ++ F+ L LE L L
Sbjct: 222 FKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYL 281
Query: 239 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF--IY-LGML 281
+NR+S I+ FE LT+L L+L+ N L S+P F IY +G L
Sbjct: 282 DRNRLSYIEDGSFENLTSLITLHLNSNNLTSLPFSVFQPIYFIGRL 327
Score = 191 (72.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 51/172 (29%), Positives = 84/172 (48%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L+ N + V A++ +L HV L N++ + L L L N+++
Sbjct: 156 TLKELLCFQNNFRRVPGALRGMENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRIN 215
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++++ F L L+ L N L DLP + F LS+L+ L+LG N ++ + + F L
Sbjct: 216 VIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVE 275
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL---GRL 305
L +LYLD N+L + SF L L L + N T+L F + GRL
Sbjct: 276 LEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLTSLPFSVFQPIYFIGRL 327
Score = 172 (65.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 50/152 (32%), Positives = 73/152 (48%)
Query: 169 NQLVNIP--IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
N +P +RG E L + L NK+ +V + +GL SLK LNL+ N + + D
Sbjct: 165 NNFRRVPGALRGME---NLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEA 221
Query: 227 FAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
F L LE L N + + Q F+GL+ L++L L N L +V F L L L +
Sbjct: 222 FKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYL 281
Query: 287 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
N + + DG+F L L L L LT++
Sbjct: 282 DRNRLSYIEDGSFENLTSLITLHLNSNNLTSL 313
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 41/130 (31%), Positives = 66/130 (50%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L+ NRI + D A + L++ L+ N LV++P + F+ L L L N L
Sbjct: 203 SLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLL 262
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++V+ F L L+VL L N L + D F L+ L L L N ++ + + F+ +
Sbjct: 263 TNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLTSLPFSVFQPIY 322
Query: 256 ALRILYLDDN 265
+ LYL N
Sbjct: 323 FIGRLYLFRN 332
>MGI|MGI:2153463 [details] [associations]
symbol:Rxfp2 "relaxin/insulin-like family peptide receptor
2" species:10090 "Mus musculus" [GO:0001556 "oocyte maturation"
evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IMP] [GO:0007193 "adenylate
cyclase-inhibiting G-protein coupled receptor signaling pathway"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0008584 "male gonad development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IMP] [GO:0017046 "peptide hormone
binding" evidence=ISO] [GO:0030819 "positive regulation of cAMP
biosynthetic process" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002172 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 MGI:MGI:2153463 GO:GO:0016021
GO:GO:0005886 GO:GO:0043066 GO:GO:0008285 GO:GO:0007189
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0007193
GO:GO:0030819 GO:GO:0008584 GO:GO:0017046 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 GO:GO:0001556 GO:GO:0016500
HOVERGEN:HBG026354 GeneTree:ENSGT00650000093266
HOGENOM:HOG000049056 CTD:122042 KO:K04307 OrthoDB:EOG47M1XF
OMA:KILCCAD EMBL:AF346501 EMBL:AC077689 EMBL:BC120741
IPI:IPI00131616 RefSeq:NP_536716.2 UniGene:Mm.444643
ProteinModelPortal:Q91ZZ5 SMR:Q91ZZ5 STRING:Q91ZZ5
PhosphoSite:Q91ZZ5 PRIDE:Q91ZZ5 Ensembl:ENSMUST00000065745
GeneID:140498 KEGG:mmu:140498 InParanoid:Q0VB90 NextBio:369832
Bgee:Q91ZZ5 CleanEx:MM_RXFP2 Genevestigator:Q91ZZ5
GermOnline:ENSMUSG00000053368 Uniprot:Q91ZZ5
Length = 737
Score = 204 (76.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 57/174 (32%), Positives = 93/174 (53%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++++ L++N I + A +LQ + LSHN + ++ F+ +L L L+ N ++
Sbjct: 146 LRKIYLQHNCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPIT 205
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ K+F+GL SL L++ GN LE LP+ L A + L +DL N I I + F +
Sbjct: 206 RISQKSFMGLNSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDS 265
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +L+L NQ+ VP +F L L EL + N+ T L F+ L L L+L
Sbjct: 266 LTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNMITKLPVHLFSDLHLLQKLNL 319
Score = 162 (62.1 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 54/215 (25%), Positives = 96/215 (44%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDL 166
P C C + L C +A+L +P ++ ++ L LK N+I + + Y+ L+ + L
Sbjct: 95 PQHCYCRENEL--ECVKADLKAVP-KVSSNVTLLSLKKNKIHRLPVKVFSRYTELRKIYL 151
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
HN + +I R F L L L+HN ++S+ F L L L L N + + +
Sbjct: 152 QHNCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKS 211
Query: 227 FAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
F L+ L L + NR+ + + + L + L +N ++ + +F+ L L +
Sbjct: 212 FMGLNSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVLFL 271
Query: 287 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
N + + F+ L L LDL +T + H
Sbjct: 272 PRNQIGFVPEKTFSSLKNLGELDLSSNMITKLPVH 306
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L+L N I + + +SL + + N+L +P +L + L +N + +
Sbjct: 197 LILDDNPITRISQKSFMGLNSLFFLSMVGNRLEALPETLCAQMPQLNWVDLANNGIKYIT 256
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
N TF+ SL VL L N + +P++ F+ L +L ELDL N I+++ F L L+
Sbjct: 257 NSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNMITKLPVHLFSDLHLLQK 316
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L L N L V F L L L + ++ G F + LS + L+
Sbjct: 317 LNLSSNPLLYVHKNQFGSLKQLQSLDLERIEIPNISTGMFQPMKNLSHIYLK 368
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
++ +L+L+ N + LP ++F+ + L ++ L N I+ I + F GL L+ILYL N +
Sbjct: 121 NVTLLSLKKNKIHRLPVKVFSRYTELRKIYLQHNCITHISRRAFLGLHNLQILYLSHNCI 180
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGD 327
S+ F L LA L + N T ++ +F GL L L + G L + A
Sbjct: 181 TSLRPGIFKDLHQLAWLILDDNPITRISQKSFMGLNSLFFLSMVGNRLEALPETLCAQMP 240
Query: 328 YLHWI 332
L+W+
Sbjct: 241 QLNWV 245
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 43/183 (23%), Positives = 77/183 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L +N I ++ I + L + L N + I + F L L + N+L
Sbjct: 169 NLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQKSFMGLNSLFFLSMVGNRL 228
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + L ++L N ++ + + F L L L +N+I + + F L
Sbjct: 229 EALPETLCAQMPQLNWVDLANNGIKYITNSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLK 288
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N + +P F L +L +L + N + F L +L +LDL +
Sbjct: 289 NLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNPLLYVHKNQFGSLKQLQSLDLERIEI 348
Query: 316 TNM 318
N+
Sbjct: 349 PNI 351
>UNIPROTKB|C9JEE2 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0007610 "behavior"
evidence=IEA] [GO:0035418 "protein localization to synapse"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0060076 "excitatory synapse" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007610 InterPro:IPR003591 SMART:SM00369
GO:GO:0050808 InterPro:IPR000372 SMART:SM00013 GO:GO:0035418
EMBL:AC016670 HGNC:HGNC:19408 IPI:IPI00916020
ProteinModelPortal:C9JEE2 SMR:C9JEE2 STRING:C9JEE2
Ensembl:ENST00000416268 ArrayExpress:C9JEE2 Bgee:C9JEE2
Uniprot:C9JEE2
Length = 223
Score = 181 (68.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 48/152 (31%), Positives = 73/152 (48%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S L + L +N L + F +L L L+HN + SV F L+ +K L L N
Sbjct: 65 SGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQ 124
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
+ LP+ F P+ +L +DL N++ + F GL L L++ N ++ VP F
Sbjct: 125 ITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDC 184
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L +G N +LA +F GL +L+ L L
Sbjct: 185 RSLKFLDIGYNQLKSLARNSFAGLFKLTELHL 216
Score = 177 (67.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 42/128 (32%), Positives = 69/128 (53%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I +V A Q ++ + LS NQ+ +P F P L + L++NKL ++
Sbjct: 94 LYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALA 153
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F GL+ L L++R N ++ +P R+F L+ LD+G N++ + + F GL L
Sbjct: 154 PDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTE 213
Query: 260 LYLDDNQL 267
L+L+ N L
Sbjct: 214 LHLEHNDL 221
Score = 176 (67.0 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 55/189 (29%), Positives = 91/189 (48%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQ 162
A + CP C C L C+ NL P L+ + L L+YN + + + QF +Q
Sbjct: 35 APSGCPQLCRCEGRLLY--CEALNLTEAPHNLS-GLLGLSLRYNSLSELRAG-QFTGLMQ 90
Query: 163 --HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
+ L HN + ++ F+ ++ EL L+ N+++ + N TF + +L+ ++L N L+
Sbjct: 91 LTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQ 150
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
L LF L L L + N I + F+ +L+ L + NQL+S+ SF L
Sbjct: 151 ALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFK 210
Query: 281 LAELRVGLN 289
L EL + N
Sbjct: 211 LTELHLEHN 219
Score = 112 (44.5 bits), Expect = 0.00036, P = 0.00036
Identities = 33/106 (31%), Positives = 49/106 (46%)
Query: 206 LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
L L L+LR N L +L F L L L L N I + F+ L ++ L L N
Sbjct: 64 LSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSN 123
Query: 266 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
Q+ +P +F + L + + N LA F+GL +L+ L +R
Sbjct: 124 QITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMR 169
Score = 111 (44.1 bits), Expect = 0.00047, P = 0.00047
Identities = 38/140 (27%), Positives = 61/140 (43%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L+ L L +N LS + F GL L L L N + + F L ++EL L N+I+
Sbjct: 67 LLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQIT 126
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
++ F + LR + L N+L+++ F L L L + N + F
Sbjct: 127 QLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRS 186
Query: 305 LSALDLRGAGLTNMMGHSMA 324
L LD+ L ++ +S A
Sbjct: 187 LKFLDIGYNQLKSLARNSFA 206
>ZFIN|ZDB-GENE-040426-1225 [details] [associations]
symbol:rxfp2b "relaxin/insulin-like family peptide
receptor 2b" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 ZFIN:ZDB-GENE-040426-1225
GO:GO:0016021 GO:GO:0004930 InterPro:IPR003591 SMART:SM00369
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 EMBL:EF685705
IPI:IPI00836966 UniGene:Dr.17695 ProteinModelPortal:E6Y2S3
ArrayExpress:E6Y2S3 Bgee:E6Y2S3 Uniprot:E6Y2S3
Length = 754
Score = 204 (76.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 64/199 (32%), Positives = 96/199 (48%)
Query: 126 NLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEK 184
NLD + +QRL L+ N I+TV S A +LQ + LS N + + F K
Sbjct: 148 NLDDYIFSKYTQMQRLFLQNNIIETVSSRAFSRLFTLQRLFLSQNNITYLGPGVFRDLHK 207
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR-LFAPLSHLEELDLGQNRI 243
L L L+HN L + TFIGL+SL L++ L LP+ L + L LD +N +
Sbjct: 208 LDWLVLDHNPLKHITRDTFIGLRSLTYLSMVNVSLMRLPNSSLCQHMPLLTWLDFAENDV 267
Query: 244 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 303
++ + T L +L DN ++++P +F LG LAEL + N + L F L
Sbjct: 268 ELLNYSTLMTCTELTVLTFHDNNIKTLPENTFHSLGSLAELDLSCNRISKLPKNTFKSLK 327
Query: 304 RLSALDLRGAGLTNM-MGH 321
L L++ L ++ GH
Sbjct: 328 YLKKLNISHNPLLHIHTGH 346
Score = 155 (59.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 56/205 (27%), Positives = 89/205 (43%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDL 166
P C C V C + NL V+PI L+ ++ L LK NRI+ +D I Y+ +Q + L
Sbjct: 109 PQSCSCKKTE--VECVDVNLHVVPI-LSSNVTWLSLKNNRIRNLDDYIFSKYTQMQRLFL 165
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
+N + + R F L L L+ N ++ + F L L L L N L+ +
Sbjct: 166 QNNIIETVSSRAFSRLFTLQRLFLSQNNITYLGPGVFRDLHKLDWLVLDHNPLKHITRDT 225
Query: 227 FAPLSHLEELDLGQNRISRIDQACF-EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L L + + R+ + + + L L +N + + + + L L
Sbjct: 226 FIGLRSLTYLSMVNVSLMRLPNSSLCQHMPLLTWLDFAENDVELLNYSTLMTCTELTVLT 285
Query: 286 VGLNVFTTLADGAFNGLGRLSALDL 310
N TL + F+ LG L+ LDL
Sbjct: 286 FHDNNIKTLPENTFHSLGSLAELDL 310
Score = 147 (56.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 50/170 (29%), Positives = 79/170 (46%)
Query: 141 LVLKYNRIK--TVDSAIQFYSSLQHVDLSHNQLVNIPIRGF-EPQEKLVELQLNHNKLSS 197
LVL +N +K T D+ I SL ++ + + L+ +P + L L N +
Sbjct: 211 LVLDHNPLKHITRDTFIGL-RSLTYLSMVNVSLMRLPNSSLCQHMPLLTWLDFAENDVEL 269
Query: 198 VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL 257
+N T + L VL N ++ LP+ F L L ELDL NRIS++ + F+ L L
Sbjct: 270 LNYSTLMTCTELTVLTFHDNNIKTLPENTFHSLGSLAELDLSCNRISKLPKNTFKSLKYL 329
Query: 258 RILYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLS 306
+ L + N L + T F +L L L + G+ + + F +G LS
Sbjct: 330 KKLNISHNPLLHIHTGHFDHLVQLQSLSLEGIEI-PNITTKMFLPMGNLS 378
Score = 117 (46.2 bits), Expect = 0.00085, P = 0.00085
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 153 SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVL 212
S Q L +D + N + + +L L + N + ++ TF L SL L
Sbjct: 249 SLCQHMPLLTWLDFAENDVELLNYSTLMTCTELTVLTFHDNNIKTLPENTFHSLGSLAEL 308
Query: 213 NLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 272
+L N + LP F L +L++L++ N + I F+ L L+ L L+ ++ ++ T
Sbjct: 309 DLSCNRISKLPKNTFKSLKYLKKLNISHNPLLHIHTGHFDHLVQLQSLSLEGIEIPNITT 368
Query: 273 PSFIYLGMLAEL 284
F+ +G L+ +
Sbjct: 369 KMFLPMGNLSHI 380
>RGD|1309087 [details] [associations]
symbol:Lrrc32 "leucine rich repeat containing 32" species:10116
"Rattus norvegicus" [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:1309087 EMBL:CH473956
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL OrthoDB:EOG4DBTF0
IPI:IPI00368447 RefSeq:NP_001163905.1 UniGene:Rn.66859
Ensembl:ENSRNOT00000020520 GeneID:293135 KEGG:rno:293135
UCSC:RGD:1309087 NextBio:635427 Uniprot:D3ZVD5
Length = 663
Score = 203 (76.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 66/202 (32%), Positives = 102/202 (50%)
Query: 114 NDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLV 172
N E L C +L +P L+ IQ L L NR++++ S + FY++L+H+DLS N++
Sbjct: 31 NKEAL---CHGLSLLQVPSVLSLDIQALYLSGNRLQSILVSPLSFYTALRHLDLSDNEIS 87
Query: 173 NIPIRGFEPQEKLVELQLNHNKLSS--VNNKTFIGLKSLKV-LNLRGNFLE-DLPDRLFA 228
+ F+ L L L HN+L++ N +G L V L+L GN L L +RL
Sbjct: 88 FLQPGVFQALPYLEHLNLAHNRLAAGMALNSGGLGRLPLVVSLDLSGNSLHGSLVERLLG 147
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 288
L L L +N ++R+ + F G+ A+ L L N L + +F L L L +
Sbjct: 148 EAPRLRTLSLAENSLTRLARHTFWGMPAMEQLDLHSNVLMDIEDGAFEALPQLTHLNLSR 207
Query: 289 NVFTTLADGAFNGLGRLSALDL 310
N T ++D F+ L +L LDL
Sbjct: 208 NSLTCISD--FS-LQQLQVLDL 226
Score = 183 (69.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 66/201 (32%), Positives = 101/201 (50%)
Query: 126 NLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEK 184
N + P++ + L L YN I+ V + ++ +SL+ ++LS N L + R
Sbjct: 309 NASIHPLS---QLLNLDLSYNEIELVPAGFLEHLTSLRFLNLSRNCLRSFEARRAGSLPC 365
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
LV L L+HN L ++ T + L SLK L L+ N L +LP FA L+ L+ L+L N++S
Sbjct: 366 LVLLDLSHNVLEALELGTKV-LGSLKTLLLQDNTLRELPPYTFAGLASLQRLNLQGNQVS 424
Query: 245 RID-QA------C--FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 295
QA C F G+ L L + N + ++ SF++ L EL + N +A
Sbjct: 425 PCGGQAEPGPPGCVDFSGIPTLHFLNMAGNSMETLRAGSFLHTP-LTELDLSANPGLDVA 483
Query: 296 DGAFNGL-GRLSALDLRGAGL 315
GA GL L L+L+G GL
Sbjct: 484 TGALVGLEASLEVLELQGNGL 504
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 200 (75.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 63/207 (30%), Positives = 98/207 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E +V C+ +P ++ Q L L+YN + + QF + L +
Sbjct: 30 CPVSCRC--EGKIVYCESGGFQDVPENISLGCQGLSLRYNSLLLL-LPYQFAHLNQLVWL 86
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L HN + + F+ +L EL L+ NK++ + N TF + +L+ L+L N ++DL
Sbjct: 87 YLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVP 146
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
F L L+ L L N I I F +L L L N+LR++ +F+ L L EL
Sbjct: 147 GHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTEL 206
Query: 285 RVGLNVFTTLADGAFNGLGRLSALDLR 311
+ N F+ + F L L AL L+
Sbjct: 207 HLEHNQFSRINFFLFPRLLNLQALYLQ 233
Score = 190 (71.9 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 59/173 (34%), Positives = 83/173 (47%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I TVD A Q L+ + LS N++ + FE L L L++N++ +
Sbjct: 86 LYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLV 145
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F GL+ L+ L+LR N + +P R F LE LDLG NR+ I + F GL L
Sbjct: 146 PGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTE 205
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ NQ + F L L L + N T+ G+ L LDL G
Sbjct: 206 LHLEHNQFSRINFFLFPRLLNLQALYLQWNRIRTVVQGSPWTWHTLQKLDLSG 258
Score = 179 (68.1 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 55/182 (30%), Positives = 90/182 (49%)
Query: 138 IQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L+L N+I + + + +L+++DLS+NQ+ ++ F KL L L N +
Sbjct: 107 LKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIR 166
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
S+ +TF+ +SL+ L+L N L + F L L EL L N+ SRI+ F L
Sbjct: 167 SIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLN 226
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L+ LYL N++R+V S L +L + N L F L L L+L ++
Sbjct: 227 LQALYLQWNRIRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKIS 286
Query: 317 NM 318
N+
Sbjct: 287 NV 288
Score = 146 (56.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 52/198 (26%), Positives = 91/198 (45%)
Query: 136 PSIQRLVLKYNRIKT-VDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P+++ L L YN+++ V LQ++ L N + +IP+R F L L L +N+
Sbjct: 129 PNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNR 188
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ TF+GL L L+L N + LF L +L+ L L NRI + Q
Sbjct: 189 LRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLLNLQALYLQWNRIRTVVQGSPWTW 248
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L+ L L N+++ + F L L L + N + ++ + +S ++L G
Sbjct: 249 HTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKISNVSLEVVSSWISISTINLAG-- 306
Query: 315 LTNMMGHSMALGDYLHWI 332
N+ S ++ + W+
Sbjct: 307 --NIWDCSSSICPLVSWL 322
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L+LR N L L FA L+ L L L N IS +D+ F+GL L+ L L N++ +
Sbjct: 62 LSLRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQ 121
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+F + L L + N L G F+GL +L L LR + ++
Sbjct: 122 NGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSI 168
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 207 (77.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 53/160 (33%), Positives = 76/160 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CP C CN+ +V C+ L IP L I + L+ N IK + + A Y L+ +D
Sbjct: 272 CPAACTCNNN--IVDCRRKGLTEIPANLPEGIVEIRLEQNMIKNIPAGAFSTYKKLKRID 329
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS NQ+ I F L L L NK++ + F GL SL++L L N + L
Sbjct: 330 LSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLNANKINCLRVN 389
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L A++ L+L N
Sbjct: 390 TFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQN 429
Score = 193 (73.0 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 55/181 (30%), Positives = 86/181 (47%)
Query: 149 KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKS 208
KTV I + + +DL N + I F + L L L +N++S + F GLK
Sbjct: 44 KTVPRGIP--RNAERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQ 101
Query: 209 LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLR 268
L+ + L N L+ LP+ LF + L LDL +N+I + + F G+T ++ L LD N +
Sbjct: 102 LERIRLNRNRLQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHIS 161
Query: 269 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDY 328
+ +F L L L + N T + +FN + +L L L L + H L D+
Sbjct: 162 CIEDGAFRALRDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNL-HCDCHLSWLSDW 220
Query: 329 L 329
L
Sbjct: 221 L 221
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 56/161 (34%), Positives = 78/161 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS--AIQFYSSLQHV 164
CP C C E VV C L IP L L L N I +++ A + +L+ +
Sbjct: 497 CPERCRC--EGTVVDCSNLKLTKIPPHLPEHTTDLRLNDNEISILEATGAFKKLPNLRKI 554
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N+L +I F+ ++EL L NKL SV+ + F GL LK L LR N + + +
Sbjct: 555 NLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDN 614
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F LS + L L NRIS I F L +L + L N
Sbjct: 615 ATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSN 655
Score = 175 (66.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP C C+ ET VV C L +P T+ L L+ N + +V + L +DL
Sbjct: 718 CPESCTCS-ET-VVRCSNRGLRSLPKTIPKDTTELYLEGNLLTSVPKELPNLKQLTLLDL 775
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N + ++ F +L L L++N++ V F GL+SL++L L GN L +P+
Sbjct: 776 SNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTVPEGA 835
Query: 227 FAPLSHLEELDLGQN 241
F L+ L L LG N
Sbjct: 836 FNHLTSLSHLALGAN 850
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 42/128 (32%), Positives = 66/128 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N + NIP F +KL + L+ N++S + F GL+SL L L GN + ++P
Sbjct: 304 IRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIP 363
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L L+ L L N+I+ + F+ L L +L L DN+L+++ F L +
Sbjct: 364 KGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKT 423
Query: 284 LRVGLNVF 291
L + N F
Sbjct: 424 LHLAQNPF 431
Score = 159 (61.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 49/148 (33%), Positives = 75/148 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP P E +L+LN N++S + F L +L+ +NL N L D+
Sbjct: 508 VDCSNLKLTKIPPH--LP-EHTTDLRLNDNEISILEATGAFKKLPNLRKINLSNNKLRDI 564
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + EL L N++ + F+GL L+ L L NQ+ V +F L +
Sbjct: 565 REGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVR 624
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N +T+A GAFN L LS ++L
Sbjct: 625 LLSLYDNRISTIAPGAFNTLHSLSTINL 652
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 42/138 (30%), Positives = 73/138 (52%)
Query: 166 LSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L+ N++ + G F+ L ++ L++NKL + F G + L L GN L+ +
Sbjct: 531 LNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSG 590
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
R+F L L+ L L N+IS +D A F GL+++R+L L DN++ ++ +F L L+ +
Sbjct: 591 RMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTI 650
Query: 285 RVGLNVFTTLADGAFNGL 302
+ N + A+ GL
Sbjct: 651 NLLSNPYVCDCHLAWLGL 668
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 38/103 (36%), Positives = 55/103 (53%)
Query: 187 ELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI 246
EL L N L+SV K LK L +L+L N + L F+ ++ L L L N+I +
Sbjct: 749 ELYLEGNLLTSVP-KELPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCV 807
Query: 247 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
F+GL +LR+L L N L +VP +F +L L+ L +G N
Sbjct: 808 PVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGAN 850
Score = 138 (53.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 43/107 (40%), Positives = 52/107 (48%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K L L GN L +P L L L LDL N IS + F +T L L L NQ
Sbjct: 745 KDTTELYLEGNLLTSVPKEL-PNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQ 803
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+R VP +F L L L + N +T+ +GAFN L LS L L GA
Sbjct: 804 IRCVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLAL-GA 849
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 197 (74.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 62/234 (26%), Positives = 107/234 (45%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSL 161
A A CP +C C+ + V C + L IP ++ + + L L+ N + + + + +L
Sbjct: 18 ALAACPQNCHCHGDLQHVICDKVGLQKIP-KVSETTKLLNLQRNNFPVLAANSFRTMPNL 76
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ L H + + F ++L+ L L+HN + + F L L L L N + +
Sbjct: 77 VSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSE 136
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP L +PL +L L L N+I + F+G LR LYL +N L S+ S + L
Sbjct: 137 LPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENL 196
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM-ALGDYLH--WI 332
A+ + N ++ A + L + L L L ++ ++ + G YL W+
Sbjct: 197 AKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWL 250
Score = 173 (66.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/182 (28%), Positives = 86/182 (47%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P++ L L++ I+ V + A + L ++ LSHN + + F+ +L L L+HNK
Sbjct: 74 PNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNK 133
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+S + L +L +L L N + +L F L L L +N +S + + +
Sbjct: 134 VSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDV 193
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGA 313
L +LD NQL S P+ + L ++ EL++ N ++ D AF GR L L L
Sbjct: 194 ENLAKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNT 253
Query: 314 GL 315
L
Sbjct: 254 NL 255
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 134 LNPSIQRLVLKYNRIKTVD---SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
L+P + +L+ N K + A Q L+ + LS N L ++ + E L + L
Sbjct: 142 LSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHL 201
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS-HLEELDLGQNRISRIDQA 249
+ N+LSS + L+ ++ L L N L+ +PD F +LE L L + + A
Sbjct: 202 DKNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDA 261
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSF 275
F G+T L+ ++LD+N+L +P+ SF
Sbjct: 262 AFSGVTTLKHVHLDNNRLNQLPS-SF 286
>UNIPROTKB|I3LT51 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 GO:GO:0048839 GeneTree:ENSGT00650000092962
EMBL:CU695170 EMBL:CU463987 EMBL:CU466536
Ensembl:ENSSSCT00000029371 OMA:YSTHILM Uniprot:I3LT51
Length = 210
Score = 180 (68.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 56/178 (31%), Positives = 78/178 (43%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+Q L L N I V S SL+H+ L N L IP++ F L + L NK+
Sbjct: 20 SLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKI 79
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + F L SL VL+L N + L + F L LE LDL N + A L+
Sbjct: 80 HHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTA-IRTLS 138
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L N ++S+P +F+ L + N + AF L L L L GA
Sbjct: 139 NLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTLNGA 196
Score = 174 (66.3 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 52/161 (32%), Positives = 79/161 (49%)
Query: 142 VLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNN 200
+L+ N ++ V + A+Q SLQ + L N + +P F L L L+ N L+ +
Sbjct: 1 MLQNNHLRQVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPV 60
Query: 201 KTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRIL 260
+ F L +L+ + L N + +PD F LS L L L NRI + + CF+GL +L L
Sbjct: 61 QAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETL 120
Query: 261 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
L+ N L PT + L L EL N ++ + AF G
Sbjct: 121 DLNYNNLDEFPT-AIRTLSNLKELGFHSNNIKSIPEKAFVG 160
Score = 172 (65.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 51/162 (31%), Positives = 84/162 (51%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L N + + A + S+LQ + L+ N++ +IP F LV L L++N++
Sbjct: 44 SLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRI 103
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S+ K F GL SL+ L+L N L++ P + LS+L+EL N I I + F G
Sbjct: 104 HSLGKKCFDGLHSLETLDLNYNNLDEFPTAI-RTLSNLKELGFHSNNIKSIPEKAFVGNP 162
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLAD 296
+L ++ DN ++ V +F +L L L + G + T D
Sbjct: 163 SLITIHFYDNPIQLVGRSAFQHLPELRTLTLNGASQITEFPD 204
Score = 151 (58.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 36/97 (37%), Positives = 48/97 (49%)
Query: 214 LRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP 273
L+ N L +P L L+ L L N IS + +CF GL +LR L+LDDN L +P
Sbjct: 2 LQNNHLRQVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQ 61
Query: 274 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+F L L + + LN + D AF L L L L
Sbjct: 62 AFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHL 98
>FB|FBgn0034476 [details] [associations]
symbol:Toll-7 "Toll-7" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISS;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0002752 "cell surface pattern recognition
receptor signaling pathway" evidence=IC] [GO:0008329 "pattern
recognition receptor activity" evidence=IC] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0046790 "virion binding"
evidence=IDA] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0010508 "positive regulation of autophagy"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 EMBL:AE013599
GO:GO:0016021 GO:GO:0009897 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0010508 GO:GO:0051607
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0008329
GO:GO:0046790 GO:GO:0002752 GeneTree:ENSGT00700000104442
SUPFAM:SSF52200 FlyBase:FBgn0034476 EMBL:AF247765
RefSeq:NP_523797.1 UniGene:Dm.2660 SMR:Q7KIN0
EnsemblMetazoa:FBtr0086336 GeneID:37272 KEGG:dme:Dmel_CG8595
UCSC:CG8595-RA CTD:37272 InParanoid:Q7KIN0 OMA:NHAFIGR
GenomeRNAi:37272 NextBio:802851 Uniprot:Q7KIN0
Length = 1446
Score = 206 (77.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 65/203 (32%), Positives = 94/203 (46%)
Query: 122 CKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIR-GFE 180
C NL V+ +T N + + + + S LQ +D SHN+L +I G
Sbjct: 210 CPVGNLQVLNLTRNRIRTAEQMGFADMNCGAGSGSAGSELQVLDASHNELRSISESWGIS 269
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
+L L L +N LS ++ + GL SL+++NL N LE LP+ LFA L E+ L Q
Sbjct: 270 RLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQ 329
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRS--VPTPSFIYLGMLAELRVGLNVFTTLADGA 298
N + + + F L L ++ L NQL S V +F L L L + N T +
Sbjct: 330 NELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRT 389
Query: 299 FNGLGRLSALDLRGAGLTNMMGH 321
F L L L+LR N +GH
Sbjct: 390 FKELYFLQILNLRN----NSIGH 408
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 60/199 (30%), Positives = 95/199 (47%)
Query: 119 VVTCKEANLDVIPITL---NPSIQRLVLKYNRIKTVDSAIQFY--SSLQHVDLSHNQLVN 173
+V +L+ +P L + ++ + L+ N + + + F+ L VDLS NQL +
Sbjct: 300 IVNLSNNHLETLPEGLFAGSKELREIHLQQNELYELPKGL-FHRLEQLLVVDLSGNQLTS 358
Query: 174 IPIRG--FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+ F +L+ L L HN L+ ++ +TF L L++LNLR N + + D F PL
Sbjct: 359 NHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLY 418
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
+L L+L +NR+ +D F GL L L L++N + V F L EL + N
Sbjct: 419 NLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQL 478
Query: 292 TTLADGAFNGLGRLSALDL 310
+ A L L LDL
Sbjct: 479 NEVPR-ALQDLAMLRTLDL 496
Score = 187 (70.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 52/147 (35%), Positives = 75/147 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
++L+HN L I R F+ L L L +N + + + F+ L +L LNL N L L
Sbjct: 375 LNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLD 434
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
D+LF L L +L L N IS ++ A F+ + L+ L L NQL VP + L ML
Sbjct: 435 DKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPR-ALQDLAMLRT 493
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L +G N T + +F L +L+ L L
Sbjct: 494 LDLGENQIRTFDNQSFKNLHQLTGLRL 520
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+Q L L+ N I + D+A +L ++L+ N+L + + F L +L LN+N +S
Sbjct: 396 LQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLIS 455
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V F LK L+L N L ++P R L+ L LDLG+N+I D F+ L
Sbjct: 456 VVEPAVFKNCSDLKELDLSSNQLNEVP-RALQDLAMLRTLDLGENQIRTFDNQSFKNLHQ 514
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L L DNQ+ ++ F L L+ L + N ++ G+F+ L A+ L L
Sbjct: 515 LTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLA 574
Query: 317 NMMGHSMALGDYLHWI 332
++ G L L W+
Sbjct: 575 DINGVFATLVSLL-WL 589
Score = 157 (60.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 43/131 (32%), Positives = 67/131 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD Q +P R P + V + L+ N + N FIG K+L+ L + G+ + +
Sbjct: 813 VDCGGQQTTELPRR--VPMDSSV-VYLDGNNFPVLKNHAFIGRKNLRALYVNGSQVAAIQ 869
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+R FA L+ L+ L L N++ + FE L+ALR LYL +NQL ++ + L L
Sbjct: 870 NRTFASLASLQLLHLADNKLRTLHGYEFEQLSALRELYLQNNQLTTIENATLAPLAALEL 929
Query: 284 LRVGLNVFTTL 294
+R+ N TL
Sbjct: 930 IRIDGNRLVTL 940
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 173 NIPI---RGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAP 229
N P+ F ++ L L +N ++++++ N+TF L SL++L+L N L L F
Sbjct: 840 NFPVLKNHAFIGRKNLRALYVNGSQVAAIQNRTFASLASLQLLHLADNKLRTLHGYEFEQ 899
Query: 230 LSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
LS L EL L N+++ I+ A L AL ++ +D N+L ++P
Sbjct: 900 LSALRELYLQNNQLTTIENATLAPLAALELIRIDGNRLVTLP 941
Score = 121 (47.7 bits), Expect = 0.00067, P = 0.00067
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSS 197
++ L L N++ V A+Q + L+ +DL NQ+ + F+ +L L+L N++ +
Sbjct: 468 LKELDLSSNQLNEVPRALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIGN 527
Query: 198 VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL 257
+ F L L VLNL N ++ + F LE + L +N ++ I+ F L +L
Sbjct: 528 ITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADIN-GVFATLVSL 586
Query: 258 RILYLDDNQL 267
L L +N L
Sbjct: 587 LWLNLSENHL 596
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 201 (75.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 58/184 (31%), Positives = 88/184 (47%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I +D +A L+ + LS N++ F P L L L++N+L S+
Sbjct: 90 LYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLG 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
++ F GL+ L L+LR N L +P R+F +LE LDLG NRI + + F G+ L+
Sbjct: 150 SEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L+L+ NQ + F L L L + N + + L LDL G +
Sbjct: 210 LHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFS 269
Query: 320 GHSM 323
G S+
Sbjct: 270 GPSV 273
Score = 191 (72.3 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 64/219 (29%), Positives = 102/219 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C E +V C+ L IP +++ L L+YN ++ + + + + L +
Sbjct: 34 CPKGCRC--EGKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLY 91
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L HN + NI F +L EL L+ N++S N TF + +L+ L+L N L L
Sbjct: 92 LDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSE 151
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L L L N + I F+ L +L L N++RS+ F + L EL
Sbjct: 152 QFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELH 211
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
+ N F+ L F L L L L+ ++ ++G +M+
Sbjct: 212 LEHNQFSKLNLALFPRLVSLQNLYLQWNKIS-VIGQTMS 249
>MGI|MGI:2389177 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:1902004 "positive regulation of
beta-amyloid formation" evidence=ISO;IMP] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2389177 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:347731 OMA:PCTYSKS OrthoDB:EOG45TCMT
EMBL:AY182029 EMBL:AK032485 EMBL:AK035773 EMBL:AK035858
EMBL:AK035882 EMBL:AK036366 EMBL:AK163753 EMBL:BC113178
EMBL:BC113784 IPI:IPI00266935 IPI:IPI00607982 RefSeq:NP_848793.1
UniGene:Mm.431318 ProteinModelPortal:Q8BZ81 SMR:Q8BZ81
STRING:Q8BZ81 PhosphoSite:Q8BZ81 PaxDb:Q8BZ81 PRIDE:Q8BZ81
Ensembl:ENSMUST00000105439 GeneID:216028 KEGG:mmu:216028
UCSC:uc007fkk.1 UCSC:uc007fkl.1 InParanoid:Q14CH3 NextBio:374957
Bgee:Q8BZ81 CleanEx:MM_LRRTM3 Genevestigator:Q8BZ81
GermOnline:ENSMUSG00000042846 Uniprot:Q8BZ81
Length = 582
Score = 201 (75.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 58/184 (31%), Positives = 88/184 (47%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I +D +A L+ + LS N++ F P L L L++N+L S+
Sbjct: 90 LYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLG 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
++ F GL+ L L+LR N L +P R+F +LE LDLG NRI + + F G+ L+
Sbjct: 150 SEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L+L+ NQ + F L L L + N + + L LDL G +
Sbjct: 210 LHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFS 269
Query: 320 GHSM 323
G S+
Sbjct: 270 GPSV 273
Score = 189 (71.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 63/219 (28%), Positives = 102/219 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C E +V C+ L IP +++ L L+YN ++ + + + + L +
Sbjct: 34 CPKGCRC--EGKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLY 91
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L HN + NI F +L EL L+ N++S N TF + +L+ L+L N L L
Sbjct: 92 LDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSE 151
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L L L N + I F+ L +L L N++RS+ F + L EL
Sbjct: 152 QFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELH 211
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
+ N F+ L F L L L ++ ++ ++G +M+
Sbjct: 212 LEHNQFSKLNLALFPRLVSLQNLYMQWNKIS-VIGQTMS 249
>RGD|1304866 [details] [associations]
symbol:Lrrtm3 "leucine rich repeat transmembrane neuronal 3"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1304866 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:CH473988 CTD:347731
OrthoDB:EOG45TCMT IPI:IPI00869756 RefSeq:NP_001099857.1
UniGene:Rn.214114 Ensembl:ENSRNOT00000033980 GeneID:294380
KEGG:rno:294380 UCSC:RGD:1304866 NextBio:638086 Uniprot:D3ZAL8
Length = 582
Score = 201 (75.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 58/184 (31%), Positives = 88/184 (47%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I +D +A L+ + LS N++ F P L L L++N+L S+
Sbjct: 90 LYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLG 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
++ F GL+ L L+LR N L +P R+F +LE LDLG NRI + + F G+ L+
Sbjct: 150 SEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKE 209
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L+L+ NQ + F L L L + N + + L LDL G +
Sbjct: 210 LHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFS 269
Query: 320 GHSM 323
G S+
Sbjct: 270 GPSV 273
Score = 189 (71.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 63/219 (28%), Positives = 102/219 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C E +V C+ L IP +++ L L+YN ++ + + + + L +
Sbjct: 34 CPKGCRC--EGKMVYCESQKLQEIPSSISAGCLGLSLRYNSLQKLKYNQFKGLNQLTWLY 91
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L HN + NI F +L EL L+ N++S N TF + +L+ L+L N L L
Sbjct: 92 LDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSE 151
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L L L N + I F+ L +L L N++RS+ F + L EL
Sbjct: 152 QFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELH 211
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
+ N F+ L F L L L ++ ++ ++G +M+
Sbjct: 212 LEHNQFSKLNLALFPRLVSLQNLYMQWNKIS-VIGQTMS 249
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 196 (74.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 62/234 (26%), Positives = 107/234 (45%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSL 161
A A CP +C C+ + V C + L IP ++ + + L L+ N + + + + +L
Sbjct: 18 ALAACPQNCHCHGDLQHVICDKVGLQKIP-KVSETTKLLNLQRNNFPVLAANSFRTVPNL 76
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ L H + + F ++L+ L L+HN + + F L L L L N + +
Sbjct: 77 VSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSE 136
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP L +PL +L L L N+I + F+G LR LYL +N L S+ S + L
Sbjct: 137 LPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENL 196
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM-ALGDYLH--WI 332
A+ + N ++ A + L + L L L ++ ++ + G YL W+
Sbjct: 197 AKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWL 250
Score = 168 (64.2 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 51/182 (28%), Positives = 86/182 (47%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P++ L L++ I+ V + A + L ++ LSHN + + F+ +L L L+HNK
Sbjct: 74 PNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNK 133
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+S + L +L +L L N + +L F L L L +N ++ + + +
Sbjct: 134 VSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDV 193
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGA 313
L +LD NQL S P+ + L ++ EL++ N ++ D AF GR L L L
Sbjct: 194 ENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNT 253
Query: 314 GL 315
L
Sbjct: 254 NL 255
Score = 151 (58.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 134 LNPSIQRLVLKYNRIKTVD---SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
L+P + +L+ N K + A Q L+ + LS N L ++ + E L + L
Sbjct: 142 LSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENLAKFHL 201
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS-HLEELDLGQNRISRIDQA 249
+ N+LSS + L+ ++ L L N L+ +PD F +LE L L + + A
Sbjct: 202 DRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDA 261
Query: 250 CFEGLTALRILYLDDNQLRSVPT 272
F G+T L+ ++L++N+L +P+
Sbjct: 262 AFAGVTTLKHVHLENNRLNQLPS 284
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 204 (76.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 57/173 (32%), Positives = 88/173 (50%)
Query: 141 LVLKYNR--IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
LVLK NR I + + LQH++L+ N++ N+ F+ L L++ N ++ +
Sbjct: 195 LVLKLNRNRISAIPPKMFKLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKL 254
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
+ F GL ++++L L N L ++ L L+EL L QN I+RI +E L
Sbjct: 255 MDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLS 314
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L L N L + SF+ L +L L +G N + +AD AF GL L LDL+
Sbjct: 315 ELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLK 367
Score = 203 (76.5 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C + L C L +P L + RL L +NR+ + S++ SL+ V
Sbjct: 47 CPTTCRCLGDLL--DCSRKRLARLPEPLPSWVARLDLSHNRLSFIKASSMSHLQSLREVK 104
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L++N+L IP G + L L N++ + + +SL+ L+L N + +L
Sbjct: 105 LNNNELETIPNLG-PVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNNISELQTA 163
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLT-ALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
P L+ L L NR++ ++ F+ L L +L L+ N++ ++P P L L L
Sbjct: 164 F--PALQLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIP-PKMFKLPQLQHL 220
Query: 285 RVGLNVFTTLADG-AFNGLGRLSALDLRGAGLTNMM 319
+ N + DG F GLG L +L ++ G+T +M
Sbjct: 221 ELNRNKIKNV-DGLTFQGLGALKSLKMQRNGVTKLM 255
Score = 193 (73.0 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 58/183 (31%), Positives = 90/183 (49%)
Query: 137 SIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L +N + + + LQ + LS N + I +E +KL EL L N L
Sbjct: 264 NMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHL 323
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS-RIDQ--ACFE 252
S +++ +F+GL L L++ N + + D F LS L+ LDL N IS I+ F
Sbjct: 324 SRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFS 383
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
GL LR L L N++RS+ +F L L L + N +L AF+ + +L L L
Sbjct: 384 GLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNT 443
Query: 313 AGL 315
+ L
Sbjct: 444 SSL 446
Score = 176 (67.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 56/206 (27%), Positives = 99/206 (48%)
Query: 123 KEANLDVIPITLNPSIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEP 181
K N+D + +++ L ++ N + K +D A S+++ + L HN L I
Sbjct: 226 KIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYG 285
Query: 182 QEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
L EL L+ N ++ ++ + + L L+L N L L D F LS L L +G N
Sbjct: 286 LLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNN 345
Query: 242 RISRIDQACFEGLTALRILYLDDNQLR-SVPTPSFIYLGM--LAELRVGLNVFTTLADGA 298
R+S I F GL++L+ L L +N++ ++ + + G+ L L + N ++ A
Sbjct: 346 RVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKA 405
Query: 299 FNGLGRLSALDLRGAGLTNMMGHSMA 324
F GL L LDL + ++ G++ +
Sbjct: 406 FTGLDALEHLDLSDNAIMSLQGNAFS 431
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 55/183 (30%), Positives = 92/183 (50%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S++ + L N ++T+ + +++ + L+ N++V I + + L L L+ N +S
Sbjct: 99 SLREVKLNNNELETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNNIS 158
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSH-LEELDLGQNRISRIDQACFEGLT 255
+ F L+ LK L L N + + F L++ L L L +NRIS I F+ L
Sbjct: 159 ELQT-AFPALQ-LKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFK-LP 215
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L+ L L+ N++++V +F LG L L++ N T L DGAF GL + L L L
Sbjct: 216 QLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNL 275
Query: 316 TNM 318
T +
Sbjct: 276 TEI 278
>UNIPROTKB|E7EW58 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886
InterPro:IPR003591 SMART:SM00369 GO:GO:0001934 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 HGNC:HGNC:17200
EMBL:AC004142 IPI:IPI00924926 ProteinModelPortal:E7EW58 SMR:E7EW58
Ensembl:ENST00000421101 ArrayExpress:E7EW58 Bgee:E7EW58
Uniprot:E7EW58
Length = 273
Score = 189 (71.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 55/194 (28%), Positives = 91/194 (46%)
Query: 116 ETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIP 175
E V C + L P L + Q L+L+ N I ++ + F +L +DLS N L ++
Sbjct: 49 EASTVDCNDLGLLTFPARLPANTQILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSSVT 108
Query: 176 IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEE 235
+ +L+ + L NKL+ + K L +L+ L + N L + F L +L
Sbjct: 109 NINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLR 168
Query: 236 LDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTL 294
L L NR+ I+ F+ L L IL + +N + + +F L L L + G+N+ T +
Sbjct: 169 LHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINL-TEI 227
Query: 295 ADGAFNGLGRLSAL 308
D A GL L ++
Sbjct: 228 PDNALVGLENLESI 241
Score = 164 (62.8 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 52/171 (30%), Positives = 80/171 (46%)
Query: 141 LVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N + +V + ++ L V L N+L +P + L EL +NHN LS+++
Sbjct: 97 LDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTIS 156
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
FIGL +L L+L N L+ + + F L +LE L +G+N I RI F+ L LR
Sbjct: 157 PGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRS 216
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + L +P + + L L + N + A + L LDL
Sbjct: 217 LVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDL 267
Score = 157 (60.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 45/139 (32%), Positives = 70/139 (50%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L L L+ N LSSV N + L + L N L +LP++ + LS+L+EL + N +S
Sbjct: 94 LTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLS 153
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
I F GL L L+L+ N+L+ + + F L L L +G N + D F L
Sbjct: 154 TISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLIN 213
Query: 305 LSALDLRGAGLTNMMGHSM 323
L +L + G LT + +++
Sbjct: 214 LRSLVIAGINLTEIPDNAL 232
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 36/156 (23%), Positives = 72/156 (46%)
Query: 116 ETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQL 171
+ L V +E L +P ++ ++Q L + +N + T+ A +L + L+ N+L
Sbjct: 117 QLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRL 176
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
I + F+ L L + N + + + F L +L+ L + G L ++PD L
Sbjct: 177 QMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLE 236
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
+LE + NR+ ++ + + L+ L L+ N +
Sbjct: 237 NLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNPI 272
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 210 KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS 269
++L L+ N + + P++ L LDL QN +S + + + L +YL++N+L
Sbjct: 72 QILLLQTNNIAKIEYSTDFPVN-LTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTE 130
Query: 270 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+P L L EL + N+ +T++ GAF GL L L L
Sbjct: 131 LPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHL 171
>RGD|1598149 [details] [associations]
symbol:Vasn "vasorin" species:10116 "Rattus norvegicus"
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0071456 "cellular response to hypoxia"
evidence=ISO] [GO:0071461 "cellular response to redox state"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 SMART:SM00181 RGD:1598149
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104056
CTD:114990 OMA:VTQLRPN OrthoDB:EOG4GTKD4 EMBL:CH474017
IPI:IPI00204993 RefSeq:NP_001102852.1 UniGene:Rn.198255
Ensembl:ENSRNOT00000005490 GeneID:679921 KEGG:rno:679921
UCSC:RGD:1598149 NextBio:717547 Uniprot:D3ZAE6
Length = 673
Score = 201 (75.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 69/220 (31%), Positives = 102/220 (46%)
Query: 107 CPPDCDCND-ETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHV 164
CP C CN +T+ T ++ +P + P L + N I T+D + LQ +
Sbjct: 25 CPSGCQCNQPQTVFCTARQGT--TVPRDVPPDTVGLYIFENGITTLDVGCFAGFPGLQLL 82
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS NQ+ ++P F+P L L L NKL ++N+TF GL+ L+ L L N + +
Sbjct: 83 DLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRLERLYLGKNRIRHIQP 142
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT--PSFIYLGMLA 282
F L HL EL L N + R+ L R+L LD + S+P + +
Sbjct: 143 GAFDALDHLLELKLPDNEL-RV----LPPLHLPRLLLLDLSH-NSIPALEAGILDTANVE 196
Query: 283 ELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
LR+ GL + L +G F L L LD+ N +GH
Sbjct: 197 ALRLAGLGL-RQLDEGLFGRLRNLHDLDVSD----NQLGH 231
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/170 (31%), Positives = 80/170 (47%)
Query: 141 LVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNN 200
LVL + +++ S Q + Q V + Q +P R P V L + N +++++
Sbjct: 15 LVLLGSGVQSCPSGCQC-NQPQTVFCTARQGTTVP-RDVPPDT--VGLYIFENGITTLDV 70
Query: 201 KTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRIL 260
F G L++L+L N + LP +F PL +L LDL N++ I F GL L L
Sbjct: 71 GCFAGFPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRLERL 130
Query: 261 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
YL N++R + +F L L EL++ N L L RL LDL
Sbjct: 131 YLGKNRIRHIQPGAFDALDHLLELKLPDNELRVLPP---LHLPRLLLLDL 177
>UNIPROTKB|I3LDA4 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0020037 "heme binding" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0004601
"peroxidase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006979 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10
GeneTree:ENSGT00550000074325 CTD:7837 OMA:EPVITWN EMBL:FP102546
EMBL:FP565715 RefSeq:XP_003125453.3 Ensembl:ENSSSCT00000022979
GeneID:100516076 KEGG:ssc:100516076 Uniprot:I3LDA4
Length = 1479
Score = 205 (77.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 57/163 (34%), Positives = 83/163 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C T V C L+ +P + P L L++NRI+ + A + +L +
Sbjct: 36 CPSRCLCFRTT--VRCMHLLLEAVP-AVAPQTSILDLRFNRIREIQPGAFKGLRNLNTLL 92
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L++NQ+ +IP FE E L L L N++ S++ + F GL SL+ L L N +E L
Sbjct: 93 LNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSIDRQAFQGLASLEQLYLHFNQIETLDPE 152
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLR 268
F L LE L L NRI+ + F L +++ L LD N LR
Sbjct: 153 SFQHLPKLERLFLHNNRITYLVPGTFNHLESMKRLRLDSNALR 195
Score = 174 (66.3 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 44/130 (33%), Positives = 68/130 (52%)
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
PQ +++L+ N ++ + F GL++L L L N ++ +P F L +L+ L L +
Sbjct: 62 PQTSILDLRFN--RIREIQPGAFKGLRNLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYK 119
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
N I ID+ F+GL +L LYL NQ+ ++ SF +L L L + N T L G FN
Sbjct: 120 NEIQSIDRQAFQGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITYLVPGTFN 179
Query: 301 GLGRLSALDL 310
L + L L
Sbjct: 180 HLESMKRLRL 189
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 38/126 (30%), Positives = 68/126 (53%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ I F+ L L LN+N++ S+ + +F L++LK L L N ++ +
Sbjct: 67 LDLRFNRIREIQPGAFKGLRNLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSID 126
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L+ LE+L L N+I +D F+ L L L+L +N++ + +F +L +
Sbjct: 127 RQAFQGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITYLVPGTFNHLESMKR 186
Query: 284 LRVGLN 289
LR+ N
Sbjct: 187 LRLDSN 192
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 34/109 (31%), Positives = 54/109 (49%)
Query: 211 VLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSV 270
+L+LR N + ++ F L +L L L N+I I FE L L+ LYL N+++S+
Sbjct: 66 ILDLRFNRIREIQPGAFKGLRNLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSI 125
Query: 271 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
+F L L +L + N TL +F L +L L L +T ++
Sbjct: 126 DRQAFQGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITYLV 174
>UNIPROTKB|F1RSS8 [details] [associations]
symbol:LOC100623179 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00650000093266
OMA:KILCCAD EMBL:CU463217 ProteinModelPortal:F1RSS8
Ensembl:ENSSSCT00000010231 Uniprot:F1RSS8
Length = 588
Score = 200 (75.5 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 54/169 (31%), Positives = 86/169 (50%)
Query: 143 LKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L++NRI+ + F +LQ + L+HN + + F +L L L+ N ++ ++ +
Sbjct: 2 LQHNRIRHISRKAFFGLHNLQILYLNHNCITTLSPGVFRDLHRLTWLILDDNPITRISQR 61
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
F GL SL L++ N+LE LP ++ A + HL LDL N I + + F +L +L+
Sbjct: 62 LFAGLNSLFFLSMVNNYLEALPRQMCANMPHLNWLDLEGNGIKHLTNSTFLSCGSLTVLF 121
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L NQ+ VP +F L L EL + N+ L F L L L+L
Sbjct: 122 LPRNQIDIVPEKTFSSLKNLGELDLSSNLIMELPPHIFKDLKLLQKLNL 170
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 47/175 (26%), Positives = 76/175 (43%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L +N I T+ + + L + L N + I R F L L + +N L
Sbjct: 20 NLQILYLNHNCITTLSPGVFRDLHRLTWLILDDNPITRISQRLFAGLNSLFFLSMVNNYL 79
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + + L L+L GN ++ L + F L L L +N+I + + F L
Sbjct: 80 EALPRQMCANMPHLNWLDLEGNGIKHLTNSTFLSCGSLTVLFLPRNQIDIVPEKTFSSLK 139
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L L N + +P F L +L +L + N L F L +L +LDL
Sbjct: 140 NLGELDLSSNLIMELPPHIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDL 194
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L +DL N + ++ F L L L N++ V KTF LK+L L+L N +
Sbjct: 93 LNWLDLEGNGIKHLTNSTFLSCGSLTVLFLPRNQIDIVPEKTFSSLKNLGELDLSSNLIM 152
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
+LP +F L L++L+L N + + + FE L L+ L L+ ++ S+ T F
Sbjct: 153 ELPPHIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIEIASISTRMF 207
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 200 (75.5 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 59/205 (28%), Positives = 94/205 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVD 165
CP C+C +T V C L +P + + L L NRI+ ++ + +L+ +D
Sbjct: 25 CPARCECTVQTRAVACTRRRLTAVPDGIPAETRLLELSRNRIRCLNPGDLAALPALEELD 84
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS N + ++ F +L L+L N+L + F L +L +L+L N L L D
Sbjct: 85 LSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDY 144
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L L++G N + + + F GL AL L L+ L ++ S +L L LR
Sbjct: 145 TFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLRSLGALR 204
Query: 286 VGLNVFTTLADGAFNGLGRLSALDL 310
+ +L D F L L L++
Sbjct: 205 LRHLAIASLEDQNFRRLPGLLHLEI 229
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 53/172 (30%), Positives = 82/172 (47%)
Query: 147 RIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGL 206
R+ V I + L ++LS N++ + L EL L+ N ++ V F L
Sbjct: 44 RLTAVPDGIPAETRL--LELSRNRIRCLNPGDLAALPALEELDLSENAIAHVEPGAFANL 101
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
L+VL LRGN L+ +P +F L +L LDL +N++ + F+ L +LR L + DN
Sbjct: 102 PRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDND 161
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L V +F L L EL + T L+ + L L AL LR + ++
Sbjct: 162 LVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLRSLGALRLRHLAIASL 213
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 47/160 (29%), Positives = 73/160 (45%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V + +L +P G + +L+EL + N++ +N L +L+ L+L N + +
Sbjct: 38 VACTRRRLTAVP-DGIPAETRLLEL--SRNRIRCLNPGDLAALPALEELDLSENAIAHVE 94
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
FA L L L L N++ I F L L +L L +N+L + +F L L
Sbjct: 95 PGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRR 154
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
L VG N ++ AF GL L L L LT + G S+
Sbjct: 155 LEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESL 194
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 59/217 (27%), Positives = 92/217 (42%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEAN-LDVIP---ITLNPSIQRLVLKYNRIKTV-DSAIQF 157
A A P N L V N L +IP T ++ L L N++ + D Q
Sbjct: 89 AIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQD 148
Query: 158 YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGN 217
SL+ +++ N LV + R F L EL L L++++ ++ L+SL L LR
Sbjct: 149 LHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLRSLGALRLRHL 208
Query: 218 FLEDLPDRLFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 276
+ L D+ F L L L++ + + GL L L + + +VP +
Sbjct: 209 AIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLN-LTSLSVTHTNITAVPAAALR 267
Query: 277 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+ L L + N +T+ G+F L RL L L GA
Sbjct: 268 HQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGA 304
Score = 127 (49.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/108 (27%), Positives = 53/108 (49%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
+L + ++H + +P Q L L L+HN +S+V +F L L+ L+L G L
Sbjct: 247 NLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALL 306
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
+ + F L + L+L N +S ++++ F + L L +D N L
Sbjct: 307 AVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPL 354
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 31/109 (28%), Positives = 57/109 (52%)
Query: 137 SIQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L + + I V +A ++ + L ++LSHN + +P F +L EL L L
Sbjct: 247 NLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALL 306
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
+ V + F+GL+ +++LNL N L L + F ++ LE L + N ++
Sbjct: 307 AVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLA 355
>UNIPROTKB|F1NVW6 [details] [associations]
symbol:F1NVW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0031362 "anchored to external side of plasma
membrane" evidence=IEA] [GO:0042730 "fibrinolysis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR003591
SMART:SM00369 GO:GO:0007155 InterPro:IPR000372 SMART:SM00013
GO:GO:0031362 GeneTree:ENSGT00690000102197 EMBL:AADN02063514
EMBL:AADN02063515 IPI:IPI00571680 ProteinModelPortal:F1NVW6
Ensembl:ENSGALT00000035204 OMA:LTENPWH Uniprot:F1NVW6
Length = 225
Score = 178 (67.7 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 62/194 (31%), Positives = 88/194 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVD 165
CP C+ T V C +L +P L + L+L NR+ +V +A Q ++LQ +D
Sbjct: 2 CPSRDGCSCPT--VNCTGRDLSAVPAGLPENTGILLLNANRLLSVSTAAFQKLAALQDLD 59
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS N L + P K EL L+HN L ++ GL +L L L N L+ L
Sbjct: 60 LSDNGLQAVLTEAALPSLK--ELLLSHNALEAL--PALQGLPALTRLALAHNKLQALAPA 115
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F + L++LDL N + + + F GL L+ L L DN L +P L L L
Sbjct: 116 AFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRGLLQDLVTLETLW 175
Query: 286 VGLNVFTTLADGAF 299
+ N L G F
Sbjct: 176 LSGNRLRALPSGFF 189
Score = 156 (60.0 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 48/156 (30%), Positives = 75/156 (48%)
Query: 110 DCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHN 169
D D +D L EA L PS++ L+L +N ++ + A+Q +L + L+HN
Sbjct: 57 DLDLSDNGLQAVLTEAAL--------PSLKELLLSHNALEALP-ALQGLPALTRLALAHN 107
Query: 170 QLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAP 229
+L + F +L +L L N L ++ F+GL+ LK L+L N LE+LP L
Sbjct: 108 KLQALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRGLLQD 167
Query: 230 LSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
L LE L L NR+ + F ++L +N
Sbjct: 168 LVTLETLWLSGNRLRALPSGFFPEGHLFAYVFLTEN 203
Score = 126 (49.4 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 44/131 (33%), Positives = 65/131 (49%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L LN N+L SV+ F L +L+ L+L N L+ + A L L+EL L N + +
Sbjct: 34 LLLNANRLLSVSTAAFQKLAALQDLDLSDNGLQAVLTE--AALPSLKELLLSHNALEALP 91
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+GL AL L L N+L+++ +F + L +L + N TL + AF GL L
Sbjct: 92 --ALQGLPALTRLALAHNKLQALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKD 149
Query: 308 LDLRGAGLTNM 318
LDL L +
Sbjct: 150 LDLSDNALEEL 160
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 204 (76.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L V+P + + L L N V + Y L +DL
Sbjct: 534 CPTECTCLDT--VVRCSNKGLKVLPKGIPRDVTELYLDGNHFTLVPKELYNYKHLTLIDL 591
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 592 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 651
Query: 227 FAPLSHLEELDLGQN 241
F+ LS L L +G N
Sbjct: 652 FSDLSALSHLAIGAN 666
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C++ +V C+ L IP L +I + L+ N IK + A Y L+ +D
Sbjct: 80 CPAACTCSNN--IVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 137
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQ+ + F+ L L L NK++ + F GL SL++L L N + L
Sbjct: 138 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 197
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L A++ ++L N
Sbjct: 198 AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 237
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 53/167 (31%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP PQ EL+LN+N+ + + F L L+ +N N + D+
Sbjct: 324 VDCSNQKLTKIP--DHIPQYT-AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 380
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + + E+ L NR+ + F+GL +L+ L L N++ V SFI L +
Sbjct: 381 EEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVR 440
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N T+A GAF+ L LS L+L A N + LG++L
Sbjct: 441 LLSLYDNQIATIAPGAFDTLHSLSTLNLL-ANPFNCNCYLAWLGEWL 486
Score = 166 (63.5 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 50/162 (30%), Positives = 75/162 (46%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--S 160
A CP C C T V C L IP + L L N +++ F
Sbjct: 309 ADLACPEKCRCEGTT--VDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQ 366
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++ S+N++ +I FE + E+ L N+L +V +K F GL+SLK L LR N +
Sbjct: 367 LRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 426
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F LS + L L N+I+ I F+ L +L L L
Sbjct: 427 CVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNL 468
Score = 165 (63.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 42/132 (31%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + IP F P +KL + L++N++S + F GL+SL L L GN +
Sbjct: 108 TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 167
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+LP LF L L+ L L N+I+ + F+ L L +L L DN+L+++ +F L
Sbjct: 168 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 227
Query: 280 MLAELRVGLNVF 291
+ + + N F
Sbjct: 228 AIQTMHLAQNPF 239
Score = 147 (56.8 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 149 KTVDSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLK 207
K D Q+ + L+ L++N+ + G F+ +L ++ ++NK++ + F G
Sbjct: 333 KIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAA 389
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
+ + L N LE++ ++F L L+ L L NRIS + F GL+++R+L L DNQ+
Sbjct: 390 GVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQI 449
Query: 268 RSVPTPSFIYLGMLAELRVGLNVF 291
++ +F L L+ L + N F
Sbjct: 450 ATIAPGAFDTLHSLSTLNLLANPF 473
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E + E++L N + + F K L+ ++L N + +L
Sbjct: 91 VDCRGKGLTEIPTN--LP-ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELA 147
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + ++ FEGL +L++L L+ N++ + +F L L
Sbjct: 148 PDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 207
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL-RGAGLTNMMGHSMALGDYLH 330
L + N T+A G F+ L + + L + + + H L DYLH
Sbjct: 208 LSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC--HLKWLADYLH 253
Score = 129 (50.5 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 39/126 (30%), Positives = 66/126 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L+ N + V + + K L +++L N + L
Sbjct: 545 VRCSNKGLKVLP-KGI-PRD-VTELYLDGNHFTLVPKELY-NYKHLTLIDLSNNRISTLS 600
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
++ F+ ++ L L L NR+ I F+GL +LR+L L N + VP +F L L+
Sbjct: 601 NQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSH 660
Query: 284 LRVGLN 289
L +G N
Sbjct: 661 LAIGAN 666
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 37/102 (36%), Positives = 51/102 (50%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L L GN +P L+ HL +DL NRIS + F +T L L L N+LR +P
Sbjct: 566 LYLDGNHFTLVPKELYN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 624
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+F L L L + N + + +GAF+ L LS L + GA
Sbjct: 625 PRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAI-GA 665
>UNIPROTKB|F1NR94 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250 EMBL:AADN02015251
EMBL:AADN02015252 EMBL:AADN02015253 EMBL:AADN02015254
EMBL:AADN02015255 EMBL:AADN02015256 EMBL:AADN02015257
EMBL:AADN02015258 EMBL:AADN02015259 EMBL:AADN02015260
EMBL:AADN02015261 EMBL:AADN02015262 EMBL:AADN02015263
EMBL:AADN02015264 EMBL:AADN02015265 EMBL:AADN02015266
EMBL:AADN02015267 EMBL:AADN02015268 EMBL:AADN02015269
EMBL:AADN02015270 EMBL:AADN02015271 IPI:IPI00594561
Ensembl:ENSGALT00000037314 ArrayExpress:F1NR94 Uniprot:F1NR94
Length = 666
Score = 200 (75.5 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 45/135 (33%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L +P + + L L N+ V + Y L +DL
Sbjct: 68 CPAECTCLDT--VVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 125
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 126 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGA 185
Query: 227 FAPLSHLEELDLGQN 241
F LS L L +G N
Sbjct: 186 FNDLSALSHLAIGAN 200
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 39/107 (36%), Positives = 53/107 (49%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN +P L + HL +DL NRIS + F +T L L L N+
Sbjct: 95 KDVTELYLDGNQFTLVPKEL-SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 153
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
LR +P +F L L L + N + + +GAFN L LS L + GA
Sbjct: 154 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI-GA 199
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L+ N+ + V K K L +++L N + L
Sbjct: 79 VRCSNKGLKALP-KGI-PKD-VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLS 134
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
++ F+ ++ L L L NR+ I F+GL +LR+L L N + VP +F L L+
Sbjct: 135 NQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSH 194
Query: 284 LRVGLN 289
L +G N
Sbjct: 195 LAIGAN 200
>MGI|MGI:1916925 [details] [associations]
symbol:Pxdn "peroxidasin homolog (Drosophila)" species:10090
"Mus musculus" [GO:0004601 "peroxidase activity" evidence=ISO]
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0020037 "heme binding" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO;IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
MGI:MGI:1916925 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
HSSP:P21809 GO:GO:0005201 Gene3D:1.10.640.10 eggNOG:NOG262194
GeneTree:ENSGT00550000074325 HOGENOM:HOG000016084
HOVERGEN:HBG108312 CTD:7837 OMA:EPVITWN OrthoDB:EOG4J1179
EMBL:AK142872 EMBL:AC159626 EMBL:AC165078 EMBL:BC112913
IPI:IPI00461384 RefSeq:NP_852060.2 UniGene:Mm.251774
ProteinModelPortal:Q3UQ28 SMR:Q3UQ28 PhosphoSite:Q3UQ28
PaxDb:Q3UQ28 PRIDE:Q3UQ28 Ensembl:ENSMUST00000122328 GeneID:69675
KEGG:mmu:69675 UCSC:uc007ngl.2 InParanoid:Q3UQ28 NextBio:330062
Bgee:Q3UQ28 CleanEx:MM_PXDN Genevestigator:Q3UQ28 Uniprot:Q3UQ28
Length = 1475
Score = 204 (76.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 58/164 (35%), Positives = 82/164 (50%)
Query: 105 AFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQH 163
A CP C C T V C L+ +P + P L L++NRI+ + A + SL
Sbjct: 31 AGCPSRCLCFRTT--VRCMHLLLEAVP-AVAPQTSILDLRFNRIREIQPGAFRRLRSLNT 87
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L++NQ+ IP FE E L L L N++ S++ + F GL SL+ L L N +E L
Sbjct: 88 LLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLD 147
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
F L LE L L NRI+ + F L +++ L LD N L
Sbjct: 148 PESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKRLRLDSNAL 191
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/130 (33%), Positives = 68/130 (52%)
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
PQ +++L+ N ++ + F L+SL L L N ++ +P+ F L +L+ L L +
Sbjct: 59 PQTSILDLRFN--RIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYK 116
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
N I ID+ F+GL +L LYL NQ+ ++ SF +L L L + N T L G F+
Sbjct: 117 NEIQSIDRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFS 176
Query: 301 GLGRLSALDL 310
L + L L
Sbjct: 177 QLESMKRLRL 186
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ I F L L LN+N++ + N F L++LK L L N ++ +
Sbjct: 64 LDLRFNRIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSID 123
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L+ LE+L L N+I +D F+ L L L+L +N++ + +F L +
Sbjct: 124 RQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKR 183
Query: 284 LRVGLN 289
LR+ N
Sbjct: 184 LRLDSN 189
Score = 129 (50.5 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 211 VLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSV 270
+L+LR N + ++ F L L L L N+I +I FE L L+ LYL N+++S+
Sbjct: 63 ILDLRFNRIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSI 122
Query: 271 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
+F L L +L + N TL +F L +L L L +T+++
Sbjct: 123 DRQAFKGLASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLV 171
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 204 (76.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L V+P + + L L N+ V + Y L +DL
Sbjct: 719 CPSECTCLDT--VVRCSNKGLKVLPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 776
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 777 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 836
Query: 227 FAPLSHLEELDLGQN 241
F LS L L +G N
Sbjct: 837 FNDLSALSHLAIGAN 851
Score = 187 (70.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 53/186 (28%), Positives = 87/186 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV-- 164
CP C C+ T V C L +P + + +RL L N I + + I F + L+H+
Sbjct: 28 CPAQCSCSGST--VDCHGLALRSVPRNIPRNTERLDLNGNNITRI-TKIDF-AGLRHLRV 83
Query: 165 -DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L N++ I F+ ++L L+LN N L F+G L L+L N ++ +P
Sbjct: 84 LQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIP 143
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F ++ L L N+IS I+ F L L +L L++N + + SF ++ L
Sbjct: 144 RKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 203
Query: 284 LRVGLN 289
R+ N
Sbjct: 204 FRLHSN 209
Score = 186 (70.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 48/160 (30%), Positives = 78/160 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C++ +V C+ L IP L +I + L+ N I+ + A Y L+ +D
Sbjct: 273 CPAACTCSNN--IVDCRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLD 330
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQ+ + F+ L L L NK++ + F GL SL++L L N + L
Sbjct: 331 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 390
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ + + F L A++ ++L N
Sbjct: 391 AFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLAQN 430
Score = 186 (70.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 57/167 (34%), Positives = 85/167 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP PQ EL+LN+N+ + + F L L+ +N N + D+
Sbjct: 509 VDCSNQRLNKIP--DHIPQYT-AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 565
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F S + E+ L NR+ + F+GL +L+ L L N++ V SFI LG +
Sbjct: 566 EEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVR 625
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+A GAF+ L LS L+L A N H LG++L
Sbjct: 626 LLSLYDNQITTVAPGAFDSLHSLSTLNLL-ANPFNCNCHLAWLGEWL 671
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 48/154 (31%), Positives = 73/154 (47%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL+ N + I F L LQL N++S++ F LK L+ L L N L+
Sbjct: 58 ERLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQL 117
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
P+ LF + L LDL +N+I I + F G ++ L LD NQ+ + +F L L
Sbjct: 118 FPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDL 177
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L + N T L+ +FN + +L L L
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 44/132 (33%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + IP F P +KL L L++N++S + F GL+SL L L GN +
Sbjct: 301 TITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 360
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+LP LF L L+ L L N+I+ + F+ L L +L L DN+L++V +F L
Sbjct: 361 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALR 420
Query: 280 MLAELRVGLNVF 291
+ + + N F
Sbjct: 421 AIQTMHLAQNPF 432
Score = 166 (63.5 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--S 160
A CP C C T V C L+ IP + L L N +++ F
Sbjct: 494 ADLACPEKCRCEGTT--VDCSNQRLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQ 551
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++ S+N++ +I FE + E+ L N+L +V +K F GL+SLK L LR N +
Sbjct: 552 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 611
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F L + L L N+I+ + F+ L +L L L
Sbjct: 612 CVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNL 653
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 51/186 (27%), Positives = 83/186 (44%)
Query: 133 TLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
TL+ S+ ++ N++ Q S VD L ++P R P+ L LN
Sbjct: 8 TLSLSLGLVLSILNKVAPQACPAQCSCSGSTVDCHGLALRSVP-RNI-PRNT-ERLDLNG 64
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N ++ + F GL+ L+VL L N + + F L LE L L +N + + F
Sbjct: 65 NNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFL 124
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
G L L L +NQ++++P +F + L++ N + + DGAF L L L L
Sbjct: 125 GTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNN 184
Query: 313 AGLTNM 318
+T +
Sbjct: 185 NNITRL 190
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 43/128 (33%), Positives = 59/128 (46%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L NRI T++ A Q L+ + L+ N L P F KL L L+ N++ ++
Sbjct: 84 LQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIP 143
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G +K L L N + + D F L LE L L N I+R+ A F + LR
Sbjct: 144 RKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 203
Query: 260 LYLDDNQL 267
L N L
Sbjct: 204 FRLHSNNL 211
Score = 147 (56.8 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 49/168 (29%), Positives = 79/168 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E + E++L N + + F K L+ L+L N + +L
Sbjct: 284 VDCRGKGLTEIPTN--LP-ETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELA 340
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + ++ FEGL +L++L L+ N++ + +F L L
Sbjct: 341 PDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 400
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL-RGAGLTNMMGHSMALGDYLH 330
L + N T+A G F+ L + + L + + + H L DYLH
Sbjct: 401 LSLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDC--HLKWLADYLH 446
Score = 129 (50.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 39/107 (36%), Positives = 53/107 (49%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN +P L + HL +DL NRIS + F +T L L L N+
Sbjct: 746 KDVTELYLDGNQFTLVPKEL-SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 804
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
LR +P +F L L L + N + + +GAFN L LS L + GA
Sbjct: 805 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI-GA 850
Score = 129 (50.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L+ N+ + V K K L +++L N + L
Sbjct: 730 VRCSNKGLKVLP-KGI-PKD-VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLS 785
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
++ F+ ++ L L L NR+ I F+GL +LR+L L N + VP +F L L+
Sbjct: 786 NQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSH 845
Query: 284 LRVGLN 289
L +G N
Sbjct: 846 LAIGAN 851
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 32/107 (29%), Positives = 57/107 (53%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++++ N+I ++ A + S + + L+ N+L N+ + F+ E L L L N+
Sbjct: 550 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 609
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
+S V N +FIGL S+++L+L N + + F L L L+L N
Sbjct: 610 ISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLAN 656
>ZFIN|ZDB-GENE-040220-4 [details] [associations]
symbol:tlr21 "toll-like receptor 21" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-4 GO:GO:0007165 InterPro:IPR003591
SMART:SM00369 GO:GO:0005622 GO:GO:0052033 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:BX571826 IPI:IPI00487094
RefSeq:NP_001186264.1 UniGene:Dr.161713 UniGene:Dr.85003
Ensembl:ENSDART00000060142 GeneID:402884 KEGG:dre:402884 CTD:402884
OMA:LTLDNSC NextBio:20816703 ArrayExpress:F1QMN8 Bgee:F1QMN8
Uniprot:F1QMN8
Length = 989
Score = 202 (76.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 61/184 (33%), Positives = 94/184 (51%)
Query: 134 LNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
++ S+ L +YNRI + A L+ ++L+ N + + + + L L+L++
Sbjct: 381 IHNSLTNLSYRYNRILQISGYAFSNTPKLEILELNINIIAYMDHKALSGLKDLKTLRLDN 440
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N LS + N +F L +LK LNLR N + + + F LS L+ LDLG N+IS++ F+
Sbjct: 441 NLLSDIYNDSFEDLTNLKTLNLRNNEIAVIFNYTFQNLSKLDILDLGGNKISQLKPHAFD 500
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYL-GMLAELRVGLNV---FTTLADGAFNGLGRLSAL 308
GL +L LYLD N L+ + F L G L L + N+ FT F + RL L
Sbjct: 501 GLYSLTNLYLDRNHLKMIDVVLFGKLSGTLQVLDLQGNMIMYFTEHTHSPFKNMSRLYDL 560
Query: 309 DLRG 312
L G
Sbjct: 561 KLNG 564
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 138 IQRLVLKYNRIKTVDSA--IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L +++N + + S + ++SL ++ +N+++ I F KL L+LN N +
Sbjct: 360 LKSLKMEHNHLTKLTSCNKAEIHNSLTNLSYRYNRILQISGYAFSNTPKLEILELNINII 419
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ +++K GLK LK L L N L D+ + F L++L+ L+L N I+ I F+ L+
Sbjct: 420 AYMDHKALSGLKDLKTLRLDNNLLSDIYNDSFEDLTNLKTLNLRNNEIAVIFNYTFQNLS 479
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL-GRLSALDLRG 312
L IL L N++ + +F L L L + N + F L G L LDL+G
Sbjct: 480 KLDILDLGGNKISQLKPHAFDGLYSLTNLYLDRNHLKMIDVVLFGKLSGTLQVLDLQG 537
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 55/190 (28%), Positives = 92/190 (48%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSL-QHVDLSHNQLVNIPIRGF-EPQEKLVELQLNHNK 194
I +++L+ N I + ++ ++ S+ + +DLS N+L + F Q +L L++ HN
Sbjct: 310 IPKMLLQSNSIGALKNNTFRYCPSITREMDLSRNELKSAGCLQFLHNQTQLKSLKMEHNH 369
Query: 195 LSSVN--NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
L+ + NK I SL L+ R N + + F+ LE L+L N I+ +D
Sbjct: 370 LTKLTSCNKAEIH-NSLTNLSYRYNRILQISGYAFSNTPKLEILELNINIIAYMDHKALS 428
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
GL L+ L LD+N L + SF L L L + N + + F L +L LDL G
Sbjct: 429 GLKDLKTLRLDNNLLSDIYNDSFEDLTNLKTLNLRNNEIAVIFNYTFQNLSKLDILDLGG 488
Query: 313 AGLTNMMGHS 322
++ + H+
Sbjct: 489 NKISQLKPHA 498
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ N I + + Q S L +DL N++ + F+ L L L+ N L
Sbjct: 456 NLKTLNLRNNEIAVIFNYTFQNLSKLDILDLGGNKISQLKPHAFDGLYSLTNLYLDRNHL 515
Query: 196 SSVNNKTFIGLK-SLKVLNLRGNFLEDLPDRLFAPLSHLEEL-DL---GQ--NRISRIDQ 248
++ F L +L+VL+L+GN + + +P ++ L DL GQ N I+ + +
Sbjct: 516 KMIDVVLFGKLSGTLQVLDLQGNMIMYFTEHTHSPFKNMSRLYDLKLNGQQPNGINLLPR 575
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV--FTTLADGAFNGLGRLS 306
A F GLT+L+ LYL +N + +F L L L + + L G F L +L
Sbjct: 576 AFFRGLTSLKSLYLTNNHIIGFGDETFDDLKNLDYLTLDNSCAGVAQLQSGIFKSLQKLR 635
Query: 307 ALDLRGAGL 315
L L G+
Sbjct: 636 TLSLENMGI 644
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 48/162 (29%), Positives = 81/162 (50%)
Query: 135 NPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
N +I V Y R T + F ++L ++ +SH+ + + + F+ L L L+ N
Sbjct: 37 NHTIFTCVKSYERDITAIVSDVFPTAL-NLTISHSNIEYVQSQSFDHLPNLTALILDANH 95
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+++++ F L L+ LNL N + L +F+ L +L +L LG N+++ D+ F L
Sbjct: 96 ITNIDKDAFNNLHHLQTLNLSCNNISFLHRDVFSDLHNLTQLLLGSNKLTNPDKYLFSSL 155
Query: 255 TALRILYLDDNQLRSVPT--PSFIYLGMLAELRVGLNVFTTL 294
T L+IL L N L + + S L L +L + N TTL
Sbjct: 156 TNLKILDLRRNHLYNFSSVVESITNLTSLIKLDLSFNKLTTL 197
Score = 137 (53.3 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 50/190 (26%), Positives = 84/190 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAI--QFYSSLQHVDLSHNQLVNIPIRGFEP---QEKLVELQLN 191
S+ L L N +K +D + + +LQ +DL N ++ P +L +L+LN
Sbjct: 504 SLTNLYLDRNHLKMIDVVLFGKLSGTLQVLDLQGNMIMYFTEHTHSPFKNMSRLYDLKLN 563
Query: 192 HNKLSSVN---NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN--RISRI 246
+ + +N F GL SLK L L N + D F L +L+ L L + ++++
Sbjct: 564 GQQPNGINLLPRAFFRGLTSLKSLYLTNNHIIGFGDETFDDLKNLDYLTLDNSCAGVAQL 623
Query: 247 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 306
F+ L LR L L++ ++S F L L L + N +L + L L
Sbjct: 624 QSGIFKSLQKLRTLSLENMGIKSFSKDVFGNLTGLKTLHLNRNPMMSLDISLLDNLTNLI 683
Query: 307 ALDLRGAGLT 316
+D+R L+
Sbjct: 684 YIDMRSCPLS 693
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 58/200 (29%), Positives = 92/200 (46%)
Query: 119 VVTC-KEANLDVIPITLN--PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNI 174
+ TC K D+ I + P+ L + ++ I+ V S + +L + L N + NI
Sbjct: 40 IFTCVKSYERDITAIVSDVFPTALNLTISHSNIEYVQSQSFDHLPNLTALILDANHITNI 99
Query: 175 PIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR-LFAPLSHL 233
F L L L+ N +S ++ F L +L L L N L + PD+ LF+ L++L
Sbjct: 100 DKDAFNNLHHLQTLNLSCNNISFLHRDVFSDLHNLTQLLLGSNKLTN-PDKYLFSSLTNL 158
Query: 234 EELDLGQNRISRIDQAC--FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
+ LDL +N + LT+L L L N+L ++ + + LA L +G N
Sbjct: 159 KILDLRRNHLYNFSSVVESITNLTSLIKLDLSFNKLTTLQHSTHLPES-LALLYLGDNKL 217
Query: 292 TTLA-DGAFNGLGRLSALDL 310
TL D +F L + LDL
Sbjct: 218 KTLGCDKSF--LMNVKKLDL 235
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 204 (76.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L V+P + + L L N V + Y L +DL
Sbjct: 727 CPTECTCLDT--VVRCSNKGLKVLPKGIPRDVTELYLDGNHFTLVPKELYNYKHLTLIDL 784
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 785 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 844
Query: 227 FAPLSHLEELDLGQN 241
F+ LS L L +G N
Sbjct: 845 FSDLSALSHLAIGAN 859
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C++ +V C+ L IP L +I + L+ N IK + A Y L+ +D
Sbjct: 273 CPAACTCSNN--IVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 330
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQ+ + F+ L L L NK++ + F GL SL++L L N + L
Sbjct: 331 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 390
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L A++ ++L N
Sbjct: 391 AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 430
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 51/186 (27%), Positives = 86/186 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV-- 164
CP C C+ T V C L +P ++ + +RL L N I + ++ L+H+
Sbjct: 28 CPAQCSCSGST--VDCHGLALRSVPRSIPRNTERLDLNGNNITRITKTD--FAGLRHLRV 83
Query: 165 -DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L N++ I F+ ++L L+LN N L F+G L L+L N ++ +P
Sbjct: 84 LQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIP 143
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F ++ L L N+IS I+ F L L +L L++N + + SF ++ L
Sbjct: 144 RKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 203
Query: 284 LRVGLN 289
R+ N
Sbjct: 204 FRLHSN 209
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 50/154 (32%), Positives = 73/154 (47%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL+ N + I F L LQL NK+S++ F LK L+ L L N L+
Sbjct: 58 ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQL 117
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
P+ LF S L LDL +N+I I + F G ++ L LD NQ+ + +F L L
Sbjct: 118 FPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDL 177
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L + N T L+ +FN + +L L L
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 53/167 (31%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP PQ EL+LN+N+ + + F L L+ +N N + D+
Sbjct: 517 VDCSNQKLTKIP--DHIPQYT-AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 573
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + + E+ L NR+ + F+GL +L+ L L N++ V SFI L +
Sbjct: 574 EEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVR 633
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N T+A GAF+ L LS L+L A N + LG++L
Sbjct: 634 LLSLYDNQIATIAPGAFDTLHSLSTLNLL-ANPFNCNCYLAWLGEWL 679
Score = 166 (63.5 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 50/162 (30%), Positives = 75/162 (46%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--S 160
A CP C C T V C L IP + L L N +++ F
Sbjct: 502 ADLACPEKCRCEGTT--VDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQ 559
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++ S+N++ +I FE + E+ L N+L +V +K F GL+SLK L LR N +
Sbjct: 560 LRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 619
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F LS + L L N+I+ I F+ L +L L L
Sbjct: 620 CVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNL 661
Score = 165 (63.1 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 42/132 (31%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + IP F P +KL + L++N++S + F GL+SL L L GN +
Sbjct: 301 TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 360
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+LP LF L L+ L L N+I+ + F+ L L +L L DN+L+++ +F L
Sbjct: 361 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 420
Query: 280 MLAELRVGLNVF 291
+ + + N F
Sbjct: 421 AIQTMHLAQNPF 432
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L LN N ++ + F GL+ L+VL L N + + F L LE L L +N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F G + L L L +NQ++++P +F + L++ N + + DGAF L L
Sbjct: 120 ELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 179
Query: 308 LDLRGAGLTNM 318
L L +T +
Sbjct: 180 LTLNNNNITRL 190
Score = 148 (57.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 42/128 (32%), Positives = 59/128 (46%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I T++ A Q L+ + L+ N L P F KL L L+ N++ ++
Sbjct: 84 LQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIP 143
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G +K L L N + + D F L LE L L N I+R+ A F + LR
Sbjct: 144 RKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 203
Query: 260 LYLDDNQL 267
L N L
Sbjct: 204 FRLHSNNL 211
Score = 147 (56.8 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 149 KTVDSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLK 207
K D Q+ + L+ L++N+ + G F+ +L ++ ++NK++ + F G
Sbjct: 526 KIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAA 582
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
+ + L N LE++ ++F L L+ L L NRIS + F GL+++R+L L DNQ+
Sbjct: 583 GVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQI 642
Query: 268 RSVPTPSFIYLGMLAELRVGLNVF 291
++ +F L L+ L + N F
Sbjct: 643 ATIAPGAFDTLHSLSTLNLLANPF 666
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E + E++L N + + F K L+ ++L N + +L
Sbjct: 284 VDCRGKGLTEIPTN--LP-ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELA 340
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + ++ FEGL +L++L L+ N++ + +F L L
Sbjct: 341 PDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 400
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL-RGAGLTNMMGHSMALGDYLH 330
L + N T+A G F+ L + + L + + + H L DYLH
Sbjct: 401 LSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC--HLKWLADYLH 446
Score = 129 (50.5 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 39/126 (30%), Positives = 66/126 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L+ N + V + + K L +++L N + L
Sbjct: 738 VRCSNKGLKVLP-KGI-PRD-VTELYLDGNHFTLVPKELY-NYKHLTLIDLSNNRISTLS 793
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
++ F+ ++ L L L NR+ I F+GL +LR+L L N + VP +F L L+
Sbjct: 794 NQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSH 853
Query: 284 LRVGLN 289
L +G N
Sbjct: 854 LAIGAN 859
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 37/102 (36%), Positives = 51/102 (50%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L L GN +P L+ HL +DL NRIS + F +T L L L N+LR +P
Sbjct: 759 LYLDGNHFTLVPKELYN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 817
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+F L L L + N + + +GAF+ L LS L + GA
Sbjct: 818 PRTFDGLKSLRLLSLHGNDISVVPEGAFSDLSALSHLAI-GA 858
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 204 (76.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 53/184 (28%), Positives = 89/184 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C T V C L IP + + +RL L N I + + L+ +
Sbjct: 34 CPALCTCTGTT--VDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQ 91
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L NQ+ + F+ ++L L+LN N+L + F ++L L+L N L+ +P +
Sbjct: 92 LMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRK 151
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F + L+ L L +N+IS I++ F L L +L L++N + ++P SF ++ L R
Sbjct: 152 AFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFR 211
Query: 286 VGLN 289
+ N
Sbjct: 212 LHSN 215
Score = 193 (73.0 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C++ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 278 SSGSCPAMCSCSNG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKL 335
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F+ L L L NK++ + F GL +L++L L N +
Sbjct: 336 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ F L +L L L N+I + + F L A++ L+L N
Sbjct: 396 IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L +P + ++ L L N+ V + + LQ VDL
Sbjct: 734 CPQECACLDT--VVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + L + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGI 851
Query: 227 FAPLSHLEELDLGQN 241
FA ++ L L +G N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 177 (67.4 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 53/158 (33%), Positives = 74/158 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E VV C L IP + S L L N I +++ F S L+ +
Sbjct: 513 CPHKCRC--EASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKI 570
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE + EL L N+L SV + F GL L+ L LR N + + +
Sbjct: 571 NLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F L ++ L L N I+ I F+ L AL L L
Sbjct: 631 DSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 174 (66.3 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 46/149 (30%), Positives = 73/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ ++L+ N + I F ++L LQL N++ +V F +K L+ L L N L+
Sbjct: 64 ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQV 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N + + + F G T L+ L LD NQ+ + +F L L
Sbjct: 124 LPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N TT+ +FN + +L L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 56/167 (33%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
V+ S +L IP R PQ EL+LN+N++S + F L LK +NL N + ++
Sbjct: 524 VECSGLKLSKIPER--IPQST-TELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEI 580
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F + + EL L N++ + F GL LR L L +N++ + SF L +
Sbjct: 581 EDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVR 640
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT++ GAF+ L LS L+L A N LGD+L
Sbjct: 641 LLSLYDNHITTISPGAFDTLQALSTLNLL-ANPFNCNCQLAWLGDWL 686
Score = 167 (63.8 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + +IP F P KL + L++N+++ + F GL+SL L L GN +
Sbjct: 310 TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKI 369
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I+ I F+ L L +L L DN+++S+ +F L
Sbjct: 370 TDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 429
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 430 AIQTLHLAQNPF 441
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L+LN N ++ ++ F GLK L+VL L N + + F + LE L L +N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ AL L L +N L++VP +F L L++ N + + +GAF L L
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEV 185
Query: 308 LDLRGAGLTNM 318
L L +T +
Sbjct: 186 LTLNNNNITTI 196
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 160 SLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S + L++N++ + G F+ L ++ L++NK+S + + TF G S+ L+L N
Sbjct: 541 STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQ 600
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
LE + +F L L L L NRIS I F GL +R+L L DN + ++ +F L
Sbjct: 601 LESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTL 660
Query: 279 GMLAELRVGLNVF 291
L+ L + N F
Sbjct: 661 QALSTLNLLANPF 673
Score = 137 (53.3 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 42/128 (32%), Positives = 58/128 (45%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I V+ A L+ + L+ NQL +P F+ + L L L+ N L +V
Sbjct: 90 LQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVP 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G LK L L N + + + F L LE L L N I+ I + F + LR
Sbjct: 150 RKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT 209
Query: 260 LYLDDNQL 267
L N L
Sbjct: 210 FRLHSNHL 217
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
E + E++L N + S+ F + L+ ++L N + ++ F L L L L N+
Sbjct: 309 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 368
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + + F GL L++L L+ N++ + +F L L+ L + N +LA G F L
Sbjct: 369 ITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Query: 303 GRLSALDL 310
+ L L
Sbjct: 429 RAIQTLHL 436
Score = 68 (29.0 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 312 GAGLTNM 318
G +T++
Sbjct: 366 GNKITDL 372
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 204 (76.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 53/184 (28%), Positives = 89/184 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C T V C L IP + + +RL L N I + + L+ +
Sbjct: 34 CPALCTCTGTT--VDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQ 91
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L NQ+ + F+ ++L L+LN N+L + F ++L L+L N L+ +P +
Sbjct: 92 LMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRK 151
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F + L+ L L +N+IS I++ F L L +L L++N + ++P SF ++ L R
Sbjct: 152 AFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFR 211
Query: 286 VGLN 289
+ N
Sbjct: 212 LHSN 215
Score = 193 (73.0 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C++ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 278 SSGSCPAMCSCSNG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKL 335
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F+ L L L NK++ + F GL +L++L L N +
Sbjct: 336 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ F L +L L L N+I + + F L A++ L+L N
Sbjct: 396 IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L +P + ++ L L N+ V + + LQ VDL
Sbjct: 734 CPQECACLDT--VVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + L + +
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGI 851
Query: 227 FAPLSHLEELDLGQN 241
FA ++ L L +G N
Sbjct: 852 FADVTSLSHLAIGAN 866
Score = 177 (67.4 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 53/158 (33%), Positives = 74/158 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E VV C L IP + S L L N I +++ F S L+ +
Sbjct: 513 CPHKCRC--EASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKI 570
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE + EL L N+L SV + F GL L+ L LR N + + +
Sbjct: 571 NLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHN 630
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F L ++ L L N I+ I F+ L AL L L
Sbjct: 631 DSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 174 (66.3 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 46/149 (30%), Positives = 73/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ ++L+ N + I F ++L LQL N++ +V F +K L+ L L N L+
Sbjct: 64 ERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQV 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N + + + F G T L+ L LD NQ+ + +F L L
Sbjct: 124 LPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N TT+ +FN + +L L
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 56/167 (33%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
V+ S +L IP R PQ EL+LN+N++S + F L LK +NL N + ++
Sbjct: 524 VECSGLKLSKIPER--IPQST-TELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEI 580
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F + + EL L N++ + F GL LR L L +N++ + SF L +
Sbjct: 581 EDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVR 640
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT++ GAF+ L LS L+L A N LGD+L
Sbjct: 641 LLSLYDNHITTISPGAFDTLQALSTLNLL-ANPFNCNCQLAWLGDWL 686
Score = 167 (63.8 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + +IP F P KL + L++N+++ + F GL+SL L L GN +
Sbjct: 310 TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKI 369
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I+ I F+ L L +L L DN+++S+ +F L
Sbjct: 370 TDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 429
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 430 AIQTLHLAQNPF 441
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L+LN N ++ ++ F GLK L+VL L N + + F + LE L L +N++ +
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ AL L L +N L++VP +F L L++ N + + +GAF L L
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEV 185
Query: 308 LDLRGAGLTNM 318
L L +T +
Sbjct: 186 LTLNNNNITTI 196
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 160 SLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S + L++N++ + G F+ L ++ L++NK+S + + TF G S+ L+L N
Sbjct: 541 STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQ 600
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
LE + +F L L L L NRIS I F GL +R+L L DN + ++ +F L
Sbjct: 601 LESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTL 660
Query: 279 GMLAELRVGLNVF 291
L+ L + N F
Sbjct: 661 QALSTLNLLANPF 673
Score = 137 (53.3 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 42/128 (32%), Positives = 58/128 (45%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I V+ A L+ + L+ NQL +P F+ + L L L+ N L +V
Sbjct: 90 LQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVP 149
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G LK L L N + + + F L LE L L N I+ I + F + LR
Sbjct: 150 RKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRT 209
Query: 260 LYLDDNQL 267
L N L
Sbjct: 210 FRLHSNHL 217
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
E + E++L N + S+ F + L+ ++L N + ++ F L L L L N+
Sbjct: 309 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 368
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + + F GL L++L L+ N++ + +F L L+ L + N +LA G F L
Sbjct: 369 ITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 428
Query: 303 GRLSALDL 310
+ L L
Sbjct: 429 RAIQTLHL 436
Score = 68 (29.0 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 312 GAGLTNM 318
G +T++
Sbjct: 366 GNKITDL 372
>WB|WBGene00003915 [details] [associations]
symbol:pan-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0002119 GO:GO:0018996 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
EMBL:Z34802 GeneTree:ENSGT00700000104056 GeneID:175596
KEGG:cel:CELE_M88.6 UCSC:M88.6b CTD:175596 HOGENOM:HOG000021363
NextBio:888834 PIR:T23841 RefSeq:NP_497925.1
ProteinModelPortal:Q9U3A0 SMR:Q9U3A0 PRIDE:Q9U3A0
EnsemblMetazoa:M88.6b WormBase:M88.6b ArrayExpress:Q9U3A0
Uniprot:Q9U3A0
Length = 594
Score = 199 (75.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 51/144 (35%), Positives = 78/144 (54%)
Query: 133 TLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLN 191
+L S + L L+ NRIK ++ + SL+ +DL+ N++ I + FE +K+ EL LN
Sbjct: 124 SLGGSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLN 183
Query: 192 HNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACF 251
N + + TF G+K+LK L L+ LE + F L+ LE+L L N + ID F
Sbjct: 184 ENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIF 243
Query: 252 EGLTALRILYLDDNQLRSVPTPSF 275
L LR+L L N++ +V SF
Sbjct: 244 SALKNLRVLDLGSNKISNVEMKSF 267
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L N+I+ +D A + ++ + L+ N + + F+ + L +L L + L
Sbjct: 152 SLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNL 211
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ F GL SL+ L L N LE++ +F+ L +L LDLG N+IS ++ F L
Sbjct: 212 EIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNLRVLDLGSNKISNVEMKSFPKLE 271
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L++N + S+ + L L N ++ D GL R ++
Sbjct: 272 KL---VLNNNTIDSMKSIKLKDLPSLVVALFDRNKIESIGDMDMFGLTRSDRIETLSLAR 328
Query: 316 TNM 318
N+
Sbjct: 329 NNL 331
Score = 143 (55.4 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 55/222 (24%), Positives = 96/222 (43%)
Query: 109 PDCDCNDETLVVT-------CKEANLDVIP---ITLNPS-IQRLVLKYNRIKTVDSAIQF 157
P C C D + T C+ A++ + +LN + + RL ++ + + + +
Sbjct: 41 PVCICADNGIFSTVKGFTIECESASIASVSENLASLNGTELGRLTIRDSTVNVLPQDLFE 100
Query: 158 YSSLQHVDLSHNQLVNIPIRGFEPQEKLVEL-QLNHNKLSSVNNKTFIGLKSLKVLNLRG 216
+ V L L + F+ EL L N++ + F GLKSLK L+L
Sbjct: 101 NVFAKQVKLERCGLSTLQPNSFQSLGGSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAM 160
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 276
N ++++ F L +EEL L +N I + F+G+ L+ L L + L + +F
Sbjct: 161 NKIQEIDVGAFEELKKVEELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFR 220
Query: 277 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L +L + N + F+ L L LDL ++N+
Sbjct: 221 GLNSLEQLILSNNNLENIDWTIFSALKNLRVLDLGSNKISNV 262
>FB|FBgn0243486 [details] [associations]
symbol:rdo "reduced ocelli" species:7227 "Drosophila
melanogaster" [GO:0008056 "ocellus development" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104286
GO:GO:0008056 EMBL:BT004502 RefSeq:NP_609861.1 UniGene:Dm.21796
SMR:Q9VJA9 MINT:MINT-990018 STRING:Q9VJA9
EnsemblMetazoa:FBtr0081029 GeneID:35077 KEGG:dme:Dmel_CG15151
UCSC:CG15151-RA CTD:35077 FlyBase:FBgn0243486 InParanoid:Q9VJA9
OMA:FRGQDNL OrthoDB:EOG4CZ8WX GenomeRNAi:35077 NextBio:791738
Uniprot:Q9VJA9
Length = 741
Score = 200 (75.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 60/193 (31%), Positives = 98/193 (50%)
Query: 132 ITLNPSIQRLVLKYNRIKTVDS------AIQFYSS--LQHVDLSHNQLVNIPIRGFEPQE 183
IT+ P++++ +K ++ DS A F+ L+ +DLS N + NI F Q+
Sbjct: 72 ITIGPALRQF-MKLEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNFRGQD 130
Query: 184 KLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
L+EL L+ NK+ + + TF L L+ LNL N + +L R F LS L+ LDL N +
Sbjct: 131 NLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPL 190
Query: 244 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 303
+ F + L++L + QL+ + + L +L+EL +G N F L F +
Sbjct: 191 QDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVK 250
Query: 304 RLSALDLRGAGLT 316
RL+ + L G L+
Sbjct: 251 RLTKVLLDGNQLS 263
Score = 155 (59.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 49/175 (28%), Positives = 81/175 (46%)
Query: 137 SIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L N++ + S + + L+ ++L+ N +V + R F +L L L+ N L
Sbjct: 131 NLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPL 190
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ F + LKVL R L+ + +++ L L ELDLG+N +D+ F +
Sbjct: 191 QDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVK 250
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + LD NQL V F L L + N + + +F L L+ LDL
Sbjct: 251 RLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDL 305
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 35/108 (32%), Positives = 56/108 (51%)
Query: 138 IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ +++L N++ V D + SL H+DLS+N+L +P F L L L++NKL
Sbjct: 252 LTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLV 311
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPD-----RLFAPLSHLEELDLG 239
+ ++ L +L LN+ GN L DL + L L+HL D+G
Sbjct: 312 RLEPQSIRSLSNLLTLNISGNVLMDLREMRETFELIPQLTHLAIADMG 359
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 51/210 (24%), Positives = 94/210 (44%)
Query: 107 CPPDCDCNDETL---VVTCKEANLDVI--PITLNPSIQRLVLKYNRIK-TVDSAIQFYSS 160
CP +C C+ + L C + L+ + P L+ ++ ++++ R T+ A++ +
Sbjct: 24 CPTECQCSMDDLDRYQAICTKGGLNSLLSPNELDVDVKVIIIRGPRNSITIGPALRQFMK 83
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ + ++ + L I F + L L L+ N ++++ F G +L L+L N +
Sbjct: 84 LEILRITDSNLPAIGAESFWGLKYLRILDLSKNNITNITENNFRGQDNLLELDLSKNKVL 143
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
+ F L+ L L+L N I + Q F L+ L+ L L N L+ + F +
Sbjct: 144 RMASSTFRHLTDLRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDVPE 203
Query: 281 LAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L+ + +N L LS LDL
Sbjct: 204 LKVLKCRNCQLKKINPQMYNLLPLLSELDL 233
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 49/182 (26%), Positives = 81/182 (44%)
Query: 138 IQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++RL L N I + V S L+++DLS N L ++ F +L L+ + +L
Sbjct: 156 LRRLNLADNSIVELVQRNFFMLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLK 215
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+N + + L L L+L N + L F + L ++ L N++S + F +
Sbjct: 216 KINPQMYNLLPLLSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKS 275
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L L N+L VP SF+ L L L + N L + L L L++ G L
Sbjct: 276 LNHLDLSYNRLAKVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGNVLM 335
Query: 317 NM 318
++
Sbjct: 336 DL 337
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 43/171 (25%), Positives = 76/171 (44%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N I + ++ + +L +DLS N+++ + F L L L N + +
Sbjct: 111 LDLSKNNITNITENNFRGQDNLLELDLSKNKVLRMASSTFRHLTDLRRLNLADNSIVELV 170
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ F L LK L+L GN L+DL +F + L+ L ++ +I+ + L L
Sbjct: 171 QRNFFMLSRLKYLDLSGNPLQDLQPDVFRDVPELKVLKCRNCQLKKINPQMYNLLPLLSE 230
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L N+ + + F + L ++ + N + + D F L+ LDL
Sbjct: 231 LDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDL 281
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 36/112 (32%), Positives = 51/112 (45%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L EL L N+ ++ F +K L + L GN L + D+LF L LDL NR++
Sbjct: 228 LSELDLGRNEFKFLDKDEFRDVKRLTKVLLDGNQLSVVVDQLFRMQKSLNHLDLSYNRLA 287
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 296
++ F LT L L L N+L + S L L L + NV L +
Sbjct: 288 KVPNDSFLQLTNLTFLDLSYNKLVRLEPQSIRSLSNLLTLNISGNVLMDLRE 339
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 203 (76.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQ 162
S CP C C++ +V C+ L IP L I + L+ N IK++ + A Y L+
Sbjct: 91 SISCPSACTCSNN--IVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLK 148
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+D+S NQ+ +I F+ + L L L NK++ + F GL SL++L L N + L
Sbjct: 149 RIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCL 208
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L A++ L+L N
Sbjct: 209 RVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN 251
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 50/161 (31%), Positives = 76/161 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--SLQHV 164
CP C C E +V C L +P L + L L N I +++ F +L+ +
Sbjct: 321 CPDKCRC--EGTIVDCSNQKLARVPSHLPEYVTDLRLNDNEISVLEATGVFKKLPNLRKI 378
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ + F+ + EL L N+L +V+ + F GL LK L LR N + + +
Sbjct: 379 NLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSN 438
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F LS + L L NRIS I F L +L + L N
Sbjct: 439 DTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSN 479
Score = 176 (67.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 44/135 (32%), Positives = 66/135 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP C C ET VV C L +P + + L L+ N + V + + L +DL
Sbjct: 542 CPEQCTCV-ET-VVRCSNRGLRALPRGIPKDVTELYLEGNHLTAVPRELSIFRHLTLIDL 599
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N + + F L L L++N+L + +F GL+SL+VL L GN + +P+
Sbjct: 600 SNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDISSVPEGS 659
Query: 227 FAPLSHLEELDLGQN 241
F L+ L L LG N
Sbjct: 660 FNDLTSLSHLALGTN 674
Score = 157 (60.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 41/128 (32%), Positives = 66/128 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N + +IP F +KL + ++ N++S + F GLKSL L L GN + ++P
Sbjct: 126 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIP 185
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L L+ L L N+I+ + F+ L L +L L DN+L+++ F L +
Sbjct: 186 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQT 245
Query: 284 LRVGLNVF 291
L + N F
Sbjct: 246 LHLAQNPF 253
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 48/167 (28%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L +P P E + +L+LN N++S + F L +L+ +NL N ++++
Sbjct: 332 VDCSNQKLARVP--SHLP-EYVTDLRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKEV 388
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + ++EL L N++ + F GL+ L+ L L N + V +F+ L +
Sbjct: 389 REGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVR 448
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N +T+ GAF L LS ++L N H LG +L
Sbjct: 449 LLSLYDNRISTITPGAFTTLVSLSTINLLSNPF-NCNCHLAWLGKWL 494
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 45/126 (35%), Positives = 67/126 (53%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P RG P++ + EL L N L++V + I + L +++L N + L
Sbjct: 553 VRCSNRGLRALP-RGI-PKD-VTELYLEGNHLTAVPRELSI-FRHLTLIDLSNNSIGMLT 608
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ +SHL L L NR+ I F GL +LR+L L N + SVP SF L L+
Sbjct: 609 NYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSH 668
Query: 284 LRVGLN 289
L +G N
Sbjct: 669 LALGTN 674
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E +VE++L N + S+ F K LK +++ N + D+
Sbjct: 105 VDCRGKGLTEIPAN--LP-EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 161
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ I + F+GL +L++L L+ N++ + +F L L
Sbjct: 162 ADAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNL 221
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N T++ G F L + L L
Sbjct: 222 LSLYDNKLQTISKGLFAPLQAIQTLHL 248
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 36/104 (34%), Positives = 51/104 (49%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN L +P L + HL +DL N I + F ++ L L L N+
Sbjct: 569 KDVTELYLEGNHLTAVPREL-SIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNR 627
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR +P SF L L L + N +++ +G+FN L LS L L
Sbjct: 628 LRCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLAL 671
>UNIPROTKB|Q8WXD0 [details] [associations]
symbol:RXFP2 "Relaxin receptor 2" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0007189
"adenylate cyclase-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007193 "adenylate cyclase-inhibiting
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0017046 "peptide hormone binding" evidence=IEA] [GO:0030819
"positive regulation of cAMP biosynthetic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0043066 GO:GO:0008285
EMBL:CH471075 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0007193 GO:GO:0030819 GO:GO:0008584
GO:GO:0017046 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 GO:GO:0001556
GO:GO:0016500 MIM:219050 HOVERGEN:HBG026354 HOGENOM:HOG000049056
CTD:122042 KO:K04307 OrthoDB:EOG47M1XF EMBL:AF403384 EMBL:AF453828
EMBL:AY899851 EMBL:AL138708 EMBL:AL159161 IPI:IPI00103510
IPI:IPI00654597 RefSeq:NP_001159530.1 RefSeq:NP_570718.1
UniGene:Hs.680763 ProteinModelPortal:Q8WXD0 SMR:Q8WXD0
STRING:Q8WXD0 PhosphoSite:Q8WXD0 DMDM:21362625 PaxDb:Q8WXD0
PRIDE:Q8WXD0 DNASU:122042 Ensembl:ENST00000298386
Ensembl:ENST00000380314 GeneID:122042 KEGG:hsa:122042
UCSC:uc001utt.3 GeneCards:GC13P032313 HGNC:HGNC:17318 MIM:606655
neXtProt:NX_Q8WXD0 PharmGKB:PA134918556 InParanoid:Q8WXD0
OMA:KILCCAD PhylomeDB:Q8WXD0 ChEMBL:CHEMBL1628482 GenomeRNAi:122042
NextBio:80847 ArrayExpress:Q8WXD0 Bgee:Q8WXD0 CleanEx:HS_RXFP2
Genevestigator:Q8WXD0 GermOnline:ENSG00000133105 Uniprot:Q8WXD0
Length = 754
Score = 200 (75.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 53/174 (30%), Positives = 91/174 (52%)
Query: 138 IQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++++ L++N I+ + F +LQ + L+HN + + F+ +L L L+ N ++
Sbjct: 163 LKKIFLQHNCIRHISRKAFFGLCNLQILYLNHNCITTLRPGIFKDLHQLTWLILDDNPIT 222
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ + F GL SL L++ N+LE LP ++ A + L +DL NRI + + F +
Sbjct: 223 RISQRLFTGLNSLFFLSMVNNYLEALPKQMCAQMPQLNWVDLEGNRIKYLTNSTFLSCDS 282
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +L+L NQ+ VP +F L L EL + N T L+ F L L L+L
Sbjct: 283 LTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNTITELSPHLFKDLKLLQKLNL 336
Score = 148 (57.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N++ ++P + F KL ++ L HN + ++ K F GL +L++L L N + L
Sbjct: 142 LSLKKNKIHSLPDKVFIKYTKLKKIFLQHNCIRHISRKAFFGLCNLQILYLNHNCITTLR 201
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+F L L L L N I+RI Q F GL +L L + +N L ++P + L
Sbjct: 202 PGIFKDLHQLTWLILDDNPITRISQRLFTGLNSLFFLSMVNNYLEALPKQMCAQMPQLNW 261
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
+ + N L + F L+ L L
Sbjct: 262 VDLEGNRIKYLTNSTFLSCDSLTVLFL 288
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 141 LVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L+L N I + + +SL + + +N L +P + +L + L N++ +
Sbjct: 214 LILDDNPITRISQRLFTGLNSLFFLSMVNNYLEALPKQMCAQMPQLNWVDLEGNRIKYLT 273
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
N TF+ SL VL L N + +P++ F+ L +L ELDL N I+ + F+ L L+
Sbjct: 274 NSTFLSCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNTITELSPHLFKDLKLLQK 333
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAEL 284
L L N L + F L L L
Sbjct: 334 LNLSSNPLMYLHKNQFESLKQLQSL 358
Score = 126 (49.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + + L+ NRIK + +S SL + L NQ+ +P + F + L EL L+ N
Sbjct: 257 PQLNWVDLEGNRIKYLTNSTFLSCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNT 316
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++ ++ F LK L+ LNL N L L F L L+ LDL + I I+ F+ +
Sbjct: 317 ITELSPHLFKDLKLLQKLNLSSNPLMYLHKNQFESLKQLQSLDLERIEIPNINTRMFQPM 376
Query: 255 TALRILY 261
L +Y
Sbjct: 377 KNLSHIY 383
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L VDL N++ + F + L L L N++ V KTF LK+L L+L N +
Sbjct: 259 LNWVDLEGNRIKYLTNSTFLSCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNTIT 318
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
+L LF L L++L+L N + + + FE L L+ L L+ ++ ++ T F
Sbjct: 319 ELSPHLFKDLKLLQKLNLSSNPLMYLHKNQFESLKQLQSLDLERIEIPNINTRMF 373
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 43/149 (28%), Positives = 70/149 (46%)
Query: 184 KLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
K EL+ + L SV I ++ +L+L+ N + LPD++F + L+++ L N I
Sbjct: 118 KETELECVNGDLKSV---PMIS-NNVTLLSLKKNKIHSLPDKVFIKYTKLKKIFLQHNCI 173
Query: 244 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 303
I + F GL L+ILYL+ N + ++ F L L L + N T ++ F GL
Sbjct: 174 RHISRKAFFGLCNLQILYLNHNCITTLRPGIFKDLHQLTWLILDDNPITRISQRLFTGLN 233
Query: 304 RLSALDLRGAGLTNMMGHSMALGDYLHWI 332
L L + L + A L+W+
Sbjct: 234 SLFFLSMVNNYLEALPKQMCAQMPQLNWV 262
>RGD|1566005 [details] [associations]
symbol:Flrt3 "fibronectin leucine rich transmembrane protein 3"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1566005 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 EMBL:CH473949 HOGENOM:HOG000290188 HOVERGEN:HBG051629
KO:K16362 CTD:23767 OMA:SPYRVCM OrthoDB:EOG4NCMCB EMBL:BC160843
IPI:IPI00368800 RefSeq:NP_001119763.1 UniGene:Rn.220263
ProteinModelPortal:B1H234 STRING:B1H234 PRIDE:B1H234
Ensembl:ENSRNOT00000006454 GeneID:366205 KEGG:rno:366205
UCSC:RGD:1566005 GeneTree:ENSGT00700000104442 NextBio:688953
Genevestigator:B1H234 Uniprot:B1H234
Length = 649
Score = 199 (75.1 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 63/181 (34%), Positives = 97/181 (53%)
Query: 136 PSIQRLVLKYNRIKTV---DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
P ++ L L N + V + A + + L+ + LS N L IP G P+ + EL+L+
Sbjct: 128 PYLEELHLDDNSVSAVSIEEGAFRDSNYLRLLFLSRNHLSTIP--GGLPRT-IEELRLDD 184
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLED--LPDRLFAPLSHLEELDLGQNRISRIDQAC 250
N++S++++ + GL SLK L L GN L + L D++F L +L EL L +N ++
Sbjct: 185 NRISTISSPSLHGLTSLKRLVLDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAAP-VN 243
Query: 251 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
G T+LR LYL DN + VP +F YL L L + N + L G F+ L ++ L L
Sbjct: 244 LPG-TSLRKLYLQDNHINRVPPNAFSYLRQLYRLDMSNNNLSNLPQGIFDDLDNITQLIL 302
Query: 311 R 311
R
Sbjct: 303 R 303
Score = 144 (55.7 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 60/227 (26%), Positives = 99/227 (43%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD--SAIQFYSSLQHV 164
CP C C + + C + +L IP+ + L L+ N+I V S ++ +Q +
Sbjct: 31 CPSVCRC--DAGFIYCNDRSLTSIPVGIPEDATTLYLQNNQINNVGIPSDLKNLLKVQRI 88
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE--DL 222
L HN L P P+ + EL L N + ++ + + L+ L+L N + +
Sbjct: 89 YLYHNSLDEFPTN--LPKY-VKELHLQENNIRTITYDSLSKIPYLEELHLDDNSVSAVSI 145
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F ++L L L +N +S I + LR LDDN++ ++ +PS L L
Sbjct: 146 EEGAFRDSNYLRLLFLSRNHLSTIPGGLPRTIEELR---LDDNRISTISSPSLHGLTSLK 202
Query: 283 ELRVGLNVFTT--LADGAFNGLGRLSALDLRGAGLT----NMMGHSM 323
L + N+ L D F L L+ L L LT N+ G S+
Sbjct: 203 RLVLDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAAPVNLPGTSL 249
Score = 125 (49.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 45/143 (31%), Positives = 69/143 (48%)
Query: 126 NLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPI--RGFEPQ 182
+L IP L +I+ L L NRI T+ S ++ +SL+ + L N L N + + F
Sbjct: 165 HLSTIPGGLPRTIEELRLDDNRISTISSPSLHGLTSLKRLVLDGNLLNNHGLGDKVFFNL 224
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
L EL L N L++ G SL+ L L+ N + +P F+ L L LD+ N
Sbjct: 225 VNLTELSLVRNSLTAAP-VNLPGT-SLRKLYLQDNHINRVPPNAFSYLRQLYRLDMSNNN 282
Query: 243 ISRIDQACFEGLTALRILYLDDN 265
+S + Q F+ L + L L +N
Sbjct: 283 LSNLPQGIFDDLDNITQLILRNN 305
>UNIPROTKB|Q14392 [details] [associations]
symbol:LRRC32 "Leucine-rich repeat-containing protein 32"
species:9606 "Homo sapiens" [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005887 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0046007 GO:GO:0050710 EMBL:Z24680
EMBL:BC052210 EMBL:BC070079 IPI:IPI00030280 PIR:S42799
RefSeq:NP_001122394.1 RefSeq:NP_005503.1 UniGene:Hs.151641
ProteinModelPortal:Q14392 SMR:Q14392 DIP:DIP-48932N STRING:Q14392
PhosphoSite:Q14392 DMDM:2498405 PaxDb:Q14392 PRIDE:Q14392
Ensembl:ENST00000260061 Ensembl:ENST00000404995
Ensembl:ENST00000407242 GeneID:2615 KEGG:hsa:2615 UCSC:uc001oxq.4
CTD:2615 GeneCards:GC11M076368 H-InvDB:HIX0036396 HGNC:HGNC:4161
MIM:137207 neXtProt:NX_Q14392 PharmGKB:PA28574 HOGENOM:HOG000113368
HOVERGEN:HBG052348 InParanoid:Q14392 OMA:CCGNGWL OrthoDB:EOG4DBTF0
PhylomeDB:Q14392 ChiTaRS:LRRC32 GenomeRNAi:2615 NextBio:10297
ArrayExpress:Q14392 Bgee:Q14392 CleanEx:HS_LRRC32
Genevestigator:Q14392 GermOnline:ENSG00000137507 Uniprot:Q14392
Length = 662
Score = 199 (75.1 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 67/186 (36%), Positives = 96/186 (51%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L YN I+ + DS ++ +SL ++LS N L R L+ L L+HN L ++
Sbjct: 320 LDLSYNEIELIPDSFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLSHNALETLE 379
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI---DQ----AC-- 250
L SL+ L L+GN L DLP FA L+ L+ L+L NR+S D+ C
Sbjct: 380 LGAR-ALGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCGGPDEPGPSGCVA 438
Query: 251 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL-GRLSALD 309
F G+T+LR L L DN++ + +F++ L EL + N +A GA GL L L
Sbjct: 439 FSGITSLRSLSLVDNEIELLRAGAFLHTP-LTELDLSSNPGLEVATGALGGLEASLEVLA 497
Query: 310 LRGAGL 315
L+G GL
Sbjct: 498 LQGNGL 503
Score = 197 (74.4 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 65/219 (29%), Positives = 106/219 (48%)
Query: 120 VTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRG 178
V+C+ L +P L P + L L N+++++ S + FY++L+H+DLS N++ +
Sbjct: 33 VSCQVLGLLQVPSVLPPDTETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGA 92
Query: 179 FEPQEKLVELQLNHNKLSSVNNKTFIGLKSL-KV--LNLRGNFL-EDLPDRLFAPLSHLE 234
F+ L L L HN+L+ + GL L +V L+L GN L L +RL L
Sbjct: 93 FQALTHLEHLSLAHNRLAMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLH 152
Query: 235 ELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 294
L L +N ++R+ + F + AL L L N L + +F L L L + N T +
Sbjct: 153 TLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSLTCI 212
Query: 295 ADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDY-LHWI 332
+D F+ L +L LDL + S ++ L W+
Sbjct: 213 SD--FS-LQQLRVLDLSCNSIEAFQTASQPQAEFQLTWL 248
Score = 152 (58.6 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 62/216 (28%), Positives = 95/216 (43%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEA-NLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYS 159
Q + PPD ETL ++ + ++ P+ +++ L L N I + A Q +
Sbjct: 42 QVPSVLPPDT----ETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALT 97
Query: 160 SLQHVDLSHNQLVN---IPIRGFEPQEKLVELQLNHNKLSSVNNKTFIG-LKSLKVLNLR 215
L+H+ L+HN+L + G P ++ L L+ N L S + +G SL L+L
Sbjct: 98 HLEHLSLAHNRLAMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLHTLSLA 157
Query: 216 GNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
N L L F + LE+LDL N + I+ FEGL L L L N L + S
Sbjct: 158 ENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNSLTCISDFSL 217
Query: 276 IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L +L + F T + +L+ LDLR
Sbjct: 218 QQLRVLDLSCNSIEAFQTASQPQAEF--QLTWLDLR 251
>FB|FBgn0005775 [details] [associations]
symbol:Con "Connectin" species:7227 "Drosophila melanogaster"
[GO:0044295 "axonal growth cone" evidence=IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA;TAS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=NAS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007413 "axonal
fasciculation" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886
GO:GO:0009986 EMBL:AE014296 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0031594 GO:GO:0007413 GO:GO:0007156 GO:GO:0044295 EMBL:M96647
EMBL:X68701 EMBL:AY119518 PIR:A43318 PIR:A49121
RefSeq:NP_001246635.1 RefSeq:NP_523930.3 UniGene:Dm.2557
ProteinModelPortal:Q01819 SMR:Q01819 STRING:Q01819 PaxDb:Q01819
GeneID:38590 KEGG:dme:Dmel_CG7503 UCSC:CG7503-RA CTD:38590
FlyBase:FBgn0005775 InParanoid:Q01819 OrthoDB:EOG49KD5V
GenomeRNAi:38590 NextBio:809410 Bgee:Q01819 GermOnline:CG7503
GO:GO:0016200 Uniprot:Q01819
Length = 682
Score = 199 (75.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 58/200 (29%), Positives = 99/200 (49%)
Query: 116 ETLVVTCKEANLDVIP-ITLNP--SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQL 171
E V A LD IP + + P ++ +V++Y++++ V S A L+ + L++N +
Sbjct: 151 ELKFVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHI 210
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+ + F +L EL L HN++ ++ F L + L L N + L + LFA ++
Sbjct: 211 MALDQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMA 270
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
L L+L N+I+ + F GL L +L L N L + F L L+EL + N
Sbjct: 271 RLTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRI 330
Query: 292 TTLADGAFNGLGRLSALDLR 311
+++ A +GL L L+LR
Sbjct: 331 ERISERALDGLNTLKTLNLR 350
Score = 172 (65.6 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 52/181 (28%), Positives = 88/181 (48%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L++N+I +D A + + + L++N + + F +L L L HN+++
Sbjct: 224 LRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQIN 283
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ ++ F GL +L VL L N L + D +FA L L EL+L NRI RI + +GL
Sbjct: 284 VLTSEIFRGLGNLNVLKLTRNNLNFIGDTVFAELWSLSELELDDNRIERISERALDGLNT 343
Query: 257 LRILYLDDNQLRSVP------TPSFIYLGMLAELRVGLNVFT--TLADGAFNGLGRLSAL 308
L+ L L +N L+ + TP+ + + + A L +T + D N L
Sbjct: 344 LKTLNLRNNLLKKIDNGLLRGTPALLSINVQANKLETLTFYTFQPIMDNLVNSTSELLVS 403
Query: 309 D 309
D
Sbjct: 404 D 404
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 203 (76.5 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L V+P + + L L N+ V + Y L +DL
Sbjct: 727 CPTECTCLDT--VVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDL 784
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 785 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 844
Query: 227 FAPLSHLEELDLGQN 241
F LS L L +G N
Sbjct: 845 FNDLSALSHLAIGAN 859
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C++ +V C+ L IP L +I + L+ N IK + A Y L+ +D
Sbjct: 273 CPAACTCSNN--IVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRID 330
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQ+ + F+ L L L NK++ + F GL SL++L L N + L
Sbjct: 331 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 390
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L A++ ++L N
Sbjct: 391 AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 430
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 51/186 (27%), Positives = 85/186 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV-- 164
CP C C+ T V C L +P + + +RL L N I + ++ L+H+
Sbjct: 28 CPAQCSCSGST--VDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRV 83
Query: 165 -DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L N++ I F+ ++L L+LN N L F+G L L+L N ++ +P
Sbjct: 84 LQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQIQAIP 143
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F ++ L L N+IS I+ F L L +L L++N + + SF ++ L
Sbjct: 144 RKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 203
Query: 284 LRVGLN 289
R+ N
Sbjct: 204 FRLHSN 209
Score = 179 (68.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 49/154 (31%), Positives = 73/154 (47%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL+ N + I F L LQL NK+S++ F LK L+ L L N L+
Sbjct: 58 ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQL 117
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
P+ LF + L LDL +N+I I + F G ++ L LD NQ+ + +F L L
Sbjct: 118 FPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDL 177
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L + N T L+ +FN + +L L L
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/167 (32%), Positives = 84/167 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP PQ EL+LN+N+ + + F L L+ +N N + D+
Sbjct: 517 VDCSNQKLNKIPEH--IPQYT-AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 573
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F S + E+ L NR+ + F+GL +L+ L L N++ V SFI L +
Sbjct: 574 EEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 633
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+A GAF+ L LS L+L A N + LG++L
Sbjct: 634 LLSLYDNQITTVAPGAFDTLHSLSTLNLL-ANPFNCNCYLAWLGEWL 679
Score = 167 (63.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 49/162 (30%), Positives = 76/162 (46%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--S 160
A CP C C T V C L+ IP + L L N +++ F
Sbjct: 502 ADLACPEKCRCEGTT--VDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQ 559
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++ S+N++ +I FE + E+ L N+L +V +K F GL+SLK L LR N +
Sbjct: 560 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT 619
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F LS + L L N+I+ + F+ L +L L L
Sbjct: 620 CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNL 661
Score = 164 (62.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 42/132 (31%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + IP F P +KL + L++N++S + F GL+SL L L GN +
Sbjct: 301 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 360
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+LP LF L L+ L L N+I+ + F+ L L +L L DN+L+++ +F L
Sbjct: 361 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 420
Query: 280 MLAELRVGLNVF 291
+ + + N F
Sbjct: 421 AIQTMHLAQNPF 432
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 39/131 (29%), Positives = 62/131 (47%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L LN N ++ + F GL+ L+VL L N + + F L LE L L +N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F G L L L +NQ++++P +F + L++ N + + DGAF L L
Sbjct: 120 ELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 179
Query: 308 LDLRGAGLTNM 318
L L +T +
Sbjct: 180 LTLNNNNITRL 190
Score = 147 (56.8 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 42/128 (32%), Positives = 59/128 (46%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I T++ A Q L+ + L+ N L P F KL L L+ N++ ++
Sbjct: 84 LQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLSENQIQAIP 143
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G +K L L N + + D F L LE L L N I+R+ A F + LR
Sbjct: 144 RKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 203
Query: 260 LYLDDNQL 267
L N L
Sbjct: 204 FRLHSNNL 211
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E + E++L N + + F K L+ ++L N + +L
Sbjct: 284 VDCRGKGLTEIPTN--LP-ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELA 340
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + ++ FEGL +L++L L+ N++ + +F L L
Sbjct: 341 PDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 400
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL-RGAGLTNMMGHSMALGDYLH 330
L + N T+A G F+ L + + L + + + H L DYLH
Sbjct: 401 LSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC--HLKWLADYLH 446
Score = 129 (50.5 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L+ N+ + V K K L +++L N + L
Sbjct: 738 VRCSNKGLKVLP-KGI-PRD-VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLS 793
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
++ F+ ++ L L L NR+ I F+GL +LR+L L N + VP +F L L+
Sbjct: 794 NQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSH 853
Query: 284 LRVGLN 289
L +G N
Sbjct: 854 LAIGAN 859
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 38/102 (37%), Positives = 51/102 (50%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L L GN +P L + HL +DL NRIS + F +T L L L N+LR +P
Sbjct: 759 LYLDGNQFTLVPKEL-SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 817
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+F L L L + N + + +GAFN L LS L + GA
Sbjct: 818 PRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI-GA 858
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++++ N+I ++ A + S + + L+ N+L N+ + F+ E L L L N+
Sbjct: 558 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 617
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
++ V N +FIGL S+++L+L N + + F L L L+L N
Sbjct: 618 ITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 664
>UNIPROTKB|Q2KIF2 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein 1"
species:9913 "Bos taurus" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005615 CTD:116844 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 OMA:RCAGPEA OrthoDB:EOG4TMR2P GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GeneTree:ENSGT00690000102197 EMBL:DAAA02019605 EMBL:BC112660
IPI:IPI00702820 RefSeq:NP_001039642.1 UniGene:Bt.53757
Ensembl:ENSBTAT00000003618 GeneID:514663 KEGG:bta:514663
InParanoid:Q2KIF2 NextBio:20871452 Uniprot:Q2KIF2
Length = 346
Score = 193 (73.0 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 53/152 (34%), Positives = 86/152 (56%)
Query: 141 LVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
LVLK N++K ++++ + +L+H+DLS NQL ++P E L+ L L++N+L ++
Sbjct: 144 LVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLP 203
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
G +L+ L+L GN L+ L + L AP L L L NR++ + F GL L +
Sbjct: 204 PDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGAFRGLQKLDM 263
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAE-LRVGLNV 290
L L +N L +VPT + LG A L+ G ++
Sbjct: 264 LDLSNNLLTTVPTGLWTSLGKAARNLKDGFDI 295
Score = 161 (61.7 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 58/207 (28%), Positives = 90/207 (43%)
Query: 116 ETLVVTCKEANLDVIPITLN---PSIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQL 171
+T+ + + NL +P P++Q L L NR++ L+ +DL+ N L
Sbjct: 68 DTIFLAVEFFNLTQLPADFLQGVPNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSL 127
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+ F L L L N+L + GLK+L+ L+L N L LP L +
Sbjct: 128 TGLFPGFFRVSAALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFT 187
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
L LDL N++ + G L L+L+ N+L+ + L L + N
Sbjct: 188 DLLTLDLSNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRL 247
Query: 292 TTLADGAFNGLGRLSALDLRGAGLTNM 318
++A GAF GL +L LDL LT +
Sbjct: 248 ASVAAGAFRGLQKLDMLDLSNNLLTTV 274
>UNIPROTKB|F1NR89 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0010596 GO:GO:0001933 GO:GO:0071676 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0070100
GO:GO:0090288 GO:GO:0045499 Pfam:PF01463 GO:GO:0010593
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050929
GO:GO:0090024 GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00821752 Ensembl:ENSGALT00000037322 ArrayExpress:F1NR89
Uniprot:F1NR89
Length = 870
Score = 200 (75.5 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 45/135 (33%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L +P + + L L N+ V + Y L +DL
Sbjct: 68 CPAECTCLDT--VVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 125
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 126 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGA 185
Query: 227 FAPLSHLEELDLGQN 241
F LS L L +G N
Sbjct: 186 FNDLSALSHLAIGAN 200
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 39/107 (36%), Positives = 53/107 (49%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN +P L + HL +DL NRIS + F +T L L L N+
Sbjct: 95 KDVTELYLDGNQFTLVPKEL-SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 153
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
LR +P +F L L L + N + + +GAFN L LS L + GA
Sbjct: 154 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI-GA 199
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L+ N+ + V K K L +++L N + L
Sbjct: 79 VRCSNKGLKALP-KGI-PKD-VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLS 134
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
++ F+ ++ L L L NR+ I F+GL +LR+L L N + VP +F L L+
Sbjct: 135 NQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSH 194
Query: 284 LRVGLN 289
L +G N
Sbjct: 195 LAIGAN 200
>UNIPROTKB|F1NHS1 [details] [associations]
symbol:F1NHS1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02046435 EMBL:AADN02046436
EMBL:AADN02046437 EMBL:AADN02046438 EMBL:AADN02046439
EMBL:AADN02046440 EMBL:AADN02046441 EMBL:AADN02046442
IPI:IPI00597520 ProteinModelPortal:F1NHS1
Ensembl:ENSGALT00000039424 Uniprot:F1NHS1
Length = 738
Score = 199 (75.1 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 44/135 (32%), Positives = 72/135 (53%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L +P + ++ L L N+ V + + LQ VDL
Sbjct: 144 CPQECTCLDT--VVRCSNKHLKALPRGIPKNVTELYLDGNQFTQVPGQLSTFKYLQLVDL 201
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + LP+ +
Sbjct: 202 SNNRISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHGNDISTLPEGI 261
Query: 227 FAPLSHLEELDLGQN 241
FA ++ L L +G N
Sbjct: 262 FADVTSLSHLAIGAN 276
Score = 127 (49.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 39/126 (30%), Positives = 63/126 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P RG P+ + EL L+ N+ + V + K L++++L N + L
Sbjct: 155 VRCSNKHLKALP-RGI-PKN-VTELYLDGNQFTQVPGQLST-FKYLQLVDLSNNRISSLS 210
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F +S L L L N + I FEGL +LR+L L N + ++P F + L+
Sbjct: 211 NSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHGNDISTLPEGIFADVTSLSH 270
Query: 284 LRVGLN 289
L +G N
Sbjct: 271 LAIGAN 276
Score = 115 (45.5 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 35/107 (32%), Positives = 55/107 (51%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K++ L L GN +P +L + +L+ +DL NRIS + + F ++ L L L N
Sbjct: 171 KNVTELYLDGNQFTQVPGQL-STFKYLQLVDLSNNRISSLSNSSFTNMSQLTTLILSYNS 229
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ +P +F L L L + N +TL +G F + LS L + GA
Sbjct: 230 LQCIPPLAFEGLRSLRLLSLHGNDISTLPEGIFADVTSLSHLAI-GA 275
Score = 54 (24.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 141 LVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSV 198
L L N+I+++ F S ++Q + L +N++ I F + L L N++S++
Sbjct: 4 LSLYDNKIQSLAKGT-FTSLRAIQTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTI 62
Query: 199 NNKTFIGLKSLKVLNLRGN 217
F L+SL LNL N
Sbjct: 63 APGAFDTLQSLSTLNLLAN 81
>MGI|MGI:2182081 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2182081
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:AF300458 EMBL:DQ177325 EMBL:BC117834 IPI:IPI00169875
RefSeq:NP_619623.2 UniGene:Mm.443660 ProteinModelPortal:Q99PH1
SMR:Q99PH1 DIP:DIP-46449N STRING:Q99PH1 PhosphoSite:Q99PH1
PRIDE:Q99PH1 Ensembl:ENSMUST00000062304 GeneID:192198
KEGG:mmu:192198 UCSC:uc009bcu.1 InParanoid:Q149E5 NextBio:371238
Bgee:Q99PH1 CleanEx:MM_LRRC4 Genevestigator:Q99PH1
GermOnline:ENSMUSG00000049939 Uniprot:Q99PH1
Length = 652
Score = 198 (74.8 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 58/204 (28%), Positives = 96/204 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CP C C+++ V C L +P + + + L L N I+ + + + L+ +
Sbjct: 45 CPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQ 104
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N + I + F L L+L N L+ + + F L L+ L LR N +E +P
Sbjct: 105 LGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSY 164
Query: 226 LFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
F + L LDLG+ ++ I + FEGL L+ L L ++ +P + + +G L EL
Sbjct: 165 AFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPL-VG-LEEL 222
Query: 285 RVGLNVFTTLADGAFNGLGRLSAL 308
+ N F + G+F+GL L L
Sbjct: 223 EMSGNHFPEIRPGSFHGLSSLKKL 246
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 54/176 (30%), Positives = 87/176 (49%)
Query: 137 SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH-NK 194
S+ L L N + + S A ++ S L+ + L +N + +IP F L+ L L K
Sbjct: 123 SLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKK 182
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ F GL +LK LNL ++D+P+ PL LEEL++ N I F GL
Sbjct: 183 LEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLEELEMSGNHFPEIRPGSFHGL 240
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
++L+ L++ ++Q+ + +F L L EL + N ++L F L L L L
Sbjct: 241 SSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHL 296
Score = 154 (59.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 41/107 (38%), Positives = 57/107 (53%)
Query: 205 GLKS-LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLD 263
G+ S + LNL N ++ + F L HLE L LG+N I +I+ F GL +L L L
Sbjct: 71 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 130
Query: 264 DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
DN L +P+ +F YL L EL + N ++ AFN + L LDL
Sbjct: 131 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 177
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 42/132 (31%), Positives = 66/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + TF L L+VL L N + + F L+ L L+L N ++ I
Sbjct: 79 LNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIP 138
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L +++GAF GL L
Sbjct: 139 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 198
Query: 307 ALDLRGAGLTNM 318
L+L + +M
Sbjct: 199 YLNLGMCNIKDM 210
Score = 136 (52.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 55/184 (29%), Positives = 85/184 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N I+ ++ A +SL ++L N L IP FE KL EL L +N +
Sbjct: 100 LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 159
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL L+L G LE + + F L +L+ L+LG I D L
Sbjct: 160 SIPSYAFNRVPSLMRLDL-GELKKLEYISEGAFEGLFNLKYLNLGMCNIK--DMPNLTPL 216
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L + N + SF L L +L V + + + AF+GL L L+L
Sbjct: 217 VGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNN 276
Query: 315 LTNM 318
L+++
Sbjct: 277 LSSL 280
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N I+++ S A SL +DL +L I FE L L L +
Sbjct: 148 LRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 207
Query: 196 SSVNNKT-FIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ N T +GL+ L+ + GN ++ F LS L++L + +++S I++ F+GL
Sbjct: 208 KDMPNLTPLVGLEELE---MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGL 264
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+L L L N L S+P F L L EL + N
Sbjct: 265 ASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 299
>UNIPROTKB|Q9HBW1 [details] [associations]
symbol:LRRC4 "Leucine-rich repeat-containing protein 4"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH236947
MEROPS:I43.001 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AF196976 EMBL:AJ297858 EMBL:AY358307
EMBL:AK172751 EMBL:AK314047 EMBL:BC111561 EMBL:BC111745
IPI:IPI00005516 RefSeq:NP_071426.1 UniGene:Hs.655003 PDB:2DL9
PDB:3ZYI PDBsum:2DL9 PDBsum:3ZYI ProteinModelPortal:Q9HBW1
SMR:Q9HBW1 STRING:Q9HBW1 PhosphoSite:Q9HBW1 DMDM:51701696
PaxDb:Q9HBW1 PRIDE:Q9HBW1 Ensembl:ENST00000249363 GeneID:64101
KEGG:hsa:64101 UCSC:uc003vmk.3 CTD:64101 GeneCards:GC07M127667
HGNC:HGNC:15586 MIM:610486 neXtProt:NX_Q9HBW1 PharmGKB:PA30463
InParanoid:Q9HBW1 KO:K16351 OMA:CGCEAVW OrthoDB:EOG4NGGM6
PhylomeDB:Q9HBW1 EvolutionaryTrace:Q9HBW1 GenomeRNAi:64101
NextBio:65940 ArrayExpress:Q9HBW1 Bgee:Q9HBW1 CleanEx:HS_LRRC4
Genevestigator:Q9HBW1 GermOnline:ENSG00000128594 InterPro:IPR026882
PANTHER:PTHR24369:SF9 Uniprot:Q9HBW1
Length = 653
Score = 198 (74.8 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 58/204 (28%), Positives = 96/204 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CP C C+++ V C L +P + + + L L N I+ + + + L+ +
Sbjct: 46 CPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQ 105
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N + I + F L L+L N L+ + + F L L+ L LR N +E +P
Sbjct: 106 LGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSY 165
Query: 226 LFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
F + L LDLG+ ++ I + FEGL L+ L L ++ +P + + +G L EL
Sbjct: 166 AFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPL-VG-LEEL 223
Query: 285 RVGLNVFTTLADGAFNGLGRLSAL 308
+ N F + G+F+GL L L
Sbjct: 224 EMSGNHFPEIRPGSFHGLSSLKKL 247
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 54/176 (30%), Positives = 87/176 (49%)
Query: 137 SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH-NK 194
S+ L L N + + S A ++ S L+ + L +N + +IP F L+ L L K
Sbjct: 124 SLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKK 183
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ F GL +LK LNL ++D+P+ PL LEEL++ N I F GL
Sbjct: 184 LEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLEELEMSGNHFPEIRPGSFHGL 241
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
++L+ L++ ++Q+ + +F L L EL + N ++L F L L L L
Sbjct: 242 SSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHL 297
Score = 154 (59.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 41/107 (38%), Positives = 57/107 (53%)
Query: 205 GLKS-LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLD 263
G+ S + LNL N ++ + F L HLE L LG+N I +I+ F GL +L L L
Sbjct: 72 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131
Query: 264 DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
DN L +P+ +F YL L EL + N ++ AFN + L LDL
Sbjct: 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 42/132 (31%), Positives = 66/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + TF L L+VL L N + + F L+ L L+L N ++ I
Sbjct: 80 LNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIP 139
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L +++GAF GL L
Sbjct: 140 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 199
Query: 307 ALDLRGAGLTNM 318
L+L + +M
Sbjct: 200 YLNLGMCNIKDM 211
Score = 136 (52.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 55/184 (29%), Positives = 85/184 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N I+ ++ A +SL ++L N L IP FE KL EL L +N +
Sbjct: 101 LEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 160
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL L+L G LE + + F L +L+ L+LG I D L
Sbjct: 161 SIPSYAFNRVPSLMRLDL-GELKKLEYISEGAFEGLFNLKYLNLGMCNIK--DMPNLTPL 217
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L + N + SF L L +L V + + + AF+GL L L+L
Sbjct: 218 VGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNN 277
Query: 315 LTNM 318
L+++
Sbjct: 278 LSSL 281
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N I+++ S A SL +DL +L I FE L L L +
Sbjct: 149 LRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 208
Query: 196 SSVNNKT-FIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ N T +GL+ L+ + GN ++ F LS L++L + +++S I++ F+GL
Sbjct: 209 KDMPNLTPLVGLEELE---MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGL 265
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+L L L N L S+P F L L EL + N
Sbjct: 266 ASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
>UNIPROTKB|Q5R7M3 [details] [associations]
symbol:AMIGO2 "Amphoterin-induced protein 2" species:9601
"Pongo abelii" [GO:0007156 "homophilic cell adhesion" evidence=ISS]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=ISS]
[GO:0043069 "negative regulation of programmed cell death"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG080231
GO:GO:0007156 EMBL:CR860091 UniGene:Pab.11604
ProteinModelPortal:Q5R7M3 PRIDE:Q5R7M3 InParanoid:Q5R7M3
Uniprot:Q5R7M3
Length = 522
Score = 196 (74.1 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 59/174 (33%), Positives = 87/174 (50%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQF-YSS 160
AS CP C C T +V+C +L +P L ++RL L YNRI +DS I ++
Sbjct: 37 ASGVCPTACIC--ATDIVSCTNKHLSKVPGNLFRLMKRLDLSYNRIGLLDSEWIPVSFAK 94
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L + L HN + +I F L L L+ NKL +V N F LK L+VL L N +
Sbjct: 95 LNTLILRHNNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHIS 154
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL-RILYLDD--NQLRSVP 271
L F LS L++L L N +++ + G L +++LD N++ S+P
Sbjct: 155 YLDPSAFGGLSQLQKLYLSGNFLTQFPMDLYVGRFKLAELMFLDVSYNRIPSMP 208
Score = 151 (58.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQ-EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ +DLS+N++ + KL L L HN ++S++ +F +LK L+L N L
Sbjct: 70 MKRLDLSYNRIGLLDSEWIPVSFAKLNTLILRHNNITSISTGSFSTTPNLKCLDLSSNKL 129
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+ + + +F L LE L L N IS +D + F GL+ L+ LYL N L P ++
Sbjct: 130 KTVKNAVFQELKVLEVLLLYNNHISYLDPSAFGGLSQLQKLYLSGNFLTQFPMDLYVGRF 189
Query: 280 MLAEL 284
LAEL
Sbjct: 190 KLAEL 194
>UNIPROTKB|Q5XM32 [details] [associations]
symbol:RXFP2 "Relaxin receptor 2" species:9615 "Canis lupus
familiaris" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0008584 "male
gonad development" evidence=IEA] [GO:0007189 "adenylate
cyclase-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 GO:GO:0016021 GO:GO:0005886
GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0008584 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
HOVERGEN:HBG026354 HOGENOM:HOG000049056 EMBL:AY749634
RefSeq:NP_001005870.1 UniGene:Cfa.16241 ProteinModelPortal:Q5XM32
SMR:Q5XM32 STRING:Q5XM32 GeneID:450220 KEGG:cfa:450220 CTD:122042
InParanoid:Q5XM32 KO:K04307 OrthoDB:EOG47M1XF NextBio:20833171
Uniprot:Q5XM32
Length = 737
Score = 198 (74.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 57/201 (28%), Positives = 100/201 (49%)
Query: 114 NDETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHN 169
+ T +++ K+ + +P T ++++ L++N I + F +LQ + LSHN
Sbjct: 119 SSNTTLLSLKKNKIHSLPDKVFTKYTQLKQIFLQHNCITHISRKAFFGLHNLQILYLSHN 178
Query: 170 QLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAP 229
+ + F+ +L L L+ N ++ ++ + F GLKSL L++ N+LE LP ++ A
Sbjct: 179 CITTLRPGVFKDLHQLTWLILDDNPITRISQQLFTGLKSLFFLSMVNNYLEALPKQMCAQ 238
Query: 230 LSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+ L +DL N I + + F +L +L+L NQ+ VP +F L L EL + N
Sbjct: 239 MPQLNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSN 298
Query: 290 VFTTLADGAFNGLGRLSALDL 310
+ L F L L L+L
Sbjct: 299 MIMELPPEIFKDLKLLQKLNL 319
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 46/183 (25%), Positives = 81/183 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L +N I T+ + + L + L N + I + F + L L + +N L
Sbjct: 169 NLQILYLSHNCITTLRPGVFKDLHQLTWLILDDNPITRISQQLFTGLKSLFFLSMVNNYL 228
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + + L ++L GN ++ L + F + L L L +N+I + + F L
Sbjct: 229 EALPKQMCAQMPQLNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLK 288
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N + +P F L +L +L + N L F L +L +LDL +
Sbjct: 289 NLGELDLSSNMIMELPPEIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIEI 348
Query: 316 TNM 318
N+
Sbjct: 349 PNI 351
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L +DL N + + F L L L N++ V KTF LK+L L+L N +
Sbjct: 242 LNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNMIM 301
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
+LP +F L L++L+L N + + + FE L L+ L L+ ++ ++ T F
Sbjct: 302 ELPPEIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIEIPNINTRMF 356
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 211 VLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSV 270
+L+L+ N + LPD++F + L+++ L N I+ I + F GL L+ILYL N + ++
Sbjct: 124 LLSLKKNKIHSLPDKVFTKYTQLKQIFLQHNCITHISRKAFFGLHNLQILYLSHNCITTL 183
Query: 271 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYLH 330
F L L L + N T ++ F GL L L + L + A L+
Sbjct: 184 RPGVFKDLHQLTWLILDDNPITRISQQLFTGLKSLFFLSMVNNYLEALPKQMCAQMPQLN 243
Query: 331 WI 332
W+
Sbjct: 244 WM 245
Score = 118 (46.6 bits), Expect = 0.00064, P = 0.00064
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + + L+ N IK + +S+ +SL + L NQ+ +P + F + L EL L+ N
Sbjct: 240 PQLNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNM 299
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ + + F LK L+ LNL N L L F L L+ LDL + I I+ F+ +
Sbjct: 300 IMELPPEIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIEIPNINTRMFQPM 359
Query: 255 TALRILY 261
L +Y
Sbjct: 360 MNLSHIY 366
>UNIPROTKB|F1PY08 [details] [associations]
symbol:RXFP2 "Relaxin receptor 2" species:9615 "Canis lupus
familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00650000093266
OMA:KILCCAD EMBL:AAEX03014219 Ensembl:ENSCAFT00000010501
Uniprot:F1PY08
Length = 751
Score = 198 (74.8 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 57/201 (28%), Positives = 100/201 (49%)
Query: 114 NDETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHN 169
+ T +++ K+ + +P T ++++ L++N I + F +LQ + LSHN
Sbjct: 133 SSNTTLLSLKKNKIHSLPDKVFTKYTQLKQIFLQHNCITHISRKAFFGLHNLQILYLSHN 192
Query: 170 QLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAP 229
+ + F+ +L L L+ N ++ ++ + F GLKSL L++ N+LE LP ++ A
Sbjct: 193 CITTLRPGVFKDLHQLTWLILDDNPITRISQQLFTGLKSLFFLSMVNNYLEALPKQMCAQ 252
Query: 230 LSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+ L +DL N I + + F +L +L+L NQ+ VP +F L L EL + N
Sbjct: 253 MPQLNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSN 312
Query: 290 VFTTLADGAFNGLGRLSALDL 310
+ L F L L L+L
Sbjct: 313 MIMELPPEIFKDLKLLQKLNL 333
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 46/183 (25%), Positives = 81/183 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L +N I T+ + + L + L N + I + F + L L + +N L
Sbjct: 183 NLQILYLSHNCITTLRPGVFKDLHQLTWLILDDNPITRISQQLFTGLKSLFFLSMVNNYL 242
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + + L ++L GN ++ L + F + L L L +N+I + + F L
Sbjct: 243 EALPKQMCAQMPQLNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLK 302
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N + +P F L +L +L + N L F L +L +LDL +
Sbjct: 303 NLGELDLSSNMIMELPPEIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIEI 362
Query: 316 TNM 318
N+
Sbjct: 363 PNI 365
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L +DL N + + F L L L N++ V KTF LK+L L+L N +
Sbjct: 256 LNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNMIM 315
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
+LP +F L L++L+L N + + + FE L L+ L L+ ++ ++ T F
Sbjct: 316 ELPPEIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIEIPNINTRMF 370
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 211 VLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSV 270
+L+L+ N + LPD++F + L+++ L N I+ I + F GL L+ILYL N + ++
Sbjct: 138 LLSLKKNKIHSLPDKVFTKYTQLKQIFLQHNCITHISRKAFFGLHNLQILYLSHNCITTL 197
Query: 271 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYLH 330
F L L L + N T ++ F GL L L + L + A L+
Sbjct: 198 RPGVFKDLHQLTWLILDDNPITRISQQLFTGLKSLFFLSMVNNYLEALPKQMCAQMPQLN 257
Query: 331 WI 332
W+
Sbjct: 258 WM 259
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + + L+ N IK + +S+ +SL + L NQ+ +P + F + L EL L+ N
Sbjct: 254 PQLNWMDLEGNGIKYLTNSSFLSCNSLTVLFLPRNQIDFVPEKTFSSLKNLGELDLSSNM 313
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ + + F LK L+ LNL N L L F L L+ LDL + I I+ F+ +
Sbjct: 314 IMELPPEIFKDLKLLQKLNLSSNPLLYLHKNQFESLKQLQSLDLERIEIPNINTRMFQPM 373
Query: 255 TALRILY 261
L +Y
Sbjct: 374 MNLSHIY 380
>RGD|1560026 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1560026 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:DQ119102 IPI:IPI00197050 RefSeq:NP_001032413.1
UniGene:Rn.198672 ProteinModelPortal:Q45R42 SMR:Q45R42 PRIDE:Q45R42
Ensembl:ENSRNOT00000010673 GeneID:641521 KEGG:rno:641521
UCSC:RGD:1560026 InParanoid:Q45R42 NextBio:714703
Genevestigator:Q45R42 Uniprot:Q45R42
Length = 652
Score = 197 (74.4 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 58/204 (28%), Positives = 96/204 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVD 165
CP C C+++ V C L +P + + + L L N I+ + + + L+ +
Sbjct: 45 CPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQ 104
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N + I + F L L+L N L+ + + F L L+ L LR N +E +P
Sbjct: 105 LGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSY 164
Query: 226 LFAPLSHLEELDLGQ-NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
F + L LDLG+ ++ I + FEGL L+ L L ++ +P + + +G L EL
Sbjct: 165 AFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPL-VG-LEEL 222
Query: 285 RVGLNVFTTLADGAFNGLGRLSAL 308
+ N F + G+F+GL L L
Sbjct: 223 EMSGNHFPEIRPGSFHGLSSLKKL 246
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 54/176 (30%), Positives = 87/176 (49%)
Query: 137 SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH-NK 194
S+ L L N + + S A ++ S L+ + L +N + +IP F L+ L L K
Sbjct: 123 SLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKK 182
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ F GL +LK LNL ++D+P+ PL LEEL++ N I F GL
Sbjct: 183 LEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLEELEMSGNHFPEIRPGSFHGL 240
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
++L+ L++ ++Q+ + +F L L EL + N ++L F L L L L
Sbjct: 241 SSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHL 296
Score = 154 (59.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 41/107 (38%), Positives = 57/107 (53%)
Query: 205 GLKS-LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLD 263
G+ S + LNL N ++ + F L HLE L LG+N I +I+ F GL +L L L
Sbjct: 71 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELF 130
Query: 264 DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
DN L +P+ +F YL L EL + N ++ AFN + L LDL
Sbjct: 131 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 177
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 42/132 (31%), Positives = 66/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L N + + TF L L+VL L N + + F L+ L L+L N ++ I
Sbjct: 79 LNLMENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIP 138
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLS 306
FE L+ LR L+L +N + S+P+ +F + L L +G L +++GAF GL L
Sbjct: 139 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 198
Query: 307 ALDLRGAGLTNM 318
L+L + +M
Sbjct: 199 YLNLGMCNIKDM 210
Score = 136 (52.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 55/184 (29%), Positives = 85/184 (46%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N I+ ++ A +SL ++L N L IP FE KL EL L +N +
Sbjct: 100 LEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 159
Query: 197 SVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + F + SL L+L G LE + + F L +L+ L+LG I D L
Sbjct: 160 SIPSYAFNRVPSLMRLDL-GELKKLEYISEGAFEGLFNLKYLNLGMCNIK--DMPNLTPL 216
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L + N + SF L L +L V + + + AF+GL L L+L
Sbjct: 217 VGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNN 276
Query: 315 LTNM 318
L+++
Sbjct: 277 LSSL 280
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L+ N I+++ S A SL +DL +L I FE L L L +
Sbjct: 148 LRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 207
Query: 196 SSVNNKT-FIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ N T +GL+ L+ + GN ++ F LS L++L + +++S I++ F+GL
Sbjct: 208 KDMPNLTPLVGLEELE---MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGL 264
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
+L L L N L S+P F L L EL + N
Sbjct: 265 ASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 299
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 196 (74.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 55/171 (32%), Positives = 89/171 (52%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L ++ N + + A + SL+++ L++N+L +PI F+ + L L L+ N+L +
Sbjct: 82 LRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQ 141
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F +LK L L GN LE +PD F L L +L+LG+N ++ I F+ L L++
Sbjct: 142 PAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQV 201
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L +N+L +P +F L L EL + N L+ G F+ L L L
Sbjct: 202 LRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYL 252
Score = 190 (71.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 59/186 (31%), Positives = 90/186 (48%)
Query: 127 LDVIPITLNP---SIQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQ 182
L V+PI L S++ L+L N++ + A S+L+ + L N L IP F+
Sbjct: 113 LQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHL 172
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
L +L L N L+ ++ + F L +L+VL L N L D+P F L +L+EL L QN+
Sbjct: 173 VGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQ 232
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I + F L+ LYL +N + +P F+ L L L + N L+ G F +
Sbjct: 233 IGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPM 292
Query: 303 GRLSAL 308
L L
Sbjct: 293 PNLREL 298
Score = 188 (71.2 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 55/185 (29%), Positives = 87/185 (47%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ +L L N + + + Q +LQ + L N+L +IP+ F+ L EL L N++
Sbjct: 175 LTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIG 234
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ F +L+ L L N + LP +F L L L L N + + F +
Sbjct: 235 LLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPN 294
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
LR L+L DN + S+P F L L L + N + ++ GAFNGL L L L L
Sbjct: 295 LRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQ 354
Query: 317 NMMGH 321
++ G+
Sbjct: 355 DLDGN 359
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 48/153 (31%), Positives = 81/153 (52%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQF--YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
P + RL L N +K + I F +L+ + L N + ++P F +L L L+ N
Sbjct: 269 PQLNRLTLFGNSLKELSPGI-FGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRN 327
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
++S ++ F GL L+ L+L N L+DL +F L++L+ + L NR+ ++ F
Sbjct: 328 QISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFAN 387
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
+ L + L +NQL ++P F +LG L ELR+
Sbjct: 388 VNGLMAIQLQNNQLENLPLGIFDHLGKLCELRL 420
Score = 184 (69.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 63/206 (30%), Positives = 91/206 (44%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVD 165
CP +C C+ + V C A + +P L + L + I + +S S+L +
Sbjct: 25 CPSECTCSRASQV-ECTGARIVAVPTPLPWNAMSLQILNTHITELNESPFLNISALIALR 83
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
+ N+L I F L L L +NKL + F GL SL+ L L N L +
Sbjct: 84 IEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPA 143
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F+ S+L+EL L N + I F+ L L L L N L + F +LG L LR
Sbjct: 144 HFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLR 203
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLR 311
+ N T + G F+GL L L L+
Sbjct: 204 LYENRLTDIPMGTFDGLVNLQELALQ 229
Score = 180 (68.4 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 56/184 (30%), Positives = 89/184 (48%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSS--LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
++Q L L+ N+I + + F+++ LQ + LS+N + +P F +L L L N
Sbjct: 222 NLQELALQQNQIGLLSPGL-FHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNS 280
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ F + +L+ L L N + LPD +F+ L L+ L L +N+IS I F GL
Sbjct: 281 LKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGL 340
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
T LR L L N L+ + F L L + + N L F + L A+ L+
Sbjct: 341 TELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQ 400
Query: 315 LTNM 318
L N+
Sbjct: 401 LENL 404
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/189 (29%), Positives = 84/189 (44%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L NR+ + +LQ + L NQ+ + F L L L++N +
Sbjct: 198 NLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHI 257
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S + F+ L L L L GN L++L +F P+ +L EL L N IS + F L
Sbjct: 258 SQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLR 317
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L++L L NQ+ + +F L L EL + N L F L L + L+ L
Sbjct: 318 QLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRL 377
Query: 316 TNMMGHSMA 324
+ G+ A
Sbjct: 378 RQLPGNIFA 386
Score = 174 (66.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 57/176 (32%), Positives = 86/176 (48%)
Query: 147 RIKTVDSAIQFYS-SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIG 205
RI V + + + + SLQ ++ +L P L+ L++ N+LS + F
Sbjct: 43 RIVAVPTPLPWNAMSLQILNTHITELNESPFLNISA---LIALRIEKNELSRITPGAFRN 99
Query: 206 LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
L SL+ L+L N L+ LP LF L LE L L N++ +I A F + L+ L L N
Sbjct: 100 LGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGN 159
Query: 266 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MG 320
L +P +F +L L +L +G N T ++ F LG L L L LT++ MG
Sbjct: 160 HLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMG 215
Score = 174 (66.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 58/183 (31%), Positives = 87/183 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L N+++ + + Q SL+ + LS NQL+ I F L ELQL+ N L
Sbjct: 102 SLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHL 161
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + F L L LNL N L + R+F L +L+ L L +NR++ I F+GL
Sbjct: 162 EYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLV 221
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L+ L L NQ+ + F L L + N + L F L +L+ L L G L
Sbjct: 222 NLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSL 281
Query: 316 TNM 318
+
Sbjct: 282 KEL 284
Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 57/198 (28%), Positives = 95/198 (47%)
Query: 116 ETLVVTCKEANLDVIPITLNP--SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLV 172
E+L+++ + L + P + +++ L L N ++ + D A L ++L N L
Sbjct: 128 ESLLLSSNQL-LQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLT 186
Query: 173 NIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSH 232
+I R F+ L L+L N+L+ + TF GL +L+ L L+ N + L LF +
Sbjct: 187 HISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHN 246
Query: 233 LEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 292
L+ L L N IS++ + F L L L L N L+ + F + L EL + N +
Sbjct: 247 LQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHIS 306
Query: 293 TLADGAFNGLGRLSALDL 310
+L D F+ L +L L L
Sbjct: 307 SLPDNVFSNLRQLQVLIL 324
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P+++ L L N I ++ D+ LQ + LS NQ+ I F +L EL L+ N
Sbjct: 293 PNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNA 352
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ F L +L+ ++L+ N L LP +FA ++ L + L N++ + F+ L
Sbjct: 353 LQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDHL 412
Query: 255 TALRILYLDDNQLR 268
L L L DN R
Sbjct: 413 GKLCELRLYDNPWR 426
>UNIPROTKB|F1S5C4 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:CU929485
Ensembl:ENSSSCT00000009572 OMA:XVETIND Uniprot:F1S5C4
Length = 1045
Score = 199 (75.1 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L V+P + + L L N+ V + Y L +DL
Sbjct: 240 CPTECTCLDT--VVRCSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDL 297
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 298 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCLPPRTFDGLKSLRLLSLHGNDISVVPEGA 357
Query: 227 FAPLSHLEELDLGQN 241
F LS L L +G N
Sbjct: 358 FNDLSALSHLAIGAN 372
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 54/167 (32%), Positives = 84/167 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP PQ EL+LN+N+ + + F L L+ +N N + D+
Sbjct: 30 VDCSNQKLSKIP--DHIPQYT-AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 86
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F S + E+ L NR+ + F+GL +L+ L + N++ V SFI L +
Sbjct: 87 EEGAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNRISCVGNDSFIGLSSVR 146
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+A GAF+ L LS L+L A N + LG++L
Sbjct: 147 LLSLYDNQITTIAPGAFDTLHSLSTLNLL-ANPFNCNCYLAWLGEWL 192
Score = 165 (63.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 49/162 (30%), Positives = 75/162 (46%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--S 160
A CP C C T V C L IP + L L N +++ F
Sbjct: 15 ADLACPEKCRCEGTT--VDCSNQKLSKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQ 72
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++ S+N++ +I FE + E+ L N+L +V K F GL+SLK L++R N +
Sbjct: 73 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNRIS 132
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F LS + L L N+I+ I F+ L +L L L
Sbjct: 133 CVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNL 174
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 41/144 (28%), Positives = 76/144 (52%)
Query: 149 KTVDSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLK 207
K D Q+ + L+ L++N+ + G F+ +L ++ ++NK++ + F G
Sbjct: 39 KIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAS 95
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
+ + L N LE++ ++F L L+ LD+ NRIS + F GL+++R+L L DNQ+
Sbjct: 96 GVNEILLTSNRLENVQYKMFKGLESLKTLDVRSNRISCVGNDSFIGLSSVRLLSLYDNQI 155
Query: 268 RSVPTPSFIYLGMLAELRVGLNVF 291
++ +F L L+ L + N F
Sbjct: 156 TTIAPGAFDTLHSLSTLNLLANPF 179
Score = 128 (50.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 36/121 (29%), Positives = 64/121 (52%)
Query: 169 NQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFA 228
N+ + + +G P++ + EL L+ N+ + V K K L +++L N + L ++ F+
Sbjct: 255 NKALKVLPKGI-PRD-VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLSNQSFS 311
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 288
++ L L L NR+ + F+GL +LR+L L N + VP +F L L+ L +G
Sbjct: 312 NMTQLLTLILSYNRLRCLPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGA 371
Query: 289 N 289
N
Sbjct: 372 N 372
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 38/102 (37%), Positives = 51/102 (50%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L L GN +P L + HL +DL NRIS + F +T L L L N+LR +P
Sbjct: 272 LYLDGNQFTLVPKEL-SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCLP 330
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+F L L L + N + + +GAFN L LS L + GA
Sbjct: 331 PRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI-GA 371
>RGD|1309449 [details] [associations]
symbol:Rxfp2 "relaxin/insulin-like family peptide receptor 2"
species:10116 "Rattus norvegicus" [GO:0001556 "oocyte maturation"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IEA;ISO] [GO:0007193
"adenylate cyclase-inhibiting G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA;ISO]
[GO:0017046 "peptide hormone binding" evidence=IPI] [GO:0030819
"positive regulation of cAMP biosynthetic process" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IDA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
RGD:1309449 GO:GO:0016021 GO:GO:0005886 GO:GO:0043066 GO:GO:0008285
GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007193 GO:GO:0030819 GO:GO:0008584 GO:GO:0017046
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 GO:GO:0001556
GO:GO:0016500 HOVERGEN:HBG026354 GeneTree:ENSGT00650000093266
HOGENOM:HOG000049056 CTD:122042 KO:K04307 OrthoDB:EOG47M1XF
OMA:KILCCAD EMBL:AY906861 IPI:IPI00554091 RefSeq:NP_001012493.1
UniGene:Rn.217421 SMR:Q5ECL0 STRING:Q5ECL0
Ensembl:ENSRNOT00000001197 GeneID:363866 KEGG:rno:363866
UCSC:RGD:1309449 InParanoid:Q5ECL0 NextBio:684380
Genevestigator:Q5ECL0 Uniprot:Q5ECL0
Length = 737
Score = 197 (74.4 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 56/174 (32%), Positives = 91/174 (52%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++++ L++N I + A +LQ + LSHN + ++ F+ +L L L+ N ++
Sbjct: 146 LRKIFLQHNCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPIT 205
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ ++F GL SL L++ N LE LP+RL A + L +DL N I I + F +
Sbjct: 206 RISQRSFTGLNSLFFLSMVSNRLEALPERLCAQMPQLNWVDLANNGIKFITNSTFLTCDS 265
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +L+L NQ+ VP +F L L EL + NV L F+ L L L+L
Sbjct: 266 LTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNVIAKLPAHLFSDLHLLQKLNL 319
Score = 164 (62.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 54/215 (25%), Positives = 94/215 (43%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDL 166
P C C + L C A+L +P ++ ++ L LK N+I + + Y+ L+ + L
Sbjct: 95 PQHCYCRENEL--ECVNADLKAVP-KVSSNVTLLSLKKNKIHRLPVKVFSKYAELRKIFL 151
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
HN + +I R F L L L+HN ++S+ F L L L L N + + R
Sbjct: 152 QHNCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQRS 211
Query: 227 FAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
F L+ L L + NR+ + + + L + L +N ++ + +F+ L L +
Sbjct: 212 FTGLNSLFFLSMVSNRLEALPERLCAQMPQLNWVDLANNGIKFITNSTFLTCDSLTVLFL 271
Query: 287 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
N + + F+ L L LDL + + H
Sbjct: 272 PRNQIGFVPEKTFSSLKNLGELDLSSNVIAKLPAH 306
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 44/171 (25%), Positives = 87/171 (50%)
Query: 110 DC-DCNDETLVVTCKEANLDVIPIT----LNPSIQRLVLKYNRIKTVDSAIQFY----SS 160
+C D + T + N++ + +T L+ Q + N ++ V++ ++ S+
Sbjct: 62 NCGDTSGWTTIFGTVHGNVNKVTLTEECFLSRYPQHCYCRENELECVNADLKAVPKVSSN 121
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
+ + L N++ +P++ F +L ++ L HN ++ ++ + F+GL +L++L L N +
Sbjct: 122 VTLLSLKKNKIHRLPVKVFSKYAELRKIFLQHNCITHISRRAFLGLHNLQILYLSHNCIT 181
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L +F L L L L N I+RI Q F GL +L L + N+L ++P
Sbjct: 182 SLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLSMVSNRLEALP 232
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/172 (28%), Positives = 78/172 (45%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L+L N I + + +SL + + N+L +P R +L + L +N + +
Sbjct: 197 LILDDNPITRISQRSFTGLNSLFFLSMVSNRLEALPERLCAQMPQLNWVDLANNGIKFIT 256
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
N TF+ SL VL L N + +P++ F+ L +L ELDL N I+++ F L L+
Sbjct: 257 NSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNVIAKLPAHLFSDLHLLQK 316
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L L N L V F L L L + + G F + LS + L+
Sbjct: 317 LNLSSNPLLYVHKNQFGSLKQLQSLDLERIEIPNINTGMFRPMKNLSHIYLK 368
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 43/143 (30%), Positives = 69/143 (48%)
Query: 193 NKLSSVNN--KTFIGLKS-LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQA 249
N+L VN K + S + +L+L+ N + LP ++F+ + L ++ L N I+ I +
Sbjct: 103 NELECVNADLKAVPKVSSNVTLLSLKKNKIHRLPVKVFSKYAELRKIFLQHNCITHISRR 162
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 309
F GL L+ILYL N + S+ F L LA L + N T ++ +F GL L L
Sbjct: 163 AFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLS 222
Query: 310 LRGAGLTNMMGHSMALGDYLHWI 332
+ L + A L+W+
Sbjct: 223 MVSNRLEALPERLCAQMPQLNWV 245
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 44/183 (24%), Positives = 78/183 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L +N I ++ I + L + L N + I R F L L + N+L
Sbjct: 169 NLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLSMVSNRL 228
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + + L ++L N ++ + + F L L L +N+I + + F L
Sbjct: 229 EALPERLCAQMPQLNWVDLANNGIKFITNSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLK 288
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N + +P F L +L +L + N + F L +L +LDL +
Sbjct: 289 NLGELDLSSNVIAKLPAHLFSDLHLLQKLNLSSNPLLYVHKNQFGSLKQLQSLDLERIEI 348
Query: 316 TNM 318
N+
Sbjct: 349 PNI 351
>UNIPROTKB|F1M602 [details] [associations]
symbol:Rxfp2 "Protein Rxfp2" species:10116 "Rattus
norvegicus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262
PROSITE:PS51450 SMART:SM00192 RGD:1309449 GO:GO:0016021
GO:GO:0004930 InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR000372 SMART:SM00013 IPI:IPI00947717
ProteinModelPortal:F1M602 Ensembl:ENSRNOT00000066252 Uniprot:F1M602
Length = 737
Score = 197 (74.4 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 56/174 (32%), Positives = 91/174 (52%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++++ L++N I + A +LQ + LSHN + ++ F+ +L L L+ N ++
Sbjct: 146 LRKIFLQHNCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPIT 205
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ ++F GL SL L++ N LE LP+RL A + L +DL N I I + F +
Sbjct: 206 RISQRSFTGLNSLFFLSMVSNRLEALPERLCAQMPQLNWVDLANNGIKFITNSTFLTCDS 265
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +L+L NQ+ VP +F L L EL + NV L F+ L L L+L
Sbjct: 266 LTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNVIAKLPAHLFSDLHLLQKLNL 319
Score = 164 (62.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 54/215 (25%), Positives = 94/215 (43%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDL 166
P C C + L C A+L +P ++ ++ L LK N+I + + Y+ L+ + L
Sbjct: 95 PQHCYCRENEL--ECVNADLKAVP-KVSSNVTLLSLKKNKIHRLPVKVFSKYAELRKIFL 151
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
HN + +I R F L L L+HN ++S+ F L L L L N + + R
Sbjct: 152 QHNCITHISRRAFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQRS 211
Query: 227 FAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
F L+ L L + NR+ + + + L + L +N ++ + +F+ L L +
Sbjct: 212 FTGLNSLFFLSMVSNRLEALPERLCAQMPQLNWVDLANNGIKFITNSTFLTCDSLTVLFL 271
Query: 287 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
N + + F+ L L LDL + + H
Sbjct: 272 PRNQIGFVPEKTFSSLKNLGELDLSSNVIAKLPAH 306
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 44/171 (25%), Positives = 87/171 (50%)
Query: 110 DC-DCNDETLVVTCKEANLDVIPIT----LNPSIQRLVLKYNRIKTVDSAIQFY----SS 160
+C D + T + N++ + +T L+ Q + N ++ V++ ++ S+
Sbjct: 62 NCGDTSGWTTIFGTVHGNVNKVTLTEECFLSRYPQHCYCRENELECVNADLKAVPKVSSN 121
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
+ + L N++ +P++ F +L ++ L HN ++ ++ + F+GL +L++L L N +
Sbjct: 122 VTLLSLKKNKIHRLPVKVFSKYAELRKIFLQHNCITHISRRAFLGLHNLQILYLSHNCIT 181
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L +F L L L L N I+RI Q F GL +L L + N+L ++P
Sbjct: 182 SLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLSMVSNRLEALP 232
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/172 (28%), Positives = 78/172 (45%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L+L N I + + +SL + + N+L +P R +L + L +N + +
Sbjct: 197 LILDDNPITRISQRSFTGLNSLFFLSMVSNRLEALPERLCAQMPQLNWVDLANNGIKFIT 256
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
N TF+ SL VL L N + +P++ F+ L +L ELDL N I+++ F L L+
Sbjct: 257 NSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNVIAKLPAHLFSDLHLLQK 316
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L L N L V F L L L + + G F + LS + L+
Sbjct: 317 LNLSSNPLLYVHKNQFGSLKQLQSLDLERIEIPNINTGMFRPMKNLSHIYLK 368
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 43/143 (30%), Positives = 69/143 (48%)
Query: 193 NKLSSVNN--KTFIGLKS-LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQA 249
N+L VN K + S + +L+L+ N + LP ++F+ + L ++ L N I+ I +
Sbjct: 103 NELECVNADLKAVPKVSSNVTLLSLKKNKIHRLPVKVFSKYAELRKIFLQHNCITHISRR 162
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 309
F GL L+ILYL N + S+ F L LA L + N T ++ +F GL L L
Sbjct: 163 AFLGLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLS 222
Query: 310 LRGAGLTNMMGHSMALGDYLHWI 332
+ L + A L+W+
Sbjct: 223 MVSNRLEALPERLCAQMPQLNWV 245
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 44/183 (24%), Positives = 78/183 (42%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q L L +N I ++ I + L + L N + I R F L L + N+L
Sbjct: 169 NLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPITRISQRSFTGLNSLFFLSMVSNRL 228
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + + L ++L N ++ + + F L L L +N+I + + F L
Sbjct: 229 EALPERLCAQMPQLNWVDLANNGIKFITNSTFLTCDSLTVLFLPRNQIGFVPEKTFSSLK 288
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N + +P F L +L +L + N + F L +L +LDL +
Sbjct: 289 NLGELDLSSNVIAKLPAHLFSDLHLLQKLNLSSNPLLYVHKNQFGSLKQLQSLDLERIEI 348
Query: 316 TNM 318
N+
Sbjct: 349 PNI 351
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 199 (75.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 58/183 (31%), Positives = 93/183 (50%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S+++L L N+++ + Q SL + SHN+L NIP + L+ L L+HN+L
Sbjct: 534 SLRQLYLNNNQLEKL---FQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLG 590
Query: 197 -SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++N ++F GL ++ L L+ N + P A +S L+ L L N I+ ++++ F L
Sbjct: 591 DTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLP 650
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L NQ++ + +F L L L + N TL + F GL L LDL L
Sbjct: 651 VLFELNLYGNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSL 710
Query: 316 TNM 318
T +
Sbjct: 711 TKL 713
Score = 186 (70.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 43/152 (28%), Positives = 80/152 (52%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
+SL + +++ L ++PI F+P KL L L+ N+L ++ F L+ L+VL++ N
Sbjct: 174 NSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQ 233
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
++ L + A L+ L ++ N +S + + F + L++L+L NQ+ + SF +
Sbjct: 234 IKKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDANSFRGM 293
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L + NV T + G F + R+ +DL
Sbjct: 294 RFLRRLFLSDNVLTDIGRGTFGSIARIGTIDL 325
Score = 184 (69.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 49/186 (26%), Positives = 89/186 (47%)
Query: 143 LKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
+ +N ++ +++A + ++ +DLSHN+L N R F+ QL++N L+++
Sbjct: 372 VSHNALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQI 431
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
+ LKVLN N + ++P F L L +D+ N IS I F+ L +LR +
Sbjct: 432 PIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSID 491
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
L N +R + + +F L L E+ + N ++ G+ L L L L L +
Sbjct: 492 LSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNNNQLEKLFQL 551
Query: 322 SMALGD 327
++L +
Sbjct: 552 PISLNE 557
Score = 166 (63.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 48/188 (25%), Positives = 90/188 (47%)
Query: 138 IQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L + +N+IK +++ I + L ++SHN L + F L L L+HN+++
Sbjct: 224 LEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIA 283
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ +F G++ L+ L L N L D+ F ++ + +DL +NR+ +I+ F +
Sbjct: 284 RLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQMNY 343
Query: 257 LRILYLDDNQLRSVPTPSF--IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
+ +L L +N + + SF IY ++ V N + AF ++ LDL
Sbjct: 344 VELLDLAENNITKIEKNSFKDIYQAII---NVSHNALELIETAAFENCVNITVLDLSHNR 400
Query: 315 LTNMMGHS 322
L N S
Sbjct: 401 LANFSRRS 408
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 52/181 (28%), Positives = 84/181 (46%)
Query: 138 IQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+QRL L+ N I + A+ S+LQ++ L +N + + F L EL L N++
Sbjct: 604 VQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVK 663
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ---ACFEG 253
++ + F GL L LNL N ++ L + +F L L LDL N ++++D +
Sbjct: 664 DISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDD 723
Query: 254 LTALRILYLDDNQLRSVPT---PSFIYLGM-LAELRVGLNVFTTLADGAFNGLGRLSALD 309
L +L L L N++ V PS Y+ L L + N+ L G +L LD
Sbjct: 724 LLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLD 783
Query: 310 L 310
+
Sbjct: 784 V 784
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 64/212 (30%), Positives = 97/212 (45%)
Query: 132 ITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+ + ++Q L L+ N I T++ SA L ++L NQ+ +I R FE +L+ L L
Sbjct: 622 VAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTLNL 681
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR---LFAPLSHLEELDLGQNRISRID 247
+ N + ++ N F+GL SL+ L+L N L L ++ + L LE LDL NRIS +
Sbjct: 682 SSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVT 741
Query: 248 QACFEGLTA----LRILYLDDNQLRSVPTPSFIY-LGMLAELRVGLNVFTTLADGAFNGL 302
+ F LR L L N L + T + L L V N L G +
Sbjct: 742 KKTFPSHQYIPYNLRNLNLSYN-LMPILTYDITFGTKKLVRLDVSHNQINDLRRGVISNF 800
Query: 303 GRLSALDLRGAGLTNMMG--HSMALGDYLHWI 332
L +LD+ L+N+ H L L W+
Sbjct: 801 TSLQSLDMSYNELSNLKSEEHIFDLPQNLSWL 832
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 45/162 (27%), Positives = 76/162 (46%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ +DL NQL N+ F+ +L L ++HN++ + + L L N+ N L
Sbjct: 200 LKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALS 259
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
+L FA S L+ L L N+I+R+D F G+ LR L+L DN L + +F +
Sbjct: 260 ELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIAR 319
Query: 281 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ + + N + F + + LDL +T + +S
Sbjct: 320 IGTIDLARNRLKKIEFQMFTQMNYVELLDLAENNITKIEKNS 361
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/141 (29%), Positives = 65/141 (46%)
Query: 178 GFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELD 237
G E L +++ + LS + +TF L+ LK L+L GN LE+L F L LE LD
Sbjct: 169 GQEIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLD 228
Query: 238 LGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 297
+ N+I +++ LT L + N L + +F +L L + N L
Sbjct: 229 ISHNQIKKLEAQHIADLTKLGWCNVSHNALSELSRGTFARNSVLKVLHLSHNQIARLDAN 288
Query: 298 AFNGLGRLSALDLRGAGLTNM 318
+F G+ L L L LT++
Sbjct: 289 SFRGMRFLRRLFLSDNVLTDI 309
Score = 129 (50.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 46/189 (24%), Positives = 82/189 (43%)
Query: 138 IQRLVLKYNRIKTVD--SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L N I ++ S Y ++ +++SHN L I FE + L L+HN+L
Sbjct: 344 VELLDLAENNITKIEKNSFKDIYQAI--INVSHNALELIETAAFENCVNITVLDLSHNRL 401
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + ++F L N L +L ++ L+ L+ N I+ I + CF L
Sbjct: 402 ANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLY 461
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L + + N + S+ F L L + + N + F L L +DL L
Sbjct: 462 ELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNEL 521
Query: 316 TNMMGHSMA 324
+++ S+A
Sbjct: 522 VSVVRGSLA 530
Score = 123 (48.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 32/105 (30%), Positives = 58/105 (55%)
Query: 140 RLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRG--FEPQEKLVELQLNHNKLS 196
RL + +N+I + I ++SLQ +D+S+N+L N+ F+ + L L L+HNK+
Sbjct: 781 RLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIFDLPQNLSWLDLSHNKIY 840
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
+ + +KSLK ++L N LED+P + + + ++ L N
Sbjct: 841 HLPFANLVKVKSLKYVDLTNNSLEDVPASIVGSMRNGSQVLLAGN 885
Score = 40 (19.1 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 15/80 (18%), Positives = 37/80 (46%)
Query: 11 KVQGQLDEIFWIDILD-----VTYILYKLHPGFQNNPKSNFKSPTEILKSLLIIPFEVRI 65
K G LD++ ++ LD ++++ K P Q P N ++ + I+ +++
Sbjct: 716 KTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPY-NLRNLNLSYNLMPILTYDITF 774
Query: 66 LNKLRIFINDSVLFSSVSDI 85
K + ++ V + ++D+
Sbjct: 775 GTKKLVRLD--VSHNQINDL 792
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 200 (75.5 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 45/135 (33%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L +P + + L L N+ V + Y L +DL
Sbjct: 623 CPAECTCLDT--VVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 680
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 681 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGA 740
Query: 227 FAPLSHLEELDLGQN 241
F LS L L +G N
Sbjct: 741 FNDLSALSHLAIGAN 755
Score = 185 (70.2 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 55/178 (30%), Positives = 83/178 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C++ +V C+ L IP L +I + L+ N IK + A Y L+ +D
Sbjct: 166 CPAACTCSNN--IVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 223
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQ+ F+ L L L NK++ + F GL SL++L L N + L
Sbjct: 224 LSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVD 283
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L +L L L N++ I + F L A++ LY + L P +L LA+
Sbjct: 284 AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLY--ERHLAQNPFICDCHLKWLAD 339
Score = 178 (67.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 58/167 (34%), Positives = 84/167 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP PQ EL+LN+N+ S + F L L+ +NL N + D+
Sbjct: 413 VDCSNQKLNKIP--DHIPQYT-AELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDI 469
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F S + EL L NR+ + F+GL +L+ L L N++ V SF L +
Sbjct: 470 EEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVR 529
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+A G+F+ L LS L+L A N H LGD+L
Sbjct: 530 LLSLYDNQITTVAPGSFDTLHSLSTLNLL-ANPFNCNCHLAWLGDWL 575
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 50/162 (30%), Positives = 77/162 (47%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--S 160
A CP C C T V C L+ IP + L L N +++ F
Sbjct: 398 ADLACPEKCRCEGTT--VDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQ 455
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS+N++ +I F+ + EL L N+L +V +K F GL+SLK L LR N +
Sbjct: 456 LRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVS 515
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F LS + L L N+I+ + F+ L +L L L
Sbjct: 516 CVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNL 557
Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/149 (31%), Positives = 79/149 (53%)
Query: 144 KYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKT 202
K N+I D Q+ + L+ L++N+ + G F+ +L ++ L++NK++ +
Sbjct: 419 KLNKIP--DHIPQYTAELR---LNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGA 473
Query: 203 FIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F G + L L N LE + D++F L L+ L L NR+S + F GL+++R+L L
Sbjct: 474 FDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSL 533
Query: 263 DDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
DNQ+ +V SF L L+ L + N F
Sbjct: 534 YDNQITTVAPGSFDTLHSLSTLNLLANPF 562
Score = 139 (54.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 48/169 (28%), Positives = 75/169 (44%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E + E++L N + + F K L+ ++L N + +
Sbjct: 177 VDCRGKGLTEIPTN--LP-ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAA 233
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + + FEGL +L++L L+ N++ + +F L L
Sbjct: 234 PDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 293
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMG--HSMALGDYLH 330
L + N T+A G F+ L + L R + H L DYLH
Sbjct: 294 LSLYDNKLQTIAKGTFSPLRAIQTLYERHLAQNPFICDCHLKWLADYLH 342
Score = 130 (50.8 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 39/107 (36%), Positives = 53/107 (49%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN +P L + HL +DL NRIS + F +T L L L N+
Sbjct: 650 KDVTELYLDGNQFTLVPKEL-SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 708
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
LR +P +F L L L + N + + +GAFN L LS L + GA
Sbjct: 709 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI-GA 754
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L+ N+ + V K K L +++L N + L
Sbjct: 634 VRCSNKGLKALP-KGI-PKD-VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLS 689
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
++ F+ ++ L L L NR+ I F+GL +LR+L L N + VP +F L L+
Sbjct: 690 NQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSH 749
Query: 284 LRVGLN 289
L +G N
Sbjct: 750 LAIGAN 755
Score = 64 (27.6 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 143 LKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L N+I+ + A + ++++ L +NQ+ I F L L LN+N ++ ++
Sbjct: 26 LSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVA 85
Query: 202 TFIGLKSLKVLNLRGNFL 219
+F + L+ L N L
Sbjct: 86 SFNHMPKLRTFRLHSNNL 103
Score = 57 (25.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L+L+ NR+ V + + SS++ + L NQ+ + F+ L L L N
Sbjct: 503 SLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPF 562
Query: 196 SSVNNKTFIG--LKSLKVL--NLRGN---FLEDLP 223
+ + ++G L+ +++ N R FL+++P
Sbjct: 563 NCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIP 597
>UNIPROTKB|Q92626 [details] [associations]
symbol:PXDN "Peroxidasin homolog" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005152
"interleukin-1 receptor antagonist activity" evidence=NAS]
[GO:0006955 "immune response" evidence=NAS] [GO:0004601 "peroxidase
activity" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0001960
"negative regulation of cytokine-mediated signaling pathway"
evidence=NAS] InterPro:IPR001611 InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214 GO:GO:0005783
GO:GO:0005615 EMBL:CH471053 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006955 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Orphanet:289499 GO:GO:0005201 Gene3D:1.10.640.10 GO:GO:0005152
CleanEx:HS_PRG2 HSSP:P05164 eggNOG:NOG262194 HOGENOM:HOG000016084
HOVERGEN:HBG108312 EMBL:AF200348 EMBL:EF090903 EMBL:D86983
EMBL:BC098579 IPI:IPI00016112 IPI:IPI00791587 RefSeq:NP_036425.1
UniGene:Hs.332197 ProteinModelPortal:Q92626 SMR:Q92626
IntAct:Q92626 STRING:Q92626 PeroxiBase:3355 PhosphoSite:Q92626
DMDM:172045828 PaxDb:Q92626 PRIDE:Q92626 DNASU:7837
Ensembl:ENST00000252804 GeneID:7837 KEGG:hsa:7837 UCSC:uc002qxa.3
UCSC:uc002qxb.1 CTD:7837 GeneCards:GC02M001635 HGNC:HGNC:14966
HPA:HPA012375 MIM:605158 neXtProt:NX_Q92626 PharmGKB:PA128394535
InParanoid:Q92626 OMA:EPVITWN OrthoDB:EOG4J1179 ChiTaRS:PXDN
GenomeRNAi:7837 NextBio:30238 ArrayExpress:Q92626 Bgee:Q92626
CleanEx:HS_PXDN Genevestigator:Q92626 Uniprot:Q92626
Length = 1479
Score = 200 (75.5 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 57/164 (34%), Positives = 82/164 (50%)
Query: 105 AFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQH 163
A CP C C T V C L+ +P + P L L++NRI+ + A + +L
Sbjct: 34 AGCPSRCLCFRTT--VRCMHLLLEAVP-AVAPQTSILDLRFNRIREIQPGAFRRLRNLNT 90
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L++NQ+ IP FE E L L L N++ S++ + F GL SL+ L L N +E L
Sbjct: 91 LLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLD 150
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
F L LE L L NRI+ + F L +++ L LD N L
Sbjct: 151 PDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKRLRLDSNTL 194
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/130 (33%), Positives = 67/130 (51%)
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
PQ +++L+ N ++ + F L++L L L N ++ +P F L +L+ L L +
Sbjct: 62 PQTSILDLRFN--RIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYK 119
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
N I ID+ F+GL +L LYL NQ+ ++ SF +L L L + N T L G FN
Sbjct: 120 NEIQSIDRQAFKGLASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFN 179
Query: 301 GLGRLSALDL 310
L + L L
Sbjct: 180 HLESMKRLRL 189
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/126 (29%), Positives = 65/126 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ I F L L LN+N++ + + F L++LK L L N ++ +
Sbjct: 67 LDLRFNRIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSID 126
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L+ LE+L L N+I +D F+ L L L+L +N++ + +F +L +
Sbjct: 127 RQAFKGLASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKR 186
Query: 284 LRVGLN 289
LR+ N
Sbjct: 187 LRLDSN 192
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 211 VLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSV 270
+L+LR N + ++ F L +L L L N+I RI FE L L+ LYL N+++S+
Sbjct: 66 ILDLRFNRIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSI 125
Query: 271 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
+F L L +L + N TL +F L +L L L +T+++
Sbjct: 126 DRQAFKGLASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLV 174
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 200 (75.5 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 45/135 (33%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L +P + + L L N+ V + Y L +DL
Sbjct: 723 CPAECTCLDT--VVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDL 780
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 781 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGA 840
Query: 227 FAPLSHLEELDLGQN 241
F LS L L +G N
Sbjct: 841 FNDLSALSHLAIGAN 855
Score = 187 (70.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 51/160 (31%), Positives = 77/160 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C++ +V C+ L IP L +I + L+ N IK + A Y L+ +D
Sbjct: 269 CPAACTCSNN--IVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 326
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQ+ F+ L L L NK++ + F GL SL++L L N + L
Sbjct: 327 LSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVD 386
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L A++ L+L N
Sbjct: 387 AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLAQN 426
Score = 187 (70.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 51/186 (27%), Positives = 87/186 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV-- 164
CP C C+ T V C L +P + + +RL L N I + ++ L+H+
Sbjct: 24 CPAQCSCSGST--VDCHGLALRGVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRV 79
Query: 165 -DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L N++ I F+ ++L L+LN N L ++ F+G L L+L N ++ +P
Sbjct: 80 LQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQAIP 139
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F ++ L L N+IS I+ F L L +L L++N + + SF ++ L
Sbjct: 140 RKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 199
Query: 284 LRVGLN 289
R+ N
Sbjct: 200 FRLHSN 205
Score = 178 (67.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/167 (34%), Positives = 84/167 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP PQ EL+LN+N+ S + F L L+ +NL N + D+
Sbjct: 513 VDCSNQKLNKIP--DHIPQYT-AELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDI 569
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F S + EL L NR+ + F+GL +L+ L L N++ V SF L +
Sbjct: 570 EEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVR 629
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+A G+F+ L LS L+L A N H LGD+L
Sbjct: 630 LLSLYDNQITTVAPGSFDTLHSLSTLNLL-ANPFNCNCHLAWLGDWL 675
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 49/154 (31%), Positives = 72/154 (46%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL+ N + I F L LQL NK+S++ F LK L+ L L N L+
Sbjct: 54 ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQL 113
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L + LF L LDL +N+I I + F G ++ L LD NQ+ + +F L L
Sbjct: 114 LSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDL 173
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L + N T L+ +FN + +L L L
Sbjct: 174 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 207
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 50/162 (30%), Positives = 77/162 (47%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--S 160
A CP C C T V C L+ IP + L L N +++ F
Sbjct: 498 ADLACPEKCRCEGTT--VDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKKLPQ 555
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++LS+N++ +I F+ + EL L N+L +V +K F GL+SLK L LR N +
Sbjct: 556 LRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVS 615
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F LS + L L N+I+ + F+ L +L L L
Sbjct: 616 CVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNL 657
Score = 165 (63.1 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 43/132 (32%), Positives = 69/132 (52%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + IP F P +KL + L++N++S F GL+SL L L GN +
Sbjct: 297 TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKI 356
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+LP LF L L+ L L N+I+ + F+ L L +L L DN+L+++ +F L
Sbjct: 357 TELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 416
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 417 AIQTLHLAQNPF 428
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L LN N ++ + F GL+ L+VL L N + + F L LE L L +N + +
Sbjct: 56 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLS 115
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F G L L L +NQ++++P +F + L++ N + + DGAF L L
Sbjct: 116 ELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEV 175
Query: 308 LDLRGAGLTNM 318
L L +T +
Sbjct: 176 LTLNNNNITRL 186
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 47/149 (31%), Positives = 79/149 (53%)
Query: 144 KYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKT 202
K N+I D Q+ + L+ L++N+ + G F+ +L ++ L++NK++ +
Sbjct: 519 KLNKIP--DHIPQYTAELR---LNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGA 573
Query: 203 FIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F G + L L N LE + D++F L L+ L L NR+S + F GL+++R+L L
Sbjct: 574 FDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSL 633
Query: 263 DDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
DNQ+ +V SF L L+ L + N F
Sbjct: 634 YDNQITTVAPGSFDTLHSLSTLNLLANPF 662
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 41/128 (32%), Positives = 59/128 (46%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I T++ A Q L+ + L+ N L + F KL L L+ N++ ++
Sbjct: 80 LQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQAIP 139
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G +K L L N + + D F L LE L L N I+R+ A F + LR
Sbjct: 140 RKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 199
Query: 260 LYLDDNQL 267
L N L
Sbjct: 200 FRLHSNNL 207
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E + E++L N + + F K L+ ++L N + +
Sbjct: 280 VDCRGKGLTEIPTN--LP-ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAA 336
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + + FEGL +L++L L+ N++ + +F L L
Sbjct: 337 PDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 396
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL-RGAGLTNMMGHSMALGDYLH 330
L + N T+A G F+ L + L L + + + H L DYLH
Sbjct: 397 LSLYDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDC--HLKWLADYLH 442
Score = 130 (50.8 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 39/107 (36%), Positives = 53/107 (49%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN +P L + HL +DL NRIS + F +T L L L N+
Sbjct: 750 KDVTELYLDGNQFTLVPKEL-SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 808
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
LR +P +F L L L + N + + +GAFN L LS L + GA
Sbjct: 809 LRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI-GA 854
Score = 130 (50.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L+ N+ + V K K L +++L N + L
Sbjct: 734 VRCSNKGLKALP-KGI-PKD-VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLS 789
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
++ F+ ++ L L L NR+ I F+GL +LR+L L N + VP +F L L+
Sbjct: 790 NQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSH 849
Query: 284 LRVGLN 289
L +G N
Sbjct: 850 LAIGAN 855
Score = 57 (25.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L+L+ NR+ V + + SS++ + L NQ+ + F+ L L L N
Sbjct: 603 SLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPF 662
Query: 196 SSVNNKTFIG--LKSLKVL--NLRGN---FLEDLP 223
+ + ++G L+ +++ N R FL+++P
Sbjct: 663 NCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIP 697
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 197 (74.4 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 51/142 (35%), Positives = 68/142 (47%)
Query: 169 NQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFA 228
N + +P L EL+L N L+ + F GL SLKVL L+ N L +P
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQ 61
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 288
L L+ L L N I+ + CF GL +LR L+LDDN L +P +F L L + + L
Sbjct: 62 NLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLAL 121
Query: 289 NVFTTLADGAFNGLGRLSALDL 310
N + D AF L L L L
Sbjct: 122 NKIHYIPDYAFGNLSSLVVLHL 143
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 57/178 (32%), Positives = 78/178 (43%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+Q L L N I V + SL+H+ L N L IPI+ F L + L NK+
Sbjct: 65 SLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKI 124
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + F L SL VL+L N + L + F L LE LDL N + A LT
Sbjct: 125 HYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPTA-IRTLT 183
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L N ++S+P +F+ L + N + AF L L L L GA
Sbjct: 184 NLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTLNGA 241
Score = 176 (67.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 54/166 (32%), Positives = 84/166 (50%)
Query: 137 SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L+L+ N+++ V + A+Q SLQ + L N + +P F L L L+ N L
Sbjct: 41 SLKVLMLQNNQLRQVPTEALQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSL 100
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + + F L +L+ + L N + +PD F LS L L L NRI + + CF+GL
Sbjct: 101 TEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLH 160
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
+L L L+ N L PT + L L EL N ++ + AF G
Sbjct: 161 SLETLDLNYNSLDEFPT-AIRTLTNLKELGFHSNNIKSIPERAFVG 205
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/150 (31%), Positives = 68/150 (45%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ + L+ N L IP F L L L +N+L V + L+SL+ L L N +
Sbjct: 18 LEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQNLRSLQSLRLDANHIN 77
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
+P F L L L L N ++ I F L AL+ + L N++ +P +F L
Sbjct: 78 YVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSS 137
Query: 281 LAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L + N +L F+GL L LDL
Sbjct: 138 LVVLHLHNNRIYSLGKKCFDGLHSLETLDL 167
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/175 (25%), Positives = 78/175 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S++ L L YN + +AI+ ++L+ + N + +IP R F L+ + N +
Sbjct: 161 SLETLDLNYNSLDEFPTAIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQ 220
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L+ L L G + + + PD + LE L L +I+ + ++ + L
Sbjct: 221 LVGKSAFQNLPELRTLTLNGASQITEFPD--LTGTTSLESLTLTGAQITSLPRSACDQLP 278
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L++L L N L +P F L ++ + N + F L L +LDL
Sbjct: 279 NLQVLDLSYNLLEDLPC--FTACKKLQKIDLHHNEIDEIKADTFRQLASLRSLDL 331
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 40/129 (31%), Positives = 69/129 (53%)
Query: 132 ITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+T S++ L L +I ++ SA +LQ +DLS+N L ++P F +KL ++ L
Sbjct: 250 LTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDLPC--FTACKKLQKIDL 307
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQAC 250
+HN++ + TF L SL+ L+L N ++ + F+ L L +LD+ N +S
Sbjct: 308 HHNEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLSSFPVTG 367
Query: 251 FEGLTALRI 259
GLT L++
Sbjct: 368 LHGLTHLKL 376
Score = 137 (53.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 38/102 (37%), Positives = 50/102 (49%)
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 276
N + LP L LEEL L N ++ I + F GL +L++L L +NQLR VPT +
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQ 61
Query: 277 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L LR+ N + FNGL L L L LT +
Sbjct: 62 NLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEI 103
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 51/173 (29%), Positives = 80/173 (46%)
Query: 135 NPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNH 192
NPS+ + N I+ V SA Q L+ + L+ +Q+ P L L L
Sbjct: 206 NPSLITIHFYDNPIQLVGKSAFQNLPELRTLTLNGASQITEFP--DLTGTTSLESLTLTG 263
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
+++S+ L +L+VL+L N LEDLP F L+++DL N I I F
Sbjct: 264 AQITSLPRSACDQLPNLQVLDLSYNLLEDLP--CFTACKKLQKIDLHHNEIDEIKADTFR 321
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
L +LR L L N+++ + +F L L +L V N+ ++ +GL L
Sbjct: 322 QLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLSSFPVTGLHGLTHL 374
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 194 (73.4 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 53/173 (30%), Positives = 88/173 (50%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I +V+ +A Q ++ + LS N++ +P F P L + L++N L S+
Sbjct: 94 LYLDHNHICSVEGNAFQKLRRVKELTLSSNKITQLPNNTFRPMPNLRSVDLSYNNLQSLE 153
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F GL+ L L++R N ++ +P R+F L+ LD+G N++ + + F GL L
Sbjct: 154 PDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTE 213
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L+L+ N L V F L L L + N T + + + + +L LDL G
Sbjct: 214 LHLEHNDLVKVNLAHFPRLISLHSLCLRRNKVTIVVN-TLDWIWQLEKLDLSG 265
Score = 187 (70.9 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 49/164 (29%), Positives = 77/164 (46%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S + + L +N L + F +L L L+HN + SV F L+ +K L L N
Sbjct: 65 SGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNK 124
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
+ LP+ F P+ +L +DL N + ++ F GL L L++ N ++ VP F
Sbjct: 125 ITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDC 184
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM-MGH 321
L L +G N +LA +F GL +L+ L L L + + H
Sbjct: 185 RSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAH 228
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 49/128 (38%), Positives = 66/128 (51%)
Query: 141 LVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L ++ N IK V I Q SL+ +D+ +NQL ++ F KL EL L HN L VN
Sbjct: 166 LHMRSNAIKFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVN 225
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F L SL L LR N + + + L + LE+LDL N I I+ FE + L+
Sbjct: 226 LAHFPRLISLHSLCLRRNKVTIVVNTLDW-IWQLEKLDLSGNEIEYIEPHVFESVPHLKS 284
Query: 260 LYLDDNQL 267
L LD N+L
Sbjct: 285 LQLDSNRL 292
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L + YN++K++ ++ L + L HN LV + + F L L L NK+
Sbjct: 186 SLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCLRRNKV 245
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ V N T + L+ L+L GN +E + +F + HL+ L L NR++ ID +
Sbjct: 246 TIVVN-TLDWIWQLEKLDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRILDSWK 304
Query: 256 ALRILYLDDN 265
+L + L N
Sbjct: 305 SLTSISLSAN 314
Score = 115 (45.5 bits), Expect = 0.00087, P = 0.00087
Identities = 38/140 (27%), Positives = 62/140 (44%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
++ L L +N LS +++ F GL L L L N + + F L ++EL L N+I+
Sbjct: 67 MMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTLSSNKIT 126
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
++ F + LR + L N L+S+ F L L L + N + F
Sbjct: 127 QLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRIFQDCRS 186
Query: 305 LSALDLRGAGLTNMMGHSMA 324
L LD+ L ++ +S A
Sbjct: 187 LKFLDIGYNQLKSLARNSFA 206
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 199 (75.1 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQ 162
S CP C C++ +V C+ L IP L I + L+ N IK++ + A Y L+
Sbjct: 74 SISCPSACTCSNN--IVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLK 131
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+D+S NQ+ +I F+ + L L L NK++ + F GL SL++L L N + L
Sbjct: 132 RIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNANKINCL 191
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L A++ L+L N
Sbjct: 192 RVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN 234
Score = 185 (70.2 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 52/161 (32%), Positives = 78/161 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--SLQHV 164
CP C C E +V C L IP L + L L N I +++ F +L+ +
Sbjct: 302 CPEKCRC--EGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKI 359
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ + F+ + EL L N+L +V+ + F GL SLK L LR N + + +
Sbjct: 360 NLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLITCVSN 419
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
FA LS + L L NRI+ I F L +L + L N
Sbjct: 420 DTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 460
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 44/135 (32%), Positives = 65/135 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP C C ET VV C L +P + + L L+ N + V + L +DL
Sbjct: 522 CPEQCTCL-ET-VVRCSNRGLHTLPKGIPKDVTELYLEGNHLTAVPRELSALRHLTLIDL 579
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N + + F L L L++N+L + F GL+SL+VL L GN + +P+
Sbjct: 580 SNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGS 639
Query: 227 FAPLSHLEELDLGQN 241
F+ L+ L L LG N
Sbjct: 640 FSDLTSLSHLALGTN 654
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/167 (29%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP P E + +L+LN N++S + F L +L+ +NL N ++++
Sbjct: 313 VDCSNQKLARIP--SHLP-EYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEV 369
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + ++EL L N++ + F GL++L+ L L N + V +F L +
Sbjct: 370 REGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVR 429
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+ GAF L LS ++L N H LG +L
Sbjct: 430 LLSLYDNRITTITPGAFTTLVSLSTINLLSNPF-NCNCHLAWLGKWL 475
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N + +IP F +KL + ++ N++S + F GLKSL L L GN + +L
Sbjct: 109 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELA 168
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L L+ L L N+I+ + F+ L L +L L DN+L+++ F L +
Sbjct: 169 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQT 228
Query: 284 LRVGLNVF 291
L + N F
Sbjct: 229 LHLAQNPF 236
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 44/126 (34%), Positives = 68/126 (53%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L N L++V + L+ L +++L N + L
Sbjct: 533 VRCSNRGLHTLP-KGI-PKD-VTELYLEGNHLTAVPRE-LSALRHLTLIDLSNNSIGVLT 588
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ +SHL L L NR+ I F+GL +LR+L L N + SVP SF L L+
Sbjct: 589 NYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSH 648
Query: 284 LRVGLN 289
L +G N
Sbjct: 649 LALGTN 654
Score = 138 (53.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E +VE++L N + S+ F K LK +++ N + D+
Sbjct: 88 VDCRGKGLTEIPAN--LP-EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 144
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + + F+GL +L++L L+ N++ + +F L L
Sbjct: 145 PDAFQGLKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNL 204
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N T++ G F L + L L
Sbjct: 205 LSLYDNKLQTISKGLFAPLQAIQTLHL 231
Score = 120 (47.3 bits), Expect = 0.00078, P = 0.00078
Identities = 36/104 (34%), Positives = 52/104 (50%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN L +P L A L HL +DL N I + F ++ L L L N+
Sbjct: 549 KDVTELYLEGNHLTAVPRELSA-LRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNR 607
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR +P +F L L L + N +++ +G+F+ L LS L L
Sbjct: 608 LRCIPIHAFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLAL 651
>FB|FBgn0015400 [details] [associations]
symbol:kek2 "kekkon-2" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:Q9BZR6
GeneTree:ENSGT00700000104028 FlyBase:FBgn0015400 EMBL:BT120011
RefSeq:NP_523551.1 UniGene:Dm.2402 SMR:Q9VKG1 MINT:MINT-1619269
STRING:Q9VKG1 EnsemblMetazoa:FBtr0080252 GeneID:34582
KEGG:dme:Dmel_CG4977 UCSC:CG4977-RA CTD:34582 InParanoid:Q9VKG1
OMA:DSPDEGY GenomeRNAi:34582 NextBio:789152 Uniprot:Q9VKG1
Length = 894
Score = 197 (74.4 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 57/171 (33%), Positives = 85/171 (49%)
Query: 104 SAFCPPD-CDCNDE--TLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS- 159
+A CPP+ C C + V C L +P ++P Q L N ++ + S +F
Sbjct: 17 TAACPPEVCVCKWKGGKQTVECGGQQLSNLPEGMDPGTQVLNFSGNALQVLQSE-RFLRM 75
Query: 160 ---SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRG 216
+LQ + LS NQL+ I + F LVEL L+ N L +V ++TF SL L+L G
Sbjct: 76 DLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETFQDYSSLMRLSLSG 135
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
N + +L F LS L L+L ++ RI+ F G+ L L LD N++
Sbjct: 136 NPIRELKTSAFRHLSFLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNRI 186
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFI--GLKSLKVLNLRGNFL 219
Q V+ QL N+P G +P ++ L + N L + ++ F+ L +L+ + L N L
Sbjct: 34 QTVECGGQQLSNLP-EGMDPGTQV--LNFSGNALQVLQSERFLRMDLLNLQKIYLSRNQL 90
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+ ++ F L++L ELDL +N + + F+ ++L L L N +R + T +F +L
Sbjct: 91 IRIHEKAFRGLTNLVELDLSENALQNVPSETFQDYSSLMRLSLSGNPIRELKTSAFRHLS 150
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYLHWI 332
L L + + + AF G+ L L L G + + G + L LH I
Sbjct: 151 FLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNRIGFIQGTHI-LPKSLHGI 202
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 137 SIQRLVLKYNR-IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++Q++ L N+ I+ + A + ++L +DLS N L N+P F+ L+ L L+ N +
Sbjct: 79 NLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETFQDYSSLMRLSLSGNPI 138
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI 246
+ F L L L L +E + + F + +LE L L NRI I
Sbjct: 139 RELKTSAFRHLSFLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNRIGFI 189
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 199 (75.1 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 52/163 (31%), Positives = 80/163 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQ 162
S CP C C++ +V C+ L IP L I + L+ N IK++ + A Y L+
Sbjct: 91 SISCPSACTCSNN--IVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLK 148
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+D+S NQ+ +I F+ + L L L NK++ + F GL SL++L L N + L
Sbjct: 149 RIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCL 208
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L L L L N++ I + F L A++ L+L N
Sbjct: 209 RVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN 251
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 50/161 (31%), Positives = 76/161 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--SLQHV 164
CP C C E +V C L IP L + L L N I +++ F +L+ +
Sbjct: 319 CPDRCRC--EGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLEATGIFKKLPNLRKI 376
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ + F+ + EL L N+L + + + F GL LK L LR N + + +
Sbjct: 377 NLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVSN 436
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
FA LS + L L NRI+ I F L +L + L N
Sbjct: 437 DTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 477
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 41/130 (31%), Positives = 63/130 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP C C ET VV C L +P + + L L+ N + V + + L +DL
Sbjct: 539 CPEQCTCV-ET-VVRCSNRGLRALPKGIPKDVTELYLEGNHLTAVPKELSSFRHLTLIDL 596
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N + + F L L L++N+L + +F GL+SL+VL L GN + +P+
Sbjct: 597 SNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGS 656
Query: 227 FAPLSHLEEL 236
F L+ L L
Sbjct: 657 FNDLTSLSHL 666
Score = 159 (61.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 41/128 (32%), Positives = 67/128 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N + +IP F +KL + ++ N++S + F GLKSL L L GN + ++P
Sbjct: 126 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 185
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L L+ L L N+I+ + F+ L +L +L L DN+L+++ F L +
Sbjct: 186 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQT 245
Query: 284 LRVGLNVF 291
L + N F
Sbjct: 246 LHLAQNPF 253
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 50/167 (29%), Positives = 81/167 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP P E + +L+LN N++S + F L +L+ +NL N ++++
Sbjct: 330 VDCSNQKLARIP--SHLP-EYVTDLRLNDNEISVLEATGIFKKLPNLRKINLSNNRIKEV 386
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + ++EL L N++ F GL+ L+ L L N + V +F L +
Sbjct: 387 KEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVR 446
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+ GAF L LS ++L N H LG +L
Sbjct: 447 LLSLYDNRITTITPGAFTTLVSLSTINLLSNPF-NCNCHLAWLGKWL 492
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/147 (29%), Positives = 71/147 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E +VE++L N + S+ F K LK +++ N + D+
Sbjct: 105 VDCRGKGLTEIPAN--LP-EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 161
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ I + F+GL +L++L L+ N++ + +F L L+
Sbjct: 162 PDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSL 221
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N T++ G F L + L L
Sbjct: 222 LSLYDNKLQTISKGLFAPLQAIQTLHL 248
Score = 131 (51.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 42/121 (34%), Positives = 63/121 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L N L++V K + L +++L N + L
Sbjct: 550 VRCSNRGLRALP-KGI-PKD-VTELYLEGNHLTAVP-KELSSFRHLTLIDLSNNSIGMLT 605
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ +SHL L L NR+ I F GL +LR+L L N + SVP SF L L+
Sbjct: 606 NYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSH 665
Query: 284 L 284
L
Sbjct: 666 L 666
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00028
Identities = 35/102 (34%), Positives = 50/102 (49%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN L +P L + HL +DL N I + F ++ L L L N+
Sbjct: 566 KDVTELYLEGNHLTAVPKEL-SSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNR 624
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
LR +P SF L L L + N +++ +G+FN L LS L
Sbjct: 625 LRCIPVHSFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHL 666
>MGI|MGI:1349645 [details] [associations]
symbol:Islr "immunoglobulin superfamily containing
leucine-rich repeat" species:10090 "Mus musculus" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:1349645
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 HSSP:P07359
eggNOG:NOG240332 OrthoDB:EOG4QC14W GeneTree:ENSGT00700000104028
CTD:3671 HOGENOM:HOG000113109 HOVERGEN:HBG100853 OMA:HGKAVEG
EMBL:AB024538 EMBL:AB024539 EMBL:BC006602 IPI:IPI00123635
RefSeq:NP_001182360.1 RefSeq:NP_036173.1 UniGene:Mm.367887
ProteinModelPortal:Q6GU68 SMR:Q6GU68 STRING:Q6GU68 PRIDE:Q6GU68
Ensembl:ENSMUST00000041477 Ensembl:ENSMUST00000168864 GeneID:26968
KEGG:mmu:26968 UCSC:uc009pwk.2 InParanoid:Q6GU68 NextBio:304907
Bgee:Q6GU68 Genevestigator:Q6GU68 Uniprot:Q6GU68
Length = 428
Score = 192 (72.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 49/162 (30%), Positives = 79/162 (48%)
Query: 107 CPPDCDCNDET--LVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQH 163
CP CDC ++ + C +L+ +P ++ L L NR+ + + A + LQ
Sbjct: 19 CPEPCDCGEKYGFQIADCAYRDLEGVPPGFPANVTTLSLSANRLPGLPEGAFREVPLLQS 78
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L+HN++ ++ I P L L L+HN LS L +L++L + N L +P
Sbjct: 79 LWLAHNEIRSVAIGALAPLSHLKSLDLSHNLLSEFAWSDLHNLSALQLLKMDSNELAFIP 138
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F+ LS L L L NR+ + + F LTAL L ++DN
Sbjct: 139 RDAFSSLSALRSLQLNHNRLHALAEGTFAPLTALSHLQINDN 180
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 48/149 (32%), Positives = 73/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
Q D ++ L +P GF P + L L+ N+L + F + L+ L L N +
Sbjct: 32 QIADCAYRDLEGVP-PGF-PAN-VTTLSLSANRLPGLPEGAFREVPLLQSLWLAHNEIRS 88
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+ APLSHL+ LDL N +S + L+AL++L +D N+L +P +F L L
Sbjct: 89 VAIGALAPLSHLKSLDLSHNLLSEFAWSDLHNLSALQLLKMDSNELAFIPRDAFSSLSAL 148
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L++ N LA+G F L LS L +
Sbjct: 149 RSLQLNHNRLHALAEGTFAPLTALSHLQI 177
>RGD|1302973 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor 1"
species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IEA;ISO]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IMP] [GO:0007567 "parturition"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030198
"extracellular matrix organization" evidence=IEA;ISO] [GO:0042562
"hormone binding" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060427 "lung connective tissue development"
evidence=IEA;ISO] [GO:0060658 "nipple morphogenesis"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 RGD:1302973 GO:GO:0016021 GO:GO:0005886 GO:GO:0030154
GO:GO:0046872 GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
HSSP:P01130 GO:GO:0060427 CTD:59350 HOVERGEN:HBG026354 KO:K04306
GO:GO:0060658 HOGENOM:HOG000049056 OrthoDB:EOG4NGGM1 EMBL:AY509976
IPI:IPI00409992 RefSeq:NP_958820.1 UniGene:Rn.109230
ProteinModelPortal:Q6R6I6 SMR:Q6R6I6 STRING:Q6R6I6
PhosphoSite:Q6R6I6 PRIDE:Q6R6I6 GeneID:295144 KEGG:rno:295144
UCSC:RGD:1302973 InParanoid:Q6R6I6 NextBio:639021
Genevestigator:Q6R6I6 Uniprot:Q6R6I6
Length = 758
Score = 196 (74.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 67/217 (30%), Positives = 104/217 (47%)
Query: 110 DCDCNDETL-VVTCKEANLDVIPI------TLNPS-------IQRLVLKYNRIKTVD-SA 154
+ DC++ L V +N+ V+ + TL P+ +Q+L L+ N+I++V SA
Sbjct: 110 ELDCDEANLRAVPSVSSNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSA 169
Query: 155 IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNL 214
+ SL + LSHN++ + FE +L L + N LS ++ TF GL SL +L L
Sbjct: 170 FRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVL 229
Query: 215 RGNFLEDLPDR-LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP 273
N L LPD+ L + L LD NRI + F L +L + N++ +
Sbjct: 230 MNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEH 289
Query: 274 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+F +L L EL +G N L F L LS L++
Sbjct: 290 AFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNI 326
Score = 190 (71.9 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 57/213 (26%), Positives = 106/213 (49%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDL 166
P C C D L + C EANL +P +++ ++ + L++N I+T+ ++ + Y LQ + L
Sbjct: 101 PMHCLCRD--LELDCDEANLRAVP-SVSSNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCL 157
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
+N++ ++ + F L +L L+HN+++ + F L L+ L + N L +
Sbjct: 158 QNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLT 217
Query: 227 FAPLSHLEELDLGQNRISRI-DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L+ L L L N ++R+ D+ + + L L + N++ ++ +FI L L
Sbjct: 218 FYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLV 277
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N L + AF L +L LDL + N+
Sbjct: 278 MRKNKINHLNEHAFTHLQKLDELDLGSNKIENL 310
Score = 165 (63.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 49/173 (28%), Positives = 85/173 (49%)
Query: 138 IQRLVLKYNRIKTVDSAIQFY--SSLQHVDLSHNQLVNIPIRGF-EPQEKLVELQLNHNK 194
++ L+++ N + + S + FY +SL + L +N L +P + + +L L N+
Sbjct: 200 LEWLIIEDNHLSRI-SPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNR 258
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ ++ N TFI +L VL +R N + L + F L L+ELDLG N+I + F+ L
Sbjct: 259 IHNLRNLTFISCNNLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDL 318
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLS 306
L L + N ++ + F YL L L + G+ + + + F L LS
Sbjct: 319 KELSQLNISYNPIQKIEVNQFDYLAKLKSLSLEGIEI-SNIQQRMFRPLINLS 370
Score = 144 (55.7 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 46/184 (25%), Positives = 88/184 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ +L L +NRI + + + L+ + + N L I F L+ L L +N L
Sbjct: 175 SLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNAL 234
Query: 196 SSVNNKTFIG-LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ + +K + L L+ GN + +L + F ++L L + +N+I+ +++ F L
Sbjct: 235 TRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHAFTHL 294
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L N++ ++P F L L++L + N + F+ L +L +L L G
Sbjct: 295 QKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDYLAKLKSLSLEGIE 354
Query: 315 LTNM 318
++N+
Sbjct: 355 ISNI 358
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S++ + L N + +P F L +L L +NK+ SV+ F GL SL L L N
Sbjct: 126 SNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNR 185
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT-PSFIY 277
+ L +F L LE L + N +SRI F GL +L +L L +N L +P P +
Sbjct: 186 ITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQH 245
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ L L N L + F L+ L +R + ++ H+
Sbjct: 246 MPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHA 290
Score = 136 (52.9 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 43/152 (28%), Positives = 74/152 (48%)
Query: 129 VIPIT---LNPSIQRLVLKYNRIKTV-DSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQE 183
+ P+T LN S+ LVL N + + D + Q L +D N++ N+ F
Sbjct: 213 ISPLTFYGLN-SLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCN 271
Query: 184 KLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
L L + NK++ +N F L+ L L+L N +E+LP +F L L +L++ N I
Sbjct: 272 NLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPI 331
Query: 244 SRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
+I+ F+ L L+ L L+ ++ ++ F
Sbjct: 332 QKIEVNQFDYLAKLKSLSLEGIEISNIQQRMF 363
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 27/97 (27%), Positives = 52/97 (53%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
LV++ N+I ++ A L +DL N++ N+P F+ ++L +L +++N + +
Sbjct: 276 LVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIE 335
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEEL 236
F L LK L+L G + ++ R+F PL +L +
Sbjct: 336 VNQFDYLAKLKSLSLEGIEISNIQQRMFRPLINLSHI 372
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 199 (75.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/184 (32%), Positives = 96/184 (52%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYS---SLQHVDLSH-----NQLVNI-PIRGFEPQEKLVEL 188
IQ + L +N I T+ + F + +L+ ++LS L ++ P+ P +L+ L
Sbjct: 648 IQEISLSFNDI-TIHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWL 706
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAP--LSHLEELDLGQNRISRI 246
L++N L V+N++F ++ L +NL N L+ LP LF SHL E+DL N + R+
Sbjct: 707 GLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERL 766
Query: 247 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 306
+ F L L+ L L N+LR++ +F L L L + N ++ GAF L L+
Sbjct: 767 EAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLA 826
Query: 307 ALDL 310
ALDL
Sbjct: 827 ALDL 830
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 60/178 (33%), Positives = 93/178 (52%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+Q L L+ NR++T+ A L+++DLS+N+LVNI F L L L HN+L
Sbjct: 777 LQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLC 836
Query: 197 SVNNKTFIGLKSLKV---LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
S++ K+F+ + + LN+ N + D L + + ++ +LD+ N +++ D F
Sbjct: 837 SLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYM-YIYQLDISHNHVTKSDS--FTN 893
Query: 254 LT-ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L LR L L NQL S+ + +F L L L V N T+L +F GL L LDL
Sbjct: 894 LANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDL 951
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 48/153 (31%), Positives = 80/153 (52%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSS 197
I +L + +N + DS ++L+ ++L+HNQL ++ F E L L + HN L+S
Sbjct: 875 IYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTS 934
Query: 198 VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL 257
+ ++F GL SL+ L+L N L+ L F+ L L L + NR+ + + F T L
Sbjct: 935 LRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMN-TRL 993
Query: 258 RILYLDDNQLRSVPTPSFIYLGM-LAELRVGLN 289
L + +NQL P P+F +G L +++ N
Sbjct: 994 EFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHN 1026
Score = 178 (67.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 50/165 (30%), Positives = 81/165 (49%)
Query: 140 RLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVE-LQLNHNKLSSV 198
RL + +N I + + Y + +D+SHN + F + L L HN+L S+
Sbjct: 854 RLNVSHNHIASFYDELSSYMYIYQLDISHNHVTKSD--SFTNLANTLRFLNLAHNQLGSL 911
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
+ F L+ L++LN+ N L L R F L+ L+ELDL N++ ++ F L LR
Sbjct: 912 QSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLR 971
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 303
IL ++ N+LR++P F+ L L + N + AF +G
Sbjct: 972 ILRINSNRLRALPREVFMNT-RLEFLDIAENQLSVWPVPAFTDIG 1015
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 50/142 (35%), Positives = 70/142 (49%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGF---EPQEKLVELQLNHNKLS 196
L L N +K V + + L +++LS NQL +P RG + LVE+ L++N L
Sbjct: 706 LGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLP-RGLFQSDAHSHLVEIDLSYNGLE 764
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ +TF L L+ LNL+ N L + F L L LDL NR+ I F L
Sbjct: 765 RLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPN 824
Query: 257 LRILYLDDNQLRSVPTPSFIYL 278
L L L NQL S+ SF+Y+
Sbjct: 825 LAALDLMHNQLCSLSLKSFLYV 846
Score = 148 (57.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 50/162 (30%), Positives = 81/162 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DLS+N++ ++ + P+ LV + L+ N L+ + F L L++++LR N + +
Sbjct: 382 LDLSNNRIYHVA-GNYLPRS-LVTMDLSSNLLTVFPQQLFEQLPELRIVSLRDNLIRSVQ 439
Query: 224 --DRLFAPLS-HLEELDLGQNRISRIDQACFEGLTA---LRILYLDDNQLRSVPTPSFIY 277
+ PL HLE LDLGQN I ++ F+ + LR L L+ N + +P F
Sbjct: 440 WKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVTQLPEAVFKA 499
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTNM 318
G +A L + N + + AF GL L LDL LT +
Sbjct: 500 TG-IAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTV 540
Score = 130 (50.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 53/196 (27%), Positives = 95/196 (48%)
Query: 127 LDVIPITLNPSIQRL-VLKYN--RIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGF-EPQ 182
LD + + ++++L +L+ N R++ + + + L+ +D++ NQL P+ F +
Sbjct: 956 LDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIG 1015
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
L +Q++HN L ++ FI + L ++L N + LPD F+ L++L LDL QN
Sbjct: 1016 FTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNP 1075
Query: 243 ISRID-QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 301
+ + + F LR L L L +P P + L +L+ L V N L+
Sbjct: 1076 LVTTNLREVFVHTPRLRKLSLHHMGLYVLP-P--LKLPLLSYLDVSGNYLQELSP--LGS 1130
Query: 302 LGRLSALDLRGAGLTN 317
L L +++ LTN
Sbjct: 1131 LRHLRHVNVSHNKLTN 1146
Score = 123 (48.4 bits), Expect = 0.00040, P = 0.00040
Identities = 54/209 (25%), Positives = 96/209 (45%)
Query: 116 ETLVVTCKEAN-LDVIPITLNP--SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLV 172
ETL E N L +P+ L+ ++ L L N+I +++ F +L+ + LS N
Sbjct: 525 ETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQLNNLPSFTENLRVLSLSGNNFS 584
Query: 173 NIPIRGFEPQEKLVELQLNHNKLSSVNNKTFI----GLKSLKVLNLRGNFLEDLPDRLFA 228
IP+ G + +L L + +N ++ + F G +L+ + LR N + L FA
Sbjct: 585 MIPVLGLKNYTQLSYLNMGYNSITDIPEGIFAVDSWG-SNLQTILLRNNKITHLHLGSFA 643
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLT-ALRILYLD-----DNQLRSV-PTPSFIYLGML 281
L ++E+ L N I+ FE ++ L+IL L L S+ P + + L L
Sbjct: 644 GLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQL 703
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N +++ +F + LS ++L
Sbjct: 704 IWLGLDNNNLKQVSNESFAQMRELSYINL 732
>UNIPROTKB|F1PE17 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060658 "nipple morphogenesis" evidence=IEA]
[GO:0060427 "lung connective tissue development" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50262
PROSITE:PS51450 GO:GO:0016021 GO:GO:0030154 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
GO:GO:0007188 GO:GO:0007567 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0060427 OMA:YTLTTRP GO:GO:0060658
GeneTree:ENSGT00650000093266 EMBL:AAEX03010082 EMBL:AAEX03010083
ProteinModelPortal:F1PE17 Ensembl:ENSCAFT00000013759 Uniprot:F1PE17
Length = 696
Score = 195 (73.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 59/213 (27%), Positives = 104/213 (48%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDL 166
P C C L V C E NL +P +++ ++ + L++N I+ + + Y +LQ + L
Sbjct: 39 PMQCVCRG--LEVDCDETNLRAVP-SVSSNVTLMSLRWNLIRKLPPDGFRKYHNLQKLCL 95
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
+N++ +IPI F L +L L+HN+++ + F L L+ L + N L +
Sbjct: 96 QNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLT 155
Query: 227 FAPLSHLEELDLGQNRISRI-DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L+ L L L N ++ + D+ + + L L L+DN + ++ +FI G L L
Sbjct: 156 FYGLNSLILLALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHNLRNLTFISCGNLTVLV 215
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N L + F L +L+ LDL + N+
Sbjct: 216 MRKNKINHLNENTFAPLQKLAELDLGSNKIENL 248
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 53/173 (30%), Positives = 87/173 (50%)
Query: 138 IQRLVLKYNRIKTVDSAIQFY--SSLQHVDLSHNQLVNIPIRGF-EPQEKLVELQLNHNK 194
++ L+++ N + + S + FY +SL + L +N L ++P + + +L L L N
Sbjct: 138 LEWLIIEDNHLSRI-SPLTFYGLNSLILLALMNNVLTHLPDKPLCQYMPRLHWLDLEDNH 196
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ ++ N TFI +L VL +R N + L + FAPL L ELDLG N+I + F+ L
Sbjct: 197 IHNLRNLTFISCGNLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDL 256
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLS 306
L L L N ++ + F YL L L + G+ + + + F L LS
Sbjct: 257 KELSQLNLSYNPIQKIQADQFDYLVKLKSLSLEGIEI-SNIQQRMFRPLMNLS 308
Score = 147 (56.8 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 51/167 (30%), Positives = 78/167 (46%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S++ + L N + +P GF L +L L +NK+ S+ F GL SL L L N
Sbjct: 64 SNVTLMSLRWNLIRKLPPDGFRKYHNLQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNR 123
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT-PSFIY 277
+ L +F L LE L + N +SRI F GL +L +L L +N L +P P Y
Sbjct: 124 ITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLALMNNVLTHLPDKPLCQY 183
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
+ L L + N L + F G L+ L +R + ++ ++ A
Sbjct: 184 MPRLHWLDLEDNHIHNLRNLTFISCGNLTVLVMRKNKINHLNENTFA 230
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 129 VIPIT---LNPSIQRLVLKYNRIKTV-DSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQE 183
+ P+T LN S+ L L N + + D + Q+ L +DL N + N+ F
Sbjct: 151 ISPLTFYGLN-SLILLALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHNLRNLTFISCG 209
Query: 184 KLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
L L + NK++ +N TF L+ L L+L N +E+LP ++F L L +L+L N I
Sbjct: 210 NLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLNLSYNPI 269
Query: 244 SRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
+I F+ L L+ L L+ ++ ++ F
Sbjct: 270 QKIQADQFDYLVKLKSLSLEGIEISNIQQRMF 301
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/217 (25%), Positives = 98/217 (45%)
Query: 108 PPDCDCNDETLVVTCKEAN-LDVIPITLNP---SIQRLVLKYNRIKTVDSAI-QFYSSLQ 162
PPD L C + N + IPI S+ +L L +NRI + + + L+
Sbjct: 80 PPDGFRKYHNLQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLE 139
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIG-LKSLKVLNLRGNFLED 221
+ + N L I F L+ L L +N L+ + +K + L L+L N + +
Sbjct: 140 WLIIEDNHLSRISPLTFYGLNSLILLALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHN 199
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L + F +L L + +N+I+ +++ F L L L L N++ ++P F L L
Sbjct: 200 LRNLTFISCGNLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKEL 259
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
++L + N + F+ L +L +L L G ++N+
Sbjct: 260 SQLNLSYNPIQKIQADQFDYLVKLKSLSLEGIEISNI 296
Score = 117 (46.2 bits), Expect = 0.00077, P = 0.00077
Identities = 27/97 (27%), Positives = 53/97 (54%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
LV++ N+I + ++ L +DL N++ N+P + F+ ++L +L L++N + +
Sbjct: 214 LVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLNLSYNPIQKIQ 273
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEEL 236
F L LK L+L G + ++ R+F PL +L +
Sbjct: 274 ADQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 310
>MGI|MGI:2682211 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor
1" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=ISO;ISA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IGI;IDA] [GO:0007189
"adenylate cyclase-activating G-protein coupled receptor signaling
pathway" evidence=ISO] [GO:0007567 "parturition" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0042562 "hormone binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IMP] [GO:0060658 "nipple
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 MGI:MGI:2682211 GO:GO:0016021 GO:GO:0005886
GO:GO:0030154 GO:GO:0046872 GO:GO:0004930 GO:GO:0007189
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030198
GO:GO:0042562 GO:GO:0007188 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372
SMART:SM00013 HSSP:P01130 GO:GO:0060427 CTD:59350
HOVERGEN:HBG026354 KO:K04306 OMA:YTLTTRP GO:GO:0060658
EMBL:AY509975 EMBL:AY255542 IPI:IPI00417064 RefSeq:NP_997617.1
UniGene:Mm.331086 ProteinModelPortal:Q6R6I7 SMR:Q6R6I7
STRING:Q6R6I7 PhosphoSite:Q6R6I7 PRIDE:Q6R6I7
Ensembl:ENSMUST00000078527 GeneID:381489 KEGG:mmu:381489
UCSC:uc008pnv.1 GeneTree:ENSGT00650000093266 HOGENOM:HOG000049056
InParanoid:Q6R6I7 OrthoDB:EOG4NGGM1 ChiTaRS:RXFP1 NextBio:402138
Bgee:Q6R6I7 CleanEx:MM_RXFP1 Genevestigator:Q6R6I7 Uniprot:Q6R6I7
Length = 758
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 68/217 (31%), Positives = 103/217 (47%)
Query: 110 DCDCNDETL-VVTCKEANLDVIPI------TLNPS-------IQRLVLKYNRIKTVD-SA 154
+ DC++ L V +N+ V+ + TL P+ +Q+L L+ NRI +V SA
Sbjct: 110 ELDCDEANLRAVPSVSSNVTVMSLQRNFIRTLPPNGFRKYHELQKLCLQNNRIHSVSVSA 169
Query: 155 IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNL 214
+ SL + LSHN++ + FE +L L + N LS ++ TF GL SL +L L
Sbjct: 170 FRGLRSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVL 229
Query: 215 RGNFLEDLPDR-LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP 273
N L LPD+ L + L LD NRI + F L +L + N++ +
Sbjct: 230 MNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINYLNEH 289
Query: 274 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+F +L L EL +G N L F L LS L++
Sbjct: 290 AFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNI 326
Score = 185 (70.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 57/213 (26%), Positives = 104/213 (48%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDL 166
P C C D L + C EANL +P +++ ++ + L+ N I+T+ + + Y LQ + L
Sbjct: 101 PMHCLCRD--LELDCDEANLRAVP-SVSSNVTVMSLQRNFIRTLPPNGFRKYHELQKLCL 157
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
+N++ ++ + F L +L L+HN+++ + F L L+ L + N L +
Sbjct: 158 QNNRIHSVSVSAFRGLRSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLT 217
Query: 227 FAPLSHLEELDLGQNRISRI-DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L+ L L L N ++R+ D+ + + L L + N++ ++ +FI L L
Sbjct: 218 FYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLV 277
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ N L + AF L +L LDL + N+
Sbjct: 278 MRKNKINYLNEHAFTHLQKLDELDLGSNKIENL 310
Score = 154 (59.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 138 IQRLVLKYNRIKTVDSAIQFY--SSLQHVDLSHNQLVNIPIRGF-EPQEKLVELQLNHNK 194
++ L+++ N + + S + FY +SL + L +N L +P + + +L L N+
Sbjct: 200 LEWLIIEDNHLSRI-SPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNR 258
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ ++ N TFI +L VL +R N + L + F L L+ELDLG N+I + F+ L
Sbjct: 259 IHNLRNLTFISCNNLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDL 318
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLS 306
L L + N ++ + F L L L + G+ + + + F L LS
Sbjct: 319 KELSQLNISYNPIQKIEVNQFDCLAKLKSLSLEGIEI-SNIQQRMFRPLINLS 370
Score = 147 (56.8 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 49/165 (29%), Positives = 77/165 (46%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S++ + L N + +P GF +L +L L +N++ SV+ F GL+SL L L N
Sbjct: 126 SNVTVMSLQRNFIRTLPPNGFRKYHELQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSHNR 185
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT-PSFIY 277
+ L +F L LE L + N +SRI F GL +L +L L +N L +P P +
Sbjct: 186 ITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQH 245
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
+ L L N L + F L+ L +R + + H+
Sbjct: 246 MPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINYLNEHA 290
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 46/184 (25%), Positives = 88/184 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S+ +L L +NRI + + + L+ + + N L I F L+ L L +N L
Sbjct: 175 SLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNAL 234
Query: 196 SSVNNKTFIG-LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ + +K + L L+ GN + +L + F ++L L + +N+I+ +++ F L
Sbjct: 235 TRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINYLNEHAFTHL 294
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L L L N++ ++P F L L++L + N + F+ L +L +L L G
Sbjct: 295 QKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDCLAKLKSLSLEGIE 354
Query: 315 LTNM 318
++N+
Sbjct: 355 ISNI 358
Score = 135 (52.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 43/152 (28%), Positives = 74/152 (48%)
Query: 129 VIPIT---LNPSIQRLVLKYNRIKTV-DSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQE 183
+ P+T LN S+ LVL N + + D + Q L +D N++ N+ F
Sbjct: 213 ISPLTFYGLN-SLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCN 271
Query: 184 KLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
L L + NK++ +N F L+ L L+L N +E+LP +F L L +L++ N I
Sbjct: 272 NLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPI 331
Query: 244 SRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
+I+ F+ L L+ L L+ ++ ++ F
Sbjct: 332 QKIEVNQFDCLAKLKSLSLEGIEISNIQQRMF 363
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 27/97 (27%), Positives = 52/97 (53%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
LV++ N+I ++ A L +DL N++ N+P F+ ++L +L +++N + +
Sbjct: 276 LVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIE 335
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEEL 236
F L LK L+L G + ++ R+F PL +L +
Sbjct: 336 VNQFDCLAKLKSLSLEGIEISNIQQRMFRPLINLSHI 372
>RGD|1359464 [details] [associations]
symbol:Lrg1 "leucine-rich alpha-2-glycoprotein 1" species:10116
"Rattus norvegicus" [GO:0005615 "extracellular space" evidence=ISO]
[GO:0050873 "brown fat cell differentiation" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 RGD:1359464
CTD:116844 HOVERGEN:HBG000045 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 EMBL:BC088434 IPI:IPI00393521
RefSeq:NP_001009717.1 UniGene:Rn.17847 ProteinModelPortal:Q5I0E1
GeneID:367455 KEGG:rno:367455 NextBio:691280 Genevestigator:Q5I0E1
Uniprot:Q5I0E1
Length = 332
Score = 188 (71.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/183 (30%), Positives = 86/183 (46%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q L L NR++ + + L+ +DL+ N L ++P F L L L N+
Sbjct: 75 PGLQELHLSSNRLQELSPGLLAPVPRLRVLDLTRNALRSLPPGLFRSSAALNTLVLRENQ 134
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L + + GL +L L+L N L LP RL A L L LDLG N + + + G
Sbjct: 135 LQEASARWLQGLDALGYLDLAENRLRSLPARLLANLGALHTLDLGHNLLESLPEGFLRGP 194
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L+ L+L+ N+L+ + L L + N T +A +F GL +L LDL
Sbjct: 195 RRLQRLHLEGNRLQRLEAGLLAPQPFLGVLFLNDNQLTAVAADSFRGLKQLDMLDLSNNS 254
Query: 315 LTN 317
L++
Sbjct: 255 LSS 257
Score = 184 (69.8 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 59/195 (30%), Positives = 90/195 (46%)
Query: 141 LVLKYNRIKTVD--SAIQFYSSLQ----HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
L+L+ + TV +F SSL H+ + + L +P + L EL L+ N+
Sbjct: 27 LILQSVKGSTVSCHGPTEFPSSLPADTVHLSVEFSSLTQLPAAALQGCPGLQELHLSSNR 86
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ + L+VL+L N L LP LF + L L L +N++ +GL
Sbjct: 87 LQELSPGLLAPVPRLRVLDLTRNALRSLPPGLFRSSAALNTLVLRENQLQEASARWLQGL 146
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
AL L L +N+LRS+P LG L L +G N+ +L +G G RL L L G
Sbjct: 147 DALGYLDLAENRLRSLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGNR 206
Query: 315 LTNMMGHSMALGDYL 329
L + +A +L
Sbjct: 207 LQRLEAGLLAPQPFL 221
Score = 159 (61.0 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 52/171 (30%), Positives = 80/171 (46%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSS--LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
P ++ L L N ++++ + F SS L + L NQL R + + L L L N
Sbjct: 99 PRLRVLDLTRNALRSLPPGL-FRSSAALNTLVLRENQLQEASARWLQGLDALGYLDLAEN 157
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+L S+ + L +L L+L N LE LP+ L+ L L NR+ R++
Sbjct: 158 RLRSLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGNRLQRLEAGLLAP 217
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
L +L+L+DNQL +V SF L L L + N ++ G + LGR
Sbjct: 218 QPFLGVLFLNDNQLTAVAADSFRGLKQLDMLDLSNNSLSSTPPGLWAFLGR 268
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 51/163 (31%), Positives = 81/163 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQ 162
S CP C C++ +V C+ L IP L I + L+ N IK++ + A Y L+
Sbjct: 277 SLSCPSACSCSNN--IVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLK 334
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+D+S NQ+ +I F+ + L L L NK++ + F GL SL++L L N + L
Sbjct: 335 RIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCL 394
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L +++ L+L N
Sbjct: 395 RVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQN 437
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 56/189 (29%), Positives = 93/189 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSL 161
+A CP C C+ + V C L +P + + +RL L N I + + + F +L
Sbjct: 31 AAACPTKCTCSAAS--VDCHGLGLRAVPRGIPRNAERLDLDRNNITRI-TKMDFAGLKNL 87
Query: 162 QHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
+ + L NQ V+I RG F+ ++L L+LN NKL + F L L+L N ++
Sbjct: 88 RVLHLEDNQ-VSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
+P + F ++ ++ L L N IS I+ F L L IL L++N + + SF ++
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 281 LAELRVGLN 289
+ LR+ N
Sbjct: 207 IRTLRLHSN 215
Score = 183 (69.5 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSL 161
Q S CP C C ET VV C L +P + + L L+ N + V + + L
Sbjct: 720 QLSPRCPEQCTCV-ET-VVRCSNRGLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQL 777
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+DLS+N + + F L L L++N+L + F GL+SL+VL L GN +
Sbjct: 778 TLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISS 837
Query: 222 LPDRLFAPLSHLEELDLGQN 241
+P+ F L+ L L LG N
Sbjct: 838 VPEGSFNDLTSLSHLALGTN 857
Score = 175 (66.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 51/161 (31%), Positives = 77/161 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--SLQHV 164
CP C C E +V C L IP L L L N I +++ F +L+ +
Sbjct: 505 CPEKCRC--EGTIVDCSNQKLARIPSHLPEYTTDLRLNDNDISVLEATGIFKKLPNLRKI 562
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ + F+ + EL L N+L +++ + F GL SLK L LR N + + +
Sbjct: 563 NLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISCVSN 622
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
FA LS + L L NRI+ I F L +L + L N
Sbjct: 623 DTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 45/149 (30%), Positives = 72/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL N + I F + L L L N++S + F LK L+ L L N L+
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQV 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N+I I + F G+T ++ L LD+N + + +F L L
Sbjct: 124 LPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + + +FN + ++ L L
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 41/128 (32%), Positives = 67/128 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N + +IP F +KL + ++ N++S + F GLKSL L L GN + ++P
Sbjct: 312 IRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 371
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L L+ L L N+I+ + F+ L L +L L DN+L+++ F+ L +
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQT 431
Query: 284 LRVGLNVF 291
L + N F
Sbjct: 432 LHLAQNPF 439
Score = 159 (61.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L+ N ++ + F GLK+L+VL+L N + + F L LE L L +N++ +
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ L L L +NQ++ +P +F + + L++ N + + DGAF L L
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 308 LDLRGAGLTNMM 319
L L ++ ++
Sbjct: 186 LTLNNNNISRIL 197
Score = 153 (58.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ N++ ++ A Q L+ + L+ N+L +P F+ KL L L+ N++
Sbjct: 86 NLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ K F G+ +K L L N + + D F L LE L L N ISRI F +
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 256 ALRILYLDDNQL 267
+R L L N L
Sbjct: 206 KIRTLRLHSNHL 217
Score = 148 (57.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 44/126 (34%), Positives = 66/126 (52%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L N L++V K + L +++L N + L
Sbjct: 736 VRCSNRGLHALP-KGM-PKD-VTELYLEGNHLTAVP-KELSAFRQLTLIDLSNNSISMLT 791
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ +SHL L L NR+ I F GL +LR+L L N + SVP SF L L+
Sbjct: 792 NHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSH 851
Query: 284 LRVGLN 289
L +G N
Sbjct: 852 LALGTN 857
Score = 147 (56.8 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 43/140 (30%), Positives = 72/140 (51%)
Query: 166 LSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L+ N + + G F+ L ++ L++N++ V F G ++ L L GN LE +
Sbjct: 539 LNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHG 598
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
R+F LS L+ L L N IS + F GL+++R+L L DN++ ++ +F L L+ +
Sbjct: 599 RMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTI 658
Query: 285 RVGLNVFTTLADGAFNGLGR 304
+ N F A+ LGR
Sbjct: 659 NLLSNPFNCNCHMAW--LGR 676
Score = 140 (54.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 44/147 (29%), Positives = 70/147 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E +VE++L N + S+ F K LK +++ N + D+
Sbjct: 291 VDCRGKGLTEIPAN--LP-EGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 347
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ I + F+GL +L++L L+ N++ + +F L L
Sbjct: 348 PDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNL 407
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N T++ G F L + L L
Sbjct: 408 LSLYDNKLQTISKGLFVPLQSIQTLHL 434
Score = 121 (47.7 bits), Expect = 0.00071, P = 0.00071
Identities = 36/104 (34%), Positives = 51/104 (49%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN L +P L A L +DL N IS + F ++ L L L N+
Sbjct: 752 KDVTELYLEGNHLTAVPKELSA-FRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNR 810
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR +P +F L L L + N +++ +G+FN L LS L L
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 83 (34.3 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
EG+ +R L+ N ++S+P +F L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 312 GAGLTNM 318
G +T +
Sbjct: 364 GNKITEI 370
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 45/135 (33%), Positives = 72/135 (53%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C L V+P + + L L N+ V + Y L +DL
Sbjct: 729 CPAECTCLDT--VVRCSNKALKVLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLTLIDL 786
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ + + F +L+ L L++N+L + +TF GLKSL++L+L GN + +P+
Sbjct: 787 SNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGA 846
Query: 227 FAPLSHLEELDLGQN 241
F L+ L L +G N
Sbjct: 847 FNDLAALSHLAIGAN 861
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C++ +V C+ L IP L +I + L+ N IK + A Y L+ +D
Sbjct: 275 CPAACTCSNN--IVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRID 332
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS+NQ+ + F+ L L L NK++ + F GL SL++L L N + L
Sbjct: 333 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 392
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L A++ ++L N
Sbjct: 393 AFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 432
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 51/186 (27%), Positives = 84/186 (45%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV-- 164
CP C C+ T V C L +P + + +RL L N I + ++ L+H+
Sbjct: 28 CPAQCSCSGST--VDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRV 83
Query: 165 -DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L N++ I F+ ++L L+LN N L F+G L L+L N ++ +P
Sbjct: 84 LQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIP 143
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F ++ L L N IS I+ F L L +L L++N + + SF ++ L
Sbjct: 144 RKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 203
Query: 284 LRVGLN 289
R+ N
Sbjct: 204 FRLHSN 209
Score = 176 (67.0 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 55/167 (32%), Positives = 84/167 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP PQ EL+LN+N+ + + F L L+ +N N + D+
Sbjct: 519 VDCSNQKLTKIP--DHIPQYT-AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI 575
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F S + E+ L NR+ + F+GL +L+ L L N++ V SFI L +
Sbjct: 576 EEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVR 635
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+A GAF+ L LS L+L A N + LG++L
Sbjct: 636 LLSLYDNQITTIAPGAFDTLHSLSTLNLL-ANPFNCNCYLAWLGEWL 681
Score = 174 (66.3 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 48/154 (31%), Positives = 72/154 (46%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL+ N + I F L LQL NK++++ F LK L+ L L N L+
Sbjct: 58 ERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQL 117
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
P+ LF S L LDL +N+I I + F G ++ L LD N + + +F L L
Sbjct: 118 FPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDL 177
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L + N T L+ +FN + +L L L
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 211
Score = 167 (63.8 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 50/162 (30%), Positives = 75/162 (46%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--S 160
A CP C C T V C L IP + L L N +++ F
Sbjct: 504 ADLACPEKCRCEGTT--VDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQ 561
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ ++ S+N++ +I FE + E+ L N+L +V +K F GL+SLK L LR N +
Sbjct: 562 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 621
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
+ + F LS + L L N+I+ I F+ L +L L L
Sbjct: 622 CVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNL 663
Score = 165 (63.1 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 42/132 (31%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + IP F P +KL + L++N++S + F GL+SL L L GN +
Sbjct: 303 TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 362
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+LP LF L L+ L L N+I+ + F+ L L +L L DN+L+++ +F L
Sbjct: 363 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 422
Query: 280 MLAELRVGLNVF 291
+ + + N F
Sbjct: 423 AIQTMHLAQNPF 434
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 51/186 (27%), Positives = 83/186 (44%)
Query: 133 TLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
TL+ S+ ++ N + Q S VD L ++P R P+ L LN
Sbjct: 8 TLSLSLGLVLAILNEVAPQACPAQCSCSGSTVDCHGLALRSVP-RNI-PRNT-ERLDLNG 64
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
N ++ + F GL+ L+VL L N + + F L LE L L +N + + F
Sbjct: 65 NNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFL 124
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
G + L L L +NQ++++P +F + L++ N + + DGAF L L L L
Sbjct: 125 GTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNN 184
Query: 313 AGLTNM 318
+T +
Sbjct: 185 NNITRL 190
Score = 149 (57.5 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 42/128 (32%), Positives = 59/128 (46%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N+I T++ A Q L+ + L+ N L P F KL L L+ N++ ++
Sbjct: 84 LQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIP 143
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
K F G +K L L N + + D F L LE L L N I+R+ A F + LR
Sbjct: 144 RKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRT 203
Query: 260 LYLDDNQL 267
L N L
Sbjct: 204 FRLHSNNL 211
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E + E++L N + + F K L+ ++L N + +L
Sbjct: 286 VDCRGKGLTEIPTN--LP-ETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELA 342
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ + ++ FEGL +L++L L+ N++ + +F L L
Sbjct: 343 PDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 402
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL-RGAGLTNMMGHSMALGDYLH 330
L + N T+A G F+ L + + L + + + H L DYLH
Sbjct: 403 LSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC--HLKWLADYLH 448
Score = 130 (50.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 169 NQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFA 228
N+ + + +G P++ + EL L+ N+ + V K K L +++L N + L ++ F+
Sbjct: 744 NKALKVLPKGI-PRD-VTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLSNQSFS 800
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 288
++ L L L NR+ I F+GL +LR+L L N + VP +F L L+ L +G
Sbjct: 801 NMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAIGA 860
Query: 289 N 289
N
Sbjct: 861 N 861
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 32/107 (29%), Positives = 57/107 (53%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P ++++ N+I ++ A + S + + L+ N+L N+ + F+ E L L L N+
Sbjct: 560 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 619
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
+S V N +FIGL S+++L+L N + + F L L L+L N
Sbjct: 620 ISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLAN 666
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 38/102 (37%), Positives = 51/102 (50%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L L GN +P L + HL +DL NRIS + F +T L L L N+LR +P
Sbjct: 761 LYLDGNQFTLVPKEL-SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 819
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+F L L L + N + + +GAFN L LS L + GA
Sbjct: 820 PRTFDGLKSLRLLSLHGNDISVVPEGAFNDLAALSHLAI-GA 860
>MGI|MGI:2661375 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0031103 "axon
regeneration" evidence=TAS] [GO:0031225 "anchored to membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO] [GO:0046658
"anchored to plasma membrane" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2661375 GO:GO:0016021 GO:GO:0009897
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0045121 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GO:GO:0031103 EMBL:AL603905
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OMA:NCTSHRN OrthoDB:EOG4FXR7G
EMBL:AY250218 EMBL:AK033286 EMBL:AK140456 EMBL:BC030471
EMBL:BK001304 IPI:IPI00169628 RefSeq:NP_808376.1 UniGene:Mm.82661
ProteinModelPortal:Q8K0S5 SMR:Q8K0S5 STRING:Q8K0S5 PRIDE:Q8K0S5
Ensembl:ENSMUST00000102514 GeneID:237847 KEGG:mmu:237847
UCSC:uc007kdh.1 eggNOG:NOG254142 InParanoid:Q8K0S5 NextBio:383518
Bgee:Q8K0S5 CleanEx:MM_RTN4RL1 Genevestigator:Q8K0S5
GermOnline:ENSMUSG00000045287 Uniprot:Q8K0S5
Length = 445
Score = 190 (71.9 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 67/219 (30%), Positives = 96/219 (43%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP DC C + V+C+ N IP + +R+ L+ NRI + F ++ + +
Sbjct: 25 CPRDCVCYPAPMTVSCQAHNFAAIPEGIPEDSERIFLQNNRITFLQQG-HFSPAMVTLWI 83
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
N + I FE L EL L N+ L ++ +TF GL L L L L LP
Sbjct: 84 YSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYKCGLSALPAG 143
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L L+ L L N I + F L L L+L N+L S+ F L L L
Sbjct: 144 IFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVNLDRLL 203
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
+ N + AF+ L RL+ L L LT + G +A
Sbjct: 204 LHENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLA 242
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 57/180 (31%), Positives = 83/180 (46%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHN-QLVNIPIRGFEPQEKLVELQLNH 192
+P++ L + N I + + + + L+ +DL N QL + F+ KL L L
Sbjct: 75 SPAMVTLWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYK 134
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
LS++ F GL SL+ L L+ N +E L D +F L +L L L N++ + Q F
Sbjct: 135 CGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFR 194
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
GL L L L +NQL+ V +F L L L + N T L L L L L G
Sbjct: 195 GLVNLDRLLLHENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLAPLVALEFLRLNG 254
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 197 (74.4 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 52/164 (31%), Positives = 82/164 (50%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA--IQFYSSL 161
S CP C C++ +V C+ L IP L I + L+ N IK++ + IQ Y L
Sbjct: 277 SLSCPSACSCSNN--IVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQ-YKKL 333
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +D+S NQ+ +I F+ + L L L NK++ + F GL SL++L L N +
Sbjct: 334 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINC 393
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
L F L +L L L N++ I + F L +++ L+L N
Sbjct: 394 LRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 183 (69.5 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 55/189 (29%), Positives = 93/189 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSL 161
+A CP C C+ + V C L +P + + +RL L N I + + + F +L
Sbjct: 31 AAACPTKCTCSAAS--VDCHGLGLRAVPRGIPRNAERLDLDRNNITRI-TKMDFTGLKNL 87
Query: 162 QHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
+ + L NQ V++ RG F+ ++L L+LN NKL + F L L+L N ++
Sbjct: 88 RVLHLEDNQ-VSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
+P + F ++ ++ L L N IS I+ F L L IL L++N + + SF ++
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 281 LAELRVGLN 289
+ LR+ N
Sbjct: 207 IRTLRLHSN 215
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSL 161
Q S CP C C ET VV C L +P + + L L+ N + V + + L
Sbjct: 720 QLSPRCPEQCTCV-ET-VVRCSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQL 777
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+DLS+N + + F L L L++N+L + F GL+SL+VL L GN +
Sbjct: 778 TLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISS 837
Query: 222 LPDRLFAPLSHLEELDLGQN 241
+P+ F L+ L L LG N
Sbjct: 838 VPEGSFNDLTSLSHLALGIN 857
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/161 (31%), Positives = 76/161 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--SLQHV 164
CP C C E +V C L IP L L L N I +++ F +L+ +
Sbjct: 505 CPEKCRC--EGTIVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKKLPNLRKI 562
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ + F+ + EL L N+L +++ + F GL LK L LR N + + +
Sbjct: 563 NLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNN 622
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
FA LS + L L NRI+ I F L +L + L N
Sbjct: 623 DTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 45/149 (30%), Positives = 72/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL N + I F + L L L N++S + F LK L+ L L N L+
Sbjct: 64 ERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N+I I + F G+T ++ L LD+N + + +F L L
Sbjct: 124 LPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + + +FN + ++ L L
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 159 (61.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L+ N ++ + F GLK+L+VL+L N + + F L LE L L +N++ +
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ L L L +NQ++ +P +F + + L++ N + + DGAF L L
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 308 LDLRGAGLTNMM 319
L L ++ ++
Sbjct: 186 LTLNNNNISRIL 197
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/128 (32%), Positives = 66/128 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N + +IP F +KL + ++ N++S + F GLKSL L L GN + ++P
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 371
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L L+ L L N+I+ + F+ L L +L L DN+L+++ F L +
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 284 LRVGLNVF 291
L + N F
Sbjct: 432 LHLAQNPF 439
Score = 154 (59.3 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ N++ ++ A Q L+ + L+ N+L +P F+ KL L L+ N++
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ K F G+ +K L L N + + D F L LE L L N ISRI F +
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 256 ALRILYLDDNQL 267
+R L L N L
Sbjct: 206 KIRTLRLHSNHL 217
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 44/126 (34%), Positives = 67/126 (53%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L N L++V K + L +++L N + L
Sbjct: 736 VRCSNRGLHTLP-KGM-PKD-VTELYLEGNHLTAVP-KELSTFRQLTLIDLSNNSISMLT 791
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ +SHL L L NR+ I F GL +LR+L L N + SVP SF L L+
Sbjct: 792 NHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSH 851
Query: 284 LRVGLN 289
L +G+N
Sbjct: 852 LALGIN 857
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 45/159 (28%), Positives = 82/159 (51%)
Query: 147 RIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIG 205
++ + S + Y++ + L+ N + + G F+ L ++ L++N++ V F G
Sbjct: 522 KLSRIPSHLPEYTT--DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 206 LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
++ L L GN LE + R+F LS L+ L L N IS ++ F GL+++R+L L DN
Sbjct: 580 AAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDN 639
Query: 266 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
++ ++ +F L L+ + + N F A+ LGR
Sbjct: 640 RITTISPGAFTTLVSLSTINLLSNPFNCNCHMAW--LGR 676
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/147 (30%), Positives = 71/147 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E +VE++L N + S+ FI K LK +++ N + D+
Sbjct: 291 VDCRGKGLTEIPAN--LP-EGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIA 347
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ I + F+GL +L++L L+ N++ + +F L L
Sbjct: 348 PDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNL 407
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N T++ G F L + L L
Sbjct: 408 LSLYDNKLQTISKGLFAPLQSIQTLHL 434
Score = 141 (54.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 49/167 (29%), Positives = 81/167 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP P E +L+LN N ++ + F L +L+ +NL N ++++
Sbjct: 516 VDCSNQKLSRIP--SHLP-EYTTDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEV 572
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + ++EL L N++ + F GL+ L+ L L N + V +F L +
Sbjct: 573 REGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVR 632
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT++ GAF L LS ++L N H LG +L
Sbjct: 633 LLSLYDNRITTISPGAFTTLVSLSTINLLSNPF-NCNCHMAWLGRWL 678
Score = 88 (36.0 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
EG+ +R L+ N ++S+P +FI L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 312 GAGLTNM 318
G +T +
Sbjct: 364 GNKITEI 370
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 197 (74.4 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 52/164 (31%), Positives = 82/164 (50%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA--IQFYSSL 161
S CP C C++ +V C+ L IP L I + L+ N IK++ + IQ Y L
Sbjct: 277 SLSCPSACSCSNN--IVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQ-YKKL 333
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +D+S NQ+ +I F+ + L L L NK++ + F GL SL++L L N +
Sbjct: 334 KRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINC 393
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
L F L +L L L N++ I + F L +++ L+L N
Sbjct: 394 LRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 183 (69.5 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 55/189 (29%), Positives = 93/189 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSL 161
+A CP C C+ + V C L +P + + +RL L N I + + + F +L
Sbjct: 31 AAACPTKCTCSAAS--VDCHGLGLRAVPRGIPRNAERLDLDRNNITRI-TKMDFTGLKNL 87
Query: 162 QHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
+ + L NQ V++ RG F+ ++L L+LN NKL + F L L+L N ++
Sbjct: 88 RVLHLEDNQ-VSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
+P + F ++ ++ L L N IS I+ F L L IL L++N + + SF ++
Sbjct: 147 GIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 281 LAELRVGLN 289
+ LR+ N
Sbjct: 207 IRTLRLHSN 215
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSL 161
Q S CP C C ET VV C L +P + + L L+ N + V + + L
Sbjct: 720 QLSPRCPEQCTCV-ET-VVRCSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQL 777
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+DLS+N + + F L L L++N+L + F GL+SL+VL L GN +
Sbjct: 778 TLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISS 837
Query: 222 LPDRLFAPLSHLEELDLGQN 241
+P+ F L+ L L LG N
Sbjct: 838 VPEGSFNDLTSLSHLALGIN 857
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/161 (31%), Positives = 76/161 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--SLQHV 164
CP C C E +V C L IP L L L N I +++ F +L+ +
Sbjct: 505 CPEKCRC--EGTIVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKKLPNLRKI 562
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ + F+ + EL L N+L +++ + F GL LK L LR N + + +
Sbjct: 563 NLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNN 622
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
FA LS + L L NRI+ I F L +L + L N
Sbjct: 623 DTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 45/149 (30%), Positives = 72/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL N + I F + L L L N++S + F LK L+ L L N L+
Sbjct: 64 ERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N+I I + F G+T ++ L LD+N + + +F L L
Sbjct: 124 LPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + + +FN + ++ L L
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 159 (61.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L+ N ++ + F GLK+L+VL+L N + + F L LE L L +N++ +
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ L L L +NQ++ +P +F + + L++ N + + DGAF L L
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 308 LDLRGAGLTNMM 319
L L ++ ++
Sbjct: 186 LTLNNNNISRIL 197
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/128 (32%), Positives = 66/128 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N + +IP F +KL + ++ N++S + F GLKSL L L GN + ++P
Sbjct: 312 IRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIP 371
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L L+ L L N+I+ + F+ L L +L L DN+L+++ F L +
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 284 LRVGLNVF 291
L + N F
Sbjct: 432 LHLAQNPF 439
Score = 154 (59.3 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ N++ ++ A Q L+ + L+ N+L +P F+ KL L L+ N++
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ K F G+ +K L L N + + D F L LE L L N ISRI F +
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 256 ALRILYLDDNQL 267
+R L L N L
Sbjct: 206 KIRTLRLHSNHL 217
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 44/126 (34%), Positives = 67/126 (53%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P +G P++ + EL L N L++V K + L +++L N + L
Sbjct: 736 VRCSNRGLHTLP-KGM-PKD-VTELYLEGNHLTAVP-KELSTFRQLTLIDLSNNSISMLT 791
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ +SHL L L NR+ I F GL +LR+L L N + SVP SF L L+
Sbjct: 792 NHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSH 851
Query: 284 LRVGLN 289
L +G+N
Sbjct: 852 LALGIN 857
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 45/159 (28%), Positives = 82/159 (51%)
Query: 147 RIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIG 205
++ + S + Y++ + L+ N + + G F+ L ++ L++N++ V F G
Sbjct: 522 KLSRIPSHLPEYTT--DLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDG 579
Query: 206 LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
++ L L GN LE + R+F LS L+ L L N IS ++ F GL+++R+L L DN
Sbjct: 580 AAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDN 639
Query: 266 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
++ ++ +F L L+ + + N F A+ LGR
Sbjct: 640 RITTISPGAFTTLVSLSTINLLSNPFNCNCHMAW--LGR 676
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/147 (30%), Positives = 71/147 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L IP P E +VE++L N + S+ FI K LK +++ N + D+
Sbjct: 291 VDCRGKGLTEIPAN--LP-EGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIA 347
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ I + F+GL +L++L L+ N++ + +F L L
Sbjct: 348 PDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNL 407
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N T++ G F L + L L
Sbjct: 408 LSLYDNKLQTISKGLFAPLQSIQTLHL 434
Score = 141 (54.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 49/167 (29%), Positives = 81/167 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +L IP P E +L+LN N ++ + F L +L+ +NL N ++++
Sbjct: 516 VDCSNQKLSRIP--SHLP-EYTTDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEV 572
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + ++EL L N++ + F GL+ L+ L L N + V +F L +
Sbjct: 573 REGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVR 632
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT++ GAF L LS ++L N H LG +L
Sbjct: 633 LLSLYDNRITTISPGAFTTLVSLSTINLLSNPF-NCNCHMAWLGRWL 678
Score = 88 (36.0 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
EG+ +R L+ N ++S+P +FI L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 312 GAGLTNM 318
G +T +
Sbjct: 364 GNKITEI 370
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 62/216 (28%), Positives = 98/216 (45%)
Query: 113 CNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQL 171
C V C L IP L +I L L +N+++ + A YS L +D N +
Sbjct: 29 CTVRHEVADCSHLKLTQIPDDLPTNITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSI 88
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+ + L L L HN++S +++KTFI +L L+L N ++ + + F L
Sbjct: 89 SKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLK 148
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG--MLAELRVGLN 289
+L +LDL N +S L L+ L L +N++ S+ F +LG L L + N
Sbjct: 149 NLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSN 208
Query: 290 VFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMAL 325
+ G F+ LG LS L L A L+ + + L
Sbjct: 209 QIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCL 244
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 123 KEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV---DLSHNQLVNIPIRGF 179
K L T PS+QRL+L+ +K VD + + L ++ DLS+N + NI
Sbjct: 468 KYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELL 527
Query: 180 EPQEKLVELQLNHNKLSSVNNKT-------FI-GLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+ EKL L L HN L+ + F+ GL L +LNL N +++P F L
Sbjct: 528 KGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLR 587
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
L+ +DLG N ++ + Q+ F+ +L+ L L N + SV F
Sbjct: 588 ELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVF 631
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/187 (28%), Positives = 87/187 (46%)
Query: 137 SIQRLVLKYNR-IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG--FEPQEKLVELQLNHN 193
+I + L YN+ ++ ++ SLQ + L L N+ F P LV L L++N
Sbjct: 458 NIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNN 517
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDL--------PDRLFAPLSHLEELDLGQNRISR 245
++++N++ GL+ L++L+L+ N L L P + L HL L+LG N
Sbjct: 518 NIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDE 577
Query: 246 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR- 304
I F+ L L+ + L N L +P F L L + N+ T++ F R
Sbjct: 578 IPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRN 637
Query: 305 LSALDLR 311
LS LD+R
Sbjct: 638 LSYLDMR 644
Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 59/199 (29%), Positives = 95/199 (47%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFY--SSLQHVDLSHN------QLVNIP-IRGFEPQE-KL 185
P ++ L L+YN I+ + S FY S+L+ +DL + L ++P I F Q K
Sbjct: 299 PHLEYLSLEYNNIEHLSSR-SFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKC 357
Query: 186 VE-LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSH--LEELDLGQ 240
+E L ++ N + TF GL LK L+L +F L L + F L+ L L+L +
Sbjct: 358 LEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLNLTK 417
Query: 241 NRISRIDQACFEGLTALRILYLDDNQL-RSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 299
N+IS+I F L L +L L N++ + + + L + E+ + N + L +F
Sbjct: 418 NKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSF 477
Query: 300 NGLGRLSALDLRGAGLTNM 318
+ L L LR L N+
Sbjct: 478 TSVPSLQRLMLRRVALKNV 496
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 54/180 (30%), Positives = 84/180 (46%)
Query: 140 RLVLKYNRIKTVDSAIQFY-SSLQHVDLSHNQLVNIPIRGFE--PQEKLVELQLNHNKLS 196
+L L +N + + Q +LQ + LS+N++ ++ F+ L L+L+ N++
Sbjct: 152 KLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRLELSSNQIK 211
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLE-DLPDRLFAPLSH--LEELDLGQNRISRIDQACFEG 253
+ F L L L+L L L ++L LS+ +E L L N++ I F+G
Sbjct: 212 EFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDG 271
Query: 254 L--TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L T L L L N LR + SF +L L L + N L+ +F GL L LDLR
Sbjct: 272 LKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLR 331
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 49/147 (33%), Positives = 72/147 (48%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFE--PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRG 216
+S++++ LS NQL I F+ Q L L L+ N L + N +F L L+ L+L
Sbjct: 249 TSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEY 308
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQN----RIS-----RIDQACFEGLTALRILYLDDNQL 267
N +E L R F LS+L LDL ++ IS +ID F+ L L L +DDN
Sbjct: 309 NNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNF 368
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTL 294
+ +F L L L + N F++L
Sbjct: 369 PGIKRNTFTGLVRLKFLSLS-NSFSSL 394
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 55/197 (27%), Positives = 89/197 (45%)
Query: 132 ITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+ L S R + + +D + Q+ L+++++ N I F +L L L
Sbjct: 328 LDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSL 387
Query: 191 NHN--KLSSVNNKTFIGLKS--LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISR- 245
+++ L ++ N+TF+ L L +LNL N + + F+ L HLE LDLG N I +
Sbjct: 388 SNSFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQE 447
Query: 246 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL---RVGL-NVFTTLADGAFNG 301
+ + GL + +YL N+ + T SF + L L RV L NV + F
Sbjct: 448 LTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNV--DCSPSPFRP 505
Query: 302 LGRLSALDLRGAGLTNM 318
L L LDL + N+
Sbjct: 506 LPNLVILDLSNNNIANI 522
Score = 129 (50.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 53/203 (26%), Positives = 90/203 (44%)
Query: 126 NLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKL 185
+L+V+ + LN Q L + R +D+ ++ Y LS+N+ + + F L
Sbjct: 433 HLEVLDLGLNEIGQELTGQEWR--GLDNIVEIY-------LSYNKYLELTTNSFTSVPSL 483
Query: 186 VELQLNHNKLSSVN--NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
L L L +V+ F L +L +L+L N + ++ D L L LE LDL N +
Sbjct: 484 QRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNL 543
Query: 244 SRIDQAC--------FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 295
+R+ + +GL L IL L N +P +F L L + +G+N L
Sbjct: 544 ARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILP 603
Query: 296 DGAFNGLGRLSALDLRGAGLTNM 318
F+ L +L L+ +T++
Sbjct: 604 QSVFDNQVSLKSLSLQKNLITSV 626
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 62/216 (28%), Positives = 98/216 (45%)
Query: 113 CNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQL 171
C V C L IP L +I L L +N+++ + A YS L +D N +
Sbjct: 29 CTVRHEVADCSHLKLTQIPDDLPTNITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSI 88
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+ + L L L HN++S +++KTFI +L L+L N ++ + + F L
Sbjct: 89 SKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLK 148
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG--MLAELRVGLN 289
+L +LDL N +S L L+ L L +N++ S+ F +LG L L + N
Sbjct: 149 NLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSN 208
Query: 290 VFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMAL 325
+ G F+ LG LS L L A L+ + + L
Sbjct: 209 QIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCL 244
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 123 KEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV---DLSHNQLVNIPIRGF 179
K L T PS+QRL+L+ +K VD + + L ++ DLS+N + NI
Sbjct: 468 KYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELL 527
Query: 180 EPQEKLVELQLNHNKLSSVNNKT-------FI-GLKSLKVLNLRGNFLEDLPDRLFAPLS 231
+ EKL L L HN L+ + F+ GL L +LNL N +++P F L
Sbjct: 528 KGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLR 587
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
L+ +DLG N ++ + Q+ F+ +L+ L L N + SV F
Sbjct: 588 ELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVF 631
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 60/199 (30%), Positives = 95/199 (47%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFY--SSLQHVDLSHN------QLVNIP-IRGFEPQE-KL 185
P ++ L L+YN I+ + S FY S+L+ +DL + L ++P I F Q K
Sbjct: 299 PHLEYLSLEYNNIEHLSSR-SFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKC 357
Query: 186 VE-LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF--LEDLPDRLFAPLSH--LEELDLGQ 240
+E L ++ N + TF GL LK L+L +F L L + F L+ L LDL +
Sbjct: 358 LEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLDLTK 417
Query: 241 NRISRIDQACFEGLTALRILYLDDNQL-RSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 299
N+IS+I F L L +L L N++ + + + L + E+ + N + L +F
Sbjct: 418 NKISKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSF 477
Query: 300 NGLGRLSALDLRGAGLTNM 318
+ L L LR L N+
Sbjct: 478 TSVPSLQRLMLRRVALKNV 496
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/187 (28%), Positives = 87/187 (46%)
Query: 137 SIQRLVLKYNR-IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRG--FEPQEKLVELQLNHN 193
+I + L YN+ ++ ++ SLQ + L L N+ F P LV L L++N
Sbjct: 458 NIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNN 517
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDL--------PDRLFAPLSHLEELDLGQNRISR 245
++++N++ GL+ L++L+L+ N L L P + L HL L+LG N
Sbjct: 518 NIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDE 577
Query: 246 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR- 304
I F+ L L+ + L N L +P F L L + N+ T++ F R
Sbjct: 578 IPVEAFKDLRELKSIDLGMNNLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRN 637
Query: 305 LSALDLR 311
LS LD+R
Sbjct: 638 LSYLDMR 644
Score = 148 (57.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 54/180 (30%), Positives = 84/180 (46%)
Query: 140 RLVLKYNRIKTVDSAIQFY-SSLQHVDLSHNQLVNIPIRGFE--PQEKLVELQLNHNKLS 196
+L L +N + + Q +LQ + LS+N++ ++ F+ L L+L+ N++
Sbjct: 152 KLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRLELSSNQIK 211
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLE-DLPDRLFAPLSH--LEELDLGQNRISRIDQACFEG 253
+ F L L L+L L L ++L LS+ +E L L N++ I F+G
Sbjct: 212 EFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDG 271
Query: 254 L--TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L T L L L N LR + SF +L L L + N L+ +F GL L LDLR
Sbjct: 272 LKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLR 331
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 49/147 (33%), Positives = 72/147 (48%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFE--PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRG 216
+S++++ LS NQL I F+ Q L L L+ N L + N +F L L+ L+L
Sbjct: 249 TSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEY 308
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQN----RIS-----RIDQACFEGLTALRILYLDDNQL 267
N +E L R F LS+L LDL ++ IS +ID F+ L L L +DDN
Sbjct: 309 NNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNF 368
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTL 294
+ +F L L L + N F++L
Sbjct: 369 PGIKRNTFTGLVRLKFLSLS-NSFSSL 394
Score = 136 (52.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 54/197 (27%), Positives = 89/197 (45%)
Query: 132 ITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+ L S R + + +D + Q+ L+++++ N I F +L L L
Sbjct: 328 LDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSL 387
Query: 191 NHN--KLSSVNNKTFIGLKS--LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISR- 245
+++ L ++ N+TF+ L L +L+L N + + F+ L HLE LDLG N I +
Sbjct: 388 SNSFSSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGAFSWLGHLEVLDLGLNEIGQE 447
Query: 246 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL---RVGL-NVFTTLADGAFNG 301
+ + GL + +YL N+ + T SF + L L RV L NV + F
Sbjct: 448 LTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNV--DCSPSPFRP 505
Query: 302 LGRLSALDLRGAGLTNM 318
L L LDL + N+
Sbjct: 506 LPNLVILDLSNNNIANI 522
Score = 129 (50.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 53/203 (26%), Positives = 90/203 (44%)
Query: 126 NLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKL 185
+L+V+ + LN Q L + R +D+ ++ Y LS+N+ + + F L
Sbjct: 433 HLEVLDLGLNEIGQELTGQEWR--GLDNIVEIY-------LSYNKYLELTTNSFTSVPSL 483
Query: 186 VELQLNHNKLSSVN--NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
L L L +V+ F L +L +L+L N + ++ D L L LE LDL N +
Sbjct: 484 QRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQHNNL 543
Query: 244 SRIDQAC--------FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 295
+R+ + +GL L IL L N +P +F L L + +G+N L
Sbjct: 544 ARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLNILP 603
Query: 296 DGAFNGLGRLSALDLRGAGLTNM 318
F+ L +L L+ +T++
Sbjct: 604 QSVFDNQVSLKSLSLQKNLITSV 626
>UNIPROTKB|F1NRZ3 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:AADN02043142
IPI:IPI00581464 Ensembl:ENSGALT00000012536 Uniprot:F1NRZ3
Length = 483
Score = 190 (71.9 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 67/223 (30%), Positives = 106/223 (47%)
Query: 107 CPPDCDCNDET-LVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD 165
CP C C E + ++C++ L IP + QR+ L N+I V S ++S +++
Sbjct: 27 CPGACVCYSEPKITISCQQQGLTAIPTEIPIQSQRIFLHNNKITLVRSTS--FTSCRNMT 84
Query: 166 LS--HNQLVNIPIRG-FEPQEKLVELQLNHN-KLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ H+ +++ G F KL EL L+ N L S+N TF GL L L+L L +
Sbjct: 85 ILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPVTFRGLVHLHTLHLDRCGLME 144
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L LF L L+ L L N + + F L L L+L N+++S+ F L L
Sbjct: 145 LSTGLFRGLFSLQYLYLQDNNLQNLLDDTFIDLANLTYLFLHGNKIKSLSENVFRGLINL 204
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L + N + + +F+ LG++ L L LT + G +MA
Sbjct: 205 DRLLLHQNRVSLVHRRSFHDLGKVMTLYLFNNNLTVLTGETMA 247
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 56/171 (32%), Positives = 79/171 (46%)
Query: 146 NRIKTVDSAIQFY--SSLQHVDLSHN-QLVNI-PIRGFEPQEKLVELQLNHNKLSSVNNK 201
N I ++ FY + L+ +DLS N L +I P+ F L L L+ L ++
Sbjct: 91 NNISLIEPGA-FYGLNKLEELDLSDNTNLKSINPVT-FRGLVHLHTLHLDRCGLMELSTG 148
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
F GL SL+ L L+ N L++L D F L++L L L N+I + + F GL L L
Sbjct: 149 LFRGLFSLQYLYLQDNNLQNLLDDTFIDLANLTYLFLHGNKIKSLSENVFRGLINLDRLL 208
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
L N++ V SF LG + L + N T L L L L L G
Sbjct: 209 LHQNRVSLVHRRSFHDLGKVMTLYLFNNNLTVLTGETMAPLVSLQYLRLNG 259
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 47/160 (29%), Positives = 75/160 (46%)
Query: 134 LNPSIQRLVLKYN-RIKTVDSAIQFYSSLQHVDLSHNQ---LVNIPIRGFEPQEKLVELQ 189
LN ++ L L N +K+++ + L H+ H L+ + F L L
Sbjct: 104 LN-KLEELDLSDNTNLKSINPVT--FRGLVHLHTLHLDRCGLMELSTGLFRGLFSLQYLY 160
Query: 190 LNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQA 249
L N L ++ + TFI L +L L L GN ++ L + +F L +L+ L L QNR+S + +
Sbjct: 161 LQDNNLQNLLDDTFIDLANLTYLFLHGNKIKSLSENVFRGLINLDRLLLHQNRVSLVHRR 220
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
F L + LYL +N L + + L L LR+ N
Sbjct: 221 SFHDLGKVMTLYLFNNNLTVLTGETMAPLVSLQYLRLNGN 260
>FB|FBgn0039354 [details] [associations]
symbol:Lgr3 "Lgr3" species:7227 "Drosophila melanogaster"
[GO:0016021 "integral to membrane" evidence=IEA;ISS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA;ISS]
[GO:0016500 "protein-hormone receptor activity" evidence=ISS]
[GO:0008188 "neuropeptide receptor activity" evidence=ISS]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA;NAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0016500
GO:GO:0008188 HSSP:Q07954 OrthoDB:EOG451C6B EMBL:BT003503
ProteinModelPortal:Q86P34 SMR:Q86P34 PRIDE:Q86P34
FlyBase:FBgn0039354 eggNOG:NOG274887 InParanoid:Q86P34
ArrayExpress:Q86P34 Bgee:Q86P34 Uniprot:Q86P34
Length = 765
Score = 193 (73.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 57/215 (26%), Positives = 98/215 (45%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLS 167
P C C T++ + A L P L+ + L++ N + D+ ++ LQ + L
Sbjct: 129 PKACQCGQGTILYCGRYAKLRRFP-RLSSEVTNLIIIRNNLTLRDNIFANFTRLQKLTLK 187
Query: 168 HNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLF 227
+N + +P+ F L L+L+HN +S + + F+GL SL+ L L N L LP
Sbjct: 188 YNNISRVPLGSFSGLFHLEHLELSHNNVSHLPHGVFLGLHSLQWLFLVNNHLHHLPVEQL 247
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
LE L L +NR++ + + L +YLD N++ + +F L L L +
Sbjct: 248 RFFRRLEWLVLSRNRLT-LRNVQLPKIPTLYEVYLDFNRIEYIGEETFSQLDNLHLLDLQ 306
Query: 288 LNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHS 322
N+ T + AF L + + L G + + G +
Sbjct: 307 HNLITHIHGRAFANLTNMRDIRLVGNPIKELSGET 341
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 51/174 (29%), Positives = 78/174 (44%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+Q+L LKYN I V + L+H++LSHN + ++P F L L L +N L
Sbjct: 181 LQKLTLKYNNISRVPLGSFSGLFHLEHLELSHNNVSHLPHGVFLGLHSLQWLFLVNNHLH 240
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
+ + + L+ L L N L L + + L E+ L NRI I + F L
Sbjct: 241 HLPVEQLRFFRRLEWLVLSRNRLT-LRNVQLPKIPTLYEVYLDFNRIEYIGEETFSQLDN 299
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +L L N + + +F L + ++R+ N L+ F RL AL L
Sbjct: 300 LHLLDLQHNLITHIHGRAFANLTNMRDIRLVGNPIKELSGETFLHNTRLEALSL 353
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 120 VTCKEANLDVIPITLNPSI---QRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIP 175
+T K N+ +P+ + + L L +N + + + SLQ + L +N L ++P
Sbjct: 184 LTLKYNNISRVPLGSFSGLFHLEHLELSHNNVSHLPHGVFLGLHSLQWLFLVNNHLHHLP 243
Query: 176 IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEE 235
+ +L L L+ N+L+ + N + +L + L N +E + + F+ L +L
Sbjct: 244 VEQLRFFRRLEWLVLSRNRLT-LRNVQLPKIPTLYEVYLDFNRIEYIGEETFSQLDNLHL 302
Query: 236 LDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 288
LDL N I+ I F LT +R + L N ++ + +F++ L L + L
Sbjct: 303 LDLQHNLITHIHGRAFANLTNMRDIRLVGNPIKELSGETFLHNTRLEALSLAL 355
>UNIPROTKB|Q9NZU0 [details] [associations]
symbol:FLRT3 "Leucine-rich repeat transmembrane protein
FLRT3" species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0030674 "protein binding, bridging" evidence=NAS]
[GO:0005578 "proteinaceous extracellular matrix" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005057 "receptor
signaling protein activity" evidence=NAS] InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0005887 GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0030674 EMBL:CH471133 GO:GO:0005057 InterPro:IPR000372
SMART:SM00013 HOVERGEN:HBG051629 KO:K16362 EMBL:AF169677
EMBL:AB040902 EMBL:AK027297 EMBL:AK027670 EMBL:AK027694
EMBL:AY358319 EMBL:AK074909 EMBL:AL132826 EMBL:BC020870
IPI:IPI00002320 RefSeq:NP_037413.1 RefSeq:NP_938205.1
UniGene:Hs.41296 ProteinModelPortal:Q9NZU0 SMR:Q9NZU0 STRING:Q9NZU0
PhosphoSite:Q9NZU0 DMDM:20138400 PaxDb:Q9NZU0 PeptideAtlas:Q9NZU0
PRIDE:Q9NZU0 DNASU:23767 Ensembl:ENST00000341420
Ensembl:ENST00000378053 GeneID:23767 KEGG:hsa:23767 UCSC:uc002wov.2
CTD:23767 GeneCards:GC20M014251 HGNC:HGNC:3762 HPA:CAB026166
MIM:604808 neXtProt:NX_Q9NZU0 PharmGKB:PA28179 InParanoid:Q9NZU0
OMA:SPYRVCM OrthoDB:EOG4NCMCB GenomeRNAi:23767 NextBio:46731
ArrayExpress:Q9NZU0 Bgee:Q9NZU0 CleanEx:HS_FLRT3
Genevestigator:Q9NZU0 GermOnline:ENSG00000125848 Uniprot:Q9NZU0
Length = 649
Score = 192 (72.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 63/181 (34%), Positives = 96/181 (53%)
Query: 136 PSIQRLVLKYNRIKTV---DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
P ++ L L N + V + A + + L+ + LS N L IP G P+ + EL+L+
Sbjct: 128 PYLEELHLDDNSVSAVSIEEGAFRDSNYLRLLFLSRNHLSTIPW-GL-PRT-IEELRLDD 184
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLED--LPDRLFAPLSHLEELDLGQNRISRIDQAC 250
N++S++++ + GL SLK L L GN L + L D++F L +L EL L +N ++
Sbjct: 185 NRISTISSPSLQGLTSLKRLVLDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLTAAP-VN 243
Query: 251 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
G T LR LYL DN + VP +F YL L L + N + L G F+ L ++ L L
Sbjct: 244 LPG-TNLRKLYLQDNHINRVPPNAFSYLRQLYRLDMSNNNLSNLPQGIFDDLDNITQLIL 302
Query: 311 R 311
R
Sbjct: 303 R 303
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 55/216 (25%), Positives = 92/216 (42%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKT--VDSAIQFYSSLQHV 164
CP C C + + C + L IP + L L+ N+I + S ++ ++ +
Sbjct: 31 CPSVCRC--DAGFIYCNDRFLTSIPTGIPEDATTLYLQNNQINNAGIPSDLKNLLKVERI 88
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE--DL 222
L HN L P P+ + EL L N + ++ + + L+ L+L N + +
Sbjct: 89 YLYHNSLDEFPTN--LPKY-VKELHLQENNIRTITYDSLSKIPYLEELHLDDNSVSAVSI 145
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F ++L L L +N +S I + LR LDDN++ ++ +PS L L
Sbjct: 146 EEGAFRDSNYLRLLFLSRNHLSTIPWGLPRTIEELR---LDDNRISTISSPSLQGLTSLK 202
Query: 283 ELRVGLNVFTT--LADGAFNGLGRLSALDLRGAGLT 316
L + N+ L D F L L+ L L LT
Sbjct: 203 RLVLDGNLLNNHGLGDKVFFNLVNLTELSLVRNSLT 238
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 45/143 (31%), Positives = 70/143 (48%)
Query: 126 NLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPI--RGFEPQ 182
+L IP L +I+ L L NRI T+ S ++Q +SL+ + L N L N + + F
Sbjct: 165 HLSTIPWGLPRTIEELRLDDNRISTISSPSLQGLTSLKRLVLDGNLLNNHGLGDKVFFNL 224
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
L EL L N L++ G +L+ L L+ N + +P F+ L L LD+ N
Sbjct: 225 VNLTELSLVRNSLTAAP-VNLPGT-NLRKLYLQDNHINRVPPNAFSYLRQLYRLDMSNNN 282
Query: 243 ISRIDQACFEGLTALRILYLDDN 265
+S + Q F+ L + L L +N
Sbjct: 283 LSNLPQGIFDDLDNITQLILRNN 305
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 44/155 (28%), Positives = 71/155 (45%)
Query: 166 LSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
L +NQ+ N I + K+ + L HN L K +K L+L+ N + +
Sbjct: 65 LQNNQINNAGIPSDLKNLLKVERIYLYHNSLDEFPTNL---PKYVKELHLQENNIRTITY 121
Query: 225 RLFAPLSHLEELDLGQNRISR--IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ + +LEEL L N +S I++ F LR+L+L N L ++P + +
Sbjct: 122 DSLSKIPYLEELHLDDNSVSAVSIEEGAFRDSNYLRLLFLSRNHLSTIP---WGLPRTIE 178
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 317
ELR+ N +T++ + GL L L L G L N
Sbjct: 179 ELRLDDNRISTISSPSLQGLTSLKRLVLDGNLLNN 213
>FB|FBgn0032484 [details] [associations]
symbol:kek4 "kekkon4" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:P13596 FlyBase:FBgn0032484
EMBL:AF507920 RefSeq:NP_609615.2 UniGene:Dm.417 SMR:Q9VK22
EnsemblMetazoa:FBtr0080485 GeneID:34718 KEGG:dme:Dmel_CG9431
UCSC:CG9431-RA CTD:34718 InParanoid:Q9VK22 OMA:PRIPEDI
GenomeRNAi:34718 NextBio:789865 Uniprot:Q9VK22
Length = 649
Score = 192 (72.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 54/192 (28%), Positives = 92/192 (47%)
Query: 110 DCDC--NDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD-- 165
+C C N C+ +L +P L+P +Q L L +N I ++ + LQ++
Sbjct: 44 NCHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDLSHNHIFYLEENAFLTTHLQNLQKL 103
Query: 166 -LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+ + L + R F + L+EL L++N L + F L ++ + L GN L+ L
Sbjct: 104 LIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAIFLNGNLLQALRH 163
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 284
+F L +L +++L +NR+ ID F G+ L +YLD+N+L + SF L L L
Sbjct: 164 GVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKLRVESFQDLTKLTAL 223
Query: 285 RVGLNVFTTLAD 296
+ N + D
Sbjct: 224 SLVENPWNCTCD 235
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/162 (28%), Positives = 79/162 (48%)
Query: 153 SAIQFYSS--LQHVDLSHNQLVNIPIRGFEPQ--EKLVELQLNHNKLSSVNNKTFIGLKS 208
S + Y S +Q +DLSHN + + F + L +L + + L +N ++F L+
Sbjct: 64 SGVPEYLSPEVQVLDLSHNHIFYLEENAFLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQI 123
Query: 209 LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLR 268
L L+L N L DL +F LS + + L N + + F L L + L N+L
Sbjct: 124 LIELDLSNNLLVDLLPNVFDCLSKVRAIFLNGNLLQALRHGVFRNLKYLHKIELKRNRLV 183
Query: 269 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
S+ +F+ + +L+++ + N T L +F L +L+AL L
Sbjct: 184 SIDAKAFVGVPLLSQIYLDNNELTKLRVESFQDLTKLTALSL 225
Score = 116 (45.9 bits), Expect = 0.00090, P = 0.00090
Identities = 43/162 (26%), Positives = 77/162 (47%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIG--LKSLKVLNLRG 216
S + D + L +P P+ ++ L L+HN + + F+ L++L+ L +R
Sbjct: 51 SGKKTADCRNLSLSGVP-EYLSPEVQV--LDLSHNHIFYLEENAFLTTHLQNLQKLLIRN 107
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 276
L+ L R F L L ELDL N + + F+ L+ +R ++L+ N L+++ F
Sbjct: 108 GTLKYLNQRSFTQLQILIELDLSNNLLVDLLPNVFDCLSKVRAIFLNGNLLQALRHGVFR 167
Query: 277 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L ++ + N ++ AF G+ LS + L LT +
Sbjct: 168 NLKYLHKIELKRNRLVSIDAKAFVGVPLLSQIYLDNNELTKL 209
>UNIPROTKB|B4DHD1 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
EMBL:AC107219 UniGene:Hs.591686 HGNC:HGNC:19718 HOVERGEN:HBG026354
HOGENOM:HOG000049056 EMBL:AC019341 EMBL:AC107056 EMBL:AC108017
EMBL:AC121161 EMBL:AC125489 EMBL:AK295040 IPI:IPI00910652
SMR:B4DHD1 STRING:B4DHD1 Ensembl:ENST00000448688 UCSC:uc010iql.3
Uniprot:B4DHD1
Length = 652
Score = 192 (72.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 56/183 (30%), Positives = 96/183 (52%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+Q+L L+ N+I ++ A + +SL + LSHN++ + FE +L L + N LS
Sbjct: 71 LQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLS 130
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDR-LFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ TF GL SL +L L N L LPD+ L + L L + +N+I+ +++ F L
Sbjct: 131 RISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLVMRKNKINHLNENTFAPLQ 190
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L N++ ++P F L L++L + N + F+ L +L +L L G +
Sbjct: 191 KLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGIEI 250
Query: 316 TNM 318
+N+
Sbjct: 251 SNI 253
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 56/205 (27%), Positives = 98/205 (47%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDL 166
P C C + L + C E NL +P +++ ++ + L++N I+ + + Y LQ + L
Sbjct: 20 PVQCLC--QGLELDCDETNLRAVP-SVSSNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYL 76
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
+N++ +I I F L +L L+HN+++ + F L L+ L + N L +
Sbjct: 77 QNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPT 136
Query: 227 FAPLSHLEELDLGQNRISRI-DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L+ L L L N ++R+ D+ + + L L + N++ + +F L L EL
Sbjct: 137 FYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLVMRKNKINHLNENTFAPLQKLDELD 196
Query: 286 VGLNVFTTLADGAFNGLGRLSALDL 310
+G N L F L LS L+L
Sbjct: 197 LGSNKIENLPPLIFKDLKELSQLNL 221
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 61/207 (29%), Positives = 93/207 (44%)
Query: 108 PPDCDCNDETLVVTCKEAN-LDVIPIT----LNPSIQRLVLKYNRIKTVDSAI-QFYSSL 161
PPDC N L + N + I I LN S+ +L L +NRI + + + L
Sbjct: 61 PPDCFKNYHDLQKLYLQNNKITSISIYAFRGLN-SLTKLYLSHNRITFLKPGVFEDLHRL 119
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIG-LKSLKVLNLRGNFLE 220
+ + + N L I F L+ L L +N L+ + +K + L L +R N +
Sbjct: 120 EWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLVMRKNKIN 179
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
L + FAPL L+ELDLG N+I + F+ L L L L N ++ + F YL
Sbjct: 180 HLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVK 239
Query: 281 LAELRV-GLNVFTTLADGAFNGLGRLS 306
L L + G+ + + + F L LS
Sbjct: 240 LKSLSLEGIEI-SNIQQRMFRPLMNLS 265
Score = 153 (58.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 50/161 (31%), Positives = 77/161 (47%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S++ + L N + +P F+ L +L L +NK++S++ F GL SL L L N
Sbjct: 45 SNVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNR 104
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT-PSFIY 277
+ L +F L LE L + N +SRI F GL +L +L L +N L +P P +
Sbjct: 105 ITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQH 164
Query: 278 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ L L + N L + F L +L LDL + N+
Sbjct: 165 MPRLHWLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENL 205
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 28/102 (27%), Positives = 54/102 (52%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + LV++ N+I + ++ L +DL N++ N+P F+ ++L +L L++N
Sbjct: 166 PRLHWLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNP 225
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEEL 236
+ + F L LK L+L G + ++ R+F PL +L +
Sbjct: 226 IQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 267
>UNIPROTKB|A1KZ92 [details] [associations]
symbol:PXDNL "Peroxidasin-like protein" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004601 "peroxidase activity"
evidence=ISS] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
GO:GO:0005737 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0090305 GO:GO:0004601 GO:GO:0004519 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0042744
SUPFAM:SSF48113 PROSITE:PS00435 EMBL:CH471068 MEROPS:I43.001
Gene3D:1.10.640.10 eggNOG:NOG262194 HOGENOM:HOG000016084
EMBL:AC090186 EMBL:EU170240 EMBL:AY877349 EMBL:AC103958
EMBL:AC107374 EMBL:AC011128 EMBL:AC012413 EMBL:AK058200
EMBL:AK131524 IPI:IPI00065049 IPI:IPI00890814 RefSeq:NP_653252.3
UniGene:Hs.444882 ProteinModelPortal:A1KZ92 SMR:A1KZ92
PeroxiBase:5398 PeroxiBase:5827 PhosphoSite:A1KZ92 PRIDE:A1KZ92
Ensembl:ENST00000356297 Ensembl:ENST00000543296 GeneID:137902
KEGG:hsa:137902 UCSC:uc003xqu.4 CTD:137902 GeneCards:GC08M052232
HGNC:HGNC:26359 HPA:HPA007919 neXtProt:NX_A1KZ92
PharmGKB:PA142671110 HOVERGEN:HBG108312 OMA:EFRYNDL
OrthoDB:EOG4HDSSN GenomeRNAi:137902 NextBio:83705 Bgee:A1KZ92
CleanEx:HS_PXDNL Genevestigator:A1KZ92 Uniprot:A1KZ92
Length = 1463
Score = 196 (74.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/178 (34%), Positives = 89/178 (50%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVD 165
CP C C T V C LD IP + L L++NRI+ + SA + +L +
Sbjct: 24 CPSRCLCFKST--VRCMHLMLDHIP-QVPQQTTVLDLRFNRIREIPGSAFKKLKNLNTLL 80
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L++N + I FE E L+ L L N++ +++ +TF GL SL+ L + N LE L
Sbjct: 81 LNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQTFKGLISLEHLYIHFNQLEMLQPE 140
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L LE L L N++S+I F L +L+ L LD N L V ++LG L +
Sbjct: 141 TFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLRLDSNAL--VCDCDLMWLGELLQ 196
Score = 150 (57.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 41/133 (30%), Positives = 63/133 (47%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+DL N++ IP F+ + L L LN+N + ++ F GL++L L L N + L
Sbjct: 55 LDLRFNRIREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALD 114
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L LE L + N++ + F L L L+L +N+L +P SF L L
Sbjct: 115 KQTFKGLISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKR 174
Query: 284 LRVGLNVFTTLAD 296
LR+ N D
Sbjct: 175 LRLDSNALVCDCD 187
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 41/130 (31%), Positives = 62/130 (47%)
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
PQ+ V L L N++ + F LK+L L L N + + F L +L L L +
Sbjct: 49 PQQTTV-LDLRFNRIREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYK 107
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
N I +D+ F+GL +L LY+ NQL + +F L L L + N + + G+F+
Sbjct: 108 NEIHALDKQTFKGLISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFS 167
Query: 301 GLGRLSALDL 310
L L L L
Sbjct: 168 NLDSLKRLRL 177
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 39/119 (32%), Positives = 55/119 (46%)
Query: 211 VLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSV 270
VL+LR N + ++P F L +L L L N I +I + FEGL L LYL N++ ++
Sbjct: 54 VLDLRFNRIREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHAL 113
Query: 271 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
+F L L L + N L F L RL L L L+ + S + D L
Sbjct: 114 DKQTFKGLISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSL 172
>UNIPROTKB|P51884 [details] [associations]
symbol:LUM "Lumican" species:9606 "Homo sapiens"
[GO:0007601 "visual perception" evidence=IEA] [GO:0014070 "response
to organic cyclic compound" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=NAS]
[GO:0005583 "fibrillar collagen" evidence=IDA] [GO:0005518
"collagen binding" evidence=IDA] [GO:0005576 "extracellular region"
evidence=NAS;TAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=NAS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0018146 "keratan sulfate biosynthetic process" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0042339 "keratan sulfate metabolic process" evidence=TAS]
[GO:0042340 "keratan sulfate catabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005615
"extracellular space" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] Reactome:REACT_111217 InterPro:IPR001611
InterPro:IPR027219 PROSITE:PS51450 Reactome:REACT_116125
GO:GO:0005615 GO:GO:0005975 GO:GO:0007601 GO:GO:0030199
GO:GO:0045944 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
EMBL:CH471054 GO:GO:0014070 GO:GO:0005518 GO:GO:0051216
GO:GO:0043202 GO:GO:0005796 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0070848 GO:GO:0018146 GO:GO:0042340
GO:GO:0005201 GO:GO:0005583 HOGENOM:HOG000234447 HOVERGEN:HBG108061
CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:U18728 EMBL:U21128 EMBL:BT006707
EMBL:AK312682 EMBL:BC007038 EMBL:BC035997 IPI:IPI00020986
RefSeq:NP_002336.1 UniGene:Hs.406475 ProteinModelPortal:P51884
SMR:P51884 IntAct:P51884 MINT:MINT-1422554 STRING:P51884
PhosphoSite:P51884 DMDM:20141464 PaxDb:P51884 PeptideAtlas:P51884
PRIDE:P51884 DNASU:4060 Ensembl:ENST00000266718 GeneID:4060
KEGG:hsa:4060 UCSC:uc001tbm.3 GeneCards:GC12M091430 HGNC:HGNC:6724
HPA:CAB022193 HPA:HPA001522 MIM:600616 neXtProt:NX_P51884
PharmGKB:PA30486 InParanoid:P51884 PhylomeDB:P51884 ChiTaRS:LUM
GenomeRNAi:4060 NextBio:15912 PMAP-CutDB:P51884 Bgee:P51884
CleanEx:HS_LUM Genevestigator:P51884 GermOnline:ENSG00000139329
Uniprot:P51884
Length = 338
Score = 186 (70.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 72/225 (32%), Positives = 111/225 (49%)
Query: 102 QASAFCPPDCDCNDE-TLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYS 159
Q+S C P+C+C + + C E L +P+ + P I+ L L+ N+I +D A + +
Sbjct: 32 QSSPNCAPECNCPESYPSAMYCDELKLKSVPM-VPPGIKYLYLRNNQIDHIDEKAFENVT 90
Query: 160 SLQHVDLSHNQLVNIPIRG--FEPQEKLVELQLNHNKLS-SVNNKTFIGLKSLKVLNLRG 216
LQ + L HN L N I+G F ++L +L +NHN L+ SV KSL+ L L
Sbjct: 91 DLQWLILDHNLLENSKIKGRVFSKLKQLKKLHINHNNLTESVGPLP----KSLEDLQLTH 146
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQNRISR-IDQACFEGLTALRILYLDDNQLRSVPTPSF 275
N + L F L +L + L NR+ A F+GL +L L L NQ+ +P S
Sbjct: 147 NKITKLGS--FEGLVNLTFIHLQHNRLKEDAVSAAFKGLKSLEYLDLSFNQIARLP--SG 202
Query: 276 IYLGMLAELRVGLNVFTTLADG---AFNGLG--RLSALDLRGAGL 315
+ + +L L + N + + D FN L RLS +L +G+
Sbjct: 203 LPVSLLT-LYLDNNKISNIPDEYFKRFNALQYLRLSHNELADSGI 246
Score = 158 (60.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 59/188 (31%), Positives = 94/188 (50%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYSSLQHVD---LSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
+Q L+L +N ++ + +S L+ + ++HN L G P+ L +LQL HNK
Sbjct: 92 LQWLILDHNLLENSKIKGRVFSKLKQLKKLHINHNNLTESV--GPLPKS-LEDLQLTHNK 148
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFL-EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
++ + + F GL +L ++L+ N L ED F L LE LDL N+I+R+ G
Sbjct: 149 ITKLGS--FEGLVNLTFIHLQHNRLKEDAVSAAFKGLKSLEYLDLSFNQIARLPS----G 202
Query: 254 L-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT--LADGAFNGLGRLSALDL 310
L +L LYLD+N++ ++P F L LR+ N + +FN + L LDL
Sbjct: 203 LPVSLLTLYLDNNKISNIPDEYFKRFNALQYLRLSHNELADSGIPGNSFN-VSSLVELDL 261
Query: 311 RGAGLTNM 318
L N+
Sbjct: 262 SYNKLKNI 269
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 51/149 (34%), Positives = 79/149 (53%)
Query: 143 LKYNRIK--TVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNN 200
L++NR+K V +A + SL+++DLS NQ+ +P G P L+ L L++NK+S++ +
Sbjct: 166 LQHNRLKEDAVSAAFKGLKSLEYLDLSFNQIARLP-SGL-PVS-LLTLYLDNNKISNIPD 222
Query: 201 KTFIGLKSLKVLNLRGNFLED--LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
+ F +L+ L L N L D +P F +S L ELDL N++ I E L
Sbjct: 223 EYFKRFNALQYLRLSHNELADSGIPGNSFN-VSSLVELDLSYNKLKNIPTVN-ENLENY- 279
Query: 259 ILYLDDNQLRSVPTPSFI-YLGMLAELRV 286
YL+ NQL SF LG L+ ++
Sbjct: 280 --YLEVNQLEKFDIKSFCKILGPLSYSKI 306
>RGD|727812 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=IEA;ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA;ISO;ISS;IDA] InterPro:IPR001611
PROSITE:PS51450 RGD:727812 GO:GO:0016021 GO:GO:0009897
InterPro:IPR003591 SMART:SM00369 GO:GO:0004872 GO:GO:0045121
GO:GO:0007166 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OrthoDB:EOG4FXR7G eggNOG:NOG254142
EMBL:AF532861 EMBL:AY311478 EMBL:BC129084 IPI:IPI00327090
IPI:IPI00734618 RefSeq:NP_852042.1 UniGene:Rn.22361
ProteinModelPortal:Q80WD0 Ensembl:ENSRNOT00000067414 GeneID:303311
KEGG:rno:303311 InParanoid:Q80WD0 NextBio:651118
ArrayExpress:Q80WD0 Genevestigator:Q80WD0
GermOnline:ENSRNOG00000003121 Uniprot:Q80WD0
Length = 445
Score = 189 (71.6 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 67/222 (30%), Positives = 96/222 (43%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQH 163
S CP DC C + V+C+ N IP + +R+ L+ N I + F ++
Sbjct: 22 SGGCPRDCVCYPSPMTVSCQAHNFAAIPEGIPEDSERIFLQNNHITFLQQG-HFSPAMVT 80
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+ + N + I FE L EL L N+ L ++ +TF GL L L L L L
Sbjct: 81 LWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYKCGLSSL 140
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
P +F L L+ L L N I + F L L L+L N+L S+ F L L
Sbjct: 141 PAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVNLD 200
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L + N + AF+ L RL+ L L LT + G +A
Sbjct: 201 RLLLHENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLA 242
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 58/180 (32%), Positives = 83/180 (46%)
Query: 135 NPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHN-QLVNIPIRGFEPQEKLVELQLNH 192
+P++ L + N I + + + + L+ +DL N QL + F+ KL L L
Sbjct: 75 SPAMVTLWIYSNNITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYK 134
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
LSS+ F GL SL+ L L+ N +E L D +F L +L L L N++ + Q F
Sbjct: 135 CGLSSLPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFR 194
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
GL L L L +NQL+ V +F L L L + N T L L L L L G
Sbjct: 195 GLVNLDRLLLHENQLQWVHHKAFHDLHRLTTLFLFNNSLTELQGDCLAPLVALEFLRLNG 254
>UNIPROTKB|P02750 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein"
species:9606 "Homo sapiens" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0016020 "membrane" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005615 "extracellular space" evidence=IDA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
GO:GO:0016020 EMBL:AF403428 EMBL:BC034389 EMBL:BC070198
IPI:IPI00022417 PIR:A03211 RefSeq:NP_443204.1 UniGene:Hs.655559
ProteinModelPortal:P02750 SMR:P02750 STRING:P02750
PhosphoSite:P02750 DMDM:23503037 DOSAC-COBS-2DPAGE:P02750
SWISS-2DPAGE:P02750 PaxDb:P02750 PeptideAtlas:P02750 PRIDE:P02750
DNASU:116844 Ensembl:ENST00000306390 GeneID:116844 KEGG:hsa:116844
UCSC:uc002mau.3 CTD:116844 GeneCards:GC19M004538 HGNC:HGNC:29480
HPA:HPA001888 HPA:HPA001889 MIM:611289 neXtProt:NX_P02750
PharmGKB:PA134919634 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 InParanoid:P02750 OMA:RCAGPEA OrthoDB:EOG4TMR2P
PhylomeDB:P02750 GenomeRNAi:116844 NextBio:80020
ArrayExpress:P02750 Bgee:P02750 CleanEx:HS_LRG1
Genevestigator:P02750 GermOnline:ENSG00000171236 GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
Uniprot:P02750
Length = 347
Score = 186 (70.5 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 64/226 (28%), Positives = 103/226 (45%)
Query: 101 HQASAFCPPDCDCND----ETLVVTCKEANLDVIPITL---NPSIQRLVLKYNRIKTVDS 153
H +S C P + +T+ + + NL +P L +Q L L N ++++
Sbjct: 50 HGSSISCQPPAEIPGYLPADTVHLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESLSP 109
Query: 154 A-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVL 212
++ L+ +DL+ N L +P F+ L L L N+L + GLK+L L
Sbjct: 110 EFLRPVPQLRVLDLTRNALTGLPPGLFQASATLDTLVLKENQLEVLEVSWLHGLKALGHL 169
Query: 213 NLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 272
+L GN L LP L A + L LDLG+N++ + G L L+L+ N+L+ +
Sbjct: 170 DLSGNRLRKLPPGLLANFTLLRTLDLGENQLETLPPDLLRGPLQLERLHLEGNKLQVLGK 229
Query: 273 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ L L + N +A GAF GL +L LDL L ++
Sbjct: 230 DLLLPQPDLRYLFLNGNKLARVAAGAFQGLRQLDMLDLSNNSLASV 275
Score = 160 (61.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 50/157 (31%), Positives = 81/157 (51%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVE-LQLNHNK 194
++ LVLK N+++ ++ S + +L H+DLS N+L +P G L+ L L N+
Sbjct: 141 TLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLP-PGLLANFTLLRTLDLGENQ 199
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L ++ G L+ L+L GN L+ L L P L L L N+++R+ F+GL
Sbjct: 200 LETLPPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGAFQGL 259
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLA-ELRVGLNV 290
L +L L +N L SVP + LG ++R G ++
Sbjct: 260 RQLDMLDLSNNSLASVPEGLWASLGQPNWDMRDGFDI 296
>UNIPROTKB|Q5VT99 [details] [associations]
symbol:LRRC38 "Leucine-rich repeat-containing protein 38"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471167
HSSP:Q9BZR6 EMBL:AL603749 EMBL:AL354712 EMBL:BC016048
IPI:IPI00059708 RefSeq:NP_001010847.1 UniGene:Hs.657356
ProteinModelPortal:Q5VT99 SMR:Q5VT99 DMDM:74756785 PRIDE:Q5VT99
Ensembl:ENST00000376085 GeneID:126755 KEGG:hsa:126755
UCSC:uc001avb.3 CTD:126755 GeneCards:GC01M013801 HGNC:HGNC:27005
HPA:HPA038778 neXtProt:NX_Q5VT99 eggNOG:KOG0619
HOGENOM:HOG000113369 HOVERGEN:HBG094920 OMA:LDEIQCS
OrthoDB:EOG4GMTXN ChiTaRS:LRRC38 GenomeRNAi:126755 NextBio:81900
Bgee:Q5VT99 CleanEx:HS_LRRC38 Genevestigator:Q5VT99 Uniprot:Q5VT99
Length = 294
Score = 183 (69.5 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 48/160 (30%), Positives = 75/160 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVD 165
CP C C D V C++ L +P +++L++ NRI+ + + FY L ++D
Sbjct: 28 CPAGCACTDPH-TVDCRDRGLPSVPDPFPLDVRKLLVAGNRIQRIPEDFFIFYGDLVYLD 86
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
+N L ++ F KLV L L++N L+ + F L L+L N L + +
Sbjct: 87 FRNNSLRSLEEGTFSGSAKLVFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNNLVGVHED 146
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L L+ L+L N + + A L ALR L LD N
Sbjct: 147 AFETLESLQVLELNDNNLRSLSVAALAALPALRSLRLDGN 186
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/121 (33%), Positives = 56/121 (46%)
Query: 169 NQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFA 228
N++ IP F LV L +N L S+ TF G L L+L N L L F
Sbjct: 66 NRIQRIPEDFFIFYGDLVYLDFRNNSLRSLEEGTFSGSAKLVFLDLSYNNLTQLGAGAFR 125
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 288
L +L L N + + + FE L +L++L L+DN LRS+ + L L LR+
Sbjct: 126 SAGRLVKLSLANNNLVGVHEDAFETLESLQVLELNDNNLRSLSVAALAALPALRSLRLDG 185
Query: 289 N 289
N
Sbjct: 186 N 186
>ZFIN|ZDB-GENE-040220-5 [details] [associations]
symbol:tlr22 "toll-like receptor 22" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-5 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799 GO:GO:0052033
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 EMBL:BC163527
IPI:IPI00898178 RefSeq:NP_001122147.1 UniGene:Dr.30190
ProteinModelPortal:B3DJL6 STRING:B3DJL6 GeneID:403135
KEGG:dre:403135 CTD:403135 HOVERGEN:HBG055859 NextBio:20816896
Uniprot:B3DJL6
Length = 947
Score = 193 (73.0 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 58/177 (32%), Positives = 88/177 (49%)
Query: 138 IQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSS 197
+++L L+ N++ V ++ Q +SL+ +DLS N + + F ++ L L NK+SS
Sbjct: 355 LKKLQLQINKLTRVTNSFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISS 414
Query: 198 VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTAL 257
+ + F LKSL+VL L N L + D L+EL L N++S I F L L
Sbjct: 415 IRSCLFKDLKSLEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKSHTFGNLPQL 474
Query: 258 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT--TLAD--GAFNGLGRLSALDL 310
L L+DNQ+ + +F L L L + N T TL F+G+ L LDL
Sbjct: 475 NNLSLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNLDL 531
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 54/189 (28%), Positives = 93/189 (49%)
Query: 135 NPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
+P ++ L L +IK + + + S L +DL N++ N+ F ++L +LQL N
Sbjct: 304 SPMLRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQIN 363
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
KL+ V N +F L SL+ ++L N + L FA L+ ++ L L N+IS I F+
Sbjct: 364 KLTRVTN-SFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKD 422
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L +L +L L N L + L EL++ N + + F L +L+ L L
Sbjct: 423 LKSLEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDN 482
Query: 314 GLTNMMGHS 322
++ + G++
Sbjct: 483 QISEIEGYA 491
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/180 (27%), Positives = 79/180 (43%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ L L N I + S + + L+ + L N+L + F+ L + L+ N +
Sbjct: 331 LSELDLGGNEISNLSQSMFRGFKQLKKLQLQINKLTRVT-NSFQILTSLEFIDLSRNHIH 389
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
++ F L +K L L N + + LF L LE L LG N + +ID G
Sbjct: 390 KLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLKSLEVLRLGTNNLLKIDDVFSNGPYF 449
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L+ L L N+L + + +F L L L + N + + AF GL L++L L +T
Sbjct: 450 LKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGYAFGGLENLTSLFLSSNKIT 509
Score = 139 (54.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+D+S N I I L L +++NK+S + + F L +L LNL N L +
Sbjct: 63 LDISFNSFAQIQIEDLNILLNLQYLNVSNNKISKIQDGAFGSLFNLTDLNLASNRLNAVS 122
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM-LA 282
+ + L++L L L +N IS I ++ F L +L++L L N LR + + + L
Sbjct: 123 NGMLRGLTNLLVLRLDRNYISVIKESAFSTLHSLQVLNLSKNHLRHIDDVKPVLASLYLE 182
Query: 283 ELRVGLNVF 291
EL +G N F
Sbjct: 183 ELYIGSNYF 191
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 150 TVDSAIQFYSSLQHVDLSHN-QLVNIPIRGFEPQEKLVELQLNHN-KLSSVNNKTFIGLK 207
T S + +L +D++ + Q + ++ F L +++LN N +L+ + +
Sbjct: 248 TEKSYLASVKTLYFMDVNMSIQTADNVLQSFN--NTLNKIRLNGNVRLNKTSLLLSVCSP 305
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
L+VL L ++ L + +F P S L ELDLG N IS + Q+ F G L+ L L N+L
Sbjct: 306 MLRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQINKL 365
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
V T SF L L + + N L+ F L ++ L L
Sbjct: 366 TRV-TNSFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYL 407
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 195 (73.7 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 51/163 (31%), Positives = 80/163 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQ 162
S CP C C++ +V C+ L IP L I + L+ N IK + + A Y L+
Sbjct: 277 SISCPSPCTCSNN--IVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLK 334
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+D+S NQ+ +I F+ + L L L NK++ + F GL SL++L L N + L
Sbjct: 335 RIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCL 394
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L +++ L+L N
Sbjct: 395 RVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/186 (29%), Positives = 91/186 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C+ + V C L +P + + +RL L N I + + + F +L+ +
Sbjct: 34 CPTKCTCSAAS--VDCHGLGLRAVPRGIPRNAERLDLDRNNITRI-TKMDFAGLKNLRVL 90
Query: 165 DLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L NQ V++ RG F+ ++L L+LN NKL + F L L+L N ++ +P
Sbjct: 91 HLEDNQ-VSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIP 149
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F ++ ++ L L N IS I+ F L L IL L++N + + SF ++ +
Sbjct: 150 RKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRT 209
Query: 284 LRVGLN 289
LR+ N
Sbjct: 210 LRLHSN 215
Score = 179 (68.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 50/161 (31%), Positives = 77/161 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--SLQHV 164
CP C C E +V C L IP L + L L N + +++ F +L+ +
Sbjct: 505 CPEKCRC--EGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKI 562
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ + F+ + EL L N+L +V+ + F GL LK L LR N + + +
Sbjct: 563 NLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSN 622
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
FA LS + L L NRI+ I F L +L + L N
Sbjct: 623 DTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 175 (66.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 46/140 (32%), Positives = 66/140 (47%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSL 161
Q S CP C C ET VV C L +P + + L L+ N + V + L
Sbjct: 720 QLSPRCPEQCTCM-ET-VVRCSNKGLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHL 777
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+DLS+N + + F L L L++N+L + F GL+SL+VL L GN +
Sbjct: 778 TLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISS 837
Query: 222 LPDRLFAPLSHLEELDLGQN 241
+P+ F L+ L L LG N
Sbjct: 838 VPEGSFNDLTSLSHLALGTN 857
Score = 167 (63.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 45/149 (30%), Positives = 72/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL N + I F + L L L N++S + F LK L+ L L N L+
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N+I I + F G+T ++ L LD+N + + +F L L
Sbjct: 124 LPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + + +FN + ++ L L
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 160 (61.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L+ N ++ + F GLK+L+VL+L N + + F L LE L L +N++ +
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ L L L +NQ++ +P +F + + L++ N + + DGAF L L
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 308 LDLRGAGLTNMM 319
L L ++ ++
Sbjct: 186 LTLNNNNISRIL 197
Score = 155 (59.6 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ N++ ++ A Q L+ + L+ N+L +P F+ KL L L+ N++
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ K F G+ +K L L N + + D F L LE L L N ISRI F +
Sbjct: 146 QGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 256 ALRILYLDDNQL 267
+R L L N L
Sbjct: 206 KIRTLRLHSNHL 217
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 51/167 (30%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +LV IP P E + +L+LN N++S + F L +L+ +NL N ++++
Sbjct: 516 VDCSNQKLVRIP--SHLP-EYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEV 572
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + ++EL L N++ + F GL+ L+ L L N + V +F L +
Sbjct: 573 REGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVR 632
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+ GAF L LS ++L N H LG +L
Sbjct: 633 LLSLYDNRITTITPGAFTTLVSLSTINLLSNPF-NCNCHLAWLGKWL 678
Score = 149 (57.5 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 45/126 (35%), Positives = 67/126 (53%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P RG P++ + EL L N L++V + L+ L +++L N + L
Sbjct: 736 VRCSNKGLRALP-RGM-PKD-VTELYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLT 791
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ +SHL L L NR+ I F GL +LR+L L N + SVP SF L L+
Sbjct: 792 NYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSH 851
Query: 284 LRVGLN 289
L +G N
Sbjct: 852 LALGTN 857
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N + IP F +KL + ++ N++S + F GLKSL L L GN + ++
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIV 371
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L L+ L L N+I+ + F+ L L +L L DN+L+++ F L +
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 284 LRVGLNVF 291
L + N F
Sbjct: 432 LHLAQNPF 439
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L+ IP P E +VE++L N + ++ F K LK +++ N + D+
Sbjct: 291 VDCRGKGLMEIPAN--LP-EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIA 347
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ I + F+GL +L++L L+ N++ + +F L L
Sbjct: 348 PDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNL 407
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N T++ G F L + L L
Sbjct: 408 LSLYDNKLQTISKGLFAPLQSIQTLHL 434
Score = 132 (51.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 38/104 (36%), Positives = 53/104 (50%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN L +P L A L HL +DL N IS + F ++ L L L N+
Sbjct: 752 KDVTELYLEGNHLTAVPRELSA-LRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 810
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR +P +F L L L + N +++ +G+FN L LS L L
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 81 (33.6 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
EG+ +R L+ N ++++P +F L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 312 GAGLTNMM 319
G +T ++
Sbjct: 364 GNKITEIV 371
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 195 (73.7 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 51/163 (31%), Positives = 80/163 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSSLQ 162
S CP C C++ +V C+ L IP L I + L+ N IK + + A Y L+
Sbjct: 277 SISCPSPCTCSNN--IVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLK 334
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+D+S NQ+ +I F+ + L L L NK++ + F GL SL++L L N + L
Sbjct: 335 RIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCL 394
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L +L L L N++ I + F L +++ L+L N
Sbjct: 395 RVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/186 (29%), Positives = 91/186 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C+ + V C L +P + + +RL L N I + + + F +L+ +
Sbjct: 34 CPTKCTCSAAS--VDCHGLGLRAVPRGIPRNAERLDLDRNNITRI-TKMDFAGLKNLRVL 90
Query: 165 DLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
L NQ V++ RG F+ ++L L+LN NKL + F L L+L N ++ +P
Sbjct: 91 HLEDNQ-VSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIP 149
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F ++ ++ L L N IS I+ F L L IL L++N + + SF ++ +
Sbjct: 150 RKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRT 209
Query: 284 LRVGLN 289
LR+ N
Sbjct: 210 LRLHSN 215
Score = 179 (68.1 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 50/161 (31%), Positives = 77/161 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYS--SLQHV 164
CP C C E +V C L IP L + L L N + +++ F +L+ +
Sbjct: 505 CPEKCRC--EGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKI 562
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ + F+ + EL L N+L +V+ + F GL LK L LR N + + +
Sbjct: 563 NLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSN 622
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
FA LS + L L NRI+ I F L +L + L N
Sbjct: 623 DTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 175 (66.7 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 46/140 (32%), Positives = 66/140 (47%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSL 161
Q S CP C C ET VV C L +P + + L L+ N + V + L
Sbjct: 720 QLSPRCPEQCTCM-ET-VVRCSNKGLRALPRGMPKDVTELYLEGNHLTAVPRELSALRHL 777
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+DLS+N + + F L L L++N+L + F GL+SL+VL L GN +
Sbjct: 778 TLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISS 837
Query: 222 LPDRLFAPLSHLEELDLGQN 241
+P+ F L+ L L LG N
Sbjct: 838 VPEGSFNDLTSLSHLALGTN 857
Score = 167 (63.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 45/149 (30%), Positives = 72/149 (48%)
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DL N + I F + L L L N++S + F LK L+ L L N L+
Sbjct: 64 ERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQV 123
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP+ LF L LDL +N+I I + F G+T ++ L LD+N + + +F L L
Sbjct: 124 LPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDL 183
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N + + +FN + ++ L L
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 160 (61.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L L+ N ++ + F GLK+L+VL+L N + + F L LE L L +N++ +
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F+ L L L +NQ++ +P +F + + L++ N + + DGAF L L
Sbjct: 126 ELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEI 185
Query: 308 LDLRGAGLTNMM 319
L L ++ ++
Sbjct: 186 LTLNNNNISRIL 197
Score = 155 (59.6 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 41/132 (31%), Positives = 65/132 (49%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L L+ N++ ++ A Q L+ + L+ N+L +P F+ KL L L+ N++
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ K F G+ +K L L N + + D F L LE L L N ISRI F +
Sbjct: 146 QGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 256 ALRILYLDDNQL 267
+R L L N L
Sbjct: 206 KIRTLRLHSNHL 217
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 51/167 (30%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
VD S+ +LV IP P E + +L+LN N++S + F L +L+ +NL N ++++
Sbjct: 516 VDCSNQKLVRIP--SHLP-EYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEV 572
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F + ++EL L N++ + F GL+ L+ L L N + V +F L +
Sbjct: 573 REGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVR 632
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT+ GAF L LS ++L N H LG +L
Sbjct: 633 LLSLYDNRITTITPGAFTTLVSLSTINLLSNPF-NCNCHLAWLGKWL 678
Score = 149 (57.5 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 45/126 (35%), Positives = 67/126 (53%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
V S+ L +P RG P++ + EL L N L++V + L+ L +++L N + L
Sbjct: 736 VRCSNKGLRALP-RGM-PKD-VTELYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLT 791
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F+ +SHL L L NR+ I F GL +LR+L L N + SVP SF L L+
Sbjct: 792 NYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSH 851
Query: 284 LRVGLN 289
L +G N
Sbjct: 852 LALGTN 857
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L N + IP F +KL + ++ N++S + F GLKSL L L GN + ++
Sbjct: 312 IRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIV 371
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
LF L L+ L L N+I+ + F+ L L +L L DN+L+++ F L +
Sbjct: 372 KGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT 431
Query: 284 LRVGLNVF 291
L + N F
Sbjct: 432 LHLAQNPF 439
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD L+ IP P E +VE++L N + ++ F K LK +++ N + D+
Sbjct: 291 VDCRGKGLMEIPAN--LP-EGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIA 347
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F L L L L N+I+ I + F+GL +L++L L+ N++ + +F L L
Sbjct: 348 PDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNL 407
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N T++ G F L + L L
Sbjct: 408 LSLYDNKLQTISKGLFAPLQSIQTLHL 434
Score = 132 (51.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 38/104 (36%), Positives = 53/104 (50%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K + L L GN L +P L A L HL +DL N IS + F ++ L L L N+
Sbjct: 752 KDVTELYLEGNHLTAVPRELSA-LRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNR 810
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR +P +F L L L + N +++ +G+FN L LS L L
Sbjct: 811 LRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLAL 854
Score = 81 (33.6 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
EG+ +R L+ N ++++P +F L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 312 GAGLTNMM 319
G +T ++
Sbjct: 364 GNKITEIV 371
>UNIPROTKB|Q86UE6 [details] [associations]
symbol:LRRTM1 "Leucine-rich repeat transmembrane neuronal
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007610 "behavior" evidence=IEA] [GO:0035418 "protein
localization to synapse" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0060076 "excitatory synapse"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030426
"growth cone" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005886 EMBL:CH471053 GO:GO:0007610 GO:GO:0030054
GO:GO:0045211 GO:GO:0030424 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 GO:GO:0030426 InterPro:IPR000372
SMART:SM00013 GO:GO:0035418 CTD:347730 HOGENOM:HOG000290681
HOVERGEN:HBG052362 KO:K16665 OrthoDB:EOG4FN4HG EMBL:AY182024
EMBL:AK056644 EMBL:AK290512 EMBL:AY358310 EMBL:BC045113
IPI:IPI00328716 RefSeq:NP_849161.2 UniGene:Hs.591580
ProteinModelPortal:Q86UE6 SMR:Q86UE6 MINT:MINT-7027295
STRING:Q86UE6 PhosphoSite:Q86UE6 DMDM:146330009 PRIDE:Q86UE6
DNASU:347730 Ensembl:ENST00000295057 Ensembl:ENST00000409148
Ensembl:ENST00000417012 Ensembl:ENST00000433224 GeneID:347730
KEGG:hsa:347730 UCSC:uc002sok.1 GeneCards:GC02M080427
H-InvDB:HIX0002207 HGNC:HGNC:19408 MIM:610867 neXtProt:NX_Q86UE6
PharmGKB:PA134887293 InParanoid:Q86UE6 OMA:EPDLFHG PhylomeDB:Q86UE6
GenomeRNAi:347730 NextBio:99250 ArrayExpress:Q86UE6 Bgee:Q86UE6
CleanEx:HS_LRRTM1 Genevestigator:Q86UE6 GermOnline:ENSG00000162951
Uniprot:Q86UE6
Length = 522
Score = 189 (71.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I +V A Q ++ + LS NQ+ +P F P L + L++NKL ++
Sbjct: 94 LYLDHNHICSVQGDAFQKLRRVKELTLSSNQITQLPNTTFRPMPNLRSVDLSYNKLQALA 153
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F GL+ L L++R N ++ +P R+F L+ LD+G N++ + + F GL L
Sbjct: 154 PDLFHGLRKLTTLHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTE 213
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
L+L+ N L V F L L L + N + + + + L +DL G + M
Sbjct: 214 LHLEHNDLVKVNFAHFPRLISLHSLCLRRNKVAIVVS-SLDWVWNLEKMDLSGNEIEYME 272
Query: 320 GH 321
H
Sbjct: 273 PH 274
Score = 181 (68.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 48/152 (31%), Positives = 73/152 (48%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S L + L +N L + F +L L L+HN + SV F L+ +K L L N
Sbjct: 65 SGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTLSSNQ 124
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
+ LP+ F P+ +L +DL N++ + F GL L L++ N ++ VP F
Sbjct: 125 ITQLPNTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRIFQDC 184
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L +G N +LA +F GL +L+ L L
Sbjct: 185 RSLKFLDIGYNQLKSLARNSFAGLFKLTELHL 216
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 46/128 (35%), Positives = 66/128 (51%)
Query: 141 LVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L ++ N I+ V I Q SL+ +D+ +NQL ++ F KL EL L HN L VN
Sbjct: 166 LHMRANAIQFVPVRIFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVN 225
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F L SL L LR N + + L + +LE++DL N I ++ FE + L+
Sbjct: 226 FAHFPRLISLHSLCLRRNKVAIVVSSLDW-VWNLEKMDLSGNEIEYMEPHVFETVPHLQS 284
Query: 260 LYLDDNQL 267
L LD N+L
Sbjct: 285 LQLDSNRL 292
>ZFIN|ZDB-GENE-040310-1 [details] [associations]
symbol:rtn4r "reticulon 4 receptor" species:7955
"Danio rerio" [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IGI;IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040310-1 GO:GO:0007411 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GO:GO:0048936 HOGENOM:HOG000116109 HOVERGEN:HBG063707
CTD:65078 EMBL:AY257178 IPI:IPI00490487 RefSeq:NP_982345.1
UniGene:Dr.30202 ProteinModelPortal:Q6X3Y5 SMR:Q6X3Y5 GeneID:403306
KEGG:dre:403306 InParanoid:Q6X3Y5 NextBio:20816915 Uniprot:Q6X3Y5
Length = 479
Score = 188 (71.2 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 65/222 (29%), Positives = 100/222 (45%)
Query: 107 CPPDCDCNDET-LVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVD 165
CP C C E V C++ L IP + QR+ L+ N++ V S +SS+ ++
Sbjct: 27 CPAKCVCYSEPKATVACQQQGLFSIPTEIPVRSQRIFLQSNKLTVVRSTS--FSSVHNLT 84
Query: 166 ---LSHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ N + +I F E+L EL + N L ++ F GL L L+L L +
Sbjct: 85 VLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISPTAFRGLTKLHTLHLHRCGLSE 144
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
LP +F L L+ L L N + + + F L L L+L +N+++ V L L
Sbjct: 145 LPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLHNNKIKVVTDHMLRGLVNL 204
Query: 282 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
L + N + AFN L +L+ L L LT + G SM
Sbjct: 205 DRLLLHQNRIVHVQQQAFNDLSKLTTLFLFFNNLTMLTGESM 246
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 58/193 (30%), Positives = 83/193 (43%)
Query: 127 LDVIPITLNPSIQRLVLKY---NRIKTVDSAIQFYS--SLQHVDLSHNQLVNI--PIRGF 179
L V+ T S+ L + + N I +++ FY L+ +D+ N + I P F
Sbjct: 69 LTVVRSTSFSSVHNLTVLWMYSNNISHIEAGA-FYGLERLEELDIGDNSNLRIISPT-AF 126
Query: 180 EPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLG 239
KL L L+ LS + F GL SL+ L L+ N L L + F L++L L L
Sbjct: 127 RGLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLH 186
Query: 240 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 299
N+I + GL L L L N++ V +F L L L + N T L +
Sbjct: 187 NNKIKVVTDHMLRGLVNLDRLLLHQNRIVHVQQQAFNDLSKLTTLFLFFNNLTMLTGESM 246
Query: 300 NGLGRLSALDLRG 312
N L L L L G
Sbjct: 247 NPLVSLQYLRLNG 259
Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 41/137 (29%), Positives = 63/137 (45%)
Query: 153 SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVL 212
+A + + L + L L +P+ F L L L N L +++ TF+ L +L L
Sbjct: 124 TAFRGLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYL 183
Query: 213 NLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 272
L N ++ + D + L +L+ L L QNRI + Q F L+ L L+L N L +
Sbjct: 184 FLHNNKIKVVTDHMLRGLVNLDRLLLHQNRIVHVQQQAFNDLSKLTTLFLFFNNLTMLTG 243
Query: 273 PSFIYLGMLAELRVGLN 289
S L L LR+ N
Sbjct: 244 ESMNPLVSLQYLRLNGN 260
>UNIPROTKB|E1BB32 [details] [associations]
symbol:GP1BA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042730 "fibrinolysis" evidence=IEA] [GO:0031362
"anchored to external side of plasma membrane" evidence=IEA]
[GO:0007599 "hemostasis" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0000902 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 GO:GO:0007599 GO:GO:0031362 CTD:2811 KO:K06261
GeneTree:ENSGT00690000102197 OMA:VPRAWLL EMBL:DAAA02048753
IPI:IPI00715197 RefSeq:XP_002695841.1 UniGene:Bt.44143
Ensembl:ENSBTAT00000006460 GeneID:504977 KEGG:bta:504977
NextBio:20866919 Uniprot:E1BB32
Length = 650
Score = 190 (71.9 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 57/177 (32%), Positives = 92/177 (51%)
Query: 108 PPDCDCNDETLVVTCKEANLDVIPIT--LNPS-IQRLVLKYNRIKTVDSAIQFYSSLQHV 164
PPD +T ++ E L + LN S + L L +++ ++ + + L+ +
Sbjct: 42 PPDLPA--DTAILHLGENPLGTFSMASVLNLSQLTELFLGKSQLTSLQADAKL-PRLEVL 98
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+L+HN+L ++P G L L ++ N+L+S+ + T GL L+ L LRGN L LP
Sbjct: 99 NLAHNKLRSLPKLG-RALPVLSILDVSFNELTSLPSDTLHGLSRLQELYLRGNQLRTLPP 157
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
L P HL++L L +N + + +GL L LYL N+LR++PT F GML
Sbjct: 158 ELLVPTPHLKKLSLAENDLQELPPELLKGLEELDTLYLQKNRLRTIPTDFF---GML 211
Score = 125 (49.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 45/146 (30%), Positives = 65/146 (44%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N L + +L EL L ++L+S+ L L+VLNL N L LP +
Sbjct: 54 LGENPLGTFSMASVLNLSQLTELFLGKSQLTSLQADA--KLPRLEVLNLAHNKLRSLP-K 110
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
L L L LD+ N ++ + GL+ L+ LYL NQLR++P + L +L
Sbjct: 111 LGRALPVLSILDVSFNELTSLPSDTLHGLSRLQELYLRGNQLRTLPPELLVPTPHLKKLS 170
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLR 311
+ N L GL L L L+
Sbjct: 171 LAENDLQELPPELLKGLEELDTLYLQ 196
>UNIPROTKB|Q28256 [details] [associations]
symbol:GP1BA "Platelet glycoprotein Ib alpha chain"
species:9615 "Canis lupus familiaris" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007596
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U19489 RefSeq:NP_001003083.1 UniGene:Cfa.3503 PDB:1K14
PDBsum:1K14 ProteinModelPortal:Q28256 SMR:Q28256 GeneID:403638
KEGG:cfa:403638 CTD:2811 HOVERGEN:HBG051790 KO:K06261
NextBio:20817143 Uniprot:Q28256
Length = 677
Score = 190 (71.9 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 46/115 (40%), Positives = 65/115 (56%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ +D+SHN+L ++P G L L + N+L +++ T GL L L LRGN L+
Sbjct: 95 LETLDVSHNRLKSLPSLG-RALPALTTLDASFNELVALSPGTLDGLSHLHELYLRGNKLK 153
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
LP RL AP + L +L+L NR++ + EGL L LYL N LR+VP F
Sbjct: 154 TLPPRLLAPTAQLRKLNLADNRLTELPPGFLEGLGELDTLYLQGNWLRTVPKGFF 208
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/132 (30%), Positives = 61/132 (46%)
Query: 181 PQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ 240
P +L +L L ++L+ + L L+ L++ N L+ LP L L L LD
Sbjct: 69 PLTRLAQLHLRQSQLTQLQVDGM--LPRLETLDVSHNRLKSLPS-LGRALPALTTLDASF 125
Query: 241 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 300
N + + +GL+ L LYL N+L+++P L +L + N T L G
Sbjct: 126 NELVALSPGTLDGLSHLHELYLRGNKLKTLPPRLLAPTAQLRKLNLADNRLTELPPGFLE 185
Query: 301 GLGRLSALDLRG 312
GLG L L L+G
Sbjct: 186 GLGELDTLYLQG 197
Score = 116 (45.9 bits), Expect = 0.00095, P = 0.00095
Identities = 37/130 (28%), Positives = 60/130 (46%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
P ++ L + +NR+K++ S + +L +D S N+LV + + L EL L NKL
Sbjct: 93 PRLETLDVSHNRLKSLPSLGRALPALTTLDASFNELVALSPGTLDGLSHLHELYLRGNKL 152
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + L+ LNL N L +LP L L+ L L N + + + F L
Sbjct: 153 KTLPPRLLAPTAQLRKLNLADNRLTELPPGFLEGLGELDTLYLQGNWLRTVPKGFFGDLL 212
Query: 256 ALRILYLDDN 265
L +L N
Sbjct: 213 -LPFTFLHGN 221
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 189 (71.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 56/159 (35%), Positives = 78/159 (49%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
LQ + L N+L ++ + L ELQL+ N L S+ F L+SL L L N LE
Sbjct: 196 LQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLE 255
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
LP LF +L L L +N + + + F + LR L L QLR++P +F L
Sbjct: 256 FLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTG 315
Query: 281 LAELRVGLNV-FTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L V L+ + L + AF GLG L L L GL ++
Sbjct: 316 LRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASL 354
Score = 180 (68.4 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 54/174 (31%), Positives = 85/174 (48%)
Query: 138 IQRLVLKYNRIKTVDSAIQFY-SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+Q L L N++ + +++ + +L+ +DLS N L ++P F Q KL +L L+ N+L+
Sbjct: 148 LQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLA 207
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
S+ + L++L L L N L + F L L L L +NR+ + A F
Sbjct: 208 SLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHN 267
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L L +N L +P F +G L ELR+ TL AF L L L++
Sbjct: 268 LTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEV 321
Score = 172 (65.6 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 59/185 (31%), Positives = 89/185 (48%)
Query: 129 VIPITLNPSIQ--RLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKL 185
+ P T N I+ L L N+I + SA+ L+ + L N+L ++ F+ L
Sbjct: 89 IAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHL 148
Query: 186 VELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISR 245
EL LN N+L+ + F L +LK+L+L GN L LP+ LF L++L L NR++
Sbjct: 149 QELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLAS 208
Query: 246 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
++ + L AL L L N LRS+ +F L L+ L + N L F L
Sbjct: 209 LESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNL 268
Query: 306 SALDL 310
+ L L
Sbjct: 269 TFLTL 273
Score = 171 (65.3 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 58/211 (27%), Positives = 96/211 (45%)
Query: 102 QASAF-CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVL-KYNRIKTVDSAIQFYS 159
+A F CPP C C + + + L ++ ++L + R +++ +
Sbjct: 15 RAQPFPCPPTCRCAFRDAAQCSRGTVAGIAALGLPTNLTHILLFQMGRGTLQNNSFSDMT 74
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
LQ + LS + + I F KL L+L+ NK++ + + L L+ L L GN L
Sbjct: 75 VLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNEL 134
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
+ L LF L HL+EL L QN+++ + + F L L++L L N L +P F
Sbjct: 135 KSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQV 194
Query: 280 MLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L +L + N +L G + L L+ L L
Sbjct: 195 KLQKLLLHSNRLASLESGLLDSLRALTELQL 225
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 50/166 (30%), Positives = 76/166 (45%)
Query: 153 SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVL 212
+A+ ++L H+ L + F L L L+ + +S++ TF LK L
Sbjct: 44 AALGLPTNLTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTL 103
Query: 213 NLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 272
L N + LP L L LE+L L N + +DQ F+ L L+ L+L+ NQL +P
Sbjct: 104 RLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPA 163
Query: 273 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
F +LG L L + N T L +G F +L L L L ++
Sbjct: 164 SLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASL 209
Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 60/202 (29%), Positives = 93/202 (46%)
Query: 120 VTCKEANLDVIPITL---NPSIQRLVLKYNRIKTVDSAIQF--YSSLQHVDLSHNQLVNI 174
+T E L+ +P L + ++ L L N ++ + + F L+ + L QL +
Sbjct: 247 LTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVL-FGEIGGLRELRLKSTQLRTL 305
Query: 175 PIRGFEPQEKLVELQLNHN-KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHL 233
P F L L+++ + +LS++ F GL L+VL L L LP L L L
Sbjct: 306 PAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRL 365
Query: 234 EELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 293
+ L NR+ + A F L++L + LD NQL ++P +F L LA + +G N +
Sbjct: 366 RHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGVLLGHNPWR- 424
Query: 294 LADGAFNGLGRLSALDLRGAGL 315
D GLG A R AGL
Sbjct: 425 -CDC---GLGPFLAWLRRHAGL 442
Score = 152 (58.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 54/183 (29%), Positives = 83/183 (45%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++L L N +K++D + Q LQ + L+ NQL +P F L L L+ N L+
Sbjct: 124 LEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLT 183
Query: 197 SVNNKTF-IGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ F + +K K+L L N L L L L L EL L N + I F+ L
Sbjct: 184 HLPEGLFGVQVKLQKLL-LHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLR 242
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
+L L L +N+L +P+ F++ L L + N L F +G L L L+ L
Sbjct: 243 SLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQL 302
Query: 316 TNM 318
+
Sbjct: 303 RTL 305
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 50/186 (26%), Positives = 77/186 (41%)
Query: 137 SIQRLVLKYNRIKT-VDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L N +++ V A SL + LS N+L +P F L L L+ N L
Sbjct: 219 ALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPL 278
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN-RISRIDQACFEGL 254
+ F + L+ L L+ L LP F L+ L L++ + R+S + + F GL
Sbjct: 279 EELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGL 338
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L++L L L S+P L L + + N L F L L + L
Sbjct: 339 GELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQ 398
Query: 315 LTNMMG 320
L + G
Sbjct: 399 LETLPG 404
>UNIPROTKB|F1ND28 [details] [associations]
symbol:TLR21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043408 "regulation of MAPK cascade"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0004888 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:AADN02065737 IPI:IPI00590323
Ensembl:ENSGALT00000001120 OMA:NSADESW ArrayExpress:F1ND28
Uniprot:F1ND28
Length = 972
Score = 196 (74.1 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 64/193 (33%), Positives = 96/193 (49%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L+ NR+ + S + Q + LQ +DL N L ++ + + KL L L+ N+L
Sbjct: 468 LRTLNLRNNRVSVLFSGVFQGLAELQTLDLGGNNLRHLTAQSLQGLPKLRRLYLDRNRLL 527
Query: 197 SVNNKTFIGLKS-LKVLNLRGNFLEDLPDRLFAP-----LSHLEELDLGQNR---ISRID 247
V++ F +++ L VL+LR N L+ + L P LS L +L L + + +
Sbjct: 528 EVSSTVFAPVQATLGVLDLRANNLQYISQWLRKPPPFRNLSSLYDLKLQAQQPYGLKMLP 587
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG--LNVFTTLADGAFNGLGRL 305
F+GL L+ L L N LRS+P F LG L L + N L DG F LG L
Sbjct: 588 HYFFQGLVRLQQLSLSQNMLRSIPPDVFEDLGQLRSLALADSSNGLHDLPDGIFRNLGNL 647
Query: 306 SALDLRGAGLTNM 318
LDL AGL ++
Sbjct: 648 RFLDLENAGLHSL 660
Score = 190 (71.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 57/166 (34%), Positives = 85/166 (51%)
Query: 116 ETLVVTCKEANL-DVIPITLN----PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHN 169
E L V E NL +P L P + + ++NRI TV A + +LQ + L+ N
Sbjct: 369 EKLEVLTVEHNLLKKLPSCLGAQVLPRLYNISFRFNRILTVGPQAFAYAPALQVLWLNIN 428
Query: 170 QLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAP 229
LV + + L EL+L++N L+ + + +FI L L+ LNLR N + L +F
Sbjct: 429 SLVWLDRQALWRLHNLTELRLDNNLLTDLYHNSFIDLHRLRTLNLRNNRVSVLFSGVFQG 488
Query: 230 LSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
L+ L+ LDLG N + + +GL LR LYLD N+L V + F
Sbjct: 489 LAELQTLDLGGNNLRHLTAQSLQGLPKLRRLYLDRNRLLEVSSTVF 534
Score = 161 (61.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 63/207 (30%), Positives = 103/207 (49%)
Query: 127 LDVIPITLN-P-SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIP----IRGF 179
LD + + L P +++RL L+ N +K + +A+Q L+ +DLS N+L ++ + G
Sbjct: 306 LDKVCLRLQGPQALRRLQLQRNGLKVLHCNALQLCPVLRELDLSWNRLQHVGCAGRLLGK 365
Query: 180 EPQEKLVELQLNHNKLSSVNNKTFIGLKSL-KVLNL--RGNFLEDLPDRLFAPLSHLEEL 236
+ +EKL L + HN L + + +G + L ++ N+ R N + + + FA L+ L
Sbjct: 366 KQREKLEVLTVEHNLLKKL--PSCLGAQVLPRLYNISFRFNRILTVGPQAFAYAPALQVL 423
Query: 237 DLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 296
L N + +D+ L L L LD+N L + SFI L L L + N + L
Sbjct: 424 WLNINSLVWLDRQALWRLHNLTELRLDNNLLTDLYHNSFIDLHRLRTLNLRNNRVSVLFS 483
Query: 297 GAFNGLGRLSALDLRGAGLTNMMGHSM 323
G F GL L LDL G L ++ S+
Sbjct: 484 GVFQGLAELQTLDLGGNNLRHLTAQSL 510
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 54/181 (29%), Positives = 85/181 (46%)
Query: 134 LNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
L P L L YN+++ + SA + L +DL++N L + F LV L L+H
Sbjct: 71 LPPHAIALNLSYNKMRCLQPSAFAHLTQLHTLDLTYNLLETLSPGAFNGLGVLVVLDLSH 130
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ--AC 250
NKL+++ F L +L L ++ N L + PL +L L L R++ + A
Sbjct: 131 NKLTTLAEGVFNSLGNLSSLQVQHNPLSTVSPSALLPLVNLRRLSLRGGRLNGLGAVAAA 190
Query: 251 FEGLTALRILYLDDNQLRSV-PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 309
+GL L +L L +N L ++ P P L L++ N LA G+ + L + LD
Sbjct: 191 VQGLAQLELLDLCENNLTTLGPGPPLP--ASLLTLQLCNNSLRELAGGSPDMLWHVKILD 248
Query: 310 L 310
L
Sbjct: 249 L 249
Score = 152 (58.6 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 138 IQRLVLKYNRIKTVDSAI--QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L +++N +K + S + Q L ++ N+++ + + F L L LN N L
Sbjct: 371 LEVLTVEHNLLKKLPSCLGAQVLPRLYNISFRFNRILTVGPQAFAYAPALQVLWLNINSL 430
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
++ + L +L L L N L DL F L L L+L NR+S + F+GL
Sbjct: 431 VWLDRQALWRLHNLTELRLDNNLLTDLYHNSFIDLHRLRTLNLRNNRVSVLFSGVFQGLA 490
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL-GRLSALDLRGAG 314
L+ L L N LR + S L L L + N ++ F + L LDLR
Sbjct: 491 ELQTLDLGGNNLRHLTAQSLQGLPKLRRLYLDRNRLLEVSSTVFAPVQATLGVLDLRANN 550
Query: 315 L 315
L
Sbjct: 551 L 551
Score = 137 (53.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 58/189 (30%), Positives = 86/189 (45%)
Query: 128 DVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVE 187
D+ P +L+ S LVL + V +Q +L+ + L N L + + L E
Sbjct: 288 DIQPRSLDFS--GLVLGAQGLDKVCLRLQGPQALRRLQLQRNGLKVLHCNALQLCPVLRE 345
Query: 188 LQLNHNKLSSVNNK-TFIGLKS---LKVLNLRGNFLEDLPDRLFAP-LSHLEELDLGQNR 242
L L+ N+L V +G K L+VL + N L+ LP L A L L + NR
Sbjct: 346 LDLSWNRLQHVGCAGRLLGKKQREKLEVLTVEHNLLKKLPSCLGAQVLPRLYNISFRFNR 405
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I + F AL++L+L+ N L + + L L ELR+ N+ T L +F L
Sbjct: 406 ILTVGPQAFAYAPALQVLWLNINSLVWLDRQALWRLHNLTELRLDNNLLTDLYHNSFIDL 465
Query: 303 GRLSALDLR 311
RL L+LR
Sbjct: 466 HRLRTLNLR 474
Score = 135 (52.6 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 57/193 (29%), Positives = 82/193 (42%)
Query: 136 PSIQRLVLKYNRIKTVDSAI--QFYSSLQHVDLSHNQLVNIP--IRG---FEPQEKLVEL 188
P ++RL L NR+ V S + ++L +DL N L I +R F L +L
Sbjct: 514 PKLRRLYLDRNRLLEVSSTVFAPVQATLGVLDLRANNLQYISQWLRKPPPFRNLSSLYDL 573
Query: 189 QLNHNK---LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQ--NRI 243
+L + L + + F GL L+ L+L N L +P +F L L L L N +
Sbjct: 574 KLQAQQPYGLKMLPHYFFQGLVRLQQLSLSQNMLRSIPPDVFEDLGQLRSLALADSSNGL 633
Query: 244 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 303
+ F L LR L L++ L S+ F L L L + N T D + L
Sbjct: 634 HDLPDGIFRNLGNLRFLDLENAGLHSLTLEVFGNLSRLQVLHLARNELKTFNDSVASRLS 693
Query: 304 RLSALDLRGAGLT 316
L LDLR L+
Sbjct: 694 SLRYLDLRKCPLS 706
Score = 128 (50.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 39/109 (35%), Positives = 53/109 (48%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
LNL N + L FA L+ L LDL N + + F GL L +L L N+L ++
Sbjct: 78 LNLSYNKMRCLQPSAFAHLTQLHTLDLTYNLLETLSPGAFNGLGVLVVLDLSHNKLTTLA 137
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMG 320
F LG L+ L+V N +T++ A L L L LRG G N +G
Sbjct: 138 EGVFNSLGNLSSLQVQHNPLSTVSPSALLPLVNLRRLSLRG-GRLNGLG 185
Score = 128 (50.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 186 VELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISR 245
+ L L++NK+ + F L L L+L N LE L F L L LDL N+++
Sbjct: 76 IALNLSYNKMRCLQPSAFAHLTQLHTLDLTYNLLETLSPGAFNGLGVLVVLDLSHNKLTT 135
Query: 246 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL--RVG-LNVFTTLADGAFNGL 302
+ + F L L L + N L +V + + L L L R G LN +A A GL
Sbjct: 136 LAEGVFNSLGNLSSLQVQHNPLSTVSPSALLPLVNLRRLSLRGGRLNGLGAVA-AAVQGL 194
Query: 303 GRLSALDLRGAGLTNM 318
+L LDL LT +
Sbjct: 195 AQLELLDLCENNLTTL 210
Score = 120 (47.3 bits), Expect = 0.00054, P = 0.00054
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 232 HLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 291
H L+L N++ + + F LT L L L N L ++ +F LG+L L + N
Sbjct: 74 HAIALNLSYNKMRCLQPSAFAHLTQLHTLDLTYNLLETLSPGAFNGLGVLVVLDLSHNKL 133
Query: 292 TTLADGAFNGLGRLSALDLR 311
TTLA+G FN LG LS+L ++
Sbjct: 134 TTLAEGVFNSLGNLSSLQVQ 153
Score = 37 (18.1 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 10 RKVQGQLDEIFW-IDILDVTY 29
R++ G ++ W + ILD++Y
Sbjct: 231 RELAGGSPDMLWHVKILDLSY 251
>ZFIN|ZDB-GENE-080327-6 [details] [associations]
symbol:flrt1b "fibronectin leucine rich transmembrane
1b" species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR003961 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-080327-6
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104442 EMBL:BX004778 IPI:IPI00876731
Ensembl:ENSDART00000114790 Bgee:F1QF54 Uniprot:F1QF54
Length = 696
Score = 190 (71.9 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 66/182 (36%), Positives = 93/182 (51%)
Query: 136 PSIQRLVLKYNRIKTV---DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
P +++L + N I TV D A L+ + LS N L +IP G P L EL+L+
Sbjct: 129 PLLEKLHMDDNSISTVSIEDKAFTNNPRLRLLFLSRNHLSSIP-SGL-PAS-LEELRLDD 185
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLED--LPDRLFAPLSHLEELDLGQNRISRIDQAC 250
N++S++ F GL SL+ L L GN L + + D F+ LS+L EL L +N + +
Sbjct: 186 NRISTIPTHAFRGLSSLRRLFLDGNLLANQRIADDTFSRLSNLTELSLVRNSL-QAPPLN 244
Query: 251 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L LR LYL DN + +P S + L +L + N TTL G F L LS L +
Sbjct: 245 LPSLHLLR-LYLQDNAIAHMPRGSLDGMRRLQKLDISGNNLTTLPRGLFKDLDSLSQLLV 303
Query: 311 RG 312
RG
Sbjct: 304 RG 305
Score = 165 (63.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 67/208 (32%), Positives = 100/208 (48%)
Query: 119 VVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQL--VNIP 175
VV + LD P L PS++ L L+ N I+T+ SA+ L+ + + N + V+I
Sbjct: 88 VVYLYDNELDDFPTHLPPSLRELHLQDNNIRTLPRSALARLPLLEKLHMDDNSISTVSIE 147
Query: 176 IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLK-SLKVLNLRGNFLEDLPDRLFAPLSHLE 234
+ F +L L L+ N LSS+ + GL SL+ L L N + +P F LS L
Sbjct: 148 DKAFTNNPRLRLLFLSRNHLSSIPS----GLPASLEELRLDDNRISTIPTHAFRGLSSLR 203
Query: 235 ELDLGQNRIS--RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL--NV 290
L L N ++ RI F L+ L L L N L++ P + L L LR+ L N
Sbjct: 204 RLFLDGNLLANQRIADDTFSRLSNLTELSLVRNSLQAPP----LNLPSLHLLRLYLQDNA 259
Query: 291 FTTLADGAFNGLGRLSALDLRGAGLTNM 318
+ G+ +G+ RL LD+ G LT +
Sbjct: 260 IAHMPRGSLDGMRRLQKLDISGNNLTTL 287
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/211 (27%), Positives = 98/211 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIP-ITLNPSIQRLVLKYNRIKT--VDSAIQFYSSLQH 163
CP C C+D + C + L +IP + L ++ L L+ NRI + ++++ +++
Sbjct: 33 CPSACRCDDG--FIYCNDRGLTLIPPLPLTAAV--LYLQNNRIDNAGLPTSLERRLTVRV 88
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE--D 221
V L N+L + P P L EL L N + ++ L L+ L++ N +
Sbjct: 89 VYLYDNELDDFPTH-LPPS--LRELHLQDNNIRTLPRSALARLPLLEKLHMDDNSISTVS 145
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 281
+ D+ F L L L +N +S I L LR LDDN++ ++PT +F L L
Sbjct: 146 IEDKAFTNNPRLRLLFLSRNHLSSIPSGLPASLEELR---LDDNRISTIPTHAFRGLSSL 202
Query: 282 AELRVGLNVFTT--LADGAFNGLGRLSALDL 310
L + N+ +AD F+ L L+ L L
Sbjct: 203 RRLFLDGNLLANQRIADDTFSRLSNLTELSL 233
Score = 152 (58.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 53/165 (32%), Positives = 79/165 (47%)
Query: 130 IPITLNPSIQ-RLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVEL 188
+P +L + R+V Y+ + D SL+ + L N + +P L +L
Sbjct: 76 LPTSLERRLTVRVVYLYDN-ELDDFPTHLPPSLRELHLQDNNIRTLPRSALARLPLLEKL 134
Query: 189 QLNHNKLS--SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRI 246
++ N +S S+ +K F L++L L N L +P L P S LEEL L NRIS I
Sbjct: 135 HMDDNSISTVSIEDKAFTNNPRLRLLFLSRNHLSSIPSGL--PAS-LEELRLDDNRISTI 191
Query: 247 DQACFEGLTALRILYLDDNQLRS--VPTPSFIYLGMLAELRVGLN 289
F GL++LR L+LD N L + + +F L L EL + N
Sbjct: 192 PTHAFRGLSSLRRLFLDGNLLANQRIADDTFSRLSNLTELSLVRN 236
>ZFIN|ZDB-GENE-050506-80 [details] [associations]
symbol:lrrtm1 "leucine rich repeat transmembrane
neuronal 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-050506-80 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CU076051 CTD:347730
HOGENOM:HOG000290681 HOVERGEN:HBG052362 KO:K16665 OMA:EPDLFHG
IPI:IPI00493041 RefSeq:XP_003197743.1 UniGene:Dr.12811
ProteinModelPortal:B8JKM0 IntAct:B8JKM0 Ensembl:ENSDART00000133917
GeneID:570385 KEGG:dre:570385 NextBio:20890105 ArrayExpress:B8JKM0
Bgee:B8JKM0 Uniprot:B8JKM0
Length = 524
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 52/157 (33%), Positives = 84/157 (53%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L +N I+ V+ SA + ++ +DLS N++ ++P F P L L L++N+L S+
Sbjct: 96 LYLDHNNIEIVEESAFERLRRIKELDLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLE 155
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
F GL+ L L+LR N L+ +P R+F ++ LDLG N++ + + F GL L
Sbjct: 156 PDLFHGLRKLTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTE 215
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 296
L+L+ N+L V F L L L + N T + +
Sbjct: 216 LHLEHNELVKVNLAHFPRLISLRTLYMRNNKATIVVN 252
Score = 185 (70.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 51/155 (32%), Positives = 75/155 (48%)
Query: 156 QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLR 215
Q SS + L N + + F +L L L+HN + V F L+ +K L+L
Sbjct: 64 QNLSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLS 123
Query: 216 GNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 275
N +E LP+ F PL +L LDL NR+ ++ F GL L L+L N L+ +P F
Sbjct: 124 TNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPVRIF 183
Query: 276 IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+ L +G N +LA +F GL +L+ L L
Sbjct: 184 QDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHL 218
Score = 174 (66.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 47/131 (35%), Positives = 67/131 (51%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ L L+YN +K + I Q S+Q +DL +NQL ++ F KL EL L HN+L
Sbjct: 165 LTNLHLRYNALKFIPVRIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELV 224
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
VN F L SL+ L +R N + + L +LE++D N I I+ FE +
Sbjct: 225 KVNLAHFPRLISLRTLYMRNNKATIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPK 284
Query: 257 LRILYLDDNQL 267
L L LD N+L
Sbjct: 285 LNTLMLDSNKL 295
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 36/106 (33%), Positives = 55/106 (51%)
Query: 206 LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
L S L+LR N + +L + F LS L L L N I ++++ FE L ++ L L N
Sbjct: 66 LSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKELDLSTN 125
Query: 266 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
++ S+P +F L L L + N +L F+GL +L+ L LR
Sbjct: 126 RIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLR 171
>FB|FBgn0261509 [details] [associations]
symbol:haf "hattifattener" species:7227 "Drosophila
melanogaster" [GO:0008045 "motor neuron axon guidance"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0008045
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 RefSeq:NP_608607.1
UniGene:Dm.18437 ProteinModelPortal:Q9VQ25 SMR:Q9VQ25
MINT:MINT-770476 PRIDE:Q9VQ25 EnsemblMetazoa:FBtr0077875
GeneID:33339 KEGG:dme:Dmel_CG14351 UCSC:CG14351-RA CTD:33339
FlyBase:FBgn0261509 InParanoid:Q9VQ25 OMA:QECIIVC OrthoDB:EOG4PC871
GenomeRNAi:33339 NextBio:783103 ArrayExpress:Q9VQ25 Bgee:Q9VQ25
Uniprot:Q9VQ25
Length = 1316
Score = 193 (73.0 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 55/162 (33%), Positives = 83/162 (51%)
Query: 134 LNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIP----IRGFEPQEKLVELQ 189
L S++ L LK + + V +I+ SL +DLS N + +P IR F+ + L L
Sbjct: 199 LEQSLKNLNLKGTKQRKVPESIRGLKSLAFLDLSQNGIKELPGAGGIRVFDGLDALTALN 258
Query: 190 LNHNKLSSVNNKTFIGL-KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
L N + S+ F G+ K+L L+L N L + P L L LD+G N ++ + +
Sbjct: 259 LERNLIQSIGETAFAGVRKTLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPE 318
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 290
A F G + +L LD N L SVP +F +L A LR GL++
Sbjct: 319 AAFRGNPGITLLALDGNPLSSVPEGAFAHLN--ATLR-GLSL 357
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 125 ANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQ--LVNIPIRGFEP 181
A++ V + + + L L N++ + D A + L + L+ N L + RG E
Sbjct: 142 ADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDNNVTLASNAFRGLE- 200
Query: 182 QEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD----RLFAPLSHLEELD 237
+ L L L K V ++ GLKSL L+L N +++LP R+F L L L+
Sbjct: 201 -QSLKNLNLKGTKQRKVP-ESIRGLKSLAFLDLSQNGIKELPGAGGIRVFDGLDALTALN 258
Query: 238 LGQNRISRIDQACFEGLT-ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 296
L +N I I + F G+ L L L +N L P + L L L +G N+ T+L +
Sbjct: 259 LERNLIQSIGETAFAGVRKTLSSLSLLNNLLAEFPIGAVHSLKELRVLDIGFNLLTSLPE 318
Query: 297 GAFNGLGRLSALDLRGAGLTNM 318
AF G ++ L L G L+++
Sbjct: 319 AAFRGNPGITLLALDGNPLSSV 340
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 55/175 (31%), Positives = 84/175 (48%)
Query: 153 SAIQFYSSLQHVDLSH--NQLVN-IPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKS- 208
+A+ ++ L+ VDL + N ++ +P F L LQL+ + + F G +S
Sbjct: 72 AAMNTHARLKPVDLLYVNNSTISELPDAVFS-NLSLHNLQLSSCGIQRIATGAFKGQESV 130
Query: 209 LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLR 268
L+ LNL+ N L D+P L L LDL +N++S I F GLT L L L+DN
Sbjct: 131 LRNLNLQDNLLADVPVEALKVLGKLNLLDLSKNQLSHIPDDAFVGLTKLSTLKLNDN--- 187
Query: 269 SVPTPSFIYLGMLAELRVGLNVFTTL---ADGAFNGLGRLSALDLRGAGLTNMMG 320
+V S + G+ L+ LN+ T + GL L+ LDL G+ + G
Sbjct: 188 NVTLASNAFRGLEQSLK-NLNLKGTKQRKVPESIRGLKSLAFLDLSQNGIKELPG 241
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 193 (73.0 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 52/167 (31%), Positives = 81/167 (48%)
Query: 102 QASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDS-AIQFYSS 160
+ + CP C C T V C+++ L +P L PS + L+ N+I ++ S + + +
Sbjct: 255 ETAEICPLPCTCTGTT--VDCRDSGLTYVPTNLPPSTTEIRLEQNQISSIPSHSFKNLKN 312
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L +DLS N + I + F L L L N ++ + + TF GL SL++L L N L
Sbjct: 313 LTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLT 372
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
+ F + L L L N I I + F+ LT+L L+L N L
Sbjct: 373 CIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPL 419
Score = 186 (70.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 45/141 (31%), Positives = 70/141 (49%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQ 162
S CPP C C D VV C NL P + L L N I + + + SL
Sbjct: 674 SNLCPPKCSCLDR--VVRCSNKNLTSFPSRIPFDTTELYLDANYINEIPAHDLNRLYSLT 731
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+DLSHN+L+++ F +L L +++NKL + F GL +L++L+L GN + L
Sbjct: 732 KLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFL 791
Query: 223 PDRLFAPLSHLEELDLGQNRI 243
P F+ L+ + + +G N +
Sbjct: 792 PQSAFSNLTSITHIAVGSNSL 812
Score = 177 (67.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 44/134 (32%), Positives = 69/134 (51%)
Query: 105 AFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD--SAIQFYSSLQ 162
+ CP CDC T V C + L+ IP ++ +L+L N I TVD S I +L+
Sbjct: 483 SICPTQCDCYGTT--VDCNKRGLNTIPTSIPRFATQLLLSGNNISTVDLNSNIHVLENLE 540
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+DLS+N + I + FE KL EL+LN NKL ++ +L++L+L GN ++
Sbjct: 541 VLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCF 600
Query: 223 PDRLFAPLSHLEEL 236
F + + E+
Sbjct: 601 SSIFFNKATRIREI 614
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/130 (31%), Positives = 67/130 (51%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
S + L NQ+ +IP F+ + L L L+ N ++ + K F+GL +L L L GN +
Sbjct: 288 STTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNI 347
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DL F L L+ L L N+++ I + F+ + L +L L DN ++S+ +F L
Sbjct: 348 TDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLT 407
Query: 280 MLAELRVGLN 289
L+ L + N
Sbjct: 408 SLSTLHLAKN 417
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 44/147 (29%), Positives = 76/147 (51%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
VD + L +P P E++L N++SS+ + +F LK+L L+L N + ++
Sbjct: 271 VDCRDSGLTYVPTN-LPPST--TEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQ 327
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ F L +L L L N I+ + FEGL +L++L L+ NQL + +F ++ L+
Sbjct: 328 PKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSM 387
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDL 310
L + N ++++ F L LS L L
Sbjct: 388 LSLYDNDIKSISEVTFQNLTSLSTLHL 414
Score = 147 (56.8 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 47/172 (27%), Positives = 78/172 (45%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQ 162
SA CP +C C D T V+C L +P + RL L+ N I + + +L+
Sbjct: 14 SATCPAECVCVDRT--VSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIGPNDFSSLMNLK 71
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+ L NQ+V I + F L +L+L+ N++ + + F L L+L N + +
Sbjct: 72 ALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDITVV 131
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 274
D LE L+L +N I ++ +L +L L+ N+L + PS
Sbjct: 132 SDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGNRLTTFEEPS 183
Score = 124 (48.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 138 IQRLVLKYNR-IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ R+V N+ + + S I F ++ ++D N + IP L +L L+HN+L
Sbjct: 684 LDRVVRCSNKNLTSFPSRIPFDTTELYLDA--NYINEIPAHDLNRLYSLTKLDLSHNRLI 741
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
S+ N TF L L L + N L L F L+ L L L N IS + Q+ F LT+
Sbjct: 742 SLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSNLTS 801
Query: 257 LRILYLDDNQL 267
+ + + N L
Sbjct: 802 ITHIAVGSNSL 812
Score = 87 (35.7 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L+ NQ+ S+P+ SF L L L + N+ T + AF GL L L L G +T++
Sbjct: 294 LEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDL 350
Score = 41 (19.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 66 LNKLRIFINDSVLFSSVSDITMWSXXXXXXXXXXXHQASAFCPPDCDCNDETLVVTCKEA 125
L+ L ++ ND S+S++T + H A P CDCN + L +
Sbjct: 385 LSMLSLYDND---IKSISEVTFQNLTSLSTL----HLAKN--PLICDCNLQWLAQINLQK 435
Query: 126 NLD 128
N++
Sbjct: 436 NIE 438
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 193 (73.0 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C++ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 164 SSGSCPAMCSCSNG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKL 221
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F+ L L L NK++ + F GL +L++L L N +
Sbjct: 222 RRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 281
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ F L +L L L N+I + + F L A++ L+L N
Sbjct: 282 IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 325
Score = 189 (71.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 43/135 (31%), Positives = 71/135 (52%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L +P + ++ L L N+ V + + LQ VDL
Sbjct: 620 CPQECACLDT--VVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 677
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + L + +
Sbjct: 678 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVSTLQEGI 737
Query: 227 FAPLSHLEELDLGQN 241
FA ++ L L +G N
Sbjct: 738 FADVTSLSHLAIGAN 752
Score = 177 (67.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 53/158 (33%), Positives = 74/158 (46%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E VV C L IP + S L L N I +++ F S L+ +
Sbjct: 399 CPHKCRC--EASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLSHLKKI 456
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE + EL L N+L SV + F GL L+ L LR N + + +
Sbjct: 457 NLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHN 516
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F L ++ L L N I+ I F+ L AL L L
Sbjct: 517 DSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 554
Score = 169 (64.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 56/167 (33%), Positives = 83/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
V+ S +L IP R PQ EL+LN+N++S + F L LK +NL N + ++
Sbjct: 410 VECSGLKLSKIPER--IPQST-TELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEI 466
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F + + EL L N++ + F GL LR L L +N++ + SF L +
Sbjct: 467 EDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVR 526
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N TT++ GAF+ L LS L+L A N LGD+L
Sbjct: 527 LLSLYDNHITTISPGAFDTLQALSTLNLL-ANPFNCNCQLAWLGDWL 572
Score = 167 (63.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 43/132 (32%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + +IP F P KL + L++N+++ + F GL+SL L L GN +
Sbjct: 196 TMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKI 255
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I+ I F+ L L +L L DN+++S+ +F L
Sbjct: 256 TDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 315
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 316 AIQTLHLAQNPF 327
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 160 SLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S + L++N++ + G F+ L ++ L++NK+S + + TF G S+ L+L N
Sbjct: 427 STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQ 486
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
LE + +F L L L L NRIS I F GL +R+L L DN + ++ +F L
Sbjct: 487 LESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTL 546
Query: 279 GMLAELRVGLNVF 291
L+ L + N F
Sbjct: 547 QALSTLNLLANPF 559
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
+LN N+L + F ++L L+L N L+ +P + F + L+ L L +N+IS I++
Sbjct: 1 RLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEE 60
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 289
F L L +L L++N + ++P SF ++ L R+ N
Sbjct: 61 GAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 101
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 35/102 (34%), Positives = 47/102 (46%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L+ NQL +P F+ + L L L+ N L +V K F G LK L L N + + +
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
F L LE L L N I+ I + F + LR L N L
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 103
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
E + E++L N + S+ F + L+ ++L N + ++ F L L L L N+
Sbjct: 195 ETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNK 254
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + + F GL L++L L+ N++ + +F L L+ L + N +LA G F L
Sbjct: 255 ITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 314
Query: 303 GRLSALDL 310
+ L L
Sbjct: 315 RAIQTLHL 322
Score = 120 (47.3 bits), Expect = 0.00084, P = 0.00084
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 214 LRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP 273
L N L+ LP+ LF L LDL +N + + + F G T L+ L LD NQ+ +
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 274 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+F L L L + N TT+ +FN + +L L
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 98
Score = 113 (44.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 29/102 (28%), Positives = 48/102 (47%)
Query: 143 LKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L N+++ + + Q +L +DLS N L +P + F L LQL+ N++S +
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
F L+ L+VL L N + +P F + L L N +
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 103
Score = 68 (29.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 195 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 251
Query: 312 GAGLTNM 318
G +T++
Sbjct: 252 GNKITDL 258
>UNIPROTKB|Q86UN2 [details] [associations]
symbol:RTN4RL1 "Reticulon-4 receptor-like 1" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471108 GO:GO:0009986
GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0004872 GO:GO:0045121
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
EMBL:AY250219 EMBL:AF532859 EMBL:BC128608 EMBL:AL834409
EMBL:BK001305 IPI:IPI00328745 RefSeq:NP_848663.1 UniGene:Hs.22917
ProteinModelPortal:Q86UN2 SMR:Q86UN2 STRING:Q86UN2 DMDM:74714017
PRIDE:Q86UN2 Ensembl:ENST00000331238 GeneID:146760 KEGG:hsa:146760
UCSC:uc002ftp.3 CTD:146760 GeneCards:GC17M001786 HGNC:HGNC:21329
HPA:HPA044428 MIM:610461 neXtProt:NX_Q86UN2 PharmGKB:PA134973992
HOGENOM:HOG000116109 HOVERGEN:HBG063707 InParanoid:Q86UN2 KO:K16660
OMA:NCTSHRN OrthoDB:EOG4FXR7G GenomeRNAi:146760 NextBio:85443
Bgee:Q86UN2 CleanEx:HS_RTN4RL1 Genevestigator:Q86UN2
GermOnline:ENSG00000185924 Uniprot:Q86UN2
Length = 441
Score = 186 (70.5 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 68/222 (30%), Positives = 99/222 (44%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP DC C + V+C+ N IP + +R+ L+ NRI + F ++ + +
Sbjct: 25 CPRDCVCYPAPMTVSCQAHNFAAIPEGIPVDSERVFLQNNRIGLLQPG-HFSPAMVTLWI 83
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNK-LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
N + I FE L EL L N+ L ++ +TF GL L L L L LP
Sbjct: 84 YSNNITYIHPSTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHALYLYKCGLSALPAG 143
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
+F L L+ L L N I + F L L L+L N+L S+ +F L L L
Sbjct: 144 VFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGPGTFRGLVNLDRLL 203
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA-LG 326
+ N + AF+ L RL+ L L L+ + G +A LG
Sbjct: 204 LHENQLQWVHHKAFHDLRRLTTLFLFNNSLSELQGECLAPLG 245
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 58/184 (31%), Positives = 84/184 (45%)
Query: 131 PITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHN-QLVNIPIRGFEPQEKLVEL 188
P +P++ L + N I + S + + L+ +DL N QL + F+ KL L
Sbjct: 71 PGHFSPAMVTLWIYSNNITYIHPSTFEGFVHLEELDLGDNRQLRTLAPETFQGLVKLHAL 130
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
L LS++ F GL SL+ L L+ N +E L D +F L +L L L N++ +
Sbjct: 131 YLYKCGLSALPAGVFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGP 190
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
F GL L L L +NQL+ V +F L L L + N + L LG L L
Sbjct: 191 GTFRGLVNLDRLLLHENQLQWVHHKAFHDLRRLTTLFLFNNSLSELQGECLAPLGALEFL 250
Query: 309 DLRG 312
L G
Sbjct: 251 RLNG 254
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 188 (71.2 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 55/184 (29%), Positives = 83/184 (45%)
Query: 104 SAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQ 162
S CP C C +L V C + IP + Q + L+ N I + + L
Sbjct: 21 SLACPSGCRCY--SLTVECGSIGIKEIPQGITQGTQTIFLQDNAIGQIRQRDLSDLGQLH 78
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
++ L +N + + F L+EL LN N++ + F GL L++L L GN + L
Sbjct: 79 YLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDHLRILYLAGNQINRL 138
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F L L+EL L +N + + GL++L +L L N LR++ S L L
Sbjct: 139 EDYTFRGLQRLQELHLQENVLEVLGDQALVGLSSLALLDLSRNNLRTLSPASLKPLVSLQ 198
Query: 283 ELRV 286
LRV
Sbjct: 199 VLRV 202
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 47/134 (35%), Positives = 59/134 (44%)
Query: 190 LNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQA 249
L N + + + L L L L+ N + L F L L EL L NRI I
Sbjct: 58 LQDNAIGQIRQRDLSDLGQLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITAD 117
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 309
F GL LRILYL NQ+ + +F L L EL + NV L D A GL L+ LD
Sbjct: 118 VFRGLDHLRILYLAGNQINRLEDYTFRGLQRLQELHLQENVLEVLGDQALVGLSSLALLD 177
Query: 310 LRGAGLTNMMGHSM 323
L L + S+
Sbjct: 178 LSRNNLRTLSPASL 191
Score = 137 (53.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 141 LVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L+ N I T++ A + L + L+ N++ I F + L L L N+++ +
Sbjct: 80 LYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDHLRILYLAGNQINRLE 139
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
+ TF GL+ L+ L+L+ N LE L D+ LS L LDL +N + + A + L +L++
Sbjct: 140 DYTFRGLQRLQELHLQENVLEVLGDQALVGLSSLALLDLSRNNLRTLSPASLKPLVSLQV 199
Query: 260 LYLDDNQLR 268
L + DN R
Sbjct: 200 LRVTDNPWR 208
Score = 137 (53.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/161 (29%), Positives = 71/161 (44%)
Query: 148 IKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLK 207
IK + I Q + L N + I R +L L L +N +S++ F L
Sbjct: 42 IKEIPQGIT--QGTQTIFLQDNAIGQIRQRDLSDLGQLHYLYLQNNSISTLEPGAFRSLG 99
Query: 208 SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
L L L GN + + +F L HL L L N+I+R++ F GL L+ L+L +N L
Sbjct: 100 LLLELALNGNRIHLITADVFRGLDHLRILYLAGNQINRLEDYTFRGLQRLQELHLQENVL 159
Query: 268 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
+ + + L LA L + N TL+ + L L L
Sbjct: 160 EVLGDQALVGLSSLALLDLSRNNLRTLSPASLKPLVSLQVL 200
>FB|FBgn0032479 [details] [associations]
symbol:CG16974 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
HSSP:P07359 GeneTree:ENSGT00700000105954 FlyBase:FBgn0032479
ChiTaRS:CG16974 EMBL:BT022757 RefSeq:NP_001246018.1
RefSeq:NP_609610.2 UniGene:Dm.10738 SMR:Q9VK28 STRING:Q9VK28
EnsemblMetazoa:FBtr0080489 EnsemblMetazoa:FBtr0305555 GeneID:34713
KEGG:dme:Dmel_CG16974 UCSC:CG16974-RA InParanoid:Q9VK28 OMA:HRIRENC
GenomeRNAi:34713 NextBio:789834 Uniprot:Q9VK28
Length = 1257
Score = 192 (72.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 58/188 (30%), Positives = 88/188 (46%)
Query: 130 IPITLNPSIQRLVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVEL 188
IP+ + ++ L + NR+ +Q+ LQ + L ++L +P R +L L
Sbjct: 222 IPLAVR-RVKVLEMSGNRLSNCSLLNLQYMKQLQELHLDRSELTYLPQRFLGELSELRML 280
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
L+ N L+ + F+G L+ L L GN L LP LF + L+ LDL NR+
Sbjct: 281 NLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLSFPD 340
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
F LR L+L NQL+S+ S L L +L + N + + AF L L AL
Sbjct: 341 NFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVIDRKAFESLDHLLAL 400
Query: 309 DLRGAGLT 316
++ G LT
Sbjct: 401 NVSGNNLT 408
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 47/150 (31%), Positives = 77/150 (51%)
Query: 138 IQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++RL L NR+ + + Q + LQ +DLS N+L++ P F +L +L L N+L
Sbjct: 301 LERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLK 360
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
S+ + L+ L+ L+L N L + + F L HL L++ N ++ + F+ L A
Sbjct: 361 SIGKHSLYSLRELRQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHA 420
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRV 286
LR L L NQ + +P+ F L LR+
Sbjct: 421 LRQLDLSRNQFKQLPSGLFQRQRSLVLLRI 450
Score = 159 (61.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 52/152 (34%), Positives = 69/152 (45%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S L+ ++LS N L +P F KL L L+ N+LS + F L+VL+L N
Sbjct: 275 SELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNR 334
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
L PD FA L +L L +N++ I + L LR L L N L + +F L
Sbjct: 335 LLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVIDRKAFESL 394
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L L V N T L+ F L L LDL
Sbjct: 395 DHLLALNVSGNNLTLLSSIIFQSLHALRQLDL 426
Score = 158 (60.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 60/210 (28%), Positives = 100/210 (47%)
Query: 135 NPSIQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNH 192
N +++L L+ N++K++ YS L+ +DLS N L I + FE + L+ L ++
Sbjct: 346 NGQLRQLHLQRNQLKSIGKH-SLYSLRELRQLDLSQNSLSVIDRKAFESLDHLLALNVSG 404
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAP-----LSHLEELDLGQ--NRISR 245
N L+ +++ F L +L+ L+L N + LP LF L ++E + Q N ISR
Sbjct: 405 NNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSNWISR 464
Query: 246 IDQACFEGLTALRILYLDDNQLRSV---PTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
D++ + R+ YL Q R + P F + EL + N L +GL
Sbjct: 465 YDESLVDPQVLHRLRYLSVQQNRKLTYLPATLFANTPNIRELLLAENGLLQLPT-QISGL 523
Query: 303 GRLSALDLRGAGLTNMMGHSMALGDYLHWI 332
RL L +RG L ++ + L LH++
Sbjct: 524 SRLQRLSVRGNSLGSLPENIKELRQ-LHYL 552
Score = 148 (57.2 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 45/139 (32%), Positives = 66/139 (47%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ + LS N+L +P F+ L L L+ N+L S + F L+ L+L+ N L+
Sbjct: 301 LERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLK 360
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
+ L L +LDL QN +S ID+ FE L L L + N L + + F L
Sbjct: 361 SIGKHSLYSLRELRQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHA 420
Query: 281 LAELRVGLNVFTTLADGAF 299
L +L + N F L G F
Sbjct: 421 LRQLDLSRNQFKQLPSGLF 439
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 43/145 (29%), Positives = 70/145 (48%)
Query: 127 LDVIPITLNPS---IQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQ 182
L V+P L + +Q L L NR+ + D+ L+ + L NQL +I
Sbjct: 311 LSVLPFMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSL 370
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
+L +L L+ N LS ++ K F L L LN+ GN L L +F L L +LDL +N+
Sbjct: 371 RELRQLDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQ 430
Query: 243 ISRIDQACFEGLTALRILYLDDNQL 267
++ F+ +L +L +D+ +
Sbjct: 431 FKQLPSGLFQRQRSLVLLRIDETPI 455
Score = 130 (50.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 188 LQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID 247
L+++ N+LS+ + +K L+ L+L + L LP R LS L L+L QN ++ +
Sbjct: 232 LEMSGNRLSNCSLLNLQYMKQLQELHLDRSELTYLPQRFLGELSELRMLNLSQNLLTELP 291
Query: 248 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 307
+ F G L LYL N+L +P F L L + N + D F G+L
Sbjct: 292 RDIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQ 351
Query: 308 LDLRGAGLTNMMGHSM 323
L L+ L ++ HS+
Sbjct: 352 LHLQRNQLKSIGKHSL 367
>UNIPROTKB|Q9H3W5 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030131
HOGENOM:HOG000252914 HOVERGEN:HBG052361 EMBL:AF134481 EMBL:AB060967
EMBL:AY358280 EMBL:CR457397 EMBL:AL442092 EMBL:BC035133
IPI:IPI00465126 RefSeq:NP_001093128.1 RefSeq:NP_001093130.1
RefSeq:NP_060804.3 UniGene:Hs.3781 ProteinModelPortal:Q9H3W5
SMR:Q9H3W5 STRING:Q9H3W5 DMDM:74761421 PRIDE:Q9H3W5 DNASU:54674
Ensembl:ENST00000308478 Ensembl:ENST00000422987
Ensembl:ENST00000451085 GeneID:54674 KEGG:hsa:54674 UCSC:uc003vfs.4
CTD:54674 GeneCards:GC07P110731 HGNC:HGNC:17200 neXtProt:NX_Q9H3W5
PharmGKB:PA30468 InParanoid:Q9H3W5 OMA:RWINMNK OrthoDB:EOG4MGS6W
PhylomeDB:Q9H3W5 GenomeRNAi:54674 NextBio:57220 ArrayExpress:Q9H3W5
Bgee:Q9H3W5 CleanEx:HS_LRRN3 Genevestigator:Q9H3W5 Uniprot:Q9H3W5
Length = 708
Score = 189 (71.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 55/194 (28%), Positives = 91/194 (46%)
Query: 116 ETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIP 175
E V C + L P L + Q L+L+ N I ++ + F +L +DLS N L ++
Sbjct: 49 EASTVDCNDLGLLTFPARLPANTQILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSSVT 108
Query: 176 IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEE 235
+ +L+ + L NKL+ + K L +L+ L + N L + F L +L
Sbjct: 109 NINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLR 168
Query: 236 LDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTL 294
L L NR+ I+ F+ L L IL + +N + + +F L L L + G+N+ T +
Sbjct: 169 LHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINL-TEI 227
Query: 295 ADGAFNGLGRLSAL 308
D A GL L ++
Sbjct: 228 PDNALVGLENLESI 241
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 52/171 (30%), Positives = 80/171 (46%)
Query: 141 LVLKYNRIKTVDSA-IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L N + +V + ++ L V L N+L +P + L EL +NHN LS+++
Sbjct: 97 LDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTIS 156
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
FIGL +L L+L N L+ + + F L +LE L +G+N I RI F+ L LR
Sbjct: 157 PGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRS 216
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L + L +P + + L L + N + A + L LDL
Sbjct: 217 LVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDL 267
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 45/139 (32%), Positives = 70/139 (50%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L L L+ N LSSV N + L + L N L +LP++ + LS+L+EL + N +S
Sbjct: 94 LTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLS 153
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
I F GL L L+L+ N+L+ + + F L L L +G N + D F L
Sbjct: 154 TISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLIN 213
Query: 305 LSALDLRGAGLTNMMGHSM 323
L +L + G LT + +++
Sbjct: 214 LRSLVIAGINLTEIPDNAL 232
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 49/184 (26%), Positives = 85/184 (46%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P + + L+ N++ + + + S+LQ + ++HN L I F L+ L LN N+
Sbjct: 116 PQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNR 175
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L +N+K F L +L++L + N + + D F PL +L L + ++ I GL
Sbjct: 176 LQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGL 235
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 314
L + DN+L VP + + L L + N + G F+ + L L+ G
Sbjct: 236 ENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNM-----LHLKELG 290
Query: 315 LTNM 318
+ NM
Sbjct: 291 INNM 294
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 189 (71.6 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 55/175 (31%), Positives = 82/175 (46%)
Query: 137 SIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
++ L L N + D + S L + L NQ+V +P + L EL +NHN++
Sbjct: 97 NLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQI 156
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
SS+ F GL++L L+L N L+ + R F +LE L +G+N + I F+ LT
Sbjct: 157 SSIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLT 216
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR L L +L +P +F+ L L L N + A L L LDL
Sbjct: 217 NLRSLVLAGMELTDIPGNAFVGLDNLESLSFYDNKLVRVPQTALQKLPNLKFLDL 271
Score = 182 (69.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 54/191 (28%), Positives = 94/191 (49%)
Query: 125 ANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQE 183
+N+ I +T + L L+ N+I + D ++Q ++LQ + ++HNQ+ +I F
Sbjct: 109 SNIRDIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLR 168
Query: 184 KLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRI 243
L+ L LN N+L +++++ F +L++L + N + + D F PL++L L L +
Sbjct: 169 NLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMEL 228
Query: 244 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 303
+ I F GL L L DN+L VP + L L L + N + +G F +
Sbjct: 229 TDIPGNAFVGLDNLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHKIQEGDFKNML 288
Query: 304 RLSALDLRGAG 314
RL L + G
Sbjct: 289 RLKELGINNMG 299
Score = 181 (68.8 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 55/193 (28%), Positives = 85/193 (44%)
Query: 116 ETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIP 175
E V C + +L IP L+ Q L+L+ N I ++ +L +DLS N NI
Sbjct: 53 EATTVDCNDLHLTRIPGNLSADTQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNIR 112
Query: 176 IRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEE 235
G +L L L N++ + + + L +L+ L + N + + FA L +L
Sbjct: 113 DIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLR 172
Query: 236 LDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 295
L L NR+ ID FE L IL + +N + + +F L L L + T +
Sbjct: 173 LHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIP 232
Query: 296 DGAFNGLGRLSAL 308
AF GL L +L
Sbjct: 233 GNAFVGLDNLESL 245
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 43/138 (31%), Positives = 71/138 (51%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L EL L+ N S++ + + L L+L N + ++PD L++L+EL + N+IS
Sbjct: 98 LTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQIS 157
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
I F GL L L+L+ N+L+++ + F L L +G N + D F L
Sbjct: 158 SIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTN 217
Query: 305 LSALDLRGAGLTNMMGHS 322
L +L L G LT++ G++
Sbjct: 218 LRSLVLAGMELTDIPGNA 235
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 35/101 (34%), Positives = 52/101 (51%)
Query: 210 KVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS 269
+VL L+ N++ + L L +L ELDL QN S I ++ L L+L++NQ+
Sbjct: 76 QVLLLQSNYIARTSEEL-EQLLNLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQIVE 134
Query: 270 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
+P S L L EL + N +++A AF GL L L L
Sbjct: 135 MPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHL 175
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 191 (72.3 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 63/211 (29%), Positives = 104/211 (49%)
Query: 109 PDCDCN-DETLVVTCKEANLDVIP---ITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQH 163
P C N LV+ + L ++P TL+ +Q L L+ NRI+ V+S I + +L+
Sbjct: 143 PGCFGNISSLLVLKINQNRLSLLPDKVFTLS-QLQVLELRRNRIRVVESLIFKELKALKS 201
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ + N + + E + EL+L +N L+ +N GL L++L + N + +
Sbjct: 202 LKMQRNGITKLMDGALFGLENMEELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGLIR 261
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
+ LEELDL N +SR++ F GL+ L+ L L DNQ+ + F L +
Sbjct: 262 ADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRT 321
Query: 284 LRVGLN-VFTTLAD--GAFNGLGRLSALDLR 311
L + N + + D G F GL RL++L L+
Sbjct: 322 LDIRNNEISLAIEDFIGMFVGLKRLNSLVLQ 352
Score = 189 (71.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 48/178 (26%), Positives = 91/178 (51%)
Query: 142 VLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
+L NR + +A++ + + H ++ N+L +P G + + L L HN++S V +
Sbjct: 39 LLDCNRKRLTAAALEAPAWVTHASINQNELTAVPFLG-DASSNITVLSLVHNRISEVVAE 97
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
+ SL+ L+L N + +L F P+ L+ L+L +N+IS ++ CF +++L +L
Sbjct: 98 QLLPYSSLESLDLSSNSISELKAGSFPPMQ-LKYLNLSKNKISSLEPGCFGNISSLLVLK 156
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMM 319
++ N+L +P F L L L + N + F L L +L ++ G+T +M
Sbjct: 157 INQNRLSLLPDKVFT-LSQLQVLELRRNRIRVVESLIFKELKALKSLKMQRNGITKLM 213
Score = 188 (71.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/215 (26%), Positives = 93/215 (43%)
Query: 107 CPPDCDCND---ETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQH 163
CP C C+ ++ C L + + + N + V S++
Sbjct: 24 CPSPCSCSGGPGAAQLLDCNRKRLTAAALEAPAWVTHASINQNELTAVPFLGDASSNITV 83
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLP 223
+ L HN++ + P L L L+ N +S + +F ++ LK LNL N + L
Sbjct: 84 LSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPMQ-LKYLNLSKNKISSLE 142
Query: 224 DRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 283
F +S L L + QNR+S + F L+ L++L L N++R V + F L L
Sbjct: 143 PGCFGNISSLLVLKINQNRLSLLPDKVFT-LSQLQVLELRRNRIRVVESLIFKELKALKS 201
Query: 284 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L++ N T L DGA GL + L+L LT +
Sbjct: 202 LKMQRNGITKLMDGALFGLENMEELELEYNNLTEL 236
Score = 173 (66.0 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 50/174 (28%), Positives = 90/174 (51%)
Query: 138 IQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
++ L L N+I +++ SSL + ++ N+L +P + F + V L+L N++
Sbjct: 128 LKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFTLSQLQV-LELRRNRIR 186
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
V + F LK+LK L ++ N + L D L ++EEL+L N ++ +++ GL
Sbjct: 187 VVESLIFKELKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTELNKGWLYGLHM 246
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LRIL ++ N + + ++ + L EL + N + L D F GL L +L+L
Sbjct: 247 LRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNL 300
Score = 167 (63.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 53/187 (28%), Positives = 94/187 (50%)
Query: 137 SIQRLVLKYNRI-KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L ++ N I K +D A+ +++ ++L +N L + L L++N N +
Sbjct: 198 ALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTELNKGWLYGLHMLRILRVNQNNI 257
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ + L+ L+L N L L D +FA LS L+ L+LG N+IS + + F L
Sbjct: 258 GLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLA 317
Query: 256 ALRILYLDDNQLRSVPTPSFI--YLGM--LAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
+R L + +N++ S+ FI ++G+ L L + N T+ AF GL L LDL
Sbjct: 318 NVRTLDIRNNEI-SLAIEDFIGMFVGLKRLNSLVLQNNKIRTITKRAFEGLMELENLDLS 376
Query: 312 GAGLTNM 318
G+ ++
Sbjct: 377 KNGIMSI 383
Score = 137 (53.3 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 49/169 (28%), Positives = 76/169 (44%)
Query: 141 LVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L + N I + + A +F L+ +DLS N L + F L L L N++S +
Sbjct: 250 LRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLG 309
Query: 200 NKTFIGLKSLKVLNLRGN----FLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
F L +++ L++R N +ED +F L L L L N+I I + FEGL
Sbjct: 310 EGVFSSLANVRTLDIRNNEISLAIEDFIG-MFVGLKRLNSLVLQNNKIRTITKRAFEGLM 368
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
L L L N + S+ +F +L + + LN + L D LG+
Sbjct: 369 ELENLDLSKNGIMSIHPDAFTHLKLKT---LDLNSSSLLCDCQLQWLGQ 414
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 188 (71.2 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 59/183 (32%), Positives = 94/183 (51%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYS--SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
S+Q L L+ NR+ + S F +L+ +DLS+N ++ I GF+ E L L L N
Sbjct: 157 SVQYLNLQRNRLTVLGSGT-FVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNN 215
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L+ V + F LKSL+ L+L N +E + F L++LE L L +RI + + F G+
Sbjct: 216 LTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGI 275
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGA 313
L+ L L N L ++ + +F L L L++ N ++ + F +G L L+L
Sbjct: 276 NNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFN 335
Query: 314 GLT 316
LT
Sbjct: 336 NLT 338
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 60/212 (28%), Positives = 97/212 (45%)
Query: 101 HQASAFCPPDCD-CNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFY 158
H+ C C C + C+ L IP S L L N I + +S +
Sbjct: 26 HKEILGCSSVCQLCTGRQ--INCRNLGLSSIPKNFPESTVFLYLTGNNISYINESELTGL 83
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
SL + L ++ ++ + + F L L LN+N + ++ F GL +L+ L L+ N
Sbjct: 84 HSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQ 143
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 278
+ +P +F L ++ L+L +NR++ + F G+ ALRIL L +N + + F +L
Sbjct: 144 VSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHL 203
Query: 279 GMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LA L +G N T + AF L L L L
Sbjct: 204 ENLACLYLGSNNLTKVPSNAFEVLKSLRRLSL 235
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 62/171 (36%), Positives = 79/171 (46%)
Query: 141 LVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNN 200
L+L + I S Q + Q ++ + L +IP + F P E V L L N +S +N
Sbjct: 22 LLLLHKEILGCSSVCQLCTGRQ-INCRNLGLSSIP-KNF-P-ESTVFLYLTGNNISYINE 77
Query: 201 KTFIGLKSLKVLNL-RGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRI 259
GL SL L L N L P + F L HL L L N I R+D F+GL LR
Sbjct: 78 SELTGLHSLVALYLDNSNILYVYP-KAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRN 136
Query: 260 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LYL NQ+ VP F L + L + N T L G F G+ L LDL
Sbjct: 137 LYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDL 187
Score = 170 (64.9 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 53/187 (28%), Positives = 94/187 (50%)
Query: 141 LVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRG-FEPQEKLVELQLNHNKLSSV 198
L L N IK +D I + +L+++ L +NQ+ +P RG F + L L N+L+ +
Sbjct: 113 LFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVP-RGVFNDLVSVQYLNLQRNRLTVL 171
Query: 199 NNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
+ TF+G+ +L++L+L N + + + F L +L L LG N ++++ FE L +LR
Sbjct: 172 GSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLR 231
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNM 318
L L N + ++ +F L L L + + + F+G+ L L L L N+
Sbjct: 232 RLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENL 291
Query: 319 MGHSMAL 325
+ +L
Sbjct: 292 NSDTFSL 298
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 39/107 (36%), Positives = 61/107 (57%)
Query: 137 SIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+++ L+LK +RI+ V ++L+H+ LSHN L N+ F + L+ L+L+ N++
Sbjct: 253 NLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRI 312
Query: 196 SSVNNKTFIGL-KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQN 241
S++N TF + SLK+LNL N L L R+ PLS L L N
Sbjct: 313 ISIDNDTFENMGASLKILNLSFNNLTALHPRVLKPLSSLIHLQANSN 359
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/134 (28%), Positives = 67/134 (50%)
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
LV L L+++ + V K F+ L+ L L L NF++ L +F L +L L L N++S
Sbjct: 86 LVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVS 145
Query: 245 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 304
+ + F L +++ L L N+L + + +F+ + L L + N +++ F L
Sbjct: 146 FVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLEN 205
Query: 305 LSALDLRGAGLTNM 318
L+ L L LT +
Sbjct: 206 LACLYLGSNNLTKV 219
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 192 (72.6 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 59/185 (31%), Positives = 91/185 (49%)
Query: 137 SIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L + YN + ++ S A L+ + L N L +P E+L+ L L+ N+L
Sbjct: 260 SLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQL 319
Query: 196 SS--VNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+S V+N TF GL L VLNL N L + + F L L+ LD+ N I I++ F
Sbjct: 320 TSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLP 379
Query: 254 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L L L L +N+L ++ F L +L +L + N+ + + AF L LDL
Sbjct: 380 LYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSN 439
Query: 314 GLTNM 318
LT +
Sbjct: 440 QLTEV 444
Score = 191 (72.3 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 58/177 (32%), Positives = 81/177 (45%)
Query: 148 IKTVDSAIQFYSSLQHVDLSHNQLVNIPIR-GFEPQEKLVELQLNHNKLSSVNNKTFIGL 206
+ + A+ S LQ +D+S N+L ++P G +L L L HN +S++ GL
Sbjct: 199 LSNANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGL 258
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
SL+VLN+ N L LP FA L EL L N + + + L L +L L NQ
Sbjct: 259 SSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQ 318
Query: 267 LRS--VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGH 321
L S V +F L L L + N T + F L L LD+R N +GH
Sbjct: 319 LTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRN----NSIGH 371
Score = 183 (69.5 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 59/197 (29%), Positives = 98/197 (49%)
Query: 138 IQRLVLKYNRIKTVDSA--IQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
+Q L ++ N I ++ + Y+ L ++L+ N+L + R F L +L LN+N +
Sbjct: 359 LQILDMRNNSIGHIEEGAFLPLYN-LHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLV 417
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
S V ++ F LK L+L N L ++P+ + LS L+ LDLG+N+IS F L
Sbjct: 418 SIVESQAFRNCSDLKELDLSSNQLTEVPEAV-QDLSMLKTLDLGENQISEFKNNTFRNLN 476
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
L L L DN++ ++ F L L+ L + N ++ GAF+ + A+ L L
Sbjct: 477 QLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFL 536
Query: 316 TNMMGHSMALGDYLHWI 332
T++ G L L W+
Sbjct: 537 TDINGIFATLASLL-WL 552
Score = 182 (69.1 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 54/179 (30%), Positives = 90/179 (50%)
Query: 135 NPSIQRLVLKYNRIKTVDSAIQF-YSSLQHVDLSHNQLVNIPIRG--FEPQEKLVELQLN 191
N ++ L L+ N + + + L +DLS NQL + + F +L+ L L+
Sbjct: 282 NKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLS 341
Query: 192 HNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACF 251
+N L+ + +KTF L L++L++R N + + + F PL +L L+L +NR+ +D F
Sbjct: 342 NNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIF 401
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
GL L L L++N + V + +F L EL + N T + + A L L LDL
Sbjct: 402 NGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPE-AVQDLSMLKTLDL 459
Score = 168 (64.2 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 55/176 (31%), Positives = 80/176 (45%)
Query: 138 IQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+ +L L N + V+S A + S L+ +DLS NQL +P + L L L N++S
Sbjct: 407 LTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVP-EAVQDLSMLKTLDLGENQIS 465
Query: 197 SVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA 256
N TF L L L L N + ++ +F L L L+L +NRI I++ F+ T
Sbjct: 466 EFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQDLPRLSVLNLAKNRIQSIERGAFDKNTE 525
Query: 257 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
+ + LD N L + F L L L + N D AF L LD+ G
Sbjct: 526 IEAIRLDKNFLTDI-NGIFATLASLLWLNLSENHLVWF-DYAFIP-SNLKWLDIHG 578
Score = 141 (54.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
L N + + + + L L LN + L ++ N + L +L+VL+L N L L
Sbjct: 799 LDGNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGT 858
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L EL L N ++ I A FE L +L +L LD+N+L S+P Y L L
Sbjct: 859 EFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLP--HLQYRHSLQGLT 916
Query: 286 VGLNVFT 292
+G N ++
Sbjct: 917 LGRNAWS 923
Score = 126 (49.4 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 39/150 (26%), Positives = 67/150 (44%)
Query: 102 QASAFCPPDCDC-NDETL---VVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSA-IQ 156
+ CP +C C +D T +V C +L +P + + L L N + ++ +
Sbjct: 754 ECEVICPGNCSCFHDATWATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLT 813
Query: 157 FYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRG 216
+L+ + L+ + L+ + L L L +NKL+++ F L L+ L L
Sbjct: 814 GRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHN 873
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQNRISRI 246
N L + + F PL LE L L NR+S +
Sbjct: 874 NMLTHISNATFEPLVSLEVLRLDNNRLSSL 903
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 179 FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLR--------GNFLEDLPDRLFAPL 230
F +KL EL+++ KL V F GL SLK L L G LE L + F L
Sbjct: 86 FRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLE-LHGQSFQGL 144
Query: 231 SHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 290
L EL LG N I ++ + + + +L++L L N++RS +LG +L G +
Sbjct: 145 KELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAE-----FLGFSEKLCAGSAL 199
Query: 291 FTTLADGAFNGLGRLSALDL 310
A+GA +G L LD+
Sbjct: 200 SN--ANGAVSGGSELQTLDV 217
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 53/186 (28%), Positives = 82/186 (44%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
PS+Q L L NRI++ + + F L N N + G +L L ++ N+L
Sbjct: 169 PSLQLLNLTQNRIRSAEF-LGFSEKLCAGSALSN--ANGAVSG---GSELQTLDVSFNEL 222
Query: 196 SSVNNKTFIG-LKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
S+ + L+ L+ L+L+ N + L A LS L L++ N + + F G
Sbjct: 223 RSLPDAWGASRLRRLQTLSLQHNNISTLAPNALAGLSSLRVLNISYNHLVSLPSEAFAGN 282
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT--LADGAFNGLGRLSALDLRG 312
LR L+L N L +P L L L + N T+ + + F GL RL L+L
Sbjct: 283 KELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSN 342
Query: 313 AGLTNM 318
LT +
Sbjct: 343 NALTRI 348
Score = 39 (18.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 5/7 (71%), Positives = 5/7 (71%)
Query: 107 CPPDCDC 113
CPP C C
Sbjct: 741 CPPTCHC 747
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 192 (72.6 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 43/135 (31%), Positives = 72/135 (53%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDL 166
CP +C C D VV C +L +P + ++ L L N+ V + + + LQ VDL
Sbjct: 596 CPQECACLDT--VVRCSNKHLQTLPKGIPKNVTELYLDGNQFTLVPAQLSTFKYLQLVDL 653
Query: 167 SHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRL 226
S+N++ ++ F +L L L++N L + F GL+SL++L+L GN + L + +
Sbjct: 654 SNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFQGLRSLRLLSLHGNDISTLQEGI 713
Query: 227 FAPLSHLEELDLGQN 241
FA ++ L L +G N
Sbjct: 714 FADVTSLSHLAIGAN 728
Score = 185 (70.2 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 50/164 (30%), Positives = 81/164 (49%)
Query: 103 ASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSL 161
+S CP C C++ +V C+ L IP L ++ + L+ N IK++ A Y L
Sbjct: 140 SSGSCPAMCACSNG--IVDCRGKGLTAIPANLPEAMTEIRLELNGIKSIPPGAFSPYRKL 197
Query: 162 QHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLED 221
+ +DLS+NQ+ I F+ L L L NK++ + F GL +L++L L N +
Sbjct: 198 RRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPQGVFGGLFTLQLLLLNANKINC 257
Query: 222 LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
+ F L +L L L N+I + + F L A++ L+L N
Sbjct: 258 IRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 301
Score = 174 (66.3 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 49/158 (31%), Positives = 76/158 (48%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQF--YSSLQHV 164
CP C C E +V C L IP + + L L N I +++ F + L+ +
Sbjct: 375 CPHKCRC--EASMVECSSLKLTKIPERVPQATAELRLNNNEISILEATGMFKKLTHLKKI 432
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
+LS+N++ I FE + EL L N+L S+ + F GL+ L+ L LR N + + +
Sbjct: 433 NLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIHN 492
Query: 225 RLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYL 262
F L ++ L L N+I+ I F+ L AL L L
Sbjct: 493 DSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNL 530
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 44/132 (33%), Positives = 70/132 (53%)
Query: 160 SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFL 219
++ + L N + +IP F P KL + L++N++S + F GL+SL L L GN +
Sbjct: 172 AMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKI 231
Query: 220 EDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 279
DLP +F L L+ L L N+I+ I F+ L L +L L DN+++S+ +F L
Sbjct: 232 TDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 291
Query: 280 MLAELRVGLNVF 291
+ L + N F
Sbjct: 292 AIQTLHLAQNPF 303
Score = 168 (64.2 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 56/167 (33%), Positives = 82/167 (49%)
Query: 164 VDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN-NKTFIGLKSLKVLNLRGNFLEDL 222
V+ S +L IP R PQ EL+LN+N++S + F L LK +NL N + ++
Sbjct: 386 VECSSLKLTKIPER--VPQAT-AELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEI 442
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
D F + + EL L N++ I F GL LR L L +N++ + SF L +
Sbjct: 443 EDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVR 502
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDYL 329
L + N T++ GAF+ L LS L+L A N LGD+L
Sbjct: 503 LLSLYDNQIATISPGAFDTLQALSTLNLL-ANPFNCNCQLAWLGDWL 548
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 36/128 (28%), Positives = 62/128 (48%)
Query: 183 EKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNR 242
E + E++L N + S+ F + L+ ++L N + ++ F L L L L N+
Sbjct: 171 EAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNK 230
Query: 243 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 302
I+ + Q F GL L++L L+ N++ + +F L L+ L + N +LA G F L
Sbjct: 231 ITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSL 290
Query: 303 GRLSALDL 310
+ L L
Sbjct: 291 RAIQTLHL 298
Score = 107 (42.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/107 (31%), Positives = 55/107 (51%)
Query: 207 KSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQ 266
K++ L L GN +P +L + +L+ +DL N+IS + + F ++ L L L N
Sbjct: 623 KNVTELYLDGNQFTLVPAQL-STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNS 681
Query: 267 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ +P +F L L L + N +TL +G F + LS L + GA
Sbjct: 682 LQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAI-GA 727
Score = 97 (39.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 165 DLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPD 224
DLS N + IP + F L LQL+ N++ + F L+ L+VL L N + +P
Sbjct: 1 DLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPV 60
Query: 225 RLFAPLSHLEELDLGQNRI 243
F + L L N +
Sbjct: 61 SSFNHMPKLRTFRLHSNHL 79
Score = 71 (30.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 252 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
E +T +R L+ N ++S+P +F L + + N + +A AF GL L++L L
Sbjct: 171 EAMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY 227
Query: 312 GAGLTNM 318
G +T++
Sbjct: 228 GNKITDL 234
Score = 66 (28.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 143 LKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L N I+ + A + + L+++ L NQ+ I F L L LN+N ++++
Sbjct: 2 LSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPVS 61
Query: 202 TFIGLKSLKVLNLRGNFL 219
+F + L+ L N L
Sbjct: 62 SFNHMPKLRTFRLHSNHL 79
>UNIPROTKB|C9JYU3 [details] [associations]
symbol:LRRC32 "Leucine-rich repeat-containing protein 32"
species:9606 "Homo sapiens" [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] GO:GO:0010628
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0046007
GO:GO:0050710 HGNC:HGNC:4161 ChiTaRS:LRRC32 HOGENOM:HOG000001578
EMBL:AP001189 IPI:IPI00794430 ProteinModelPortal:C9JYU3 SMR:C9JYU3
STRING:C9JYU3 PRIDE:C9JYU3 Ensembl:ENST00000421973
ArrayExpress:C9JYU3 Bgee:C9JYU3 Uniprot:C9JYU3
Length = 186
Score = 165 (63.1 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 49/153 (32%), Positives = 79/153 (51%)
Query: 120 VTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRG 178
V+C+ L +P L P + L L N+++++ S + FY++L+H+DLS N++ +
Sbjct: 33 VSCQVLGLLQVPSVLPPDTETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGA 92
Query: 179 FEPQEKLVELQLNHNKLSSVNNKTFIGLKSL-KV--LNLRGNFL-EDLPDRLFAPLSHLE 234
F+ L L L HN+L+ + GL L +V L+L GN L L +RL L
Sbjct: 93 FQALTHLEHLSLAHNRLAMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPSLH 152
Query: 235 ELDLGQNRISRIDQACFEGLTALRILYLDDNQL 267
L L +N ++R+ + F + AL L L N L
Sbjct: 153 TLSLAENSLTRLTRHTFRDMPALEQLDLHSNVL 185
>UNIPROTKB|F1SUL2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:CU915508
RefSeq:XP_003129719.1 UniGene:Ssc.93908 Ensembl:ENSSSCT00000016222
GeneID:100522452 KEGG:ssc:100522452 Uniprot:F1SUL2
Length = 663
Score = 188 (71.2 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 64/189 (33%), Positives = 95/189 (50%)
Query: 141 LVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVN 199
L L YN I+ V + ++ +SL+ ++LS N L G L+ L ++HN L +
Sbjct: 321 LDLSYNEIELVPEGFLEHLTSLRFLNLSRNCLQAFRAWGAGSLPCLMRLDISHNALEKLE 380
Query: 200 NKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRID-------QAC-- 250
L SL+ L L+ N L DLP FA L+ L+ L+L NRIS C
Sbjct: 381 LGAG-ALGSLRTLLLQDNALWDLPPYAFASLASLQRLNLQGNRISPCGGPGEPGPSGCVA 439
Query: 251 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL-GRLSALD 309
F G+++LR L L DN++ ++ +F++ L EL + N +A GA GL G L L
Sbjct: 440 FSGISSLRFLNLVDNKVETLRAGAFLHTP-LTELDLSANPGLDVATGALAGLEGSLEVLA 498
Query: 310 LRGAGLTNM 318
L+G GL +
Sbjct: 499 LQGNGLATL 507
Score = 183 (69.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 61/203 (30%), Positives = 96/203 (47%)
Query: 113 CNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQL 171
C +C+ L +P L I+ L L N+++++ S + FY +L+ +DLS N++
Sbjct: 27 CKKVDKEASCQGLGLLQVPSMLARDIEALDLSGNQLRSIPASPLGFYVALRRLDLSANEI 86
Query: 172 VNIPIRGFEPQEKLVELQLNHNKLSS--VNNKTFIG-LKSLKVLNLRGNFL-EDLPDRLF 227
++ F+ L L L HN+L+ +G L L L+L GN L L ++L
Sbjct: 87 SSLQPGAFQALPHLEHLNLAHNRLAQGMALGAGGLGPLPHLTALDLSGNSLYSGLAEQLL 146
Query: 228 APLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 287
L L L +N ++R+ + F G AL L L N L + +F L LA L +
Sbjct: 147 GEAPALRTLSLAENSLTRLARHTFRGAPALEWLDLHSNVLMDIEDGAFEALPRLAHLNLS 206
Query: 288 LNVFTTLADGAFNGLGRLSALDL 310
N T ++D F L +L LDL
Sbjct: 207 RNSLTCISD--FR-LQQLRVLDL 226
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 55/160 (34%), Positives = 74/160 (46%)
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
++ +DLS NQL +IP L L L+ N++SS+ F L L+ LNL N L
Sbjct: 52 IEALDLSGNQLRSIPASPLGFYVALRRLDLSANEISSLQPGAFQALPHLEHLNLAHNRLA 111
Query: 221 D---LPDRLFAPLSHLEELDLGQNRI-SRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 276
L PL HL LDL N + S + + ALR L L +N L + +F
Sbjct: 112 QGMALGAGGLGPLPHLTALDLSGNSLYSGLAEQLLGEAPALRTLSLAENSLTRLARHTFR 171
Query: 277 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 316
L L + NV + DGAF L RL+ L+L LT
Sbjct: 172 GAPALEWLDLHSNVLMDIEDGAFEALPRLAHLNLSRNSLT 211
>UNIPROTKB|F1NKM7 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:AYGKAPS EMBL:AADN02063998 EMBL:AADN02063999 IPI:IPI00591161
ProteinModelPortal:F1NKM7 Ensembl:ENSGALT00000000792 Uniprot:F1NKM7
Length = 811
Score = 189 (71.6 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 46/122 (37%), Positives = 66/122 (54%)
Query: 189 QLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQ 248
+L+ N++SS+ + F GL SLK+L L+ N L +P L +L+ L L N IS + +
Sbjct: 1 RLSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPE 60
Query: 249 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
FEGL +LR L+LDDN L +P + L L + + LN + D AF L L L
Sbjct: 61 ESFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVL 120
Query: 309 DL 310
L
Sbjct: 121 HL 122
Score = 174 (66.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 54/167 (32%), Positives = 83/167 (49%)
Query: 143 LKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L N+I ++ A SL+ + L +NQL IP L L+L+ N +S V +
Sbjct: 2 LSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEE 61
Query: 202 TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILY 261
+F GL+SL+ L L N L ++P R L L+ + L N+I RI F+ L++L +L+
Sbjct: 62 SFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLH 121
Query: 262 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 308
L +N+++ + F L L L + N GA LGRL L
Sbjct: 122 LHNNRIQRLGANGFDGLHNLETLDLNYNELLEFP-GAIRTLGRLQEL 167
Score = 171 (65.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 53/179 (29%), Positives = 83/179 (46%)
Query: 136 PSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P++Q L L N I V + + + SL+H+ L N L IP+R L + L N+
Sbjct: 43 PNLQSLRLDANLISVVPEESFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQ 102
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
+ + + F L SL VL+L N ++ L F L +LE LDL N + A L
Sbjct: 103 IWRIPDYAFQNLSSLVVLHLHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPGA-IRTL 161
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
L+ L +N ++++P +F+ +L + N + AF L +L L L GA
Sbjct: 162 GRLQELGFHNNNIKAIPENAFVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLNGA 220
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/161 (31%), Positives = 70/161 (43%)
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
LS NQ+ +IP F L L L +N+LS + + L +L+ L L N + +P+
Sbjct: 2 LSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEE 61
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 285
F L L L L N ++ I L AL+ + L NQ+ +P +F L L L
Sbjct: 62 SFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLH 121
Query: 286 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALG 326
+ N L F+GL L LDL L G LG
Sbjct: 122 LHNNRIQRLGANGFDGLHNLETLDLNYNELLEFPGAIRTLG 162
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/191 (28%), Positives = 90/191 (47%)
Query: 137 SIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
S++ L L I+ + A+ Q +L+ ++LSHN++ ++P F ++L EL L HN++
Sbjct: 234 SLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLP--SFHRCQRLEELGLQHNRI 291
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
+ TF+ L +L+ ++L N + + F L L +LDL NR++ + GL
Sbjct: 292 HEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLSDNRLAALPLG---GLG 348
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS-ALDLRGAG 314
+L L L N S P + L L V + A G+ +G R S + GA
Sbjct: 349 SLTHLKLQGNPALSEPFAEDSF-PKLRVLEVPY-AYQCCAYGSCSGFFRASNQWEAEGAS 406
Query: 315 LTNMMGHSMAL 325
+ H AL
Sbjct: 407 PEDEDPHRRAL 417
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 47/175 (26%), Positives = 73/175 (41%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+++ L L YN + AI+ LQ + +N + IP F L + N +
Sbjct: 140 NLETLDLNYNELLEFPGAIRTLGRLQELGFHNNNIKAIPENAFVGNPLLQTIHFYDNPIQ 199
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L L+L G + + PD + LE L L + I + +A + L
Sbjct: 200 FVGQSAFQYLPKLHTLSLNGATDIREFPD--LKGTTSLEVLTLTRAGIRLLPRAVCQQLP 257
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
LR+L L N++ +P SF L EL + N + F L L ++DL
Sbjct: 258 NLRVLELSHNKIEDLP--SFHRCQRLEELGLQHNRIHEIRADTFVQLTALRSIDL 310
>UNIPROTKB|J3KS54 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR003591 SMART:SM00369
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 EMBL:AC127537 HGNC:HGNC:3750
ChiTaRS:FLII ProteinModelPortal:J3KS54 Ensembl:ENST00000578558
Uniprot:J3KS54
Length = 700
Score = 188 (71.2 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 59/198 (29%), Positives = 96/198 (48%)
Query: 136 PSIQRLVLKYNRIKT--VDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHN 193
PS++ +V + N +K V I L +DLSHNQL P R E + ++ L L+HN
Sbjct: 79 PSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTECP-RELENAKNMLVLNLSHN 137
Query: 194 KLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
+ ++ N+ FI L L L+L N LE LP ++ L HL+ L L N +
Sbjct: 138 SIDTIPNQLFINLTDLLYLDLSENRLESLPPQM-RRLVHLQTLVLNGNPLLHAQLRQLPA 196
Query: 254 LTALRILYLDDNQLRSVPTPSFIY-LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 312
+TAL+ L+L Q P+ + L LA++ + N T + + + L L L+L
Sbjct: 197 MTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYT-LPSLRRLNLSS 255
Query: 313 AGLTNMMGHSMALGDYLH 330
+T + S+ + ++H
Sbjct: 256 NQITEL---SLCIDQWVH 270
Score = 153 (58.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 56/213 (26%), Positives = 100/213 (46%)
Query: 101 HQASAFCPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLV---LKYNRIKTVDSAIQF 157
H CP + + LV+ ++D IP L ++ L+ L NR++++ ++
Sbjct: 113 HNQLTECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLDLSENRLESLPPQMRR 172
Query: 158 YSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFI-GLKSLKVLNLRG 216
LQ + L+ N L++ +R L L L + + N T + GL +L ++L
Sbjct: 173 LVHLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSC 232
Query: 217 NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 276
N L +P+ L+ L L L+L N+I+ + C + + L L NQL S+P+ +
Sbjct: 233 NDLTRVPECLYT-LPSLRRLNLSSNQITELS-LCIDQWVHVETLNLSRNQLTSLPS-AIC 289
Query: 277 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 309
L L +L + N DG +G+G+L+ L+
Sbjct: 290 KLSKLKKLYLNSNKLDF--DGLPSGIGKLTNLE 320
Score = 129 (50.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 52/167 (31%), Positives = 79/167 (47%)
Query: 110 DCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHN 169
D CND T V C TL PS++RL L N+I + I + ++ ++LS N
Sbjct: 229 DLSCNDLTRVPECL--------YTL-PSLRRLNLSSNQITELSLCIDQWVHVETLNLSRN 279
Query: 170 QLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIG-LKSLKVLNLRGNFLEDLPDRLFA 228
QL ++P KL +L LN NKL + IG L +L+ N LE +P+ L
Sbjct: 280 QLTSLP-SAICKLSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMAANNNLELVPESL-C 337
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN-QLRSVPTPS 274
L +L L +N + + +A LT + +L + +N L P P+
Sbjct: 338 RCPKLRKLVLNKNHLVTLPEA-IHFLTEIEVLDVRENPNLVMPPKPA 383
>WB|WBGene00008093 [details] [associations]
symbol:lron-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GeneTree:ENSGT00700000104056 eggNOG:KOG0619
EMBL:Z79598 RefSeq:NP_510424.4 ProteinModelPortal:Q93377 SMR:Q93377
EnsemblMetazoa:C44H4.1 GeneID:181553 KEGG:cel:CELE_C44H4.1
UCSC:C44H4.1 CTD:181553 WormBase:C44H4.1 HOGENOM:HOG000018355
InParanoid:Q93377 OMA:TDSKLPH NextBio:914416 Uniprot:Q93377
Length = 607
Score = 187 (70.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 51/181 (28%), Positives = 93/181 (51%)
Query: 134 LNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVDLSHNQLVNIPIRGF---EPQEKLVELQ 189
L S++ L ++ N I + S + L+ + L N + + F ++ L++L
Sbjct: 106 LENSLEELEIRGNYIDGIPQSGVSILKQLKILSLPDNLIEYVQDNAFLSYHSRDSLLKLD 165
Query: 190 LNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQA 249
L+ N L++++ +GL++L L+L N L ++P + + LE+L LG NRI I +
Sbjct: 166 LSANNLTAIHPTGLLGLENLSQLSLDKNLLSEIPSQALENIPSLEDLSLGVNRIHTISRN 225
Query: 250 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 309
L L+ L L+ NQ+R +P+ SF +L+ L +G N+ T++ F +G L L
Sbjct: 226 SLP-LPNLKSLSLEVNQIRLIPSDSFSETPLLSYLYLGNNLLTSIDASMFLHIGGLKVLS 284
Query: 310 L 310
+
Sbjct: 285 M 285
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 55/201 (27%), Positives = 92/201 (45%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
PS++ L L NRI T+ +L+ + L NQ+ IP F L L L +N L
Sbjct: 207 PSLEDLSLGVNRIHTISRNSLPLPNLKSLSLEVNQIRLIPSDSFSETPLLSYLYLGNNLL 266
Query: 196 SSVNNKTFIGLKSLKVLNLRGNFLEDLPD-----RL-------------FAPLSHLEELD 237
+S++ F+ + LKVL++ N +D+ +L F L L+
Sbjct: 267 TSIDASMFLHIGGLKVLSMSNN--KDITSIQANGKLSVQQFKLCICILAFQHAPSLIRLE 324
Query: 238 LGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 297
L ISRI+ + + ++++ L NQ+ + +F L L+EL + N + D
Sbjct: 325 LFDCSISRIEPKSLQKVQHIQVILLSRNQITRISHDTFSNLPELSELDLSGNSINAVDDF 384
Query: 298 AFNGLGRLSALDLRGAGLTNM 318
AF+ L L++LDL L ++
Sbjct: 385 AFSQLPMLTSLDLSSNRLESL 405
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 193 (73.0 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 53/180 (29%), Positives = 91/180 (50%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
+I+ + + N +KTV S+L ++L+ NQ+ +IP + F L +L+L +N +
Sbjct: 105 TIEHITINGNELKTVP-VFGNLSTLMSMNLNSNQISSIPDKAFNGLSALTQLRLENNAIC 163
Query: 197 SVNNKTFIGLK-SLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
K+ +K SL +L++ GN L+ +P ++ ++L LDLG N IS I+ L
Sbjct: 164 DFPPKSLDAVKASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLP 223
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 315
LR L + +N LR + +F+ + L L + N+ +TL G L LD+ L
Sbjct: 224 FLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNAL 283
Score = 191 (72.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 46/141 (32%), Positives = 79/141 (56%)
Query: 136 PSIQRLVLKYNRIKTVDS-AIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P+++++ + N I +++ A +LQ + + +N +V I FE +KLV L + +N
Sbjct: 293 PNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNS 352
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
L+ + F G+K+L+ L++R N L L FA L+HL LDLG N+I I++ F+ L
Sbjct: 353 LAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKL 412
Query: 255 TALRILYLDDNQLRSVPTPSF 275
+ L L L +N++ T F
Sbjct: 413 SKLFWLDLSNNKISGFKTSVF 433
Score = 187 (70.9 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 47/176 (26%), Positives = 95/176 (53%)
Query: 136 PSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNK 194
P +Q L L+ N I T+D + +Q + +L+ +D+S+N L +P + L +++++ N
Sbjct: 247 PQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALYALP--SLKDLPNLKQVRVDGNL 304
Query: 195 LSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGL 254
++ + F +L++++++ N + + F L L L +G N +++I++ F+G+
Sbjct: 305 ITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGM 364
Query: 255 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L+ L + +N L ++ SF L L L +G N + +G F+ L +L LDL
Sbjct: 365 KNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDL 420
Score = 168 (64.2 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 58/227 (25%), Positives = 104/227 (45%)
Query: 113 CNDE---TLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV---DSAIQFYS------- 159
CN E T+ T + +D + I ++ L +N ++T+ +S +Q +S
Sbjct: 43 CNGEDVKTIAQTVGTSQIDELHILNGTDVKIESLPFNGLRTIAILNSTLQSFSPTAWRHV 102
Query: 160 --SLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGN 217
+++H+ ++ N+L +P+ F L+ + LN N++SS+ +K F GL +L L L N
Sbjct: 103 EATIEHITINGNELKTVPV--FGNLSTLMSMNLNSNQISSIPDKAFNGLSALTQLRLENN 160
Query: 218 FLEDLPDR-LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 276
+ D P + L A + L LD+ N + I L L L N + + +
Sbjct: 161 AICDFPPKSLDAVKASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELM 220
Query: 277 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSM 323
L L ELRV N + AF + +L L L+ ++ + G+ +
Sbjct: 221 NLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRL 267
Score = 167 (63.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 61/224 (27%), Positives = 102/224 (45%)
Query: 106 FCPPDCDCNDETLVVTCKEAN-LDVIP--ITLNPS-IQRLVLKYNRIKTVDS-AIQFYSS 160
F P D +LV+ N LD IP I N + + L L N I +++ +
Sbjct: 165 FPPKSLDAVKASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPF 224
Query: 161 LQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLE 220
L+ + + +N L I F +L L L N +S+++ G K+L+VL++ N L
Sbjct: 225 LRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALY 284
Query: 221 DLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 280
LP L +L+++ + N I++I+ F L+++ + +N + + SF L
Sbjct: 285 ALPS--LKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDK 342
Query: 281 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L L VG N + G F+G+ L L +R LT + S A
Sbjct: 343 LVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFA 386
Score = 141 (54.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 149 KTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKS 208
K++D A++ +SL +D+S N L IP + L+ L L N +S +NN + L
Sbjct: 168 KSLD-AVK--ASLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPF 224
Query: 209 LKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLR 268
L+ L ++ N L + F + L+ L L N IS +D +G L +L + +N L
Sbjct: 225 LRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALY 284
Query: 269 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMALGDY 328
++P S L L ++RV N+ T + AF+ L + ++ + + +S D
Sbjct: 285 ALP--SLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDK 342
Query: 329 L 329
L
Sbjct: 343 L 343
Score = 133 (51.9 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 41/143 (28%), Positives = 75/143 (52%)
Query: 127 LDVIPITLNPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSHNQLVNIPIRG-FEPQEK 184
++ + + NP++Q + ++ N I + ++ + L + + +N L I RG F+ +
Sbjct: 308 IETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIE-RGMFDGMKN 366
Query: 185 LVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRIS 244
L +L + +N L++++ +F L L L+L N + D+ + F LS L LDL N+IS
Sbjct: 367 LQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKIS 426
Query: 245 RIDQACFEGLTALRILYLDDNQL 267
+ F+ + IL LD NQL
Sbjct: 427 GFKTSVFKKKIS-NIL-LDGNQL 447
Score = 126 (49.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 58/231 (25%), Positives = 104/231 (45%)
Query: 103 ASAFCP--PD-CDC--NDETLVVTCKEANLDVIPITLNPS-IQRL-VLKYNRIKTVDSAI 155
A CP P+ CDC + ++++C ++ I T+ S I L +L +K ++S +
Sbjct: 19 AEITCPRIPEKCDCKISKSMIILSCNGEDVKTIAQTVGTSQIDELHILNGTDVK-IES-L 76
Query: 156 QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVE-LQLNHNKLSSVNNKTFIGLKSLKVLNL 214
F + L+ + + ++ L + + E +E + +N N+L +V F L +L +NL
Sbjct: 77 PF-NGLRTIAILNSTLQSFSPTAWRHVEATIEHITINGNELKTV--PVFGNLSTLMSMNL 133
Query: 215 RGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTA-LRILYLDDNQLRSVPTP 273
N + +PD+ F LS L +L L N I + + A L +L + N L ++P
Sbjct: 134 NSNQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLLDVSGNCLDAIPAQ 193
Query: 274 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNMMGHSMA 324
L L +G N + + + L L L ++ L + H MA
Sbjct: 194 ILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRI--HPMA 242
Score = 38 (18.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 21 WIDILDVTYILYKLHPGFQNNPKSNFKSPTEILKSLLII 59
W+ ++ V +++ L P+ K +I KS++I+
Sbjct: 3 WLTLIAVAHLIAFLSSAEITCPRIPEKCDCKISKSMIIL 41
>UNIPROTKB|Q9GKN8 [details] [associations]
symbol:PRELP "Prolargin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027216
PROSITE:PS51450 GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000234447 HOVERGEN:HBG108061
EMBL:AF163568 IPI:IPI00710385 RefSeq:NP_776859.1 UniGene:Bt.3202
ProteinModelPortal:Q9GKN8 STRING:Q9GKN8 PRIDE:Q9GKN8 GeneID:282000
KEGG:bta:282000 CTD:5549 InParanoid:Q9GKN8 KO:K08125
OrthoDB:EOG44F69H NextBio:20805868 PANTHER:PTHR24371:SF15
Uniprot:Q9GKN8
Length = 381
Score = 183 (69.5 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 56/144 (38%), Positives = 78/144 (54%)
Query: 136 PSIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKL 195
PS+ L L+ N+++ V +A+ +L+ + LS NQ+ IP F E L+ L L HNKL
Sbjct: 149 PSLVFLYLEKNQLEEVPAALP--RNLEQLRLSQNQISRIPPGVFSKLENLLLLDLQHNKL 206
Query: 196 SSVNNK--TFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEG 253
S K TF GLK+L LNL N L +P ++ P S + +L L NRI I F+G
Sbjct: 207 SDGVFKPDTFQGLKNLMQLNLAHNTLRKMPPKV--P-SAIHQLYLDSNRIEAIPSGYFKG 263
Query: 254 LTALRILYLDDNQL--RSVPTPSF 275
L + L+ NQL R +P SF
Sbjct: 264 FPNLAFIRLNYNQLSDRGLPKNSF 287
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 53/174 (30%), Positives = 88/174 (50%)
Query: 143 LKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNK 201
L NRI+ VD + + SL + L NQL +P P+ L +L+L+ N++S +
Sbjct: 132 LDNNRIRKVDQRVLEKLPSLVFLYLEKNQLEEVPAA--LPRN-LEQLRLSQNQISRIPPG 188
Query: 202 TFIGLKSLKVLNLRGNFLED---LPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALR 258
F L++L +L+L+ N L D PD F L +L +L+L N + ++ +A+
Sbjct: 189 VFSKLENLLLLDLQHNKLSDGVFKPDT-FQGLKNLMQLNLAHNTLRKMPPKV---PSAIH 244
Query: 259 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT--LADGAFNGLGRLSALDL 310
LYLD N++ ++P+ F LA +R+ N + L +FN + L L L
Sbjct: 245 QLYLDSNRIEAIPSGYFKGFPNLAFIRLNYNQLSDRGLPKNSFN-ISNLLVLHL 297
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/100 (36%), Positives = 52/100 (52%)
Query: 212 LNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 271
L L+ NF+ +LP F + L ++L NRI ++DQ E L +L LYL+ NQL VP
Sbjct: 106 LYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPSLVFLYLEKNQLEEVP 165
Query: 272 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 311
L +LR+ N + + G F+ L L LDL+
Sbjct: 166 AA---LPRNLEQLRLSQNQISRIPPGVFSKLENLLLLDLQ 202
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 159 SSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNF 218
S + ++ L +N + +P+ F+ L + L++N++ V+ + L SL L L N
Sbjct: 101 SRIHYLYLQNNFITELPVESFKNATGLRWINLDNNRIRKVDQRVLEKLPSLVFLYLEKNQ 160
Query: 219 LEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRS-VPTP-SFI 276
LE++P L P +LE+L L QN+ISRI F L L +L L N+L V P +F
Sbjct: 161 LEEVPAAL--P-RNLEQLRLSQNQISRIPPGVFSKLENLLLLDLQHNKLSDGVFKPDTFQ 217
Query: 277 YLGMLAELRVGLN 289
L L +L + N
Sbjct: 218 GLKNLMQLNLAHN 230
Score = 122 (48.0 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 45/166 (27%), Positives = 83/166 (50%)
Query: 117 TLVVTCKEAN-LDVIPITLNPSIQRLVLKYNRIKTVDSAIQFYSSLQHV---DLSHNQLV 172
+LV E N L+ +P L ++++L L N+I + + +S L+++ DL HN+L
Sbjct: 150 SLVFLYLEKNQLEEVPAALPRNLEQLRLSQNQISRIPPGV--FSKLENLLLLDLQHNKLS 207
Query: 173 NIPIRG--FEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPL 230
+ + F+ + L++L L HN L + K ++ L L N +E +P F
Sbjct: 208 DGVFKPDTFQGLKNLMQLNLAHNTLRKMPPKV---PSAIHQLYLDSNRIEAIPSGYFKGF 264
Query: 231 SHLEELDLGQNRISR--IDQACFEGLTALRILYLDDNQLRSVPTPS 274
+L + L N++S + + F ++ L +L+L N++ SVP S
Sbjct: 265 PNLAFIRLNYNQLSDRGLPKNSFN-ISNLLVLHLSHNRISSVPAIS 309
>UNIPROTKB|D8MCT0 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G
protein-coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 EMBL:AC078860 EMBL:AC090116 HGNC:HGNC:4504
EMBL:FN820440 IPI:IPI00970955 SMR:D8MCT0 Ensembl:ENST00000536515
UCSC:uc021rar.1 Uniprot:D8MCT0
Length = 835
Score = 188 (71.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 61/211 (28%), Positives = 89/211 (42%)
Query: 107 CPPDCDCNDE---TLVVTCKEANLDVIPITLNPSIQRLVLKYNRI-KTVDSAIQFYSSLQ 162
CP C C + L V C + L +P L+ L L N I + + + + L+
Sbjct: 34 CPTHCHCEPDGRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLLPNPLPSLRFLE 93
Query: 163 HVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDL 222
+ L+ N L IP F L L L +N+L V + L+SL+ L+L N + L
Sbjct: 94 ELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIHSL 153
Query: 223 PDRLFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLA 282
+ F L LE LDL N + A L+ L+ L N +RS+P +F+ L
Sbjct: 154 GKKCFDGLHSLETLDLNYNNLDEFPTA-IRTLSNLKELGFHSNNIRSIPEKAFVGNPSLI 212
Query: 283 ELRVGLNVFTTLADGAFNGLGRLSALDLRGA 313
+ N + AF L L L L GA
Sbjct: 213 TIHFYDNPIQFVGRSAFQHLPELRTLTLNGA 243
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 47/175 (26%), Positives = 78/175 (44%)
Query: 137 SIQRLVLKYNRIKTVDSAIQFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQLNHNKLS 196
S++ L L YN + +AI+ S+L+ + N + +IP + F L+ + N +
Sbjct: 163 SLETLDLNYNNLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQ 222
Query: 197 SVNNKTFIGLKSLKVLNLRG-NFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFEGLT 255
V F L L+ L L G + + + PD ++LE L L +IS + Q L
Sbjct: 223 FVGRSAFQHLPELRTLTLNGASQITEFPD--LTGTANLESLTLTGAQISSLPQTVCNQLP 280
Query: 256 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 310
L++L L N L +P SF L ++ + N + F L L +L+L
Sbjct: 281 NLQVLDLSYNLLEDLP--SFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNL 333
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 39/129 (30%), Positives = 66/129 (51%)
Query: 132 ITLNPSIQRLVLKYNRIKTVDSAI-QFYSSLQHVDLSHNQLVNIPIRGFEPQEKLVELQL 190
+T +++ L L +I ++ + +LQ +DLS+N L ++P F +KL ++ L
Sbjct: 252 LTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLP--SFSVCQKLQKIDL 309
Query: 191 NHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQAC 250
HN++ + TF L SL+ LNL N + + F+ L L +LDL N +S
Sbjct: 310 RHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITG 369
Query: 251 FEGLTALRI 259
GLT L++
Sbjct: 370 LHGLTHLKL 378
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 51/173 (29%), Positives = 81/173 (46%)
Query: 135 NPSIQRLVLKYNRIKTVD-SAIQFYSSLQHVDLSH-NQLVNIPIRGFEPQEKLVELQLNH 192
NPS+ + N I+ V SA Q L+ + L+ +Q+ P L L L
Sbjct: 208 NPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFP--DLTGTANLESLTLTG 265
Query: 193 NKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFAPLSHLEELDLGQNRISRIDQACFE 252
++SS+ L +L+VL+L N LEDLP F+ L+++DL N I I F+
Sbjct: 266 AQISSLPQTVCNQLPNLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIKVDTFQ 323
Query: 253 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 305
L +LR L L N++ + +F L L +L + N+ ++ +GL L
Sbjct: 324 QLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITGLHGLTHL 376
>MGI|MGI:2442845 [details] [associations]
symbol:Lrrc38 "leucine rich repeat containing 38"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2442845 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR000483 SMART:SM00082 GO:GO:0005216 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:126755 HOGENOM:HOG000113369
HOVERGEN:HBG094920 OMA:LDEIQCS OrthoDB:EOG4GMTXN EMBL:AL611982
EMBL:BC129963 EMBL:AK045936 EMBL:AK160116 IPI:IPI00938501
RefSeq:NP_001156455.1 UniGene:Mm.94020 ProteinModelPortal:A2VDH3
SMR:A2VDH3 PRIDE:A2VDH3 Ensembl:ENSMUST00000052458 GeneID:242735
KEGG:mmu:242735 UCSC:uc008vqb.2 GeneTree:ENSGT00700000104451
InParanoid:A2VDH3 NextBio:385532 Bgee:A2VDH3 CleanEx:MM_LRRC38
Genevestigator:A2VDH3 Uniprot:A2VDH3
Length = 298
Score = 179 (68.1 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 107 CPPDCDCNDETLVVTCKEANLDVIPITLNPSIQRLVLKYNRIKTV-DSAIQFYSSLQHVD 165
CP C C D V C++ L +P +++L++ NRI+ + + F+ L ++D
Sbjct: 32 CPAGCACTDPH-TVDCRDRGLPSVPDPFPLDVRKLLVAGNRIQQIPEDFFIFHGDLVYLD 90
Query: 166 LSHNQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDR 225
+N L ++ F KL L L++N L+ + F L L+L N L + +
Sbjct: 91 FRNNSLRSLEEGTFSGSGKLAFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNHLAGVHEA 150
Query: 226 LFAPLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDN 265
F L L+ L+L N + ++ A + L ALR + LD N
Sbjct: 151 AFESLESLQVLELNDNNLRSLNVAALDALPALRTVRLDGN 190
Score = 139 (54.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 40/121 (33%), Positives = 58/121 (47%)
Query: 169 NQLVNIPIRGFEPQEKLVELQLNHNKLSSVNNKTFIGLKSLKVLNLRGNFLEDLPDRLFA 228
N++ IP F LV L +N L S+ TF G L L+L N L L F
Sbjct: 70 NRIQQIPEDFFIFHGDLVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNNLTQLGAGAFR 129
Query: 229 PLSHLEELDLGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 288
L +L L N ++ + +A FE L +L++L L+DN LRS+ + L L +R+
Sbjct: 130 SAGRLVKLSLANNHLAGVHEAAFESLESLQVLELNDNNLRSLNVAALDALPALRTVRLDG 189
Query: 289 N 289
N
Sbjct: 190 N 190
WARNING: HSPs involving 780 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 332 321 0.00085 116 3 11 22 0.50 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1030
No. of states in DFA: 605 (64 KB)
Total size of DFA: 213 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 29.35u 0.08s 29.43t Elapsed: 00:00:08
Total cpu time: 29.52u 0.09s 29.61t Elapsed: 00:00:10
Start: Thu Aug 15 12:03:28 2013 End: Thu Aug 15 12:03:38 2013
WARNINGS ISSUED: 2