Query psy8551
Match_columns 581
No_of_seqs 254 out of 3396
Neff 10.6
Searched_HMMs 46136
Date Fri Aug 16 21:46:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8551.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8551hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4194|consensus 100.0 2.6E-50 5.5E-55 384.0 10.8 448 2-580 35-496 (873)
2 PLN00113 leucine-rich repeat r 100.0 3.7E-41 8E-46 378.3 29.5 479 32-543 101-588 (968)
3 PLN00113 leucine-rich repeat r 100.0 6.2E-41 1.4E-45 376.5 29.4 507 21-543 50-564 (968)
4 KOG4194|consensus 100.0 2.7E-37 5.8E-42 295.2 7.4 421 15-565 27-457 (873)
5 KOG4237|consensus 100.0 6.4E-35 1.4E-39 266.8 0.5 445 10-488 34-498 (498)
6 KOG0472|consensus 100.0 9.8E-37 2.1E-41 279.0 -12.5 470 31-539 16-541 (565)
7 KOG0472|consensus 100.0 8.2E-34 1.8E-38 259.9 -12.4 449 32-523 76-548 (565)
8 KOG4237|consensus 100.0 2.4E-31 5.2E-36 243.4 0.2 344 193-579 52-400 (498)
9 KOG0444|consensus 100.0 5.9E-31 1.3E-35 253.9 -6.2 364 44-538 6-374 (1255)
10 KOG0618|consensus 99.9 5.8E-29 1.3E-33 250.9 -3.7 457 32-538 6-488 (1081)
11 KOG0444|consensus 99.9 1.4E-28 3.1E-33 237.6 -5.9 350 38-447 23-380 (1255)
12 KOG0618|consensus 99.9 3.9E-27 8.4E-32 237.9 -4.2 437 32-539 53-513 (1081)
13 PLN03210 Resistant to P. syrin 99.9 2.6E-21 5.7E-26 217.9 26.4 346 130-538 549-905 (1153)
14 PLN03210 Resistant to P. syrin 99.8 2.2E-19 4.7E-24 202.5 25.3 316 155-538 550-881 (1153)
15 PRK15387 E3 ubiquitin-protein 99.8 1.6E-19 3.5E-24 188.8 16.7 265 16-346 195-459 (788)
16 PRK15387 E3 ubiquitin-protein 99.8 2.5E-18 5.4E-23 179.9 16.2 263 45-447 201-463 (788)
17 PRK15370 E3 ubiquitin-protein 99.7 4.1E-17 8.8E-22 172.1 12.3 239 32-345 186-428 (754)
18 PRK15370 E3 ubiquitin-protein 99.6 1.6E-15 3.5E-20 160.1 13.7 225 43-344 176-400 (754)
19 KOG0617|consensus 99.5 4.7E-16 1E-20 127.1 -4.8 156 45-228 33-190 (264)
20 cd00116 LRR_RI Leucine-rich re 99.5 3.7E-15 8E-20 146.4 -0.7 207 135-343 77-318 (319)
21 cd00116 LRR_RI Leucine-rich re 99.4 1.7E-14 3.8E-19 141.6 0.4 39 405-443 250-292 (319)
22 KOG0617|consensus 99.4 2.8E-15 6E-20 122.6 -4.8 167 58-253 24-191 (264)
23 PF14580 LRR_9: Leucine-rich r 99.2 1.3E-11 2.9E-16 106.1 3.2 116 35-176 8-126 (175)
24 KOG3207|consensus 99.2 8.6E-12 1.9E-16 117.5 1.4 212 282-543 119-343 (505)
25 PF14580 LRR_9: Leucine-rich r 99.1 1.1E-10 2.5E-15 100.4 3.9 129 135-267 15-148 (175)
26 KOG1259|consensus 99.0 2.1E-10 4.4E-15 103.0 1.9 198 63-270 209-410 (490)
27 KOG1259|consensus 98.9 2.6E-10 5.7E-15 102.3 1.7 134 404-545 283-418 (490)
28 KOG3207|consensus 98.9 1.6E-10 3.4E-15 109.1 -0.7 37 308-344 300-338 (505)
29 COG4886 Leucine-rich repeat (L 98.9 1.4E-09 3.1E-14 109.9 6.1 188 50-268 98-286 (394)
30 KOG1909|consensus 98.9 7.6E-11 1.6E-15 108.2 -3.2 248 45-344 30-310 (382)
31 PF13855 LRR_8: Leucine rich r 98.9 2.3E-09 4.9E-14 75.8 4.8 59 45-103 1-60 (61)
32 KOG1909|consensus 98.9 2.3E-10 5.1E-15 105.0 -0.9 215 45-269 58-308 (382)
33 KOG0532|consensus 98.9 7.6E-11 1.7E-15 114.8 -4.5 189 32-251 58-250 (722)
34 COG4886 Leucine-rich repeat (L 98.9 4.1E-09 8.9E-14 106.5 7.3 179 45-253 116-295 (394)
35 KOG4658|consensus 98.8 7.6E-09 1.7E-13 111.8 6.3 140 34-198 511-653 (889)
36 PF13855 LRR_8: Leucine rich r 98.7 1.2E-08 2.6E-13 72.0 4.1 60 139-198 1-60 (61)
37 KOG1859|consensus 98.6 8.1E-10 1.7E-14 110.7 -5.4 128 405-540 164-293 (1096)
38 KOG4658|consensus 98.6 2.2E-08 4.8E-13 108.3 4.3 202 138-345 522-730 (889)
39 KOG0531|consensus 98.6 5.9E-09 1.3E-13 105.5 -0.8 85 137-226 116-201 (414)
40 KOG0531|consensus 98.6 7.9E-09 1.7E-13 104.6 0.0 190 45-268 72-264 (414)
41 KOG0532|consensus 98.5 5E-09 1.1E-13 102.4 -4.2 185 27-221 78-270 (722)
42 KOG2982|consensus 98.5 2.5E-08 5.4E-13 89.8 -0.3 206 140-345 46-262 (418)
43 PLN03150 hypothetical protein; 98.5 2.2E-07 4.7E-12 98.5 6.4 106 407-514 420-526 (623)
44 TIGR00864 PCC polycystin catio 98.4 1.5E-07 3.2E-12 108.7 4.4 72 509-580 1-78 (2740)
45 PF13306 LRR_5: Leucine rich r 98.4 1.3E-06 2.8E-11 72.8 8.3 104 129-237 25-128 (129)
46 KOG2120|consensus 98.4 3.7E-09 8.1E-14 95.0 -8.0 180 163-342 185-373 (419)
47 PF13306 LRR_5: Leucine rich r 98.3 1.1E-06 2.4E-11 73.3 6.8 126 130-261 3-128 (129)
48 PLN03150 hypothetical protein; 98.3 1.3E-06 2.8E-11 92.7 7.9 108 164-271 419-527 (623)
49 KOG2120|consensus 98.3 7.6E-09 1.7E-13 93.0 -8.0 202 45-269 159-373 (419)
50 KOG4341|consensus 98.3 1.8E-08 3.9E-13 95.0 -6.3 147 404-550 293-450 (483)
51 KOG4341|consensus 98.2 6.9E-08 1.5E-12 91.2 -4.3 300 187-533 138-459 (483)
52 KOG1644|consensus 98.2 2.2E-06 4.9E-11 73.2 4.8 127 46-197 20-150 (233)
53 PF12799 LRR_4: Leucine Rich r 98.2 1.7E-06 3.7E-11 55.6 3.1 40 45-84 1-40 (44)
54 KOG1859|consensus 98.1 6.4E-08 1.4E-12 97.5 -6.3 144 4-176 144-292 (1096)
55 PF12799 LRR_4: Leucine Rich r 98.0 5.6E-06 1.2E-10 53.3 2.7 36 504-539 2-37 (44)
56 KOG1644|consensus 97.9 1.8E-05 3.9E-10 67.8 5.6 124 142-268 22-149 (233)
57 KOG2982|consensus 97.9 2.8E-06 6.1E-11 76.9 0.2 211 283-545 70-296 (418)
58 KOG4579|consensus 97.8 1.5E-06 3.3E-11 69.3 -2.7 107 47-178 29-138 (177)
59 smart00082 LRRCT Leucine rich 97.7 1.9E-05 4E-10 53.2 2.4 44 536-580 1-48 (51)
60 COG5238 RNA1 Ran GTPase-activa 97.6 7.3E-06 1.6E-10 73.3 -1.6 146 207-353 88-263 (388)
61 PRK15386 type III secretion pr 97.6 0.0002 4.4E-09 69.9 7.8 117 404-536 51-187 (426)
62 COG5238 RNA1 Ran GTPase-activa 97.5 3E-05 6.6E-10 69.4 1.3 84 186-269 156-252 (388)
63 KOG3665|consensus 97.5 3.6E-05 7.7E-10 81.7 1.6 128 404-533 147-282 (699)
64 KOG4579|consensus 97.5 3.6E-06 7.8E-11 67.2 -4.7 135 406-544 28-164 (177)
65 KOG3665|consensus 97.4 6.4E-05 1.4E-09 79.8 2.4 79 92-172 122-204 (699)
66 PRK15386 type III secretion pr 97.3 0.00041 8.8E-09 67.9 6.1 101 425-539 48-169 (426)
67 KOG2123|consensus 97.1 1.3E-05 2.9E-10 71.9 -5.7 101 404-509 18-123 (388)
68 KOG3864|consensus 96.5 0.00016 3.5E-09 62.1 -3.7 84 431-514 103-187 (221)
69 KOG2123|consensus 96.2 0.00015 3.2E-09 65.4 -5.7 78 140-221 20-98 (388)
70 KOG2739|consensus 96.1 0.0016 3.5E-08 58.6 0.2 106 404-513 42-153 (260)
71 KOG2739|consensus 95.9 0.0037 8.1E-08 56.4 1.7 58 186-243 90-151 (260)
72 KOG1947|consensus 95.8 0.0018 4E-08 67.5 -0.7 35 210-244 187-223 (482)
73 KOG1947|consensus 95.8 0.0024 5.1E-08 66.7 0.0 36 258-293 187-223 (482)
74 PF00560 LRR_1: Leucine Rich R 95.8 0.0055 1.2E-07 32.5 1.4 19 504-522 1-19 (22)
75 PF00560 LRR_1: Leucine Rich R 95.6 0.0069 1.5E-07 32.2 1.3 16 70-85 2-17 (22)
76 PF13504 LRR_7: Leucine rich r 95.5 0.008 1.7E-07 29.6 1.3 17 503-519 1-17 (17)
77 smart00013 LRRNT Leucine rich 95.4 0.0091 2E-07 35.5 1.5 32 12-48 1-32 (33)
78 PF01462 LRRNT: Leucine rich r 95.2 0.005 1.1E-07 34.9 -0.0 28 12-44 1-28 (28)
79 KOG3864|consensus 94.4 0.0041 8.9E-08 53.8 -2.5 84 406-489 102-187 (221)
80 PF13504 LRR_7: Leucine rich r 93.7 0.047 1E-06 26.8 1.5 15 46-60 2-16 (17)
81 smart00370 LRR Leucine-rich re 92.4 0.092 2E-06 29.1 1.6 22 502-523 1-22 (26)
82 smart00369 LRR_TYP Leucine-ric 92.4 0.092 2E-06 29.1 1.6 22 502-523 1-22 (26)
83 TIGR00864 PCC polycystin catio 92.3 0.18 3.8E-06 60.7 5.2 79 315-393 1-85 (2740)
84 smart00370 LRR Leucine-rich re 92.0 0.086 1.9E-06 29.2 1.2 22 68-89 2-23 (26)
85 smart00369 LRR_TYP Leucine-ric 92.0 0.086 1.9E-06 29.2 1.2 22 68-89 2-23 (26)
86 PF01463 LRRCT: Leucine rich r 87.2 0.31 6.8E-06 26.7 0.9 21 559-580 2-22 (25)
87 smart00364 LRR_BAC Leucine-ric 86.5 0.41 8.8E-06 26.4 1.1 18 503-520 2-19 (26)
88 KOG4308|consensus 82.9 0.0063 1.4E-07 62.0 -12.7 37 503-539 262-303 (478)
89 PF13516 LRR_6: Leucine Rich r 80.8 0.97 2.1E-05 24.3 1.1 14 503-516 2-15 (24)
90 smart00365 LRR_SD22 Leucine-ri 80.8 1.4 2.9E-05 24.5 1.7 17 68-84 2-18 (26)
91 KOG0473|consensus 79.3 0.043 9.2E-07 48.7 -7.0 93 419-539 32-124 (326)
92 KOG0473|consensus 79.0 0.062 1.3E-06 47.7 -6.1 97 123-222 26-122 (326)
93 KOG4308|consensus 77.6 0.022 4.7E-07 58.2 -10.9 184 47-249 89-304 (478)
94 smart00367 LRR_CC Leucine-rich 69.8 2.9 6.4E-05 23.0 1.2 16 526-541 2-17 (26)
95 KOG3763|consensus 64.1 2.3 4.9E-05 43.2 0.1 61 44-104 217-282 (585)
96 smart00368 LRR_RI Leucine rich 62.6 5.8 0.00013 22.3 1.5 13 504-516 3-15 (28)
97 KOG3763|consensus 38.5 15 0.00032 37.7 1.1 62 478-541 218-285 (585)
No 1
>KOG4194|consensus
Probab=100.00 E-value=2.6e-50 Score=383.98 Aligned_cols=448 Identities=31% Similarity=0.481 Sum_probs=308.6
Q ss_pred ccchhhhhhhcCCCCCCCCCCccCCCccccccCCCccC-----CCCCCcCccEEEcccCCccccc-ccccCCCcccEEEc
Q psy8551 2 LVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVI-----PSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDL 75 (581)
Q Consensus 2 ~~~~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~l~~i-----p~~~~~~l~~L~L~~~~i~~l~-~~~~~~~~L~~L~l 75 (581)
+++||---+.-||..|+|.. ....| +++.++++ +..+|+..+.|++++|.+..+. ..|.++++|+.+.+
T Consensus 35 vvd~ga~~~~~cpa~c~c~~---~lldc--s~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l 109 (873)
T KOG4194|consen 35 VVDAGAGDLSECPATCPCNT---RLLDC--SDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNL 109 (873)
T ss_pred ccccCCCccccCCCcCCCCc---eeeec--CccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeee
Confidence 56777777789999999998 77899 99999987 6667788899999999998764 46888999999999
Q ss_pred CCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccC
Q psy8551 76 SHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 155 (581)
Q Consensus 76 s~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~ 155 (581)
..|.++.+|. .-....+|+.|+|.+|. |+.+....++.++.|++||++.|.|+.++
T Consensus 110 ~~N~Lt~IP~-f~~~sghl~~L~L~~N~-----------------------I~sv~se~L~~l~alrslDLSrN~is~i~ 165 (873)
T KOG4194|consen 110 NKNELTRIPR-FGHESGHLEKLDLRHNL-----------------------ISSVTSEELSALPALRSLDLSRNLISEIP 165 (873)
T ss_pred ccchhhhccc-ccccccceeEEeeeccc-----------------------cccccHHHHHhHhhhhhhhhhhchhhccc
Confidence 9998888884 23333457777777764 44455555666667777777777776666
Q ss_pred CcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCC
Q psy8551 156 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 235 (581)
Q Consensus 156 ~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 235 (581)
...|..-.++++|+|++|.|+.+..+.|.++.+|..|.|++|+++.+++..|..+ +
T Consensus 166 ~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L------------------------~ 221 (873)
T KOG4194|consen 166 KPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRL------------------------P 221 (873)
T ss_pred CCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhc------------------------c
Confidence 6555555566666666666665555555555555555555555555554444444 4
Q ss_pred CCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEe
Q psy8551 236 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLN 315 (581)
Q Consensus 236 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~ 315 (581)
+|+.|++..|.+.......|.++++|+.+.+..| .+....++.|..+.++++|++..| .+..+..+++.++++|+.|+
T Consensus 222 ~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN-~I~kL~DG~Fy~l~kme~l~L~~N-~l~~vn~g~lfgLt~L~~L~ 299 (873)
T KOG4194|consen 222 KLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRN-DISKLDDGAFYGLEKMEHLNLETN-RLQAVNEGWLFGLTSLEQLD 299 (873)
T ss_pred hhhhhhccccceeeehhhhhcCchhhhhhhhhhc-CcccccCcceeeecccceeecccc-hhhhhhcccccccchhhhhc
Confidence 4444454444444443334444444444444432 233333334444455555555555 56666666666777777777
Q ss_pred cCCCCCccccc-cccCCCCcceEEccCCCCccCCchhhHHHHHhhcCCCceeecCCCcccccccccCCccccccCCCCcc
Q psy8551 316 LKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394 (581)
Q Consensus 316 l~~~~l~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 394 (581)
++.|.|..+.. .+..
T Consensus 300 lS~NaI~rih~d~Wsf---------------------------------------------------------------- 315 (873)
T KOG4194|consen 300 LSYNAIQRIHIDSWSF---------------------------------------------------------------- 315 (873)
T ss_pred cchhhhheeecchhhh----------------------------------------------------------------
Confidence 77776664432 2222
Q ss_pred ccCccccCCCCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEe---cC
Q psy8551 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV---RK 471 (581)
Q Consensus 395 ~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~---~~ 471 (581)
++.|+.|+++.|.++.++++.|..+..|++|.+++|.++.+...+|..+++|++|++++|. +.-. ..
T Consensus 316 ---------tqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~-ls~~IEDaa 385 (873)
T KOG4194|consen 316 ---------TQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNE-LSWCIEDAA 385 (873)
T ss_pred ---------cccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCe-EEEEEecch
Confidence 4556666666666666666666666667777777777666666666666777777776643 2211 33
Q ss_pred CccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCCcceeec-cccccCCcceEEecCCCcccccCchhHHHHH
Q psy8551 472 GAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREM 550 (581)
Q Consensus 472 ~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~-~~~~~~~~L~~L~l~~np~~c~c~~~~~~~~ 550 (581)
..|..+++|+.|++.+| +++.++..+|.++++|+.|+|.+|.|.++. +.+..+ .|++|-+..-.+.|||.++||.+|
T Consensus 386 ~~f~gl~~LrkL~l~gN-qlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql~Wl~qW 463 (873)
T KOG4194|consen 386 VAFNGLPSLRKLRLTGN-QLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQLKWLAQW 463 (873)
T ss_pred hhhccchhhhheeecCc-eeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEeccHHHHHHH
Confidence 45777889999999999 999999999999999999999999999875 556666 999999999999999999999999
Q ss_pred Hhhc---CCCceeeCCCcccccccccccCcccc
Q psy8551 551 LVRR---NTSAVFCNSPAPLKYKSLISLSAEDL 580 (581)
Q Consensus 551 ~~~~---~~~~~~c~~~~~~~~~~~~~~~~~~~ 580 (581)
+.++ ......|..|+.+.|+.+.+++.+++
T Consensus 464 l~~~~lq~sv~a~CayPe~Lad~~i~svd~~~l 496 (873)
T KOG4194|consen 464 LYRRKLQSSVIAKCAYPEPLADQSIVSVDTANL 496 (873)
T ss_pred HHhcccccceeeeccCCcccccceeEeechhhc
Confidence 9875 33344799999999999999998875
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.7e-41 Score=378.32 Aligned_cols=479 Identities=21% Similarity=0.210 Sum_probs=352.7
Q ss_pred ccCCCc-cCCCCC---CcCccEEEcccCCccc-ccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCC
Q psy8551 32 QEANLD-VIPSHS---NPSIQRLVLSTNRIKT-VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFP 106 (581)
Q Consensus 32 ~~~~l~-~ip~~~---~~~l~~L~L~~~~i~~-l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 106 (581)
.++.+. .+|..+ .++|++|+|++|.+.. +|. ..+++|++|++++|.++...+..+..+++|++|++++|.+ .
T Consensus 101 s~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l-~ 177 (968)
T PLN00113 101 SNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVL-V 177 (968)
T ss_pred CCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcc-c
Confidence 445554 566654 3789999999998874 443 4688999999999988866566788899999999999875 2
Q ss_pred cccccccCCccccc--ccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCC
Q psy8551 107 QQIVCSIISPRRVE--IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184 (581)
Q Consensus 107 ~~~~~~~~~~~~L~--~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~ 184 (581)
...+..+...++|+ +++.|.+....+..++++++|+.|++++|.+....+..+..+++|++|++++|.+.+..+..+.
T Consensus 178 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 257 (968)
T PLN00113 178 GKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG 257 (968)
T ss_pred ccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHh
Confidence 23334455667777 6667888877777888999999999999988866666788899999999999988877777788
Q ss_pred CCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCccccee
Q psy8551 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264 (581)
Q Consensus 185 ~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 264 (581)
++++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+....+..+..+++|+.|
T Consensus 258 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 337 (968)
T PLN00113 258 NLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVL 337 (968)
T ss_pred CCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEE
Confidence 89999999999998887777778888999999999998887666778888999999999998887777778888999999
Q ss_pred eecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCc-cccccccCCCCcceEEccCCC
Q psy8551 265 EITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFT-SFSESMLAWPELRTIDIAENP 343 (581)
Q Consensus 265 ~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~-~~~~~~~~~~~L~~L~l~~~~ 343 (581)
++.+|. +....+..+..+.+|+.|++++|...+.++ ..+..+++|+.+++++|.+. .+|..+..+++|+.|++++|.
T Consensus 338 ~L~~n~-l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p-~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~ 415 (968)
T PLN00113 338 QLWSNK-FSGEIPKNLGKHNNLTVLDLSTNNLTGEIP-EGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNS 415 (968)
T ss_pred ECcCCC-CcCcCChHHhCCCCCcEEECCCCeeEeeCC-hhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCE
Confidence 998864 333344456777889999998884334444 35677788888888888877 456677778888888888887
Q ss_pred CccCCchhhHHHHHhhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChh
Q psy8551 344 IECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423 (581)
Q Consensus 344 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~ 423 (581)
+.+..+. ++ ..+..+...+ ...+.+.......+..+++|+.|++++|.+.+..+.
T Consensus 416 l~~~~p~-~~----------------------~~l~~L~~L~--Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~ 470 (968)
T PLN00113 416 FSGELPS-EF----------------------TKLPLVYFLD--ISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPD 470 (968)
T ss_pred eeeECCh-hH----------------------hcCCCCCEEE--CcCCcccCccChhhccCCCCcEEECcCceeeeecCc
Confidence 6532211 00 0111111111 112222333333445577888888888877755544
Q ss_pred hhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCC
Q psy8551 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLP 503 (581)
Q Consensus 424 ~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~ 503 (581)
.+ ..++|+.|++++|.+.+..+..+..+++|+.|++++| .+....+..+.++++|++|++++| .+....+..+..++
T Consensus 471 ~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~ 547 (968)
T PLN00113 471 SF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSEN-KLSGEIPDELSSCKKLVSLDLSHN-QLSGQIPASFSEMP 547 (968)
T ss_pred cc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCC-cceeeCChHHcCccCCCEEECCCC-cccccCChhHhCcc
Confidence 33 4577888888888888777777778888888888874 566666667777888888888888 44443356677888
Q ss_pred CccEEEcCCCcce-eeccccccCCcceEEecCCCcccccCc
Q psy8551 504 NLYHLNLKENAFT-SFSESMLAWPELRTIDIAENPIECGCN 543 (581)
Q Consensus 504 ~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~l~~np~~c~c~ 543 (581)
+|++|++++|.++ .+|..+..+++|+.+++++|++.+..+
T Consensus 548 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 548 VLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred cCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 8888888888877 577777778888888888888877655
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.2e-41 Score=376.48 Aligned_cols=507 Identities=21% Similarity=0.188 Sum_probs=365.2
Q ss_pred CCccCCCccccccCCCccCCCCCCcCccEEEcccCCccc-ccccccCCCcccEEEcCCCcee-ecCCCCCCCCCcccEEe
Q psy8551 21 RFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKT-VDSAIPIYLSLQHVDLSHTTWL-IIPIGGFEPQEKLVELQ 98 (581)
Q Consensus 21 ~~~~~~~~c~~~~~~l~~ip~~~~~~l~~L~L~~~~i~~-l~~~~~~~~~L~~L~ls~~~l~-~~~~~~~~~l~~L~~L~ 98 (581)
.|......|.|.+..... ..+++.|+|+++.+.. ++..+..+++|++|++++|.+. .+|...+..+++|++|+
T Consensus 50 ~w~~~~~~c~w~gv~c~~-----~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~ 124 (968)
T PLN00113 50 NWNSSADVCLWQGITCNN-----SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLN 124 (968)
T ss_pred CCCCCCCCCcCcceecCC-----CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEE
Confidence 344445677665555532 2478999999988874 4567888999999999999887 57766677889999999
Q ss_pred CCCCCCCCcccccccCCccccc--ccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcce
Q psy8551 99 LNHNKHFPQQIVCSIISPRRVE--IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 176 (581)
Q Consensus 99 l~~n~~~~~~~~~~~~~~~~L~--~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~ 176 (581)
+++|.+.. ..+. ...+.|+ +++.|.++...+..++++++|++|++++|.+....+..+.++++|++|++++|.+.
T Consensus 125 Ls~n~l~~-~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 201 (968)
T PLN00113 125 LSNNNFTG-SIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLV 201 (968)
T ss_pred CcCCcccc-ccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCc
Confidence 99887621 1111 2235566 66778887777777888999999999999887665557888899999999999888
Q ss_pred eccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccC
Q psy8551 177 TLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 256 (581)
Q Consensus 177 ~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~ 256 (581)
+..+..+.++++|+.|++++|.++...+..+..+++|++|++++|.+++..+..+..+++|++|++++|.+.+..+..+.
T Consensus 202 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 281 (968)
T PLN00113 202 GQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIF 281 (968)
T ss_pred CcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHh
Confidence 77777788889999999999988877777788889999999999988866667788889999999999888877666778
Q ss_pred CCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCc-cccccccCCCCcc
Q psy8551 257 GLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFT-SFSESMLAWPELR 335 (581)
Q Consensus 257 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~-~~~~~~~~~~~L~ 335 (581)
.+++|+.|++++|. +....+..+..+++|+.|++++|...+.++ ..+..+++|+.|++++|.+. .+|..+..+++|+
T Consensus 282 ~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~ 359 (968)
T PLN00113 282 SLQKLISLDLSDNS-LSGEIPELVIQLQNLEILHLFSNNFTGKIP-VALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLT 359 (968)
T ss_pred hccCcCEEECcCCe-eccCCChhHcCCCCCcEEECCCCccCCcCC-hhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCc
Confidence 88889999998763 444445566778889999998884444443 46788888999999988887 5666777888899
Q ss_pred eEEccCCCCccCCchhhHHHHHhhc--CCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcC
Q psy8551 336 TIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLT 413 (581)
Q Consensus 336 ~L~l~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~ 413 (581)
.|++++|.+.+..+. ++....... ...........+.....+..+.. +....+.+.......|..++.|+.|+++
T Consensus 360 ~L~Ls~n~l~~~~p~-~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~--L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 436 (968)
T PLN00113 360 VLDLSTNNLTGEIPE-GLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRR--VRLQDNSFSGELPSEFTKLPLVYFLDIS 436 (968)
T ss_pred EEECCCCeeEeeCCh-hHhCcCCCCEEECcCCEecccCCHHHhCCCCCCE--EECcCCEeeeECChhHhcCCCCCEEECc
Confidence 999988877543221 111000000 00000000000000111112211 2222333333344556677888888888
Q ss_pred CCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCcee
Q psy8551 414 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKI 493 (581)
Q Consensus 414 ~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~ 493 (581)
+|.+++..+..+..+++|+.|++++|.+.+..+..+ ..++|+.|++++| .+....+..+.++++|+.|++++| .+..
T Consensus 437 ~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n-~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~ 513 (968)
T PLN00113 437 NNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRN-QFSGAVPRKLGSLSELMQLKLSEN-KLSG 513 (968)
T ss_pred CCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCC-ccCCccChhhhhhhccCEEECcCC-ccee
Confidence 888887766677778888888888888877666544 4578888888874 566666677888999999999999 4544
Q ss_pred ecCCccCCCCCccEEEcCCCccee-eccccccCCcceEEecCCCcccccCc
Q psy8551 494 IEEDALVGLPNLYHLNLKENAFTS-FSESMLAWPELRTIDIAENPIECGCN 543 (581)
Q Consensus 494 ~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~l~~np~~c~c~ 543 (581)
..+..+.++++|++|++++|.+++ +|..+..+++|+.|++++|+++..-+
T Consensus 514 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 564 (968)
T PLN00113 514 EIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP 564 (968)
T ss_pred eCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCC
Confidence 445678899999999999999884 67788889999999999999976444
No 4
>KOG4194|consensus
Probab=100.00 E-value=2.7e-37 Score=295.25 Aligned_cols=421 Identities=25% Similarity=0.370 Sum_probs=293.5
Q ss_pred CCCCCCCCccCCCccccccCCCccCCCCCCcCccEEEcccCCcccccc-ccc--CCCcccEEEcCCCceeecCCCCCCCC
Q psy8551 15 NPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIP--IYLSLQHVDLSHTTWLIIPIGGFEPQ 91 (581)
Q Consensus 15 ~~c~~~~~~~~~~~c~~~~~~l~~ip~~~~~~l~~L~L~~~~i~~l~~-~~~--~~~~L~~L~ls~~~l~~~~~~~~~~l 91 (581)
..|+|.. --+.| +.-.....|...+-+.+-|+.++..+..+.. .+. ....-++||+++|++..+....|.++
T Consensus 27 g~~~~~g---~vvd~--ga~~~~~cpa~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl 101 (873)
T KOG4194|consen 27 GLCHCVG---NVVDA--GAGDLSECPATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNL 101 (873)
T ss_pred HHHHhcC---ccccc--CCCccccCCCcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcC
Confidence 4455554 34566 5555566788888888888888888876532 111 12345567777777776666666666
Q ss_pred CcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECC
Q psy8551 92 EKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 171 (581)
Q Consensus 92 ~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~ 171 (581)
++|+++++..|. ++.+|. ...-..+|+.|+|.
T Consensus 102 ~nLq~v~l~~N~-----------------------------------------------Lt~IP~-f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 102 PNLQEVNLNKNE-----------------------------------------------LTRIPR-FGHESGHLEKLDLR 133 (873)
T ss_pred Ccceeeeeccch-----------------------------------------------hhhccc-ccccccceeEEeee
Confidence 666666666653 333332 11112234455555
Q ss_pred CCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccC
Q psy8551 172 LNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251 (581)
Q Consensus 172 ~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 251 (581)
+|.|..+....+..++.|+.|||+.|.++.+....|..-.++++|+|+.|.|+.+..+.|..+.+|..|.+++|.++.++
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 55544444444555555555555555556555556666678888888888888888788888889999999999999999
Q ss_pred CcccCCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccccCC
Q psy8551 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESMLAW 331 (581)
Q Consensus 252 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~ 331 (581)
...|.+++.|+.|++..| .+..+....|.++.+|+.+.+..| .+..+..++|..+.++++|++..|.++.+.
T Consensus 214 ~r~Fk~L~~L~~LdLnrN-~irive~ltFqgL~Sl~nlklqrN-~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn------ 285 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRN-RIRIVEGLTFQGLPSLQNLKLQRN-DISKLDDGAFYGLEKMEHLNLETNRLQAVN------ 285 (873)
T ss_pred HHHhhhcchhhhhhcccc-ceeeehhhhhcCchhhhhhhhhhc-CcccccCcceeeecccceeecccchhhhhh------
Confidence 988988888888888764 333333444444445555555444 444444444444444444444444444332
Q ss_pred CCcceEEccCCCCccCCchhhHHHHHhhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEE
Q psy8551 332 PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLV 411 (581)
Q Consensus 332 ~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~ 411 (581)
..++-+++.|+.|+
T Consensus 286 ------------------------------------------------------------------~g~lfgLt~L~~L~ 299 (873)
T KOG4194|consen 286 ------------------------------------------------------------------EGWLFGLTSLEQLD 299 (873)
T ss_pred ------------------------------------------------------------------cccccccchhhhhc
Confidence 22344567788888
Q ss_pred cCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCc
Q psy8551 412 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKL 491 (581)
Q Consensus 412 l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l 491 (581)
++.|.+..+.++.+..+++|++|++++|.++..++..|..+..|++|.++. +.++.+....|..+.+|++||++.| .+
T Consensus 300 lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~-Nsi~~l~e~af~~lssL~~LdLr~N-~l 377 (873)
T KOG4194|consen 300 LSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSH-NSIDHLAEGAFVGLSSLHKLDLRSN-EL 377 (873)
T ss_pred cchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccc-cchHHHHhhHHHHhhhhhhhcCcCC-eE
Confidence 888888877778899999999999999999999999999999999999998 6889999999999999999999999 55
Q ss_pred eeecC---CccCCCCCccEEEcCCCcceeec-cccccCCcceEEecCCCcccccCchhHHHHHH-hh--cCCCceeeCCC
Q psy8551 492 KIIEE---DALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREML-VR--RNTSAVFCNSP 564 (581)
Q Consensus 492 ~~~~~---~~~~~l~~L~~L~l~~n~l~~l~-~~~~~~~~L~~L~l~~np~~c~c~~~~~~~~~-~~--~~~~~~~c~~~ 564 (581)
...-+ ..|.++++|+.|++.+|++..++ ..+..++.|++|++.+|+|...=.. .|..+- ++ -+.....|++.
T Consensus 378 s~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~n-AFe~m~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 378 SWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPN-AFEPMELKELVMNSSSFLCDCQ 456 (873)
T ss_pred EEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeeccc-ccccchhhhhhhcccceEEecc
Confidence 44332 35888999999999999999999 4577899999999999999654332 344432 22 36777788876
Q ss_pred c
Q psy8551 565 A 565 (581)
Q Consensus 565 ~ 565 (581)
.
T Consensus 457 l 457 (873)
T KOG4194|consen 457 L 457 (873)
T ss_pred H
Confidence 4
No 5
>KOG4237|consensus
Probab=100.00 E-value=6.4e-35 Score=266.76 Aligned_cols=445 Identities=23% Similarity=0.390 Sum_probs=307.3
Q ss_pred hhcCCCCCCCCCCccCCCccccccCCCccCCCCCCcCccEEEcccCCcccccc-cccCCCcccEEEcCCCceeecCCCCC
Q psy8551 10 RSKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGF 88 (581)
Q Consensus 10 ~~~~~~~c~~~~~~~~~~~c~~~~~~l~~ip~~~~~~l~~L~L~~~~i~~l~~-~~~~~~~L~~L~ls~~~l~~~~~~~~ 88 (581)
..+||.+|+|.......|.| .+.+++.||.++|+....++|..|+|+.+|+ +|..+++|+.||||+|+|+.|.+.+|
T Consensus 34 ~~~CP~pC~Cs~~~g~~VdC--r~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF 111 (498)
T KOG4237|consen 34 ASACPAPCTCSDVEGGIVDC--RGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAF 111 (498)
T ss_pred cccCCCCcccCCCCCceEEc--cCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhh
Confidence 56999999999877889999 9999999999999999999999999999986 89999999999999999999999999
Q ss_pred CCCCcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEE
Q psy8551 89 EPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 168 (581)
Q Consensus 89 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L 168 (581)
.++++|..|-+-++ |+|++++...|+++..|+.|.+.-|++..+..+.|..++++..|
T Consensus 112 ~GL~~l~~Lvlyg~----------------------NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lL 169 (498)
T KOG4237|consen 112 KGLASLLSLVLYGN----------------------NKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLL 169 (498)
T ss_pred hhhHhhhHHHhhcC----------------------CchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchh
Confidence 99988776665552 23566666666666666666666666666666666666666666
Q ss_pred ECCCCcceeccCCcCCCCCCCcEEEcCCCCcc------------ccCccccCCCCCCcEEECCCCcCCccCccccCCC-C
Q psy8551 169 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLT------------NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL-T 235 (581)
Q Consensus 169 ~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~------------~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l-~ 235 (581)
.+..|.+..+....|..+..++.+.+..|... ...+..++......-..+.+.++..+....+.-. .
T Consensus 170 slyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~e 249 (498)
T KOG4237|consen 170 SLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLE 249 (498)
T ss_pred cccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHH
Confidence 66666666666555666666666665555411 1111122222223333333333333333222211 1
Q ss_pred CCC-EEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEE
Q psy8551 236 RLE-ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHL 314 (581)
Q Consensus 236 ~L~-~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L 314 (581)
.+. .+.-..+.....+...|..+++|+++++++| .++.+.+.+|.+..++++|.+.+| .+..+..++|.++..|+.|
T Consensus 250 sl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN-~i~~i~~~aFe~~a~l~eL~L~~N-~l~~v~~~~f~~ls~L~tL 327 (498)
T KOG4237|consen 250 SLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNN-KITRIEDGAFEGAAELQELYLTRN-KLEFVSSGMFQGLSGLKTL 327 (498)
T ss_pred hHHHhhccccCcCCcChHHHHhhcccceEeccCCC-ccchhhhhhhcchhhhhhhhcCcc-hHHHHHHHhhhccccceee
Confidence 111 1111122233344556888888888888875 788888888999999999999999 7999999999999999999
Q ss_pred ecCCCCCcccc-ccccCCCCcceEEccCCCCccCCchhhHHHHHhhcC-CCceeecCCCcccccccccCCccccccCCCC
Q psy8551 315 NLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRN-TSAVFCNSPAPLKYKSLISLSAEDLGCAGAG 392 (581)
Q Consensus 315 ~l~~~~l~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 392 (581)
++.+|+|+.+. .+|....+|..|.+-.|++.|.|-+.|+..+..... .....|..|...+...+..+...+..+.+..
T Consensus 328 ~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~e 407 (498)
T KOG4237|consen 328 SLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPE 407 (498)
T ss_pred eecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCcc
Confidence 99999999665 467788999999999999999999999998876554 4557788888888777777777777666333
Q ss_pred ccccCcccc--CCCCCCCE-EEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEe
Q psy8551 393 LTNISDNAF--RGLSGLRS-LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 469 (581)
Q Consensus 393 ~~~i~~~~~--~~~~~L~~-L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~ 469 (581)
-........ +.|+.+.+ ...++..+..++++ + -..-.+|.+.+|.++.++.. .+.+| .+++++ +.+..+
T Consensus 408 e~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~-i--P~d~telyl~gn~~~~vp~~---~~~~l-~~dls~-n~i~~L 479 (498)
T KOG4237|consen 408 ELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRG-I--PVDVTELYLDGNAITSVPDE---LLRSL-LLDLSN-NRISSL 479 (498)
T ss_pred ccCCCCCCCCCCCcchhhhhHhhcccchhhcCCC-C--CchhHHHhcccchhcccCHH---HHhhh-hccccc-Cceehh
Confidence 222211111 12333332 33444444444321 1 12345667777777776654 44455 666665 566666
Q ss_pred cCCccCCCCCCCeeeCCCC
Q psy8551 470 RKGAFADNLNLETLTLNKN 488 (581)
Q Consensus 470 ~~~~~~~~~~L~~L~l~~~ 488 (581)
....|.++++|.+|.+++|
T Consensus 480 sn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 480 SNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hcccccchhhhheeEEecC
Confidence 6667788888888877764
No 6
>KOG0472|consensus
Probab=100.00 E-value=9.8e-37 Score=279.00 Aligned_cols=470 Identities=24% Similarity=0.338 Sum_probs=340.7
Q ss_pred cccCCCccCCCCCC---------------cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCccc
Q psy8551 31 LQEANLDVIPSHSN---------------PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLV 95 (581)
Q Consensus 31 ~~~~~l~~ip~~~~---------------~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~ 95 (581)
++++.+.++|..+. -.++++.++.|.++.+.+.+.++..|.++++++|++..+|+ ++..+.+++
T Consensus 16 lsnr~l~~vp~~vyq~~~t~~e~e~wW~qv~l~~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l~~lp~-aig~l~~l~ 94 (565)
T KOG0472|consen 16 LSNRSLKDVPTEVYQINLTTGEGENWWEQVDLQKLILSHNDLEVLREDLKNLACLTVLNVHDNKLSQLPA-AIGELEALK 94 (565)
T ss_pred cccchhhhccHHHHHHHhhccchhhhhhhcchhhhhhccCchhhccHhhhcccceeEEEeccchhhhCCH-HHHHHHHHH
Confidence 35566666666543 36788889999888888888888999999999998888885 577788888
Q ss_pred EEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcc
Q psy8551 96 ELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175 (581)
Q Consensus 96 ~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~ 175 (581)
.+++++|.+ ..+ +.+++...+++.++.+.|.+..++. .++.+..+..++..+|++
T Consensus 95 ~l~vs~n~l-----------------------s~l-p~~i~s~~~l~~l~~s~n~~~el~~-~i~~~~~l~dl~~~~N~i 149 (565)
T KOG0472|consen 95 SLNVSHNKL-----------------------SEL-PEQIGSLISLVKLDCSSNELKELPD-SIGRLLDLEDLDATNNQI 149 (565)
T ss_pred HhhcccchH-----------------------hhc-cHHHhhhhhhhhhhccccceeecCc-hHHHHhhhhhhhcccccc
Confidence 888888763 333 3346677888888888888888877 667788888888888888
Q ss_pred eeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCccc
Q psy8551 176 TTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255 (581)
Q Consensus 176 ~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~ 255 (581)
...++ .+.++.++..+++.+|++...++..+. ++.|++|+...|-++.+|+ .++.+.+|..|++..|++...+ .|
T Consensus 150 ~slp~-~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP~-~lg~l~~L~~LyL~~Nki~~lP--ef 224 (565)
T KOG0472|consen 150 SSLPE-DMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLPP-ELGGLESLELLYLRRNKIRFLP--EF 224 (565)
T ss_pred ccCch-HHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCCh-hhcchhhhHHHHhhhcccccCC--CC
Confidence 88776 467788888888888888888776665 8888888888888888884 5888888888888888888777 37
Q ss_pred CCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccccCCCCcc
Q psy8551 256 KGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELR 335 (581)
Q Consensus 256 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~ 335 (581)
+++..|+++.++.| .+.-+++.....+.++..|++++| .+.++|.. +..+++|.+||+++|.++.+|..++++ .|+
T Consensus 225 ~gcs~L~Elh~g~N-~i~~lpae~~~~L~~l~vLDLRdN-klke~Pde-~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~ 300 (565)
T KOG0472|consen 225 PGCSLLKELHVGEN-QIEMLPAEHLKHLNSLLVLDLRDN-KLKEVPDE-ICLLRSLERLDLSNNDISSLPYSLGNL-HLK 300 (565)
T ss_pred CccHHHHHHHhccc-HHHhhHHHHhcccccceeeecccc-ccccCchH-HHHhhhhhhhcccCCccccCCcccccc-eee
Confidence 88888888888764 566677777778889999999999 78888874 667889999999999999999999988 999
Q ss_pred eEEccCCCCccC------C----chhhHHHHHhhcCCCcee------ecCCCcccccccccCCccccccCCCCccccCcc
Q psy8551 336 TIDIAENPIECG------C----NILWLREMLVRRNTSAVF------CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399 (581)
Q Consensus 336 ~L~l~~~~~~~~------~----~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~ 399 (581)
.|.+.+|++... + ...+++............ .+.+....-......+...+..+...++.++..
T Consensus 301 ~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdE 380 (565)
T KOG0472|consen 301 FLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDE 380 (565)
T ss_pred ehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHH
Confidence 999999987521 1 234444433322222110 111111111112223333344455566666666
Q ss_pred ccCCCC--CCCEEEcCCCcCCccC-----------------------hhhhcCCCCCcEeecCCCcceeeccccccCCcc
Q psy8551 400 AFRGLS--GLRSLVLTDNRLQSIP-----------------------TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454 (581)
Q Consensus 400 ~~~~~~--~L~~L~l~~n~l~~~~-----------------------~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~ 454 (581)
.|+.-+ .++++++++|++.++| +..++.+++|..|++++|-+-+.+.. ++.+.+
T Consensus 381 Vfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~e-~~~lv~ 459 (565)
T KOG0472|consen 381 VFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLPEE-MGSLVR 459 (565)
T ss_pred HHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhcchh-hhhhhh
Confidence 665422 3566667766655443 34456667777777777665555433 455566
Q ss_pred ccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCCcceeeccccccCCcceEEecC
Q psy8551 455 LKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIA 534 (581)
Q Consensus 455 L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~l~ 534 (581)
|+.++++.| .+..+ +..+.....+|.+-.++| +++.++++.+.++.+|+.||+.+|.+..+|+.++++.+|++|++.
T Consensus 460 Lq~LnlS~N-rFr~l-P~~~y~lq~lEtllas~n-qi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~ 536 (565)
T KOG0472|consen 460 LQTLNLSFN-RFRML-PECLYELQTLETLLASNN-QIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELD 536 (565)
T ss_pred hheeccccc-ccccc-hHHHhhHHHHHHHHhccc-cccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEec
Confidence 777777763 33322 222233345555555556 888888888999999999999999999999999999999999999
Q ss_pred CCccc
Q psy8551 535 ENPIE 539 (581)
Q Consensus 535 ~np~~ 539 (581)
||||.
T Consensus 537 gNpfr 541 (565)
T KOG0472|consen 537 GNPFR 541 (565)
T ss_pred CCccC
Confidence 99996
No 7
>KOG0472|consensus
Probab=99.96 E-value=8.2e-34 Score=259.92 Aligned_cols=449 Identities=21% Similarity=0.327 Sum_probs=287.0
Q ss_pred ccCCCccCCCCCC--cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCccc
Q psy8551 32 QEANLDVIPSHSN--PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQI 109 (581)
Q Consensus 32 ~~~~l~~ip~~~~--~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 109 (581)
+++.+..+|..+. ..+..++.+.|++..+|+.+..+..|..+++++|.+..++. .+.++-.|+.++..+|++. ..
T Consensus 76 ~~n~l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~el~~-~i~~~~~l~dl~~~~N~i~--sl 152 (565)
T KOG0472|consen 76 HDNKLSQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELKELPD-SIGRLLDLEDLDATNNQIS--SL 152 (565)
T ss_pred ccchhhhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccceeecCc-hHHHHhhhhhhhccccccc--cC
Confidence 3344444444443 34555666666666666666666666666666666666664 4556666777777777651 12
Q ss_pred ccccCCccccc--ccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCC
Q psy8551 110 VCSIISPRRVE--IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187 (581)
Q Consensus 110 ~~~~~~~~~L~--~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~ 187 (581)
+.++..+.++. .+.+|.+...+++.+. |+.|++||...|.+..+|+ .++.+.+|.-|++..|++...+ .|.+|.
T Consensus 153 p~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP~-~lg~l~~L~~LyL~~Nki~~lP--ef~gcs 228 (565)
T KOG0472|consen 153 PEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLPP-ELGGLESLELLYLRRNKIRFLP--EFPGCS 228 (565)
T ss_pred chHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCCh-hhcchhhhHHHHhhhcccccCC--CCCccH
Confidence 23344444444 5667777777777665 7888888888888877776 6777888888888888877776 477888
Q ss_pred CCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeec
Q psy8551 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 267 (581)
Q Consensus 188 ~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 267 (581)
.|+.+.++.|.+..++......++++..||+++|++++.|. .+..+.+|.+||+++|.++..+.. ++++ .|+.|.+.
T Consensus 229 ~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pd-e~clLrsL~rLDlSNN~is~Lp~s-Lgnl-hL~~L~le 305 (565)
T KOG0472|consen 229 LLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPD-EICLLRSLERLDLSNNDISSLPYS-LGNL-HLKFLALE 305 (565)
T ss_pred HHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCch-HHHHhhhhhhhcccCCccccCCcc-cccc-eeeehhhc
Confidence 88888888887777776666677888888888888888884 355677788888888888776654 6777 77888777
Q ss_pred CCCCceeecCccCCCC-----CCCCE------EeCCCC--CCccccccc---cccCCCCCcEEecCCCCCccccccccCC
Q psy8551 268 GASNLTRVRKGAFADN-----LNLET------LTLNKN--PKLKTIEEG---ALVGLPNLYHLNLKENAFTSFSESMLAW 331 (581)
Q Consensus 268 ~~~~~~~~~~~~~~~~-----~~L~~------L~l~~~--~~~~~~~~~---~~~~~~~L~~L~l~~~~l~~~~~~~~~~ 331 (581)
||+ +..+....+..- +.|+. +.-+.. ....+.+.. ....+.+.+.|++++-+++.+|+.++.-
T Consensus 306 GNP-lrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea 384 (565)
T KOG0472|consen 306 GNP-LRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEA 384 (565)
T ss_pred CCc-hHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHH
Confidence 764 111111111000 00000 000000 000011111 1223456777888888888887755543
Q ss_pred CC---cceEEccCCCCccCCc-hhhHHHHHhhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCC
Q psy8551 332 PE---LRTIDIAENPIECGCN-ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGL 407 (581)
Q Consensus 332 ~~---L~~L~l~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L 407 (581)
.. .+.++++.|++.-... +.-+..+.... ..++ .........+..++.|
T Consensus 385 ~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l--------------------------~lsn-n~isfv~~~l~~l~kL 437 (565)
T KOG0472|consen 385 AKSEIVTSVNFSKNQLCELPKRLVELKELVTDL--------------------------VLSN-NKISFVPLELSQLQKL 437 (565)
T ss_pred hhhcceEEEecccchHhhhhhhhHHHHHHHHHH--------------------------Hhhc-CccccchHHHHhhhcc
Confidence 33 6777788776531110 00011100000 0000 0111222345568899
Q ss_pred CEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCC
Q psy8551 408 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNK 487 (581)
Q Consensus 408 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~ 487 (581)
..|++++|-+-++| ..++.+..|+.|++++|.+...+ .+...+..++.+- ..++++..+.+..+.++.+|.+||+.+
T Consensus 438 t~L~L~NN~Ln~LP-~e~~~lv~Lq~LnlS~NrFr~lP-~~~y~lq~lEtll-as~nqi~~vd~~~l~nm~nL~tLDL~n 514 (565)
T KOG0472|consen 438 TFLDLSNNLLNDLP-EEMGSLVRLQTLNLSFNRFRMLP-ECLYELQTLETLL-ASNNQIGSVDPSGLKNMRNLTTLDLQN 514 (565)
T ss_pred eeeecccchhhhcc-hhhhhhhhhheecccccccccch-HHHhhHHHHHHHH-hccccccccChHHhhhhhhcceeccCC
Confidence 99999999888888 45777888999999999887664 3444444444444 445799999988899999999999999
Q ss_pred CCCceeecCCccCCCCCccEEEcCCCcceeeccccc
Q psy8551 488 NPKLKIIEEDALVGLPNLYHLNLKENAFTSFSESML 523 (581)
Q Consensus 488 ~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~ 523 (581)
| .+..+|+ .+++|.+|++|++.+|.|..-+..+.
T Consensus 515 N-dlq~IPp-~LgnmtnL~hLeL~gNpfr~Pr~~iL 548 (565)
T KOG0472|consen 515 N-DLQQIPP-ILGNMTNLRHLELDGNPFRQPRHQIL 548 (565)
T ss_pred C-chhhCCh-hhccccceeEEEecCCccCCCHHHHh
Confidence 9 8999975 48999999999999999995444443
No 8
>KOG4237|consensus
Probab=99.96 E-value=2.4e-31 Score=243.41 Aligned_cols=344 Identities=29% Similarity=0.517 Sum_probs=262.3
Q ss_pred EcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCc
Q psy8551 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272 (581)
Q Consensus 193 ~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 272 (581)
+-++-+++.++. .+ .+.-..+.|..|+|+.+|+++|+.+++|+.|+++.|.|+.+.+..|.+++.+..|.+.+++.+
T Consensus 52 dCr~~GL~eVP~-~L--P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 52 DCRGKGLTEVPA-NL--PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred EccCCCcccCcc-cC--CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 334444555543 12 246778999999999999999999999999999999999999999999999999999998899
Q ss_pred eeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccc-cccCCCCcceEEccCCCCccCCchh
Q psy8551 273 TRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNIL 351 (581)
Q Consensus 273 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~ 351 (581)
++++...|.++.+++.|.+..| .+.-+....|..++++..|.+.+|.+..++. .+..+..++.+.+..|++.|+|...
T Consensus 129 ~~l~k~~F~gL~slqrLllNan-~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNAN-HINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChh-hhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccc
Confidence 9999999999999999999888 6888888889999999999999999998887 7778899999999999999999999
Q ss_pred hHHHHHhhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChhhhcC-CCC
Q psy8551 352 WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK-LTR 430 (581)
Q Consensus 352 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~-l~~ 430 (581)
|+........+ .+++.+...-..+.+..+..+..+.|.. ..+
T Consensus 208 wla~~~a~~~i-------------------------------------etsgarc~~p~rl~~~Ri~q~~a~kf~c~~es 250 (498)
T KOG4237|consen 208 WLADDLAMNPI-------------------------------------ETSGARCVSPYRLYYKRINQEDARKFLCSLES 250 (498)
T ss_pred hhhhHHhhchh-------------------------------------hcccceecchHHHHHHHhcccchhhhhhhHHh
Confidence 98765432211 1222222222223333333222222211 111
Q ss_pred CcEeecCCC-cceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEE
Q psy8551 431 LEELEIGQN-GFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLN 509 (581)
Q Consensus 431 L~~L~l~~~-~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~ 509 (581)
+.+=-.+.+ .....+..+|..++.|++|++++ +.++.+...+|.+...+++|.+..| .+..+....|.++..|+.|+
T Consensus 251 l~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsn-N~i~~i~~~aFe~~a~l~eL~L~~N-~l~~v~~~~f~~ls~L~tL~ 328 (498)
T KOG4237|consen 251 LPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSN-NKITRIEDGAFEGAAELQELYLTRN-KLEFVSSGMFQGLSGLKTLS 328 (498)
T ss_pred HHHhhccccCcCCcChHHHHhhcccceEeccCC-CccchhhhhhhcchhhhhhhhcCcc-hHHHHHHHhhhccccceeee
Confidence 111011112 12223344566777777777766 5777777777888888888888888 88888888899999999999
Q ss_pred cCCCcceee-ccccccCCcceEEecCCCcccccCchhHHHHHHhhcC-CCceeeCCCcccccccccccCccc
Q psy8551 510 LKENAFTSF-SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRN-TSAVFCNSPAPLKYKSLISLSAED 579 (581)
Q Consensus 510 l~~n~l~~l-~~~~~~~~~L~~L~l~~np~~c~c~~~~~~~~~~~~~-~~~~~c~~~~~~~~~~~~~~~~~~ 579 (581)
+++|+|+.+ |..+....+|.+|++-+|||.|+|.+.|+.+|++... ....+|++|.++++.++.|++-.|
T Consensus 329 L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~ 400 (498)
T KOG4237|consen 329 LYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGD 400 (498)
T ss_pred ecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccc
Confidence 999999976 4566678999999999999999999999999998864 445589999999999999987543
No 9
>KOG0444|consensus
Probab=99.95 E-value=5.9e-31 Score=253.92 Aligned_cols=364 Identities=23% Similarity=0.369 Sum_probs=235.2
Q ss_pred CcCccEEEcccCCcc--cccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccc
Q psy8551 44 NPSIQRLVLSTNRIK--TVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEI 121 (581)
Q Consensus 44 ~~~l~~L~L~~~~i~--~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~ 121 (581)
.|-++-+|+++|.+. .+|..+..+++++-|.|...++..+| +.+.++.+|++|.+++|++
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~vP-eEL~~lqkLEHLs~~HN~L----------------- 67 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQVP-EELSRLQKLEHLSMAHNQL----------------- 67 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhCh-HHHHHHhhhhhhhhhhhhh-----------------
Confidence 355667777777776 56777777777777777777777777 3577777777777777753
Q ss_pred cCcccccccchhhcCCCCCCcEEeCCCCcCc--ccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCc
Q psy8551 122 FGQNRISRIDQACFEGLTALRILYLDDNQLR--SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199 (581)
Q Consensus 122 l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~--~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l 199 (581)
..+ ...+..++.|+.+.+.+|++. ++|.+ +-.+..|..|+|+.|++...+. .+..-+++-.|+|++|++
T Consensus 68 ------~~v-hGELs~Lp~LRsv~~R~N~LKnsGiP~d-iF~l~dLt~lDLShNqL~EvP~-~LE~AKn~iVLNLS~N~I 138 (1255)
T KOG0444|consen 68 ------ISV-HGELSDLPRLRSVIVRDNNLKNSGIPTD-IFRLKDLTILDLSHNQLREVPT-NLEYAKNSIVLNLSYNNI 138 (1255)
T ss_pred ------Hhh-hhhhccchhhHHHhhhccccccCCCCch-hcccccceeeecchhhhhhcch-hhhhhcCcEEEEcccCcc
Confidence 111 112556677777777777654 45553 3356777777777777766654 355556677777777777
Q ss_pred cccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCcc
Q psy8551 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 279 (581)
Q Consensus 200 ~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 279 (581)
..++...|.++..|-+|+|++|++..+|+ .+..+.+|++|++++|.+.......++.+++|
T Consensus 139 etIPn~lfinLtDLLfLDLS~NrLe~LPP-Q~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL------------------ 199 (1255)
T KOG0444|consen 139 ETIPNSLFINLTDLLFLDLSNNRLEMLPP-QIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSL------------------ 199 (1255)
T ss_pred ccCCchHHHhhHhHhhhccccchhhhcCH-HHHHHhhhhhhhcCCChhhHHHHhcCccchhh------------------
Confidence 77777667777777788888888888875 46777888888888887664433333333333
Q ss_pred CCCCCCCCEEeCCCCCCc-cccccccccCCCCCcEEecCCCCCccccccccCCCCcceEEccCCCCccCCchhhHHHHHh
Q psy8551 280 FADNLNLETLTLNKNPKL-KTIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLV 358 (581)
Q Consensus 280 ~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~ 358 (581)
+.|.+++.... ..+|. .+..+.+|..++++.|.+..+|+.+..+++|+.|++++|.+.-.
T Consensus 200 -------~vLhms~TqRTl~N~Pt-sld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL----------- 260 (1255)
T KOG0444|consen 200 -------SVLHMSNTQRTLDNIPT-SLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITEL----------- 260 (1255)
T ss_pred -------hhhhcccccchhhcCCC-chhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeee-----------
Confidence 33444433222 23333 57778888888888888888888888877777777777765310
Q ss_pred hcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCC
Q psy8551 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438 (581)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 438 (581)
. .......+|++|++++|+++.+| .++..++.|+.|...+
T Consensus 261 --------------------------------------~-~~~~~W~~lEtLNlSrNQLt~LP-~avcKL~kL~kLy~n~ 300 (1255)
T KOG0444|consen 261 --------------------------------------N-MTEGEWENLETLNLSRNQLTVLP-DAVCKLTKLTKLYANN 300 (1255)
T ss_pred --------------------------------------e-ccHHHHhhhhhhccccchhccch-HHHhhhHHHHHHHhcc
Confidence 0 00111355666677777666655 4566666666666655
Q ss_pred CcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCCcceee
Q psy8551 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSF 518 (581)
Q Consensus 439 ~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l 518 (581)
|+++- .-.+..++.+.+|+.+..++| .++-+ |+++..|+.|+.|.++.|++..+
T Consensus 301 NkL~F------------------------eGiPSGIGKL~~Levf~aanN-~LElV-PEglcRC~kL~kL~L~~NrLiTL 354 (1255)
T KOG0444|consen 301 NKLTF------------------------EGIPSGIGKLIQLEVFHAANN-KLELV-PEGLCRCVKLQKLKLDHNRLITL 354 (1255)
T ss_pred Ccccc------------------------cCCccchhhhhhhHHHHhhcc-ccccC-chhhhhhHHHHHhcccccceeec
Confidence 55441 112334555556666666666 55555 35566677777777777777777
Q ss_pred ccccccCCcceEEecCCCcc
Q psy8551 519 SESMLAWPELRTIDIAENPI 538 (581)
Q Consensus 519 ~~~~~~~~~L~~L~l~~np~ 538 (581)
|+.+.-++.|..||+..||-
T Consensus 355 PeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 355 PEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred hhhhhhcCCcceeeccCCcC
Confidence 77666667777777776665
No 10
>KOG0618|consensus
Probab=99.94 E-value=5.8e-29 Score=250.91 Aligned_cols=457 Identities=23% Similarity=0.283 Sum_probs=288.5
Q ss_pred ccCCCccCCCCCC--cCccEEEcccCCcccccc-cccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcc
Q psy8551 32 QEANLDVIPSHSN--PSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQ 108 (581)
Q Consensus 32 ~~~~l~~ip~~~~--~~l~~L~L~~~~i~~l~~-~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 108 (581)
++-.++-||..+. ..+..|+++.|-+-..|- .+.+.-+|+.||+++|.+...|. .+..+++|+.|+++.|.+- .
T Consensus 6 s~~~l~~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~~fp~-~it~l~~L~~ln~s~n~i~--~ 82 (1081)
T KOG0618|consen 6 SDEQLELIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQISSFPI-QITLLSHLRQLNLSRNYIR--S 82 (1081)
T ss_pred ccccCcccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccccCCc-hhhhHHHHhhcccchhhHh--h
Confidence 4467778888765 358888888887776553 44556669999999999888884 5777889999999998761 1
Q ss_pred cccccCCccccc--ccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCC-------------
Q psy8551 109 IVCSIISPRRVE--IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN------------- 173 (581)
Q Consensus 109 ~~~~~~~~~~L~--~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n------------- 173 (581)
++.++.....|+ .|.+|.++..+ ..+..+.+|++|+++.|.+..+|. .+..+..+..+..++|
T Consensus 83 vp~s~~~~~~l~~lnL~~n~l~~lP-~~~~~lknl~~LdlS~N~f~~~Pl-~i~~lt~~~~~~~s~N~~~~~lg~~~ik~ 160 (1081)
T KOG0618|consen 83 VPSSCSNMRNLQYLNLKNNRLQSLP-ASISELKNLQYLDLSFNHFGPIPL-VIEVLTAEEELAASNNEKIQRLGQTSIKK 160 (1081)
T ss_pred CchhhhhhhcchhheeccchhhcCc-hhHHhhhcccccccchhccCCCch-hHHhhhHHHHHhhhcchhhhhhccccchh
Confidence 113444455666 44555555544 346777777777777777777665 4444555555555555
Q ss_pred ------cceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcc
Q psy8551 174 ------VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247 (581)
Q Consensus 174 ------~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~ 247 (581)
.+.+-....+..+++ .|++++|.+. . ..+..+++|+.|....|+++.+.. .-++++.|....|.+
T Consensus 161 ~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~~----~g~~l~~L~a~~n~l 231 (1081)
T KOG0618|consen 161 LDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELEI----SGPSLTALYADHNPL 231 (1081)
T ss_pred hhhhhhhcccchhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceEEe----cCcchheeeeccCcc
Confidence 111111111111222 2444444443 1 123334444444444444443321 124555555555555
Q ss_pred cccCCcccCCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCcccccc
Q psy8551 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSES 327 (581)
Q Consensus 248 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~ 327 (581)
+.... -+.-.+|+.++++.+ .+..++ .++..+.+|+.+....| .+..++. .+....+|+.+++..|.+..+|+.
T Consensus 232 ~~~~~--~p~p~nl~~~dis~n-~l~~lp-~wi~~~~nle~l~~n~N-~l~~lp~-ri~~~~~L~~l~~~~nel~yip~~ 305 (1081)
T KOG0618|consen 232 TTLDV--HPVPLNLQYLDISHN-NLSNLP-EWIGACANLEALNANHN-RLVALPL-RISRITSLVSLSAAYNELEYIPPF 305 (1081)
T ss_pred eeecc--ccccccceeeecchh-hhhcch-HHHHhcccceEecccch-hHHhhHH-HHhhhhhHHHHHhhhhhhhhCCCc
Confidence 52222 122245677777664 444555 66777777888877777 4555655 355667778888888888888887
Q ss_pred ccCCCCcceEEccCCCCccCCchhhHHHHHhhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCC
Q psy8551 328 MLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGL 407 (581)
Q Consensus 328 ~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L 407 (581)
..+.++|+.|++..|.+..... ..+....... ..+..+...+...+...-...+.|
T Consensus 306 le~~~sL~tLdL~~N~L~~lp~-~~l~v~~~~l-----------------------~~ln~s~n~l~~lp~~~e~~~~~L 361 (1081)
T KOG0618|consen 306 LEGLKSLRTLDLQSNNLPSLPD-NFLAVLNASL-----------------------NTLNVSSNKLSTLPSYEENNHAAL 361 (1081)
T ss_pred ccccceeeeeeehhccccccch-HHHhhhhHHH-----------------------HHHhhhhccccccccccchhhHHH
Confidence 7778889999998888764333 1111100000 001111111111111111125668
Q ss_pred CEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCC
Q psy8551 408 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNK 487 (581)
Q Consensus 408 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~ 487 (581)
+.|.+.+|.+++.....+-.+..|+.|++++|++...+...+.++..|++|+++| +.++.++ ..+.++..|++|...+
T Consensus 362 q~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSG-NkL~~Lp-~tva~~~~L~tL~ahs 439 (1081)
T KOG0618|consen 362 QELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSG-NKLTTLP-DTVANLGRLHTLRAHS 439 (1081)
T ss_pred HHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhccc-chhhhhh-HHHHhhhhhHHHhhcC
Confidence 8888888888876555677888888888888888888888888888888888888 5777775 6677888899998888
Q ss_pred CCCceeecCCccCCCCCccEEEcCCCccee--eccccccCCcceEEecCCCcc
Q psy8551 488 NPKLKIIEEDALVGLPNLYHLNLKENAFTS--FSESMLAWPELRTIDIAENPI 538 (581)
Q Consensus 488 ~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--l~~~~~~~~~L~~L~l~~np~ 538 (581)
| ++...| .+..++.|+.+|++.|.|+. +++. ...+.|++||++||++
T Consensus 440 N-~l~~fP--e~~~l~qL~~lDlS~N~L~~~~l~~~-~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 440 N-QLLSFP--ELAQLPQLKVLDLSCNNLSEVTLPEA-LPSPNLKYLDLSGNTR 488 (1081)
T ss_pred C-ceeech--hhhhcCcceEEecccchhhhhhhhhh-CCCcccceeeccCCcc
Confidence 8 788776 37888999999999998884 3433 3348899999999986
No 11
>KOG0444|consensus
Probab=99.93 E-value=1.4e-28 Score=237.57 Aligned_cols=350 Identities=21% Similarity=0.355 Sum_probs=267.9
Q ss_pred cCCCCCC--cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCC
Q psy8551 38 VIPSHSN--PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIIS 115 (581)
Q Consensus 38 ~ip~~~~--~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 115 (581)
..|.++. ..++.|.|..+++.++|+.++.+.+|++|.+++|++.++- ..+..++.|+.+++..|++...+++..+..
T Consensus 23 ~FP~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vh-GELs~Lp~LRsv~~R~N~LKnsGiP~diF~ 101 (1255)
T KOG0444|consen 23 RFPHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISVH-GELSDLPRLRSVIVRDNNLKNSGIPTDIFR 101 (1255)
T ss_pred cCchhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhhh-hhhccchhhHHHhhhccccccCCCCchhcc
Confidence 4455443 7899999999999999999999999999999999998887 468899999999999999877777778877
Q ss_pred ccccc--ccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEE
Q psy8551 116 PRRVE--IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193 (581)
Q Consensus 116 ~~~L~--~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~ 193 (581)
+..|+ +|+.|++.+.+.. +...+++-.|++++|+|..+|...|.++..|-.|+|++|.+...++. +..+..|++|+
T Consensus 102 l~dLt~lDLShNqL~EvP~~-LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ-~RRL~~LqtL~ 179 (1255)
T KOG0444|consen 102 LKDLTILDLSHNQLREVPTN-LEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQ-IRRLSMLQTLK 179 (1255)
T ss_pred cccceeeecchhhhhhcchh-hhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHH-HHHHhhhhhhh
Confidence 77777 7888888887654 77788888899999999988888888888888899999888888774 67788888889
Q ss_pred cCCCCccccCccccCCCCCCcEEECCCCcCC--ccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCC
Q psy8551 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ--SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271 (581)
Q Consensus 194 L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 271 (581)
|++|.+.......+..+.+|+.|.+++++-+ .+| ..+..+.+|..++++.|.+..++. .+..+++|+.|++++| .
T Consensus 180 Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~P-tsld~l~NL~dvDlS~N~Lp~vPe-cly~l~~LrrLNLS~N-~ 256 (1255)
T KOG0444|consen 180 LSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIP-TSLDDLHNLRDVDLSENNLPIVPE-CLYKLRNLRRLNLSGN-K 256 (1255)
T ss_pred cCCChhhHHHHhcCccchhhhhhhcccccchhhcCC-CchhhhhhhhhccccccCCCcchH-HHhhhhhhheeccCcC-c
Confidence 9888877655555666777888888887654 555 467778888888888888776654 4667788888888875 3
Q ss_pred ceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCc--cccccccCCCCcceEEccCCCCccCCc
Q psy8551 272 LTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCN 349 (581)
Q Consensus 272 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~--~~~~~~~~~~~L~~L~l~~~~~~~~~~ 349 (581)
++..... ...-.+|++|++++| .++.+|. ++..++.|++|.+.+|+++ ++|+.++.+..|+.+...+|.+.
T Consensus 257 iteL~~~-~~~W~~lEtLNlSrN-QLt~LP~-avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE---- 329 (1255)
T KOG0444|consen 257 ITELNMT-EGEWENLETLNLSRN-QLTVLPD-AVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE---- 329 (1255)
T ss_pred eeeeecc-HHHHhhhhhhccccc-hhccchH-HHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc----
Confidence 3333221 122246777777777 5666665 5667777777777777655 67777777777777777766543
Q ss_pred hhhHHHHHhhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChhhhcCCC
Q psy8551 350 ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429 (581)
Q Consensus 350 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~ 429 (581)
+-+..+..|..|++|.+++|.+..+| +.+--++
T Consensus 330 ----------------------------------------------lVPEglcRC~kL~kL~L~~NrLiTLP-eaIHlL~ 362 (1255)
T KOG0444|consen 330 ----------------------------------------------LVPEGLCRCVKLQKLKLDHNRLITLP-EAIHLLP 362 (1255)
T ss_pred ----------------------------------------------cCchhhhhhHHHHHhcccccceeech-hhhhhcC
Confidence 23445667888999999999888776 6777888
Q ss_pred CCcEeecCCCcceeeccc
Q psy8551 430 RLEELEIGQNGFSMLEAG 447 (581)
Q Consensus 430 ~L~~L~l~~~~i~~~~~~ 447 (581)
.|+.|++..|.-..++|.
T Consensus 363 ~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 363 DLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred CcceeeccCCcCccCCCC
Confidence 899999988754444443
No 12
>KOG0618|consensus
Probab=99.92 E-value=3.9e-27 Score=237.85 Aligned_cols=437 Identities=23% Similarity=0.276 Sum_probs=268.6
Q ss_pred ccCCCccCCCCCC--cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCccc
Q psy8551 32 QEANLDVIPSHSN--PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQI 109 (581)
Q Consensus 32 ~~~~l~~ip~~~~--~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 109 (581)
+++.+...|..+. ++|+.|+++.|.|..+|....++.+|+++.|.+|.+..+|. .+..+++|++|++++|.+.+...
T Consensus 53 snn~~~~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n~l~~lP~-~~~~lknl~~LdlS~N~f~~~Pl 131 (1081)
T KOG0618|consen 53 SNNQISSFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNNRLQSLPA-SISELKNLQYLDLSFNHFGPIPL 131 (1081)
T ss_pred cccccccCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheeccchhhcCch-hHHhhhcccccccchhccCCCch
Confidence 6677777766554 67888888888888888777788888888888887777773 57777788888888777622211
Q ss_pred ccccCCc-----------------cccc--ccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEEC
Q psy8551 110 VCSIISP-----------------RRVE--IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170 (581)
Q Consensus 110 ~~~~~~~-----------------~~L~--~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L 170 (581)
.-..... ..++ ++..|.+..........+.. .|++..|.+... .+..+.+|+.|..
T Consensus 132 ~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---dls~~~~l~~l~c 206 (1081)
T KOG0618|consen 132 VIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---DLSNLANLEVLHC 206 (1081)
T ss_pred hHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---hhhhccchhhhhh
Confidence 1000000 0011 33333333322222222222 366666655511 2444556666666
Q ss_pred CCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCccccc
Q psy8551 171 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250 (581)
Q Consensus 171 ~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~ 250 (581)
..|.+..+.- ..++|+.|+...|.++..... ....+|++++++.++++.+| +++..+.+|+.++...|.++.+
T Consensus 207 ~rn~ls~l~~----~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~~l 279 (1081)
T KOG0618|consen 207 ERNQLSELEI----SGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLVAL 279 (1081)
T ss_pred hhcccceEEe----cCcchheeeeccCcceeeccc--cccccceeeecchhhhhcch-HHHHhcccceEecccchhHHhh
Confidence 6655554321 335666666666666633321 22346777777777777777 6777777777777777777655
Q ss_pred CCcccCCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCC-CcEEecCCCCCcccccc-c
Q psy8551 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPN-LYHLNLKENAFTSFSES-M 328 (581)
Q Consensus 251 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~-L~~L~l~~~~l~~~~~~-~ 328 (581)
+.. .....+|+.+.+..| .+..+++ ...+.++|++|++..| .+...|...+.-... +..++.+.+.+...|.. -
T Consensus 280 p~r-i~~~~~L~~l~~~~n-el~yip~-~le~~~sL~tLdL~~N-~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e 355 (1081)
T KOG0618|consen 280 PLR-ISRITSLVSLSAAYN-ELEYIPP-FLEGLKSLRTLDLQSN-NLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEE 355 (1081)
T ss_pred HHH-HhhhhhHHHHHhhhh-hhhhCCC-cccccceeeeeeehhc-cccccchHHHhhhhHHHHHHhhhhccccccccccc
Confidence 544 233455555555443 2333333 1233455666666665 455555433333332 44555555555444421 1
Q ss_pred cCCCCcceEEccCCCCccCCchhhHHHHHhhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCC
Q psy8551 329 LAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLR 408 (581)
Q Consensus 329 ~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~ 408 (581)
...+.|+.|.+.+|.+. +-....+.++++|+
T Consensus 356 ~~~~~Lq~LylanN~Lt-------------------------------------------------d~c~p~l~~~~hLK 386 (1081)
T KOG0618|consen 356 NNHAALQELYLANNHLT-------------------------------------------------DSCFPVLVNFKHLK 386 (1081)
T ss_pred hhhHHHHHHHHhcCccc-------------------------------------------------ccchhhhcccccee
Confidence 12345555555555543 22233456789999
Q ss_pred EEEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCC
Q psy8551 409 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKN 488 (581)
Q Consensus 409 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~ 488 (581)
.|+|++|.+.+++...+.+++.|++|++++|+++.++ .....+..|+.|...+ +.+...+ .+..++.|+.+|++.|
T Consensus 387 VLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp-~tva~~~~L~tL~ahs-N~l~~fP--e~~~l~qL~~lDlS~N 462 (1081)
T KOG0618|consen 387 VLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLP-DTVANLGRLHTLRAHS-NQLLSFP--ELAQLPQLKVLDLSCN 462 (1081)
T ss_pred eeeecccccccCCHHHHhchHHhHHHhcccchhhhhh-HHHHhhhhhHHHhhcC-Cceeech--hhhhcCcceEEecccc
Confidence 9999999999999999999999999999999999886 6678899999999877 5666665 6888999999999999
Q ss_pred CCceeecCCccCCCCCccEEEcCCCcceeec-cccccCCcceEEecCCCccc
Q psy8551 489 PKLKIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIE 539 (581)
Q Consensus 489 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~-~~~~~~~~L~~L~l~~np~~ 539 (581)
.++.+....-..-++|++||+++|.=..+. ..+..+..+...++.-++..
T Consensus 463 -~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~~~~ 513 (1081)
T KOG0618|consen 463 -NLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLNNTP 513 (1081)
T ss_pred -hhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccCCCC
Confidence 665543222222279999999999733222 34555666666666655443
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=2.6e-21 Score=217.92 Aligned_cols=346 Identities=23% Similarity=0.325 Sum_probs=244.0
Q ss_pred cchhhcCCCCCCcEEeCCCCcCc-------ccCCcccccC-ccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccc
Q psy8551 130 IDQACFEGLTALRILYLDDNQLR-------SVPTPSFIYL-GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201 (581)
Q Consensus 130 ~~~~~l~~~~~L~~L~l~~~~i~-------~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~ 201 (581)
+...+|.+|++|+.|.+..+... .++. .+..+ .+|+.|.+.++.+..++.. + ...+|+.|++.++.+..
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~-~~~~lp~~Lr~L~~~~~~l~~lP~~-f-~~~~L~~L~L~~s~l~~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPE-GFDYLPPKLRLLRWDKYPLRCMPSN-F-RPENLVKLQMQGSKLEK 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCc-chhhcCcccEEEEecCCCCCCCCCc-C-CccCCcEEECcCccccc
Confidence 45667888899999888655322 1222 34443 4688888888887777653 3 46788888888888776
Q ss_pred cCccccCCCCCCcEEECCCCc-CCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccC
Q psy8551 202 ISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280 (581)
Q Consensus 202 ~~~~~l~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 280 (581)
+.. .+..+++|+.|+++++. +..+| .+..+++|++|++++|......+..+..+++|+.|++.+|..+..++...
T Consensus 626 L~~-~~~~l~~Lk~L~Ls~~~~l~~ip--~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i- 701 (1153)
T PLN03210 626 LWD-GVHSLTGLRNIDLRGSKNLKEIP--DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI- 701 (1153)
T ss_pred ccc-ccccCCCCCEEECCCCCCcCcCC--ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-
Confidence 543 45678888899988764 55555 37778888889888875444444557788888888888888777776543
Q ss_pred CCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccccCCCCcceEEccCCCCccCCchhhHHHHHhhc
Q psy8551 281 ADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRR 360 (581)
Q Consensus 281 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~ 360 (581)
++++|+.|++++|..+..++. ...+|+.|++.++.+..+|..+ .+++|++|.+.++..... |
T Consensus 702 -~l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~~lP~~~-~l~~L~~L~l~~~~~~~l----~-------- 763 (1153)
T PLN03210 702 -NLKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSEKL----W-------- 763 (1153)
T ss_pred -CCCCCCEEeCCCCCCcccccc----ccCCcCeeecCCCccccccccc-cccccccccccccchhhc----c--------
Confidence 577888888888866665553 2357888888888888777654 467777777765431100 0
Q ss_pred CCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCc
Q psy8551 361 NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440 (581)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~ 440 (581)
..+..+....+...++|+.|++++|......|..+..+++|+.|++++|.
T Consensus 764 ------------------------------~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~ 813 (1153)
T PLN03210 764 ------------------------------ERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCI 813 (1153)
T ss_pred ------------------------------ccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCC
Confidence 00000111112235789999999986554445678899999999998874
Q ss_pred -ceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCCc-ceee
Q psy8551 441 -FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENA-FTSF 518 (581)
Q Consensus 441 -i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~-l~~l 518 (581)
+..+ |... .+++|+.|++++|..+..++. ...+|+.|++++| .++.+| .++..+++|+.|++++|+ ++.+
T Consensus 814 ~L~~L-P~~~-~L~sL~~L~Ls~c~~L~~~p~----~~~nL~~L~Ls~n-~i~~iP-~si~~l~~L~~L~L~~C~~L~~l 885 (1153)
T PLN03210 814 NLETL-PTGI-NLESLESLDLSGCSRLRTFPD----ISTNISDLNLSRT-GIEEVP-WWIEKFSNLSFLDMNGCNNLQRV 885 (1153)
T ss_pred CcCee-CCCC-CccccCEEECCCCCccccccc----cccccCEeECCCC-CCccCh-HHHhcCCCCCEEECCCCCCcCcc
Confidence 4444 3333 688999999999887765532 2358999999998 777775 568889999999999875 8888
Q ss_pred ccccccCCcceEEecCCCcc
Q psy8551 519 SESMLAWPELRTIDIAENPI 538 (581)
Q Consensus 519 ~~~~~~~~~L~~L~l~~np~ 538 (581)
|..+..+++|+.+++++|+-
T Consensus 886 ~~~~~~L~~L~~L~l~~C~~ 905 (1153)
T PLN03210 886 SLNISKLKHLETVDFSDCGA 905 (1153)
T ss_pred CcccccccCCCeeecCCCcc
Confidence 88788888888889888864
No 14
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.84 E-value=2.2e-19 Score=202.55 Aligned_cols=316 Identities=20% Similarity=0.261 Sum_probs=214.4
Q ss_pred CCcccccCccCcEEECCCCcc------eeccCCcCCCC-CCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccC
Q psy8551 155 PTPSFIYLGMLAELRVGLNVF------TTLADGAFNGL-GRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227 (581)
Q Consensus 155 ~~~~~~~~~~L~~L~L~~n~~------~~~~~~~l~~l-~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~ 227 (581)
...+|.++.+|+.|.+..+.. ....+..+..+ .+|+.|.+.++.+..++.. + ...+|+.|++.++++..++
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~-f-~~~~L~~L~L~~s~l~~L~ 627 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSN-F-RPENLVKLQMQGSKLEKLW 627 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCc-C-CccCCcEEECcCccccccc
Confidence 344577777888877755432 11122234443 3577777777776666542 3 3567777888777777666
Q ss_pred ccccCCCCCCCEEECCCCc-ccccCCcccCCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCcccccccccc
Q psy8551 228 TKQLSKLTRLEELEIGQNG-FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALV 306 (581)
Q Consensus 228 ~~~~~~l~~L~~L~l~~~~-~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 306 (581)
..+..+++|+.++++++. +..++ .+..+++|+.|++.+|..+..++. .+..+++|+.|++++|..++.+|.. +
T Consensus 628 -~~~~~l~~Lk~L~Ls~~~~l~~ip--~ls~l~~Le~L~L~~c~~L~~lp~-si~~L~~L~~L~L~~c~~L~~Lp~~-i- 701 (1153)
T PLN03210 628 -DGVHSLTGLRNIDLRGSKNLKEIP--DLSMATNLETLKLSDCSSLVELPS-SIQYLNKLEDLDMSRCENLEILPTG-I- 701 (1153)
T ss_pred -cccccCCCCCEEECCCCCCcCcCC--ccccCCcccEEEecCCCCccccch-hhhccCCCCEEeCCCCCCcCccCCc-C-
Confidence 345667777777777654 33333 255667777777777766655543 3566677777777777666666653 2
Q ss_pred CCCCCcEEecCCCCCc-cccccccCCCCcceEEccCCCCccCCchhhHHHHHhhcCCCceeecCCCcccccccccCCccc
Q psy8551 307 GLPNLYHLNLKENAFT-SFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385 (581)
Q Consensus 307 ~~~~L~~L~l~~~~l~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 385 (581)
.+++|+.|++++|... .+|.. ..+|++|+++++.+.
T Consensus 702 ~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~---------------------------------------- 738 (1153)
T PLN03210 702 NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE---------------------------------------- 738 (1153)
T ss_pred CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc----------------------------------------
Confidence 5677777777776432 33321 346677777766542
Q ss_pred cccCCCCccccCccccCCCCCCCEEEcCCCcC-------CccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEE
Q psy8551 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL-------QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458 (581)
Q Consensus 386 ~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l-------~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L 458 (581)
.++.. + .+++|++|.+.++.. ..+.+......++|++|++++|......|..+..+++|+.|
T Consensus 739 ---------~lP~~-~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L 807 (1153)
T PLN03210 739 ---------EFPSN-L-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHL 807 (1153)
T ss_pred ---------ccccc-c-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEE
Confidence 11111 1 256677777765322 12222233446789999999997776677789999999999
Q ss_pred eecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCCcceeeccccccCCcceEEecCCCcc
Q psy8551 459 EITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 538 (581)
Q Consensus 459 ~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~l~~np~ 538 (581)
++++|+.+..++... ++++|+.|++++|..+..++. ..++|++|++++|.++.+|.++..+++|++|++++|+-
T Consensus 808 ~Ls~C~~L~~LP~~~--~L~sL~~L~Ls~c~~L~~~p~----~~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~C~~ 881 (1153)
T PLN03210 808 EIENCINLETLPTGI--NLESLESLDLSGCSRLRTFPD----ISTNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNN 881 (1153)
T ss_pred ECCCCCCcCeeCCCC--CccccCEEECCCCCccccccc----cccccCEeECCCCCCccChHHHhcCCCCCEEECCCCCC
Confidence 999999998876543 689999999999988887753 24689999999999999999999999999999999643
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=1.6e-19 Score=188.84 Aligned_cols=265 Identities=25% Similarity=0.288 Sum_probs=193.5
Q ss_pred CCCCCCCccCCCccccccCCCccCCCCCCcCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCccc
Q psy8551 16 PYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLV 95 (581)
Q Consensus 16 ~c~~~~~~~~~~~c~~~~~~l~~ip~~~~~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~ 95 (581)
.+.|.......+.| ++..++++|..++++++.|++.+|+++.+|. ..++|++|++++|+++.+|.. .++|+
T Consensus 195 ~~~Cl~~~~~~LdL--s~~~LtsLP~~l~~~L~~L~L~~N~Lt~LP~---lp~~Lk~LdLs~N~LtsLP~l----p~sL~ 265 (788)
T PRK15387 195 MRACLNNGNAVLNV--GESGLTTLPDCLPAHITTLVIPDNNLTSLPA---LPPELRTLEVSGNQLTSLPVL----PPGLL 265 (788)
T ss_pred HHHHhcCCCcEEEc--CCCCCCcCCcchhcCCCEEEccCCcCCCCCC---CCCCCcEEEecCCccCcccCc----ccccc
Confidence 34454434455677 8899999999999999999999999999986 358999999999999988742 36899
Q ss_pred EEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcc
Q psy8551 96 ELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175 (581)
Q Consensus 96 ~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~ 175 (581)
+|++++|.+ +.++. ...+|+.|++++|+++.++. .+++|+.|++++|.+
T Consensus 266 ~L~Ls~N~L-----------------------~~Lp~----lp~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L 314 (788)
T PRK15387 266 ELSIFSNPL-----------------------THLPA----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQL 314 (788)
T ss_pred eeeccCCch-----------------------hhhhh----chhhcCEEECcCCccccccc----cccccceeECCCCcc
Confidence 999999864 22211 12457778888888877764 246788888888877
Q ss_pred eeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCccc
Q psy8551 176 TTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255 (581)
Q Consensus 176 ~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~ 255 (581)
..++. ....|+.|++.+|.++.++. + ..+|+.|++++|+++.+|.. .++|+.|++++|.+..++..
T Consensus 315 ~~Lp~----lp~~L~~L~Ls~N~L~~LP~--l--p~~Lq~LdLS~N~Ls~LP~l----p~~L~~L~Ls~N~L~~LP~l-- 380 (788)
T PRK15387 315 ASLPA----LPSELCKLWAYNNQLTSLPT--L--PSGLQELSVSDNQLASLPTL----PSELYKLWAYNNRLTSLPAL-- 380 (788)
T ss_pred ccCCC----CcccccccccccCccccccc--c--ccccceEecCCCccCCCCCC----CcccceehhhccccccCccc--
Confidence 76643 12357777788887776542 1 24688888888888877641 24677788888877765432
Q ss_pred CCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccccCCCCcc
Q psy8551 256 KGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELR 335 (581)
Q Consensus 256 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~ 335 (581)
...|+.|++++| .+..++.. ..+|+.|++++| .+..+|.. ..+|+.|++++|+++.+|..+..++.|+
T Consensus 381 --~~~L~~LdLs~N-~Lt~LP~l----~s~L~~LdLS~N-~LssIP~l----~~~L~~L~Ls~NqLt~LP~sl~~L~~L~ 448 (788)
T PRK15387 381 --PSGLKELIVSGN-RLTSLPVL----PSELKELMVSGN-RLTSLPML----PSGLLSLSVYRNQLTRLPESLIHLSSET 448 (788)
T ss_pred --ccccceEEecCC-cccCCCCc----ccCCCEEEccCC-cCCCCCcc----hhhhhhhhhccCcccccChHHhhccCCC
Confidence 246788888775 34444331 257889999998 57777642 3468889999999999999888999999
Q ss_pred eEEccCCCCcc
Q psy8551 336 TIDIAENPIEC 346 (581)
Q Consensus 336 ~L~l~~~~~~~ 346 (581)
.+++++|++.+
T Consensus 449 ~LdLs~N~Ls~ 459 (788)
T PRK15387 449 TVNLEGNPLSE 459 (788)
T ss_pred eEECCCCCCCc
Confidence 99999999874
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.78 E-value=2.5e-18 Score=179.95 Aligned_cols=263 Identities=22% Similarity=0.241 Sum_probs=163.4
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCc
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ 124 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~ 124 (581)
..-..|+|+++.++.+|..+. ++|+.|++++|+++.+|. ..++|++|++++|.+
T Consensus 201 ~~~~~LdLs~~~LtsLP~~l~--~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~L-------------------- 254 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQL-------------------- 254 (788)
T ss_pred CCCcEEEcCCCCCCcCCcchh--cCCCEEEccCCcCCCCCC----CCCCCcEEEecCCcc--------------------
Confidence 456678888888888887654 478888888888887763 246788888887753
Q ss_pred ccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCc
Q psy8551 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204 (581)
Q Consensus 125 ~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~ 204 (581)
+.++. ..++|+.|++++|.++.++. ...+|+.|++++|.++.++. ..++|+.|++++|+++.++.
T Consensus 255 ---tsLP~----lp~sL~~L~Ls~N~L~~Lp~----lp~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~ 319 (788)
T PRK15387 255 ---TSLPV----LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA 319 (788)
T ss_pred ---CcccC----cccccceeeccCCchhhhhh----chhhcCEEECcCCccccccc----cccccceeECCCCccccCCC
Confidence 22221 13567788888887776654 13567778888887776653 23567778887777776543
Q ss_pred cccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccCCCCC
Q psy8551 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNL 284 (581)
Q Consensus 205 ~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 284 (581)
+ ..+|+.|.+.+|+++.+|. + ..+|++|++++|.++.++.. ..+|+
T Consensus 320 --l--p~~L~~L~Ls~N~L~~LP~--l--p~~Lq~LdLS~N~Ls~LP~l----p~~L~---------------------- 365 (788)
T PRK15387 320 --L--PSELCKLWAYNNQLTSLPT--L--PSGLQELSVSDNQLASLPTL----PSELY---------------------- 365 (788)
T ss_pred --C--cccccccccccCccccccc--c--ccccceEecCCCccCCCCCC----Ccccc----------------------
Confidence 1 2356777777777776663 1 24677777777776654431 12333
Q ss_pred CCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccccCCCCcceEEccCCCCccCCchhhHHHHHhhcCCCc
Q psy8551 285 NLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA 364 (581)
Q Consensus 285 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~ 364 (581)
.|++++| .+..++.. ..+|+.|++++|.++.+|.. .++|+.|++++|.+..
T Consensus 366 ---~L~Ls~N-~L~~LP~l----~~~L~~LdLs~N~Lt~LP~l---~s~L~~LdLS~N~Lss------------------ 416 (788)
T PRK15387 366 ---KLWAYNN-RLTSLPAL----PSGLKELIVSGNRLTSLPVL---PSELKELMVSGNRLTS------------------ 416 (788)
T ss_pred ---eehhhcc-ccccCccc----ccccceEEecCCcccCCCCc---ccCCCEEEccCCcCCC------------------
Confidence 4444444 33334321 23566777777777666543 2467777777765531
Q ss_pred eeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceee
Q psy8551 365 VFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444 (581)
Q Consensus 365 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~ 444 (581)
++. ...+|+.|++++|+++.+| ..+..+++|+.|++++|.+++.
T Consensus 417 -------------------------------IP~----l~~~L~~L~Ls~NqLt~LP-~sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 417 -------------------------------LPM----LPSGLLSLSVYRNQLTRLP-ESLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred -------------------------------CCc----chhhhhhhhhccCcccccC-hHHhhccCCCeEECCCCCCCch
Confidence 110 0234666777777777665 4566777777777777777755
Q ss_pred ccc
Q psy8551 445 EAG 447 (581)
Q Consensus 445 ~~~ 447 (581)
.+.
T Consensus 461 ~~~ 463 (788)
T PRK15387 461 TLQ 463 (788)
T ss_pred HHH
Confidence 443
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.71 E-value=4.1e-17 Score=172.10 Aligned_cols=239 Identities=23% Similarity=0.356 Sum_probs=134.6
Q ss_pred ccCCCccCCCCCCcCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCccccc
Q psy8551 32 QEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVC 111 (581)
Q Consensus 32 ~~~~l~~ip~~~~~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 111 (581)
.+..++.+|..++++++.|+|++|.++.+|..+. ++|++|++++|+++.+|.. + .++|+.|++++|.+
T Consensus 186 ~~~~LtsLP~~Ip~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~~-l--~~~L~~L~Ls~N~L------- 253 (754)
T PRK15370 186 KILGLTTIPACIPEQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPAT-L--PDTIQEMELSINRI------- 253 (754)
T ss_pred CCCCcCcCCcccccCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCChh-h--hccccEEECcCCcc-------
Confidence 6666667776666677777777777776665432 4677777777766666532 1 13566666666643
Q ss_pred ccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcE
Q psy8551 112 SIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 191 (581)
Q Consensus 112 ~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~ 191 (581)
..++.. + ..+|+.|++++|+++.+|.. + ..+|++|++++|.++.++.. + .++|+.
T Consensus 254 ----------------~~LP~~-l--~s~L~~L~Ls~N~L~~LP~~-l--~~sL~~L~Ls~N~Lt~LP~~-l--p~sL~~ 308 (754)
T PRK15370 254 ----------------TELPER-L--PSALQSLDLFHNKISCLPEN-L--PEELRYLSVYDNSIRTLPAH-L--PSGITH 308 (754)
T ss_pred ----------------CcCChh-H--hCCCCEEECcCCccCccccc-c--CCCCcEEECCCCccccCccc-c--hhhHHH
Confidence 222111 1 13566666666666655542 2 23566666666666554431 1 134555
Q ss_pred EEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCC
Q psy8551 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271 (581)
Q Consensus 192 L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 271 (581)
|++++|.++.++.. + .++|+.|++++|.++.+|. .+ .++|+.|++++|.+..++..
T Consensus 309 L~Ls~N~Lt~LP~~-l--~~sL~~L~Ls~N~Lt~LP~-~l--~~sL~~L~Ls~N~L~~LP~~------------------ 364 (754)
T PRK15370 309 LNVQSNSLTALPET-L--PPGLKTLEAGENALTSLPA-SL--PPELQVLDVSKNQITVLPET------------------ 364 (754)
T ss_pred HHhcCCccccCCcc-c--cccceeccccCCccccCCh-hh--cCcccEEECCCCCCCcCChh------------------
Confidence 66666655544321 1 2455666666665555542 12 14555566655554432211
Q ss_pred ceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccc----cCCCCcceEEccCCCCc
Q psy8551 272 LTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESM----LAWPELRTIDIAENPIE 345 (581)
Q Consensus 272 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~----~~~~~L~~L~l~~~~~~ 345 (581)
+ .++|+.|++++| .+..+|.. +. ..|+.|++++|++..+|..+ ...+.+..+++.+|++.
T Consensus 365 --------l--p~~L~~LdLs~N-~Lt~LP~~-l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 365 --------L--PPTITTLDVSRN-ALTNLPEN-LP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred --------h--cCCcCEEECCCC-cCCCCCHh-HH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 1 135667777776 45555543 21 35778888888887766543 23467788888888876
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.64 E-value=1.6e-15 Score=160.08 Aligned_cols=225 Identities=21% Similarity=0.342 Sum_probs=115.1
Q ss_pred CCcCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCccccccc
Q psy8551 43 SNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF 122 (581)
Q Consensus 43 ~~~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l 122 (581)
+..+.+.|+++++.++.+|..+. ++|+.|++++|+++.+|...+ ++|++|++++|.+
T Consensus 176 l~~~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~L------------------ 232 (754)
T PRK15370 176 LKNNKTELRLKILGLTTIPACIP--EQITTLILDNNELKSLPENLQ---GNIKTLYANSNQL------------------ 232 (754)
T ss_pred cccCceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCCcCChhhc---cCCCEEECCCCcc------------------
Confidence 33556677777777777765442 467777777777776664332 3667777776642
Q ss_pred CcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCcccc
Q psy8551 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202 (581)
Q Consensus 123 ~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~ 202 (581)
+.++.. + .++|+.|++++|.+..+|.. + ..+|+.|++++|.+..++.. +. ++|+.|++++|+++.+
T Consensus 233 -----tsLP~~-l--~~~L~~L~Ls~N~L~~LP~~-l--~s~L~~L~Ls~N~L~~LP~~-l~--~sL~~L~Ls~N~Lt~L 298 (754)
T PRK15370 233 -----TSIPAT-L--PDTIQEMELSINRITELPER-L--PSALQSLDLFHNKISCLPEN-LP--EELRYLSVYDNSIRTL 298 (754)
T ss_pred -----ccCChh-h--hccccEEECcCCccCcCChh-H--hCCCCEEECcCCccCccccc-cC--CCCcEEECCCCccccC
Confidence 222111 1 13566677777666665542 2 23566666666666554331 21 3555555555555543
Q ss_pred CccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccCCC
Q psy8551 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282 (581)
Q Consensus 203 ~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 282 (581)
+.. + ..+|+.|++++|+++.+|.. + .++|+.|++++|.++.++.. +
T Consensus 299 P~~-l--p~sL~~L~Ls~N~Lt~LP~~-l--~~sL~~L~Ls~N~Lt~LP~~--------------------------l-- 344 (754)
T PRK15370 299 PAH-L--PSGITHLNVQSNSLTALPET-L--PPGLKTLEAGENALTSLPAS--------------------------L-- 344 (754)
T ss_pred ccc-c--hhhHHHHHhcCCccccCCcc-c--cccceeccccCCccccCChh--------------------------h--
Confidence 321 1 12455555555555544421 1 13444445444443322110 0
Q ss_pred CCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccccCCCCcceEEccCCCC
Q psy8551 283 NLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 344 (581)
Q Consensus 283 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~ 344 (581)
.++|+.|++++| .+..++.. + .++|+.|++++|.++.+|+.+. ..|+.|++++|++
T Consensus 345 ~~sL~~L~Ls~N-~L~~LP~~-l--p~~L~~LdLs~N~Lt~LP~~l~--~sL~~LdLs~N~L 400 (754)
T PRK15370 345 PPELQVLDVSKN-QITVLPET-L--PPTITTLDVSRNALTNLPENLP--AALQIMQASRNNL 400 (754)
T ss_pred cCcccEEECCCC-CCCcCChh-h--cCCcCEEECCCCcCCCCCHhHH--HHHHHHhhccCCc
Confidence 134555566555 34444431 1 2456666666666666655432 2455555555544
No 19
>KOG0617|consensus
Probab=99.49 E-value=4.7e-16 Score=127.09 Aligned_cols=156 Identities=30% Similarity=0.437 Sum_probs=121.3
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCc
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ 124 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~ 124 (581)
.+++.|.|+.|+++.+|..+..+.+|+.|++++|+|+.+|. .+..+++|++|+++-|..
T Consensus 33 s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~-~issl~klr~lnvgmnrl-------------------- 91 (264)
T KOG0617|consen 33 SNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPT-SISSLPKLRILNVGMNRL-------------------- 91 (264)
T ss_pred hhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcCh-hhhhchhhhheecchhhh--------------------
Confidence 68999999999999999989999999999999999999985 688899999999987753
Q ss_pred ccccccchhhcCCCCCCcEEeCCCCcCcc--cCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCcccc
Q psy8551 125 NRISRIDQACFEGLTALRILYLDDNQLRS--VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202 (581)
Q Consensus 125 ~~l~~~~~~~l~~~~~L~~L~l~~~~i~~--~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~ 202 (581)
.+.+..|+.++.|+.||+..|++.. +|. .|-.+..|+.|+|+.|.+.-+++ .++++++|+.|.++.|.+-..
T Consensus 92 ----~~lprgfgs~p~levldltynnl~e~~lpg-nff~m~tlralyl~dndfe~lp~-dvg~lt~lqil~lrdndll~l 165 (264)
T KOG0617|consen 92 ----NILPRGFGSFPALEVLDLTYNNLNENSLPG-NFFYMTTLRALYLGDNDFEILPP-DVGKLTNLQILSLRDNDLLSL 165 (264)
T ss_pred ----hcCccccCCCchhhhhhccccccccccCCc-chhHHHHHHHHHhcCCCcccCCh-hhhhhcceeEEeeccCchhhC
Confidence 1235568888999999999888773 343 45567788888888888776665 477777888887777766554
Q ss_pred CccccCCCCCCcEEECCCCcCCccCc
Q psy8551 203 SDNAFRGLSGLRSLVLTDNRLQSIPT 228 (581)
Q Consensus 203 ~~~~l~~~~~L~~L~l~~n~l~~~~~ 228 (581)
+. .++.+..|++|.+.+|+++-+|+
T Consensus 166 pk-eig~lt~lrelhiqgnrl~vlpp 190 (264)
T KOG0617|consen 166 PK-EIGDLTRLRELHIQGNRLTVLPP 190 (264)
T ss_pred cH-HHHHHHHHHHHhcccceeeecCh
Confidence 43 46666777777777777776664
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.48 E-value=3.7e-15 Score=146.37 Aligned_cols=207 Identities=25% Similarity=0.276 Sum_probs=96.3
Q ss_pred cCCCCCCcEEeCCCCcCcccCCcccccCcc---CcEEECCCCcceec----cCCcCCCC-CCCcEEEcCCCCccccC---
Q psy8551 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGM---LAELRVGLNVFTTL----ADGAFNGL-GRLSALDLRGAGLTNIS--- 203 (581)
Q Consensus 135 l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~---L~~L~L~~n~~~~~----~~~~l~~l-~~L~~L~L~~~~l~~~~--- 203 (581)
+..+++|+.|++++|.+.......+..+.+ |++|++++|.+... ....+..+ ++|+.|++++|.++...
T Consensus 77 l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 156 (319)
T cd00116 77 LTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEA 156 (319)
T ss_pred HHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHH
Confidence 444555555555555554322223322222 55555555554421 11122333 55566666665554211
Q ss_pred -ccccCCCCCCcEEECCCCcCCccC----ccccCCCCCCCEEECCCCcccccCC----cccCCCcccceeeecCCCCcee
Q psy8551 204 -DNAFRGLSGLRSLVLTDNRLQSIP----TKQLSKLTRLEELEIGQNGFSMLEA----GCFKGLSYLKRLEITGASNLTR 274 (581)
Q Consensus 204 -~~~l~~~~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~~~~~~~~~----~~~~~~~~L~~L~l~~~~~~~~ 274 (581)
...+..+++|++|++++|.++... ...+..+++|++|++++|.+..... ..+..+++|+.|++++|. +..
T Consensus 157 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~-l~~ 235 (319)
T cd00116 157 LAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNN-LTD 235 (319)
T ss_pred HHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCc-Cch
Confidence 122334455666666666555211 1123334556666666665542211 123344455555555442 211
Q ss_pred ecCc-----cCCCCCCCCEEeCCCCCCccccc----cccccCCCCCcEEecCCCCCccc-----cccccCC-CCcceEEc
Q psy8551 275 VRKG-----AFADNLNLETLTLNKNPKLKTIE----EGALVGLPNLYHLNLKENAFTSF-----SESMLAW-PELRTIDI 339 (581)
Q Consensus 275 ~~~~-----~~~~~~~L~~L~l~~~~~~~~~~----~~~~~~~~~L~~L~l~~~~l~~~-----~~~~~~~-~~L~~L~l 339 (581)
.... .....+.|++|++++| .+++.. ...+..+++|+.+++++|.+... ...+... +.++++++
T Consensus 236 ~~~~~l~~~~~~~~~~L~~L~l~~n-~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~ 314 (319)
T cd00116 236 AGAAALASALLSPNISLLTLSLSCN-DITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWV 314 (319)
T ss_pred HHHHHHHHHHhccCCCceEEEccCC-CCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhccc
Confidence 1100 0112356777777776 333111 11344556777777777777632 1222233 56777777
Q ss_pred cCCC
Q psy8551 340 AENP 343 (581)
Q Consensus 340 ~~~~ 343 (581)
.+++
T Consensus 315 ~~~~ 318 (319)
T cd00116 315 KDDS 318 (319)
T ss_pred CCCC
Confidence 7664
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.43 E-value=1.7e-14 Score=141.60 Aligned_cols=39 Identities=26% Similarity=0.285 Sum_probs=18.4
Q ss_pred CCCCEEEcCCCcCCccC----hhhhcCCCCCcEeecCCCccee
Q psy8551 405 SGLRSLVLTDNRLQSIP----TKQLSKLTRLEELEIGQNGFSM 443 (581)
Q Consensus 405 ~~L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~l~~~~i~~ 443 (581)
+.|+.|++++|.++... ...+..+++|+++++++|.++.
T Consensus 250 ~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 250 ISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred CCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 44555555555554211 1233444555555555555553
No 22
>KOG0617|consensus
Probab=99.43 E-value=2.8e-15 Score=122.61 Aligned_cols=167 Identities=27% Similarity=0.379 Sum_probs=135.2
Q ss_pred ccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCC
Q psy8551 58 KTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEG 137 (581)
Q Consensus 58 ~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~ 137 (581)
.++|. +..+.+.+.|.||+|+++.+++. +..+.+|+.|++++|++ ++++. .++.
T Consensus 24 ~~~~g-Lf~~s~ITrLtLSHNKl~~vppn-ia~l~nlevln~~nnqi-----------------------e~lp~-~iss 77 (264)
T KOG0617|consen 24 EELPG-LFNMSNITRLTLSHNKLTVVPPN-IAELKNLEVLNLSNNQI-----------------------EELPT-SISS 77 (264)
T ss_pred hhccc-ccchhhhhhhhcccCceeecCCc-HHHhhhhhhhhcccchh-----------------------hhcCh-hhhh
Confidence 34443 34677888899999999999974 78899999999999863 44433 3778
Q ss_pred CCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcce-eccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEE
Q psy8551 138 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT-TLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSL 216 (581)
Q Consensus 138 ~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~-~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 216 (581)
+++|+.|+++-|++...|. .|+.++.|+.|+|.+|++. ...+..|..++.|+.|.++.|.+.-+++ .++++.+|+.|
T Consensus 78 l~klr~lnvgmnrl~~lpr-gfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~-dvg~lt~lqil 155 (264)
T KOG0617|consen 78 LPKLRILNVGMNRLNILPR-GFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPP-DVGKLTNLQIL 155 (264)
T ss_pred chhhhheecchhhhhcCcc-ccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCCh-hhhhhcceeEE
Confidence 9999999999888887776 8999999999999999887 3445567778889999999988876655 57889999999
Q ss_pred ECCCCcCCccCccccCCCCCCCEEECCCCcccccCCc
Q psy8551 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253 (581)
Q Consensus 217 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 253 (581)
.+++|.+-.+| ..++.+..|++|++.+|.++.+++.
T Consensus 156 ~lrdndll~lp-keig~lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 156 SLRDNDLLSLP-KEIGDLTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred eeccCchhhCc-HHHHHHHHHHHHhcccceeeecChh
Confidence 99999888888 4588888999999999988877654
No 23
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.17 E-value=1.3e-11 Score=106.13 Aligned_cols=116 Identities=23% Similarity=0.312 Sum_probs=30.1
Q ss_pred CCccCCCCC-CcCccEEEcccCCccccccccc-CCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccc
Q psy8551 35 NLDVIPSHS-NPSIQRLVLSTNRIKTVDSAIP-IYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCS 112 (581)
Q Consensus 35 ~l~~ip~~~-~~~l~~L~L~~~~i~~l~~~~~-~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 112 (581)
.++.+|... +-++++|+|.+++|+.+.. +. .+.+|+.|++++|.|+.+. .+..+++|++|++++|.+
T Consensus 8 ~i~~~~~~~n~~~~~~L~L~~n~I~~Ie~-L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I-------- 76 (175)
T PF14580_consen 8 MIEQIAQYNNPVKLRELNLRGNQISTIEN-LGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRI-------- 76 (175)
T ss_dssp ----------------------------S---TT-TT--EEE-TTS--S--T--T----TT--EEE--SS----------
T ss_pred ccccccccccccccccccccccccccccc-hhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCC--------
Confidence 344444433 2356777777777776643 33 4667777777777777665 356666677777776653
Q ss_pred cCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCC-cccccCccCcEEECCCCcce
Q psy8551 113 IISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT-PSFIYLGMLAELRVGLNVFT 176 (581)
Q Consensus 113 ~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~-~~~~~~~~L~~L~L~~n~~~ 176 (581)
+.+.......+++|++|++++|+|..+.. ..+..+++|++|++.+|+++
T Consensus 77 ---------------~~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 77 ---------------SSISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp ----------------S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ---------------CccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 33322111245666666666666655432 23445556666666666554
No 24
>KOG3207|consensus
Probab=99.15 E-value=8.6e-12 Score=117.49 Aligned_cols=212 Identities=20% Similarity=0.240 Sum_probs=152.4
Q ss_pred CCCCCCEEeCCCCCCcccccc-ccccCCCCCcEEecCCCCCccc---cccccCCCCcceEEccCCCCccCCchhhHHHHH
Q psy8551 282 DNLNLETLTLNKNPKLKTIEE-GALVGLPNLYHLNLKENAFTSF---SESMLAWPELRTIDIAENPIECGCNILWLREML 357 (581)
Q Consensus 282 ~~~~L~~L~l~~~~~~~~~~~-~~~~~~~~L~~L~l~~~~l~~~---~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~ 357 (581)
++.+|+.+.++++ .++..+. .....+++++.|+++.|-+..+ .....++|+|+.|+++.|.+.+..+
T Consensus 119 n~kkL~~IsLdn~-~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~-------- 189 (505)
T KOG3207|consen 119 NLKKLREISLDNY-RVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFIS-------- 189 (505)
T ss_pred hHHhhhheeecCc-cccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCcc--------
Confidence 4567788888777 4555442 3456789999999999977643 3455688999999999998753210
Q ss_pred hhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccC-hhhhcCCCCCcEeec
Q psy8551 358 VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEI 436 (581)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L~l 436 (581)
+... ..+++|+.|.++.|.++.-. ...+..+|+|+.|.+
T Consensus 190 -------------------------------------s~~~---~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L 229 (505)
T KOG3207|consen 190 -------------------------------------SNTT---LLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYL 229 (505)
T ss_pred -------------------------------------ccch---hhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhh
Confidence 0000 12578999999999887322 134567899999999
Q ss_pred CCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCc------cCCCCCccEEEc
Q psy8551 437 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDA------LVGLPNLYHLNL 510 (581)
Q Consensus 437 ~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~------~~~l~~L~~L~l 510 (581)
..|............+..|+.|+|++|+.++.-.......++.|+.|+++.| .+.++.... ...+++|++|++
T Consensus 230 ~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~t-gi~si~~~d~~s~~kt~~f~kL~~L~i 308 (505)
T KOG3207|consen 230 EANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSST-GIASIAEPDVESLDKTHTFPKLEYLNI 308 (505)
T ss_pred hcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhcccc-CcchhcCCCccchhhhcccccceeeec
Confidence 9886444434444567789999999977666555556778899999999999 666654322 356889999999
Q ss_pred CCCcceeec--cccccCCcceEEecCCCcccccCc
Q psy8551 511 KENAFTSFS--ESMLAWPELRTIDIAENPIECGCN 543 (581)
Q Consensus 511 ~~n~l~~l~--~~~~~~~~L~~L~l~~np~~c~c~ 543 (581)
..|++..++ ..+...++|+.|.+.+|+++-.-+
T Consensus 309 ~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e~~ 343 (505)
T KOG3207|consen 309 SENNIRDWRSLNHLRTLENLKHLRITLNYLNKETD 343 (505)
T ss_pred ccCccccccccchhhccchhhhhhccccccccccc
Confidence 999998765 446677889999999999875555
No 25
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.05 E-value=1.1e-10 Score=100.41 Aligned_cols=129 Identities=28% Similarity=0.369 Sum_probs=51.5
Q ss_pred cCCCCCCcEEeCCCCcCcccCCcccc-cCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCC
Q psy8551 135 FEGLTALRILYLDDNQLRSVPTPSFI-YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGL 213 (581)
Q Consensus 135 l~~~~~L~~L~l~~~~i~~~~~~~~~-~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L 213 (581)
+.+..+++.|++++|.|+.+.. ++ .+.+|+.|++++|.++.+.. +..+++|+.|++++|.++.+.......+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie~--L~~~l~~L~~L~Ls~N~I~~l~~--l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIEN--LGATLDKLEVLDLSNNQITKLEG--LPGLPRLKTLDLSNNRISSISEGLDKNLPNL 90 (175)
T ss_dssp ---------------------S----TT-TT--EEE-TTS--S--TT------TT--EEE--SS---S-CHHHHHH-TT-
T ss_pred cccccccccccccccccccccc--hhhhhcCCCEEECCCCCCccccC--ccChhhhhhcccCCCCCCccccchHHhCCcC
Confidence 4566788999999999988753 44 57899999999999998764 7889999999999999998765322458899
Q ss_pred cEEECCCCcCCccCc-cccCCCCCCCEEECCCCcccccCC---cccCCCcccceeeec
Q psy8551 214 RSLVLTDNRLQSIPT-KQLSKLTRLEELEIGQNGFSMLEA---GCFKGLSYLKRLEIT 267 (581)
Q Consensus 214 ~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~---~~~~~~~~L~~L~l~ 267 (581)
++|++++|++..+.. ..++.+++|+.|++.+|++..... ..+..+|+|+.|+-.
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 999999999986542 457788999999999998875432 234456666666543
No 26
>KOG1259|consensus
Probab=98.96 E-value=2.1e-10 Score=102.98 Aligned_cols=198 Identities=20% Similarity=0.227 Sum_probs=129.8
Q ss_pred cccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhc---CCCC
Q psy8551 63 AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACF---EGLT 139 (581)
Q Consensus 63 ~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l---~~~~ 139 (581)
.+.-+++|..+.+|.+.-..+-. ....-|.|+++.+.+..+ .....+..-..+.+.....=+....... ..-.
T Consensus 209 ~l~~f~~l~~~~~s~~~~~~i~~-~~~~kptl~t~~v~~s~~---~~~~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq 284 (490)
T KOG1259|consen 209 NLNAFRNLKTLKFSALSTENIVD-IELLKPTLQTICVHNTTI---QDVPSLLPETILADPSGSEPSTSNGSALVSADTWQ 284 (490)
T ss_pred chHHhhhhheeeeeccchhheec-eeecCchhheeeeecccc---cccccccchhhhcCccCCCCCccCCceEEecchHh
Confidence 34456777777777775433331 112235677777766543 1111111112222222221111111111 2235
Q ss_pred CCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECC
Q psy8551 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLT 219 (581)
Q Consensus 140 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~ 219 (581)
.|+.+|+++|.|+.+.. ...-.+.++.|+++.|.+..+.. +..+++|+.|++++|.++.+.. +-.++.++++|.++
T Consensus 285 ~LtelDLS~N~I~~iDE-SvKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls~~~G-wh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLITQIDE-SVKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLAECVG-WHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchhhhhh-hhhhccceeEEeccccceeeehh--hhhcccceEeecccchhHhhhh-hHhhhcCEeeeehh
Confidence 68889999998888765 56667889999999998887765 7788899999999998876543 23457788999999
Q ss_pred CCcCCccCccccCCCCCCCEEECCCCcccccCC-cccCCCcccceeeecCCC
Q psy8551 220 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGAS 270 (581)
Q Consensus 220 ~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~ 270 (581)
+|.+..+. .++++-+|..||+++|++..+.. ..++++|.|+.+.+.+|+
T Consensus 361 ~N~iE~LS--GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 361 QNKIETLS--GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred hhhHhhhh--hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCC
Confidence 99888775 37778889999999998887654 357888999998888764
No 27
>KOG1259|consensus
Probab=98.94 E-value=2.6e-10 Score=102.29 Aligned_cols=134 Identities=24% Similarity=0.354 Sum_probs=111.9
Q ss_pred CCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCee
Q psy8551 404 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETL 483 (581)
Q Consensus 404 ~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L 483 (581)
++.|+++++++|.++.+. +.+.-.|.++.|++++|.+..+.. +..+++|+.|++++| .+..+. ++-..+-++++|
T Consensus 283 Wq~LtelDLS~N~I~~iD-ESvKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N-~Ls~~~-Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQID-ESVKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGN-LLAECV-GWHLKLGNIKTL 357 (490)
T ss_pred Hhhhhhccccccchhhhh-hhhhhccceeEEeccccceeeehh--hhhcccceEeecccc-hhHhhh-hhHhhhcCEeee
Confidence 678999999999998876 678889999999999999998865 788999999999984 444431 223456799999
Q ss_pred eCCCCCCceeecCCccCCCCCccEEEcCCCcceeec--cccccCCcceEEecCCCcccccCchh
Q psy8551 484 TLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFS--ESMLAWPELRTIDIAENPIECGCNIL 545 (581)
Q Consensus 484 ~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~--~~~~~~~~L~~L~l~~np~~c~c~~~ 545 (581)
.+++| .+.++ .+++.+-+|.+||+++|+|..+. ..+.++|-|+.+.+.+||+.-.-+.+
T Consensus 358 ~La~N-~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdYR 418 (490)
T KOG1259|consen 358 KLAQN-KIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDYR 418 (490)
T ss_pred ehhhh-hHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchHH
Confidence 99999 78876 45788899999999999999776 46788999999999999997766543
No 28
>KOG3207|consensus
Probab=98.91 E-value=1.6e-10 Score=109.15 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=16.8
Q ss_pred CCCCcEEecCCCCCccccc--cccCCCCcceEEccCCCC
Q psy8551 308 LPNLYHLNLKENAFTSFSE--SMLAWPELRTIDIAENPI 344 (581)
Q Consensus 308 ~~~L~~L~l~~~~l~~~~~--~~~~~~~L~~L~l~~~~~ 344 (581)
.++|+.|++..|++..++. .+..+++|+.+.+..|++
T Consensus 300 f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~l 338 (505)
T KOG3207|consen 300 FPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYL 338 (505)
T ss_pred cccceeeecccCccccccccchhhccchhhhhhcccccc
Confidence 3455555555555543322 233344444444444443
No 29
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.91 E-value=1.4e-09 Score=109.90 Aligned_cols=188 Identities=27% Similarity=0.403 Sum_probs=83.7
Q ss_pred EEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCC-cccEEeCCCCCCCCcccccccCCcccccccCccccc
Q psy8551 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQE-KLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRIS 128 (581)
Q Consensus 50 L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~ 128 (581)
+++..+.+......+..+++++.+++.++.++.++. .....+ +|+.|++++|.+ .
T Consensus 98 l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~-~~~~~~~nL~~L~l~~N~i-----------------------~ 153 (394)
T COG4886 98 LDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPP-LIGLLKSNLKELDLSDNKI-----------------------E 153 (394)
T ss_pred eeccccccccCchhhhcccceeEEecCCcccccCcc-ccccchhhcccccccccch-----------------------h
Confidence 445555443222333344556666666666666553 223332 566666666543 1
Q ss_pred ccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccC
Q psy8551 129 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208 (581)
Q Consensus 129 ~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~ 208 (581)
.++ ..++.+++|+.|++++|+++.++. ..+..+.|+.|++++|.+..++.. ......|+.+.+++|++.... ..+.
T Consensus 154 ~l~-~~~~~l~~L~~L~l~~N~l~~l~~-~~~~~~~L~~L~ls~N~i~~l~~~-~~~~~~L~~l~~~~N~~~~~~-~~~~ 229 (394)
T COG4886 154 SLP-SPLRNLPNLKNLDLSFNDLSDLPK-LLSNLSNLNNLDLSGNKISDLPPE-IELLSALEELDLSNNSIIELL-SSLS 229 (394)
T ss_pred hhh-hhhhccccccccccCCchhhhhhh-hhhhhhhhhheeccCCccccCchh-hhhhhhhhhhhhcCCcceecc-hhhh
Confidence 110 123444555555555555544443 111344455555555554444431 122233444444444322111 1233
Q ss_pred CCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecC
Q psy8551 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268 (581)
Q Consensus 209 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 268 (581)
.+.++..+.+.+|++..++ ..++.++.++.|++++|.++.+.. ++...+++.+++++
T Consensus 230 ~~~~l~~l~l~~n~~~~~~-~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~ 286 (394)
T COG4886 230 NLKNLSGLELSNNKLEDLP-ESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSG 286 (394)
T ss_pred hcccccccccCCceeeecc-chhccccccceecccccccccccc--ccccCccCEEeccC
Confidence 4444444444444444432 234444445555555555444443 44444455555544
No 30
>KOG1909|consensus
Probab=98.90 E-value=7.6e-11 Score=108.19 Aligned_cols=248 Identities=23% Similarity=0.262 Sum_probs=123.5
Q ss_pred cCccEEEcccCCccc-----ccccccCCCcccEEEcCCCce----eecC------CCCCCCCCcccEEeCCCCCCCCccc
Q psy8551 45 PSIQRLVLSTNRIKT-----VDSAIPIYLSLQHVDLSHTTW----LIIP------IGGFEPQEKLVELQLNHNKHFPQQI 109 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~-----l~~~~~~~~~L~~L~ls~~~l----~~~~------~~~~~~l~~L~~L~l~~n~~~~~~~ 109 (581)
..+++++|++|.+.. +...+.+.++|+..++|+--. ..++ ..++..+++|++||||.|-+.+..+
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 467777777777752 333555666777777765311 1222 1234445566666666655422211
Q ss_pred ccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCC
Q psy8551 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 189 (581)
Q Consensus 110 ~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L 189 (581)
... ..-++++..|++|.+.+|.+.......++. .|..|. . .....+-++|
T Consensus 110 ------------------~~l-~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~-------~kk~~~~~~L 159 (382)
T KOG1909|consen 110 ------------------RGL-EELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--V-------NKKAASKPKL 159 (382)
T ss_pred ------------------HHH-HHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--H-------HhccCCCcce
Confidence 000 112344555666666655554332222111 011111 0 0113344567
Q ss_pred cEEEcCCCCccccCcc----ccCCCCCCcEEECCCCcCCc----cCccccCCCCCCCEEECCCCcccccCCcccCCCccc
Q psy8551 190 SALDLRGAGLTNISDN----AFRGLSGLRSLVLTDNRLQS----IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261 (581)
Q Consensus 190 ~~L~L~~~~l~~~~~~----~l~~~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 261 (581)
+++...+|++.+.+.. .|...+.|+.+.+..|.|.. .....+..+++|+.||+.+|.++......+
T Consensus 160 rv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~L------ 233 (382)
T KOG1909|consen 160 RVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVAL------ 233 (382)
T ss_pred EEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHH------
Confidence 7777777766654432 34455677777777776542 223456677777777777776653221111
Q ss_pred ceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccc-----cccCCCCCcEEecCCCCCc-----cccccccCC
Q psy8551 262 KRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEG-----ALVGLPNLYHLNLKENAFT-----SFSESMLAW 331 (581)
Q Consensus 262 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~-----~~~~~~~L~~L~l~~~~l~-----~~~~~~~~~ 331 (581)
...++..++|+.+++.+| .+.+-... .-...|+|+.+.+.+|.++ .+.......
T Consensus 234 ---------------akaL~s~~~L~El~l~dc-ll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek 297 (382)
T KOG1909|consen 234 ---------------AKALSSWPHLRELNLGDC-LLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEK 297 (382)
T ss_pred ---------------HHHhcccchheeeccccc-ccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcc
Confidence 011222234444444444 33322211 1123567777777777766 122234446
Q ss_pred CCcceEEccCCCC
Q psy8551 332 PELRTIDIAENPI 344 (581)
Q Consensus 332 ~~L~~L~l~~~~~ 344 (581)
+.|..|++++|.+
T Consensus 298 ~dL~kLnLngN~l 310 (382)
T KOG1909|consen 298 PDLEKLNLNGNRL 310 (382)
T ss_pred hhhHHhcCCcccc
Confidence 7777777777776
No 31
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.89 E-value=2.3e-09 Score=75.77 Aligned_cols=59 Identities=27% Similarity=0.436 Sum_probs=56.1
Q ss_pred cCccEEEcccCCcccccc-cccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCC
Q psy8551 45 PSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~-~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~ 103 (581)
|++++|++++|+++.+|. .|.++++|++|++++|.++.+++.+|.++++|++|++++|.
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 589999999999999985 88999999999999999999999999999999999999986
No 32
>KOG1909|consensus
Probab=98.88 E-value=2.3e-10 Score=105.05 Aligned_cols=215 Identities=23% Similarity=0.196 Sum_probs=136.2
Q ss_pred cCccEEEcccCCc----cccc-------ccccCCCcccEEEcCCCceeecCC----CCCCCCCcccEEeCCCCCCCCccc
Q psy8551 45 PSIQRLVLSTNRI----KTVD-------SAIPIYLSLQHVDLSHTTWLIIPI----GGFEPQEKLVELQLNHNKHFPQQI 109 (581)
Q Consensus 45 ~~l~~L~L~~~~i----~~l~-------~~~~~~~~L~~L~ls~~~l~~~~~----~~~~~l~~L~~L~l~~n~~~~~~~ 109 (581)
+.+++.+++.--- ..+| .++..+++|++||||+|-+..-.. ..+..+..|++|.|.||.+.+...
T Consensus 58 ~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag 137 (382)
T KOG1909|consen 58 KELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAG 137 (382)
T ss_pred ccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHH
Confidence 4788888885422 2333 366678899999999997663221 235567899999999998744332
Q ss_pred ccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCc----ccccCccCcEEECCCCccee----ccCC
Q psy8551 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP----SFIYLGMLAELRVGLNVFTT----LADG 181 (581)
Q Consensus 110 ~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~----~~~~~~~L~~L~L~~n~~~~----~~~~ 181 (581)
-+-- ..|+.+.. ....++-+.|+.+..++|++...+.. .|...+.|+.+.+..|.+.. ....
T Consensus 138 ~~l~---~al~~l~~-------~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~e 207 (382)
T KOG1909|consen 138 GRLG---RALFELAV-------NKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAE 207 (382)
T ss_pred HHHH---HHHHHHHH-------HhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHH
Confidence 1100 11111111 11234557899999999988765432 35566788888888887652 2224
Q ss_pred cCCCCCCCcEEEcCCCCccccCc----cccCCCCCCcEEECCCCcCCccCcc----c-cCCCCCCCEEECCCCcccccCC
Q psy8551 182 AFNGLGRLSALDLRGAGLTNISD----NAFRGLSGLRSLVLTDNRLQSIPTK----Q-LSKLTRLEELEIGQNGFSMLEA 252 (581)
Q Consensus 182 ~l~~l~~L~~L~L~~~~l~~~~~----~~l~~~~~L~~L~l~~n~l~~~~~~----~-~~~l~~L~~L~l~~~~~~~~~~ 252 (581)
.+..+++|+.|+|+.|.++.... ..+..+++|+.|++++|.++.-... . -...|+|+.+.+.+|.++....
T Consensus 208 al~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~ 287 (382)
T KOG1909|consen 208 ALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAA 287 (382)
T ss_pred HHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHH
Confidence 56788889999998887764433 3455677888888888877743221 1 2336788888888888764322
Q ss_pred ----cccCCCcccceeeecCC
Q psy8551 253 ----GCFKGLSYLKRLEITGA 269 (581)
Q Consensus 253 ----~~~~~~~~L~~L~l~~~ 269 (581)
......+.|..|.+.+|
T Consensus 288 ~~la~~~~ek~dL~kLnLngN 308 (382)
T KOG1909|consen 288 LALAACMAEKPDLEKLNLNGN 308 (382)
T ss_pred HHHHHHHhcchhhHHhcCCcc
Confidence 12233455555555554
No 33
>KOG0532|consensus
Probab=98.87 E-value=7.6e-11 Score=114.77 Aligned_cols=189 Identities=23% Similarity=0.308 Sum_probs=126.8
Q ss_pred ccCCCccCCCCCC----cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCc
Q psy8551 32 QEANLDVIPSHSN----PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQ 107 (581)
Q Consensus 32 ~~~~l~~ip~~~~----~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 107 (581)
.++.+...|.... ......||+.|++..+|..+..|-.|+.+.|..|.+..++. .+.++..|++||++.|++
T Consensus 58 s~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~-~i~~L~~lt~l~ls~Nql--- 133 (722)
T KOG0532|consen 58 SGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPE-AICNLEALTFLDLSSNQL--- 133 (722)
T ss_pred ccchhhcCCCccccccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecch-hhhhhhHHHHhhhccchh---
Confidence 5566666555332 35667888999999999888888889999999888888884 688888899999998875
Q ss_pred ccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCC
Q psy8551 108 QIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187 (581)
Q Consensus 108 ~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~ 187 (581)
+.++.. +.. --|+.|-+++|+++.+|. .++...+|..|+.+.|.+..++.. ++.+.
T Consensus 134 --------------------S~lp~~-lC~-lpLkvli~sNNkl~~lp~-~ig~~~tl~~ld~s~nei~slpsq-l~~l~ 189 (722)
T KOG0532|consen 134 --------------------SHLPDG-LCD-LPLKVLIVSNNKLTSLPE-EIGLLPTLAHLDVSKNEIQSLPSQ-LGYLT 189 (722)
T ss_pred --------------------hcCChh-hhc-CcceeEEEecCccccCCc-ccccchhHHHhhhhhhhhhhchHH-hhhHH
Confidence 212111 111 225666666677666665 344566666677777766666553 56666
Q ss_pred CCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccC
Q psy8551 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251 (581)
Q Consensus 188 ~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 251 (581)
+|+.|+++.|++..++.. +. .-.|..||++.|+++.+| -.|.++..|++|.|.+|.+...+
T Consensus 190 slr~l~vrRn~l~~lp~E-l~-~LpLi~lDfScNkis~iP-v~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 190 SLRDLNVRRNHLEDLPEE-LC-SLPLIRLDFSCNKISYLP-VDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred HHHHHHHhhhhhhhCCHH-Hh-CCceeeeecccCceeecc-hhhhhhhhheeeeeccCCCCCCh
Confidence 777777777766666553 22 335667777777777776 35667777777777777665443
No 34
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.86 E-value=4.1e-09 Score=106.54 Aligned_cols=179 Identities=27% Similarity=0.404 Sum_probs=119.9
Q ss_pred cCccEEEcccCCcccccccccCCC-cccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccC
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFG 123 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~-~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~ 123 (581)
+.++.|++.++.+.+++....... +|+.|++++|++..++ ..+..+++|+.|++++|.+
T Consensus 116 ~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~-~~~~~l~~L~~L~l~~N~l------------------- 175 (394)
T COG4886 116 TNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLP-SPLRNLPNLKNLDLSFNDL------------------- 175 (394)
T ss_pred cceeEEecCCcccccCccccccchhhcccccccccchhhhh-hhhhccccccccccCCchh-------------------
Confidence 467778888888887777666664 7888888888777775 3467777788888877753
Q ss_pred cccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccC
Q psy8551 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203 (581)
Q Consensus 124 ~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~ 203 (581)
.+++.. .+..+.|+.|++++|++..++. ......+|+++.+++|.+...+. .+.++..+..+.+.++++...
T Consensus 176 ----~~l~~~-~~~~~~L~~L~ls~N~i~~l~~-~~~~~~~L~~l~~~~N~~~~~~~-~~~~~~~l~~l~l~~n~~~~~- 247 (394)
T COG4886 176 ----SDLPKL-LSNLSNLNNLDLSGNKISDLPP-EIELLSALEELDLSNNSIIELLS-SLSNLKNLSGLELSNNKLEDL- 247 (394)
T ss_pred ----hhhhhh-hhhhhhhhheeccCCccccCch-hhhhhhhhhhhhhcCCcceecch-hhhhcccccccccCCceeeec-
Confidence 222221 2256777788888888777776 23445667777777775333322 356667777777777766543
Q ss_pred ccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCc
Q psy8551 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253 (581)
Q Consensus 204 ~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 253 (581)
+..+..+++++.|++++|+++.++. +....++++++++++.+....+.
T Consensus 248 ~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 248 PESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cchhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 2345666778888888887777764 66777788888877776655443
No 35
>KOG4658|consensus
Probab=98.77 E-value=7.6e-09 Score=111.83 Aligned_cols=140 Identities=24% Similarity=0.276 Sum_probs=106.8
Q ss_pred CCCccCCCCCC-cCccEEEcccCCcccccccccCCCcccEEEcCCCc--eeecCCCCCCCCCcccEEeCCCCCCCCcccc
Q psy8551 34 ANLDVIPSHSN-PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTT--WLIIPIGGFEPQEKLVELQLNHNKHFPQQIV 110 (581)
Q Consensus 34 ~~l~~ip~~~~-~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~--l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 110 (581)
.++..+|.... ..++++.+-++.+..++... .+++|++|-+..|. +..++...|..++.|++||+++|..
T Consensus 511 ~~~~~~~~~~~~~~~rr~s~~~~~~~~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~------ 583 (889)
T KOG4658|consen 511 VGLSEIPQVKSWNSVRRMSLMNNKIEHIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSS------ 583 (889)
T ss_pred cCccccccccchhheeEEEEeccchhhccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCc------
Confidence 45555665543 68899999999998877654 55589999999886 7788877899999999999998752
Q ss_pred cccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCc
Q psy8551 111 CSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 190 (581)
Q Consensus 111 ~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~ 190 (581)
+..+ |..++++-+|++|++++..+..+|. .+.++..|.+|++..+......+.....+++|+
T Consensus 584 ----------------l~~L-P~~I~~Li~LryL~L~~t~I~~LP~-~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr 645 (889)
T KOG4658|consen 584 ----------------LSKL-PSSIGELVHLRYLDLSDTGISHLPS-GLGNLKKLIYLNLEVTGRLESIPGILLELQSLR 645 (889)
T ss_pred ----------------cCcC-ChHHhhhhhhhcccccCCCccccch-HHHHHHhhheeccccccccccccchhhhccccc
Confidence 2222 4457788899999999999998887 788889999999987764444454555688888
Q ss_pred EEEcCCCC
Q psy8551 191 ALDLRGAG 198 (581)
Q Consensus 191 ~L~L~~~~ 198 (581)
+|.+....
T Consensus 646 ~L~l~~s~ 653 (889)
T KOG4658|consen 646 VLRLPRSA 653 (889)
T ss_pred EEEeeccc
Confidence 88877654
No 36
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.73 E-value=1.2e-08 Score=72.01 Aligned_cols=60 Identities=33% Similarity=0.450 Sum_probs=38.4
Q ss_pred CCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCC
Q psy8551 139 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198 (581)
Q Consensus 139 ~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~ 198 (581)
++|+.|++++|+++.++...|..+++|++|++++|.++.+++..|.++++|+.|++++|+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 355666666666666666666666666666666666666666666666666666666654
No 37
>KOG1859|consensus
Probab=98.65 E-value=8.1e-10 Score=110.69 Aligned_cols=128 Identities=27% Similarity=0.419 Sum_probs=99.4
Q ss_pred CCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeee
Q psy8551 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLT 484 (581)
Q Consensus 405 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~ 484 (581)
-.|...+.+.|.+..+. ..+.-++.|+.|+|++|++..+. .+..|+.|++|+|+. |.+..++.-....|+ |+.|.
T Consensus 164 n~L~~a~fsyN~L~~mD-~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsy-N~L~~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLVLMD-ESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSY-NCLRHVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHHhHH-HHHHHHHHhhhhccchhhhhhhH--HHHhccccccccccc-chhccccccchhhhh-heeee
Confidence 34666677777776554 56777888888888888888776 577888888888887 566666555555565 99999
Q ss_pred CCCCCCceeecCCccCCCCCccEEEcCCCcceeecc--ccccCCcceEEecCCCcccc
Q psy8551 485 LNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFSE--SMLAWPELRTIDIAENPIEC 540 (581)
Q Consensus 485 l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~~--~~~~~~~L~~L~l~~np~~c 540 (581)
+++| .++.+ .++.++.+|+.||+++|-|.+..+ -+..+..|+.|++.|||+-|
T Consensus 239 lrnN-~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 239 LRNN-ALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred eccc-HHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 9999 77776 458899999999999998886542 35567889999999999966
No 38
>KOG4658|consensus
Probab=98.62 E-value=2.2e-08 Score=108.32 Aligned_cols=202 Identities=20% Similarity=0.257 Sum_probs=120.5
Q ss_pred CCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCc--ceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcE
Q psy8551 138 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV--FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRS 215 (581)
Q Consensus 138 ~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~--~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~ 215 (581)
....+.+.+.+|.+..++.. ..+++|++|-+..|. +..+....|..++.|+.||+++|.--...|..++.+-+|++
T Consensus 522 ~~~~rr~s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 35566677777766655542 234578888777775 45555555777888888888877544445667788888888
Q ss_pred EECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCC-CceeecCccCCCCCCCCEEeCCCC
Q psy8551 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS-NLTRVRKGAFADNLNLETLTLNKN 294 (581)
Q Consensus 216 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~ 294 (581)
|+++++.++.+| ..++++..|.+|++..+......+.....+++|+.|.+.... .........+..+.+|+.+.....
T Consensus 600 L~L~~t~I~~LP-~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 600 LDLSDTGISHLP-SGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred ccccCCCccccc-hHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecc
Confidence 888888888887 458888888888887765544445555667888888876532 111111222233344444444322
Q ss_pred CCccccccccccCCCCCc----EEecCCCCCccccccccCCCCcceEEccCCCCc
Q psy8551 295 PKLKTIEEGALVGLPNLY----HLNLKENAFTSFSESMLAWPELRTIDIAENPIE 345 (581)
Q Consensus 295 ~~~~~~~~~~~~~~~~L~----~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~ 345 (581)
. . .+. ..+..+..|. .+.+.++.....+..+..+.+|+.|.+.++.+.
T Consensus 679 s-~-~~~-e~l~~~~~L~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 679 S-V-LLL-EDLLGMTRLRSLLQSLSIEGCSKRTLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred h-h-HhH-hhhhhhHHHHHHhHhhhhcccccceeecccccccCcceEEEEcCCCc
Confidence 1 1 000 0122222222 333333444455556667778888888877653
No 39
>KOG0531|consensus
Probab=98.60 E-value=5.9e-09 Score=105.47 Aligned_cols=85 Identities=26% Similarity=0.395 Sum_probs=37.5
Q ss_pred CCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCc-cccCCCCCCcE
Q psy8551 137 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD-NAFRGLSGLRS 215 (581)
Q Consensus 137 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~-~~l~~~~~L~~ 215 (581)
.+++|++|++++|.|+.+.. +..+..|+.|++++|.+..+.. +..++.|+.+++++|.+..+.. . ...+.+++.
T Consensus 116 ~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~ 190 (414)
T KOG0531|consen 116 SLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISDISG--LESLKSLKLLDLSYNRIVDIENDE-LSELISLEE 190 (414)
T ss_pred hhhcchheeccccccccccc--hhhccchhhheeccCcchhccC--CccchhhhcccCCcchhhhhhhhh-hhhccchHH
Confidence 34444444555444444432 3334444455555554444432 3334444555555544444332 1 233444444
Q ss_pred EECCCCcCCcc
Q psy8551 216 LVLTDNRLQSI 226 (581)
Q Consensus 216 L~l~~n~l~~~ 226 (581)
+.+.+|.+..+
T Consensus 191 l~l~~n~i~~i 201 (414)
T KOG0531|consen 191 LDLGGNSIREI 201 (414)
T ss_pred HhccCCchhcc
Confidence 45555444433
No 40
>KOG0531|consensus
Probab=98.60 E-value=7.9e-09 Score=104.55 Aligned_cols=190 Identities=25% Similarity=0.309 Sum_probs=107.5
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCc
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ 124 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~ 124 (581)
..++.+.+..+.|..+...+..+++|+.|++.+|+|+.+.. .+..+++|++|++++|.+
T Consensus 72 ~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I-------------------- 130 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKI-------------------- 130 (414)
T ss_pred HhHHhhccchhhhhhhhcccccccceeeeeccccchhhccc-chhhhhcchheecccccc--------------------
Confidence 45666667777777755557778888888888888877763 266778888888888764
Q ss_pred ccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccC-CcCCCCCCCcEEEcCCCCccccC
Q psy8551 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD-GAFNGLGRLSALDLRGAGLTNIS 203 (581)
Q Consensus 125 ~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L~L~~~~l~~~~ 203 (581)
+.+.. +..++.|+.|++++|.++.+.. +..+..|+.+++++|.+..+.. . ...+.+++.+.+.+|.+..+.
T Consensus 131 ---~~i~~--l~~l~~L~~L~l~~N~i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~ 202 (414)
T KOG0531|consen 131 ---TKLEG--LSTLTLLKELNLSGNLISDISG--LESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE 202 (414)
T ss_pred ---ccccc--hhhccchhhheeccCcchhccC--CccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc
Confidence 22211 3344446666666666666553 3446666666666666665544 1 345556666666666555443
Q ss_pred ccccCCCCCCcEEECCCCcCCccCccccCCCCC--CCEEECCCCcccccCCcccCCCcccceeeecC
Q psy8551 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR--LEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268 (581)
Q Consensus 204 ~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 268 (581)
. +..+..+..+++..|.++.+.. +..+.. |+.+.+++|++.... ..+..+..+..+++..
T Consensus 203 ~--~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~ 264 (414)
T KOG0531|consen 203 G--LDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSS 264 (414)
T ss_pred c--hHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCcccccc-ccccccccccccchhh
Confidence 2 2222333344555555554432 222222 556666666555442 1233344444444443
No 41
>KOG0532|consensus
Probab=98.50 E-value=5e-09 Score=102.39 Aligned_cols=185 Identities=23% Similarity=0.258 Sum_probs=132.7
Q ss_pred CccccccCCCccCCCCCC--cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCC
Q psy8551 27 PSCNLQEANLDVIPSHSN--PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH 104 (581)
Q Consensus 27 ~~c~~~~~~l~~ip~~~~--~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~ 104 (581)
+.-++++++...+|.... -.|+.+.|+.|.+..+|..+.++..|+.|||+.|++..+|.. +..+ -|+.|-+++|++
T Consensus 78 ~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp~~-lC~l-pLkvli~sNNkl 155 (722)
T KOG0532|consen 78 VFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLSHLPDG-LCDL-PLKVLIVSNNKL 155 (722)
T ss_pred hhhhccccccccCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhhcCChh-hhcC-cceeEEEecCcc
Confidence 334457888888888664 689999999999999999999999999999999999988854 3333 388999999886
Q ss_pred --CCcccccccCCccccc--ccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccC
Q psy8551 105 --FPQQIVCSIISPRRVE--IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 180 (581)
Q Consensus 105 --~~~~~~~~~~~~~~L~--~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~ 180 (581)
+|. .++...+|. +.+.|++..++.. ++++.+|+.|++..|++..++. .+. .-.|..||++.|++..++.
T Consensus 156 ~~lp~----~ig~~~tl~~ld~s~nei~slpsq-l~~l~slr~l~vrRn~l~~lp~-El~-~LpLi~lDfScNkis~iPv 228 (722)
T KOG0532|consen 156 TSLPE----EIGLLPTLAHLDVSKNEIQSLPSQ-LGYLTSLRDLNVRRNHLEDLPE-ELC-SLPLIRLDFSCNKISYLPV 228 (722)
T ss_pred ccCCc----ccccchhHHHhhhhhhhhhhchHH-hhhHHHHHHHHHhhhhhhhCCH-HHh-CCceeeeecccCceeecch
Confidence 333 233334444 5566777766544 7778888888888888888776 344 4457788888888887775
Q ss_pred CcCCCCCCCcEEEcCCCCccccCcccc--CCCCCCcEEECCCC
Q psy8551 181 GAFNGLGRLSALDLRGAGLTNISDNAF--RGLSGLRSLVLTDN 221 (581)
Q Consensus 181 ~~l~~l~~L~~L~L~~~~l~~~~~~~l--~~~~~L~~L~l~~n 221 (581)
.|.++++|++|.|.+|.+..-+.... +...-.++|+...+
T Consensus 229 -~fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 229 -DFRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred -hhhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecchhc
Confidence 47888888888888887775443211 11223456666555
No 42
>KOG2982|consensus
Probab=98.47 E-value=2.5e-08 Score=89.78 Aligned_cols=206 Identities=22% Similarity=0.319 Sum_probs=125.6
Q ss_pred CCcEEeCCCCcCcccCCc-cc-ccCccCcEEECCCCcceecc--CCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcE
Q psy8551 140 ALRILYLDDNQLRSVPTP-SF-IYLGMLAELRVGLNVFTTLA--DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRS 215 (581)
Q Consensus 140 ~L~~L~l~~~~i~~~~~~-~~-~~~~~L~~L~L~~n~~~~~~--~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~ 215 (581)
.++.+.+.++.|...... .| ..++.++.++|.+|.++... ...+.++|+|+.|+++.|.+.......-....+|+.
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 334455555555543321 22 34677778888888776322 224567788888888888776443321134567888
Q ss_pred EECCCCcCC-ccCccccCCCCCCCEEECCCCccccc--CCcccCCC-cccceeeecCCCCceeecCccC-CCCCCCCEEe
Q psy8551 216 LVLTDNRLQ-SIPTKQLSKLTRLEELEIGQNGFSML--EAGCFKGL-SYLKRLEITGASNLTRVRKGAF-ADNLNLETLT 290 (581)
Q Consensus 216 L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~~~~~~~--~~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~-~~~~~L~~L~ 290 (581)
|-+.++.+. ......+..+|.+++|+++.|..... ........ +.++++.+.+|....+.....+ .-++++..+.
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~ 205 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVF 205 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchhee
Confidence 888887665 22334566788888888888854422 11112111 3455665555543322221111 2346788888
Q ss_pred CCCCCCccccccccccCCCCCcEEecCCCCCcccc--ccccCCCCcceEEccCCCCc
Q psy8551 291 LNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFS--ESMLAWPELRTIDIAENPIE 345 (581)
Q Consensus 291 l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~--~~~~~~~~L~~L~l~~~~~~ 345 (581)
+..|+.-+.-....+...|.+.-|+++.+++.++. +.+..++.|..|.++++++.
T Consensus 206 v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 206 VCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred eecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 88885444444556777888888999999888554 36677888999999988875
No 43
>PLN03150 hypothetical protein; Provisional
Probab=98.46 E-value=2.2e-07 Score=98.53 Aligned_cols=106 Identities=21% Similarity=0.271 Sum_probs=59.4
Q ss_pred CCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCC
Q psy8551 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLN 486 (581)
Q Consensus 407 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~ 486 (581)
++.|+|++|.+.+..+..+..+++|+.|++++|.+.+..+..+..+++|+.|++++| .+....+..+.++++|+.|+++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N-~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYN-SFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCC-CCCCCCchHHhcCCCCCEEECc
Confidence 566777777776665666777777777777777776665555566666666666552 3444444445555555555555
Q ss_pred CCCCceeecCCccCC-CCCccEEEcCCCc
Q psy8551 487 KNPKLKIIEEDALVG-LPNLYHLNLKENA 514 (581)
Q Consensus 487 ~~~~l~~~~~~~~~~-l~~L~~L~l~~n~ 514 (581)
+|...+.+|. .+.. ..++..+++.+|.
T Consensus 499 ~N~l~g~iP~-~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 499 GNSLSGRVPA-ALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CCcccccCCh-HHhhccccCceEEecCCc
Confidence 5533334432 2222 2234445555544
No 44
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=98.43 E-value=1.5e-07 Score=108.74 Aligned_cols=72 Identities=24% Similarity=0.494 Sum_probs=62.5
Q ss_pred EcCCCcceeeccc-cccCCcceEEecCCCcccccCchhHHHHHHhhcC-----CCceeeCCCcccccccccccCcccc
Q psy8551 509 NLKENAFTSFSES-MLAWPELRTIDIAENPIECGCNILWLREMLVRRN-----TSAVFCNSPAPLKYKSLISLSAEDL 580 (581)
Q Consensus 509 ~l~~n~l~~l~~~-~~~~~~L~~L~l~~np~~c~c~~~~~~~~~~~~~-----~~~~~c~~~~~~~~~~~~~~~~~~~ 580 (581)
||++|+|+.+++. +..+++|++|+|++|||.|+|+++||.+|++... ...+.|..|..++|+++.+++..|+
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC~L~WL~~WL~~~~v~v~~~~~i~CasP~~LrG~~L~~l~~~d~ 78 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDCGLARLPRWAEEKGVKVRQPEAALCAGPGALAGQPLLGIPLLDS 78 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccccccccHHHHHHHHhcCccccCCcccCCCCChHHCCCCcccCCcccC
Confidence 5899999999865 4468899999999999999999999999998863 3345799999999999999988764
No 45
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.39 E-value=1.3e-06 Score=72.80 Aligned_cols=104 Identities=20% Similarity=0.390 Sum_probs=39.2
Q ss_pred ccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccC
Q psy8551 129 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208 (581)
Q Consensus 129 ~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~ 208 (581)
.+...+|.++++|+.+.+.++ +..+....|..+.+++.+.+.. .+..+....|..++.|+.+.+..+ +..+....|.
T Consensus 25 ~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~~~~~-~~~i~~~~f~ 101 (129)
T PF13306_consen 25 KIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNIDIPSN-ITEIGSSSFS 101 (129)
T ss_dssp EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEEEETTT--BEEHTTTTT
T ss_pred EeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccccccccCcc-ccEEchhhhc
Confidence 344444555555555555543 5555554555555555555543 334444444555555555555443 3334444444
Q ss_pred CCCCCcEEECCCCcCCccCccccCCCCCC
Q psy8551 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237 (581)
Q Consensus 209 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 237 (581)
.+ +|+.+.+.. .++.++...|.++++|
T Consensus 102 ~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 102 NC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp T--T--EEE-TT-B-SS----GGG-----
T ss_pred CC-CceEEEECC-CccEECCccccccccC
Confidence 44 555555443 3444444444444443
No 46
>KOG2120|consensus
Probab=98.37 E-value=3.7e-09 Score=95.00 Aligned_cols=180 Identities=21% Similarity=0.141 Sum_probs=98.3
Q ss_pred ccCcEEECCCCcceec-cCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCC-cCCccC-ccccCCCCCCCE
Q psy8551 163 GMLAELRVGLNVFTTL-ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN-RLQSIP-TKQLSKLTRLEE 239 (581)
Q Consensus 163 ~~L~~L~L~~n~~~~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n-~l~~~~-~~~~~~l~~L~~ 239 (581)
..|++++|+...++.- ....+..|.+|+.|.+.++++.+.....+++..+|+.|+++.+ .++... .-.+.+|+.|.+
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 3466666666655521 1123456666666666666666555555666666777776654 233211 123456667777
Q ss_pred EECCCCcccccCC-ccc-CCCcccceeeecCCCCceeec--CccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEe
Q psy8551 240 LEIGQNGFSMLEA-GCF-KGLSYLKRLEITGASNLTRVR--KGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLN 315 (581)
Q Consensus 240 L~l~~~~~~~~~~-~~~-~~~~~L~~L~l~~~~~~~~~~--~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~ 315 (581)
|++++|......- ..+ .--++|+.|+++|+...-... ..-...+++|.+||++++..+..-....|.+++.|+++.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 7777765432110 000 112456666666643211111 011235677888888877555543344566778888888
Q ss_pred cCCCCCc--cccccccCCCCcceEEccCC
Q psy8551 316 LKENAFT--SFSESMLAWPELRTIDIAEN 342 (581)
Q Consensus 316 l~~~~l~--~~~~~~~~~~~L~~L~l~~~ 342 (581)
++.|... +.--.+...|+|.+|++.++
T Consensus 345 lsRCY~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCYDIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhcCCChHHeeeeccCcceEEEEeccc
Confidence 8877533 11113446678888888765
No 47
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.35 E-value=1.1e-06 Score=73.26 Aligned_cols=126 Identities=22% Similarity=0.403 Sum_probs=57.9
Q ss_pred cchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCC
Q psy8551 130 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209 (581)
Q Consensus 130 ~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~ 209 (581)
++..+|.++++|+.+.+.. .+..+....|..+.+|+.+.+..+ +..+...+|.++++|+.+.+.+ .+..+....|..
T Consensus 3 i~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~ 79 (129)
T PF13306_consen 3 IGNNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSN 79 (129)
T ss_dssp E-TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT
T ss_pred ECHHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccc
Confidence 3455577777777777764 466666666766767777776654 5555555666666677766654 444444555666
Q ss_pred CCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCccc
Q psy8551 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261 (581)
Q Consensus 210 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 261 (581)
+++|+.+.+..+ +..+....+.++ +|+.+.+.. .+..+....|.++++|
T Consensus 80 ~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 80 CTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp -TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 666666666553 555555555555 666666554 3444444445444443
No 48
>PLN03150 hypothetical protein; Provisional
Probab=98.31 E-value=1.3e-06 Score=92.73 Aligned_cols=108 Identities=17% Similarity=0.227 Sum_probs=87.4
Q ss_pred cCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECC
Q psy8551 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243 (581)
Q Consensus 164 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 243 (581)
.++.|+|++|.+.+..+..+..+++|+.|+|++|.+.+..+..+..+++|+.|++++|++++..+..+..+++|++|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47788999999887777778899999999999999887777778889999999999999987666788899999999999
Q ss_pred CCcccccCCcccCCC-cccceeeecCCCC
Q psy8551 244 QNGFSMLEAGCFKGL-SYLKRLEITGASN 271 (581)
Q Consensus 244 ~~~~~~~~~~~~~~~-~~L~~L~l~~~~~ 271 (581)
+|.+.+..+..+... ..+..+++.+|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCcc
Confidence 998887666555442 3456677776643
No 49
>KOG2120|consensus
Probab=98.28 E-value=7.6e-09 Score=93.04 Aligned_cols=202 Identities=18% Similarity=0.141 Sum_probs=113.2
Q ss_pred cCccEEEcccCCccc--ccccccCC-CcccEEEcCCCceee-cCCCCCCCCCcccEEeCCCCCCCCcccccccCCccccc
Q psy8551 45 PSIQRLVLSTNRIKT--VDSAIPIY-LSLQHVDLSHTTWLI-IPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVE 120 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~--l~~~~~~~-~~L~~L~ls~~~l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~ 120 (581)
..+..+.+...-+.+ +-+.+.-+ ..|+++|||+..|+. -....+.+|.+|+.|.+.++.
T Consensus 159 rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~----------------- 221 (419)
T KOG2120|consen 159 RGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLR----------------- 221 (419)
T ss_pred CCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccc-----------------
Confidence 455666666443332 11222222 257788888777662 112346677778888777765
Q ss_pred ccCcccccccchhhcCCCCCCcEEeCCCC-cCcccCCc-ccccCccCcEEECCCCcceeccCC-cCCC-CCCCcEEEcCC
Q psy8551 121 IFGQNRISRIDQACFEGLTALRILYLDDN-QLRSVPTP-SFIYLGMLAELRVGLNVFTTLADG-AFNG-LGRLSALDLRG 196 (581)
Q Consensus 121 ~l~~~~l~~~~~~~l~~~~~L~~L~l~~~-~i~~~~~~-~~~~~~~L~~L~L~~n~~~~~~~~-~l~~-l~~L~~L~L~~ 196 (581)
+.+-....+++-.+|+.|+++.+ +++.-... .+.+|+.|+.|+|+.+.+..-... .+.+ -++|+.|+++|
T Consensus 222 ------LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG 295 (419)
T KOG2120|consen 222 ------LDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSG 295 (419)
T ss_pred ------cCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhh
Confidence 22233444556667777777654 33322211 245677777777777654321111 1111 24677777777
Q ss_pred CC--ccccC-ccccCCCCCCcEEECCCC-cCCccCccccCCCCCCCEEECCCCccccc-CCcccCCCcccceeeecCC
Q psy8551 197 AG--LTNIS-DNAFRGLSGLRSLVLTDN-RLQSIPTKQLSKLTRLEELEIGQNGFSML-EAGCFKGLSYLKRLEITGA 269 (581)
Q Consensus 197 ~~--l~~~~-~~~l~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~~ 269 (581)
+. +..-. ..-...+++|.+|||+++ .++.-....|.+++.|++|.++.|..-.. ....+...|.|.+|++.|+
T Consensus 296 ~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 296 YRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYDIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcCCChHHeeeeccCcceEEEEeccc
Confidence 52 11111 112245888889999886 34443335567788899999988753211 1123567788888888775
No 50
>KOG4341|consensus
Probab=98.27 E-value=1.8e-08 Score=94.98 Aligned_cols=147 Identities=16% Similarity=0.105 Sum_probs=91.4
Q ss_pred CCCCCEEEcCCCc-CCccChhhh-cCCCCCcEeecCCCc-ceeeccccc-cCCccccEEeecCCCCeeEe-cCCccCCCC
Q psy8551 404 LSGLRSLVLTDNR-LQSIPTKQL-SKLTRLEELEIGQNG-FSMLEAGCF-KGLSYLKRLEITGASNLTRV-RKGAFADNL 478 (581)
Q Consensus 404 ~~~L~~L~l~~n~-l~~~~~~~l-~~l~~L~~L~l~~~~-i~~~~~~~~-~~~~~L~~L~l~~~~~l~~~-~~~~~~~~~ 478 (581)
+..|+.|..+++. ++......+ .++++|+.|.++.++ ++......+ .+++.|+.+++.+|..+.+. ....-.+|+
T Consensus 293 c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~ 372 (483)
T KOG4341|consen 293 CHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCP 372 (483)
T ss_pred hhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCc
Confidence 6667777777663 333322222 457788888887774 554443333 45677888888777655544 223335678
Q ss_pred CCCeeeCCCCCCceeecC----CccCCCCCccEEEcCCCcce--eeccccccCCcceEEecCCCcccccCchhHHHHH
Q psy8551 479 NLETLTLNKNPKLKIIEE----DALVGLPNLYHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREM 550 (581)
Q Consensus 479 ~L~~L~l~~~~~l~~~~~----~~~~~l~~L~~L~l~~n~l~--~l~~~~~~~~~L~~L~l~~np~~c~c~~~~~~~~ 550 (581)
.|+.+.++.|..+++... ..-..+..|+.+.+++|+.+ ...+.+..++.|+.+++.+++-...-..+.|..-
T Consensus 373 ~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~vtk~~i~~~~~~ 450 (483)
T KOG4341|consen 373 RLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQDVTKEAISRFATH 450 (483)
T ss_pred hhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhhhhhhhhHHHHhh
Confidence 888888887755544311 12234567888888888754 3445667788888888888777665555544443
No 51
>KOG4341|consensus
Probab=98.19 E-value=6.9e-08 Score=91.17 Aligned_cols=300 Identities=17% Similarity=0.104 Sum_probs=163.7
Q ss_pred CCCcEEEcCCCCccccCc--cccCCCCCCcEEECCCCc-CCccCccc-cCCCCCCCEEECCCC-cccccCCc-ccCCCcc
Q psy8551 187 GRLSALDLRGAGLTNISD--NAFRGLSGLRSLVLTDNR-LQSIPTKQ-LSKLTRLEELEIGQN-GFSMLEAG-CFKGLSY 260 (581)
Q Consensus 187 ~~L~~L~L~~~~l~~~~~--~~l~~~~~L~~L~l~~n~-l~~~~~~~-~~~l~~L~~L~l~~~-~~~~~~~~-~~~~~~~ 260 (581)
..|+.|.++++.-....+ .....++++++|.+.++. +++..... -..+++|+++++..| .++..... ....+++
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~k 217 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRK 217 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhh
Confidence 356777777663222211 123457777777776663 22221111 234677777777663 33332222 2345667
Q ss_pred cceeeecCCCCceeecCc-cCCCCCCCCEEeCCCCCCcccccc-ccccCCCCCcEEecCCCCC-ccc--cccccCCCCcc
Q psy8551 261 LKRLEITGASNLTRVRKG-AFADNLNLETLTLNKNPKLKTIEE-GALVGLPNLYHLNLKENAF-TSF--SESMLAWPELR 335 (581)
Q Consensus 261 L~~L~l~~~~~~~~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~-~~~~~~~~L~~L~l~~~~l-~~~--~~~~~~~~~L~ 335 (581)
|+++++++|+.++.-... .+.++..++.+...+|...+.... ..-..++-+.++++..+.. +.. ...-..+..|+
T Consensus 218 L~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq 297 (483)
T KOG4341|consen 218 LKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQ 297 (483)
T ss_pred HHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhh
Confidence 777777776655542221 122344455555555422221110 0112334455555555422 211 11111334555
Q ss_pred eEEccCCCCccCCchhhHHHHHhhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCC
Q psy8551 336 TIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415 (581)
Q Consensus 336 ~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n 415 (581)
.++.+++....+.. -...-.++.+|+.|.+.++
T Consensus 298 ~l~~s~~t~~~d~~-----------------------------------------------l~aLg~~~~~L~~l~l~~c 330 (483)
T KOG4341|consen 298 VLCYSSCTDITDEV-----------------------------------------------LWALGQHCHNLQVLELSGC 330 (483)
T ss_pred hhcccCCCCCchHH-----------------------------------------------HHHHhcCCCceEEEecccc
Confidence 55555542211100 0111234788999999888
Q ss_pred c-CCccChhhh-cCCCCCcEeecCCCcceee--ccccccCCccccEEeecCCCCeeEecCCcc----CCCCCCCeeeCCC
Q psy8551 416 R-LQSIPTKQL-SKLTRLEELEIGQNGFSML--EAGCFKGLSYLKRLEITGASNLTRVRKGAF----ADNLNLETLTLNK 487 (581)
Q Consensus 416 ~-l~~~~~~~l-~~l~~L~~L~l~~~~i~~~--~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~----~~~~~L~~L~l~~ 487 (581)
+ ++......+ .+++.|+.+++..+..... ....-.+++.|+.++++.|..+++.+...+ ..+..|+.+.+++
T Consensus 331 ~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n 410 (483)
T KOG4341|consen 331 QQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDN 410 (483)
T ss_pred chhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecC
Confidence 5 444332333 4678899999888754422 233346789999999998887776643333 3457888999999
Q ss_pred CCCceeecCCccCCCCCccEEEcCCCc-ce--eeccccccCCcceEEec
Q psy8551 488 NPKLKIIEEDALVGLPNLYHLNLKENA-FT--SFSESMLAWPELRTIDI 533 (581)
Q Consensus 488 ~~~l~~~~~~~~~~l~~L~~L~l~~n~-l~--~l~~~~~~~~~L~~L~l 533 (581)
|+.+.+...+.+..+++|+.+++.+|. ++ .+.....++|+++...+
T Consensus 411 ~p~i~d~~Le~l~~c~~Leri~l~~~q~vtk~~i~~~~~~lp~i~v~a~ 459 (483)
T KOG4341|consen 411 CPLITDATLEHLSICRNLERIELIDCQDVTKEAISRFATHLPNIKVHAY 459 (483)
T ss_pred CCCchHHHHHHHhhCcccceeeeechhhhhhhhhHHHHhhCccceehhh
Confidence 988887766677888999999998886 44 23333345666665443
No 52
>KOG1644|consensus
Probab=98.17 E-value=2.2e-06 Score=73.17 Aligned_cols=127 Identities=20% Similarity=0.212 Sum_probs=75.5
Q ss_pred CccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCcc
Q psy8551 46 SIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQN 125 (581)
Q Consensus 46 ~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~ 125 (581)
.=++++|.+.++..+...=.-..+...+||++|.+..++ .|.+++.|..|.+++|.
T Consensus 20 ~e~e~~LR~lkip~ienlg~~~d~~d~iDLtdNdl~~l~--~lp~l~rL~tLll~nNr---------------------- 75 (233)
T KOG1644|consen 20 RERELDLRGLKIPVIENLGATLDQFDAIDLTDNDLRKLD--NLPHLPRLHTLLLNNNR---------------------- 75 (233)
T ss_pred cccccccccccccchhhccccccccceecccccchhhcc--cCCCccccceEEecCCc----------------------
Confidence 345566666666544331113446667777777766655 46677777777777765
Q ss_pred cccccchhhcCCCCCCcEEeCCCCcCcccCC-cccccCccCcEEECCCCcceeccC---CcCCCCCCCcEEEcCCC
Q psy8551 126 RISRIDQACFEGLTALRILYLDDNQLRSVPT-PSFIYLGMLAELRVGLNVFTTLAD---GAFNGLGRLSALDLRGA 197 (581)
Q Consensus 126 ~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~-~~~~~~~~L~~L~L~~n~~~~~~~---~~l~~l~~L~~L~L~~~ 197 (581)
|+.+.+.--.-+++|..|.+.+|++..+.. ..+..|++|++|.+-+|+++.... ..+..+++|+.||+.+-
T Consensus 76 -It~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 76 -ITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred -ceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhhh
Confidence 344444433345667777777776665432 134567777777777776654332 24556666666666553
No 53
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.16 E-value=1.7e-06 Score=55.63 Aligned_cols=40 Identities=23% Similarity=0.310 Sum_probs=32.9
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecC
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP 84 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~ 84 (581)
++|++|++++|+|+++|..+.++++|++|++++|+++.++
T Consensus 1 ~~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp TT-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBEG
T ss_pred CcceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCCc
Confidence 4788999999999999888889999999999999887665
No 54
>KOG1859|consensus
Probab=98.12 E-value=6.4e-08 Score=97.47 Aligned_cols=144 Identities=23% Similarity=0.219 Sum_probs=100.5
Q ss_pred chhhhhhhcCC-CCCCCCCC-ccCCCccccccCCCccCCCC--CCcCccEEEcccCCcccccccccCCCcccEEEcCCCc
Q psy8551 4 DAGQELRSKCM-NPYEPSRF-STRDPSCNLQEANLDVIPSH--SNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTT 79 (581)
Q Consensus 4 ~~~~~~~~~~~-~~c~~~~~-~~~~~~c~~~~~~l~~ip~~--~~~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~ 79 (581)
+|...+..+|= +-|--..| ....+.| .-+.+..+... +.+.++.|+|+.|+++++. .+..+++|++|||+.|.
T Consensus 144 ~Al~~v~ascggd~~ns~~Wn~L~~a~f--syN~L~~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~ 220 (1096)
T KOG1859|consen 144 DALRHVFASCGGDISNSPVWNKLATASF--SYNRLVLMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNC 220 (1096)
T ss_pred HHHHHHHHHhccccccchhhhhHhhhhc--chhhHHhHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccch
Confidence 45555555554 44555556 6778888 66666666554 4589999999999998876 68889999999999999
Q ss_pred eeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCc-c
Q psy8551 80 WLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP-S 158 (581)
Q Consensus 80 l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~-~ 158 (581)
++.+|.-....+. |..|++.+|.. +.+ ..+.++++|+.||++.|-+.+...- .
T Consensus 221 L~~vp~l~~~gc~-L~~L~lrnN~l-----------------------~tL--~gie~LksL~~LDlsyNll~~hseL~p 274 (1096)
T KOG1859|consen 221 LRHVPQLSMVGCK-LQLLNLRNNAL-----------------------TTL--RGIENLKSLYGLDLSYNLLSEHSELEP 274 (1096)
T ss_pred hccccccchhhhh-heeeeecccHH-----------------------Hhh--hhHHhhhhhhccchhHhhhhcchhhhH
Confidence 9988876666666 89999998853 221 1255677788888887766543321 2
Q ss_pred cccCccCcEEECCCCcce
Q psy8551 159 FIYLGMLAELRVGLNVFT 176 (581)
Q Consensus 159 ~~~~~~L~~L~L~~n~~~ 176 (581)
+..+..|+.|.|.+|.+.
T Consensus 275 LwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 275 LWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred HHHHHHHHHHhhcCCccc
Confidence 344567777778777653
No 55
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.98 E-value=5.6e-06 Score=53.26 Aligned_cols=36 Identities=33% Similarity=0.620 Sum_probs=17.0
Q ss_pred CccEEEcCCCcceeeccccccCCcceEEecCCCccc
Q psy8551 504 NLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIE 539 (581)
Q Consensus 504 ~L~~L~l~~n~l~~l~~~~~~~~~L~~L~l~~np~~ 539 (581)
+|++|++++|+|+.+|+.+..+++|++|++++|+++
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCC
Confidence 445555555555555444445555555555555543
No 56
>KOG1644|consensus
Probab=97.93 E-value=1.8e-05 Score=67.80 Aligned_cols=124 Identities=23% Similarity=0.241 Sum_probs=76.6
Q ss_pred cEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCC
Q psy8551 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221 (581)
Q Consensus 142 ~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n 221 (581)
+.+++.+.++..+.. .-....+...++|.+|.+..... |..++.|.+|.+++|+++.+.+.--.-+++|..|.+.+|
T Consensus 22 ~e~~LR~lkip~ien-lg~~~d~~d~iDLtdNdl~~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnN 98 (233)
T KOG1644|consen 22 RELDLRGLKIPVIEN-LGATLDQFDAIDLTDNDLRKLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNN 98 (233)
T ss_pred cccccccccccchhh-ccccccccceecccccchhhccc--CCCccccceEEecCCcceeeccchhhhccccceEEecCc
Confidence 445555555443332 11123456677777777665543 677778888888888888777754445677888888888
Q ss_pred cCCccCc-cccCCCCCCCEEECCCCcccccC---CcccCCCcccceeeecC
Q psy8551 222 RLQSIPT-KQLSKLTRLEELEIGQNGFSMLE---AGCFKGLSYLKRLEITG 268 (581)
Q Consensus 222 ~l~~~~~-~~~~~l~~L~~L~l~~~~~~~~~---~~~~~~~~~L~~L~l~~ 268 (581)
.+..+.. ..+..+|+|++|.+-+|.++... ...+..+++|+.|++++
T Consensus 99 si~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 99 SIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred chhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 7764421 33667778888888777765332 22344555566665554
No 57
>KOG2982|consensus
Probab=97.89 E-value=2.8e-06 Score=76.86 Aligned_cols=211 Identities=20% Similarity=0.236 Sum_probs=111.7
Q ss_pred CCCCCEEeCCCCCCcccccc--ccccCCCCCcEEecCCCCCccccccc-cCCCCcceEEccCCCCccCCchhhHHHHHhh
Q psy8551 283 NLNLETLTLNKNPKLKTIEE--GALVGLPNLYHLNLKENAFTSFSESM-LAWPELRTIDIAENPIECGCNILWLREMLVR 359 (581)
Q Consensus 283 ~~~L~~L~l~~~~~~~~~~~--~~~~~~~~L~~L~l~~~~l~~~~~~~-~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~ 359 (581)
++.++.+++.+| .+.++.. ..+.++|.|+.|+++.|++....... ....+|+.|.+.+..+. |
T Consensus 70 ~~~v~elDL~~N-~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~------w------- 135 (418)
T KOG2982|consen 70 VTDVKELDLTGN-LISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLS------W------- 135 (418)
T ss_pred hhhhhhhhcccc-hhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCC------h-------
Confidence 356667777776 4544432 23456777777777777665333322 34556677766665442 1
Q ss_pred cCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccC--hhhhcC-CCCCcEeec
Q psy8551 360 RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP--TKQLSK-LTRLEELEI 436 (581)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~--~~~l~~-l~~L~~L~l 436 (581)
+. ....+..+|.+++|+++.|++..+. .++... -+.+.+|+.
T Consensus 136 ----------------------------------~~-~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~ 180 (418)
T KOG2982|consen 136 ----------------------------------TQ-STSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQ 180 (418)
T ss_pred ----------------------------------hh-hhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhc
Confidence 00 1122334566777777777443221 111111 123444444
Q ss_pred CCCcceee--ccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeec-CCccCCCCCccEEEcCCC
Q psy8551 437 GQNGFSML--EAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIE-EDALVGLPNLYHLNLKEN 513 (581)
Q Consensus 437 ~~~~i~~~--~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~-~~~~~~l~~L~~L~l~~n 513 (581)
-.|..... ....-..++++..+-+-.|+--+......+..++.+..|+++.+ +++++. .+.+.++++|..|.++++
T Consensus 181 ~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~-~idswasvD~Ln~f~~l~dlRv~~~ 259 (418)
T KOG2982|consen 181 LPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGAN-NIDSWASVDALNGFPQLVDLRVSEN 259 (418)
T ss_pred CCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhhccc-ccccHHHHHHHcCCchhheeeccCC
Confidence 33322110 01111235666666666655433333445566777778888888 555543 356778888888888888
Q ss_pred cceeecc-------ccccCCcceEEecCCCcccccCchh
Q psy8551 514 AFTSFSE-------SMLAWPELRTIDIAENPIECGCNIL 545 (581)
Q Consensus 514 ~l~~l~~-------~~~~~~~L~~L~l~~np~~c~c~~~ 545 (581)
.+..--. -+..++.++.|+=+ .++.+-...
T Consensus 260 Pl~d~l~~~err~llIaRL~~v~vLNGs--kIss~er~d 296 (418)
T KOG2982|consen 260 PLSDPLRGGERRFLLIARLTKVQVLNGS--KISSRERKD 296 (418)
T ss_pred cccccccCCcceEEEEeeccceEEecCc--ccchhhhhh
Confidence 7652111 13346667766544 665554433
No 58
>KOG4579|consensus
Probab=97.79 E-value=1.5e-06 Score=69.26 Aligned_cols=107 Identities=22% Similarity=0.209 Sum_probs=55.9
Q ss_pred ccEEEcccCCcccccc---cccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccC
Q psy8551 47 IQRLVLSTNRIKTVDS---AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFG 123 (581)
Q Consensus 47 l~~L~L~~~~i~~l~~---~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~ 123 (581)
+..++|+.+++.+++. .+.....|+.++|++|.+...|...-..++..+.|++++|.
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~ne-------------------- 88 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNE-------------------- 88 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhh--------------------
Confidence 4455666666554443 33444556666666666666665444444455555555543
Q ss_pred cccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceec
Q psy8551 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178 (581)
Q Consensus 124 ~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~ 178 (581)
+.+++.. +..++.|+.|+++.|.+...+. .+..+.++-+|+..+|....+
T Consensus 89 ---isdvPeE-~Aam~aLr~lNl~~N~l~~~p~-vi~~L~~l~~Lds~~na~~ei 138 (177)
T KOG4579|consen 89 ---ISDVPEE-LAAMPALRSLNLRFNPLNAEPR-VIAPLIKLDMLDSPENARAEI 138 (177)
T ss_pred ---hhhchHH-HhhhHHhhhcccccCccccchH-HHHHHHhHHHhcCCCCccccC
Confidence 3333333 5555666666666655555444 233355555555555544433
No 59
>smart00082 LRRCT Leucine rich repeat C-terminal domain.
Probab=97.75 E-value=1.9e-05 Score=53.24 Aligned_cols=44 Identities=30% Similarity=0.715 Sum_probs=36.8
Q ss_pred CcccccCchhHHHHHHhhc----CCCceeeCCCcccccccccccCcccc
Q psy8551 536 NPIECGCNILWLREMLVRR----NTSAVFCNSPAPLKYKSLISLSAEDL 580 (581)
Q Consensus 536 np~~c~c~~~~~~~~~~~~----~~~~~~c~~~~~~~~~~~~~~~~~~~ 580 (581)
|||.|+|.+.||++|.+.. ....+.|..|..++ .++.+++.+++
T Consensus 1 NP~~CdC~l~~~~~w~~~~~~~~~~~~~~C~~P~~~~-~~l~~~~~~~~ 48 (51)
T smart00082 1 NPFICDCELRWLLRWLQANEHLQDPVSLRCASPSSLR-GPLLELLHSEF 48 (51)
T ss_pred CCccCcCCchHHHHHHHhCCccCCCCCCEeCCcHHHH-hHHHcCCHhhC
Confidence 8999999999999999872 23367899999999 66888887765
No 60
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.61 E-value=7.3e-06 Score=73.27 Aligned_cols=146 Identities=18% Similarity=0.227 Sum_probs=75.3
Q ss_pred cCCCCCCcEEECCCCcCCccCc----cccCCCCCCCEEECCCCcccccCCc-------------ccCCCcccceeeecCC
Q psy8551 207 FRGLSGLRSLVLTDNRLQSIPT----KQLSKLTRLEELEIGQNGFSMLEAG-------------CFKGLSYLKRLEITGA 269 (581)
Q Consensus 207 l~~~~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~~~~~~~~~~-------------~~~~~~~L~~L~l~~~ 269 (581)
+.+||+|+.+++++|.+..-.+ ..+++-+.|++|.+++|.+..+... ...+-|.|+......|
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrN 167 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRN 167 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccc
Confidence 4456666666666665542111 2344455666666666655432211 1223345555555443
Q ss_pred CCcee---ecCccCCCCCCCCEEeCCCCCCccc-----cccccccCCCCCcEEecCCCCCcc-----ccccccCCCCcce
Q psy8551 270 SNLTR---VRKGAFADNLNLETLTLNKNPKLKT-----IEEGALVGLPNLYHLNLKENAFTS-----FSESMLAWPELRT 336 (581)
Q Consensus 270 ~~~~~---~~~~~~~~~~~L~~L~l~~~~~~~~-----~~~~~~~~~~~L~~L~l~~~~l~~-----~~~~~~~~~~L~~ 336 (581)
..-.. .....+....+|+.+.+..| .+.. +....+..+.+|+.|++++|.++. +...+..|+.|++
T Consensus 168 Rlengs~~~~a~~l~sh~~lk~vki~qN-gIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 168 RLENGSKELSAALLESHENLKEVKIQQN-GIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred hhccCcHHHHHHHHHhhcCceeEEeeec-CcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 21110 00111222245666666655 2221 111123456788888888887772 3345667788888
Q ss_pred EEccCCCCccCCchhhH
Q psy8551 337 IDIAENPIECGCNILWL 353 (581)
Q Consensus 337 L~l~~~~~~~~~~~~~l 353 (581)
|.+.+|-++....-..+
T Consensus 247 L~lnDClls~~G~~~v~ 263 (388)
T COG5238 247 LRLNDCLLSNEGVKSVL 263 (388)
T ss_pred ccccchhhccccHHHHH
Confidence 88888877655444443
No 61
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.59 E-value=0.0002 Score=69.92 Aligned_cols=117 Identities=17% Similarity=0.265 Sum_probs=66.0
Q ss_pred CCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCee
Q psy8551 404 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETL 483 (581)
Q Consensus 404 ~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L 483 (581)
+..++.|++++|.++.+| . -.++|++|.++++.--...+..+ .++|++|++++|..+..++. +|+.|
T Consensus 51 ~~~l~~L~Is~c~L~sLP--~--LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP~-------sLe~L 117 (426)
T PRK15386 51 ARASGRLYIKDCDIESLP--V--LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLPE-------SVRSL 117 (426)
T ss_pred hcCCCEEEeCCCCCcccC--C--CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccccccc-------ccceE
Confidence 577778888877777665 1 12357777777653322223222 35677777777655544322 34444
Q ss_pred eCCCCC--CceeecCCccC-----------------CC-CCccEEEcCCCcceeeccccccCCcceEEecCCC
Q psy8551 484 TLNKNP--KLKIIEEDALV-----------------GL-PNLYHLNLKENAFTSFSESMLAWPELRTIDIAEN 536 (581)
Q Consensus 484 ~l~~~~--~l~~~~~~~~~-----------------~l-~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~l~~n 536 (581)
++..+. .++.+|+. +. .+ ++|++|++++|....+|+.+. .+|+.|+++.+
T Consensus 118 ~L~~n~~~~L~~LPss-Lk~L~I~~~n~~~~~~lp~~LPsSLk~L~Is~c~~i~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 118 EIKGSATDSIKNVPNG-LTSLSINSYNPENQARIDNLISPSLKTLSLTGCSNIILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred EeCCCCCcccccCcch-HhheeccccccccccccccccCCcccEEEecCCCcccCccccc--ccCcEEEeccc
Confidence 444321 12333211 10 11 478888888888666665444 57888887765
No 62
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.54 E-value=3e-05 Score=69.44 Aligned_cols=84 Identities=18% Similarity=0.213 Sum_probs=41.9
Q ss_pred CCCCcEEEcCCCCccccCcc----ccCCCCCCcEEECCCCcCCcc-----CccccCCCCCCCEEECCCCcccccC----C
Q psy8551 186 LGRLSALDLRGAGLTNISDN----AFRGLSGLRSLVLTDNRLQSI-----PTKQLSKLTRLEELEIGQNGFSMLE----A 252 (581)
Q Consensus 186 l~~L~~L~L~~~~l~~~~~~----~l~~~~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~l~~~~~~~~~----~ 252 (581)
-|.|+++....|++...+.. .+..-..|+.+.+..|.|..- ....+..+.+|+.|++..|.++... .
T Consensus 156 kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La 235 (388)
T COG5238 156 KPKLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLA 235 (388)
T ss_pred CCCceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHH
Confidence 35566666666665544331 122223566666666655421 1122334566666666666655322 1
Q ss_pred cccCCCcccceeeecCC
Q psy8551 253 GCFKGLSYLKRLEITGA 269 (581)
Q Consensus 253 ~~~~~~~~L~~L~l~~~ 269 (581)
..+..++.|+.|.+..|
T Consensus 236 ~al~~W~~lrEL~lnDC 252 (388)
T COG5238 236 DALCEWNLLRELRLNDC 252 (388)
T ss_pred HHhcccchhhhccccch
Confidence 22344555666666554
No 63
>KOG3665|consensus
Probab=97.51 E-value=3.6e-05 Score=81.69 Aligned_cols=128 Identities=19% Similarity=0.234 Sum_probs=82.6
Q ss_pred CCCCCEEEcCCCcCCccC-hhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCe
Q psy8551 404 LSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLET 482 (581)
Q Consensus 404 ~~~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~ 482 (581)
+|+|+.|.+.+-.+.... .....++|+|..|||++++++.+ .+++.+++|+.|.+.+-..-..-....+.++++|+.
T Consensus 147 LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~v 224 (699)
T KOG3665|consen 147 LPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRV 224 (699)
T ss_pred CcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCe
Confidence 789999999887664322 24567889999999999988877 567888888888887633222122223456788888
Q ss_pred eeCCCCCCceee--c---CCccCCCCCccEEEcCCCccee--eccccccCCcceEEec
Q psy8551 483 LTLNKNPKLKII--E---EDALVGLPNLYHLNLKENAFTS--FSESMLAWPELRTIDI 533 (581)
Q Consensus 483 L~l~~~~~l~~~--~---~~~~~~l~~L~~L~l~~n~l~~--l~~~~~~~~~L~~L~l 533 (581)
||+|.-.....- . .+.-..+|.|+.||.|++.+.. +...+...|+|+.+.+
T Consensus 225 LDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~~ 282 (699)
T KOG3665|consen 225 LDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQIAA 282 (699)
T ss_pred eeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhhhh
Confidence 888876333221 1 1122348888888888887762 2233334555555443
No 64
>KOG4579|consensus
Probab=97.48 E-value=3.6e-06 Score=67.18 Aligned_cols=135 Identities=21% Similarity=0.237 Sum_probs=84.9
Q ss_pred CCCEEEcCCCcCCccCh--hhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCee
Q psy8551 406 GLRSLVLTDNRLQSIPT--KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETL 483 (581)
Q Consensus 406 ~L~~L~l~~n~l~~~~~--~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L 483 (581)
.+..++++.|.+..+.. ..+.....|...+|++|.+...++..-..++.++.+++.+ +.+.+++.+ +..++.|+.|
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~-neisdvPeE-~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLAN-NEISDVPEE-LAAMPALRSL 105 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcch-hhhhhchHH-HhhhHHhhhc
Confidence 35566777776654431 3445556666677777777777666555666677777765 566666544 6777777777
Q ss_pred eCCCCCCceeecCCccCCCCCccEEEcCCCcceeeccccccCCcceEEecCCCcccccCch
Q psy8551 484 TLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNI 544 (581)
Q Consensus 484 ~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~l~~np~~c~c~~ 544 (581)
+++.|+ +... +..+..+.+|-+|+..+|.+..+|..+..-...-..++..+||...|+.
T Consensus 106 Nl~~N~-l~~~-p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 106 NLRFNP-LNAE-PRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred ccccCc-cccc-hHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcccccCcc
Confidence 777773 3333 2345557777788888887777775533222233344566788777764
No 65
>KOG3665|consensus
Probab=97.44 E-value=6.4e-05 Score=79.79 Aligned_cols=79 Identities=13% Similarity=0.092 Sum_probs=35.2
Q ss_pred CcccEEeCCCCCCCCcccccccCCc-ccccccCcccccccc---hhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcE
Q psy8551 92 EKLVELQLNHNKHFPQQIVCSIISP-RRVEIFGQNRISRID---QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 167 (581)
Q Consensus 92 ~~L~~L~l~~n~~~~~~~~~~~~~~-~~L~~l~~~~l~~~~---~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~ 167 (581)
.+|++|++++...+..+.+..++.. ++|+.|..++..-.. .....++|+|++||+++.+++.+. .+.++++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~--GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLS--GISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcH--HHhccccHHH
Confidence 4688888888665544444433332 333322222211111 111234455555555554444441 3444444444
Q ss_pred EECCC
Q psy8551 168 LRVGL 172 (581)
Q Consensus 168 L~L~~ 172 (581)
|.+.+
T Consensus 200 L~mrn 204 (699)
T KOG3665|consen 200 LSMRN 204 (699)
T ss_pred HhccC
Confidence 44443
No 66
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.31 E-value=0.00041 Score=67.86 Aligned_cols=101 Identities=19% Similarity=0.251 Sum_probs=73.3
Q ss_pred hcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCC
Q psy8551 425 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPN 504 (581)
Q Consensus 425 l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~ 504 (581)
+..+.++++|++++|.++.++ .-.++|++|.+.+|+.++.++. .+ .++|+.|++++|..+..+| ++
T Consensus 48 ~~~~~~l~~L~Is~c~L~sLP----~LP~sLtsL~Lsnc~nLtsLP~-~L--P~nLe~L~Ls~Cs~L~sLP-------~s 113 (426)
T PRK15386 48 IEEARASGRLYIKDCDIESLP----VLPNELTEITIENCNNLTTLPG-SI--PEGLEKLTVCHCPEISGLP-------ES 113 (426)
T ss_pred HHHhcCCCEEEeCCCCCcccC----CCCCCCcEEEccCCCCcccCCc-hh--hhhhhheEccCcccccccc-------cc
Confidence 456789999999999888775 2345799999999998866643 33 2589999999997777665 35
Q ss_pred ccEEEcCCCc---ceeeccccccC------------------CcceEEecCCCccc
Q psy8551 505 LYHLNLKENA---FTSFSESMLAW------------------PELRTIDIAENPIE 539 (581)
Q Consensus 505 L~~L~l~~n~---l~~l~~~~~~~------------------~~L~~L~l~~np~~ 539 (581)
|+.|+++.+. +..+|..+..+ ++|++|++++|+..
T Consensus 114 Le~L~L~~n~~~~L~~LPssLk~L~I~~~n~~~~~~lp~~LPsSLk~L~Is~c~~i 169 (426)
T PRK15386 114 VRSLEIKGSATDSIKNVPNGLTSLSINSYNPENQARIDNLISPSLKTLSLTGCSNI 169 (426)
T ss_pred cceEEeCCCCCcccccCcchHhheeccccccccccccccccCCcccEEEecCCCcc
Confidence 7777776654 44565544322 47889999887753
No 67
>KOG2123|consensus
Probab=97.12 E-value=1.3e-05 Score=71.91 Aligned_cols=101 Identities=26% Similarity=0.296 Sum_probs=78.3
Q ss_pred CCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecC-CccCCCCCCCe
Q psy8551 404 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK-GAFADNLNLET 482 (581)
Q Consensus 404 ~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~-~~~~~~~~L~~ 482 (581)
+.+.++|+.++|.++++. ....++.|+.|.|+-|+|+.+.+ +..|+.|++|+|.. |.+.++.. ..+.++++|+.
T Consensus 18 l~~vkKLNcwg~~L~DIs--ic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRk-N~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDIS--ICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRK-NCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCccHHH--HHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHh-cccccHHHHHHHhcCchhhh
Confidence 467889999999998875 36689999999999999998866 78999999999988 45555432 34677889999
Q ss_pred eeCCCCCCceeecCC----ccCCCCCccEEE
Q psy8551 483 LTLNKNPKLKIIEED----ALVGLPNLYHLN 509 (581)
Q Consensus 483 L~l~~~~~l~~~~~~----~~~~l~~L~~L~ 509 (581)
|.|..|+--+..+.. .+.-+|+|+.||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 999998766655432 245578888876
No 68
>KOG3864|consensus
Probab=96.49 E-value=0.00016 Score=62.13 Aligned_cols=84 Identities=17% Similarity=0.217 Sum_probs=52.1
Q ss_pred CcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCC-CCCCCeeeCCCCCCceeecCCccCCCCCccEEE
Q psy8551 431 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD-NLNLETLTLNKNPKLKIIEEDALVGLPNLYHLN 509 (581)
Q Consensus 431 L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~-~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~ 509 (581)
++.++-+++.|...+-..+..+++++.|++.+|..+.+...+.+++ .++|+.|++++|+++++-...++..+++|+.|.
T Consensus 103 IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~ 182 (221)
T KOG3864|consen 103 IEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRLH 182 (221)
T ss_pred EEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHHH
Confidence 4455555555555555555556666666666665555544333332 357777788877777777666677777777777
Q ss_pred cCCCc
Q psy8551 510 LKENA 514 (581)
Q Consensus 510 l~~n~ 514 (581)
+.+=+
T Consensus 183 l~~l~ 187 (221)
T KOG3864|consen 183 LYDLP 187 (221)
T ss_pred hcCch
Confidence 77644
No 69
>KOG2123|consensus
Probab=96.21 E-value=0.00015 Score=65.43 Aligned_cols=78 Identities=23% Similarity=0.326 Sum_probs=34.2
Q ss_pred CCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCc-cccCCCCCCcEEEC
Q psy8551 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD-NAFRGLSGLRSLVL 218 (581)
Q Consensus 140 ~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~-~~l~~~~~L~~L~l 218 (581)
+.+.|++-+++++++. ....++.|++|.|+-|+|+.+.+ +..|++|+.|.|+.|.+.++.. ..+.++++|+.|-|
T Consensus 20 ~vkKLNcwg~~L~DIs--ic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL 95 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDIS--ICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWL 95 (388)
T ss_pred HhhhhcccCCCccHHH--HHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhh
Confidence 3444555555554443 23344555555555555444432 4444444444444444443332 12233444444444
Q ss_pred CCC
Q psy8551 219 TDN 221 (581)
Q Consensus 219 ~~n 221 (581)
..|
T Consensus 96 ~EN 98 (388)
T KOG2123|consen 96 DEN 98 (388)
T ss_pred ccC
Confidence 443
No 70
>KOG2739|consensus
Probab=96.10 E-value=0.0016 Score=58.61 Aligned_cols=106 Identities=22% Similarity=0.268 Sum_probs=56.5
Q ss_pred CCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCC--cceeeccccccCCccccEEeecCCCCeeEe-cCCccCCCCCC
Q psy8551 404 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN--GFSMLEAGCFKGLSYLKRLEITGASNLTRV-RKGAFADNLNL 480 (581)
Q Consensus 404 ~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~--~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~-~~~~~~~~~~L 480 (581)
+..|+.|.+.+..++.+. .+..+++|++|.++.| .+..-.......+++|+++++++|. +..+ .......+++|
T Consensus 42 ~~~le~ls~~n~gltt~~--~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nk-i~~lstl~pl~~l~nL 118 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTLT--NFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNK-IKDLSTLRPLKELENL 118 (260)
T ss_pred ccchhhhhhhccceeecc--cCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCc-cccccccchhhhhcch
Confidence 445666666666666553 4667778888888887 4443323233455777777777743 2221 11123445566
Q ss_pred CeeeCCCCCCceeec---CCccCCCCCccEEEcCCC
Q psy8551 481 ETLTLNKNPKLKIIE---EDALVGLPNLYHLNLKEN 513 (581)
Q Consensus 481 ~~L~l~~~~~l~~~~---~~~~~~l~~L~~L~l~~n 513 (581)
..|++.+|.... +. ...|.-+++|++|+-...
T Consensus 119 ~~Ldl~n~~~~~-l~dyre~vf~ll~~L~~LD~~dv 153 (260)
T KOG2739|consen 119 KSLDLFNCSVTN-LDDYREKVFLLLPSLKYLDGCDV 153 (260)
T ss_pred hhhhcccCCccc-cccHHHHHHHHhhhhcccccccc
Confidence 666666663222 21 112344566666654443
No 71
>KOG2739|consensus
Probab=95.93 E-value=0.0037 Score=56.36 Aligned_cols=58 Identities=24% Similarity=0.340 Sum_probs=25.9
Q ss_pred CCCCcEEEcCCCCccccCc-cccCCCCCCcEEECCCCcCCccCc---cccCCCCCCCEEECC
Q psy8551 186 LGRLSALDLRGAGLTNISD-NAFRGLSGLRSLVLTDNRLQSIPT---KQLSKLTRLEELEIG 243 (581)
Q Consensus 186 l~~L~~L~L~~~~l~~~~~-~~l~~~~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l~ 243 (581)
+++|+++++++|++..+.. ..+..+.+|..|++.+|..+.... ..|.-+++|++|+-.
T Consensus 90 ~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~ 151 (260)
T KOG2739|consen 90 APNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGC 151 (260)
T ss_pred CCceeEEeecCCccccccccchhhhhcchhhhhcccCCccccccHHHHHHHHhhhhcccccc
Confidence 3555555555554442111 113334455555555554443221 223445556555543
No 72
>KOG1947|consensus
Probab=95.84 E-value=0.0018 Score=67.49 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=19.5
Q ss_pred CCCCcEEECCCC-cCCccC-ccccCCCCCCCEEECCC
Q psy8551 210 LSGLRSLVLTDN-RLQSIP-TKQLSKLTRLEELEIGQ 244 (581)
Q Consensus 210 ~~~L~~L~l~~n-~l~~~~-~~~~~~l~~L~~L~l~~ 244 (581)
++.|+.+.+..+ .+.... ......++.|++|++++
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 223 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSG 223 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccC
Confidence 566777766654 233211 12345567777777765
No 73
>KOG1947|consensus
Probab=95.82 E-value=0.0024 Score=66.67 Aligned_cols=36 Identities=33% Similarity=0.400 Sum_probs=16.0
Q ss_pred CcccceeeecCCCCceeec-CccCCCCCCCCEEeCCC
Q psy8551 258 LSYLKRLEITGASNLTRVR-KGAFADNLNLETLTLNK 293 (581)
Q Consensus 258 ~~~L~~L~l~~~~~~~~~~-~~~~~~~~~L~~L~l~~ 293 (581)
++.|+.+.+.++..+.... ......++.|+.++++.
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 223 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSG 223 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccC
Confidence 4555555555544443321 11223344555555544
No 74
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.80 E-value=0.0055 Score=32.54 Aligned_cols=19 Identities=42% Similarity=0.492 Sum_probs=12.4
Q ss_pred CccEEEcCCCcceeecccc
Q psy8551 504 NLYHLNLKENAFTSFSESM 522 (581)
Q Consensus 504 ~L~~L~l~~n~l~~l~~~~ 522 (581)
+|++|++++|+++.+|..+
T Consensus 1 ~L~~Ldls~n~l~~ip~~~ 19 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSSF 19 (22)
T ss_dssp TESEEEETSSEESEEGTTT
T ss_pred CccEEECCCCcCEeCChhh
Confidence 4667777777777666554
No 75
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.59 E-value=0.0069 Score=32.17 Aligned_cols=16 Identities=38% Similarity=0.455 Sum_probs=8.5
Q ss_pred ccEEEcCCCceeecCC
Q psy8551 70 LQHVDLSHTTWLIIPI 85 (581)
Q Consensus 70 L~~L~ls~~~l~~~~~ 85 (581)
|++||+++|+++.+|.
T Consensus 2 L~~Ldls~n~l~~ip~ 17 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPS 17 (22)
T ss_dssp ESEEEETSSEESEEGT
T ss_pred ccEEECCCCcCEeCCh
Confidence 4555555555555554
No 76
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.52 E-value=0.008 Score=29.56 Aligned_cols=17 Identities=47% Similarity=0.722 Sum_probs=8.4
Q ss_pred CCccEEEcCCCcceeec
Q psy8551 503 PNLYHLNLKENAFTSFS 519 (581)
Q Consensus 503 ~~L~~L~l~~n~l~~l~ 519 (581)
++|+.|++++|+|+.+|
T Consensus 1 ~~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 1 PNLRTLDLSNNRLTSLP 17 (17)
T ss_dssp TT-SEEEETSS--SSE-
T ss_pred CccCEEECCCCCCCCCc
Confidence 35667777777666654
No 77
>smart00013 LRRNT Leucine rich repeat N-terminal domain.
Probab=95.43 E-value=0.0091 Score=35.51 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=27.7
Q ss_pred cCCCCCCCCCCccCCCccccccCCCccCCCCCCcCcc
Q psy8551 12 KCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQ 48 (581)
Q Consensus 12 ~~~~~c~~~~~~~~~~~c~~~~~~l~~ip~~~~~~l~ 48 (581)
+||..|.|.. ..+.| ++.+++.||..+|.+.+
T Consensus 1 ~CP~~C~C~~---~~V~C--~~~~L~~vP~~iP~~t~ 32 (33)
T smart00013 1 ACPAPCNCSG---TAVDC--SGRGLTEVPLDLPPDTT 32 (33)
T ss_pred CcCCCCEECC---CEeEe--CCCCcCccCCCCCcccc
Confidence 5999999985 78999 99999999999886543
No 78
>PF01462 LRRNT: Leucine rich repeat N-terminal domain; InterPro: IPR000372 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain and a C-terminal LRR domain (IPR000483 from INTERPRO). This entry represents the N-terminal LRR domain. ; PDB: 3E6J_A 1W8A_A 2V9S_C 2V9T_B 3TWI_D 3ZYN_A 3ZYO_A 1OOK_G 1QYY_G 1SQ0_B ....
Probab=95.22 E-value=0.005 Score=34.95 Aligned_cols=28 Identities=25% Similarity=0.426 Sum_probs=22.4
Q ss_pred cCCCCCCCCCCccCCCccccccCCCccCCCCCC
Q psy8551 12 KCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSN 44 (581)
Q Consensus 12 ~~~~~c~~~~~~~~~~~c~~~~~~l~~ip~~~~ 44 (581)
+||..|.|.. .++.| ++.++++||..+|
T Consensus 1 ~CP~~C~C~~---~~V~C--~~~~L~~vP~~lP 28 (28)
T PF01462_consen 1 ACPRPCTCSG---LTVDC--SGRGLTAVPSDLP 28 (28)
T ss_dssp SSETTSEEET---TEEEE--TTSS-SSS-STS-
T ss_pred CcCCCCEecC---CEeEC--CCCCCCccCCCCc
Confidence 5899999996 88999 9999999998765
No 79
>KOG3864|consensus
Probab=94.43 E-value=0.0041 Score=53.77 Aligned_cols=84 Identities=17% Similarity=0.206 Sum_probs=63.8
Q ss_pred CCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCc-ceeeccccc-cCCccccEEeecCCCCeeEecCCccCCCCCCCee
Q psy8551 406 GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG-FSMLEAGCF-KGLSYLKRLEITGASNLTRVRKGAFADNLNLETL 483 (581)
Q Consensus 406 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~-i~~~~~~~~-~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L 483 (581)
.++.++-+++.+.....+.+..++.++.|.+.+|. +.+.....+ ...++|+.|++++|+.+++-+-..+..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 36778888888887777788888888888887763 333222222 2467899999999999998888888888899998
Q ss_pred eCCCCC
Q psy8551 484 TLNKNP 489 (581)
Q Consensus 484 ~l~~~~ 489 (581)
++.+-+
T Consensus 182 ~l~~l~ 187 (221)
T KOG3864|consen 182 HLYDLP 187 (221)
T ss_pred HhcCch
Confidence 888653
No 80
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=93.70 E-value=0.047 Score=26.78 Aligned_cols=15 Identities=33% Similarity=0.612 Sum_probs=6.1
Q ss_pred CccEEEcccCCcccc
Q psy8551 46 SIQRLVLSTNRIKTV 60 (581)
Q Consensus 46 ~l~~L~L~~~~i~~l 60 (581)
+|+.|+|++|+++.+
T Consensus 2 ~L~~L~l~~n~L~~l 16 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSL 16 (17)
T ss_dssp T-SEEEETSS--SSE
T ss_pred ccCEEECCCCCCCCC
Confidence 455555555555444
No 81
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=92.40 E-value=0.092 Score=29.12 Aligned_cols=22 Identities=36% Similarity=0.638 Sum_probs=16.1
Q ss_pred CCCccEEEcCCCcceeeccccc
Q psy8551 502 LPNLYHLNLKENAFTSFSESML 523 (581)
Q Consensus 502 l~~L~~L~l~~n~l~~l~~~~~ 523 (581)
+++|++|++++|.|+.+|....
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 4577888888888888776543
No 82
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=92.40 E-value=0.092 Score=29.12 Aligned_cols=22 Identities=36% Similarity=0.638 Sum_probs=16.1
Q ss_pred CCCccEEEcCCCcceeeccccc
Q psy8551 502 LPNLYHLNLKENAFTSFSESML 523 (581)
Q Consensus 502 l~~L~~L~l~~n~l~~l~~~~~ 523 (581)
+++|++|++++|.|+.+|....
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 4577888888888888776543
No 83
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=92.31 E-value=0.18 Score=60.67 Aligned_cols=79 Identities=24% Similarity=0.503 Sum_probs=63.0
Q ss_pred ecCCCCCccccc-cccCCCCcceEEccCCCCccCCchhhHHHHHhhcCC-----CceeecCCCcccccccccCCcccccc
Q psy8551 315 NLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRNT-----SAVFCNSPAPLKYKSLISLSAEDLGC 388 (581)
Q Consensus 315 ~l~~~~l~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~ 388 (581)
||++|.|+.++. .|..+++|+.|+|.+|++.|+|.+.|+..+...... ....|..|..++...+..+...++.|
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC~L~WL~~WL~~~~v~v~~~~~i~CasP~~LrG~~L~~l~~~d~~C 80 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDCGLARLPRWAEEKGVKVRQPEAALCAGPGALAGQPLLGIPLLDSGC 80 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccccccccHHHHHHHHhcCccccCCcccCCCCChHHCCCCcccCCcccCCC
Confidence 578999998886 566788999999999999999999999888766642 24569999988888888887777666
Q ss_pred CCCCc
Q psy8551 389 AGAGL 393 (581)
Q Consensus 389 ~~~~~ 393 (581)
....+
T Consensus 81 ~~~y~ 85 (2740)
T TIGR00864 81 DEEYV 85 (2740)
T ss_pred CCcce
Confidence 54443
No 84
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=91.98 E-value=0.086 Score=29.24 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=14.0
Q ss_pred CcccEEEcCCCceeecCCCCCC
Q psy8551 68 LSLQHVDLSHTTWLIIPIGGFE 89 (581)
Q Consensus 68 ~~L~~L~ls~~~l~~~~~~~~~ 89 (581)
++|++|+|++|+|+.++..+|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4666777777777666655443
No 85
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=91.98 E-value=0.086 Score=29.24 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=14.0
Q ss_pred CcccEEEcCCCceeecCCCCCC
Q psy8551 68 LSLQHVDLSHTTWLIIPIGGFE 89 (581)
Q Consensus 68 ~~L~~L~ls~~~l~~~~~~~~~ 89 (581)
++|++|+|++|+|+.++..+|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4666777777777666655443
No 86
>PF01463 LRRCT: Leucine rich repeat C-terminal domain; InterPro: IPR000483 Leucine-rich repeats (LRR, see IPR001611 from INTERPRO) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions []. Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain (IPR000372 from INTERPRO) and a C-terminal LRR domain. This entry represents the C-terminal LRR domain. ; PDB: 3RFE_B 3REZ_D 2WFH_A 2V70_B 2V9S_C 2V9T_B 1W8A_A.
Probab=87.23 E-value=0.31 Score=26.72 Aligned_cols=21 Identities=33% Similarity=0.630 Sum_probs=17.9
Q ss_pred eeeCCCcccccccccccCcccc
Q psy8551 559 VFCNSPAPLKYKSLISLSAEDL 580 (581)
Q Consensus 559 ~~c~~~~~~~~~~~~~~~~~~~ 580 (581)
.+|+.|..++| ++.++.++|+
T Consensus 2 ~~Ca~P~~lrg-~l~~~~~~~f 22 (25)
T PF01463_consen 2 ARCASPPELRG-PLLDLPPSDF 22 (25)
T ss_dssp -BEEESGGGTT-BGGGSSGGG-
T ss_pred CccCCChHHcC-cHhhCCcccC
Confidence 57999999999 9999998875
No 87
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=86.52 E-value=0.41 Score=26.37 Aligned_cols=18 Identities=44% Similarity=0.698 Sum_probs=15.0
Q ss_pred CCccEEEcCCCcceeecc
Q psy8551 503 PNLYHLNLKENAFTSFSE 520 (581)
Q Consensus 503 ~~L~~L~l~~n~l~~l~~ 520 (581)
++|++|++++|+|+++|+
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 468888999999888886
No 88
>KOG4308|consensus
Probab=82.93 E-value=0.0063 Score=62.03 Aligned_cols=37 Identities=24% Similarity=0.519 Sum_probs=23.8
Q ss_pred CCccEEEcCCCcce-----eeccccccCCcceEEecCCCccc
Q psy8551 503 PNLYHLNLKENAFT-----SFSESMLAWPELRTIDIAENPIE 539 (581)
Q Consensus 503 ~~L~~L~l~~n~l~-----~l~~~~~~~~~L~~L~l~~np~~ 539 (581)
..++.++++.|+++ .+.+.+..++.++++.++.|++.
T Consensus 262 ~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 262 ETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred hhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 45667777777665 24455556667777777777764
No 89
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=80.78 E-value=0.97 Score=24.32 Aligned_cols=14 Identities=50% Similarity=0.731 Sum_probs=5.7
Q ss_pred CCccEEEcCCCcce
Q psy8551 503 PNLYHLNLKENAFT 516 (581)
Q Consensus 503 ~~L~~L~l~~n~l~ 516 (581)
++|++|+|++|.|+
T Consensus 2 ~~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 2 PNLETLDLSNNQIT 15 (24)
T ss_dssp TT-SEEE-TSSBEH
T ss_pred CCCCEEEccCCcCC
Confidence 34455555555443
No 90
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=80.77 E-value=1.4 Score=24.46 Aligned_cols=17 Identities=29% Similarity=0.348 Sum_probs=11.2
Q ss_pred CcccEEEcCCCceeecC
Q psy8551 68 LSLQHVDLSHTTWLIIP 84 (581)
Q Consensus 68 ~~L~~L~ls~~~l~~~~ 84 (581)
++|+.|+++.|+|+.+.
T Consensus 2 ~~L~~L~L~~NkI~~IE 18 (26)
T smart00365 2 TNLEELDLSQNKIKKIE 18 (26)
T ss_pred CccCEEECCCCccceec
Confidence 56777777777766544
No 91
>KOG0473|consensus
Probab=79.26 E-value=0.043 Score=48.69 Aligned_cols=93 Identities=17% Similarity=0.235 Sum_probs=63.8
Q ss_pred ccChhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCc
Q psy8551 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDA 498 (581)
Q Consensus 419 ~~~~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 498 (581)
.++...+..+...+.||++.+++...... |+-++.|..|+++.| .+..+| ..
T Consensus 32 ~~~v~ei~~~kr~tvld~~s~r~vn~~~n--------------------------~s~~t~~~rl~~skn-q~~~~~-~d 83 (326)
T KOG0473|consen 32 EIPVREIASFKRVTVLDLSSNRLVNLGKN--------------------------FSILTRLVRLDLSKN-QIKFLP-KD 83 (326)
T ss_pred ccchhhhhccceeeeehhhhhHHHhhccc--------------------------hHHHHHHHHHhccHh-hHhhCh-hh
Confidence 44445555666666677666655443321 333445566666666 666664 34
Q ss_pred cCCCCCccEEEcCCCcceeeccccccCCcceEEecCCCccc
Q psy8551 499 LVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIE 539 (581)
Q Consensus 499 ~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~l~~np~~ 539 (581)
+.....+..+++.+|..+..|.+....+.+++++..+||+.
T Consensus 84 ~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 84 AKQQRETVNAASHKNNHSQQPKSQKKEPHPKKNEQKKTEFF 124 (326)
T ss_pred HHHHHHHHHHHhhccchhhCCccccccCCcchhhhccCcch
Confidence 66777788888899999999988888999999999999863
No 92
>KOG0473|consensus
Probab=79.04 E-value=0.062 Score=47.70 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=48.8
Q ss_pred CcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCcccc
Q psy8551 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202 (581)
Q Consensus 123 ~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~ 202 (581)
+...+++++...+..+...+.||++.|++..... .|.-++.+..|+++.|.+...+. .++....+..+++..|..+..
T Consensus 26 s~s~~s~~~v~ei~~~kr~tvld~~s~r~vn~~~-n~s~~t~~~rl~~sknq~~~~~~-d~~q~~e~~~~~~~~n~~~~~ 103 (326)
T KOG0473|consen 26 SLSELSEIPVREIASFKRVTVLDLSSNRLVNLGK-NFSILTRLVRLDLSKNQIKFLPK-DAKQQRETVNAASHKNNHSQQ 103 (326)
T ss_pred CHHHhcccchhhhhccceeeeehhhhhHHHhhcc-chHHHHHHHHHhccHhhHhhChh-hHHHHHHHHHHHhhccchhhC
Confidence 3334455555555666667777777666555443 34445556666666665544433 233344444444444433322
Q ss_pred CccccCCCCCCcEEECCCCc
Q psy8551 203 SDNAFRGLSGLRSLVLTDNR 222 (581)
Q Consensus 203 ~~~~l~~~~~L~~L~l~~n~ 222 (581)
|.++...++++++++..+.
T Consensus 104 -p~s~~k~~~~k~~e~k~~~ 122 (326)
T KOG0473|consen 104 -PKSQKKEPHPKKNEQKKTE 122 (326)
T ss_pred -CccccccCCcchhhhccCc
Confidence 2234444555555554444
No 93
>KOG4308|consensus
Probab=77.55 E-value=0.022 Score=58.19 Aligned_cols=184 Identities=23% Similarity=0.198 Sum_probs=105.7
Q ss_pred ccEEEcccCCccccc-----ccccCCCcccEEEcCCCceeecC----CCCCCCC-CcccEEeCCCCCCCCcccccccCCc
Q psy8551 47 IQRLVLSTNRIKTVD-----SAIPIYLSLQHVDLSHTTWLIIP----IGGFEPQ-EKLVELQLNHNKHFPQQIVCSIISP 116 (581)
Q Consensus 47 l~~L~L~~~~i~~l~-----~~~~~~~~L~~L~ls~~~l~~~~----~~~~~~l-~~L~~L~l~~n~~~~~~~~~~~~~~ 116 (581)
+.++.|.+|.+.+-. ..+...+.|+.|++++|.+..-. ...+... ..|++|++..|.+.....
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~------- 161 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGA------- 161 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccch-------
Confidence 788899999887432 36677889999999999877211 1223332 567778887776421111
Q ss_pred ccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccC----Cccc----ccCccCcEEECCCCcceecc----CCcCC
Q psy8551 117 RRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVP----TPSF----IYLGMLAELRVGLNVFTTLA----DGAFN 184 (581)
Q Consensus 117 ~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~----~~~~----~~~~~L~~L~L~~n~~~~~~----~~~l~ 184 (581)
......+.....++.++++.|.+.... ...+ ....++++|.+.++.++... ...+.
T Consensus 162 ------------~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~ 229 (478)
T KOG4308|consen 162 ------------APLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLA 229 (478)
T ss_pred ------------HHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHh
Confidence 111223444566666666666553211 1112 23556777777776655211 11233
Q ss_pred CCCC-CcEEEcCCCCccccCc----cccCCC-CCCcEEECCCCcCCccC----ccccCCCCCCCEEECCCCcccc
Q psy8551 185 GLGR-LSALDLRGAGLTNISD----NAFRGL-SGLRSLVLTDNRLQSIP----TKQLSKLTRLEELEIGQNGFSM 249 (581)
Q Consensus 185 ~l~~-L~~L~L~~~~l~~~~~----~~l~~~-~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~~~~~~ 249 (581)
..++ +..+++..|.+.+... ..+..+ ..++.+++..|.++.-. ...+..++.++++.+++|.+..
T Consensus 230 ~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 230 SGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred ccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 3344 5557777776664422 122333 56778888888776422 2445566778888888877653
No 94
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=69.83 E-value=2.9 Score=22.98 Aligned_cols=16 Identities=25% Similarity=0.420 Sum_probs=8.0
Q ss_pred CcceEEecCCCccccc
Q psy8551 526 PELRTIDIAENPIECG 541 (581)
Q Consensus 526 ~~L~~L~l~~np~~c~ 541 (581)
++|++|++++|+-..|
T Consensus 2 ~~L~~L~l~~C~~itD 17 (26)
T smart00367 2 PNLRELDLSGCTNITD 17 (26)
T ss_pred CCCCEeCCCCCCCcCH
Confidence 4455555555554433
No 95
>KOG3763|consensus
Probab=64.14 E-value=2.3 Score=43.25 Aligned_cols=61 Identities=31% Similarity=0.225 Sum_probs=43.6
Q ss_pred CcCccEEEcccCCcccccc---cccCCCcccEEEcCCC--ceeecCCCCCCCCCcccEEeCCCCCC
Q psy8551 44 NPSIQRLVLSTNRIKTVDS---AIPIYLSLQHVDLSHT--TWLIIPIGGFEPQEKLVELQLNHNKH 104 (581)
Q Consensus 44 ~~~l~~L~L~~~~i~~l~~---~~~~~~~L~~L~ls~~--~l~~~~~~~~~~l~~L~~L~l~~n~~ 104 (581)
.+.+..++|++|++..+.. .-...|+|..|+|++| .+.....-.-.....|++|-+.+|++
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPl 282 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPL 282 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCcc
Confidence 4788999999999876653 4457899999999999 44433321112234588999999987
No 96
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=62.57 E-value=5.8 Score=22.32 Aligned_cols=13 Identities=31% Similarity=0.488 Sum_probs=6.2
Q ss_pred CccEEEcCCCcce
Q psy8551 504 NLYHLNLKENAFT 516 (581)
Q Consensus 504 ~L~~L~l~~n~l~ 516 (581)
+|++|+|++|.++
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 4445555555443
No 97
>KOG3763|consensus
Probab=38.51 E-value=15 Score=37.68 Aligned_cols=62 Identities=24% Similarity=0.276 Sum_probs=33.6
Q ss_pred CCCCeeeCCCCCCceeecC--CccCCCCCccEEEcCCC--cceeeccccc--cCCcceEEecCCCccccc
Q psy8551 478 LNLETLTLNKNPKLKIIEE--DALVGLPNLYHLNLKEN--AFTSFSESML--AWPELRTIDIAENPIECG 541 (581)
Q Consensus 478 ~~L~~L~l~~~~~l~~~~~--~~~~~l~~L~~L~l~~n--~l~~l~~~~~--~~~~L~~L~l~~np~~c~ 541 (581)
+.+..+.+++| ++..+.. ......|.|+.|+|++| .+...++ +. ....|++|-+.|||+..+
T Consensus 218 p~i~sl~lsnN-rL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~e-l~K~k~l~Leel~l~GNPlc~t 285 (585)
T KOG3763|consen 218 PEILSLSLSNN-RLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESE-LDKLKGLPLEELVLEGNPLCTT 285 (585)
T ss_pred cceeeeecccc-hhhchhhhhHHHHhcchhheeecccchhhhcchhh-hhhhcCCCHHHeeecCCccccc
Confidence 45555556666 4443321 11233577888888887 3443221 22 234577888888888443
Done!