Query psy8551
Match_columns 581
No_of_seqs 254 out of 3396
Neff 10.6
Searched_HMMs 13730
Date Fri Aug 16 21:46:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8551.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8551hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ozna_ c.10.2.7 (A:) Reticulo 100.0 4.6E-28 3.3E-32 229.8 24.3 246 284-580 32-281 (284)
2 d1xkua_ c.10.2.7 (A:) Decorin 100.0 1.4E-26 1E-30 222.1 28.0 246 10-268 1-251 (305)
3 d1ozna_ c.10.2.7 (A:) Reticulo 100.0 2.9E-27 2.1E-31 224.2 22.1 234 12-269 1-235 (284)
4 d1p9ag_ c.10.2.7 (G:) von Will 99.9 1.2E-25 8.4E-30 210.6 22.1 212 285-554 11-223 (266)
5 d2omza2 c.10.2.1 (A:33-416) In 99.9 7.6E-25 5.5E-29 217.6 28.7 323 137-536 42-383 (384)
6 d2omza2 c.10.2.1 (A:33-416) In 99.9 2E-24 1.5E-28 214.5 31.4 340 45-513 44-383 (384)
7 d1p9ag_ c.10.2.7 (G:) von Will 99.9 1.4E-23 1E-27 196.3 19.9 203 17-248 4-208 (266)
8 d1xkua_ c.10.2.7 (A:) Decorin 99.9 2.1E-22 1.5E-26 192.7 28.6 266 46-345 11-285 (305)
9 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 4.3E-23 3.1E-27 198.3 16.9 249 45-346 50-305 (313)
10 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.9 1.5E-21 1.1E-25 180.0 15.8 228 13-268 1-234 (242)
11 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.9 3.2E-21 2.3E-25 170.3 16.0 169 407-580 10-182 (192)
12 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 9.4E-21 6.9E-25 181.7 15.6 253 211-544 50-309 (313)
13 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.8 2E-19 1.4E-23 158.6 11.8 136 13-176 2-139 (192)
14 d2ifga3 c.10.2.7 (A:36-191) Hi 99.8 4.5E-19 3.3E-23 149.6 12.8 141 432-574 11-155 (156)
15 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 5.3E-16 3.9E-20 151.0 34.2 95 45-176 38-133 (353)
16 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 6.5E-16 4.8E-20 150.3 34.4 179 139-344 38-216 (353)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 1.1E-17 7.7E-22 153.8 14.4 197 47-268 10-210 (242)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 8.2E-17 5.9E-21 146.0 17.8 185 45-267 41-225 (227)
19 d2omxa2 c.10.2.1 (A:37-235) In 99.7 2.1E-16 1.5E-20 139.8 16.2 161 66-263 38-198 (199)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.7E-16 1.2E-20 141.6 15.4 122 136-267 87-208 (210)
21 d2omxa2 c.10.2.1 (A:37-235) In 99.7 4.3E-16 3.1E-20 137.7 15.8 160 45-240 40-199 (199)
22 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 7.6E-16 5.6E-20 139.4 17.2 202 121-341 25-226 (227)
23 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 6.2E-16 4.5E-20 137.9 14.8 164 45-244 46-209 (210)
24 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.6 8.4E-19 6.1E-23 177.7 -6.9 113 45-176 2-125 (460)
25 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.6 5.5E-17 4E-21 164.1 0.8 136 404-541 282-441 (460)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 1.3E-14 9.8E-19 122.6 7.8 108 45-177 18-126 (162)
27 d2astb2 c.10.1.3 (B:2136-2419) 99.5 1.2E-14 8.9E-19 135.9 7.4 183 284-513 46-235 (284)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 4.2E-14 3.1E-18 119.4 9.1 128 135-265 14-145 (162)
29 d1dcea3 c.10.2.2 (A:444-567) R 99.4 1.1E-13 8.3E-18 110.9 8.9 104 48-178 1-105 (124)
30 d2astb2 c.10.1.3 (B:2136-2419) 99.4 4.4E-14 3.2E-18 132.0 5.9 58 187-244 46-104 (284)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.4 8.5E-13 6.2E-17 105.6 10.0 105 142-251 1-106 (124)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 99.3 2.6E-11 1.9E-15 101.3 15.3 123 236-360 9-131 (156)
33 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.2 2.5E-12 1.8E-16 123.9 5.3 149 404-554 157-331 (344)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.2 1.3E-12 9.3E-17 126.0 3.1 251 59-346 22-316 (344)
35 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1.1E-13 7.9E-18 121.3 -5.8 129 45-201 23-154 (198)
36 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 1.3E-12 9.4E-17 114.3 -7.6 114 133-251 42-156 (198)
37 d1koha1 c.10.2.3 (A:201-362) m 98.0 1.4E-07 1E-11 78.7 -3.2 40 137-176 63-104 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 97.9 6.8E-08 5E-12 80.6 -5.6 82 160-241 62-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.6 2.8E-05 2.1E-09 64.5 5.5 42 135-176 40-85 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.4 2.9E-05 2.1E-09 64.5 2.7 60 45-104 15-84 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.7 0.00012 8.5E-09 60.6 -0.2 119 400-540 12-146 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.7 0.00026 1.9E-08 58.4 1.8 41 135-175 42-86 (166)
No 1
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=4.6e-28 Score=229.79 Aligned_cols=246 Identities=24% Similarity=0.386 Sum_probs=209.9
Q ss_pred CCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccc-cccCCCCcceEEccCCCCccCCchhhHHHHHhhcCC
Q psy8551 284 LNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRNT 362 (581)
Q Consensus 284 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~ 362 (581)
.++++|++++| .++.++...|.++++|++++++++.+..++. .+.....++.+.+..+.
T Consensus 32 ~~~~~L~Ls~N-~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~------------------- 91 (284)
T d1ozna_ 32 AASQRIFLHGN-RISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA------------------- 91 (284)
T ss_dssp TTCSEEECTTS-CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT-------------------
T ss_pred CCCCEEECcCC-cCCCCCHHHhhcccccccccccccccccccccccccccccccccccccc-------------------
Confidence 35778888888 6778877778888888888888888876655 33445666766654432
Q ss_pred CceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcce
Q psy8551 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442 (581)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~ 442 (581)
.+..+....|.++++|++|++++|.+.......+..+++|+.+++++|.++
T Consensus 92 -----------------------------~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~ 142 (284)
T d1ozna_ 92 -----------------------------QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142 (284)
T ss_dssp -----------------------------TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred -----------------------------ccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhcccccc
Confidence 123445567888999999999999998888778888999999999999999
Q ss_pred eeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCCcceeec-cc
Q psy8551 443 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFS-ES 521 (581)
Q Consensus 443 ~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~-~~ 521 (581)
.+++..|..++.|++|++.+ +.++.+.+.+|.++++|+.+++++| .+..+.+..|.++++|++|++++|+++.++ ..
T Consensus 143 ~i~~~~f~~~~~L~~L~l~~-N~l~~l~~~~f~~l~~L~~l~l~~N-~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~ 220 (284)
T d1ozna_ 143 ALPDDTFRDLGNLTHLFLHG-NRISSVPERAFRGLHSLDRLLLHQN-RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220 (284)
T ss_dssp CCCTTTTTTCTTCCEEECCS-SCCCEECTTTTTTCTTCCEEECCSS-CCCEECTTTTTTCTTCCEEECCSSCCSCCCHHH
T ss_pred ccChhHhccccchhhccccc-Ccccccchhhhccccccchhhhhhc-cccccChhHhhhhhhcccccccccccccccccc
Confidence 99888899999999999998 4788999999999999999999999 777888899999999999999999999876 56
Q ss_pred cccCCcceEEecCCCcccccCchhHHHHHHhhc--CCCceeeCCCcccccccccccCcccc
Q psy8551 522 MLAWPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSLISLSAEDL 580 (581)
Q Consensus 522 ~~~~~~L~~L~l~~np~~c~c~~~~~~~~~~~~--~~~~~~c~~~~~~~~~~~~~~~~~~~ 580 (581)
+..+++|++|++++||+.|+|.++|+..|+++. ....++|..|..++|+++.+++++||
T Consensus 221 ~~~~~~L~~L~l~~N~l~C~C~~~~l~~~l~~~~~~~~~~~C~~p~~l~g~~l~~l~~~~l 281 (284)
T d1ozna_ 221 LAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDL 281 (284)
T ss_dssp HTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGS
T ss_pred cccccccCEEEecCCCCCCCccchHHHHHHHhCcCCCCceEeCCchHHcCCccccCCHHHC
Confidence 778999999999999999999999999999884 55677899999999999999999998
No 2
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.95 E-value=1.4e-26 Score=222.12 Aligned_cols=246 Identities=22% Similarity=0.363 Sum_probs=160.6
Q ss_pred hhcCCCCCCCCCCccCCCccccccCCCccCCCCCCcCccEEEcccCCcccccc-cccCCCcccEEEcCCCceeecCCCCC
Q psy8551 10 RSKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGF 88 (581)
Q Consensus 10 ~~~~~~~c~~~~~~~~~~~c~~~~~~l~~ip~~~~~~l~~L~L~~~~i~~l~~-~~~~~~~L~~L~ls~~~l~~~~~~~~ 88 (581)
.+.||..|.|.. ..+.| ++.+++++|..+++++++|+|++|+|+.+|. .|.++++|++|++++|.+..+++.+|
T Consensus 1 ~~~~p~~c~c~~---~~~~C--~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f 75 (305)
T d1xkua_ 1 GPVCPFRCQCHL---RVVQC--SDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF 75 (305)
T ss_dssp CCCCCTTCEEET---TEEEC--TTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTT
T ss_pred CCCCCCCCEecC---CEEEe--cCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhh
Confidence 368999999976 67999 9999999999999999999999999999986 79999999999999999999988899
Q ss_pred CCCCcccEEeCCCCCC--CCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCc--ccCCcccccCcc
Q psy8551 89 EPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR--SVPTPSFIYLGM 164 (581)
Q Consensus 89 ~~l~~L~~L~l~~n~~--~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~--~~~~~~~~~~~~ 164 (581)
.++++|++|++++|.+ ++..... ....| .+..|.+..+....+.....+..++...+... ......+..+++
T Consensus 76 ~~l~~L~~L~l~~n~l~~l~~~~~~---~l~~L-~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~ 151 (305)
T d1xkua_ 76 APLVKLERLYLSKNQLKELPEKMPK---TLQEL-RVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 151 (305)
T ss_dssp TTCTTCCEEECCSSCCSBCCSSCCT---TCCEE-ECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTT
T ss_pred hCCCccCEecccCCccCcCccchhh---hhhhh-hccccchhhhhhhhhhccccccccccccccccccCCCccccccccc
Confidence 9999999999999976 2221111 01111 23344555555555555555555555554322 222224445555
Q ss_pred CcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCC
Q psy8551 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244 (581)
Q Consensus 165 L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 244 (581)
|+++++++|.+..++.. .+++|+.|++.+|..+...+..+..++.++.|++++|.++.+++.++..+++|++|++++
T Consensus 152 L~~l~l~~n~l~~l~~~---~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~ 228 (305)
T d1xkua_ 152 LSYIRIADTNITTIPQG---LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNN 228 (305)
T ss_dssp CCEEECCSSCCCSCCSS---CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCS
T ss_pred cCccccccCCccccCcc---cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccc
Confidence 56666655555544322 234555555555555555555555555555555555555555555555555555555555
Q ss_pred CcccccCCcccCCCcccceeeecC
Q psy8551 245 NGFSMLEAGCFKGLSYLKRLEITG 268 (581)
Q Consensus 245 ~~~~~~~~~~~~~~~~L~~L~l~~ 268 (581)
|+++.++. .+..+++|+.|++++
T Consensus 229 N~L~~lp~-~l~~l~~L~~L~Ls~ 251 (305)
T d1xkua_ 229 NKLVKVPG-GLADHKYIQVVYLHN 251 (305)
T ss_dssp SCCSSCCT-TTTTCSSCCEEECCS
T ss_pred cccccccc-ccccccCCCEEECCC
Confidence 55554432 344444555555444
No 3
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=2.9e-27 Score=224.22 Aligned_cols=234 Identities=27% Similarity=0.379 Sum_probs=205.7
Q ss_pred cCCCCCCCCCCccCCCccccccCCCccCCCCCCcCccEEEcccCCcccccc-cccCCCcccEEEcCCCceeecCCCCCCC
Q psy8551 12 KCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEP 90 (581)
Q Consensus 12 ~~~~~c~~~~~~~~~~~c~~~~~~l~~ip~~~~~~l~~L~L~~~~i~~l~~-~~~~~~~L~~L~ls~~~l~~~~~~~~~~ 90 (581)
.||..|.|.......+.| ++.++++||..+|+++++|+|++|+|+.+|. .|.++++|++|++++|++..++...+..
T Consensus 1 ~cp~~C~C~~~~~~~v~c--~~~~L~~iP~~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~ 78 (284)
T d1ozna_ 1 PCPGACVCYNEPKVTTSC--PQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTG 78 (284)
T ss_dssp CCCTTCEEECSSSCEEEC--CSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred CcCCCCEEcCCCCeEEEc--CCCCCCccCCCCCCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccc
Confidence 599999997545667889 9999999999999999999999999999986 7999999999999999999999999999
Q ss_pred CCcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEEC
Q psy8551 91 QEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170 (581)
Q Consensus 91 l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L 170 (581)
+..++.+....+. .++.+.+..|+++++|++|++++|.+..+....+....+|+.+++
T Consensus 79 ~~~~~~l~~~~~~----------------------~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l 136 (284)
T d1ozna_ 79 LALLEQLDLSDNA----------------------QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYL 136 (284)
T ss_dssp CTTCCEEECCSCT----------------------TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccccccccccccc----------------------ccccccchhhcccccCCEEecCCcccccccccccchhcccchhhh
Confidence 9999999887653 355666777899999999999999998888777888899999999
Q ss_pred CCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCccccc
Q psy8551 171 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250 (581)
Q Consensus 171 ~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~ 250 (581)
++|.++.+++..|..+++|+.|++++|++..+.+..|..+++|+.+++.+|+++.+.+..|..+++|++|++++|.+..+
T Consensus 137 ~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~ 216 (284)
T d1ozna_ 137 QDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSAL 216 (284)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred ccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccc
Confidence 99999988888888899999999999999988888888999999999999999988878899999999999999998888
Q ss_pred CCcccCCCcccceeeecCC
Q psy8551 251 EAGCFKGLSYLKRLEITGA 269 (581)
Q Consensus 251 ~~~~~~~~~~L~~L~l~~~ 269 (581)
++..|..+++|+.+++++|
T Consensus 217 ~~~~~~~~~~L~~L~l~~N 235 (284)
T d1ozna_ 217 PTEALAPLRALQYLRLNDN 235 (284)
T ss_dssp CHHHHTTCTTCCEEECCSS
T ss_pred cccccccccccCEEEecCC
Confidence 7777777777777776665
No 4
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=1.2e-25 Score=210.56 Aligned_cols=212 Identities=26% Similarity=0.405 Sum_probs=166.0
Q ss_pred CCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccc-cccCCCCcceEEccCCCCccCCchhhHHHHHhhcCCC
Q psy8551 285 NLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTS 363 (581)
Q Consensus 285 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~ 363 (581)
.+.+++.+++ .++.+|.. +. +++++|++++|.++.++. .+..+++|++|++++|.+..
T Consensus 11 ~~~~v~C~~~-~L~~iP~~-lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~----------------- 69 (266)
T d1p9ag_ 11 SHLEVNCDKR-NLTALPPD-LP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK----------------- 69 (266)
T ss_dssp TCCEEECTTS-CCSSCCSC-CC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-----------------
T ss_pred CCeEEEccCC-CCCeeCcC-cC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-----------------
Confidence 3444555555 45555542 21 357777777777776664 45667777777777775531
Q ss_pred ceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCccee
Q psy8551 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 443 (581)
Q Consensus 364 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~ 443 (581)
++ .+..+++|++|++++|+++..+ ..+..+++|++|+++++.+..
T Consensus 70 --------------------------------l~--~~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~l~~~~~~~ 114 (266)
T d1p9ag_ 70 --------------------------------LQ--VDGTLPVLGTLDLSHNQLQSLP-LLGQTLPALTVLDVSFNRLTS 114 (266)
T ss_dssp --------------------------------EE--CCSCCTTCCEEECCSSCCSSCC-CCTTTCTTCCEEECCSSCCCC
T ss_pred --------------------------------cc--cccccccccccccccccccccc-cccccccccccccccccccce
Confidence 11 1234677888888888877665 457778888888888888888
Q ss_pred eccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCCcceeeccccc
Q psy8551 444 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFSESML 523 (581)
Q Consensus 444 ~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~ 523 (581)
.....+..+.++++|++.+ +.+..+.+..+..+++|+.+++++| .+..+++..+..+++|++|+|++|+|+.+|+.+.
T Consensus 115 ~~~~~~~~l~~l~~L~l~~-n~l~~l~~~~~~~l~~l~~l~l~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~ 192 (266)
T d1p9ag_ 115 LPLGALRGLGELQELYLKG-NELKTLPPGLLTPTPKLEKLSLANN-NLTELPAGLLNGLENLDTLLLQENSLYTIPKGFF 192 (266)
T ss_dssp CCSSTTTTCTTCCEEECTT-SCCCCCCTTTTTTCTTCCEEECTTS-CCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred eeccccccccccccccccc-cccceeccccccccccchhcccccc-cccccCccccccccccceeecccCCCcccChhHC
Confidence 7777788888888888887 4677777788888999999999999 8888888889999999999999999999999999
Q ss_pred cCCcceEEecCCCcccccCchhHHHHHHhhc
Q psy8551 524 AWPELRTIDIAENPIECGCNILWLREMLVRR 554 (581)
Q Consensus 524 ~~~~L~~L~l~~np~~c~c~~~~~~~~~~~~ 554 (581)
.+++|+.|+++||||.|+|+++||.+|+++.
T Consensus 193 ~~~~L~~L~L~~Np~~CdC~~~~l~~wl~~~ 223 (266)
T d1p9ag_ 193 GSHLLPFAFLHGNPWLCNCEILYFRRWLQDN 223 (266)
T ss_dssp TTCCCSEEECCSCCBCCSGGGHHHHHHHHHT
T ss_pred CCCCCCEEEecCCCCCCCcchHHHHHHHHhc
Confidence 9999999999999999999999999999763
No 5
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=7.6e-25 Score=217.56 Aligned_cols=323 Identities=24% Similarity=0.373 Sum_probs=236.4
Q ss_pred CCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEE
Q psy8551 137 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSL 216 (581)
Q Consensus 137 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 216 (581)
.+.+|++|++++++|+.+. .+..+++|++|++++|.++++++ +.++++|++|++++|.+..+.+ +..+++|+.|
T Consensus 42 ~l~~l~~L~l~~~~I~~l~--gl~~L~nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L~~n~i~~i~~--l~~l~~L~~L 115 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 115 (384)
T ss_dssp HHTTCCEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhCCCCEEECCCCCCCCcc--ccccCCCCCEEeCcCCcCCCCcc--ccCCcccccccccccccccccc--cccccccccc
Confidence 4567999999999998874 57789999999999999988864 8899999999999999887654 7889999999
Q ss_pred ECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccC-------------------CCcccceeeecCCCCceeecC
Q psy8551 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK-------------------GLSYLKRLEITGASNLTRVRK 277 (581)
Q Consensus 217 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~-------------------~~~~L~~L~l~~~~~~~~~~~ 277 (581)
++.++.++.+.. ......+.......+.+......... ............+ .....
T Consensus 116 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 190 (384)
T d2omza2 116 TLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSN---KVSDI 190 (384)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSS---CCCCC
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccc---ccccc
Confidence 999998887653 33445566666555544332221111 1111111111111 11112
Q ss_pred ccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccccCCCCcceEEccCCCCccCCchhhHHHHH
Q psy8551 278 GAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREML 357 (581)
Q Consensus 278 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~ 357 (581)
..+..+++++.++++++ .+..+.+ +..+++|+++++++|.++.++ .+..+++|+.+++++|.+..
T Consensus 191 ~~~~~l~~~~~l~l~~n-~i~~~~~--~~~~~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~----------- 255 (384)
T d2omza2 191 SVLAKLTNLESLIATNN-QISDITP--LGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISN----------- 255 (384)
T ss_dssp GGGGGCTTCSEEECCSS-CCCCCGG--GGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCC-----------
T ss_pred cccccccccceeeccCC-ccCCCCc--ccccCCCCEEECCCCCCCCcc-hhhcccccchhccccCccCC-----------
Confidence 23445667777888777 4555543 455677888888888777654 45567778888887776531
Q ss_pred hhcCCCceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChhhhcCCCCCcEeecC
Q psy8551 358 VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 437 (581)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 437 (581)
+ ..+..+++|++|+++++++++.++ +..++.++.+.+.
T Consensus 256 --------------------------------------~--~~~~~~~~L~~L~l~~~~l~~~~~--~~~~~~l~~l~~~ 293 (384)
T d2omza2 256 --------------------------------------L--APLSGLTKLTELKLGANQISNISP--LAGLTALTNLELN 293 (384)
T ss_dssp --------------------------------------C--GGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred --------------------------------------C--CcccccccCCEeeccCcccCCCCc--ccccccccccccc
Confidence 1 135668899999999999987753 7789999999999
Q ss_pred CCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCCccee
Q psy8551 438 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTS 517 (581)
Q Consensus 438 ~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 517 (581)
.+.+++.. .+..+++++.|++++| .+.++. .+..+++|++|++++| .++.++ .++++++|++|++++|++++
T Consensus 294 ~n~l~~~~--~~~~~~~l~~L~ls~n-~l~~l~--~l~~l~~L~~L~L~~n-~l~~l~--~l~~l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 294 ENQLEDIS--PISNLKNLTYLTLYFN-NISDIS--PVSSLTKLQRLFFANN-KVSDVS--SLANLTNINWLSAGHNQISD 365 (384)
T ss_dssp SSCCSCCG--GGGGCTTCSEEECCSS-CCSCCG--GGGGCTTCCEEECCSS-CCCCCG--GGGGCTTCCEEECCSSCCCB
T ss_pred cccccccc--ccchhcccCeEECCCC-CCCCCc--ccccCCCCCEEECCCC-CCCCCh--hHcCCCCCCEEECCCCcCCC
Confidence 99888653 3778899999999985 666654 3788899999999999 777774 48899999999999999998
Q ss_pred eccccccCCcceEEecCCC
Q psy8551 518 FSESMLAWPELRTIDIAEN 536 (581)
Q Consensus 518 l~~~~~~~~~L~~L~l~~n 536 (581)
+++ +..+++|++|++++|
T Consensus 366 l~~-l~~l~~L~~L~L~~N 383 (384)
T d2omza2 366 LTP-LANLTRITQLGLNDQ 383 (384)
T ss_dssp CGG-GTTCTTCSEEECCCE
T ss_pred Chh-hccCCCCCEeeCCCC
Confidence 875 788999999999987
No 6
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=2e-24 Score=214.47 Aligned_cols=340 Identities=25% Similarity=0.353 Sum_probs=194.0
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCc
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ 124 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~ 124 (581)
.++++|+++++.|++++ .+.++++|++|++++|+|+.+++ +.++++|++|++++|.+
T Consensus 44 ~~l~~L~l~~~~I~~l~-gl~~L~nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L~~n~i-------------------- 100 (384)
T d2omza2 44 DQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQI-------------------- 100 (384)
T ss_dssp TTCCEEECCSSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC--------------------
T ss_pred CCCCEEECCCCCCCCcc-ccccCCCCCEEeCcCCcCCCCcc--ccCCccccccccccccc--------------------
Confidence 46777777777777663 46667777777777777776653 66677777777777653
Q ss_pred ccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCc
Q psy8551 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204 (581)
Q Consensus 125 ~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~ 204 (581)
.++. .++++++|+.|+++++.++.... ......+.......+.+........................
T Consensus 101 ---~~i~--~l~~l~~L~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----- 168 (384)
T d2omza2 101 ---ADIT--PLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDL----- 168 (384)
T ss_dssp ---CCCG--GGTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCC-----
T ss_pred ---cccc--ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccchh-----
Confidence 2221 15566677777776666655443 22334444554444444332221111111111111111111
Q ss_pred cccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccCCCCC
Q psy8551 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNL 284 (581)
Q Consensus 205 ~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 284 (581)
..+.............+..... ..+..+++++.+++++|.++.+.+ + ...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~l~~n~i~~~~~--~-------------------------~~~~ 219 (384)
T d2omza2 169 KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--L-------------------------GILT 219 (384)
T ss_dssp GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G-------------------------GGCT
T ss_pred hhhccccccccccccccccccc--cccccccccceeeccCCccCCCCc--c-------------------------cccC
Confidence 1122233333334433332222 224445556666666555443322 1 2234
Q ss_pred CCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccccCCCCcceEEccCCCCccCCchhhHHHHHhhcCCCc
Q psy8551 285 NLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA 364 (581)
Q Consensus 285 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~ 364 (581)
+|+++++++| .+.+++ .+..+++|+.+++.+|.++.+++ +..+++|++++++++.+..
T Consensus 220 ~L~~L~l~~n-~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~~~l~~------------------ 277 (384)
T d2omza2 220 NLDELSLNGN-QLKDIG--TLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISN------------------ 277 (384)
T ss_dssp TCCEEECCSS-CCCCCG--GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCC------------------
T ss_pred CCCEEECCCC-CCCCcc--hhhcccccchhccccCccCCCCc-ccccccCCEeeccCcccCC------------------
Confidence 4555555555 344443 35566667777777776665543 4556677777776665431
Q ss_pred eeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceee
Q psy8551 365 VFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444 (581)
Q Consensus 365 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~ 444 (581)
+ ..+.+++.++.+++.+|.+++.. .+..+++++.|++++|++++.
T Consensus 278 -------------------------------~--~~~~~~~~l~~l~~~~n~l~~~~--~~~~~~~l~~L~ls~n~l~~l 322 (384)
T d2omza2 278 -------------------------------I--SPLAGLTALTNLELNENQLEDIS--PISNLKNLTYLTLYFNNISDI 322 (384)
T ss_dssp -------------------------------C--GGGTTCTTCSEEECCSSCCSCCG--GGGGCTTCSEEECCSSCCSCC
T ss_pred -------------------------------C--Ccccccccccccccccccccccc--ccchhcccCeEECCCCCCCCC
Confidence 0 12344666777777777776643 366777777777777777765
Q ss_pred ccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCC
Q psy8551 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKEN 513 (581)
Q Consensus 445 ~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n 513 (581)
.+ +..+++|++|++++| .++.+. .+.++++|++|++++| .+..+++ +.++++|++|+|++|
T Consensus 323 ~~--l~~l~~L~~L~L~~n-~l~~l~--~l~~l~~L~~L~l~~N-~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 323 SP--VSSLTKLQRLFFANN-KVSDVS--SLANLTNINWLSAGHN-QISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp GG--GGGCTTCCEEECCSS-CCCCCG--GGGGCTTCCEEECCSS-CCCBCGG--GTTCTTCSEEECCCE
T ss_pred cc--cccCCCCCEEECCCC-CCCCCh--hHcCCCCCCEEECCCC-cCCCChh--hccCCCCCEeeCCCC
Confidence 43 667777888888775 555543 4777888888888888 6666654 788899999999887
No 7
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=1.4e-23 Score=196.27 Aligned_cols=203 Identities=26% Similarity=0.318 Sum_probs=176.8
Q ss_pred CCCCCC-ccCCCccccccCCCccCCCCCCcCccEEEcccCCcccccc-cccCCCcccEEEcCCCceeecCCCCCCCCCcc
Q psy8551 17 YEPSRF-STRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94 (581)
Q Consensus 17 c~~~~~-~~~~~~c~~~~~~l~~ip~~~~~~l~~L~L~~~~i~~l~~-~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L 94 (581)
|.|... +..+|.| ++.++++||..+|+++++|+|++|.|+.++. .|.++++|++|+|++|+|+.++. +..+++|
T Consensus 4 C~~~~~~~~~~v~C--~~~~L~~iP~~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~--~~~l~~L 79 (266)
T d1p9ag_ 4 CEVSKVASHLEVNC--DKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVL 79 (266)
T ss_dssp SEEECSTTCCEEEC--TTSCCSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTC
T ss_pred cEEcccCCCeEEEc--cCCCCCeeCcCcCcCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc--ccccccc
Confidence 566554 4566899 9999999999999999999999999999985 78999999999999999999874 5788999
Q ss_pred cEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCc
Q psy8551 95 VELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174 (581)
Q Consensus 95 ~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~ 174 (581)
++|++++|.+ +.. +..+..+++|+.|+++++.+..++...+..+.++++|++++|.
T Consensus 80 ~~L~Ls~N~l-----------------------~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~ 135 (266)
T d1p9ag_ 80 GTLDLSHNQL-----------------------QSL-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (266)
T ss_dssp CEEECCSSCC-----------------------SSC-CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred cccccccccc-----------------------ccc-ccccccccccccccccccccceeeccccccccccccccccccc
Confidence 9999999874 222 2236788999999999999999888888889999999999999
Q ss_pred ceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCccc
Q psy8551 175 FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248 (581)
Q Consensus 175 ~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~ 248 (581)
+..+++..+..+++++.+++++|+++.+.+..|..+++|++|++++|+++.+|. .+..+++|+.|++++|++.
T Consensus 136 l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~-~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPK-GFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCT-TTTTTCCCSEEECCSCCBC
T ss_pred cceeccccccccccchhcccccccccccCccccccccccceeecccCCCcccCh-hHCCCCCCCEEEecCCCCC
Confidence 999888888889999999999999999888888899999999999999998885 4556889999999998754
No 8
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91 E-value=2.1e-22 Score=192.71 Aligned_cols=266 Identities=27% Similarity=0.422 Sum_probs=226.1
Q ss_pred CccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCcc
Q psy8551 46 SIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQN 125 (581)
Q Consensus 46 ~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~ 125 (581)
..+.++-++..++.+|..+. +++++|++++|+|+.++..+|.++++|++|++++|.
T Consensus 11 ~~~~~~C~~~~L~~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~---------------------- 66 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNK---------------------- 66 (305)
T ss_dssp ETTEEECTTSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC----------------------
T ss_pred cCCEEEecCCCCCccCCCCC--CCCCEEECcCCcCCCcChhHhhcccccccccccccc----------------------
Confidence 67788999999999998663 789999999999999998899999999999999986
Q ss_pred cccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCcc--ccC
Q psy8551 126 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT--NIS 203 (581)
Q Consensus 126 ~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~--~~~ 203 (581)
+..+.+.+|.++++|++|++++|+++.++.. ....++.|.+..|.+..+....+.....++.++...+... ...
T Consensus 67 -~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~---~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~ 142 (305)
T d1xkua_ 67 -ISKISPGAFAPLVKLERLYLSKNQLKELPEK---MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIE 142 (305)
T ss_dssp -CCCBCTTTTTTCTTCCEEECCSSCCSBCCSS---CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBC
T ss_pred -ccccchhhhhCCCccCEecccCCccCcCccc---hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCC
Confidence 4556677799999999999999999988763 2467889999999998887766777888889998877433 333
Q ss_pred ccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccCCCC
Q psy8551 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADN 283 (581)
Q Consensus 204 ~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 283 (581)
...+..+++|+.+++.+|.++.++.. .+++|++|++++|......+..+..++.++.|.++++ .+..+....+..+
T Consensus 143 ~~~~~~l~~L~~l~l~~n~l~~l~~~---~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n-~l~~~~~~~~~~l 218 (305)
T d1xkua_ 143 NGAFQGMKKLSYIRIADTNITTIPQG---LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN-SISAVDNGSLANT 218 (305)
T ss_dssp TTGGGGCTTCCEEECCSSCCCSCCSS---CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSS-CCCEECTTTGGGS
T ss_pred ccccccccccCccccccCCccccCcc---cCCccCEEECCCCcCCCCChhHhhccccccccccccc-ccccccccccccc
Confidence 45677889999999999999988743 3578999999999999888888999999999999886 7788888889999
Q ss_pred CCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCcccccc-------ccCCCCcceEEccCCCCc
Q psy8551 284 LNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSES-------MLAWPELRTIDIAENPIE 345 (581)
Q Consensus 284 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~-------~~~~~~L~~L~l~~~~~~ 345 (581)
++|++|++++| .+..++. .+..+++|+.|++++|+++.++.. ......|+.+++.+|++.
T Consensus 219 ~~L~~L~L~~N-~L~~lp~-~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 219 PHLRELHLNNN-KLVKVPG-GLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp TTCCEEECCSS-CCSSCCT-TTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ccceeeecccc-ccccccc-ccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 99999999999 7888876 688999999999999999987642 234578999999999875
No 9
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.89 E-value=4.3e-23 Score=198.28 Aligned_cols=249 Identities=18% Similarity=0.193 Sum_probs=174.6
Q ss_pred cCccEEEcccCCcc---cccccccCCCcccEEEcCC-Ccee-ecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccc
Q psy8551 45 PSIQRLVLSTNRIK---TVDSAIPIYLSLQHVDLSH-TTWL-IIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRV 119 (581)
Q Consensus 45 ~~l~~L~L~~~~i~---~l~~~~~~~~~L~~L~ls~-~~l~-~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L 119 (581)
.++++|+|+++.+. .+|..+.++++|++|+|++ |++. .+| ..+.++++|++|++++|.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP-~~i~~L~~L~~L~Ls~N~---------------- 112 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP-PAIAKLTQLHYLYITHTN---------------- 112 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCC-GGGGGCTTCSEEEEEEEC----------------
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccc-cccccccccchhhhcccc----------------
Confidence 48999999999887 4788999999999999986 6777 454 568888888888888875
Q ss_pred cccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCC-cEEEcCCCC
Q psy8551 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL-SALDLRGAG 198 (581)
Q Consensus 120 ~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L-~~L~L~~~~ 198 (581)
+..+.+..+..+..|+.+++++|.+....+..+..+++++++++++|.+.+..+..+..+..+ +.+++.+|+
T Consensus 113 -------l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~ 185 (313)
T d1ogqa_ 113 -------VSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp -------CEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE
T ss_pred -------ccccccccccchhhhcccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccc
Confidence 344445556777888888888887776665677778888888888887776655555555554 667777777
Q ss_pred ccccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCc
Q psy8551 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278 (581)
Q Consensus 199 l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 278 (581)
+++..+..+..+.. ..+++..+......+..+..+++++.++++++.+...++
T Consensus 186 l~~~~~~~~~~l~~-~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-------------------------- 238 (313)
T d1ogqa_ 186 LTGKIPPTFANLNL-AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-------------------------- 238 (313)
T ss_dssp EEEECCGGGGGCCC-SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG--------------------------
T ss_pred cccccccccccccc-ccccccccccccccccccccccccccccccccccccccc--------------------------
Confidence 76666555554433 356666666655555556666666666666665543322
Q ss_pred cCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCc-cccccccCCCCcceEEccCCCCcc
Q psy8551 279 AFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFT-SFSESMLAWPELRTIDIAENPIEC 346 (581)
Q Consensus 279 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~-~~~~~~~~~~~L~~L~l~~~~~~~ 346 (581)
.+...++|+.|++++|...+.+|. .++++++|++|++++|+++ .+| .+..+++|+.+++.+|+.-|
T Consensus 239 ~~~~~~~L~~L~Ls~N~l~g~iP~-~l~~L~~L~~L~Ls~N~l~g~iP-~~~~L~~L~~l~l~~N~~l~ 305 (313)
T d1ogqa_ 239 KVGLSKNLNGLDLRNNRIYGTLPQ-GLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp GCCCCTTCCEEECCSSCCEECCCG-GGGGCTTCCEEECCSSEEEEECC-CSTTGGGSCGGGTCSSSEEE
T ss_pred ccccccccccccCccCeecccCCh-HHhCCCCCCEEECcCCcccccCC-CcccCCCCCHHHhCCCcccc
Confidence 233445677777777744445655 5778888888888888887 454 45667788888888886543
No 10
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.5e-21 Score=180.01 Aligned_cols=228 Identities=20% Similarity=0.296 Sum_probs=184.9
Q ss_pred CCCC-CCCCCCccCCCccccccCCCccCCCCCCcCccEEEcccCCcccccc-cccCCCcccEEEcCCCcee-ecCCCCCC
Q psy8551 13 CMNP-YEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWL-IIPIGGFE 89 (581)
Q Consensus 13 ~~~~-c~~~~~~~~~~~c~~~~~~l~~ip~~~~~~l~~L~L~~~~i~~l~~-~~~~~~~L~~L~ls~~~l~-~~~~~~~~ 89 (581)
|+.. |.|.. +.+.| ++.+++++|..+++++++|+|++|.|+.+|. .|.++++|++|++++|.+. .++..+|.
T Consensus 1 ~~~~~C~C~~---~~i~c--~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~ 75 (242)
T d1xwdc1 1 CHHRICHCSN---RVFLC--QESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFS 75 (242)
T ss_dssp CCCSSEEECS---SEEEE--ESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEE
T ss_pred CcCCcCCCcC---CEEEE--eCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccc
Confidence 5544 88876 68999 9999999999999999999999999999986 6899999999999999876 46777899
Q ss_pred CCCcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcc-cccCccCcEE
Q psy8551 90 PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS-FIYLGMLAEL 168 (581)
Q Consensus 90 ~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~-~~~~~~L~~L 168 (581)
++++++++.+..+. .+....+..|.++++|++++++++.+...+... +..+..+..+
T Consensus 76 ~l~~l~~l~~~~~n----------------------~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~ 133 (242)
T d1xwdc1 76 NLPKLHEIRIEKAN----------------------NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLD 133 (242)
T ss_dssp SCTTCCEEEEECCT----------------------TCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEE
T ss_pred cccccccccccccc----------------------cccccccccccccccccccccchhhhcccccccccccccccccc
Confidence 99999999887643 255566677899999999999999988765432 3445666666
Q ss_pred ECCCCcceeccCCcCCCCC-CCcEEEcCCCCccccCccccCCCCCCcEE-ECCCCcCCccCccccCCCCCCCEEECCCCc
Q psy8551 169 RVGLNVFTTLADGAFNGLG-RLSALDLRGAGLTNISDNAFRGLSGLRSL-VLTDNRLQSIPTKQLSKLTRLEELEIGQNG 246 (581)
Q Consensus 169 ~L~~n~~~~~~~~~l~~l~-~L~~L~L~~~~l~~~~~~~l~~~~~L~~L-~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~ 246 (581)
...++.+..+....+.+++ .++.+++.+++++.+....+. ..++..+ .+.+|+++.++...|..+++|++|++++|+
T Consensus 134 ~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~ 212 (242)
T d1xwdc1 134 IQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR 212 (242)
T ss_dssp EESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSC
T ss_pred cccccccccccccccccccccceeeeccccccccccccccc-chhhhccccccccccccccHHHhcCCCCCCEEECCCCc
Confidence 7777788888777777764 789999999999988776554 4455444 578889999988889999999999999999
Q ss_pred ccccCCcccCCCcccceeeecC
Q psy8551 247 FSMLEAGCFKGLSYLKRLEITG 268 (581)
Q Consensus 247 ~~~~~~~~~~~~~~L~~L~l~~ 268 (581)
++.++...|.+++.|+.+++.+
T Consensus 213 l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 213 IHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp CCCCCSSSCTTCCEEESSSEES
T ss_pred CCccCHHHHcCCcccccCcCCC
Confidence 9988887788877777776654
No 11
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.86 E-value=3.2e-21 Score=170.25 Aligned_cols=169 Identities=26% Similarity=0.476 Sum_probs=146.9
Q ss_pred CCEEEcCCCcCCccChhhhcCCCCCcEeecCCCccee-eccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeC
Q psy8551 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM-LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTL 485 (581)
Q Consensus 407 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~-~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l 485 (581)
.+.++.++++++.+|.. + .+++++|+|++|.++. .....|..+++|++|++++ +.+..+.+..|..+++|++|++
T Consensus 10 ~~~v~Cs~~~L~~iP~~-l--p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~-N~i~~~~~~~~~~~~~L~~L~L 85 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRD-I--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKR-NQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp TTEEECTTSCCSSCCSC-C--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCS-SCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCEEEEeCCCcCccCCC-C--CCCCCEEEeCCCCCcccccccccCCCceEeeeeccc-cccccccccccccccccceeee
Confidence 45788888888888742 3 2678899999999975 5677788899999999987 5777888888999999999999
Q ss_pred CCCCCceeecCCccCCCCCccEEEcCCCcceeeccc-cccCCcceEEecCCCcccccCchhHHHHHHhhc--CCCceeeC
Q psy8551 486 NKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFSES-MLAWPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCN 562 (581)
Q Consensus 486 ~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~-~~~~~~L~~L~l~~np~~c~c~~~~~~~~~~~~--~~~~~~c~ 562 (581)
++| .+..+++..|.++++|++|+|++|.|+.+++. +..+++|+++++++||+.|+|++.|+.+|++.. ....++|.
T Consensus 86 s~N-~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~~~~l~~~~~~c~ 164 (192)
T d1w8aa_ 86 GEN-KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CSC-CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred ccc-cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhhhhhhhcccCCCeEeC
Confidence 999 89999999999999999999999999998754 668999999999999999999999999998773 45667899
Q ss_pred CCcccccccccccCcccc
Q psy8551 563 SPAPLKYKSLISLSAEDL 580 (581)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~ 580 (581)
.|..++|..+.+++.+++
T Consensus 165 ~p~~l~~~~l~~L~~n~l 182 (192)
T d1w8aa_ 165 APSKVRDVQIKDLPHSEF 182 (192)
T ss_dssp SSTTTTTSBGGGSCTTTC
T ss_pred CChhhcCCEeeecCHhhC
Confidence 999999999999999886
No 12
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.84 E-value=9.4e-21 Score=181.71 Aligned_cols=253 Identities=22% Similarity=0.249 Sum_probs=162.0
Q ss_pred CCCcEEECCCCcCCc---cCccccCCCCCCCEEECCC-CcccccCCcccCCCcccceeeecCCCCceeecCccCCCCCCC
Q psy8551 211 SGLRSLVLTDNRLQS---IPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNL 286 (581)
Q Consensus 211 ~~L~~L~l~~n~l~~---~~~~~~~~l~~L~~L~l~~-~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L 286 (581)
.+++.|+++++.+++ +| ..++++++|++|++++ |.+.+..+..++++++|++|++++| .+....+..+.....|
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp-~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N-~l~~~~~~~~~~~~~L 127 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIP-SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT-NVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSSCEECC-GGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEE-CCEEECCGGGGGCTTC
T ss_pred EEEEEEECCCCCCCCCCCCC-hHHhcCccccccccccccccccccccccccccccchhhhccc-cccccccccccchhhh
Confidence 357788888887774 34 5678888888888875 6666544555666666666666654 2333333334444444
Q ss_pred CEEeCCCCCCccccccccccCCCCCcEEecCCCCCc-cccccccCCCCcceEEccCCCCccCCchhhHHHHHhhcCCCce
Q psy8551 287 ETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFT-SFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 365 (581)
Q Consensus 287 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 365 (581)
+. ++++.|.+. .+|..+..++.++.+++++|.+.+.
T Consensus 128 ~~-------------------------l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~------------------ 164 (313)
T d1ogqa_ 128 VT-------------------------LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGA------------------ 164 (313)
T ss_dssp CE-------------------------EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEE------------------
T ss_pred cc-------------------------cccccccccccCchhhccCcccceeeccccccccc------------------
Confidence 44 444444433 2334444555555555555443210
Q ss_pred eecCCCcccccccccCCccccccCCCCccccCccccCCCCC-CCEEEcCCCcCCccChhhhcCCCCCcEeecCCCcceee
Q psy8551 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG-LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444 (581)
Q Consensus 366 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~-L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~~~i~~~ 444 (581)
++ ..+..+.. ++.+++++|++++..+..+..+..+ .+++.++...+.
T Consensus 165 ------------------------------ip-~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~ 212 (313)
T d1ogqa_ 165 ------------------------------IP-DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGD 212 (313)
T ss_dssp ------------------------------CC-GGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEEC
T ss_pred ------------------------------cc-cccccccccccccccccccccccccccccccccc-cccccccccccc
Confidence 01 11112222 3666667777766665556555444 577777777777
Q ss_pred ccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCCcce-eeccccc
Q psy8551 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENAFT-SFSESML 523 (581)
Q Consensus 445 ~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~ 523 (581)
.+..+..+++++.+++.++ .+.... ..+..+++|+.|++++|+..+.+ |..++++++|++|+|++|+|+ .+| .+.
T Consensus 213 ~~~~~~~~~~l~~l~~~~~-~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~i-P~~l~~L~~L~~L~Ls~N~l~g~iP-~~~ 288 (313)
T d1ogqa_ 213 ASVLFGSDKNTQKIHLAKN-SLAFDL-GKVGLSKNLNGLDLRNNRIYGTL-PQGLTQLKFLHSLNVSFNNLCGEIP-QGG 288 (313)
T ss_dssp CGGGCCTTSCCSEEECCSS-EECCBG-GGCCCCTTCCEEECCSSCCEECC-CGGGGGCTTCCEEECCSSEEEEECC-CST
T ss_pred ccccccccccccccccccc-cccccc-cccccccccccccCccCeecccC-ChHHhCCCCCCEEECcCCcccccCC-Ccc
Confidence 7777777778888887764 333332 34677889999999999444466 466899999999999999999 566 457
Q ss_pred cCCcceEEecCCCcccccCch
Q psy8551 524 AWPELRTIDIAENPIECGCNI 544 (581)
Q Consensus 524 ~~~~L~~L~l~~np~~c~c~~ 544 (581)
.+.+|+.+++++|+..|+.++
T Consensus 289 ~L~~L~~l~l~~N~~l~g~pl 309 (313)
T d1ogqa_ 289 NLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTS
T ss_pred cCCCCCHHHhCCCccccCCCC
Confidence 788999999999998887654
No 13
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.79 E-value=2e-19 Score=158.57 Aligned_cols=136 Identities=28% Similarity=0.352 Sum_probs=111.7
Q ss_pred CCCCCCCCCCccCCCccccccCCCccCCCCCCcCccEEEcccCCccc-cc-ccccCCCcccEEEcCCCceeecCCCCCCC
Q psy8551 13 CMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKT-VD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEP 90 (581)
Q Consensus 13 ~~~~c~~~~~~~~~~~c~~~~~~l~~ip~~~~~~l~~L~L~~~~i~~-l~-~~~~~~~~L~~L~ls~~~l~~~~~~~~~~ 90 (581)
||..|+|.. +.+.| ++.++++||..+|+++++|+|++|+|+. ++ ..|.++++|++|++++|.+..++...|..
T Consensus 2 CP~~C~C~~---~~v~C--s~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~ 76 (192)
T d1w8aa_ 2 CPAMCHCEG---TTVDC--TGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG 76 (192)
T ss_dssp CCTTSEEET---TEEEC--TTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTT
T ss_pred cCCCCEEcC---CEEEE--eCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccccc
Confidence 999999987 68999 9999999999999999999999999975 43 46788999999999999998888888888
Q ss_pred CCcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEEC
Q psy8551 91 QEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170 (581)
Q Consensus 91 l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L 170 (581)
+++|++|++++|. ++.+++.+|.++++|++|++++|.++.++..+|..+++|++|+|
T Consensus 77 ~~~L~~L~Ls~N~-----------------------l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L 133 (192)
T d1w8aa_ 77 ASHIQELQLGENK-----------------------IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNL 133 (192)
T ss_dssp CTTCCEEECCSCC-----------------------CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEEC
T ss_pred ccccceeeecccc-----------------------ccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccc
Confidence 8888888888875 45566666777777777777777777777766777777777777
Q ss_pred CCCcce
Q psy8551 171 GLNVFT 176 (581)
Q Consensus 171 ~~n~~~ 176 (581)
++|.+.
T Consensus 134 ~~N~~~ 139 (192)
T d1w8aa_ 134 ASNPFN 139 (192)
T ss_dssp TTCCBC
T ss_pred cccccc
Confidence 776654
No 14
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=4.5e-19 Score=149.57 Aligned_cols=141 Identities=24% Similarity=0.337 Sum_probs=114.7
Q ss_pred cEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcC
Q psy8551 432 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLK 511 (581)
Q Consensus 432 ~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~ 511 (581)
+.++++++.+... +..+..+++|++|++.+++.++.+.+..|.++++|+.|++++| .++.+++.+|..+++|++|+|+
T Consensus 11 ~~l~c~~~~~~~~-p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 11 SGLRCTRDGALDS-LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS-GLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SCEECCSSCCCTT-TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSS-CCCEECTTGGGSCSCCCEEECC
T ss_pred CeEEecCCCCccC-cccccCccccCeeecCCCccccccCchhhccccccCcceeecc-ccCCcccccccccccccceecc
Confidence 3444444444433 2234456677777777666788888888888999999999999 8999998999999999999999
Q ss_pred CCcceeeccccccCCcceEEecCCCcccccCchhHHHHHHhhc----CCCceeeCCCcccccccccc
Q psy8551 512 ENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRR----NTSAVFCNSPAPLKYKSLIS 574 (581)
Q Consensus 512 ~n~l~~l~~~~~~~~~L~~L~l~~np~~c~c~~~~~~~~~~~~----~~~~~~c~~~~~~~~~~~~~ 574 (581)
+|+|+.++..+....+|+.|++++|||.|+|+++||..|.... ....+.|..|..++|.|-..
T Consensus 89 ~N~l~~l~~~~~~~~~l~~L~L~~Np~~C~C~~~~l~~~~~~~~~~~~~~~~~C~~p~~l~~~p~~~ 155 (156)
T d2ifga3 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHMPNAS 155 (156)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSSCSSCCCCTT
T ss_pred CCCCcccChhhhccccccccccCCCcccCCchHHHHHHHHHhccCccCcCCcEECcChHHCcCCccc
Confidence 9999999988877778999999999999999999999999764 34567899999999987554
No 15
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.77 E-value=5.3e-16 Score=150.95 Aligned_cols=95 Identities=19% Similarity=0.223 Sum_probs=57.8
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCc
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ 124 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~ 124 (581)
.++++|+|+++.++.+|+. .++|++|++++|+|+.+|.. ..+|++|++++|.+
T Consensus 38 ~~l~~LdLs~~~L~~lp~~---~~~L~~L~Ls~N~l~~lp~~----~~~L~~L~l~~n~l-------------------- 90 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPEL---PPHLESLVASCNSLTELPEL----PQSLKSLLVDNNNL-------------------- 90 (353)
T ss_dssp HTCSEEECTTSCCSCCCSC---CTTCSEEECCSSCCSSCCCC----CTTCCEEECCSSCC--------------------
T ss_pred cCCCEEEeCCCCCCCCCCC---CCCCCEEECCCCCCcccccc----hhhhhhhhhhhccc--------------------
Confidence 4677888888888887753 46778888888887777632 34677777777643
Q ss_pred ccccccchhhcCCC-CCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcce
Q psy8551 125 NRISRIDQACFEGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 176 (581)
Q Consensus 125 ~~l~~~~~~~l~~~-~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~ 176 (581)
+.+ ..+ +.|++|++++|.+..++. ++.+++|++|++.++.+.
T Consensus 91 ---~~l-----~~lp~~L~~L~L~~n~l~~lp~--~~~l~~L~~L~l~~~~~~ 133 (353)
T d1jl5a_ 91 ---KAL-----SDLPPLLEYLGVSNNQLEKLPE--LQNSSFLKIIDVDNNSLK 133 (353)
T ss_dssp ---SCC-----CSCCTTCCEEECCSSCCSSCCC--CTTCTTCCEEECCSSCCS
T ss_pred ---chh-----hhhccccccccccccccccccc--hhhhccceeecccccccc
Confidence 111 111 246666666666655543 344555555555555443
No 16
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.77 E-value=6.5e-16 Score=150.29 Aligned_cols=179 Identities=21% Similarity=0.218 Sum_probs=122.9
Q ss_pred CCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEEC
Q psy8551 139 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVL 218 (581)
Q Consensus 139 ~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l 218 (581)
.+++.|++++++++.+|. .+++|++|++++|.++.++. ...+|+.|++.+|+++.+.. + .+.|++|++
T Consensus 38 ~~l~~LdLs~~~L~~lp~----~~~~L~~L~Ls~N~l~~lp~----~~~~L~~L~l~~n~l~~l~~--l--p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPE----LPPHLESLVASCNSLTELPE----LPQSLKSLLVDNNNLKALSD--L--PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCSCCCS----CCTTCSEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCCCS--C--CTTCCEEEC
T ss_pred cCCCEEEeCCCCCCCCCC----CCCCCCEEECCCCCCccccc----chhhhhhhhhhhcccchhhh--h--ccccccccc
Confidence 468899999999998875 25789999999999987764 24689999999998876542 2 246999999
Q ss_pred CCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCcc
Q psy8551 219 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLK 298 (581)
Q Consensus 219 ~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 298 (581)
++|.++.++. ++.+++|++++++++.+...+.. ...+..+.+..... .....+..+..++.+.+..+ ...
T Consensus 106 ~~n~l~~lp~--~~~l~~L~~L~l~~~~~~~~~~~----~~~l~~l~~~~~~~---~~~~~l~~l~~l~~L~l~~n-~~~ 175 (353)
T d1jl5a_ 106 SNNQLEKLPE--LQNSSFLKIIDVDNNSLKKLPDL----PPSLEFIAAGNNQL---EELPELQNLPFLTAIYADNN-SLK 175 (353)
T ss_dssp CSSCCSSCCC--CTTCTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCC---SSCCCCTTCTTCCEEECCSS-CCS
T ss_pred cccccccccc--hhhhccceeeccccccccccccc----cccccchhhccccc---cccccccccccceecccccc-ccc
Confidence 9999998873 67789999999998877654432 34455565544321 22334556677888888877 333
Q ss_pred ccccccccCCCCCcEEecCCCCCccccccccCCCCcceEEccCCCC
Q psy8551 299 TIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 344 (581)
Q Consensus 299 ~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~ 344 (581)
.++. .....+.+...+..+..++. ...++.++.+++++|..
T Consensus 176 ~~~~----~~~~~~~l~~~~~~~~~~~~-~~~l~~L~~l~l~~n~~ 216 (353)
T d1jl5a_ 176 KLPD----LPLSLESIVAGNNILEELPE-LQNLPFLTTIYADNNLL 216 (353)
T ss_dssp SCCC----CCTTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSSCC
T ss_pred cccc----cccccccccccccccccccc-ccccccccccccccccc
Confidence 3322 12234455565555554443 45667888888877654
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.1e-17 Score=153.78 Aligned_cols=197 Identities=22% Similarity=0.279 Sum_probs=130.5
Q ss_pred ccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCccc
Q psy8551 47 IQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR 126 (581)
Q Consensus 47 l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~ 126 (581)
-+.++.++..++.+|+.+. +++++|++++|.|+.++..+|.++++|++|++++|.+
T Consensus 10 ~~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~---------------------- 65 (242)
T d1xwdc1 10 NRVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV---------------------- 65 (242)
T ss_dssp SSEEEEESCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTT----------------------
T ss_pred CCEEEEeCCCCCCcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccc----------------------
Confidence 3578889999999987553 6899999999999999988899999999999999864
Q ss_pred ccccchhhcCCCCCCcEEeCCC-CcCcccCCcccccCccCcEEECCCCcceeccCC-cCCCCCCCcEEEcCCCCccccCc
Q psy8551 127 ISRIDQACFEGLTALRILYLDD-NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG-AFNGLGRLSALDLRGAGLTNISD 204 (581)
Q Consensus 127 l~~~~~~~l~~~~~L~~L~l~~-~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~-~l~~l~~L~~L~L~~~~l~~~~~ 204 (581)
...+++.+|.+++.++++.+.. +++...+...|..+++|+++++.++.+...... .+..++.+..+...++.+..+..
T Consensus 66 ~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~ 145 (242)
T d1xwdc1 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIER 145 (242)
T ss_dssp CCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECT
T ss_pred cceeeccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccc
Confidence 2234455677788888888754 567777776788888888888888877655432 23344555555555556666555
Q ss_pred cccCCCC-CCcEEECCCCcCCccCccccCCCCCCCEE-ECCCCcccccCCcccCCCcccceeeecC
Q psy8551 205 NAFRGLS-GLRSLVLTDNRLQSIPTKQLSKLTRLEEL-EIGQNGFSMLEAGCFKGLSYLKRLEITG 268 (581)
Q Consensus 205 ~~l~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L-~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 268 (581)
..+..++ .++.|++.+|+++.++...+. .++++++ .+.+|.++.++...|.++++|+.|++++
T Consensus 146 ~~~~~~~~~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~ 210 (242)
T d1xwdc1 146 NSFVGLSFESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISR 210 (242)
T ss_dssp TSSTTSBSSCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTT
T ss_pred cccccccccceeeeccccccccccccccc-chhhhccccccccccccccHHHhcCCCCCCEEECCC
Confidence 5555443 566666666666666544332 2333333 3444555555444444444444444444
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=8.2e-17 Score=145.95 Aligned_cols=185 Identities=23% Similarity=0.343 Sum_probs=106.7
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCc
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ 124 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~ 124 (581)
.++++|++.++.|++++ .+.++++|++|++++|.++.+.+ +..+++|+++++++|.+
T Consensus 41 ~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~-------------------- 97 (227)
T d1h6ua2 41 DGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL-------------------- 97 (227)
T ss_dssp HTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCC--------------------
T ss_pred CCcCEEECCCCCCCcch-hHhcCCCCcEeecCCceeecccc--ccccccccccccccccc--------------------
Confidence 45666666666666663 35666666666666666655542 56666666666666542
Q ss_pred ccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCc
Q psy8551 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204 (581)
Q Consensus 125 ~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~ 204 (581)
+.+. .+.++++|+.++++++...... .+...+.++.+.++++.+....+ +.++++|+.|++.+|.++...
T Consensus 98 ---~~i~--~l~~l~~L~~l~l~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~L~~L~l~~n~~~~~~- 167 (227)
T d1h6ua2 98 ---KNVS--AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLT- 167 (227)
T ss_dssp ---SCCG--GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG-
T ss_pred ---cccc--cccccccccccccccccccccc--hhccccchhhhhchhhhhchhhh--hccccccccccccccccccch-
Confidence 2221 2455666666666666554433 24445566666666655543332 455566666666666555433
Q ss_pred cccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeec
Q psy8551 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 267 (581)
Q Consensus 205 ~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 267 (581)
.+..+++|+.|++++|+++++++ ++.+++|++|++++|+++.+++ +..+++|+.|+++
T Consensus 168 -~l~~l~~L~~L~Ls~n~l~~l~~--l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 168 -PLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp -GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred -hhcccccceecccCCCccCCChh--hcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 25566666666666666665542 5566666666666666665442 4555666665553
No 19
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=2.1e-16 Score=139.78 Aligned_cols=161 Identities=24% Similarity=0.371 Sum_probs=82.7
Q ss_pred CCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCcccccccchhhcCCCCCCcEEe
Q psy8551 66 IYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145 (581)
Q Consensus 66 ~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l~~~~~~~l~~~~~L~~L~ 145 (581)
.+.++++|+++++.++.+. .+..+++|++|++++|.+ +++.+ ++++++|++|+
T Consensus 38 ~l~~l~~L~l~~~~i~~l~--~l~~l~nL~~L~Ls~N~l-----------------------~~~~~--l~~l~~L~~L~ 90 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQL-----------------------TDITP--LKNLTKLVDIL 90 (199)
T ss_dssp HHTTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCC-----------------------CCCGG--GTTCTTCCEEE
T ss_pred HhcCCCEEECCCCCCCCcc--ccccCCCcCcCccccccc-----------------------cCccc--ccCCccccccc
Confidence 3445555555555555443 244555555555555532 22221 44555555555
Q ss_pred CCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCc
Q psy8551 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 225 (581)
Q Consensus 146 l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~ 225 (581)
+++|.+..++ .+.++++|+.|+++++...... .+..+++|+.|++++|++..+. .+..+++|+.|++.+|++++
T Consensus 91 l~~n~~~~~~--~l~~l~~L~~L~l~~~~~~~~~--~~~~l~~L~~L~l~~n~l~~~~--~l~~~~~L~~L~l~~n~l~~ 164 (199)
T d2omxa2 91 MNNNQIADIT--PLANLTNLTGLTLFNNQITDID--PLKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLNFSSNQVTD 164 (199)
T ss_dssp CCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCC
T ss_pred cccccccccc--cccccccccccccccccccccc--ccchhhhhHHhhhhhhhhcccc--cccccccccccccccccccC
Confidence 5555554443 2445555555555555544332 2445555666666655554432 34555566666666666655
Q ss_pred cCccccCCCCCCCEEECCCCcccccCCcccCCCcccce
Q psy8551 226 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263 (581)
Q Consensus 226 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~ 263 (581)
++ .++.+++|++|++++|+++.++ .+..+++|+.
T Consensus 165 l~--~l~~l~~L~~L~ls~N~i~~i~--~l~~L~~L~~ 198 (199)
T d2omxa2 165 LK--PLANLTTLERLDISSNKVSDIS--VLAKLTNLES 198 (199)
T ss_dssp CG--GGTTCTTCCEEECCSSCCCCCG--GGGGCTTCSE
T ss_pred Cc--cccCCCCCCEEECCCCCCCCCc--cccCCCCCCc
Confidence 54 2555666666666666555432 2444454444
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.7e-16 Score=141.64 Aligned_cols=122 Identities=30% Similarity=0.449 Sum_probs=61.1
Q ss_pred CCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcE
Q psy8551 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRS 215 (581)
Q Consensus 136 ~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~ 215 (581)
+.+++|+.|++++|+++.++ .+..+++|+.|++++|.+..+. .+.++++++.++++++.++... .+..+++|+.
T Consensus 87 ~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~~~~~~~~--~l~~l~~l~~l~~~~n~l~~~~--~~~~l~~L~~ 160 (210)
T d1h6ta2 87 ANLKNLGWLFLDENKVKDLS--SLKDLKKLKSLSLEHNGISDIN--GLVHLPQLESLYLGNNKITDIT--VLSRLTKLDT 160 (210)
T ss_dssp TTCTTCCEEECCSSCCCCGG--GGTTCTTCCEEECTTSCCCCCG--GGGGCTTCCEEECCSSCCCCCG--GGGGCTTCSE
T ss_pred ccCccccccccccccccccc--cccccccccccccccccccccc--cccccccccccccccccccccc--cccccccccc
Confidence 34455555555555554443 2444555555555555444332 2444555555555555544322 2344555555
Q ss_pred EECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeec
Q psy8551 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 267 (581)
Q Consensus 216 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 267 (581)
+++++|+++++++ +..+++|++|++++|.++.++ .+..+++|+.|+++
T Consensus 161 l~l~~n~l~~i~~--l~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 161 LSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELF 208 (210)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEE
T ss_pred ccccccccccccc--ccCCCCCCEEECCCCCCCCCh--hhcCCCCCCEEEcc
Confidence 5555555555432 555555556666555555442 24555555555554
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=4.3e-16 Score=137.73 Aligned_cols=160 Identities=26% Similarity=0.395 Sum_probs=129.6
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCc
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ 124 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~ 124 (581)
+++++|+++++.|+.++ .+..+++|++|++++|+++.+++ +.++++|++|++++|.+
T Consensus 40 ~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~-------------------- 96 (199)
T d2omxa2 40 DQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQI-------------------- 96 (199)
T ss_dssp TTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC--------------------
T ss_pred cCCCEEECCCCCCCCcc-ccccCCCcCcCccccccccCccc--ccCCccccccccccccc--------------------
Confidence 68899999999998875 47889999999999999888774 78889999999998763
Q ss_pred ccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCc
Q psy8551 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204 (581)
Q Consensus 125 ~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~ 204 (581)
..++ .+++++.|+.|+++++.+.... .+..+++|+.|++++|.+..++ .+..+++|+.|++.+|+++++.
T Consensus 97 ---~~~~--~l~~l~~L~~L~l~~~~~~~~~--~~~~l~~L~~L~l~~n~l~~~~--~l~~~~~L~~L~l~~n~l~~l~- 166 (199)
T d2omxa2 97 ---ADIT--PLANLTNLTGLTLFNNQITDID--PLKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLNFSSNQVTDLK- 166 (199)
T ss_dssp ---CCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG-
T ss_pred ---cccc--cccccccccccccccccccccc--ccchhhhhHHhhhhhhhhcccc--cccccccccccccccccccCCc-
Confidence 2222 2678899999999988777654 4677889999999999887654 3778899999999999888765
Q ss_pred cccCCCCCCcEEECCCCcCCccCccccCCCCCCCEE
Q psy8551 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240 (581)
Q Consensus 205 ~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 240 (581)
.+.++++|++|++++|++++++ .+..+++|++|
T Consensus 167 -~l~~l~~L~~L~ls~N~i~~i~--~l~~L~~L~~L 199 (199)
T d2omxa2 167 -PLANLTTLERLDISSNKVSDIS--VLAKLTNLESL 199 (199)
T ss_dssp -GGTTCTTCCEEECCSSCCCCCG--GGGGCTTCSEE
T ss_pred -cccCCCCCCEEECCCCCCCCCc--cccCCCCCCcC
Confidence 3788899999999999988875 37778888775
No 22
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=7.6e-16 Score=139.43 Aligned_cols=202 Identities=26% Similarity=0.406 Sum_probs=163.3
Q ss_pred ccCcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCcc
Q psy8551 121 IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200 (581)
Q Consensus 121 ~l~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~ 200 (581)
+++.+.+++.. .++.+.+|+.|++.+++++++. .+.++++|++|++++|.+.++.+ +..+++|+.+++.++.++
T Consensus 25 ~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~ 98 (227)
T d1h6ua2 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK 98 (227)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS
T ss_pred HhCCCCcCCcC--CHHHcCCcCEEECCCCCCCcch--hHhcCCCCcEeecCCceeecccc--cccccccccccccccccc
Confidence 44444555543 2456789999999999999874 58899999999999999987764 889999999999999888
Q ss_pred ccCccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccC
Q psy8551 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280 (581)
Q Consensus 201 ~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 280 (581)
.+. .+..+++|+.+.++++....+. .+...+.++.+.++.+.+..... +..+++|+.+.+.++. +... ..+
T Consensus 99 ~i~--~l~~l~~L~~l~l~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~L~~L~l~~n~-~~~~--~~l 169 (227)
T d1h6ua2 99 NVS--AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQ-VSDL--TPL 169 (227)
T ss_dssp CCG--GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC-CCCC--GGG
T ss_pred ccc--cccccccccccccccccccccc--hhccccchhhhhchhhhhchhhh--hccccccccccccccc-cccc--hhh
Confidence 654 4788999999999999887765 36677899999999887765443 5677889999998863 3322 337
Q ss_pred CCCCCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCccccccccCCCCcceEEccC
Q psy8551 281 ADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 341 (581)
Q Consensus 281 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~ 341 (581)
..+++|++|++++| .+.+++. ++++++|++|++++|+++++++ +..+++|++|++++
T Consensus 170 ~~l~~L~~L~Ls~n-~l~~l~~--l~~l~~L~~L~Ls~N~lt~i~~-l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 170 ANLSKLTTLKADDN-KISDISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTN 226 (227)
T ss_dssp TTCTTCCEEECCSS-CCCCCGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEE
T ss_pred cccccceecccCCC-ccCCChh--hcCCCCCCEEECcCCcCCCCcc-cccCCCCCEEEeeC
Confidence 78899999999999 6777764 7899999999999999998874 77899999999874
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66 E-value=6.2e-16 Score=137.88 Aligned_cols=164 Identities=24% Similarity=0.372 Sum_probs=132.8
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCc
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ 124 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~ 124 (581)
.++++|+++++.++.++. +.++++|++|++++|+++.++. +..+++|++|++++|.+
T Consensus 46 ~~L~~L~l~~~~i~~l~~-l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i-------------------- 102 (210)
T d1h6ta2 46 NSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKV-------------------- 102 (210)
T ss_dssp HTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC--------------------
T ss_pred cCccEEECcCCCCCCchh-HhhCCCCCEEeCCCccccCccc--cccCccccccccccccc--------------------
Confidence 578889999998888764 7788899999999998888773 67788899999988753
Q ss_pred ccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCc
Q psy8551 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204 (581)
Q Consensus 125 ~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~ 204 (581)
+.++ .+.++++|+.|+++++.+..++ .+..+++++.+++++|.+++.. .+..+++|+.+++++|+++++.+
T Consensus 103 ---~~l~--~l~~l~~L~~L~l~~~~~~~~~--~l~~l~~l~~l~~~~n~l~~~~--~~~~l~~L~~l~l~~n~l~~i~~ 173 (210)
T d1h6ta2 103 ---KDLS--SLKDLKKLKSLSLEHNGISDIN--GLVHLPQLESLYLGNNKITDIT--VLSRLTKLDTLSLEDNQISDIVP 173 (210)
T ss_dssp ---CCGG--GGTTCTTCCEEECTTSCCCCCG--GGGGCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG
T ss_pred ---cccc--cccccccccccccccccccccc--cccccccccccccccccccccc--ccccccccccccccccccccccc
Confidence 3332 3778899999999998887654 5778889999999999887654 36678899999999998887653
Q ss_pred cccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCC
Q psy8551 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244 (581)
Q Consensus 205 ~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 244 (581)
+..+++|+.|++++|++++++ .+..+++|++|++++
T Consensus 174 --l~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 174 --LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFS 209 (210)
T ss_dssp --GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEE
T ss_pred --ccCCCCCCEEECCCCCCCCCh--hhcCCCCCCEEEccC
Confidence 788899999999999998875 488899999998853
No 24
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=8.4e-19 Score=177.73 Aligned_cols=113 Identities=18% Similarity=0.178 Sum_probs=62.6
Q ss_pred cCccEEEcccCCcccc--cccccCCCcccEEEcCCCceeecC----CCCCCCCCcccEEeCCCCCCCCcccccccCCccc
Q psy8551 45 PSIQRLVLSTNRIKTV--DSAIPIYLSLQHVDLSHTTWLIIP----IGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRR 118 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l--~~~~~~~~~L~~L~ls~~~l~~~~----~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~ 118 (581)
++|++||++++++++. ...+..++++++|+|++|.++... ..++..+++|++|++++|.+.+..+
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~--------- 72 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGV--------- 72 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHH---------
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHH---------
Confidence 3678888888888753 344566778888888888766321 1234566777777777765311100
Q ss_pred ccccCcccccccchhhcC-CCCCCcEEeCCCCcCcccCC----cccccCccCcEEECCCCcce
Q psy8551 119 VEIFGQNRISRIDQACFE-GLTALRILYLDDNQLRSVPT----PSFIYLGMLAELRVGLNVFT 176 (581)
Q Consensus 119 L~~l~~~~l~~~~~~~l~-~~~~L~~L~l~~~~i~~~~~----~~~~~~~~L~~L~L~~n~~~ 176 (581)
..+ ...+. ...+|++|++++|.+++... ..+..+++|++|++++|.+.
T Consensus 73 ---------~~l-~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 73 ---------HCV-LQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp ---------HHH-HHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred ---------HHH-HHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 000 11111 22456677777666654321 12344555666666665544
No 25
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=5.5e-17 Score=164.13 Aligned_cols=136 Identities=18% Similarity=0.161 Sum_probs=85.0
Q ss_pred CCCCCEEEcCCCcCCccChhhh-----cCCCCCcEeecCCCcceeeccc----cccCCccccEEeecCCCCeeEecC---
Q psy8551 404 LSGLRSLVLTDNRLQSIPTKQL-----SKLTRLEELEIGQNGFSMLEAG----CFKGLSYLKRLEITGASNLTRVRK--- 471 (581)
Q Consensus 404 ~~~L~~L~l~~n~l~~~~~~~l-----~~l~~L~~L~l~~~~i~~~~~~----~~~~~~~L~~L~l~~~~~l~~~~~--- 471 (581)
.+.++.+++++|.++......+ ...+.|+.++++++.++..... .+...++|++|++++| .+++.+.
T Consensus 282 ~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N-~i~~~g~~~l 360 (460)
T d1z7xw1 282 KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNN-RLEDAGVREL 360 (460)
T ss_dssp CTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSS-BCHHHHHHHH
T ss_pred cccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeee-cccCcccchh
Confidence 5677788888877754322211 2345788888888777654322 2345567888888775 3433211
Q ss_pred -Ccc-CCCCCCCeeeCCCCCCceeec----CCccCCCCCccEEEcCCCccee-----ecccccc-CCcceEEecCCCccc
Q psy8551 472 -GAF-ADNLNLETLTLNKNPKLKIIE----EDALVGLPNLYHLNLKENAFTS-----FSESMLA-WPELRTIDIAENPIE 539 (581)
Q Consensus 472 -~~~-~~~~~L~~L~l~~~~~l~~~~----~~~~~~l~~L~~L~l~~n~l~~-----l~~~~~~-~~~L~~L~l~~np~~ 539 (581)
..+ ...+.|++|++++| .++... ...+..+++|++|+|++|+++. +.+.+.. ...|+.|++.+|.+.
T Consensus 361 ~~~l~~~~~~L~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 361 CQGLGQPGSVLRVLWLADC-DVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp HHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred hhhhhcccCCCCEEECCCC-CCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCC
Confidence 112 34567889999988 555421 1235567889999999998873 3333433 336899999999886
Q ss_pred cc
Q psy8551 540 CG 541 (581)
Q Consensus 540 c~ 541 (581)
.+
T Consensus 440 ~~ 441 (460)
T d1z7xw1 440 EE 441 (460)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.3e-14 Score=122.56 Aligned_cols=108 Identities=23% Similarity=0.250 Sum_probs=58.5
Q ss_pred cCccEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCc
Q psy8551 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ 124 (581)
Q Consensus 45 ~~l~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~ 124 (581)
..+++|+|++|+|+.++..+..+++|++|++++|.|+.++ .+..+++|++|++++|.
T Consensus 18 ~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~--~~~~l~~L~~L~ls~N~--------------------- 74 (162)
T d1a9na_ 18 VRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLD--GFPLLRRLKTLLVNNNR--------------------- 74 (162)
T ss_dssp TSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEEC--CCCCCSSCCEEECCSSC---------------------
T ss_pred CcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccC--CcccCcchhhhhccccc---------------------
Confidence 3566666666666666555555666666666666666553 35555666666666654
Q ss_pred ccccccchhhcCCCCCCcEEeCCCCcCcccCC-cccccCccCcEEECCCCccee
Q psy8551 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPT-PSFIYLGMLAELRVGLNVFTT 177 (581)
Q Consensus 125 ~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~-~~~~~~~~L~~L~L~~n~~~~ 177 (581)
++.+++..+..+++|+.|++++|.+..++. ..+..+++|++|++++|.++.
T Consensus 75 --i~~l~~~~~~~l~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 75 --ICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp --CCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred --ccCCCccccccccccccceeccccccccccccccccccccchhhcCCCcccc
Confidence 223333333445555555555555554432 234445555555555554443
No 27
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.2e-14 Score=135.87 Aligned_cols=183 Identities=13% Similarity=0.106 Sum_probs=97.8
Q ss_pred CCCCEEeCCCCCCccccccccccCCCCCcEEecCCCCCc-cccccccCCCCcceEEccCCCCccCCchhhHHHHHhhcCC
Q psy8551 284 LNLETLTLNKNPKLKTIEEGALVGLPNLYHLNLKENAFT-SFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNT 362 (581)
Q Consensus 284 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~~~ 362 (581)
.+|++|+++++..........+.++++|++|+++++.++ ..+..+..+++|++|+++++.--.+.. +
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~---l--------- 113 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFA---L--------- 113 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHH---H---------
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccc---c---------
Confidence 456666666652222222224566677777777777655 233445566677777776642110000 0
Q ss_pred CceeecCCCcccccccccCCccccccCCCCccccCccccCCCCCCCEEEcCCC-cCCccCh-hhh-cCCCCCcEeecCCC
Q psy8551 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN-RLQSIPT-KQL-SKLTRLEELEIGQN 439 (581)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~L~~L~l~~n-~l~~~~~-~~l-~~l~~L~~L~l~~~ 439 (581)
...+.++++|++|++++| .+++... ..+ ..++.|+.|+++++
T Consensus 114 -----------------------------------~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~ 158 (284)
T d2astb2 114 -----------------------------------QTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 158 (284)
T ss_dssp -----------------------------------HHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred -----------------------------------chhhHHHHhccccccccccccccccchhhhcccccccchhhhccc
Confidence 001223566777777665 3332111 112 23456777777654
Q ss_pred --cceeecc-ccccCCccccEEeecCCCCeeEecCCccCCCCCCCeeeCCCCCCceeecCCccCCCCCccEEEcCCC
Q psy8551 440 --GFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKIIEEDALVGLPNLYHLNLKEN 513 (581)
Q Consensus 440 --~i~~~~~-~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~l~~L~~L~l~~n 513 (581)
.++.... .....+++|++|++++|..+++.....+..+++|++|++++|..+++.....++++++|++|++++|
T Consensus 159 ~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 159 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 2332211 1224566677777776666665555556666677777777765555444444566677777777666
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=4.2e-14 Score=119.45 Aligned_cols=128 Identities=20% Similarity=0.213 Sum_probs=108.0
Q ss_pred cCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCc
Q psy8551 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLR 214 (581)
Q Consensus 135 l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~ 214 (581)
+.++.+++.|++++|+|+.++. .+..+++|++|++++|.++.+. .+..+++|+.|++++|+++.+++..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~-~~~~l~~L~~L~Ls~N~i~~l~--~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLD--GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEEC--CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCCccCc-cccccccCCEEECCCCCCCccC--CcccCcchhhhhcccccccCCCccccccccccc
Confidence 6678899999999999999974 5677899999999999999884 488999999999999999998877777899999
Q ss_pred EEECCCCcCCccCc-cccCCCCCCCEEECCCCcccccCC---cccCCCcccceee
Q psy8551 215 SLVLTDNRLQSIPT-KQLSKLTRLEELEIGQNGFSMLEA---GCFKGLSYLKRLE 265 (581)
Q Consensus 215 ~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~---~~~~~~~~L~~L~ 265 (581)
+|++++|+++.++. ..+..+++|+++++++|+++..+. ..+..+++|+.|+
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 99999999987753 468889999999999998876653 2345566666665
No 29
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.44 E-value=1.1e-13 Score=110.86 Aligned_cols=104 Identities=22% Similarity=0.263 Sum_probs=81.5
Q ss_pred cEEEcccCCcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCcccccccCcccc
Q psy8551 48 QRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRI 127 (581)
Q Consensus 48 ~~L~L~~~~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l~~~~l 127 (581)
|+|+|++|+++.++. +..+++|++|++++|+++.+|. .+..+++|++|++++|.+
T Consensus 1 R~L~Ls~n~l~~l~~-l~~l~~L~~L~ls~N~l~~lp~-~~~~l~~L~~L~l~~N~i----------------------- 55 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNAL----------------------- 55 (124)
T ss_dssp SEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCCCCCG-GGGGCTTCCEEECCSSCC-----------------------
T ss_pred CEEEcCCCCCCCCcc-cccCCCCCEEECCCCccCcchh-hhhhhhcccccccccccc-----------------------
Confidence 578999999988874 7888999999999999988874 578888899999988863
Q ss_pred cccchhhcCCCCCCcEEeCCCCcCcccCC-cccccCccCcEEECCCCcceec
Q psy8551 128 SRIDQACFEGLTALRILYLDDNQLRSVPT-PSFIYLGMLAELRVGLNVFTTL 178 (581)
Q Consensus 128 ~~~~~~~l~~~~~L~~L~l~~~~i~~~~~-~~~~~~~~L~~L~L~~n~~~~~ 178 (581)
+.++ .++.+++|++|++++|+++.++. ..+..+++|++|++++|.++..
T Consensus 56 ~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 56 ENVD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp CCCG--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred cccC--ccccccccCeEECCCCccCCCCCchhhcCCCCCCEEECCCCcCCcC
Confidence 3332 26778888888888888887764 3567778888888888877644
No 30
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=4.4e-14 Score=132.01 Aligned_cols=58 Identities=22% Similarity=0.248 Sum_probs=25.7
Q ss_pred CCCcEEEcCCCCccccC-ccccCCCCCCcEEECCCCcCCccCccccCCCCCCCEEECCC
Q psy8551 187 GRLSALDLRGAGLTNIS-DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244 (581)
Q Consensus 187 ~~L~~L~L~~~~l~~~~-~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 244 (581)
.+|++|+++++.++... ...+..+++|++|++.++.++......+..+++|++|++++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~ 104 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 104 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccc
Confidence 45555555555443221 12234445555555555544432223344444444444444
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.38 E-value=8.5e-13 Score=105.65 Aligned_cols=105 Identities=27% Similarity=0.352 Sum_probs=82.5
Q ss_pred cEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCC
Q psy8551 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221 (581)
Q Consensus 142 ~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n 221 (581)
|.|++++|+++.++ .+..+++|++|++++|.++.+++ .+..+++|+.|++++|.++.++ .+..+++|+.|++++|
T Consensus 1 R~L~Ls~n~l~~l~--~l~~l~~L~~L~ls~N~l~~lp~-~~~~l~~L~~L~l~~N~i~~l~--~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTVLC--HLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVD--GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSSCC--CGGGGTTCCEEECCSSCCCCCCG-GGGGCTTCCEEECCSSCCCCCG--GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCCCc--ccccCCCCCEEECCCCccCcchh-hhhhhhcccccccccccccccC--ccccccccCeEECCCC
Confidence 56888888888775 37778888888888888887754 4778888888888888888764 4778888888888888
Q ss_pred cCCccCc-cccCCCCCCCEEECCCCcccccC
Q psy8551 222 RLQSIPT-KQLSKLTRLEELEIGQNGFSMLE 251 (581)
Q Consensus 222 ~l~~~~~-~~~~~l~~L~~L~l~~~~~~~~~ 251 (581)
+++.++. ..+..+++|+++++++|+++...
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~ 106 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcCc
Confidence 8887653 45777888888888888876543
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=2.6e-11 Score=101.27 Aligned_cols=123 Identities=24% Similarity=0.305 Sum_probs=99.1
Q ss_pred CCCEEECCCCcccccCCcccCCCcccceeeecCCCCceeecCccCCCCCCCCEEeCCCCCCccccccccccCCCCCcEEe
Q psy8551 236 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGALVGLPNLYHLN 315 (581)
Q Consensus 236 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~ 315 (581)
....++.+++.+...+.. +..+++++.|.+.+++.++.+....|.++++|+.|++++| .+..++..+|..+++|+.|+
T Consensus 9 ~~~~l~c~~~~~~~~p~~-l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 9 GSSGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS-GLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSS-CCCEECTTGGGSCSCCCEEE
T ss_pred CCCeEEecCCCCccCccc-ccCccccCeeecCCCccccccCchhhccccccCcceeecc-ccCCccccccccccccccee
Confidence 344566666555544333 5566777777777666777888778888889999999999 78899888899999999999
Q ss_pred cCCCCCccccccccCCCCcceEEccCCCCccCCchhhHHHHHhhc
Q psy8551 316 LKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRR 360 (581)
Q Consensus 316 l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~ 360 (581)
+++|.++.++........|+.|++++|++.|.|...|+..+....
T Consensus 87 Ls~N~l~~l~~~~~~~~~l~~L~L~~Np~~C~C~~~~l~~~~~~~ 131 (156)
T d2ifga3 87 LSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEG 131 (156)
T ss_dssp CCSSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHHHHHTT
T ss_pred ccCCCCcccChhhhccccccccccCCCcccCCchHHHHHHHHHhc
Confidence 999999999987777778999999999999999999998876543
No 33
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.22 E-value=2.5e-12 Score=123.86 Aligned_cols=149 Identities=22% Similarity=0.206 Sum_probs=97.8
Q ss_pred CCCCCEEEcCCCcCCccCh----hhhcCCCCCcEeecCCCcceee-----ccccccCCccccEEeecCCCCeeEe----c
Q psy8551 404 LSGLRSLVLTDNRLQSIPT----KQLSKLTRLEELEIGQNGFSML-----EAGCFKGLSYLKRLEITGASNLTRV----R 470 (581)
Q Consensus 404 ~~~L~~L~l~~n~l~~~~~----~~l~~l~~L~~L~l~~~~i~~~-----~~~~~~~~~~L~~L~l~~~~~l~~~----~ 470 (581)
.+.|+.+.+++|.++.... ..+..++.|++|++++|.+... ....+..+++|++|++++|. ++.. .
T Consensus 157 ~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~-i~~~g~~~L 235 (344)
T d2ca6a1 157 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT-FTHLGSSAL 235 (344)
T ss_dssp CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSC-CHHHHHHHH
T ss_pred Ccccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccc-ccccccccc
Confidence 4667777777777653322 3345677788888888777642 23345667778888887753 3322 1
Q ss_pred CCccCCCCCCCeeeCCCCCCceeecCC----ccC--CCCCccEEEcCCCccee-----eccccc-cCCcceEEecCCCcc
Q psy8551 471 KGAFADNLNLETLTLNKNPKLKIIEED----ALV--GLPNLYHLNLKENAFTS-----FSESML-AWPELRTIDIAENPI 538 (581)
Q Consensus 471 ~~~~~~~~~L~~L~l~~~~~l~~~~~~----~~~--~l~~L~~L~l~~n~l~~-----l~~~~~-~~~~L~~L~l~~np~ 538 (581)
...+..+++|++|++++| .++..... .+. ..+.|++|++++|.++. +...+. .+++|+.|+++||++
T Consensus 236 ~~~l~~~~~L~~L~Ls~n-~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~ 314 (344)
T d2ca6a1 236 AIALKSWPNLRELGLNDC-LLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 314 (344)
T ss_dssp HHHGGGCTTCCEEECTTC-CCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred cccccccccchhhhhhcC-ccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcC
Confidence 234567888999999999 55543221 122 34689999999999873 445554 578999999999999
Q ss_pred cccCc-hhHHHHHHhhc
Q psy8551 539 ECGCN-ILWLREMLVRR 554 (581)
Q Consensus 539 ~c~c~-~~~~~~~~~~~ 554 (581)
..+.. ..++.+.....
T Consensus 315 ~~~~~~~~~l~~~~~~~ 331 (344)
T d2ca6a1 315 SEEDDVVDEIREVFSTR 331 (344)
T ss_dssp CTTSHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHc
Confidence 76554 44565555443
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.22 E-value=1.3e-12 Score=125.97 Aligned_cols=251 Identities=17% Similarity=0.112 Sum_probs=148.4
Q ss_pred cccccccCCCcccEEEcCCCceeecC----CCCCCCCCcccEEeCCCCCCC--CcccccccCCcccccccCcccccccch
Q psy8551 59 TVDSAIPIYLSLQHVDLSHTTWLIIP----IGGFEPQEKLVELQLNHNKHF--PQQIVCSIISPRRVEIFGQNRISRIDQ 132 (581)
Q Consensus 59 ~l~~~~~~~~~L~~L~ls~~~l~~~~----~~~~~~l~~L~~L~l~~n~~~--~~~~~~~~~~~~~L~~l~~~~l~~~~~ 132 (581)
.+...+.....|+.|+|++|.+.... ...+...++|+.++++++... ...... .+. ...
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~--------------~~~-~l~ 86 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPE--------------ALR-LLL 86 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHH--------------HHH-HHH
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccch--------------HHH-HHH
Confidence 34445667788888888888775311 234667788888888876531 100000 011 113
Q ss_pred hhcCCCCCCcEEeCCCCcCcccCCc----ccccCccCcEEECCCCcceeccCC-------------cCCCCCCCcEEEcC
Q psy8551 133 ACFEGLTALRILYLDDNQLRSVPTP----SFIYLGMLAELRVGLNVFTTLADG-------------AFNGLGRLSALDLR 195 (581)
Q Consensus 133 ~~l~~~~~L~~L~l~~~~i~~~~~~----~~~~~~~L~~L~L~~n~~~~~~~~-------------~l~~l~~L~~L~L~ 195 (581)
..+..+++|+.|++++|.+...... .+..+++|++|++++|.+...... .....+.|+.+.++
T Consensus 87 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~ 166 (344)
T d2ca6a1 87 QALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG 166 (344)
T ss_dssp HHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECC
T ss_pred HHHhhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecc
Confidence 3466778899999998887764332 234567888888888876421100 01245677788887
Q ss_pred CCCccccCcc----ccCCCCCCcEEECCCCcCCcc-----CccccCCCCCCCEEECCCCcccccCCcccCCCcccceeee
Q psy8551 196 GAGLTNISDN----AFRGLSGLRSLVLTDNRLQSI-----PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266 (581)
Q Consensus 196 ~~~l~~~~~~----~l~~~~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l 266 (581)
++.++..... .+..+++|+.|++++|+++.. ....+..+++|++|++++|.++......+
T Consensus 167 ~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L----------- 235 (344)
T d2ca6a1 167 RNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL----------- 235 (344)
T ss_dssp SSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHH-----------
T ss_pred cccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccc-----------
Confidence 7766543322 234567788888887777631 12345566777777777776543211111
Q ss_pred cCCCCceeecCccCCCCCCCCEEeCCCCCCcccccccc----cc--CCCCCcEEecCCCCCcc-----cccccc-CCCCc
Q psy8551 267 TGASNLTRVRKGAFADNLNLETLTLNKNPKLKTIEEGA----LV--GLPNLYHLNLKENAFTS-----FSESML-AWPEL 334 (581)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~----~~--~~~~L~~L~l~~~~l~~-----~~~~~~-~~~~L 334 (581)
...+..+++|++|++++| .+++..... +. ..+.|++|++++|.++. +...+. +.+.|
T Consensus 236 ----------~~~l~~~~~L~~L~Ls~n-~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L 304 (344)
T d2ca6a1 236 ----------AIALKSWPNLRELGLNDC-LLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDL 304 (344)
T ss_dssp ----------HHHGGGCTTCCEEECTTC-CCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTC
T ss_pred ----------cccccccccchhhhhhcC-ccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCC
Confidence 012233456666777766 344332211 22 23578899999988762 333332 46789
Q ss_pred ceEEccCCCCcc
Q psy8551 335 RTIDIAENPIEC 346 (581)
Q Consensus 335 ~~L~l~~~~~~~ 346 (581)
+.|++++|.+..
T Consensus 305 ~~L~l~~N~~~~ 316 (344)
T d2ca6a1 305 LFLELNGNRFSE 316 (344)
T ss_dssp CEEECTTSBSCT
T ss_pred CEEECCCCcCCC
Confidence 999999998864
No 35
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.19 E-value=1.1e-13 Score=121.26 Aligned_cols=129 Identities=23% Similarity=0.259 Sum_probs=89.3
Q ss_pred cCccEEEcccC--CcccccccccCCCcccEEEcCCCceeecCCCCCCCCCcccEEeCCCCCCCCcccccccCCccccccc
Q psy8551 45 PSIQRLVLSTN--RIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF 122 (581)
Q Consensus 45 ~~l~~L~L~~~--~i~~l~~~~~~~~~L~~L~ls~~~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~l 122 (581)
...+.+++.+. .++.++..+..+++|++|+|++|+|+.++ .+..+++|++|++++|.+
T Consensus 23 ~~~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~i~--~l~~l~~L~~L~Ls~N~i------------------ 82 (198)
T d1m9la_ 23 TEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLI------------------ 82 (198)
T ss_dssp TTCSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEESCCC--CHHHHTTCCEEECCEEEE------------------
T ss_pred cccceeeeecccCchhhhhhHHhcccccceeECcccCCCCcc--cccCCccccChhhccccc------------------
Confidence 35566777654 56677778888999999999999888875 478888889998888753
Q ss_pred CcccccccchhhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccC-CcCCCCCCCcEEEcCCCCccc
Q psy8551 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD-GAFNGLGRLSALDLRGAGLTN 201 (581)
Q Consensus 123 ~~~~l~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L~L~~~~l~~ 201 (581)
+.++. .+..+++|+.|++++|.++.++ .+..+++|++|++++|.++.+.. ..+..+++|+.|++++|++..
T Consensus 83 -----~~i~~-~~~~~~~L~~L~l~~N~i~~l~--~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 83 -----KKIEN-LDAVADTLEELWISYNQIASLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp -----CSCSS-HHHHHHHCCEEECSEEECCCHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred -----ccccc-cccccccccccccccccccccc--cccccccccccccccchhccccccccccCCCccceeecCCCcccc
Confidence 22211 1223456888888888777663 46667778888888777765542 245666677777777665543
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.99 E-value=1.3e-12 Score=114.28 Aligned_cols=114 Identities=22% Similarity=0.278 Sum_probs=91.5
Q ss_pred hhcCCCCCCcEEeCCCCcCcccCCcccccCccCcEEECCCCcceeccCCcCCCCCCCcEEEcCCCCccccCccccCCCCC
Q psy8551 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212 (581)
Q Consensus 133 ~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~ 212 (581)
..+..+++|++|++++|+|+.++ .+..+++|++|++++|.++.++. ....+++|+.|++++|.++.+. .+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~i~--~l~~l~~L~~L~Ls~N~i~~i~~-~~~~~~~L~~L~l~~N~i~~l~--~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLIKKIEN-LDAVADTLEELWISYNQIASLS--GIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESCCC--CHHHHTTCCEEECCEEEECSCSS-HHHHHHHCCEEECSEEECCCHH--HHHHHHH
T ss_pred hHHhcccccceeECcccCCCCcc--cccCCccccChhhcccccccccc-cccccccccccccccccccccc--ccccccc
Confidence 34777899999999999998875 47889999999999998877653 2334567999999999888763 3667888
Q ss_pred CcEEECCCCcCCccCc-cccCCCCCCCEEECCCCcccccC
Q psy8551 213 LRSLVLTDNRLQSIPT-KQLSKLTRLEELEIGQNGFSMLE 251 (581)
Q Consensus 213 L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~~~~~~~~ 251 (581)
|+.|++++|+++.++. ..+..+++|++|++++|++....
T Consensus 117 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 156 (198)
T d1m9la_ 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHH
T ss_pred ccccccccchhccccccccccCCCccceeecCCCccccCc
Confidence 9999999999987653 46788999999999999876543
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.97 E-value=1.4e-07 Score=78.70 Aligned_cols=40 Identities=20% Similarity=0.150 Sum_probs=16.9
Q ss_pred CCCCCcEEeCCCCcCcccCC--cccccCccCcEEECCCCcce
Q psy8551 137 GLTALRILYLDDNQLRSVPT--PSFIYLGMLAELRVGLNVFT 176 (581)
Q Consensus 137 ~~~~L~~L~l~~~~i~~~~~--~~~~~~~~L~~L~L~~n~~~ 176 (581)
.++.|++|++++|+++.+.. ..+..+++|+.|++++|.++
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~ 104 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 104 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc
Confidence 34445555555554444321 12233444444444444443
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.95 E-value=6.8e-08 Score=80.62 Aligned_cols=82 Identities=21% Similarity=0.163 Sum_probs=47.9
Q ss_pred ccCccCcEEECCCCcceeccC--CcCCCCCCCcEEEcCCCCccccCccccCCCCCCcEEECCCCcCCccCc-------cc
Q psy8551 160 IYLGMLAELRVGLNVFTTLAD--GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT-------KQ 230 (581)
Q Consensus 160 ~~~~~L~~L~L~~n~~~~~~~--~~l~~l~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~-------~~ 230 (581)
..+++|++|++++|.++.+.+ ..+..+++|+.|++++|.++.+....+.....|+.|++.+|.+..... ..
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHH
Confidence 456667777777777665432 234456677777777777666554333334456677777776654322 22
Q ss_pred cCCCCCCCEEE
Q psy8551 231 LSKLTRLEELE 241 (581)
Q Consensus 231 ~~~l~~L~~L~ 241 (581)
+..+|+|+.||
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
Confidence 45566777665
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.62 E-value=2.8e-05 Score=64.54 Aligned_cols=42 Identities=14% Similarity=0.041 Sum_probs=21.7
Q ss_pred cCCCCCCcEEeCCCCcCcccCCc----ccccCccCcEEECCCCcce
Q psy8551 135 FEGLTALRILYLDDNQLRSVPTP----SFIYLGMLAELRVGLNVFT 176 (581)
Q Consensus 135 l~~~~~L~~L~l~~~~i~~~~~~----~~~~~~~L~~L~L~~n~~~ 176 (581)
+...+.|++|++++|.+...... .+...+.|++|++++|.++
T Consensus 40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 85 (167)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence 45556666666666665532111 2233455555555555544
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.40 E-value=2.9e-05 Score=64.49 Aligned_cols=60 Identities=13% Similarity=0.081 Sum_probs=34.1
Q ss_pred cCccEEEcccC-Cccc-----ccccccCCCcccEEEcCCCceeecCC----CCCCCCCcccEEeCCCCCC
Q psy8551 45 PSIQRLVLSTN-RIKT-----VDSAIPIYLSLQHVDLSHTTWLIIPI----GGFEPQEKLVELQLNHNKH 104 (581)
Q Consensus 45 ~~l~~L~L~~~-~i~~-----l~~~~~~~~~L~~L~ls~~~l~~~~~----~~~~~l~~L~~L~l~~n~~ 104 (581)
+++++|+|+++ .++. +-..+...++|++|++++|.++.-.. .++...+.|++|++++|.+
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i 84 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFL 84 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBC
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhc
Confidence 56777777763 3542 22245566677777777776653221 1233445667777776653
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.69 E-value=0.00012 Score=60.64 Aligned_cols=119 Identities=13% Similarity=0.051 Sum_probs=69.0
Q ss_pred ccCCCCCCCEEEcCC-CcCCccC----hhhhcCCCCCcEeecCCCcceeeccccccCCccccEEeecCCCCeeEecCCcc
Q psy8551 400 AFRGLSGLRSLVLTD-NRLQSIP----TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474 (581)
Q Consensus 400 ~~~~~~~L~~L~l~~-n~l~~~~----~~~l~~l~~L~~L~l~~~~i~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 474 (581)
...+.+.|++|++++ +.++... ...+...+.|++|++++|.++......+. ..+
T Consensus 12 ~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~---------------------~~l 70 (166)
T d1io0a_ 12 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALA---------------------EML 70 (166)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHH---------------------HHH
T ss_pred HHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHH---------------------HHH
Confidence 334567888888886 3454322 23456778888888888877653322111 112
Q ss_pred CCCCCCCeeeCCCCCCceeec----CCccCCCCCccEEEcC--CCcce-----eeccccccCCcceEEecCCCcccc
Q psy8551 475 ADNLNLETLTLNKNPKLKIIE----EDALVGLPNLYHLNLK--ENAFT-----SFSESMLAWPELRTIDIAENPIEC 540 (581)
Q Consensus 475 ~~~~~L~~L~l~~~~~l~~~~----~~~~~~l~~L~~L~l~--~n~l~-----~l~~~~~~~~~L~~L~l~~np~~c 540 (581)
...+.++.+++++| .++.-. ...+...++|+.++|+ +|.++ .+.+.+...++|++|+++.+...+
T Consensus 71 ~~~~~l~~l~l~~~-~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~~~ 146 (166)
T d1io0a_ 71 KVNNTLKSLNVESN-FISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 146 (166)
T ss_dssp HHCSSCCEEECCSS-CCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred hhcccchhhhhccc-cccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCCcH
Confidence 22345555555555 222111 1345667788876664 44565 355566678889999888776643
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.65 E-value=0.00026 Score=58.41 Aligned_cols=41 Identities=12% Similarity=0.031 Sum_probs=20.0
Q ss_pred cCCCCCCcEEeCCCCcCcccCCc----ccccCccCcEEECCCCcc
Q psy8551 135 FEGLTALRILYLDDNQLRSVPTP----SFIYLGMLAELRVGLNVF 175 (581)
Q Consensus 135 l~~~~~L~~L~l~~~~i~~~~~~----~~~~~~~L~~L~L~~n~~ 175 (581)
+...++|++|++++|.+...... .+...++++.++++++.+
T Consensus 42 l~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~ 86 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 86 (166)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccc
Confidence 44556666666666655432211 223344555555555444
Done!