Your job contains 1 sequence.
>psy8551
MLVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTV
DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVE
IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD
GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL
EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNLETLTLNKNPKLKTI
EEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRR
NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI
PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADNLNL
ETLTLNKNPKLKIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC
GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLG
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8551
(581 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010452 - symbol:trn "tartan" species:7227 "Drosop... 587 4.6e-57 1
FB|FBgn0023095 - symbol:caps "capricious" species:7227 "D... 578 4.2e-56 1
FB|FBgn0085397 - symbol:Fili "Fish-lips" species:7227 "Dr... 334 2.4e-27 1
ZFIN|ZDB-GENE-071126-1 - symbol:lrrn1 "leucine rich repea... 320 8.8e-26 1
UNIPROTKB|A0N0X6 - symbol:LRRN1 "Leucine-rich repeat neur... 316 2.5e-25 1
UNIPROTKB|Q6UXK5 - symbol:LRRN1 "Leucine-rich repeat neur... 314 4.2e-25 1
UNIPROTKB|Q9H3W5 - symbol:LRRN3 "Leucine-rich repeat neur... 310 1.1e-24 1
RGD|69310 - symbol:Slit2 "slit homolog 2 (Drosophila)" sp... 238 1.7e-24 2
RGD|1564145 - symbol:Lrrn1 "leucine rich repeat neuronal ... 308 2.0e-24 1
MGI|MGI:106038 - symbol:Lrrn1 "leucine rich repeat protei... 307 2.5e-24 1
MGI|MGI:106036 - symbol:Lrrn3 "leucine rich repeat protei... 306 3.2e-24 1
RGD|71066 - symbol:Lrrn3 "leucine rich repeat neuronal 3"... 304 5.4e-24 1
UNIPROTKB|Q6NUI6 - symbol:CHADL "Chondroadherin-like prot... 217 1.7e-23 2
UNIPROTKB|F1LN28 - symbol:Slit2 "Slit homolog 2 protein" ... 238 3.2e-23 2
ZFIN|ZDB-GENE-010306-4 - symbol:slit3 "slit (Drosophila) ... 232 3.4e-23 2
UNIPROTKB|P35858 - symbol:IGFALS "Insulin-like growth fac... 295 3.7e-23 1
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 226 5.9e-23 2
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 226 6.6e-23 2
UNIPROTKB|O75325 - symbol:LRRN2 "Leucine-rich repeat neur... 294 7.3e-23 1
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 223 1.7e-22 3
WB|WBGene00022129 - symbol:lron-11 species:6239 "Caenorha... 286 2.7e-22 1
RGD|69307 - symbol:Slit1 "slit homolog 1 (Drosophila)" sp... 239 1.8e-21 2
UNIPROTKB|O88279 - symbol:Slit1 "Slit homolog 1 protein" ... 239 1.8e-21 2
MGI|MGI:107973 - symbol:Igfals "insulin-like growth facto... 279 2.3e-21 1
UNIPROTKB|F1MT22 - symbol:LGR5 "Uncharacterized protein" ... 282 2.5e-21 1
MGI|MGI:107935 - symbol:Lrig1 "leucine-rich repeats and i... 281 4.4e-21 1
UNIPROTKB|F1LS74 - symbol:Slit1 "Slit homolog 1 protein" ... 226 6.2e-21 2
UNIPROTKB|F1S8Z0 - symbol:SLIT1 "Uncharacterized protein"... 225 1.0e-20 3
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 278 1.5e-20 1
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 278 1.5e-20 1
UNIPROTKB|F1SRC2 - symbol:CHADL "Uncharacterized protein"... 211 1.5e-20 2
UNIPROTKB|O94813 - symbol:SLIT2 "Slit homolog 2 protein" ... 225 2.6e-20 3
UNIPROTKB|F1Q3G2 - symbol:SLIT3 "Uncharacterized protein"... 266 2.6e-20 2
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 268 2.7e-20 2
UNIPROTKB|F1LRE2 - symbol:Igfals "Insulin-like growth fac... 269 3.0e-20 1
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 275 3.2e-20 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 272 4.3e-20 1
RGD|68429 - symbol:Igfals "insulin-like growth factor bin... 267 5.0e-20 1
MGI|MGI:1315203 - symbol:Slit1 "slit homolog 1 (Drosophil... 240 5.7e-20 2
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 214 7.4e-20 2
UNIPROTKB|Q1KS52 - symbol:ALS "Acid-labile subunit" speci... 265 8.5e-20 1
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 263 1.6e-19 2
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 263 1.6e-19 2
UNIPROTKB|F1MJZ4 - symbol:IGFALS "Uncharacterized protein... 262 1.9e-19 1
ZFIN|ZDB-GENE-030722-3 - symbol:slit1a "slit homolog 1a (... 223 2.4e-19 2
ZFIN|ZDB-GENE-041111-75 - symbol:lrig2 "leucine-rich repe... 264 3.1e-19 1
UNIPROTKB|O94898 - symbol:LRIG2 "Leucine-rich repeats and... 264 3.1e-19 1
FB|FBgn0029114 - symbol:Tollo "Tollo" species:7227 "Droso... 237 5.6e-19 2
MGI|MGI:2443718 - symbol:Lrig2 "leucine-rich repeats and ... 256 2.3e-18 1
UNIPROTKB|F1NI07 - symbol:IGFALS "Uncharacterized protein... 252 2.4e-18 1
WB|WBGene00004854 - symbol:slt-1 species:6239 "Caenorhabd... 219 5.5e-18 2
UNIPROTKB|Q6UXM1 - symbol:LRIG3 "Leucine-rich repeats and... 263 6.5e-18 2
MGI|MGI:2441805 - symbol:Lgr6 "leucine-rich repeat-contai... 251 7.2e-18 1
UNIPROTKB|F1MSM8 - symbol:SLITRK6 "Uncharacterized protei... 167 7.3e-18 2
UNIPROTKB|F1ND28 - symbol:TLR21 "Uncharacterized protein"... 197 7.3e-18 2
UNIPROTKB|F1NR92 - symbol:SLIT2 "Uncharacterized protein"... 225 8.5e-18 2
UNIPROTKB|F1RR92 - symbol:SLIT3 "Uncharacterized protein"... 259 1.1e-17 2
UNIPROTKB|F1RP63 - symbol:SLITRK6 "Uncharacterized protei... 165 1.5e-17 2
UNIPROTKB|F1MMM6 - symbol:SLIT3 "Uncharacterized protein"... 257 1.9e-17 2
RGD|1560339 - symbol:Lgr6 "leucine-rich repeat-containing... 247 2.0e-17 1
RGD|1306550 - symbol:Slitrk6 "SLIT and NTRK-like family, ... 160 2.1e-17 2
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 243 2.1e-17 1
UNIPROTKB|E2RFX7 - symbol:SLITRK6 "Uncharacterized protei... 159 2.7e-17 2
FB|FBgn0034540 - symbol:Lrt "Leucine-rich tendon-specific... 244 3.2e-17 1
UNIPROTKB|Q8TF66 - symbol:LRRC15 "Leucine-rich repeat-con... 241 3.6e-17 1
UNIPROTKB|Q9H5Y7 - symbol:SLITRK6 "SLIT and NTRK-like pro... 165 4.0e-17 2
MGI|MGI:2443198 - symbol:Slitrk6 "SLIT and NTRK-like fami... 158 4.4e-17 2
MGI|MGI:1315205 - symbol:Slit2 "slit homolog 2 (Drosophil... 227 5.7e-17 2
ZFIN|ZDB-GENE-080327-15 - symbol:lrrtm4l1 "leucine rich r... 239 5.8e-17 1
ZFIN|ZDB-GENE-091214-3 - symbol:lingo4b "leucine rich rep... 246 6.2e-17 2
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 243 6.7e-17 1
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 235 7.3e-17 2
UNIPROTKB|E1C7Z9 - symbol:E1C7Z9 "Uncharacterized protein... 240 8.9e-17 1
WB|WBGene00022789 - symbol:lron-2 species:6239 "Caenorhab... 236 1.3e-16 1
MGI|MGI:2156367 - symbol:Tlr3 "toll-like receptor 3" spec... 239 1.4e-16 1
UNIPROTKB|P40197 - symbol:GP5 "Platelet glycoprotein V" s... 230 1.8e-16 2
UNIPROTKB|F1NF14 - symbol:SLIT3 "Uncharacterized protein"... 240 1.8e-16 1
ZFIN|ZDB-GENE-041210-129 - symbol:lrrc4.1 "leucine rich r... 237 2.1e-16 1
UNIPROTKB|E1BP10 - symbol:SLIT1 "Uncharacterized protein"... 239 2.5e-16 1
FB|FBgn0034476 - symbol:Toll-7 "Toll-7" species:7227 "Dro... 203 3.3e-16 2
ZFIN|ZDB-GENE-031113-8 - symbol:lrrc15 "leucine rich repe... 232 3.3e-16 1
UNIPROTKB|E1C2F8 - symbol:LGR5 "Uncharacterized protein" ... 243 3.6e-16 2
FB|FBgn0034083 - symbol:lbk "lambik" species:7227 "Drosop... 237 3.6e-16 1
UNIPROTKB|E7EW58 - symbol:LRRN3 "Leucine-rich repeat neur... 209 4.2e-16 1
UNIPROTKB|F1NZH1 - symbol:SLITRK6 "Uncharacterized protei... 160 4.5e-16 2
UNIPROTKB|F1SGM5 - symbol:LGR4 "Uncharacterized protein" ... 234 4.6e-16 1
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 230 5.9e-16 1
UNIPROTKB|Q7L0X0 - symbol:TRIL "TLR4 interactor with leuc... 231 8.5e-16 1
MGI|MGI:2182081 - symbol:Lrrc4 "leucine rich repeat conta... 229 9.7e-16 1
RGD|1307733 - symbol:Lgr5 "leucine rich repeat containing... 231 1.0e-15 1
FB|FBgn0259677 - symbol:CG42346 species:7227 "Drosophila ... 234 1.1e-15 1
ZFIN|ZDB-GENE-050522-533 - symbol:lrrc4c "leucine rich re... 228 1.2e-15 1
MGI|MGI:1341817 - symbol:Lgr5 "leucine rich repeat contai... 230 1.3e-15 1
FB|FBgn0261269 - symbol:conv "convoluted" species:7227 "D... 231 1.3e-15 1
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 221 1.3e-15 2
WB|WBGene00006593 - symbol:tol-1 species:6239 "Caenorhabd... 176 1.6e-15 2
UNIPROTKB|E1BG29 - symbol:GP5 "Uncharacterized protein" s... 226 1.7e-15 1
MGI|MGI:3027390 - symbol:Lrrc4b "leucine rich repeat cont... 227 1.9e-15 1
RGD|1307121 - symbol:Lrrc4b "leucine rich repeat containi... 227 1.9e-15 1
UNIPROTKB|E1BPK8 - symbol:LRRC4B "Uncharacterized protein... 227 1.9e-15 1
WARNING: Descriptions of 707 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 139/351 (39%), Positives = 192/351 (54%)
Query: 50 LVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFP 106
L LS+N + T+ Y LQ V L+H I F + L L N+
Sbjct: 87 LDLSSNHLMTIPQRTFAYQKKLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRGNQISELH 146
Query: 107 QQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS-FIYLGML 165
Q ++ + + G+NRI +D F+GL+ LRILYLDDN L +VP P F + L
Sbjct: 147 QGTFTPLLKIEELNL-GENRIGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSL 205
Query: 166 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 225
AEL +G+N ++ AF L L+ L+L+GA L NIS ++F GL LR L L+DNRL
Sbjct: 206 AELFLGMNTLQSIQADAFQDLKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDR 265
Query: 226 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 285
IP+ LSKL RLE+L +GQN F ++ G F GL LKRLE+ GA L RV GAF+D
Sbjct: 266 IPSVGLSKLVRLEQLSLGQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGN 325
Query: 286 XXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIE 345
++EGAL GL L H+ LK NA TS +E + W +L+T+D++ENP+
Sbjct: 326 LEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLS 385
Query: 346 CGCNILWLREMLVRRNTSA-----VFCNSPAPLKYKSLISLSAEDLGCAGA 391
C C ++WL +LV +N S + C P L+ +SL L+ +GC A
Sbjct: 386 CDCRVMWLHNLLVAKNASQDDVSELLCEFPERLRGESLRHLNPAMMGCTHA 436
Score = 411 (149.7 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 117/384 (30%), Positives = 183/384 (47%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL-EI-TGAS 270
++ LV+ N++++I + + L L++ N + F +Y K+L E+ +
Sbjct: 61 IQRLVIKSNKIKTIDSS-IQFYAELTFLDLSSNHLMTIPQRTF---AYQKKLQEVHLNHN 116
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN--------AFT 322
+ ++ F + +G L + LNL EN AF
Sbjct: 117 KIGQISNKTFIGLSAVTVLNLRGNQISE-LHQGTFTPLLKIEELNLGENRIGYLDPKAFD 175
Query: 323 SFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLS 382
S+ + + + + +P+ + L E+ + NT S ++ L L+
Sbjct: 176 GLSQLRILYLDDNALTTVPDPVIFQA-MPSLAELFLGMNT----LQSIQADAFQDLKGLT 230
Query: 383 AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
+L GA L NIS ++F GL LR L L+DNRL IP+ LSKL RLE+L +GQN F
Sbjct: 231 RLEL--KGASLRNISHDSFLGLQELRILDLSDNRLDRIPSVGLSKLVRLEQLSLGQNDFE 288
Query: 443 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGL 502
++ G F GL LKRLE+ GA L RV GAF+D ++E AL GL
Sbjct: 289 VISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGL 348
Query: 503 PNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA---- 558
L H+ LK NA TS +E + W +L+T+D++ENP+ C C ++WL +LV +N S
Sbjct: 349 SQLKHVVLKANALTSLAEGLFPWKDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVS 408
Query: 559 -VFCNSPAPLKYKSLISLSAEDLG 581
+ C P L+ +SL L+ +G
Sbjct: 409 ELLCEFPERLRGESLRHLNPAMMG 432
Score = 291 (107.5 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 93/292 (31%), Positives = 135/292 (46%)
Query: 33 EANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQE 92
E LDV+P NPSIQRLV+ +N+IKT+DS+I Y L +DLS + IP F Q+
Sbjct: 47 EGQLDVLPIALNPSIQRLVIKSNKIKTIDSSIQFYAELTFLDLSSNHLMTIPQRTFAYQK 106
Query: 93 KLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQ 150
KL E+ LNHNK + + + + + G N+IS + Q F L + L L +N+
Sbjct: 107 KLQEVHLNHNKIGQISNKTFIGLSAVTVLNLRG-NQISELHQGTFTPLLKIEELNLGENR 165
Query: 151 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGA-FNGLGRLSALDLRGAGLTNISDNAFRG 209
+ + +F L L L + N TT+ D F + L+ L L L +I +AF+
Sbjct: 166 IGYLDPKAFDGLSQLRILYLDDNALTTVPDPVIFQAMPSLAELFLGMNTLQSIQADAFQD 225
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE--IT 267
L GL L L L++I L L L++ N + + GLS L RLE
Sbjct: 226 LKGLTRLELKGASLRNISHDSFLGLQELRILDLSDNRLDRIPS---VGLSKLVRLEQLSL 282
Query: 268 GASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
G ++ + +GAF + GA NL +LNL N
Sbjct: 283 GQNDFEVISEGAFMGLKQLKRLEVNGALRLKRVMTGAFSDNGNLEYLNLSSN 334
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 145/352 (41%), Positives = 191/352 (54%)
Query: 50 LVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQ 108
L LS N + T+ + + + LQ + L H + F + L L N +
Sbjct: 100 LDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGN--LIAE 157
Query: 109 IVCSIISP--RRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP-SFIYLGM 164
+ SP + E+ GQNRIS ID +GL LR+LYLDDN L +VP +F L
Sbjct: 158 LEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHS 217
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
LAEL +G N F T+ GAF L L+ LDLRGAGL NIS +A +GL LR L L+DNRL
Sbjct: 218 LAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLP 277
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 284
+IPT +L RLE+L IGQN F ++ +G F GL L+ LE+TGA L RV GAF+
Sbjct: 278 AIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNT 337
Query: 285 XXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 344
+ AL GLP+L + LK N +S E ++ W +L+T+D++ENP
Sbjct: 338 NLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQTLDLSENPF 397
Query: 345 ECGCNILWLREMLVRRNTSA----VFCNSPAPLKYKSLISLSAEDLGCA-GA 391
EC C +LWLR +LV RN S V C P L+ L L+ LGCA GA
Sbjct: 398 ECDCRLLWLRHLLVSRNASGQYAPVICAYPTALRDLPLAHLAEPLLGCAHGA 449
Score = 403 (146.9 bits), Expect = 8.8e-37, P = 8.8e-37
Identities = 120/380 (31%), Positives = 179/380 (47%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
++ LV+ +N+L++I + + +L L++ N + F + L+ L + + +
Sbjct: 74 IQRLVIKNNKLKTIDSS-MQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDH-NKI 131
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AW 331
+V F +E + L LNL +N + L
Sbjct: 132 GQVSNKTFLGLSTISVLNLRGNLIAE-LEYRTFSPMVKLAELNLGQNRISHIDPHALDGL 190
Query: 332 PELRTIDIAEN-----PIECGCNILW-LREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385
LR + + +N P E L L E+ + N+ F P ++ L L+ D
Sbjct: 191 DNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNS---FMTIPGGA-FQDLKGLTRLD 246
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 445
L GAGL NIS +A +GL LR L L+DNRL +IPT +L RLE+L IGQN F ++
Sbjct: 247 L--RGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVIS 304
Query: 446 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNL 505
+G F GL L+ LE+TGA L RV GAF+ + AL GLP+L
Sbjct: 305 SGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHL 364
Query: 506 YHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA----VFC 561
+ LK N +S E ++ W +L+T+D++ENP EC C +LWLR +LV RN S V C
Sbjct: 365 STVVLKANQLSSLDEGLVPWADLQTLDLSENPFECDCRLLWLRHLLVSRNASGQYAPVIC 424
Query: 562 NSPAPLKYKSLISLSAEDLG 581
P L+ L L+ LG
Sbjct: 425 AYPTALRDLPLAHLAEPLLG 444
Score = 301 (111.0 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 95/320 (29%), Positives = 138/320 (43%)
Query: 30 NLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFE 89
N E LDV+P NP+IQRLV+ N++KT+DS++ Y L +DLS L IP F
Sbjct: 57 NCGEGTLDVLPIALNPAIQRLVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFA 116
Query: 90 PQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLD 147
KL EL L+HNK + + + + + G N I+ ++ F + L L L
Sbjct: 117 YHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRG-NLIAELEYRTFSPMVKLAELNLG 175
Query: 148 DNQLRSVPTPSFIYLGMLAELRVGLNVFTTL-ADGAFNGLGRLSALDLRGAGLTNISDNA 206
N++ + + L L L + N TT+ + F L L+ L L I A
Sbjct: 176 QNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGA 235
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F+ L GL L L L +I L L L L++ N + F+ L L++L I
Sbjct: 236 FQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNI 295
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENA-FTSFS 325
G ++ + GAF+ +E GA G NL HLNL N S
Sbjct: 296 -GQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELS 354
Query: 326 ESMLAW-PELRTIDIAENPI 344
L P L T+ + N +
Sbjct: 355 SIALGGLPHLSTVVLKANQL 374
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 334 (122.6 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 92/322 (28%), Positives = 157/322 (48%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-- 103
++ L LS N I+T+ S Y S L+ ++LS + F+ L+ L L+ N+
Sbjct: 98 LEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIE 157
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
+ + S +++ N +S ++ CF+G+ L +L +N+L VP + +L
Sbjct: 158 TVHPTALSDLASLVELDLTNNNIVS-LEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLH 216
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + LN+ + + +F GL L AL ++G ++ + +AF GL L+ L L+DN L
Sbjct: 217 ALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNL 276
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADX 283
+PT+QLSKL+ L L +G N FS L A F L +L+ L ++ L R+ AF D
Sbjct: 277 TMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDN 336
Query: 284 XXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENP 343
I G PN+ + ++ N+ + + +L+ + + +NP
Sbjct: 337 THLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQKLYLGDNP 396
Query: 344 IECGCNILWLREMLVRRNTSAV 365
++C C++LWL LV N V
Sbjct: 397 LQCNCSLLWLWR-LVTGNFEGV 417
Score = 253 (94.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 89/345 (25%), Positives = 147/345 (42%)
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL-TRVR 276
LT NR++++ L +LE L++ QN L + F+ S L+ L ++ NL + +
Sbjct: 80 LTVNRIRTLEFS-LPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLS--RNLVSSLH 136
Query: 277 KGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRT 336
K AF + AL L +L L+L N S ++
Sbjct: 137 KHAFKGLTNLLLLDLSFNRIET-VHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLE 195
Query: 337 IDIAENP--IECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
+ + N ++ + LW L + S ++ L L A L G ++
Sbjct: 196 VLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLA--LSVQGNVMS 253
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
+ +AF GL L+ L L+DN L +PT+QLSKL+ L L +G N FS L A F L +
Sbjct: 254 ELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFH 313
Query: 455 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENA 514
L+ L ++ L R+ AF D I G PN+ + ++ N+
Sbjct: 314 LRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNS 373
Query: 515 FTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 559
+ + +L+ + + +NP++C C++LWL LV N V
Sbjct: 374 LQTLYSAQFPVDQLQKLYLGDNPLQCNCSLLWLWR-LVTGNFEGV 417
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 65/289 (22%), Positives = 120/289 (41%)
Query: 33 EANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQE 92
+A L+ +P NP + + L+ NRI+T++ ++P Y+ L+ +DLS + FE Q
Sbjct: 61 DAALEDVPIQLNPETKYINLTVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQS 120
Query: 93 KLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQ 150
+L L L+ N + + + +++ NRI + L +L L L +N
Sbjct: 121 ELRTLNLSRNLVSSLHKHAFKGLTNLLLLDL-SFNRIETVHPTALSDLASLVELDLTNNN 179
Query: 151 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGL 210
+ S+ F + L L N + L L +LD+ + + +++F GL
Sbjct: 180 IVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGL 239
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
L +L + N + + L L+ L++ N +M+ LS L L + G +
Sbjct: 240 KELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNL-GGN 298
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
+++ AF + I+ A V +L L+L N
Sbjct: 299 RFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNN 347
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 320 (117.7 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 106/379 (27%), Positives = 166/379 (43%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGF 88
CN + +L IP + + Q L+L +N I + L+L +DLS + I G
Sbjct: 59 CN--DLHLTRIPGNLSADTQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFSNIRDIGL 116
Query: 89 EPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
+L L L N+ P + + + + + I N+IS I F GL L L+L
Sbjct: 117 TNMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYI-NHNQISSIAPNAFAGLRNLLRLHL 175
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
+ N+L+++ + F L L +G N + D F L L +L L G LT+I NA
Sbjct: 176 NSNRLKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNA 235
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F GL L SL DN+L +P L KL L+ L++ +N ++ G FK + LK L I
Sbjct: 236 FVGLDNLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGI 295
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE 326
L + + A + + A LP L L L NA S +
Sbjct: 296 NNMGELVSIDRFALDNLPELTKLEATNNPKFSYVSRLAFRDLPALESLMLNNNALNSLYQ 355
Query: 327 SML-AWPELRTIDIAENPIECGCNILWL--REMLVR-RNTSAVFCNSPAPLKYKSLISLS 382
+ + P LR I I NP+ C C I W+ + +R ++FC P ++ + + +
Sbjct: 356 ATADSLPNLREISIHSNPLRCDCVIQWMSSNKTTIRFMEPLSMFCTMPIEVRGQRVRDVF 415
Query: 383 AEDLGCAGAGLTNISDNAF 401
+ + +G L IS + F
Sbjct: 416 SREP--SGQCLPMISHDTF 432
Score = 215 (80.7 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 61/200 (30%), Positives = 89/200 (44%)
Query: 373 LKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
L +K L +L + L AG LT+I NAF GL L SL DN+L +P L KL L+
Sbjct: 210 LNFKPLTNLRS--LVLAGMELTDIPGNAFVGLDNLESLSFYDNKLVRVPQTALQKLPNLK 267
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 492
L++ +N ++ G FK + LK L I L + + A +
Sbjct: 268 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSIDRFALDNLPELTKLEATNNPKFS 327
Query: 493 IIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--RE 549
+ A LP L L L NA S ++ + P LR I I NP+ C C I W+ +
Sbjct: 328 YVSRLAFRDLPALESLMLNNNALNSLYQATADSLPNLREISIHSNPLRCDCVIQWMSSNK 387
Query: 550 MLVR-RNTSAVFCNSPAPLK 568
+R ++FC P ++
Sbjct: 388 TTIRFMEPLSMFCTMPIEVR 407
Score = 121 (47.7 bits), Expect = 0.00070, P = 0.00070
Identities = 45/148 (30%), Positives = 67/148 (45%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF-SMLEAGCFKG 451
+++I+ NAF GL L L L NRL++I ++ LE L IG+N +L+ FK
Sbjct: 156 ISSIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTPNLEILMIGENPVVGILDLN-FKP 214
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLK 511
L+ L+ L + G LT + AF + + AL LPNL L+L
Sbjct: 215 LTNLRSLVLAGME-LTDIPGNAFVGLDNLESLSFYDNKLVRV-PQTALQKLPNLKFLDLN 272
Query: 512 ENAFTSFSE----SMLAWPELRTIDIAE 535
+N E +ML EL ++ E
Sbjct: 273 KNPIHKIQEGDFKNMLRLKELGINNMGE 300
>UNIPROTKB|A0N0X6 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:EF093509 IPI:IPI00699748 RefSeq:NP_001074207.1
UniGene:Bt.17579 ProteinModelPortal:A0N0X6 PRIDE:A0N0X6
Ensembl:ENSBTAT00000001560 GeneID:539619 KEGG:bta:539619 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 InParanoid:A0N0X6 OMA:GINNMGE OrthoDB:EOG4XKV6G
BioCyc:CATTLE:539619-MONOMER NextBio:20878110 Uniprot:A0N0X6
Length = 716
Score = 316 (116.3 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 114/411 (27%), Positives = 178/411 (43%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRI-KTVDSAIPIYLSLQHVDLSHTTWLIIPIGG 87
CN + L IPS+ + Q L+L +N I KTVD ++ +L +D S + I G
Sbjct: 58 CN--DLRLTRIPSNLSSDTQVLLLQSNNIAKTVDELQQLF-NLTELDFSQNNFTNIKEVG 114
Query: 88 FEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF-GQNRISRIDQACFEGLTALRILYL 146
+L L L N+ C E++ N+IS I F GL L L+L
Sbjct: 115 LANLTQLTTLHLEENQITEMNDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHL 174
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
+ N+L+ + + F L L +G N + D F L L +L L G LT+I NA
Sbjct: 175 NSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNA 234
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
GL L SL DN+L +P L K+ L+ L++ +N ++ G FK + LK L I
Sbjct: 235 LVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGI 294
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS-FS 325
L V + A + I A +P L L L NA + +
Sbjct: 295 NNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQ 354
Query: 326 ESMLAWPELRTIDIAENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYKSLISLS 382
+++ + P LR I I NP+ C C I W+ + +R ++FC P + + + +
Sbjct: 355 KTVESLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEPLSMFCAMPPEYRGQQVKEVL 414
Query: 383 AEDLGCAGAGLTNISDNAFRG-LS-GLRSLVLTDNRLQSIPTKQLSKLTRL 431
+D + L IS + F L+ + + V D R + P ++ +T L
Sbjct: 415 IQD--SSEQCLPMISHDTFPNHLNMDIGTTVFLDCRAMAEPEPEIYWVTPL 463
Score = 198 (74.8 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 59/211 (27%), Positives = 94/211 (44%)
Query: 373 LKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
+ +K L +L + L AG LT+I NA GL L SL DN+L +P L K+ L+
Sbjct: 209 MNFKPLSNLRS--LVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLK 266
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 492
L++ +N ++ G FK + LK L I L V + A +
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLS 326
Query: 493 IIEEDALVGLPNLYHLNLKENAFTS-FSESMLAWPELRTIDIAENPIECGCNILWLR--E 549
I A +P L L L NA + + +++ + P LR I I NP+ C C I W+ +
Sbjct: 327 YIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIHWINSNK 386
Query: 550 MLVR-RNTSAVFCNSPAPLKYKSLISLSAED 579
+R ++FC P + + + + +D
Sbjct: 387 TNIRFMEPLSMFCAMPPEYRGQQVKEVLIQD 417
>UNIPROTKB|Q6UXK5 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CleanEx:HS_LRRN1 CTD:57633 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE OrthoDB:EOG4XKV6G EMBL:AB074161
EMBL:AB040930 EMBL:AY358312 EMBL:BC034947 EMBL:AK023273
IPI:IPI00021485 RefSeq:NP_065924.3 UniGene:Hs.163244
ProteinModelPortal:Q6UXK5 SMR:Q6UXK5 STRING:Q6UXK5
PhosphoSite:Q6UXK5 DMDM:60390188 PaxDb:Q6UXK5 PRIDE:Q6UXK5
DNASU:57633 Ensembl:ENST00000319331 GeneID:57633 KEGG:hsa:57633
UCSC:uc003bpt.4 GeneCards:GC03P003816 HGNC:HGNC:20980 HPA:HPA011071
neXtProt:NX_Q6UXK5 PharmGKB:PA134935557 InParanoid:Q6UXK5
GenomeRNAi:57633 NextBio:64341 Bgee:Q6UXK5 Genevestigator:Q6UXK5
GermOnline:ENSG00000175928 Uniprot:Q6UXK5
Length = 716
Score = 314 (115.6 bits), Expect = 4.2e-25, P = 4.2e-25
Identities = 114/409 (27%), Positives = 177/409 (43%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRI-KTVDSAIPIYLSLQHVDLSHTTWLIIPIGG 87
CN + L IPS+ + Q L+L +N I KTVD ++ +L +D S + I G
Sbjct: 58 CN--DLRLTRIPSNLSSDTQVLLLQSNNIAKTVDELQQLF-NLTELDFSQNNFTNIKEVG 114
Query: 88 FEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF-GQNRISRIDQACFEGLTALRILYL 146
+L L L N+ C E++ N+IS I F GL L L+L
Sbjct: 115 LANLTQLTTLHLEENQITEMTDYCLQDLSNLQELYINHNQISTISAHAFAGLKNLLRLHL 174
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
+ N+L+ + + F L L +G N + D F L L +L L G LT+I NA
Sbjct: 175 NSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLANLRSLVLAGMYLTDIPGNA 234
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
GL L SL DN+L +P L K+ L+ L++ +N ++ G FK + LK L I
Sbjct: 235 LVGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGI 294
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS-FS 325
L V + A + I A +P L L L NA + +
Sbjct: 295 NNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAIYQ 354
Query: 326 ESMLAWPELRTIDIAENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYKSLISLS 382
+++ + P LR I I NP+ C C I W+ + +R ++FC P K + +
Sbjct: 355 KTVESLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEPLSMFCAMPPEYKGHQVKEVL 414
Query: 383 AEDLGCAGAGLTNISDNAFRG-LS-GLRSLVLTDNRLQSIPTKQLSKLT 429
+D + L IS ++F L+ + + V D R + P ++ +T
Sbjct: 415 IQD--SSEQCLPMISHDSFPNRLNVDIGTTVFLDCRAMAEPEPEIYWVT 461
Score = 200 (75.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 59/200 (29%), Positives = 89/200 (44%)
Query: 373 LKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
+ +K L +L + L AG LT+I NA GL L SL DN+L +P L K+ L+
Sbjct: 209 MNFKPLANLRS--LVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQKVPNLK 266
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 492
L++ +N ++ G FK + LK L I L V + A +
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLS 326
Query: 493 IIEEDALVGLPNLYHLNLKENAFTS-FSESMLAWPELRTIDIAENPIECGCNILWLR--E 549
I A +P L L L NA + + +++ + P LR I I NP+ C C I W+ +
Sbjct: 327 YIHRLAFRSVPALESLMLNNNALNAIYQKTVESLPNLREISIHSNPLRCDCVIHWINSNK 386
Query: 550 MLVR-RNTSAVFCNSPAPLK 568
+R ++FC P K
Sbjct: 387 TNIRFMEPLSMFCAMPPEYK 406
>UNIPROTKB|Q9H3W5 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030131
HOGENOM:HOG000252914 HOVERGEN:HBG052361 EMBL:AF134481 EMBL:AB060967
EMBL:AY358280 EMBL:CR457397 EMBL:AL442092 EMBL:BC035133
IPI:IPI00465126 RefSeq:NP_001093128.1 RefSeq:NP_001093130.1
RefSeq:NP_060804.3 UniGene:Hs.3781 ProteinModelPortal:Q9H3W5
SMR:Q9H3W5 STRING:Q9H3W5 DMDM:74761421 PRIDE:Q9H3W5 DNASU:54674
Ensembl:ENST00000308478 Ensembl:ENST00000422987
Ensembl:ENST00000451085 GeneID:54674 KEGG:hsa:54674 UCSC:uc003vfs.4
CTD:54674 GeneCards:GC07P110731 HGNC:HGNC:17200 neXtProt:NX_Q9H3W5
PharmGKB:PA30468 InParanoid:Q9H3W5 OMA:RWINMNK OrthoDB:EOG4MGS6W
PhylomeDB:Q9H3W5 GenomeRNAi:54674 NextBio:57220 ArrayExpress:Q9H3W5
Bgee:Q9H3W5 CleanEx:HS_LRRN3 Genevestigator:Q9H3W5 Uniprot:Q9H3W5
Length = 708
Score = 310 (114.2 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 99/370 (26%), Positives = 161/370 (43%)
Query: 23 STRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLI 82
ST D CN + L P+ + Q L+L TN I ++ + ++L +DLS
Sbjct: 51 STVD--CN--DLGLLTFPARLPANTQILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSS 106
Query: 83 IPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
+ + +L+ + L NK P++ + + + + + I N +S I F GL
Sbjct: 107 VTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYI-NHNLLSTISPGAFIGLHN 165
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
L L+L+ N+L+ + + F L L L +G N + D F L L +L + G LT
Sbjct: 166 LLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLT 225
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 260
I DNA GL L S+ DNRL +P L K+ L+ L++ +N + + G F + +
Sbjct: 226 EIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLH 285
Query: 261 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENA 320
LK L I L + A + I A LP L L L NA
Sbjct: 286 LKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNA 345
Query: 321 FTSFSESML-AWPELRTIDIAENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYK 376
++ + + P L+ I I NPI C C I W+ + +R ++FC P + +
Sbjct: 346 LSALYHGTIESLPNLKEISIHSNPIRCDCVIRWMNMNKTNIRFMEPDSLFCVDPPEFQGQ 405
Query: 377 SLISLSAEDL 386
++ + D+
Sbjct: 406 NVRQVHFRDM 415
Score = 220 (82.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 75/289 (25%), Positives = 121/289 (41%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+ E L L NL L + N ++ S + + L + + N ++ N W + L
Sbjct: 131 LPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQM-INSKWF-DALP 188
Query: 359 RRNTSAVFCNSPAPLK---YKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
+ N +K +K LI+L + L AG LT I DNA GL L S+ DN
Sbjct: 189 NLEILMIGENPIIRIKDMNFKPLINLRS--LVIAGINLTEIPDNALVGLENLESISFYDN 246
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
RL +P L K+ L+ L++ +N + + G F + +LK L I L + A
Sbjct: 247 RLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDSLAVD 306
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIA 534
+ I +A LP L L L NA ++ + + P L+ I I
Sbjct: 307 NLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKEISIH 366
Query: 535 ENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDL 580
NPI C C I W+ + +R ++FC P + +++ + D+
Sbjct: 367 SNPIRCDCVIRWMNMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDM 415
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 38/134 (28%), Positives = 67/134 (50%)
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFC--NSPAPLKYKSLISLSAEDL 386
W R+I + + ++C N L L R NT + N+ A ++Y + ++ L
Sbjct: 40 WFTPRSIYMEASTVDC--NDLGLLTFPARLPANTQILLLQTNNIAKIEYSTDFPVNLTGL 97
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 446
+ L+++++ + + L S+ L +N+L +P K LS+L+ L+EL I N S +
Sbjct: 98 DLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISP 157
Query: 447 GCFKGLSYLKRLEI 460
G F GL L RL +
Sbjct: 158 GAFIGLHNLLRLHL 171
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 238 (88.8 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 88/361 (24%), Positives = 157/361 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D RG GLT I N ++ +R L N ++ IP S +L L++ N S L
Sbjct: 288 VDCRGKGLTEIPTNLPETITEIR---LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELA 344
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+GL L L + G + +T + K F + + A L NL
Sbjct: 345 PDAFQGLRSLNSLVLYG-NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNL 402
Query: 312 YHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCN 368
L+L +N + ++ A ++T+ +A+NP C C++ WL + L TS C
Sbjct: 403 NLLSLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCT 462
Query: 369 SPAPLKYKSLISLSAEDLGCAGAG--LTNISDNAFRGLS---GLR----SLVLTDNRLQS 419
SP L K + + ++ C+G + +S + F L+ R ++ ++ +L
Sbjct: 463 SPRRLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 522
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
IP + + T EL + N F++LEA G FK L L+++ ++ + +T + +GAF +
Sbjct: 523 IPD-HIPQYTA--ELRLNNNEFTVLEATGIFKKLPQLRKINLSN-NKITDIEEGAF-EGA 577
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAWPELRTIDIAENP 537
++ GL +L L L+ N + ++S +R + + +N
Sbjct: 578 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQ 637
Query: 538 I 538
I
Sbjct: 638 I 638
Score = 203 (76.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 74/293 (25%), Positives = 127/293 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL G +T I+ F GL LR L L +N++ +I L LE L + +N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFP 119
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F G + L RL+++ + + + + AF IE+GA L +L
Sbjct: 120 ELLFLGTAKLYRLDLS-ENQIQAIPRKAFRGAVDIKNLQLDYNQISC-IEDGAFRALRDL 177
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T S S P+LRT + N + C C++ WL + L +R ++ C
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRS-LVLT-DNRLQSIPTKQLS 426
P+ L+ ++ + + C+ + S A S L + T N + K L+
Sbjct: 238 GPSHLRGHNVAEVQKREFVCSDEEEGHQSFMA-PSCSVLHCPIACTCSNNIVDCRGKGLT 296
Query: 427 KL-TRLEE----LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
++ T L E + + QN ++ G F L+RL+++ + ++ + AF
Sbjct: 297 EIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSN-NQISELAPDAF 348
Score = 169 (64.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 52/188 (27%), Positives = 81/188 (43%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
C G GLT I N ++ +R L N ++ IP S +L L++ N S L
Sbjct: 290 CRGKGLTEIPTNLPETITEIR---LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPD 346
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
F+GL L L + G + +T + K F + + DA L NL
Sbjct: 347 AFQGLRSLNSLVLYG-NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 404
Query: 508 LNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSP 564
L+L +N + ++ A ++T+ +A+NP C C++ WL + L TS C SP
Sbjct: 405 LSLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSP 464
Query: 565 APLKYKSL 572
L K +
Sbjct: 465 RRLANKRI 472
Score = 168 (64.2 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 56/209 (26%), Positives = 88/209 (42%)
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
S V C+ A I + E L G +T I+ F GL LR L L +N++ +I
Sbjct: 37 STVDCHGLALRIVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIER 96
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
L LE L + +N + F G + L RL+++ + + + + AF
Sbjct: 97 GAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLS-ENQIQAIPRKAFRGAVDIKN 155
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECG 541
IE+ A L +L L L N T S S P+LRT + N + C
Sbjct: 156 LQLDYNQIS-CIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 214
Query: 542 CNILWLREMLVRRNTSAVF--CNSPAPLK 568
C++ WL + L +R ++ C P+ L+
Sbjct: 215 CHLAWLSDWLRQRPRVGLYTQCMGPSHLR 243
Score = 165 (63.1 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 89/399 (22%), Positives = 154/399 (38%)
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
I AF LR L L++N++ + L L L + N + L F+GL L
Sbjct: 319 IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 378
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
+ L + A+ + +R AF D + +G L + ++L +N F
Sbjct: 379 QLL-LLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT-VAKGTFSALRAIQTMHLAQNPF 436
Query: 322 TSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRN---TSAVF-CNSPAPLKYK 376
+ L W L + NPIE G R + +R S F C+ + K
Sbjct: 437 --ICDCHLKW--LADY-LHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGTEDYRSK 491
Query: 377 ----SLISLSAED--------LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TK 423
L+ + + C+ L I D+ + + LR L +N + T
Sbjct: 492 LSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELR---LNNNEFTVLEATG 548
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
KL +L ++ + N + +E G F+G S + + +T ++ L V+ F
Sbjct: 549 IFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLT-SNRLENVQHKMFKGLESLKTL 607
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGC 542
+ D+ GL ++ L+L +N T+ + L T+++ NP C C
Sbjct: 608 MLRSNRIS-CVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNC 666
Query: 543 NILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
++ WL E L R+ T C P LK + ++ +D
Sbjct: 667 HLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 705
Score = 161 (61.7 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 166 AELRVGLNVFTTL-ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
AELR+ N FT L A G F L +L ++L +T+I + AF G SG+ ++LT NRL+
Sbjct: 532 AELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLE 591
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
++ K L L+ L + N S + F GL ++ L + + +T V GAF
Sbjct: 592 NVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYD-NQITTVAPGAF 646
Score = 149 (57.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/155 (29%), Positives = 73/155 (47%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+++ G N I+RI + F GL LRIL L +N++ ++ +F L L LR+ N
Sbjct: 59 RLDLNGNN-ITRITKTDFAGLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQL 117
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ F G +L LDL + I AFRG +++L L N++ I L L
Sbjct: 118 FPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDL 177
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
E L + N + L F + L+ + ++NL
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLH-SNNL 211
Score = 132 (51.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 44/163 (26%), Positives = 73/163 (44%)
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
H P I C+ S V+ G+ ++ I E +T +R L+ N +R +P +F
Sbjct: 276 HCP--IACTC-SNNIVDCRGKG-LTEIPTNLPETITEIR---LEQNSIRVIPPGAFSPYK 328
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + N + LA AF GL L++L L G +T + + F GL L+ L+L N++
Sbjct: 329 KLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI 388
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ L L L + N + G F L ++ + +
Sbjct: 389 NCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHL 431
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I I F LR L L +NQ+ + +F L L L + N T L F
Sbjct: 313 QNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLF 372
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L L + + +AF+ L L L L DN+LQ++ S L ++ + +
Sbjct: 373 EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLA 432
Query: 244 QNGF 247
QN F
Sbjct: 433 QNPF 436
Score = 122 (48.0 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 45/186 (24%), Positives = 81/186 (43%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHV---DL 75
P++ S + + L ++P + + +RL L+ N I + + L+H+ L
Sbjct: 29 PAQCSCSGSTVDCHGLALRIVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRILQL 86
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
I G F ++L L+LN N + FP+ + R+++ +N+I I +
Sbjct: 87 MENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDL-SENQIQAIPRK 145
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F G ++ L LD NQ+ + +F L L L + N T L+ +FN + +L
Sbjct: 146 AFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFR 205
Query: 194 LRGAGL 199
L L
Sbjct: 206 LHSNNL 211
Score = 96 (38.9 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP++ +I + L N I+ + A Y L+ +DLS+ + F+ L
Sbjct: 295 LTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSL 354
Query: 95 VELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L L NK P+ + + S + + + N+I+ + F+ L L +L L DN+L+
Sbjct: 355 NSLVLYGNKITELPKSLFEGLFSLQLL-LLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 413
Query: 153 SVPTPSFIYLGMLAELRVGLNVF 175
+V +F L + + + N F
Sbjct: 414 TVAKGTFSALRAIQTMHLAQNPF 436
Score = 74 (31.1 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 23/110 (20%), Positives = 44/110 (40%)
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 297
E L++ N + + F GL +L+ L++ + ++ + +GAF D
Sbjct: 58 ERLDLNGNNITRITKTDFAGLRHLRILQLM-ENKISTIERGAFHDLKELERLRLNRNNLQ 116
Query: 298 XXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAENPIEC 346
E +G LY L+L EN + +++ + + N I C
Sbjct: 117 L-FPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISC 165
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 308 (113.5 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 102/363 (28%), Positives = 157/363 (43%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRI-KTVDSAIPIYLSLQHVDLSHTTWLIIPIGG 87
CN + L IP + + Q L+L +N I KTVD ++ +L +D S + I G
Sbjct: 58 CN--DLRLTRIPGNLSSDTQVLLLQSNNIAKTVDELQQLF-NLTELDFSQNNFTNIKEVG 114
Query: 88 FEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF-GQNRISRIDQACFEGLTALRILYL 146
+L L L N+ C E++ N+IS I F GL L L+L
Sbjct: 115 LANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISSISANAFSGLKNLLRLHL 174
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
+ N+L+ + + F L L +G N + D F L L +L L G LT+I NA
Sbjct: 175 NSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTDIPGNA 234
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
GL L SL DN+L +P L K+ L+ L++ +N ++ G FK + LK L I
Sbjct: 235 LVGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGI 294
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS-FS 325
L V + A + I A +P L L L NA + +
Sbjct: 295 NNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQ 354
Query: 326 ESMLAWPELRTIDIAENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYKSLISLS 382
+++ + P LR I I NP+ C C I W+ + +R ++FC P + + + +
Sbjct: 355 KTVESLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEPLSMFCAMPPEYRGQQVKEVL 414
Query: 383 AED 385
+D
Sbjct: 415 IQD 417
Score = 194 (73.4 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 58/211 (27%), Positives = 94/211 (44%)
Query: 373 LKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
+ ++ L +L + L AG LT+I NA GL L SL DN+L +P L K+ L+
Sbjct: 209 MNFRPLSNLRS--LVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLK 266
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 492
L++ +N ++ G FK + LK L I L V + A +
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLS 326
Query: 493 IIEEDALVGLPNLYHLNLKENAFTS-FSESMLAWPELRTIDIAENPIECGCNILWLR--E 549
I A +P L L L NA + + +++ + P LR I I NP+ C C I W+ +
Sbjct: 327 YIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIHWINSNK 386
Query: 550 MLVR-RNTSAVFCNSPAPLKYKSLISLSAED 579
+R ++FC P + + + + +D
Sbjct: 387 TNIRFMEPLSMFCAMPPEYRGQQVKEVLIQD 417
>MGI|MGI:106038 [details] [associations]
symbol:Lrrn1 "leucine rich repeat protein 1, neuronal"
species:10090 "Mus musculus" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
MGI:MGI:106038 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:D45913 EMBL:AK173186 EMBL:AK139355
EMBL:AK139965 EMBL:AK160841 EMBL:BC031122 EMBL:BC058701
IPI:IPI00126070 RefSeq:NP_032542.1 UniGene:Mm.428543
UniGene:Mm.488119 ProteinModelPortal:Q61809 SMR:Q61809
STRING:Q61809 PaxDb:Q61809 PRIDE:Q61809 Ensembl:ENSMUST00000049285
GeneID:16979 KEGG:mmu:16979 UCSC:uc009ddd.1 InParanoid:Q61809
ChiTaRS:LRRN1 NextBio:291056 Bgee:Q61809 CleanEx:MM_LRRN1
Genevestigator:Q61809 GermOnline:ENSMUSG00000034648 Uniprot:Q61809
Length = 716
Score = 307 (113.1 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 101/363 (27%), Positives = 157/363 (43%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRI-KTVDSAIPIYLSLQHVDLSHTTWLIIPIGG 87
CN + L IP + + Q L+L +N I KTVD ++ +L +D S + I G
Sbjct: 58 CN--DLRLTRIPGNLSSDTQVLLLQSNNIAKTVDELQQLF-NLTELDFSQNNFTNIKEVG 114
Query: 88 FEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF-GQNRISRIDQACFEGLTALRILYL 146
+L L L N+ C E++ N+IS I F GL L L+L
Sbjct: 115 LANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHL 174
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
+ N+L+ + + F L L +G N + D F L L +L L G LT++ NA
Sbjct: 175 NSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFRPLSNLRSLVLAGMYLTDVPGNA 234
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
GL L SL DN+L +P L K+ L+ L++ +N ++ G FK + LK L I
Sbjct: 235 LVGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGI 294
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS-FS 325
L V + A + I A +P L L L NA + +
Sbjct: 295 NNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQ 354
Query: 326 ESMLAWPELRTIDIAENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYKSLISLS 382
+++ + P LR I I NP+ C C I W+ + +R ++FC P + + + +
Sbjct: 355 KTVESLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEPLSMFCAMPPEYRGQQVKEVL 414
Query: 383 AED 385
+D
Sbjct: 415 IQD 417
Score = 193 (73.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 57/211 (27%), Positives = 94/211 (44%)
Query: 373 LKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
+ ++ L +L + L AG LT++ NA GL L SL DN+L +P L K+ L+
Sbjct: 209 MNFRPLSNLRS--LVLAGMYLTDVPGNALVGLDSLESLSFYDNKLIKVPQLALQKVPNLK 266
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 492
L++ +N ++ G FK + LK L I L V + A +
Sbjct: 267 FLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLS 326
Query: 493 IIEEDALVGLPNLYHLNLKENAFTS-FSESMLAWPELRTIDIAENPIECGCNILWLR--E 549
I A +P L L L NA + + +++ + P LR I I NP+ C C I W+ +
Sbjct: 327 YIHRLAFRSVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIHWINSNK 386
Query: 550 MLVR-RNTSAVFCNSPAPLKYKSLISLSAED 579
+R ++FC P + + + + +D
Sbjct: 387 TNIRFMEPLSMFCAMPPEYRGQQVKEVLIQD 417
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 306 (112.8 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 97/370 (26%), Positives = 160/370 (43%)
Query: 23 STRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLI 82
ST D CN + L P+ Q L+L TN I ++ + ++L +DLS
Sbjct: 51 STVD--CN--DLGLLNFPARLPADTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSS 106
Query: 83 IPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
+ + +L+ + L NK P++ + + + + + + N +S I F GL
Sbjct: 107 VTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYV-NHNLLSTISPGAFIGLHN 165
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
L L+L+ N+L+ + + F L L L +G N + D F L +L +L + G LT
Sbjct: 166 LLRLHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIAGINLT 225
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 260
I D+A GL L S+ DNRL +P L K L+ L++ +N + + G F + +
Sbjct: 226 EIPDDALAGLENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLH 285
Query: 261 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENA 320
LK L I L + A + I A LP L L L NA
Sbjct: 286 LKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNTNA 345
Query: 321 FTSFSESML-AWPELRTIDIAENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYK 376
++ + + P L+ I I NPI C C I W+ + +R ++FC P + +
Sbjct: 346 LSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQ 405
Query: 377 SLISLSAEDL 386
++ + D+
Sbjct: 406 NVRQVHFRDM 415
Score = 220 (82.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 73/289 (25%), Positives = 120/289 (41%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+ E L GL NL L + N ++ S + + L + + N ++ N W + L
Sbjct: 131 LPEKCLYGLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQM-INSQWF-DALP 188
Query: 359 RRNTSAVFCNSPAPLK---YKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
+ N +K ++ L+ L + L AG LT I D+A GL L S+ DN
Sbjct: 189 NLEILMLGDNPIIRIKDMNFQPLVKLRS--LVIAGINLTEIPDDALAGLENLESISFYDN 246
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
RL +P L K L+ L++ +N + + G F + +LK L I L + A
Sbjct: 247 RLSKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVD 306
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIA 534
+ I +A LP L L L NA ++ + + P L+ I I
Sbjct: 307 NLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNTNALSALYHGTIESLPNLKEISIH 366
Query: 535 ENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDL 580
NPI C C I W+ + +R ++FC P + +++ + D+
Sbjct: 367 SNPIRCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDM 415
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 304 (112.1 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 96/370 (25%), Positives = 160/370 (43%)
Query: 23 STRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLI 82
ST D CN + L P+ Q L+L TN I ++ + ++L +DLS
Sbjct: 51 STVD--CN--DLGLLNFPARLPADTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSS 106
Query: 83 IPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
+ + +L+ + L NK P++ + + + + + + N +S I F GL
Sbjct: 107 VTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYV-NHNLLSAISPGAFVGLHN 165
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
L L+L+ N+L+ + + F L L L +G N + D F L +L +L + G LT
Sbjct: 166 LLRLHLNSNRLQMINSKWFEALPNLEILMLGDNPILRIKDMNFQPLLKLRSLVIAGINLT 225
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 260
+ D+A GL L S+ DNRL +P L K L+ L++ +N + + G F + +
Sbjct: 226 EVPDDALVGLENLESISFYDNRLNKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLH 285
Query: 261 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENA 320
LK L I L + A + I A LP L L L NA
Sbjct: 286 LKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNA 345
Query: 321 FTSFSESML-AWPELRTIDIAENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYK 376
++ + + P L+ I I NPI C C I W+ + +R ++FC P + +
Sbjct: 346 LSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQ 405
Query: 377 SLISLSAEDL 386
++ + D+
Sbjct: 406 NVRQVHFRDM 415
Score = 219 (82.2 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 71/289 (24%), Positives = 116/289 (40%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+ E L GL NL L + N ++ S + + L + + N ++ N W +
Sbjct: 131 LPEKCLYGLSNLQELYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQM-INSKWFEAL-- 187
Query: 359 RRNTSAVFCNSPAPLKYKSLIS---LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
N + L+ K + L L AG LT + D+A GL L S+ DN
Sbjct: 188 -PNLEILMLGDNPILRIKDMNFQPLLKLRSLVIAGINLTEVPDDALVGLENLESISFYDN 246
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
RL +P L K L+ L++ +N + + G F + +LK L I L + A
Sbjct: 247 RLNKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVD 306
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIA 534
+ I +A LP L L L NA ++ + + P L+ I I
Sbjct: 307 NLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKEISIH 366
Query: 535 ENPIECGCNILWLR--EMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDL 580
NPI C C I W+ + +R ++FC P + +++ + D+
Sbjct: 367 SNPIRCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDM 415
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 217 (81.4 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 76/307 (24%), Positives = 127/307 (41%)
Query: 87 GFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQN-RISRIDQACFEGLTALRILY 145
GF +L++L+ NH P+ + V + Q+ I+ ++ GL L LY
Sbjct: 422 GFPSDTQLLDLRRNHFPSVPRAAFPGL--GHLVSLHLQHCGIAELEAGALAGLGRLIYLY 479
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L DNQL + + L L + N F + A L L +L L+ + ++
Sbjct: 480 LSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPG 539
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
LR + L+ NR+ + L LE+L + +N + G +GL L L+
Sbjct: 540 DLGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQ 599
Query: 266 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL-PNLYHLNLKENAFTSF 324
++G + L +R GAF I GA GL P L L+L++N +
Sbjct: 600 LSG-NPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRAL 658
Query: 325 SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA-VFCNSPAPLKYKSLISLSA 383
++ + +L ID++ NP C C +L L L N C +P + + + + +A
Sbjct: 659 P-ALPSLSQLELIDLSSNPFHCDCQLLPLHRWLTGLNLRVGATCATPPNARGQRVKAAAA 717
Query: 384 EDLGCAG 390
C G
Sbjct: 718 VFEDCPG 724
Score = 213 (80.0 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 80/286 (27%), Positives = 117/286 (40%)
Query: 127 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 186
+ + + F GL L +L L N LR +P + LG L L + N L G F L
Sbjct: 98 VELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGAL 157
Query: 187 GRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 246
G L+ L+L L + AF+GL +R L L+ N L + + L+ L L L + N
Sbjct: 158 GALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNE 217
Query: 247 FSMLEAGCFKGLSYLKRLEITGASNLTRV-RKGAFADXXXXXXXXXXXXXXXXXIEEGAL 305
L L RLE+ G + LT + A + A
Sbjct: 218 LQALPGPVLSQARGLARLEL-GHNPLTYAGEEDGLA--LPGLRELLLDGGALQALGPRAF 274
Query: 306 VGLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAENPIECGCNILWLREMLVR-RNTS 363
P L+ L+L+ N + L P +LR + + NP+ CGC L E L R R S
Sbjct: 275 AHCPRLHTLDLRGNQLDTLPP--LQGPGQLRRLRLQGNPLWCGCQARPLLEWLARARVRS 332
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRS 409
C P L+ ++L +L DL C G + R ++G R+
Sbjct: 333 DGACQGPRRLRGEALDALRPWDLRCPGDAAQEEEELEERAVAGPRA 378
Score = 180 (68.4 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 70/225 (31%), Positives = 100/225 (44%)
Query: 60 VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
V AIP L+ Q +DL +IP F+ L L L H + + +
Sbjct: 56 VPDAIP-ELT-QRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLL 113
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
+ N + + Q +GL +LR L L+ N L + +F LG LA L + N L
Sbjct: 114 LLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYL 173
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
AF GL R+ L L L+ ++ A GL LR L L N LQ++P LS+ L
Sbjct: 174 PAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLSQARGLA 233
Query: 239 ELEIGQNGFSMLEAGCFKGLSY--LKRLEITGASNLTRVRKGAFA 281
LE+G N + AG GL+ L+ L + G + L + AFA
Sbjct: 234 RLELGHNPLTY--AGEEDGLALPGLRELLLDGGA-LQALGPRAFA 275
Score = 172 (65.6 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 72/249 (28%), Positives = 100/249 (40%)
Query: 23 STRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSA-IPIYLSLQHVDLSHTTWL 81
S R +C Q NL +P QRL L N +K + +A L H+DL H
Sbjct: 42 SRRHVACRYQ--NLTEVPDAIPELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVE 99
Query: 82 IIPIGGFEPQEKLVELQL--NHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLT 139
++ G F +L+ L L NH + PQ+ + + S RR+E+ G N + + F L
Sbjct: 100 LVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEG-NALEELRPGTFGALG 158
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
AL L L N L +P +F L + LR+ N + LA A GL L L L L
Sbjct: 159 ALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNEL 218
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
+ GL L L N L + L L EL + L F
Sbjct: 219 QALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCP 278
Query: 260 YLKRLEITG 268
L L++ G
Sbjct: 279 RLHTLDLRG 287
Score = 151 (58.2 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 60/215 (27%), Positives = 89/215 (41%)
Query: 71 QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF-GQNRISR 129
Q +DL + +P F LV L L H + R + ++ N+++
Sbjct: 428 QLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAG 487
Query: 130 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 189
+ A EG L LYL+ N+ VP + L L L + N LA G LGR
Sbjct: 488 LSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPG---DLGRT 544
Query: 190 SALD---LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 246
AL L G +T +S A L L L N+L+ +PT L L L EL++ N
Sbjct: 545 RALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNP 604
Query: 247 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L G F+ + + +S L ++ GAF+
Sbjct: 605 LRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFS 639
Score = 139 (54.0 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 43/160 (26%), Positives = 69/160 (43%)
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
LR + L+ NR+ + L LE+L + +N + G +GL L L+++G + L
Sbjct: 547 LRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSG-NPL 605
Query: 467 TRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGL-PNLYHLNLKENAFTSFSESMLAW 525
+R GAF I A GL P L L+L++N + ++ +
Sbjct: 606 RALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALP-ALPSL 664
Query: 526 PELRTIDIAENPIECGCNILWLREMLVRRNTSA-VFCNSP 564
+L ID++ NP C C +L L L N C +P
Sbjct: 665 SQLELIDLSSNPFHCDCQLLPLHRWLTGLNLRVGATCATP 704
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 47/164 (28%), Positives = 70/164 (42%)
Query: 396 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 455
+++ AFRGL L L L N L+ +P + L L L LE+ N L G F L L
Sbjct: 101 VAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGAL 160
Query: 456 KRLEITGASN-LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENA 514
L + A N L + AF ++ +AL GLP L L+L N
Sbjct: 161 ATLNL--AHNALVYLPAMAF-QGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNE 217
Query: 515 FTSFSESMLAWPE-LRTIDIAENPI-----ECGCNILWLREMLV 552
+ +L+ L +++ NP+ E G + LRE+L+
Sbjct: 218 LQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLL 261
Score = 127 (49.8 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 55/215 (25%), Positives = 93/215 (43%)
Query: 30 NLQEANLDVIPSHSNPSIQRLVL---STNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPI 85
+L+ ++++ + + RL+L ++N ++ + A+ SL+ ++L +
Sbjct: 92 DLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRP 151
Query: 86 GGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G F L L L HN + P ++ R + + N +S + GL ALR
Sbjct: 152 GTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRL-SHNALSVLAPEALAGLPALRR 210
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N+L+++P P LA L +G N T + L L L L G L +
Sbjct: 211 LSLHHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALG 270
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRL 237
AF L +L L N+L ++P Q +L RL
Sbjct: 271 PRAFAHCPRLHTLDLRGNQLDTLPPLQGPGQLRRL 305
Score = 100 (40.3 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 46/180 (25%), Positives = 76/180 (42%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENP-IEC-GCNILWLREM 356
+E GAL GL L +L L +N S + L P L + + N ++ G + L +
Sbjct: 464 LEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRALPSL 523
Query: 357 L-VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
+ +AV +P L + + +G +T +S A L L L N
Sbjct: 524 FSLHLQDNAVDRLAPGDLGRTRALRW----VYLSGNRITEVSLGALGPARELEKLHLDRN 579
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
+L+ +PT L L L EL++ N L G F+ + + +S L ++ GAF+
Sbjct: 580 QLREVPTGALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFS 639
Score = 98 (39.6 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 41/146 (28%), Positives = 62/146 (42%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL--NVFTTLADGA 182
N + + F+GL +R L L N L SV P + G+ A R+ L N L
Sbjct: 168 NALVYLPAMAFQGLLRVRWLRLSHNAL-SVLAPEAL-AGLPALRRLSLHHNELQALPGPV 225
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 242
+ L+ L+L LT + L GLR L+L LQ++ + + RL L++
Sbjct: 226 LSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDL 285
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITG 268
N L +G L+RL + G
Sbjct: 286 RGNQLDTLPP--LQGPGQLRRLRLQG 309
Score = 85 (35.0 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLS-GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 437
+ S + L +GL I AF GL GL+SL L N+L+++P L L++LE +++
Sbjct: 616 VGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALPA--LPSLSQLELIDLS 673
Query: 438 QNGF 441
N F
Sbjct: 674 SNPF 677
Score = 80 (33.2 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 40/153 (26%), Positives = 60/153 (39%)
Query: 388 CAGAGLTNISDNAFRGL-SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 446
C G GL + RG S + L L N S+P L L L + G + LEA
Sbjct: 411 CEGCGLQAVP----RGFPSDTQLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEA 466
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
G GL L L ++ + L + A + + AL LP+L+
Sbjct: 467 GALAGLGRLIYLYLSD-NQLAGLSAAAL-EGAPRLGYLYLERNRFLQVPGAALRALPSLF 524
Query: 507 HLNLKENAFTSFSESMLAWPE-LRTIDIAENPI 538
L+L++NA + L LR + ++ N I
Sbjct: 525 SLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRI 557
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 238 (88.8 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 88/361 (24%), Positives = 157/361 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D RG GLT I N ++ +R L N ++ IP S +L L++ N S L
Sbjct: 202 VDCRGKGLTEIPTNLPETITEIR---LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELA 258
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+GL L L + G + +T + K F + + A L NL
Sbjct: 259 PDAFQGLRSLNSLVLYG-NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNL 316
Query: 312 YHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCN 368
L+L +N + ++ A ++T+ +A+NP C C++ WL + L TS C
Sbjct: 317 NLLSLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCT 376
Query: 369 SPAPLKYKSLISLSAEDLGCAGAG--LTNISDNAFRGLS---GLR----SLVLTDNRLQS 419
SP L K + + ++ C+G + +S + F L+ R ++ ++ +L
Sbjct: 377 SPRRLANKRIGQIKSKKFRCSGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNK 436
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
IP + + T EL + N F++LEA G FK L L+++ ++ + +T + +GAF +
Sbjct: 437 IPD-HIPQYTA--ELRLNNNEFTVLEATGIFKKLPQLRKINLSN-NKITDIEEGAF-EGA 491
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAWPELRTIDIAENP 537
++ GL +L L L+ N + ++S +R + + +N
Sbjct: 492 SGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQ 551
Query: 538 I 538
I
Sbjct: 552 I 552
Score = 169 (64.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 52/188 (27%), Positives = 81/188 (43%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
C G GLT I N ++ +R L N ++ IP S +L L++ N S L
Sbjct: 204 CRGKGLTEIPTNLPETITEIR---LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPD 260
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
F+GL L L + G + +T + K F + + DA L NL
Sbjct: 261 AFQGLRSLNSLVLYG-NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 318
Query: 508 LNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSP 564
L+L +N + ++ A ++T+ +A+NP C C++ WL + L TS C SP
Sbjct: 319 LSLYDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSP 378
Query: 565 APLKYKSL 572
L K +
Sbjct: 379 RRLANKRI 386
Score = 165 (63.1 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 89/399 (22%), Positives = 154/399 (38%)
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
I AF LR L L++N++ + L L L + N + L F+GL L
Sbjct: 233 IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 292
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
+ L + A+ + +R AF D + +G L + ++L +N F
Sbjct: 293 QLL-LLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT-VAKGTFSALRAIQTMHLAQNPF 350
Query: 322 TSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRN---TSAVF-CNSPAPLKYK 376
+ L W L + NPIE G R + +R S F C+ + K
Sbjct: 351 --ICDCHLKW--LADY-LHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGTEDYRSK 405
Query: 377 ----SLISLSAED--------LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TK 423
L+ + + C+ L I D+ + + LR L +N + T
Sbjct: 406 LSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELR---LNNNEFTVLEATG 462
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
KL +L ++ + N + +E G F+G S + + +T ++ L V+ F
Sbjct: 463 IFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLT-SNRLENVQHKMFKGLESLKTL 521
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGC 542
+ D+ GL ++ L+L +N T+ + L T+++ NP C C
Sbjct: 522 MLRSNRIS-CVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFNCNC 580
Query: 543 NILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
++ WL E L R+ T C P LK + ++ +D
Sbjct: 581 HLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 619
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 62/265 (23%), Positives = 114/265 (43%)
Query: 220 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 279
+N++ +I L LE L + +N + F G + L RL+++ + + + + A
Sbjct: 2 ENKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLS-ENQIQAIPRKA 60
Query: 280 FADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTID 338
F IE+GA L +L L L N T S S P+LRT
Sbjct: 61 FRGAVDIKNLQLDYNQISC-IEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFR 119
Query: 339 IAENPIECGCNILWLREMLVRRNTSAVF--CNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
+ N + C C++ WL + L +R ++ C P+ L+ ++ + + C+G ++
Sbjct: 120 LHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVCSGPEKSHQ 179
Query: 397 SDNAFRGLSGLRS-LVLT-DNRLQSIPTKQLSKL-TRLEE----LEIGQNGFSMLEAGCF 449
S A S L + T N + K L+++ T L E + + QN ++ G F
Sbjct: 180 SFMA-PSCSVLHCPIACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIRVIPPGAF 238
Query: 450 KGLSYLKRLEITGASNLTRVRKGAF 474
L+RL+++ + ++ + AF
Sbjct: 239 SPYKKLRRLDLSN-NQISELAPDAF 262
Score = 161 (61.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 166 AELRVGLNVFTTL-ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
AELR+ N FT L A G F L +L ++L +T+I + AF G SG+ ++LT NRL+
Sbjct: 446 AELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLE 505
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
++ K L L+ L + N S + F GL ++ L + + +T V GAF
Sbjct: 506 NVQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYD-NQITTVAPGAF 560
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 44/163 (26%), Positives = 73/163 (44%)
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
H P I C+ S V+ G+ ++ I E +T +R L+ N +R +P +F
Sbjct: 190 HCP--IACTC-SNNIVDCRGKG-LTEIPTNLPETITEIR---LEQNSIRVIPPGAFSPYK 242
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + N + LA AF GL L++L L G +T + + F GL L+ L+L N++
Sbjct: 243 KLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI 302
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ L L L + N + G F L ++ + +
Sbjct: 303 NCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHL 345
Score = 125 (49.1 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N +T+ GAF L L L L L + F G + L L L++N++Q+IP K
Sbjct: 3 NKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFR 62
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
++ L++ N S +E G F+ L L+ L + +N+TR+ +F
Sbjct: 63 GAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNN-NNITRLSVASF 109
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 39/158 (24%), Positives = 67/158 (42%)
Query: 414 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 473
+N++ +I L LE L + +N + F G + L RL+++ + + + + A
Sbjct: 2 ENKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLS-ENQIQAIPRKA 60
Query: 474 FADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTID 532
F IE+ A L +L L L N T S S P+LRT
Sbjct: 61 FRGAVDIKNLQLDYNQIS-CIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFR 119
Query: 533 IAENPIECGCNILWLREMLVRRNTSAVF--CNSPAPLK 568
+ N + C C++ WL + L +R ++ C P+ L+
Sbjct: 120 LHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLR 157
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I I F LR L L +NQ+ + +F L L L + N T L F
Sbjct: 227 QNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLF 286
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L L + + +AF+ L L L L DN+LQ++ S L ++ + +
Sbjct: 287 EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRAIQTMHLA 346
Query: 244 QNGF 247
QN F
Sbjct: 347 QNPF 350
Score = 118 (46.6 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 33/122 (27%), Positives = 53/122 (43%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+IS I++ F+ L L L L+ N L+ P F+ L L + N + AF
Sbjct: 2 ENKISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAF 61
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
G + L L ++ I D AFR L L L L +N + + + + +L +
Sbjct: 62 RGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLH 121
Query: 244 QN 245
N
Sbjct: 122 SN 123
Score = 117 (46.2 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 144 LYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L++N+ + T F L L ++ + N T + +GAF G ++ + L L N+
Sbjct: 448 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENV 507
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
F+GL L++L+L NR+ + + L + L + N + + G F L L
Sbjct: 508 QHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLS 567
Query: 263 RLEI 266
L +
Sbjct: 568 TLNL 571
Score = 108 (43.1 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N + + F G L L L +NQ++++P +F + L++ N + + DGAF
Sbjct: 26 RNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAF 85
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L +T +S +F + LR+ L N L
Sbjct: 86 RALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 125
Score = 107 (42.7 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 32/116 (27%), Positives = 55/116 (47%)
Query: 86 GGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G F+ ++L L+LN N + FP+ + R+++ +N+I I + F G ++
Sbjct: 11 GAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDL-SENQIQAIPRKAFRGAVDIKN 69
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
L LD NQ+ + +F L L L + N T L+ +FN + +L L L
Sbjct: 70 LQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 125
Score = 101 (40.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F+ L LR + L +N++ + +F + E+ + N + F GL L L L
Sbjct: 464 FKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 523
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248
R ++ + +++F GL +R L L DN++ ++ L L L + N F+
Sbjct: 524 RSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNLLANPFN 577
Score = 96 (38.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP++ +I + L N I+ + A Y L+ +DLS+ + F+ L
Sbjct: 209 LTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSL 268
Query: 95 VELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L L NK P+ + + S + + + N+I+ + F+ L L +L L DN+L+
Sbjct: 269 NSLVLYGNKITELPKSLFEGLFSLQLL-LLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 327
Query: 153 SVPTPSFIYLGMLAELRVGLNVF 175
+V +F L + + + N F
Sbjct: 328 TVAKGTFSALRAIQTMHLAQNPF 350
Score = 69 (29.3 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
++RL L+ N ++ + + + L +DLS IP F + LQL++N
Sbjct: 19 LERLRLNRNNLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYN--- 75
Query: 106 PQQIVC----SIISPRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQL 151
QI C + + R +E+ N I+R+ A F + LR L N L
Sbjct: 76 --QISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNL 125
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 232 (86.7 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 91/362 (25%), Positives = 152/362 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D R GLT I N G+ +R L N +++IP S +L+ +++ +N S +
Sbjct: 283 VDCRRKGLTEIPANLPEGIVEIR---LEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIA 339
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L L + G + + + KG F D + L NL
Sbjct: 340 EDAFSGLRSLTSLVLYG-NKIAEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFKDLQNL 397
Query: 312 YHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFC 367
L+L +N + S+ + A P ++T+ +A+NP C C++ WL + L TS C
Sbjct: 398 NLLSLYDNKLQTISKGLFA-PLRAIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARC 456
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAG--LTNISDNAFRGL---SGLR---SLVLTDN-RLQ 418
+ P L K + + + C GA + +S F+ L R ++V N +L
Sbjct: 457 SHPRRLANKRISQVKGKKFRCTGAEDYRSRLSGECFQDLVCPERCRCEGTVVDCSNLKLT 516
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADX 477
IP L + T +L + N S+LEA G FK L L+++ ++ + L +R+GAF D
Sbjct: 517 KIPP-HLPEHTT--DLRLNDNEISILEATGAFKKLPNLRKINLSN-NKLRDIREGAF-DG 571
Query: 478 XXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAEN 536
+ GL L L L+ N + + +R + + +N
Sbjct: 572 AGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDN 631
Query: 537 PI 538
I
Sbjct: 632 RI 633
Score = 203 (76.5 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 71/292 (24%), Positives = 129/292 (44%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL +T I+ F GL LR L L +N++ I L +LE + + +N +L
Sbjct: 57 LDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLP 116
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ + L RL+++ + + V + AF IE+GA L +L
Sbjct: 117 ELLFQSTTKLSRLDLS-ENQIQAVPRKAFRGITTVKNLQLDSNHISC-IEDGAFRALRDL 174
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T S P+LRT+ + N + C C++ WL + L +R A F C
Sbjct: 175 EILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFTQCM 234
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
+PA ++ ++ + + C G T A + ++ + +N + K L+++
Sbjct: 235 APAHMRGLNVPDVQKREFVCTGPVETEPRSCAPQ-VTICPAACTCNNNIVDCRRKGLTEI 293
Query: 429 TR-----LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
+ E+ + QN + AG F LKR++++ + ++ + + AF+
Sbjct: 294 PANLPEGIVEIRLEQNMIKNIPAGAFSTYKKLKRIDLS-KNQISEIAEDAFS 344
Score = 171 (65.3 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 50/189 (26%), Positives = 83/189 (43%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
C GLT I N G+ +R L N +++IP S +L+ +++ +N S +
Sbjct: 285 CRRKGLTEIPANLPEGIVEIR---LEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAED 341
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
F GL L L + G + + + KG F D + + L NL
Sbjct: 342 AFSGLRSLTSLVLYG-NKIAEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFKDLQNLNL 399
Query: 508 LNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNS 563
L+L +N + S+ + A P ++T+ +A+NP C C++ WL + L TS C+
Sbjct: 400 LSLYDNKLQTISKGLFA-PLRAIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSH 458
Query: 564 PAPLKYKSL 572
P L K +
Sbjct: 459 PRRLANKRI 467
Score = 169 (64.5 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 116 PRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
PR E +N I+RI + F GL LR+L+L++NQ+ + +F L L +R+ N
Sbjct: 51 PRNAERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRN 110
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L + F +LS LDL + + AFRG++ +++L L N + I
Sbjct: 111 RLQVLPELLFQSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRA 170
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L LE L + N +++ F + L+ L + ++NL
Sbjct: 171 LRDLEILTLNNNNITLIPLSSFNHMPKLRTLRLH-SNNL 208
Score = 164 (62.8 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 89/398 (22%), Positives = 151/398 (37%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFS 248
+ +D LT I + + LR L DN + + T KL L ++ + N
Sbjct: 506 TVVDCSNLKLTKIPPHLPEHTTDLR---LNDNEISILEATGAFKKLPNLRKINLSNNKLR 562
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+ G F G + L +TG + L V G ++ GL
Sbjct: 563 DIREGAFDGAGGVLELLLTG-NKLQSV-SGRMFKGLIGLKTLMLRSNQISCVDNATFTGL 620
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVR-RNTSA-V 365
++ L+L +N ++ + L TI++ NP C C++ WL L + R S
Sbjct: 621 SSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCDCHLAWLGLWLKKTRVVSGNP 680
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR---GLSGLRSLVLTDNR-LQSIP 421
C PA LK + ++ D C GA +A R + ++V NR L+S+P
Sbjct: 681 RCQKPAFLKEIPIQDVAMPDFSCDGAEENVCLPSAPRCPESCTCSETVVRCSNRGLRSLP 740
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN--LTRVRKGAFADXXX 479
K + K T EL + N + + K L LK+L + SN ++ + F++
Sbjct: 741 -KTIPKDTT--ELYLEGNLLTSVP----KELPNLKQLTLLDLSNNSISHLAPLTFSNMTQ 793
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPI 538
+ A GL +L L L N ++ E L + + NP+
Sbjct: 794 LATLILSYNQIR-CVPVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLALGANPL 852
Query: 539 ECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLIS 574
C C + WL + + + C P + + L++
Sbjct: 853 YCDCELRWLSQWVKAGFKEPGIARCTGPPDMADRLLLT 890
Score = 164 (62.8 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 57/209 (27%), Positives = 89/209 (42%)
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
S V C A I +AE L +T I+ F GL LR L L +N++ I
Sbjct: 34 SHVDCQGQAFKTVPRGIPRNAERLDLDRNNITRITKVDFSGLKNLRVLHLENNQISVIER 93
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
L +LE + + +N +L F+ + L RL+++ + + V + AF
Sbjct: 94 GAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDLS-ENQIQAVPRKAFRGITTVKN 152
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECG 541
IE+ A L +L L L N T S P+LRT+ + N + C
Sbjct: 153 LQLDSNHIS-CIEDGAFRALRDLEILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCD 211
Query: 542 CNILWLREMLVRRNTSAVF--CNSPAPLK 568
C++ WL + L +R A F C +PA ++
Sbjct: 212 CHLSWLSDWLRQRRGLAPFTQCMAPAHMR 240
Score = 150 (57.9 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 93/392 (23%), Positives = 147/392 (37%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
+ NI AF L+ + L+ N++ I S L L L + N + + G F GL
Sbjct: 311 IKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGL 370
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
L+ L + A+ + +R F D I +G L + L+L +
Sbjct: 371 VSLQLL-LLNANKINCLRVNTFKDLQNLNLLSLYDNKLQT-ISKGLFAPLRAIKTLHLAQ 428
Query: 319 NAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNTSAV---FCNSPAPLK 374
N F + L W L + +NPIE G R + +R + F + A
Sbjct: 429 NPF--MCDCHLKW--LADY-LFDNPIETSGARCSHPRRLANKRISQVKGKKFRCTGAE-D 482
Query: 375 YKSLISLSA-EDL---------G----CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
Y+S +S +DL G C+ LT I + + LR L DN + +
Sbjct: 483 YRSRLSGECFQDLVCPERCRCEGTVVDCSNLKLTKIPPHLPEHTTDLR---LNDNEISIL 539
Query: 421 P-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 479
T KL L ++ + N + G F G + L +TG + L V G
Sbjct: 540 EATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTG-NKLQSV-SGRMFKGLI 597
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPI 538
++ GL ++ L+L +N ++ + L TI++ NP
Sbjct: 598 GLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPY 657
Query: 539 ECGCNILWLREMLVR-RNTSA-VFCNSPAPLK 568
C C++ WL L + R S C PA LK
Sbjct: 658 VCDCHLAWLGLWLKKTRVVSGNPRCQKPAFLK 689
Score = 144 (55.7 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ N+ + GAF+ +L +DL ++ I+++AF GL L SLVL N++
Sbjct: 301 IVEIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIA 360
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
IP L L+ L + N + L FK L L L + + L + KG FA
Sbjct: 361 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYD-NKLQTISKGLFA 416
Score = 138 (53.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 39/142 (27%), Positives = 71/142 (50%)
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFN 184
++++I E T LR L+DN++ + T +F L L ++ + N + +GAF+
Sbjct: 514 KLTKIPPHLPEHTTDLR---LNDNEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFD 570
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
G G + L L G L ++S F+GL GL++L+L N++ + + L+ + L +
Sbjct: 571 GAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYD 630
Query: 245 NGFSMLEAGCFKGLSYLKRLEI 266
N S + G F L L + +
Sbjct: 631 NRISTIAPGAFNTLHSLSTINL 652
Score = 137 (53.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 41/163 (25%), Positives = 70/163 (42%)
Query: 106 PQQIVCSIISPRRVEIFGQNR--ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
PQ +C I R ++ I EG+ +R L+ N ++++P +F
Sbjct: 267 PQVTICPAACTCNNNIVDCRRKGLTEIPANLPEGIVEIR---LEQNMIKNIPAGAFSTYK 323
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L + + N + +A+ AF+GL L++L L G + I F GL L+ L+L N++
Sbjct: 324 KLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLNANKI 383
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ L L L + N + G F L +K L +
Sbjct: 384 NCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHL 426
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 40/130 (30%), Positives = 57/130 (43%)
Query: 119 VEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
VEI QN I I F L+ + L NQ+ + +F L L L + N
Sbjct: 302 VEIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAE 361
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ G F+GL L L L + + N F+ L L L L DN+LQ+I + L +
Sbjct: 362 IPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAI 421
Query: 238 EELEIGQNGF 247
+ L + QN F
Sbjct: 422 KTLHLAQNPF 431
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 45/157 (28%), Positives = 75/157 (47%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ L LR + L +N+LR + +F G + EL + N +++ F
Sbjct: 534 NEISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMF 593
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ + + F GLS +R L L DNR+ +I + L L + +
Sbjct: 594 KGLIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLL 653
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N + + GL +LK+ + + R +K AF
Sbjct: 654 SNPYVCDCHLAWLGL-WLKKTRVVSGN--PRCQKPAF 687
Score = 124 (48.7 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 46/186 (24%), Positives = 83/186 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTN---RIKTVDSAIPIYLSLQHVDL 75
P + S + Q +P + +RL L N RI VD + L + H++
Sbjct: 26 PHKCSCSGSHVDCQGQAFKTVPRGIPRNAERLDLDRNNITRITKVDFSGLKNLRVLHLEN 85
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQA 133
+ + +I G FE ++L ++LN N+ P+ + S R+++ +N+I + +
Sbjct: 86 NQIS--VIERGAFEGLKQLERIRLNRNRLQVLPELLFQSTTKLSRLDL-SENQIQAVPRK 142
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F G+T ++ L LD N + + +F L L L + N T + +FN + +L L
Sbjct: 143 AFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLNNNNITLIPLSSFNHMPKLRTLR 202
Query: 194 LRGAGL 199
L L
Sbjct: 203 LHSNNL 208
Score = 110 (43.8 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 46/188 (24%), Positives = 82/188 (43%)
Query: 4 DAGQELRSKCMNPYE-PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS 62
D L +C P R + L IP H L L+ N I +++
Sbjct: 482 DYRSRLSGECFQDLVCPERCRCEGTVVDCSNLKLTKIPPHLPEHTTDLRLNDNEISILEA 541
Query: 63 --AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRR 118
A +L+ ++LS+ I G F+ ++EL L NK ++ +I +
Sbjct: 542 TGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKT 601
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
+ + N+IS +D A F GL+++R+L L DN++ ++ +F L L+ + + N +
Sbjct: 602 L-MLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCD 660
Query: 179 ADGAFNGL 186
A+ GL
Sbjct: 661 CHLAWLGL 668
Score = 104 (41.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 31/114 (27%), Positives = 56/114 (49%)
Query: 83 IPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
IP G F +KL + L+ N+ + + S + ++G N+I+ I + F+GL +
Sbjct: 314 IPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYG-NKIAEIPKGLFDGLVS 372
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
L++L L+ N++ + +F L L L + N T++ G F L + L L
Sbjct: 373 LQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHL 426
Score = 103 (41.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 39/160 (24%), Positives = 69/160 (43%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSH 77
P+ + + + + L IP++ I + L N IK + + A Y L+ +DLS
Sbjct: 273 PAACTCNNNIVDCRRKGLTEIPANLPEGIVEIRLEQNMIKNIPAGAFSTYKKLKRIDLSK 332
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I F L L L NK P+ + ++S + + + N+I+ + F
Sbjct: 333 NQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLL-LLNANKINCLRVNTF 391
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ L L +L L DN+L+++ F L + L + N F
Sbjct: 392 KDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQNPF 431
Score = 96 (38.9 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 167 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 226
EL + N+ T++ N L +L+ LDL +++++ F ++ L +L+L+ N+++ +
Sbjct: 749 ELYLEGNLLTSVPKELPN-LKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCV 807
Query: 227 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
P L L L + N S + G F L+ L L + GA+ L
Sbjct: 808 PVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHLTSLSHLAL-GANPL 852
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 295 (108.9 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 118/440 (26%), Positives = 185/440 (42%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + F AL L L +N+L + F LG L +L +G N L D AF
Sbjct: 131 RNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAF 190
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GLG L L L G L + F GL+ LR L L+ N L++I +L RL++L +
Sbjct: 191 RGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLD 250
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
+N + + G F GL L+ L+++ + + + + F +
Sbjct: 251 RNLIAAVAPGAFLGLKALRWLDLSH-NRVAGLLEDTFPGLLGLRVLRLSHNAIAS-LRPR 308
Query: 304 ALVGLPNLYHLNLKENAFTSFSESM---LAWPELRTIDIAE-NPIECGCNILWLREMLVR 359
L L L L N +E L E+ T+D + ++ G L L + V
Sbjct: 309 TFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGA-FLGLTNVAVM 367
Query: 360 RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
+ N P + ++ L L + L G+ L I + F GLSGLR L L DN L
Sbjct: 368 NLSGNCLRNLPEQV-FRGLGKLHS--LHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVG 424
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 479
I + L L L EL++ N + L F+GL L+ L + + L + A
Sbjct: 425 IEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYL-LLSRNRLAELPADALGPLQR 483
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIE 539
+ L L L +L+L+ N+ +F+ P L + + NP +
Sbjct: 484 AFWLDVSHNRLEAL-PNSLLAPLGRLRYLSLRNNSLRTFTPQP---PGLERLWLEGNPWD 539
Query: 540 CGCNILWLREMLVRRNTSAV 559
CGC + LR+ ++ N SAV
Sbjct: 540 CGCPLKALRDFALQ-NPSAV 558
Score = 289 (106.8 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 97/324 (29%), Positives = 149/324 (45%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P +Q+L L N I V + L +L+ +DLSH + F L L+L+HN
Sbjct: 242 PRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNA 301
Query: 104 --HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ + +++ G NRI ++ + FEGL L +L LD NQL+ V +F+
Sbjct: 302 IASLRPRTFKDLHFLEELQL-GHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLG 360
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L +A + + N L + F GLG+L +L L G+ L I + F GLSGLR L L DN
Sbjct: 361 LTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDN 420
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L I + L L L EL++ N + L F+GL L+ L + + L + A
Sbjct: 421 GLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYL-LLSRNRLAELPADALG 479
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 341
+ L L L +L+L+ N+ +F+ P L + +
Sbjct: 480 PLQRAFWLDVSHNRLEA-LPNSLLAPLGRLRYLSLRNNSLRTFTPQP---PGLERLWLEG 535
Query: 342 NPIECGCNILWLREMLVRRNTSAV 365
NP +CGC + LR+ ++ N SAV
Sbjct: 536 NPWDCGCPLKALRDFALQ-NPSAV 558
Score = 259 (96.2 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 111/419 (26%), Positives = 167/419 (39%)
Query: 106 PQQIVCSIISPR-RVEIFGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
P VCS + +F +R ++R+ G AL +LD N L SVP +F L
Sbjct: 42 PAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQAL---WLDGNNLSSVPPAAFQNLS 98
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + +L A GL L L L L +++ F L SL L++NRL
Sbjct: 99 SLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRL 158
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADX 283
+ L L +L +G N ++L F+GL L+ L + G + L ++ F+
Sbjct: 159 SRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAG-NRLAYLQPALFSGL 217
Query: 284 XXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAEN 342
I+ V LP L L L N + + + L LR +D++ N
Sbjct: 218 AELRELDLSRNALRA-IKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHN 276
Query: 343 PI-----ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNIS 397
+ + +L LR + + N A S P +K L L E+L + ++
Sbjct: 277 RVAGLLEDTFPGLLGLRVLRLSHNAIA----SLRPRTFKDLHFL--EELQLGHNRIRQLA 330
Query: 398 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 457
+ +F GL L L L N+LQ + LT + + + N L F+GL L
Sbjct: 331 ERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHS 390
Query: 458 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFT 516
L + G S L R+R F I EE +L GL L L+L N T
Sbjct: 391 LHLEG-SCLGRIRPHTFTGLSGLRRLFLKDNGLVGI-EEQSLWGLAELLELDLTSNQLT 447
Score = 256 (95.2 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 114/420 (27%), Positives = 181/420 (43%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPI 85
NLQ L + + ++ L L N+++++ + +L + LS+ +
Sbjct: 104 NLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLED 163
Query: 86 GGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G FE L +L L N P + S R + + G NR++ + A F GL LR
Sbjct: 164 GLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAG-NRLAYLQPALFSGLAELRE 222
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N LR++ F+ L L +L + N+ +A GAF GL L LDL + +
Sbjct: 223 LDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLL 282
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL GLR L L+ N + S+ + L LEEL++G N L F+GL L+
Sbjct: 283 EDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEV 342
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
L + + L V+ GAF + E GL L+ L+L+ +
Sbjct: 343 LTLDH-NQLQEVKAGAFLGLTNVAVMNLSGNCLRN-LPEQVFRGLGKLHSLHLEGSCLGR 400
Query: 324 FS-ESMLAWPELRTIDIAENPIECGCN--ILW-LREMLVRRNTSAVFCNSPAPLKYKSLI 379
+ LR + + +N + G LW L E+L TS + P L ++ L
Sbjct: 401 IRPHTFTGLSGLRRLFLKDNGL-VGIEEQSLWGLAELLELDLTSNQLTHLPHRL-FQGLG 458
Query: 380 SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L E L + L + +A L L ++ NRL+++P L+ L RL L + N
Sbjct: 459 KL--EYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNN 516
Score = 220 (82.5 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 108/457 (23%), Positives = 176/457 (38%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N +S + A F+ L++L L L QL S+ + + L L L + N +LA G F
Sbjct: 84 NNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFA 143
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L++L L L+ + D F GL L L L N L +P L L EL +
Sbjct: 144 HTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAG 203
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + L+ F GL+ L+ L+++ + L ++ F + GA
Sbjct: 204 NRLAYLQPALFSGLAELRELDLS-RNALRAIKANVFVQLPRLQKLYLDRNLIAA-VAPGA 261
Query: 305 LVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPI-----ECGCNILWLREMLV 358
+GL L L+L N E LR + ++ N I ++ +L E+ +
Sbjct: 262 FLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQL 321
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
N A ++ L L E L L + AF GL+ + + L+ N L+
Sbjct: 322 GHNR----IRQLAERSFEGLGQL--EVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLR 375
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
++P + L +L L + + + F GLS L+RL + + L + + +
Sbjct: 376 NLPEQVFRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKD-NGLVGIEEQSLWGLA 434
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRT--IDIAEN 536
+ GL L +L L N L P R +D++ N
Sbjct: 435 ELLELDLTSNQLTHLPHR-LFQGLGKLEYLLLSRNRLAELPADALG-PLQRAFWLDVSHN 492
Query: 537 PIECGCNILW-----LREMLVRRNTSAVFCNSPAPLK 568
+E N L LR + +R N+ F P L+
Sbjct: 493 RLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQPPGLE 529
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 226 (84.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 70/291 (24%), Positives = 121/291 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+L G +T I N F GL LR L L +N++ ++ + LE L + +N ML
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLP 125
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L RL+++ + + + + AF IEEGA L L
Sbjct: 126 ELLFQNNQALSRLDLS-ENAIQAIPRKAFRGATDLKNLQLDKNQISC-IEEGAFRALRGL 183
Query: 312 YHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T+ S P+LRT + N + C C++ WL + L +R T +F C+
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCS 243
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
PA L+ ++ + + C+G G ++ N + K L+ +
Sbjct: 244 GPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAI 303
Query: 429 TR-----LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ E+ + NG + G F L+R++++ + + + AF
Sbjct: 304 PANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSN-NQIAEIAPDAF 353
Score = 225 (84.3 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 95/382 (24%), Positives = 163/382 (42%)
Query: 177 TLADGAFNGLGRLS--ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
TL+ G+ + S +D RG GLT I N ++ +R L L N ++SIP S
Sbjct: 276 TLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIR-LEL--NGIKSIPPGAFSPY 332
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 294
+L +++ N + + F+GL L L + G + +T + +G F
Sbjct: 333 RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 295 XXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWL 353
I A L NL L+L +N S ++ + + ++T+ +A+NP C CN+ WL
Sbjct: 392 KINC-IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWL 450
Query: 354 REMLVRRN---TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGL-SGLRS 409
+ L R N TS C SP L K + + ++ C+ I L S S
Sbjct: 451 ADFL-RTNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNS 509
Query: 410 LVLTDNRLQ---SIPTKQLSKLTRLEE--------LEIGQNGFSMLEA-GCFKGLSYLKR 457
V+ ++ + ++ KLT++ E L + N S+LEA G FK L++LK+
Sbjct: 510 DVVCPHKCRCEANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKK 569
Query: 458 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTS 517
+ ++ + ++ + GAF + I GL L L L+ N +
Sbjct: 570 INLSN-NKVSEIEDGAF-EGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC 627
Query: 518 F-SESMLAWPELRTIDIAENPI 538
++S +R + + +N I
Sbjct: 628 IHNDSFTGLRNVRLLSLYDNQI 649
Score = 220 (82.5 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 90/391 (23%), Positives = 162/391 (41%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKG 257
LT I + + + LR L +N + + T KLT L+++ + N S +E G F+G
Sbjct: 531 LTKIPERIPQSTAELR---LNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEG 587
Query: 258 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLK 317
+ + L +T A+ L +R G F I + GL N+ L+L
Sbjct: 588 AASVSELHLT-ANQLESIRSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGLRNVRLLSLY 645
Query: 318 ENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLK 374
+N T+ S L T+++ NP C C + WL L +R T C +P L+
Sbjct: 646 DNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLR 705
Query: 375 YKSLISLSAEDLGCAGA---GLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTR 430
L ++ D C G + + L ++V N+ L+++P K + K
Sbjct: 706 QIPLQDVAFPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLRALP-KGIPK--N 762
Query: 431 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX 490
+ EL + N F+++ G YL+ ++++ + ++ + +F +
Sbjct: 763 VTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 491 XXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLRE 549
I A GL +L L+L N ++ E + A L + I NP+ C C++ WL
Sbjct: 821 Q-CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 550 MLVR--RNTSAVFCNSPAPLKYKSLISLSAE 578
+ + C P ++ K L++ A+
Sbjct: 880 WVKTGYKEPGIARCAGPQDMEGKLLLTTPAK 910
Score = 179 (68.1 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 55/193 (28%), Positives = 84/193 (43%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I + E L G +T I N F GL LR L L +N++ ++ + LE L + +
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N ML F+ L RL+++ + + + + AF IEE A
Sbjct: 119 NQLHMLPELLFQNNQALSRLDLS-ENAIQAIPRKAFRGATDLKNLQLDKNQIS-CIEEGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L L L L N T+ S P+LRT + N + C C++ WL + L +R T
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTI 236
Query: 558 AVF--CNSPAPLK 568
+F C+ PA L+
Sbjct: 237 GLFTQCSGPASLR 249
Score = 175 (66.7 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 57/217 (26%), Positives = 91/217 (41%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQL 425
CNS +K A + C+ LT I + + + LR L +N + + T
Sbjct: 507 CNSDVVCPHKC--RCEANVVECSSLKLTKIPERIPQSTAELR---LNNNEISILEATGMF 561
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
KLT L+++ + N S +E G F+G + + L +T A+ L +R G F
Sbjct: 562 KKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT-ANQLESIRSGMFRGLDGLRTLML 620
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
I D+ GL N+ L+L +N T+ S L T+++ NP C C +
Sbjct: 621 RNNRIS-CIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQL 679
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL L +R T C +P L+ L ++ D
Sbjct: 680 AWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPD 716
Score = 174 (66.3 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 55/189 (29%), Positives = 86/189 (45%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
C G GLT I N ++ +R L L N ++SIP S +L +++ N + +
Sbjct: 295 CRGKGLTAIPANLPETMTEIR-LEL--NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPD 351
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
F+GL L L + G + +T + +G F I DA L NL
Sbjct: 352 AFQGLRSLNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNANKIN-CIRPDAFQDLQNLSL 409
Query: 508 LNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNS 563
L+L +N S ++ + + ++T+ +A+NP C CN+ WL + L R N TS C S
Sbjct: 410 LSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFL-RTNPIETSGARCAS 468
Query: 564 PAPLKYKSL 572
P L K +
Sbjct: 469 PRRLANKRI 477
Score = 157 (60.3 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 46/149 (30%), Positives = 70/149 (46%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+E+ G N I+RI + F GL LR+L L +NQ+ +V +F + L LR+ N
Sbjct: 65 RLELNGNN-ITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHM 123
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
L + F LS LDL + I AFRG + L++L L N++ I L L
Sbjct: 124 LPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
E L + N + + F + L+ +
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 144 LYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L++N++ + T F L L ++ + N + + DGAF G +S L L L +I
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
FRGL GLR+L+L +NR+ I + L + L + N + + G F L L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLS 664
Query: 263 RLEI 266
L +
Sbjct: 665 TLNL 668
Score = 134 (52.2 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I +++ F+ + L L L+ NQL +P F L+ L + N + AF
Sbjct: 94 ENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAF 153
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
G L L L ++ I + AFR L GL L L +N + +IP + + +L +
Sbjct: 154 RGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLH 213
Query: 244 QN 245
N
Sbjct: 214 SN 215
Score = 131 (51.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 39/123 (31%), Positives = 55/123 (44%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I I F LR + L +NQ+ + +F L L L + N T L G F
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L + I +AF+ L L L L DN++QS+ + L ++ L + Q
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 245 NGF 247
N F
Sbjct: 439 NPF 441
Score = 130 (50.8 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ LN ++ GAF+ +L +DL + I+ +AF+GL L SLVL N++
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+P L L+ L + N + + F+ L L L + + + + KG F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYD-NKIQSLAKGTF 425
Score = 128 (50.1 bits), Expect = 0.00029, P = 0.00029
Identities = 40/145 (27%), Positives = 69/145 (47%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ LT L+ + L +N++ + +F ++EL + N ++ G F
Sbjct: 550 NEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMF 609
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ I +++F GL +R L L DN++ ++ L L L +
Sbjct: 610 RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLL 669
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITG 268
N F+ + G KR +TG
Sbjct: 670 ANPFNCNCQLAWLGGWLRKRKIVTG 694
Score = 123 (48.4 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 37/131 (28%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T++ F GL L+ L+L N++ I L L L + N L G F
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 426 TSLRAIQTLHL 436
Score = 121 (47.7 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 44/162 (27%), Positives = 75/162 (46%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP + + +RL L+ N I + L L+ + L + G F+ ++L
Sbjct: 52 LQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKEL 111
Query: 95 VELQLNHNK-HF-PQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L+LN N+ H P+ + + + R+++ +N I I + F G T L+ L LD NQ+
Sbjct: 112 ERLRLNRNQLHMLPELLFQNNQALSRLDL-SENAIQAIPRKAFRGATDLKNLQLDKNQIS 170
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+ +F L L L + N TT+ +FN + +L L
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 117 (46.2 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L G + L +DL ++++S+++F +S L +L+L+ N LQ
Sbjct: 763 VTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L L L + N S L+ G F ++ L L I GA+ L
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAI-GANPL 868
Score = 105 (42.0 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ AL L L +N ++++P +F L L++ N + + +GAF
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L +T I ++F + LR+ L N L
Sbjct: 178 RALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 105 (42.0 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 8 ELRSKCMNPYE-PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI 66
+L S+C + P + L IP S L L+ N I ++ A +
Sbjct: 502 QLNSECNSDVVCPHKCRCEANVVECSSLKLTKIPERIPQSTAELRLNNNEISILE-ATGM 560
Query: 67 YLSLQH---VDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIF 122
+ L H ++LS+ I G FE + EL L N+ + + + R +
Sbjct: 561 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLML 620
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
NRIS I F GL +R+L L DNQ+ +V +F L L+ L + N F
Sbjct: 621 RNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPF 673
Score = 102 (41.0 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP++ ++ + L N IK++ A Y L+ +DLS+ I F+ L
Sbjct: 300 LTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Query: 95 VELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L L NK P+ + + + + + + N+I+ I F+ L L +L L DN+++
Sbjct: 360 NSLVLYGNKITDLPRGVFGGLYTLQLL-LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQ 418
Query: 153 SVPTPSFIYLGMLAELRVGLNVF 175
S+ +F L + L + N F
Sbjct: 419 SLAKGTFTSLRAIQTLHLAQNPF 441
Score = 101 (40.6 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 40/182 (21%), Positives = 79/182 (43%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ L+++P K + K + EL + N F+++ G YL+ ++++ +
Sbjct: 741 LDTVVRCSNKHLRALP-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NK 795
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA- 330
++ + +F + I A GL +L L+L N ++ E + A
Sbjct: 796 ISSLSNSSFTNMSQLTTLILSYNALQC-IPPLAFQGLRSLRLLSLHGNDISTLQEGIFAD 854
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
L + I NP+ C C++ WL + + C P ++ K L++ A+ C
Sbjct: 855 VTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFEC 914
Query: 389 AG 390
G
Sbjct: 915 QG 916
Score = 79 (32.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 31/125 (24%), Positives = 53/125 (42%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
LQ+IP K + + T E LE+ N + + F GL L+ L++ + + V +GAF D
Sbjct: 52 LQAIP-KNIPRNT--ERLELNGNNITRIHKNDFAGLKQLRVLQLM-ENQIGAVERGAF-D 106
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAE 341
+ E L L+L ENA + ++ +L+ + + +
Sbjct: 107 DMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDK 166
Query: 342 NPIEC 346
N I C
Sbjct: 167 NQISC 171
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 226 (84.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 70/291 (24%), Positives = 121/291 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+L G +T I N F GL LR L L +N++ ++ + LE L + +N ML
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLP 125
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L RL+++ + + + + AF IEEGA L L
Sbjct: 126 ELLFQNNQALSRLDLS-ENAIQAIPRKAFRGATDLKNLQLDKNQISC-IEEGAFRALRGL 183
Query: 312 YHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T+ S P+LRT + N + C C++ WL + L +R T +F C+
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCS 243
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
PA L+ ++ + + C+G G ++ N + K L+ +
Sbjct: 244 GPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAI 303
Query: 429 TR-----LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ E+ + NG + G F L+R++++ + + + AF
Sbjct: 304 PANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSN-NQIAEIAPDAF 353
Score = 225 (84.3 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 95/382 (24%), Positives = 163/382 (42%)
Query: 177 TLADGAFNGLGRLS--ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
TL+ G+ + S +D RG GLT I N ++ +R L L N ++SIP S
Sbjct: 276 TLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIR-LEL--NGIKSIPPGAFSPY 332
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 294
+L +++ N + + F+GL L L + G + +T + +G F
Sbjct: 333 RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 295 XXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWL 353
I A L NL L+L +N S ++ + + ++T+ +A+NP C CN+ WL
Sbjct: 392 KINC-IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWL 450
Query: 354 REMLVRRN---TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGL-SGLRS 409
+ L R N TS C SP L K + + ++ C+ I L S S
Sbjct: 451 ADFL-RTNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNS 509
Query: 410 LVLTDNRLQ---SIPTKQLSKLTRLEE--------LEIGQNGFSMLEA-GCFKGLSYLKR 457
V+ ++ + ++ KLT++ E L + N S+LEA G FK L++LK+
Sbjct: 510 DVVCPHKCRCEANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKK 569
Query: 458 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTS 517
+ ++ + ++ + GAF + I GL L L L+ N +
Sbjct: 570 INLSN-NKVSEIEDGAF-EGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC 627
Query: 518 F-SESMLAWPELRTIDIAENPI 538
++S +R + + +N I
Sbjct: 628 IHNDSFTGLRNVRLLSLYDNQI 649
Score = 220 (82.5 bits), Expect = 6.6e-23, Sum P(2) = 6.6e-23
Identities = 90/391 (23%), Positives = 162/391 (41%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKG 257
LT I + + + LR L +N + + T KLT L+++ + N S +E G F+G
Sbjct: 531 LTKIPERIPQSTAELR---LNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEG 587
Query: 258 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLK 317
+ + L +T A+ L +R G F I + GL N+ L+L
Sbjct: 588 AASVSELHLT-ANQLESIRSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGLRNVRLLSLY 645
Query: 318 ENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLK 374
+N T+ S L T+++ NP C C + WL L +R T C +P L+
Sbjct: 646 DNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLR 705
Query: 375 YKSLISLSAEDLGCAGA---GLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTR 430
L ++ D C G + + L ++V N+ L+++P K + K
Sbjct: 706 QIPLQDVAFPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLRALP-KGIPK--N 762
Query: 431 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX 490
+ EL + N F+++ G YL+ ++++ + ++ + +F +
Sbjct: 763 VTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 491 XXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLRE 549
I A GL +L L+L N ++ E + A L + I NP+ C C++ WL
Sbjct: 821 Q-CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSS 879
Query: 550 MLVR--RNTSAVFCNSPAPLKYKSLISLSAE 578
+ + C P ++ K L++ A+
Sbjct: 880 WVKTGYKEPGIARCAGPQDMEGKLLLTTPAK 910
Score = 179 (68.1 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 55/193 (28%), Positives = 84/193 (43%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I + E L G +T I N F GL LR L L +N++ ++ + LE L + +
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N ML F+ L RL+++ + + + + AF IEE A
Sbjct: 119 NQLHMLPELLFQNNQALSRLDLS-ENAIQAIPRKAFRGATDLKNLQLDKNQIS-CIEEGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L L L L N T+ S P+LRT + N + C C++ WL + L +R T
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTI 236
Query: 558 AVF--CNSPAPLK 568
+F C+ PA L+
Sbjct: 237 GLFTQCSGPASLR 249
Score = 175 (66.7 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 57/217 (26%), Positives = 91/217 (41%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQL 425
CNS +K A + C+ LT I + + + LR L +N + + T
Sbjct: 507 CNSDVVCPHKC--RCEANVVECSSLKLTKIPERIPQSTAELR---LNNNEISILEATGMF 561
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
KLT L+++ + N S +E G F+G + + L +T A+ L +R G F
Sbjct: 562 KKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT-ANQLESIRSGMFRGLDGLRTLML 620
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
I D+ GL N+ L+L +N T+ S L T+++ NP C C +
Sbjct: 621 RNNRIS-CIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQL 679
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL L +R T C +P L+ L ++ D
Sbjct: 680 AWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPD 716
Score = 174 (66.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 55/189 (29%), Positives = 86/189 (45%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
C G GLT I N ++ +R L L N ++SIP S +L +++ N + +
Sbjct: 295 CRGKGLTAIPANLPETMTEIR-LEL--NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPD 351
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
F+GL L L + G + +T + +G F I DA L NL
Sbjct: 352 AFQGLRSLNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNANKIN-CIRPDAFQDLQNLSL 409
Query: 508 LNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNS 563
L+L +N S ++ + + ++T+ +A+NP C CN+ WL + L R N TS C S
Sbjct: 410 LSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFL-RTNPIETSGARCAS 468
Query: 564 PAPLKYKSL 572
P L K +
Sbjct: 469 PRRLANKRI 477
Score = 157 (60.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 46/149 (30%), Positives = 70/149 (46%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+E+ G N I+RI + F GL LR+L L +NQ+ +V +F + L LR+ N
Sbjct: 65 RLELNGNN-ITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHM 123
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
L + F LS LDL + I AFRG + L++L L N++ I L L
Sbjct: 124 LPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
E L + N + + F + L+ +
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 144 LYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L++N++ + T F L L ++ + N + + DGAF G +S L L L +I
Sbjct: 545 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
FRGL GLR+L+L +NR+ I + L + L + N + + G F L L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLS 664
Query: 263 RLEI 266
L +
Sbjct: 665 TLNL 668
Score = 134 (52.2 bits), Expect = 6.6e-23, Sum P(2) = 6.6e-23
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I +++ F+ + L L L+ NQL +P F L+ L + N + AF
Sbjct: 94 ENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAF 153
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
G L L L ++ I + AFR L GL L L +N + +IP + + +L +
Sbjct: 154 RGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLH 213
Query: 244 QN 245
N
Sbjct: 214 SN 215
Score = 131 (51.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 39/123 (31%), Positives = 55/123 (44%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I I F LR + L +NQ+ + +F L L L + N T L G F
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L + I +AF+ L L L L DN++QS+ + L ++ L + Q
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 245 NGF 247
N F
Sbjct: 439 NPF 441
Score = 130 (50.8 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ LN ++ GAF+ +L +DL + I+ +AF+GL L SLVL N++
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+P L L+ L + N + + F+ L L L + + + + KG F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYD-NKIQSLAKGTF 425
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 40/145 (27%), Positives = 69/145 (47%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ LT L+ + L +N++ + +F ++EL + N ++ G F
Sbjct: 550 NEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMF 609
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ I +++F GL +R L L DN++ ++ L L L +
Sbjct: 610 RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLL 669
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITG 268
N F+ + G KR +TG
Sbjct: 670 ANPFNCNCQLAWLGGWLRKRKIVTG 694
Score = 123 (48.4 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 37/131 (28%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T++ F GL L+ L+L N++ I L L L + N L G F
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 426 TSLRAIQTLHL 436
Score = 121 (47.7 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 44/162 (27%), Positives = 75/162 (46%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP + + +RL L+ N I + L L+ + L + G F+ ++L
Sbjct: 52 LQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKEL 111
Query: 95 VELQLNHNK-HF-PQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L+LN N+ H P+ + + + R+++ +N I I + F G T L+ L LD NQ+
Sbjct: 112 ERLRLNRNQLHMLPELLFQNNQALSRLDL-SENAIQAIPRKAFRGATDLKNLQLDKNQIS 170
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+ +F L L L + N TT+ +FN + +L L
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 117 (46.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L G + L +DL ++++S+++F +S L +L+L+ N LQ
Sbjct: 763 VTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L L L + N S L+ G F ++ L L I GA+ L
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAI-GANPL 868
Score = 105 (42.0 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ AL L L +N ++++P +F L L++ N + + +GAF
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L +T I ++F + LR+ L N L
Sbjct: 178 RALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 105 (42.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 8 ELRSKCMNPYE-PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI 66
+L S+C + P + L IP S L L+ N I ++ A +
Sbjct: 502 QLNSECNSDVVCPHKCRCEANVVECSSLKLTKIPERIPQSTAELRLNNNEISILE-ATGM 560
Query: 67 YLSLQH---VDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIF 122
+ L H ++LS+ I G FE + EL L N+ + + + R +
Sbjct: 561 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLML 620
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
NRIS I F GL +R+L L DNQ+ +V +F L L+ L + N F
Sbjct: 621 RNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPF 673
Score = 102 (41.0 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP++ ++ + L N IK++ A Y L+ +DLS+ I F+ L
Sbjct: 300 LTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Query: 95 VELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L L NK P+ + + + + + + N+I+ I F+ L L +L L DN+++
Sbjct: 360 NSLVLYGNKITDLPRGVFGGLYTLQLL-LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQ 418
Query: 153 SVPTPSFIYLGMLAELRVGLNVF 175
S+ +F L + L + N F
Sbjct: 419 SLAKGTFTSLRAIQTLHLAQNPF 441
Score = 101 (40.6 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 40/182 (21%), Positives = 79/182 (43%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ L+++P K + K + EL + N F+++ G YL+ ++++ +
Sbjct: 741 LDTVVRCSNKHLRALP-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NK 795
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA- 330
++ + +F + I A GL +L L+L N ++ E + A
Sbjct: 796 ISSLSNSSFTNMSQLTTLILSYNALQC-IPPLAFQGLRSLRLLSLHGNDISTLQEGIFAD 854
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
L + I NP+ C C++ WL + + C P ++ K L++ A+ C
Sbjct: 855 VTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFEC 914
Query: 389 AG 390
G
Sbjct: 915 QG 916
Score = 79 (32.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 31/125 (24%), Positives = 53/125 (42%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
LQ+IP K + + T E LE+ N + + F GL L+ L++ + + V +GAF D
Sbjct: 52 LQAIP-KNIPRNT--ERLELNGNNITRIHKNDFAGLKQLRVLQLM-ENQIGAVERGAF-D 106
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAE 341
+ E L L+L ENA + ++ +L+ + + +
Sbjct: 107 DMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDK 166
Query: 342 NPIEC 346
N I C
Sbjct: 167 NQISC 171
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 294 (108.6 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 95/346 (27%), Positives = 150/346 (43%)
Query: 14 MNPYEPSRFSTRDPS---CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS- 69
+ P+ R S R+ + CN + L +P Q L+L +N I VD + YL+
Sbjct: 37 IRPWYTPRSSYREATTVDCN--DLFLTAVPPALPAGTQTLLLQSNSIVRVDQSELGYLAN 94
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRI 127
L +DLS ++ F +L+ L L N+ + S + + + N++
Sbjct: 95 LTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLASLQELYL-NHNQL 153
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
RI F GL+ L L+L+ N LR++ + F L L L +G N + D F L
Sbjct: 154 YRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLA 213
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L +L L G L ISD A GL L SL DN+L +P + L ++ L+ L++ +N
Sbjct: 214 NLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPL 273
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
+ G F + +LK L + L + K A + I A
Sbjct: 274 QRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHH 333
Query: 308 LPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILW 352
LP + L L NA ++ + + + P L+ + + NPI C C I W
Sbjct: 334 LPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRW 379
Score = 185 (70.2 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 62/252 (24%), Positives = 102/252 (40%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+E+ + GL +L L L N + + L + + N + + W EML
Sbjct: 132 LEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRA-IDSRWF-EMLP 189
Query: 359 RRNTSAVFCNSP---APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
+ N + ++ L +L + L AG L ISD A GL L SL DN
Sbjct: 190 NLEILMIGGNKVDAILDMNFRPLANLRS--LVLAGMNLREISDYALEGLQSLESLSFYDN 247
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
+L +P + L ++ L+ L++ +N + G F + +LK L + L + K A
Sbjct: 248 QLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALV 307
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIA 534
+ I A LP + L L NA ++ + + + P L+ + +
Sbjct: 308 NLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLH 367
Query: 535 ENPIECGCNILW 546
NPI C C I W
Sbjct: 368 GNPIRCDCVIRW 379
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 223 (83.6 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 94/382 (24%), Positives = 162/382 (42%)
Query: 177 TLADGAFNGLGRLS--ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
TL+ G+ + S +D RG GLT I N ++ +R L L N ++SIP S
Sbjct: 276 TLSSGSCPAMCSCSNGIVDCRGKGLTAIPANLPETMTEIR-LEL--NGIKSIPPGAFSPY 332
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 294
+L +++ N + + F+GL L L + G + +T + +G F
Sbjct: 333 RKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNAN 391
Query: 295 XXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWL 353
+ A L NL L+L +N S ++ + + ++T+ +A+NP C CN+ WL
Sbjct: 392 KINC-VRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWL 450
Query: 354 REMLVRRN---TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGL-SGLRS 409
+ L R N TS C SP L K + + ++ C+ I L S S
Sbjct: 451 ADFL-RTNPIETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNS 509
Query: 410 LVLTDNRLQ---SIPTKQLSKLTRLEE--------LEIGQNGFSMLEA-GCFKGLSYLKR 457
+ ++ + S+ KLT++ E L + N S+LEA G FK L++LK+
Sbjct: 510 DAVCPHKCRCEASLAECSSLKLTKIPERIPQSTAELRLNNNEISILEATGIFKKLTHLKK 569
Query: 458 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTS 517
+ ++ + ++ + GAF + I GL L L L+ N +
Sbjct: 570 INLSN-NKVSEIEDGAF-EGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC 627
Query: 518 F-SESMLAWPELRTIDIAENPI 538
++S +R + + +N I
Sbjct: 628 IHNDSFTGLRNVRLLSLYDNQI 649
Score = 217 (81.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 69/291 (23%), Positives = 120/291 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+L G +T I N F GL LR L L +N++ + + LE L + +N L
Sbjct: 66 LELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLP 125
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L RL+++ + + + + AF IEEGA L L
Sbjct: 126 ELLFQNNQALSRLDLS-ENTIQAIPRKAFRGATDLKNLQLDKNQISC-IEEGAFRALRGL 183
Query: 312 YHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T+ S P+LRT + N + C C++ WL + L +R T +F C+
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCS 243
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
PA L+ ++ + + C+G G + ++ N + K L+ +
Sbjct: 244 GPASLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCSCSNGIVDCRGKGLTAI 303
Query: 429 TR-----LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ E+ + NG + G F L+R++++ + + + AF
Sbjct: 304 PANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSN-NQIAEIAPDAF 353
Score = 211 (79.3 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 87/390 (22%), Positives = 157/390 (40%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKG 257
LT I + + + LR L +N + + T KLT L+++ + N S +E G F+G
Sbjct: 531 LTKIPERIPQSTAELR---LNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEG 587
Query: 258 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLK 317
+ + L +T A+ L +R G F I + GL N+ L+L
Sbjct: 588 AASVSELHLT-ANQLESIRSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGLRNVRLLSLY 645
Query: 318 ENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLK 374
+N + S L T+++ NP C C + WL + L RR T C +P L+
Sbjct: 646 DNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLR 705
Query: 375 YKSLISLSAEDLGCAGA---GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 431
L ++ D C G + + L ++V N+ + K + K +
Sbjct: 706 QIPLQDVAFPDFRCEEGQEEGSCLPRPQCPQECACLDTVVRCSNKHLHVLPKGIPK--NV 763
Query: 432 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 491
EL + N F+++ G YL+ ++++ + ++ + +F +
Sbjct: 764 TELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 492 XIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREM 550
I A GL +L L+L N ++ E + L + I NP+ C C++ WL
Sbjct: 822 -CIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 551 LVR--RNTSAVFCNSPAPLKYKSLISLSAE 578
+ + C P ++ K L++ A+
Sbjct: 881 VKTGYKEPGIARCVGPPDMEGKLLLTTPAK 910
Score = 180 (68.4 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 58/217 (26%), Positives = 92/217 (42%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQL 425
CNS A +K S + C+ LT I + + + LR L +N + + T
Sbjct: 507 CNSDAVCPHKCRCEASLAE--CSSLKLTKIPERIPQSTAELR---LNNNEISILEATGIF 561
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
KLT L+++ + N S +E G F+G + + L +T A+ L +R G F
Sbjct: 562 KKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT-ANQLESIRSGMFRGLDGLRTLML 620
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
I D+ GL N+ L+L +N + S L T+++ NP C C +
Sbjct: 621 RNNRIS-CIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQL 679
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL + L RR T C +P L+ L ++ D
Sbjct: 680 AWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPD 716
Score = 175 (66.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 56/200 (28%), Positives = 91/200 (45%)
Query: 377 SLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
++ S S + C G GLT I N ++ +R L L N ++SIP S +L +++
Sbjct: 284 AMCSCSNGIVDCRGKGLTAIPANLPETMTEIR-LEL--NGIKSIPPGAFSPYRKLRRIDL 340
Query: 437 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEE 496
N + + F+GL L L + G + +T + +G F +
Sbjct: 341 SNNQIAEIAPDAFQGLRSLNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNANKIN-CVRP 398
Query: 497 DALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN 555
DA L NL L+L +N S ++ + + ++T+ +A+NP C CN+ WL + L R N
Sbjct: 399 DAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFL-RTN 457
Query: 556 ---TSAVFCNSPAPLKYKSL 572
TS C SP L K +
Sbjct: 458 PIETSGARCASPRRLANKRI 477
Score = 173 (66.0 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 55/193 (28%), Positives = 82/193 (42%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I S E L G +T I N F GL LR L L +N++ + + LE L + +
Sbjct: 59 IPRSTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNR 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N L F+ L RL+++ + + + + AF IEE A
Sbjct: 119 NQLHTLPELLFQNNQALSRLDLS-ENTIQAIPRKAFRGATDLKNLQLDKNQIS-CIEEGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L L L L N T+ S P+LRT + N + C C++ WL + L +R T
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTI 236
Query: 558 AVF--CNSPAPLK 568
+F C+ PA L+
Sbjct: 237 GLFTQCSGPASLR 249
Score = 160 (61.4 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 48/152 (31%), Positives = 71/152 (46%)
Query: 115 SPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
S R+E+ G N I+RI + F GL LR+L L +NQ+ V +F + L LR+ N
Sbjct: 62 STERLELNGNN-ITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQ 120
Query: 175 FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
TL + F LS LDL + I AFRG + L++L L N++ I L
Sbjct: 121 LHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL 180
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
LE L + N + + F + L+ +
Sbjct: 181 RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 141 (54.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 144 LYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L++N++ + T F L L ++ + N + + DGAF G +S L L L +I
Sbjct: 545 LRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 604
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
FRGL GLR+L+L +NR+ I + L + L + N + + G F L L
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALS 664
Query: 263 RLEI 266
L +
Sbjct: 665 TLNL 668
Score = 136 (52.9 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 46/164 (28%), Positives = 78/164 (47%)
Query: 34 ANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQE 92
A L IP + S +RL L+ N I + + L L+ + L ++ G F+ +
Sbjct: 50 AGLQAIPKNIPRSTERLELNGNNITRIHKNDFVGLKQLRVLQLMENQIGVVERGAFDDMK 109
Query: 93 KLVELQLNHNK-H-FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQ 150
+L L+LN N+ H P+ + + + R+++ +N I I + F G T L+ L LD NQ
Sbjct: 110 ELERLRLNRNQLHTLPELLFQNNQALSRLDL-SENTIQAIPRKAFRGATDLKNLQLDKNQ 168
Query: 151 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+ + +F L L L + N TT+ +FN + +L L
Sbjct: 169 ISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 115 (45.5 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L G + L +DL ++++S+++F +S L +L+L+ N LQ
Sbjct: 763 VTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L L L + N S L G F ++ L L I GA+ L
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAI-GANPL 868
Score = 115 (45.5 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 48/174 (27%), Positives = 78/174 (44%)
Query: 25 RDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYL--SLQHVDLSHTTWLI 82
R PSC L + + S SN + R K + +AIP L ++ + L
Sbjct: 271 RVPSCTLSSGSCPAMCSCSNGIVDC------RGKGL-TAIPANLPETMTEIRLELNGIKS 323
Query: 83 IPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
IP G F P KL + L++N+ + S + ++G N+I+ + + F GL
Sbjct: 324 IPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYG-NKITDLPRGVFGGLYT 382
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
L++L L+ N++ V +F L L+ L + N +LA G F L + L L
Sbjct: 383 LQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHL 436
Score = 108 (43.1 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 8 ELRSKCMNPYE-PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI 66
+L S+C + P + L IP S L L+ N I ++ A I
Sbjct: 502 QLNSECNSDAVCPHKCRCEASLAECSSLKLTKIPERIPQSTAELRLNNNEISILE-ATGI 560
Query: 67 YLSLQH---VDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIF 122
+ L H ++LS+ I G FE + EL L N+ + + + R +
Sbjct: 561 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLML 620
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
NRIS I F GL +R+L L DNQ+ ++ +F L L+ L + N F
Sbjct: 621 RNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPF 673
Score = 105 (42.0 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ AL L L +N ++++P +F L L++ N + + +GAF
Sbjct: 118 RNQLHTLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L +T I ++F + LR+ L N L
Sbjct: 178 RALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 102 (41.0 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 38/160 (23%), Positives = 72/160 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSH 77
P+ S + + + L IP++ ++ + L N IK++ A Y L+ +DLS+
Sbjct: 283 PAMCSCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSN 342
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I F+ L L L NK P+ + + + + + + N+I+ + F
Sbjct: 343 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL-LLNANKINCVRPDAF 401
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ L L +L L DN+++S+ +F L + L + N F
Sbjct: 402 QDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPF 441
Score = 91 (37.1 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 37/181 (20%), Positives = 74/181 (40%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L ++V N+ + K + K + EL + N F+++ G YL+ ++++ + +
Sbjct: 741 LDTVVRCSNKHLHVLPKGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NKI 796
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-W 331
+ + +F + I A GL +L L+L N ++ E +
Sbjct: 797 SSLSNSSFTNMSQLTTLILSYNALQC-IPPLAFQGLRSLRLLSLHGNDISTLREGIFTDV 855
Query: 332 PELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
L + I NP+ C C++ WL + + C P ++ K L++ A+ C
Sbjct: 856 TSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCVGPPDMEGKLLLTTPAKKFECQ 915
Query: 390 G 390
G
Sbjct: 916 G 916
Score = 37 (18.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 5/10 (50%), Positives = 7/10 (70%)
Query: 535 ENPIECGCNI 544
E P +CGC +
Sbjct: 1523 EKPTKCGCAV 1532
Score = 37 (18.1 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 5/10 (50%), Positives = 7/10 (70%)
Query: 341 ENPIECGCNI 350
E P +CGC +
Sbjct: 1523 EKPTKCGCAV 1532
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 286 (105.7 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 86/308 (27%), Positives = 141/308 (45%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P++++L+L N I + + + L SL+ +DLS + L +P F + L L ++ N
Sbjct: 70 PNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKTLIISSND 129
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ + + + I NR+S + + + L+ LR L L N+L S+P L
Sbjct: 130 VQLGPECFAGLSQLQTLSI-ADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNL 188
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
G L L++ N+ ++L G F L LD+ + +I + A GL L +L LT+N+
Sbjct: 189 GGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQ 248
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L +P S L L+ L++ N F LE F GL L+ L I+ + NL ++ F
Sbjct: 249 LVRLPGNTWS-LPALKTLDLSSNLFVSLETASFDGLPALQYLNISHSRNLKTIQMATFVQ 307
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAEN 342
I A +P L HL+L N + ML WP +R + +A N
Sbjct: 308 LSSLHWLSISSSALTH-IHPSAFNPIPPLSHLDLSNNELRYVAPGMLQWPNIRNLHLANN 366
Query: 343 PIECGCNI 350
C C++
Sbjct: 367 DWHCSCDL 374
Score = 233 (87.1 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 85/336 (25%), Positives = 142/336 (42%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
L L++NR+ + +LS LE+L + N + L A F L L+ L+++ +++L +
Sbjct: 51 LDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLS-SNSLLSL 109
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPEL 334
F+ E GL L L++ +N + S+L L
Sbjct: 110 PNEVFSKLKNLKTLIISSNDVQLGPE--CFAGLSQLQTLSIADNRLSFLPPSVLKPLSGL 167
Query: 335 RTIDIAEN-----PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLS-AEDLGC 388
R +D++ N P N+ L + +++N + + L K L L +E+L
Sbjct: 168 RNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSL-ETGMFLSQKELKHLDVSENL-- 224
Query: 389 AGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
+ +I + A GL L +L LT+N+L +P S L L+ L++ N F LE
Sbjct: 225 ----IGDIEEGALYGLEKLETLNLTNNQLVRLPGNTWS-LPALKTLDLSSNLFVSLETAS 279
Query: 449 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHL 508
F GL L+ L I+ + NL ++ F I A +P L HL
Sbjct: 280 FDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHI-HPSAFNPIPPLSHL 338
Query: 509 NLKENAFTSFSESMLAWPELRTIDIAENPIECGCNI 544
+L N + ML WP +R + +A N C C++
Sbjct: 339 DLSNNELRYVAPGMLQWPNIRNLHLANNDWHCSCDL 374
Score = 202 (76.2 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 78/329 (23%), Positives = 134/329 (40%)
Query: 113 IISPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 171
++ PR + NRISR+ L L L +N + + F L L L +
Sbjct: 43 LLDPRTTVLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLS 102
Query: 172 LNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 231
N +L + F+ L L L + + + F GLS L++L + DNRL +P L
Sbjct: 103 SNSLLSLPNEVFSKLKNLKTLIISSNDV-QLGPECFAGLSQLQTLSIADNRLSFLPPSVL 161
Query: 232 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 291
L+ L L++ N + A L L+ L++ + L+ + G F
Sbjct: 162 KPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLK-QNLLSSLETGMFLSQKELKHLDV 220
Query: 292 XXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNIL 351
IEEGAL GL L LNL N + + P L+T+D++ N +
Sbjct: 221 SENLIGD-IEEGALYGLEKLETLNLTNNQLVRLPGNTWSLPALKTLDLSSN-LFVSLETA 278
Query: 352 WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED-LGCAGAGLTNISDNAFRGLSGLRSL 410
+ + + + ++ + + LS+ L + + LT+I +AF + L L
Sbjct: 279 SFDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLSHL 338
Query: 411 VLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L++N L+ + L + + L + N
Sbjct: 339 DLSNNELRYVAPGML-QWPNIRNLHLANN 366
Score = 170 (64.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 86/323 (26%), Positives = 135/323 (41%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSA-----------LDLRGAGLTNISDNAFRGLSGL 213
L + + L+ TT+ D + N + RLSA L L +T++S + F L L
Sbjct: 37 LRSIPILLDPRTTVLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSL 96
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L L+ N L S+P + SKL L+ L I N L CF GLS L+ L I A N
Sbjct: 97 RVLDLSSNSLLSLPNEVFSKLKNLKTLIISSNDVQ-LGPECFAGLSQLQTLSI--ADNRL 153
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM-LAWP 332
+ + + L L L LK+N +S M L+
Sbjct: 154 SFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQK 213
Query: 333 ELRTIDIAENPI-ECGCNILWLREMLVRRN-TSAVFCNSPAPLKYKSLISLSAEDLGCAG 390
EL+ +D++EN I + L+ E L N T+ P SL +L DL +
Sbjct: 214 ELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQLVRLPG--NTWSLPALKTLDL--SS 269
Query: 391 AGLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
++ +F GL L+ L ++ +R L++I +L+ L L I + + + F
Sbjct: 270 NLFVSLETASFDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAF 329
Query: 450 KGLSYLKRLEITGASNLTRVRKG 472
+ L L+++ + L V G
Sbjct: 330 NPIPPLSHLDLSN-NELRYVAPG 351
Score = 158 (60.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 68/306 (22%), Positives = 122/306 (39%)
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
+L L +N++ + L +L + N T L+ F+ L L LDL L ++
Sbjct: 50 VLDLSNNRISRLSADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSL 109
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ F L L++L+++ N +Q P + + L++L+ L I N S L K LS L+
Sbjct: 110 PNEVFSKLKNLKTLIISSNDVQLGP-ECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLR 168
Query: 263 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFT 322
L+++ A+ L + + + +E G + L HL++ EN
Sbjct: 169 NLDLS-ANKLLSM-PASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIG 226
Query: 323 SFSESMLAWPE-LRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISL 381
E L E L T+++ N + W L + S+ S + L +L
Sbjct: 227 DIEEGALYGLEKLETLNLTNNQLVRLPGNTWSLPALKTLDLSSNLFVSLETASFDGLPAL 286
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
++ + L I F LS L L ++ + L I + + L L++ N
Sbjct: 287 QYLNISHS-RNLKTIQMATFVQLSSLHWLSISSSALTHIHPSAFNPIPPLSHLDLSNNEL 345
Query: 442 SMLEAG 447
+ G
Sbjct: 346 RYVAPG 351
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 239 (89.2 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 105/422 (24%), Positives = 169/422 (40%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N T + F GL +L L L + + AF + L L L N+LQ +P
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 287
L L++ +N + F+G + LK L++ + ++ + +GAF
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLD-KNQISCIEEGAFR-ALRGL 183
Query: 288 XXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE--LR---TIDI--- 339
I + +P L L N F + LAW LR TI +
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL--FCDCHLAWLSQWLRQRPTIGLFTQ 241
Query: 340 AENPIEC-GCNILWLREMLVRRNTSAVFCNSPA-PLKYKS---LISLSAEDLGCAGAGLT 394
P G N+ +++ + PA L S + S S + C G GLT
Sbjct: 242 CSGPASLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLT 301
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I N ++ +R L L N ++SIP S +L +++ N + + F+GL
Sbjct: 302 AIPANLPETMTEIR-LEL--NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRS 358
Query: 455 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENA 514
L L + G + +T + +G F I DA L NL L+L +N
Sbjct: 359 LNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNANKIN-CIRPDAFQDLQNLSLLSLYDNK 416
Query: 515 FTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPLKYK 570
S ++ + + ++T+ +A+NP C CN+ WL + L R N T+ C SP L K
Sbjct: 417 IQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFL-RTNPIETTGARCASPRRLANK 475
Query: 571 SL 572
+
Sbjct: 476 RI 477
Score = 226 (84.6 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 92/401 (22%), Positives = 168/401 (41%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL-SKLTRLEELEIGQNGFS 248
S ++ G L+ I + + + LR L +N + + L KL+ L+++ + N S
Sbjct: 522 SVVECSGLKLSKIPERIPQSTTELR---LNNNEISILEATGLFKKLSHLKKINLSNNKVS 578
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+E G F+G + + L +T A+ L VR G F I + GL
Sbjct: 579 EIEDGTFEGATSVSELHLT-ANQLESVRSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGL 636
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAV 365
N+ L+L +N T+ S L T+++ NP C C + WL + L +R T
Sbjct: 637 RNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNP 696
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNIS----DNAFRGLSGLRSLVLTDNR-LQSI 420
C +P L+ L ++ D C G + + + L ++V N+ LQ++
Sbjct: 697 RCQNPDFLRQIPLQDVAFPDFRCE-EGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQAL 755
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 480
P K + K + EL + N F+++ G YL+ ++++ + ++ + +F +
Sbjct: 756 P-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NKISSLSNSSFTNMSQL 810
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
I A GL +L L+L N ++ E + A L + I NP+
Sbjct: 811 TTLILSYNALQ-CIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLY 869
Query: 540 CGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAE 578
C C++ WL + + C P ++ K L++ A+
Sbjct: 870 CDCHLRWLSSWVKTGYKEPGIARCAGPPEMEGKLLLTTPAK 910
Score = 182 (69.1 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 56/193 (29%), Positives = 85/193 (44%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I + E L G +T I N F GL LR L L +N++ ++ + LE L + +
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N +L F+ L RL+++ ++L V + AF IEE A
Sbjct: 119 NQLQVLPELLFQNNQALSRLDLS-ENSLQAVPRKAFRGATDLKNLQLDKNQIS-CIEEGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L L L L N T+ S P+LRT + N + C C++ WL + L +R T
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTI 236
Query: 558 AVF--CNSPAPLK 568
+F C+ PA L+
Sbjct: 237 GLFTQCSGPASLR 249
Score = 179 (68.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 87/354 (24%), Positives = 137/354 (38%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I I F LR + L +NQ+ + +F L L L + N T L G F
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L + I +AF+ L L L L DN++QS+ + L ++ L + Q
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N F C L +L T T R + +E
Sbjct: 439 NPFI-----CDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRCSAKEQY 493
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNTS 363
+ YHLN S S +A P + + +EC G + + E + + T
Sbjct: 494 FIPGTEDYHLN-------SECTSDVACPHKCRCEASV--VECSGLKLSKIPERIPQSTTE 544
Query: 364 AVFCNSPAP-LKYKSLIS-LS-AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
N+ L+ L LS + + + ++ I D F G + + L LT N+L+S+
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ L L L + N S + F GL ++ L + +++T + GAF
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYD-NHITTISPGAF 657
Score = 171 (65.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 56/217 (25%), Positives = 92/217 (42%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL- 425
C S +K S + C+G L+ I + + + LR L +N + + L
Sbjct: 507 CTSDVACPHKCRCEASVVE--CSGLKLSKIPERIPQSTTELR---LNNNEISILEATGLF 561
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
KL+ L+++ + N S +E G F+G + + L +T A+ L VR G F
Sbjct: 562 KKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLT-ANQLESVRSGMFRGLDGLRTLML 620
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
I D+ GL N+ L+L +N T+ S L T+++ NP C C +
Sbjct: 621 RNNRIS-CIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQL 679
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL + L +R T C +P L+ L ++ D
Sbjct: 680 AWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPD 716
Score = 160 (61.4 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 46/149 (30%), Positives = 70/149 (46%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+E+ G N I+RI + F GL LR+L L +NQ+ +V +F + L LR+ N
Sbjct: 65 RLELNGNN-ITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQV 123
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
L + F LS LDL L + AFRG + L++L L N++ I L L
Sbjct: 124 LPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
E L + N + + F + L+ +
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 145 (56.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTT 177
VE G ++S+I + + T LR L++N++ + T F L L ++ + N +
Sbjct: 524 VECSGL-KLSKIPERIPQSTTELR---LNNNEISILEATGLFKKLSHLKKINLSNNKVSE 579
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ DG F G +S L L L ++ FRGL GLR+L+L +NR+ I + L +
Sbjct: 580 IEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNV 639
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L + N + + G F L L L +
Sbjct: 640 RLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 131 (51.2 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I +++ F+ + L L L+ NQL+ +P F L+ L + N + AF
Sbjct: 94 ENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAF 153
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
G L L L ++ I + AFR L GL L L +N + +IP + + +L +
Sbjct: 154 RGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLH 213
Query: 244 QN 245
N
Sbjct: 214 SN 215
Score = 130 (50.8 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ LN ++ GAF+ +L +DL + I+ +AF+GL L SLVL N++
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+P L L+ L + N + + F+ L L L + + + + KG F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYD-NKIQSLAKGTF 425
Score = 123 (48.4 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 37/131 (28%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T++ F GL L+ L+L N++ I L L L + N L G F
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 426 TSLRAIQTLHL 436
Score = 123 (48.4 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 90 PQEKLVELQLNHNKHFPQQ---IVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
PQ EL+LN+N+ + + + +++ + N++S I+ FEG T++ L+L
Sbjct: 539 PQST-TELRLNNNEISILEATGLFKKLSHLKKINL-SNNKVSEIEDGTFEGATSVSELHL 596
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
NQL SV + F L L L + N + + + +F GL + L L +T IS A
Sbjct: 597 TANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGA 656
Query: 207 FRGLSGLRSLVLTDN 221
F L L +L L N
Sbjct: 657 FDTLQALSTLNLLAN 671
Score = 121 (47.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ L+ L+ + L +N++ + +F ++EL + N ++ G F
Sbjct: 550 NEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMF 609
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ I +++F GL +R L L DN + +I L L L +
Sbjct: 610 RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLL 669
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITG 268
N F+ + G KR +TG
Sbjct: 670 ANPFNCNCQLAWLGDWLRKRKIVTG 694
Score = 116 (45.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L G + L +DL ++++S+++F +S L +L+L+ N LQ
Sbjct: 763 VTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L L L + N S L+ G F ++ L L I GA+ L
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAI-GANPL 868
Score = 114 (45.2 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP + + +RL L+ N I + L L+ + L + G F+ ++L
Sbjct: 52 LQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKEL 111
Query: 95 VELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L+LN N+ P+ + + + R+++ +N + + + F G T L+ L LD NQ+
Sbjct: 112 ERLRLNRNQLQVLPELLFQNNQALSRLDL-SENSLQAVPRKAFRGATDLKNLQLDKNQIS 170
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+ +F L L L + N TT+ +FN + +L L
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 108 (43.1 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ AL L L +N L++VP +F L L++ N + + +GAF
Sbjct: 118 RNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L +T I ++F + LR+ L N L
Sbjct: 178 RALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 104 (41.7 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 41/182 (22%), Positives = 79/182 (43%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ LQ++P K + K + EL + N F+++ G YL+ ++++ +
Sbjct: 741 LDTVVRCSNKHLQALP-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NK 795
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA- 330
++ + +F + I A GL +L L+L N ++ E + A
Sbjct: 796 ISSLSNSSFTNMSQLTTLILSYNALQC-IPPLAFQGLRSLRLLSLHGNDVSTLQEGIFAD 854
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
L + I NP+ C C++ WL + + C P ++ K L++ A+ C
Sbjct: 855 VTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFEC 914
Query: 389 AG 390
G
Sbjct: 915 QG 916
Score = 103 (41.3 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 39/160 (24%), Positives = 72/160 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSH 77
P+ S + + + L IP++ ++ + L N IK++ A Y L+ +DLS+
Sbjct: 283 PAMCSCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSN 342
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I F+ L L L NK P+ + + + + + + N+I+ I F
Sbjct: 343 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL-LLNANKINCIRPDAF 401
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ L L +L L DN+++S+ +F L + L + N F
Sbjct: 402 QDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPF 441
Score = 100 (40.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 41/144 (28%), Positives = 63/144 (43%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQH---VDLSHTTWLIIPIGGFEPQE 92
L IP S L L+ N I ++ A ++ L H ++LS+ I G FE
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILE-ATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAT 589
Query: 93 KLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQL 151
+ EL L N+ + + + R + NRIS I F GL +R+L L DN +
Sbjct: 590 SVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHI 649
Query: 152 RSVPTPSFIYLGMLAELRVGLNVF 175
++ +F L L+ L + N F
Sbjct: 650 TTISPGAFDTLQALSTLNLLANPF 673
Score = 75 (31.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 30/125 (24%), Positives = 53/125 (42%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
LQ+IP K + + T E LE+ N + + F GL L+ L++ + + V +GAF D
Sbjct: 52 LQAIP-KNIPRNT--ERLELNGNNITRIHKNDFAGLKQLRVLQLM-ENQIGAVERGAF-D 106
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAE 341
+ E L L+L EN+ + ++ +L+ + + +
Sbjct: 107 DMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDK 166
Query: 342 NPIEC 346
N I C
Sbjct: 167 NQISC 171
Score = 57 (25.1 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 30 NLQEANLDVIPSHS---NPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPI 85
+L E +L +P + ++ L L N+I ++ A L+ + L++ IP+
Sbjct: 139 DLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPV 198
Query: 86 GGFEPQEKLVELQLNHNKH 104
F KL +L H+ H
Sbjct: 199 SSFNHMPKLRTFRL-HSNH 216
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 239 (89.2 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 105/422 (24%), Positives = 169/422 (40%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N T + F GL +L L L + + AF + L L L N+LQ +P
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 287
L L++ +N + F+G + LK L++ + ++ + +GAF
Sbjct: 126 ELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLD-KNQISCIEEGAFR-ALRGL 183
Query: 288 XXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE--LR---TIDI--- 339
I + +P L L N F + LAW LR TI +
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL--FCDCHLAWLSQWLRQRPTIGLFTQ 241
Query: 340 AENPIEC-GCNILWLREMLVRRNTSAVFCNSPA-PLKYKS---LISLSAEDLGCAGAGLT 394
P G N+ +++ + PA L S + S S + C G GLT
Sbjct: 242 CSGPASLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNGIVDCRGKGLT 301
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I N ++ +R L L N ++SIP S +L +++ N + + F+GL
Sbjct: 302 AIPANLPETMTEIR-LEL--NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRS 358
Query: 455 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENA 514
L L + G + +T + +G F I DA L NL L+L +N
Sbjct: 359 LNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNANKIN-CIRPDAFQDLQNLSLLSLYDNK 416
Query: 515 FTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPLKYK 570
S ++ + + ++T+ +A+NP C CN+ WL + L R N T+ C SP L K
Sbjct: 417 IQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFL-RTNPIETTGARCASPRRLANK 475
Query: 571 SL 572
+
Sbjct: 476 RI 477
Score = 226 (84.6 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 92/401 (22%), Positives = 168/401 (41%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL-SKLTRLEELEIGQNGFS 248
S ++ G L+ I + + + LR L +N + + L KL+ L+++ + N S
Sbjct: 522 SVVECSGLKLSKIPERIPQSTTELR---LNNNEISILEATGLFKKLSHLKKINLSNNKVS 578
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+E G F+G + + L +T A+ L VR G F I + GL
Sbjct: 579 EIEDGTFEGATSVSELHLT-ANQLESVRSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGL 636
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAV 365
N+ L+L +N T+ S L T+++ NP C C + WL + L +R T
Sbjct: 637 RNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNP 696
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNIS----DNAFRGLSGLRSLVLTDNR-LQSI 420
C +P L+ L ++ D C G + + + L ++V N+ LQ++
Sbjct: 697 RCQNPDFLRQIPLQDVAFPDFRCE-EGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQAL 755
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 480
P K + K + EL + N F+++ G YL+ ++++ + ++ + +F +
Sbjct: 756 P-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NKISSLSNSSFTNMSQL 810
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
I A GL +L L+L N ++ E + A L + I NP+
Sbjct: 811 TTLILSYNALQ-CIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLY 869
Query: 540 CGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAE 578
C C++ WL + + C P ++ K L++ A+
Sbjct: 870 CDCHLRWLSSWVKTGYKEPGIARCAGPPEMEGKLLLTTPAK 910
Score = 182 (69.1 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 56/193 (29%), Positives = 85/193 (44%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I + E L G +T I N F GL LR L L +N++ ++ + LE L + +
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N +L F+ L RL+++ ++L V + AF IEE A
Sbjct: 119 NQLQVLPELLFQNNQALSRLDLS-ENSLQAVPRKAFRGATDLKNLQLDKNQIS-CIEEGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L L L L N T+ S P+LRT + N + C C++ WL + L +R T
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTI 236
Query: 558 AVF--CNSPAPLK 568
+F C+ PA L+
Sbjct: 237 GLFTQCSGPASLR 249
Score = 179 (68.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 87/354 (24%), Positives = 137/354 (38%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I I F LR + L +NQ+ + +F L L L + N T L G F
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L + I +AF+ L L L L DN++QS+ + L ++ L + Q
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N F C L +L T T R + +E
Sbjct: 439 NPFI-----CDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRCSAKEQY 493
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNTS 363
+ YHLN S S +A P + + +EC G + + E + + T
Sbjct: 494 FIPGTEDYHLN-------SECTSDVACPHKCRCEASV--VECSGLKLSKIPERIPQSTTE 544
Query: 364 AVFCNSPAP-LKYKSLIS-LS-AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
N+ L+ L LS + + + ++ I D F G + + L LT N+L+S+
Sbjct: 545 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 604
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ L L L + N S + F GL ++ L + +++T + GAF
Sbjct: 605 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYD-NHITTISPGAF 657
Score = 171 (65.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 56/217 (25%), Positives = 92/217 (42%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL- 425
C S +K S + C+G L+ I + + + LR L +N + + L
Sbjct: 507 CTSDVACPHKCRCEASVVE--CSGLKLSKIPERIPQSTTELR---LNNNEISILEATGLF 561
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
KL+ L+++ + N S +E G F+G + + L +T A+ L VR G F
Sbjct: 562 KKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLT-ANQLESVRSGMFRGLDGLRTLML 620
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
I D+ GL N+ L+L +N T+ S L T+++ NP C C +
Sbjct: 621 RNNRIS-CIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQL 679
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL + L +R T C +P L+ L ++ D
Sbjct: 680 AWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPD 716
Score = 160 (61.4 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 46/149 (30%), Positives = 70/149 (46%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+E+ G N I+RI + F GL LR+L L +NQ+ +V +F + L LR+ N
Sbjct: 65 RLELNGNN-ITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQV 123
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
L + F LS LDL L + AFRG + L++L L N++ I L L
Sbjct: 124 LPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGL 183
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
E L + N + + F + L+ +
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 145 (56.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTT 177
VE G ++S+I + + T LR L++N++ + T F L L ++ + N +
Sbjct: 524 VECSGL-KLSKIPERIPQSTTELR---LNNNEISILEATGLFKKLSHLKKINLSNNKVSE 579
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ DG F G +S L L L ++ FRGL GLR+L+L +NR+ I + L +
Sbjct: 580 IEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNV 639
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L + N + + G F L L L +
Sbjct: 640 RLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 131 (51.2 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I +++ F+ + L L L+ NQL+ +P F L+ L + N + AF
Sbjct: 94 ENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAF 153
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
G L L L ++ I + AFR L GL L L +N + +IP + + +L +
Sbjct: 154 RGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLH 213
Query: 244 QN 245
N
Sbjct: 214 SN 215
Score = 130 (50.8 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ LN ++ GAF+ +L +DL + I+ +AF+GL L SLVL N++
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+P L L+ L + N + + F+ L L L + + + + KG F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYD-NKIQSLAKGTF 425
Score = 123 (48.4 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 37/131 (28%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T++ F GL L+ L+L N++ I L L L + N L G F
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 426 TSLRAIQTLHL 436
Score = 123 (48.4 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 90 PQEKLVELQLNHNKHFPQQ---IVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
PQ EL+LN+N+ + + + +++ + N++S I+ FEG T++ L+L
Sbjct: 539 PQST-TELRLNNNEISILEATGLFKKLSHLKKINL-SNNKVSEIEDGTFEGATSVSELHL 596
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
NQL SV + F L L L + N + + + +F GL + L L +T IS A
Sbjct: 597 TANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGA 656
Query: 207 FRGLSGLRSLVLTDN 221
F L L +L L N
Sbjct: 657 FDTLQALSTLNLLAN 671
Score = 121 (47.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ L+ L+ + L +N++ + +F ++EL + N ++ G F
Sbjct: 550 NEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMF 609
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ I +++F GL +R L L DN + +I L L L +
Sbjct: 610 RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLL 669
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITG 268
N F+ + G KR +TG
Sbjct: 670 ANPFNCNCQLAWLGDWLRKRKIVTG 694
Score = 116 (45.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L G + L +DL ++++S+++F +S L +L+L+ N LQ
Sbjct: 763 VTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L L L + N S L+ G F ++ L L I GA+ L
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAI-GANPL 868
Score = 114 (45.2 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP + + +RL L+ N I + L L+ + L + G F+ ++L
Sbjct: 52 LQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKEL 111
Query: 95 VELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L+LN N+ P+ + + + R+++ +N + + + F G T L+ L LD NQ+
Sbjct: 112 ERLRLNRNQLQVLPELLFQNNQALSRLDL-SENSLQAVPRKAFRGATDLKNLQLDKNQIS 170
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+ +F L L L + N TT+ +FN + +L L
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 108 (43.1 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ AL L L +N L++VP +F L L++ N + + +GAF
Sbjct: 118 RNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L +T I ++F + LR+ L N L
Sbjct: 178 RALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 104 (41.7 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 41/182 (22%), Positives = 79/182 (43%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ LQ++P K + K + EL + N F+++ G YL+ ++++ +
Sbjct: 741 LDTVVRCSNKHLQALP-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NK 795
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA- 330
++ + +F + I A GL +L L+L N ++ E + A
Sbjct: 796 ISSLSNSSFTNMSQLTTLILSYNALQC-IPPLAFQGLRSLRLLSLHGNDVSTLQEGIFAD 854
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
L + I NP+ C C++ WL + + C P ++ K L++ A+ C
Sbjct: 855 VTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFEC 914
Query: 389 AG 390
G
Sbjct: 915 QG 916
Score = 103 (41.3 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 39/160 (24%), Positives = 72/160 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSH 77
P+ S + + + L IP++ ++ + L N IK++ A Y L+ +DLS+
Sbjct: 283 PAMCSCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSN 342
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I F+ L L L NK P+ + + + + + + N+I+ I F
Sbjct: 343 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL-LLNANKINCIRPDAF 401
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ L L +L L DN+++S+ +F L + L + N F
Sbjct: 402 QDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPF 441
Score = 100 (40.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 41/144 (28%), Positives = 63/144 (43%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQH---VDLSHTTWLIIPIGGFEPQE 92
L IP S L L+ N I ++ A ++ L H ++LS+ I G FE
Sbjct: 531 LSKIPERIPQSTTELRLNNNEISILE-ATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAT 589
Query: 93 KLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQL 151
+ EL L N+ + + + R + NRIS I F GL +R+L L DN +
Sbjct: 590 SVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHI 649
Query: 152 RSVPTPSFIYLGMLAELRVGLNVF 175
++ +F L L+ L + N F
Sbjct: 650 TTISPGAFDTLQALSTLNLLANPF 673
Score = 75 (31.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 30/125 (24%), Positives = 53/125 (42%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
LQ+IP K + + T E LE+ N + + F GL L+ L++ + + V +GAF D
Sbjct: 52 LQAIP-KNIPRNT--ERLELNGNNITRIHKNDFAGLKQLRVLQLM-ENQIGAVERGAF-D 106
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAE 341
+ E L L+L EN+ + ++ +L+ + + +
Sbjct: 107 DMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDK 166
Query: 342 NPIEC 346
N I C
Sbjct: 167 NQISC 171
Score = 57 (25.1 bits), Expect = 3.3e-18, Sum P(3) = 3.3e-18
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 30 NLQEANLDVIPSHS---NPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPI 85
+L E +L +P + ++ L L N+I ++ A L+ + L++ IP+
Sbjct: 139 DLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPV 198
Query: 86 GGFEPQEKLVELQLNHNKH 104
F KL +L H+ H
Sbjct: 199 SSFNHMPKLRTFRL-HSNH 216
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 279 (103.3 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 92/318 (28%), Positives = 147/318 (46%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P +Q+L L N I V + + +L+ +DLSH + F L L+L HN
Sbjct: 242 PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNA 301
Query: 104 --HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ + +++ G NRI ++ + FEGL L +L L+DNQ+ V +F
Sbjct: 302 ITSLRPRTFKDLHFLEELQL-GHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFG 360
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L +A + + N +L + F GLGRL +L L + L I + F GLSGLR L L DN
Sbjct: 361 LFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDN 420
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
+ SI + L+ L+ L EL++ N + L F+GL L+ L ++ + LT + +
Sbjct: 421 SISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSN-NQLTMLSEDVLG 479
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 341
E G L L +LNL+ N+ +F + P L + +
Sbjct: 480 PLQRAFWLDLSHNRLETPAE-GLFSSLGRLRYLNLRNNSLQTF----VPQPGLERLWLDA 534
Query: 342 NPIECGCNILWLREMLVR 359
NP +C C + LR+ ++
Sbjct: 535 NPWDCSCPLKALRDFALQ 552
Score = 263 (97.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 110/420 (26%), Positives = 174/420 (41%)
Query: 137 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 196
GL L L+L+ N LRS+ F + LA L +G N+ L +G F GL L L+L
Sbjct: 120 GLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGW 179
Query: 197 AGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 256
L + D F+GL L LVL N+L + L L L EL++ +N ++A F
Sbjct: 180 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFI 239
Query: 257 GLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNL 316
L L++L + + +T V AF +E+ GL L+ L L
Sbjct: 240 HLPRLQKLYLD-RNLITAVAPRAFLGMKALRWLDLSHNRVAGLLED-TFPGLLGLHVLRL 297
Query: 317 KENAFTSFS-ESMLAWPELRTIDIAENPI-ECGCNILWLREMLVRRNTSAVFCNSPAPLK 374
NA TS + L + + N I + G E L + + N +K
Sbjct: 298 AHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTF---EGLGQLEVLTLNDNQIHEVK 354
Query: 375 YKSLISL-SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 433
+ L + + +G L ++ ++ F+GL L SL L + L I + L+ L
Sbjct: 355 VGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRR 414
Query: 434 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXI 493
L + N S +E GLS L L++T A+ LT + + F +
Sbjct: 415 LFLRDNSISSIEEQSLAGLSELLELDLT-ANQLTHLPRQLF-QGLGQLEYLLLSNNQLTM 472
Query: 494 IEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIEC-----GCNILWL 547
+ ED L L + L+L N + +E + + LR +++ N ++ G LWL
Sbjct: 473 LSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTFVPQPGLERLWL 532
Score = 223 (83.6 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 105/401 (26%), Positives = 173/401 (43%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH 104
++ L L N ++++ + + + SL + L + + G F L +L L N
Sbjct: 123 NLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSL 182
Query: 105 --FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
P + + + + + G N+++ + A GL LR L L N LRSV FI+L
Sbjct: 183 VVLPDTVFQGLGNLHELVLAG-NKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHL 241
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L +L + N+ T +A AF G+ L LDL + + ++ F GL GL L L N
Sbjct: 242 PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNA 301
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
+ S+ + L LEEL++G N L F+GL L+ L + + + V+ GAF
Sbjct: 302 ITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLND-NQIHEVKVGAFFG 360
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAE 341
+ E GL L+ L+L+ + + LR + + +
Sbjct: 361 LFNVAVMNLSGNCLRS-LPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRD 419
Query: 342 NPIEC--GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
N I ++ L E+L T+ + P L ++ L L E L + LT +S++
Sbjct: 420 NSISSIEEQSLAGLSELLELDLTANQLTHLPRQL-FQGLGQL--EYLLLSNNQLTMLSED 476
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQL-SKLTRLEELEIGQN 439
L L L+ NRL++ P + L S L RL L + N
Sbjct: 477 VLGPLQRAFWLDLSHNRLET-PAEGLFSSLGRLRYLNLRNN 516
Score = 223 (83.6 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 112/460 (24%), Positives = 179/460 (38%)
Query: 114 ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
+S R + + G N +S I A F+ L++L L L + LRS+ + + L L L + N
Sbjct: 74 VSTRALWLDGNN-LSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERN 132
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
+ +LA G F L++L L L + + FRGLS L L L N L +P
Sbjct: 133 LLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQG 192
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXX 293
L L EL + N + L+ GL L+ L+++ + L V+ F
Sbjct: 193 LGNLHELVLAGNKLTYLQPALLCGLGELRELDLS-RNALRSVKANVFIHLPRLQKLYLDR 251
Query: 294 XXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILW 352
+ A +G+ L L+L N E L + +A N I
Sbjct: 252 NLITA-VAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHNAIT-SLRPRT 309
Query: 353 LREMLVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLV 411
+++ N L K+ L E L + + AF GL + +
Sbjct: 310 FKDLHFLEELQLGH-NRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMN 368
Query: 412 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 471
L+ N L+S+P L RL L + + + F GLS L+RL + S ++ + +
Sbjct: 369 LSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNS-ISSIEE 427
Query: 472 GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRT- 530
+ A + + GL L +L L N T SE +L P R
Sbjct: 428 QSLAGLSELLELDLTANQLTHLPRQ-LFQGLGQLEYLLLSNNQLTMLSEDVLG-PLQRAF 485
Query: 531 -IDIAENPIECGCNILW-----LREMLVRRNTSAVFCNSP 564
+D++ N +E L+ LR + +R N+ F P
Sbjct: 486 WLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTFVPQP 525
Score = 138 (53.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 45/161 (27%), Positives = 72/161 (44%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
L I + F GLSGLR L L DN + SI + L+ L+ L EL++ N + L F+GL
Sbjct: 398 LGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGL 457
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
L+ L ++ + LT + + E L L +LNL+
Sbjct: 458 GQLEYLLLSN-NQLTMLSEDVLGPLQRAFWLDLSHNRLETPAE-GLFSSLGRLRYLNLRN 515
Query: 513 NAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVR 553
N+ +F + P L + + NP +C C + LR+ ++
Sbjct: 516 NSLQTF----VPQPGLERLWLDANPWDCSCPLKALRDFALQ 552
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 49/176 (27%), Positives = 77/176 (43%)
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
+VFC+S + I +S L G L++I AF+ LS L L L + L+S+ +
Sbjct: 57 SVFCSSRNLTQLPDGIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQ 116
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
L L L L + +N L AG F+ L L + G + L R+ +G F
Sbjct: 117 ALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSL-GNNLLGRLEEGLFRGLSHLWDL 175
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPI 538
++ + GL NL+ L L N T ++L ELR +D++ N +
Sbjct: 176 NLGWNSLV-VLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNAL 230
>UNIPROTKB|F1MT22 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048839 "inner ear development" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:DAAA02012288 EMBL:DAAA02012284 EMBL:DAAA02012285
EMBL:DAAA02012286 EMBL:DAAA02012287 IPI:IPI00688410
UniGene:Bt.94743 ProteinModelPortal:F1MT22
Ensembl:ENSBTAT00000017631 NextBio:20873048 Uniprot:F1MT22
Length = 907
Score = 282 (104.3 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 108/407 (26%), Positives = 173/407 (42%)
Query: 33 EANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS--LQHVDLSHTTWLIIPIGGFEP 90
+ L +PS+ + L LS N I + + P++ L+ + L+ IP G F
Sbjct: 54 DLGLSELPSNLSVFTSYLDLSMNNISQLPPS-PLHSLRFLEELRLAGNALTYIPKGAFAG 112
Query: 91 --QEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDD 148
K++ LQ NH + P + + ++ S + + + NRIS + +CF GL +LR L+LDD
Sbjct: 113 LYSLKVLMLQNNHLRQVPTEALQNLRSLQSLRL-DANRISSVPPSCFSGLHSLRHLWLDD 171
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
N L +P +F L L + + LN + D AF L L L L + ++ F
Sbjct: 172 NALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFD 231
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
GL L +L L N L PT + L+ L+EL N + F G L +
Sbjct: 232 GLHSLETLDLNYNNLDEFPTA-VRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYD 290
Query: 269 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM 328
+ + V + AF + L G +L L L +S +++
Sbjct: 291 -NPIQLVGRSAFQHLPELRTLTLNGASQITEFPD--LTGTASLESLTLTGAQISSLPQTV 347
Query: 329 L-AWPELRTIDIAENPIEC--GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385
P L+ +D++ N +E ++ + + R+ + ++ L SL +
Sbjct: 348 CDQLPNLQVLDLSYNLLEDLPSFSVCQKLQKIDLRHNEIYEIQADT---FQQLFSLRS-- 402
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
L A + I NAF L LR L L+ NRL SIP L LT L+
Sbjct: 403 LNLAWNKIAIIDPNAFSTLPSLRKLDLSSNRLSSIPVTGLHGLTHLK 449
Score = 241 (89.9 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 98/376 (26%), Positives = 156/376 (41%)
Query: 95 VELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSV 154
++L +N+ P + S+ + + G N ++ I + F GL +L++L L +N LR V
Sbjct: 71 LDLSMNNISQLPPSPLHSLRFLEELRLAG-NALTYIPKGAFAGLYSLKVLMLQNNHLRQV 129
Query: 155 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLR 214
PT + L L LR+ N +++ F+GL L L L LT I AFR LS L+
Sbjct: 130 PTEALQNLRSLQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQ 189
Query: 215 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
++ L N++ IP L+ L L + N L CF GL L+ L++ +NL
Sbjct: 190 AMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLN-YNNLDE 248
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PE 333
I E A VG P+L ++ +N S PE
Sbjct: 249 FPTAV--RTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPE 306
Query: 334 LRTI------DIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLG 387
LRT+ I E P G L E L T A + P + L +L DL
Sbjct: 307 LRTLTLNGASQITEFPDLTGTASL---ESLTL--TGAQISSLPQTV-CDQLPNLQVLDLS 360
Query: 388 CAGAGLTNISDN--AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 445
N+ ++ +F L+ + L N + I +L L L + N ++++
Sbjct: 361 Y------NLLEDLPSFSVCQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAWNKIAIID 414
Query: 446 AGCFKGLSYLKRLEIT 461
F L L++L+++
Sbjct: 415 PNAFSTLPSLRKLDLS 430
Score = 192 (72.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 99/413 (23%), Positives = 164/413 (39%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N IS++ + L L L L N L +P +F L L L + N + A
Sbjct: 76 NNISQLPPSPLHSLRFLEELRLAGNALTYIPKGAFAGLYSLKVLMLQNNHLRQVPTEALQ 135
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L +L L ++++ + F GL LR L L DN L IP + L+ L+ + +
Sbjct: 136 NLRSLQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLAL 195
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + F LS L L + + + + K F D A
Sbjct: 196 NKIHHIPDYAFGNLSSLVVLHLHN-NRIHSLGKKCF-DGLHSLETLDLNYNNLDEFPT-A 252
Query: 305 LVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTS 363
+ L NL L N S E + + P L TI +NPI+ + + L T
Sbjct: 253 VRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAF--QHLPELRTL 310
Query: 364 AVFCNSPAPL-KYKSLI-SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 421
+ N + + ++ L + S E L GA ++++ L L+ L L+ N L+ +P
Sbjct: 311 TL--NGASQITEFPDLTGTASLESLTLTGAQISSLPQTVCDQLPNLQVLDLSYNLLEDLP 368
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 481
+ S +L+++++ N ++A F+ L L+ L + + + + AF+
Sbjct: 369 S--FSVCQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAW-NKIAIIDPNAFSTLPSLR 425
Query: 482 XXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN-AFTSFSESMLAWPELRTIDI 533
I + GL L HL L N A S S +PEL+ I++
Sbjct: 426 KLDLSSNRLSSI----PVTGLHGLTHLKLTGNHALQSLISSE-NFPELKVIEM 473
Score = 162 (62.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 90/362 (24%), Positives = 140/362 (38%)
Query: 187 GR-LSALDLRGAGLTNISDNAFRGLSGLRS-LVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GR L +D GL+ + N LS S L L+ N + +P L L LEEL +
Sbjct: 44 GRMLLRVDCSDLGLSELPSN----LSVFTSYLDLSMNNISQLPPSPLHSLRFLEELRLAG 99
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + + G F GL LK L + ++L +V A + +
Sbjct: 100 NALTYIPKGAFAGLYSLKVLMLQN-NHLRQVPTEALQNLRSLQSLRLDANRISS-VPPSC 157
Query: 305 LVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILW--LREMLVRR- 360
GL +L HL L +NA T ++ + L+ + +A N I + + L ++V
Sbjct: 158 FSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHL 217
Query: 361 NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISD--NAFRGLSGLRSLVLTDNRLQ 418
+ + + +S + L SL DL N+ + A R LS L+ L N ++
Sbjct: 218 HNNRI--HSLGKKCFDGLHSLETLDLN-----YNNLDEFPTAVRTLSNLKELGFHSNNIK 270
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
SIP K L + N ++ F+ L L+ L + GAS +T F D
Sbjct: 271 SIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRTLTLNGASQITE-----FPDLT 325
Query: 479 XXXXXXXXXXXXXXI--IEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAEN 536
I + + LPNL L+L N S +L+ ID+ N
Sbjct: 326 GTASLESLTLTGAQISSLPQTVCDQLPNLQVLDLSYNLLEDLP-SFSVCQKLQKIDLRHN 384
Query: 537 PI 538
I
Sbjct: 385 EI 386
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 88/354 (24%), Positives = 149/354 (42%)
Query: 4 DAGQELRSKCMNPYEPSRFSTRDPSC-----NLQEANLD-----VIPSH---SNPSIQRL 50
+A Q LRS + +R S+ PSC +L+ LD IP S ++Q +
Sbjct: 132 EALQNLRSLQSLRLDANRISSVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAM 191
Query: 51 VLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQ 107
L+ N+I + D A SL + L + + F+ L L LN+N FP
Sbjct: 192 TLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT 251
Query: 108 QIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 167
+ +S + F N I I + F G +L ++ DN ++ V +F +L L
Sbjct: 252 AV--RTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPELRT 309
Query: 168 LRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 226
L + G + T D G L +L L GA ++++ L L+ L L+ N L+ +
Sbjct: 310 LTLNGASQITEFPD--LTGTASLESLTLTGAQISSLPQTVCDQLPNLQVLDLSYNLLEDL 367
Query: 227 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 286
P+ S +L+++++ N ++A F+ L L+ L + + + + AF+
Sbjct: 368 PS--FSVCQKLQKIDLRHNEIYEIQADTFQQLFSLRSLNLAW-NKIAIIDPNAFS----T 420
Query: 287 XXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN-AFTSFSESMLAWPELRTIDI 339
+ + GL L HL L N A S S +PEL+ I++
Sbjct: 421 LPSLRKLDLSSNRLSSIPVTGLHGLTHLKLTGNHALQSLISSE-NFPELKVIEM 473
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 281 (104.0 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 93/352 (26%), Positives = 154/352 (43%)
Query: 46 SIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEK-LVELQLNHNK 103
S++ L LS+N I + S P L ++ ++L+ I+ G F+ + L+ L+L+ N+
Sbjct: 142 SLEVLDLSSNNITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNR 201
Query: 104 HFPQQIVCSIISPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
Q V + PR ++ +NRI I+ F+GL +L +L L N + + +F L
Sbjct: 202 -ITQLPVKAFKLPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGL 260
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
+ L + N + G+ GL L L L ++ I + + L L+L+ N
Sbjct: 261 SKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNN 320
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI--TGASNLTRVRKGAF 280
L + + L++L+ L L + N S + G FKGL L+ L++ S GAF
Sbjct: 321 LTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAF 380
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDI 339
+ + A GL +L HLNL ENA S ++ L+ + I
Sbjct: 381 TGLDNLSKLTLFGNKIKS-VAKRAFSGLESLEHLNLGENAIRSVQFDAFAKMKNLKELYI 439
Query: 340 AENPIECGCNILWLREMLVRRNTSAVF---CNSPAPLKYKSLISLSAEDLGC 388
+ C C + WL L+ R A C P LK +S+ S+ + C
Sbjct: 440 SSESFLCDCQLKWLPPWLMGRMLQAFVTATCAHPESLKGQSIFSVLPDSFVC 491
Score = 239 (89.2 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 91/331 (27%), Positives = 154/331 (46%)
Query: 144 LYLDDNQLRSVPTPSF-IYLGMLAELRVGLNVFTTLADGAF-NGLGRLSALDLRGAGLTN 201
L+L N++ SV YL L L + N T + F NGL R+ L+L ++
Sbjct: 122 LFLQHNKILSVDGSQLKSYLS-LEVLDLSSNNITEIRSSCFPNGL-RIRELNLASNRISI 179
Query: 202 ISDNAFRGLS-GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 260
+ AF GLS L +L L+ NR+ +P K KL RL +L++ +N ++E F+GL
Sbjct: 180 LESGAFDGLSRSLLTLRLSKNRITQLPVKAF-KLPRLTQLDLNRNRIRLIEGLTFQGLDS 238
Query: 261 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENA 320
L+ L + +N++R+ GAF + G+L GL L+ L+L N+
Sbjct: 239 LEVLRLQ-RNNISRLTDGAFWGLSKMHVLHLEYNSLVE-VNSGSLYGLTALHQLHLSNNS 296
Query: 321 FTSFSESMLAW-PELRTIDIAENPIEC--GCNILWLREM-LVRRNTSAVFCNSPAPLKYK 376
+ ++ +L + ++ N + ++ L + ++R + +A+ + A +K
Sbjct: 297 ISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAI--SHIAEGAFK 354
Query: 377 SLISLSAEDLGCAG-AGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 435
L SL DL +G + AF GL L L L N+++S+ + S L LE L
Sbjct: 355 GLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLN 414
Query: 436 IGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
+G+N ++ F + LK L I+ S L
Sbjct: 415 LGENAIRSVQFDAFAKMKNLKELYISSESFL 445
Score = 239 (89.2 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 100/418 (23%), Positives = 160/418 (38%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N + + AF L L + L LT I + G+ SL L N++ S+
Sbjct: 75 LNLSYNRLSEIDSAAFEDLTNLQEVYLNSNELTAIPSLGAASI-GVVSLFLQHNKILSVD 133
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN-LTRVRKGAFADXXXX 286
QL LE L++ N + + + CF ++ L + ASN ++ + GAF
Sbjct: 134 GSQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRIRELNL--ASNRISILESGAFDGLSRS 191
Query: 287 XXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIE 345
+ A LP L L+L N + L + + N I
Sbjct: 192 LLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNIS 250
Query: 346 -CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRG 403
W L + + + NS + SL L+A L + ++ I + +
Sbjct: 251 RLTDGAFW---GLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSF 307
Query: 404 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI--T 461
L L+L+ N L + + L++L+ L L + N S + G FKGL L+ L++
Sbjct: 308 CQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHN 367
Query: 462 GASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-E 520
S GAF + + A GL +L HLNL ENA S +
Sbjct: 368 EISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKR-AFSGLESLEHLNLGENAIRSVQFD 426
Query: 521 SMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF---CNSPAPLKYKSLISL 575
+ L+ + I+ C C + WL L+ R A C P LK +S+ S+
Sbjct: 427 AFAKMKNLKELYISSESFLCDCQLKWLPPWLMGRMLQAFVTATCAHPESLKGQSIFSV 484
Score = 225 (84.3 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 91/358 (25%), Positives = 156/358 (43%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
NR+S ID A FE LT L+ +YL+ N+L ++P+ +G+++ L + N ++
Sbjct: 80 NRLSEIDSAAFEDLTNLQEVYLNSNELTAIPSLGAASIGVVS-LFLQHNKILSVDGSQLK 138
Query: 185 GLGRLSALDLRGAGLTNISDNAF-RGLSGLRSLVLTDNRLQSIPTKQLSKLTR-LEELEI 242
L LDL +T I + F GL +R L L NR+ + + L+R L L +
Sbjct: 139 SYLSLEVLDLSSNNITEIRSSCFPNGLR-IRELNLASNRISILESGAFDGLSRSLLTLRL 197
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
+N + L FK L L +L++ N R+ +G + +
Sbjct: 198 SKNRITQLPVKAFK-LPRLTQLDLN--RNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTD 254
Query: 303 GALVGLPNLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRN 361
GA GL ++ L+L+ N+ S S+ L + ++ N I W + +
Sbjct: 255 GAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSISRIQRDGW--SFCQKLH 312
Query: 362 TSAVFCNSPAPLKYKSLISLSAED-LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
+ N+ L +SL LS+ L + +++I++ AF+GL LR L L N +
Sbjct: 313 ELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGT 372
Query: 421 ---PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
+ + L L +L + N + F GL L+ L + G + + V+ AFA
Sbjct: 373 IEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNL-GENAIRSVQFDAFA 429
Score = 223 (83.6 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 94/328 (28%), Positives = 146/328 (44%)
Query: 30 NLQEANLD-----VIPSHSNPSIQ--RLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWL 81
NLQE L+ IPS SI L L N+I +VD S + YLSL+ +DLS
Sbjct: 95 NLQEVYLNSNELTAIPSLGAASIGVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNIT 154
Query: 82 IIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEI-FGQNRISRIDQACFEGLT 139
I F ++ EL L N+ + +S + + +NRI+++ F+ L
Sbjct: 155 EIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAFK-LP 213
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
L L L+ N++R + +F L L LR+ N + L DGAF GL ++ L L L
Sbjct: 214 RLTQLDLNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSL 273
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
++ + GL+ L L L++N + I S +L EL + N + L+ LS
Sbjct: 274 VEVNSGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELS 333
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE--GALVGLPNLYHLNLK 317
L L ++ + ++ + +GAF IE+ GA GL NL L L
Sbjct: 334 SLSILRLSHNA-ISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLF 392
Query: 318 ENAFTSFSESMLAWPE-LRTIDIAENPI 344
N S ++ + E L +++ EN I
Sbjct: 393 GNKIKSVAKRAFSGLESLEHLNLGENAI 420
Score = 189 (71.6 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 84/307 (27%), Positives = 133/307 (43%)
Query: 45 PSIQR-LVLSTNRIKTVDSA-IPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN 102
PS R L LS NR+ +DSA +LQ V L+ IP G +V L L HN
Sbjct: 69 PSWTRSLNLSYNRLSEIDSAAFEDLTNLQEVYLNSNELTAIPSLG-AASIGVVSLFLQHN 127
Query: 103 KHFP---QQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 159
K Q+ S +S +++ N I+ I +CF +R L L N++ + + +F
Sbjct: 128 KILSVDGSQLK-SYLSLEVLDL-SSNNITEIRSSCFPNGLRIRELNLASNRISILESGAF 185
Query: 160 IYLGM-LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVL 218
L L LR+ N T L AF L RL+ LDL + I F+GL L L L
Sbjct: 186 DGLSRSLLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRNRIRLIEGLTFQGLDSLEVLRL 244
Query: 219 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
N + + L+++ L + N + +G GL+ L +L ++ S ++R+++
Sbjct: 245 QRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNS-ISRIQRD 303
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTI 337
++ ++E +L L +L L L NA + +E LR +
Sbjct: 304 GWS-FCQKLHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVL 362
Query: 338 DIAENPI 344
D+ N I
Sbjct: 363 DLDHNEI 369
Score = 136 (52.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 86/340 (25%), Positives = 134/340 (39%)
Query: 191 ALDLRGAGLTNISDNAFRGL-SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 249
+LD G GL + R L S RSL L+ NRL I + LT L+E+ + N +
Sbjct: 53 SLDCSGRGLATLP----RDLPSWTRSLNLSYNRLSEIDSAAFEDLTNLQEVYLNSNELTA 108
Query: 250 LEA-GCFK-G-----LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
+ + G G L + K L + G S L D +
Sbjct: 109 IPSLGAASIGVVSLFLQHNKILSVDG-SQLKSYLSLEVLDLSSNNITEIRSSCFPNGLRI 167
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNT 362
L N + L+ AF S S+L L I + P++ + L ++ + RN
Sbjct: 168 RELNLASNRISI-LESGAFDGLSRSLLTL-RLSKNRITQLPVKA-FKLPRLTQLDLNRNR 224
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
+ L ++ L SL E L ++ ++D AF GLS + L L N L + +
Sbjct: 225 IRLI----EGLTFQGLDSL--EVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNS 278
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE--ITGASNLTRVRKGAFADXXXX 480
L LT L +L + N S ++ G S+ ++L I +NLTR+ + + A+
Sbjct: 279 GSLYGLTALHQLHLSNNSISRIQRD---GWSFCQKLHELILSFNNLTRLDEESLAELSSL 335
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE 520
I E A GL +L L+L N + E
Sbjct: 336 SILRLSHNAISHIAE-GAFKGLKSLRVLDLDHNEISGTIE 374
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 226 (84.6 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 92/401 (22%), Positives = 168/401 (41%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL-SKLTRLEELEIGQNGFS 248
S ++ G L+ I + + + LR L +N + + L KL+ L+++ + N S
Sbjct: 408 SVVECSGLKLSKIPERIPQSTTELR---LNNNEISILEATGLFKKLSHLKKINLSNNKVS 464
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+E G F+G + + L +T A+ L VR G F I + GL
Sbjct: 465 EIEDGTFEGATSVSELHLT-ANQLESVRSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGL 522
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAV 365
N+ L+L +N T+ S L T+++ NP C C + WL + L +R T
Sbjct: 523 RNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNP 582
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNIS----DNAFRGLSGLRSLVLTDNR-LQSI 420
C +P L+ L ++ D C G + + + L ++V N+ LQ++
Sbjct: 583 RCQNPDFLRQIPLQDVAFPDFRCE-EGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQAL 641
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 480
P K + K + EL + N F+++ G YL+ ++++ + ++ + +F +
Sbjct: 642 P-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NKISSLSNSSFTNMSQL 696
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
I A GL +L L+L N ++ E + A L + I NP+
Sbjct: 697 TTLILSYNALQ-CIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLY 755
Query: 540 CGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAE 578
C C++ WL + + C P ++ K L++ A+
Sbjct: 756 CDCHLRWLSSWVKTGYKEPGIARCAGPPEMEGKLLLTTPAK 796
Score = 207 (77.9 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 92/372 (24%), Positives = 150/372 (40%)
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 277
L N+LQ +P L L++ +N + F+G + LK L++ + ++ + +
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLD-KNQISCIEE 60
Query: 278 GAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE--LR 335
GAF I + +P L L N F + LAW LR
Sbjct: 61 GAFR-ALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL--FCDCHLAWLSQWLR 117
Query: 336 ---TIDI---AENPIEC-GCNILWLREMLVRRNTSAVFCNSPA-PLKYKS---LISLSAE 384
TI + P G N+ +++ + PA L S + S S
Sbjct: 118 QRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSNG 177
Query: 385 DLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
+ C G GLT I N ++ +R L L N ++SIP S +L +++ N + +
Sbjct: 178 IVDCRGKGLTAIPANLPETMTEIR-LEL--NGIKSIPPGAFSPYRKLRRIDLSNNQIAEI 234
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
F+GL L L + G + +T + +G F I DA L N
Sbjct: 235 APDAFQGLRSLNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNANKIN-CIRPDAFQDLQN 292
Query: 505 LYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVF 560
L L+L +N S ++ + + ++T+ +A+NP C CN+ WL + L R N T+
Sbjct: 293 LSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFL-RTNPIETTGAR 351
Query: 561 CNSPAPLKYKSL 572
C SP L K +
Sbjct: 352 CASPRRLANKRI 363
Score = 179 (68.1 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 87/354 (24%), Positives = 137/354 (38%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I I F LR + L +NQ+ + +F L L L + N T L G F
Sbjct: 205 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 264
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L + I +AF+ L L L L DN++QS+ + L ++ L + Q
Sbjct: 265 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 324
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N F C L +L T T R + +E
Sbjct: 325 NPFI-----CDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQIKSKKFRCSAKEQY 379
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNTS 363
+ YHLN S S +A P + + +EC G + + E + + T
Sbjct: 380 FIPGTEDYHLN-------SECTSDVACPHKCRCEASV--VECSGLKLSKIPERIPQSTTE 430
Query: 364 AVFCNSPAP-LKYKSLIS-LS-AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
N+ L+ L LS + + + ++ I D F G + + L LT N+L+S+
Sbjct: 431 LRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESV 490
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ L L L + N S + F GL ++ L + +++T + GAF
Sbjct: 491 RSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYD-NHITTISPGAF 543
Score = 171 (65.3 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 56/217 (25%), Positives = 92/217 (42%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL- 425
C S +K S + C+G L+ I + + + LR L +N + + L
Sbjct: 393 CTSDVACPHKCRCEASVVE--CSGLKLSKIPERIPQSTTELR---LNNNEISILEATGLF 447
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
KL+ L+++ + N S +E G F+G + + L +T A+ L VR G F
Sbjct: 448 KKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLT-ANQLESVRSGMFRGLDGLRTLML 506
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
I D+ GL N+ L+L +N T+ S L T+++ NP C C +
Sbjct: 507 RNNRIS-CIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQL 565
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL + L +R T C +P L+ L ++ D
Sbjct: 566 AWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPD 602
Score = 145 (56.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTT 177
VE G ++S+I + + T LR L++N++ + T F L L ++ + N +
Sbjct: 410 VECSGL-KLSKIPERIPQSTTELR---LNNNEISILEATGLFKKLSHLKKINLSNNKVSE 465
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ DG F G +S L L L ++ FRGL GLR+L+L +NR+ I + L +
Sbjct: 466 IEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNV 525
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L + N + + G F L L L +
Sbjct: 526 RLLSLYDNHITTISPGAFDTLQALSTLNL 554
Score = 130 (50.8 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ LN ++ GAF+ +L +DL + I+ +AF+GL L SLVL N++
Sbjct: 197 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 256
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+P L L+ L + N + + F+ L L L + + + + KG F
Sbjct: 257 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYD-NKIQSLAKGTF 311
Score = 123 (48.4 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 37/131 (28%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 195 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 251
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T++ F GL L+ L+L N++ I L L L + N L G F
Sbjct: 252 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 311
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 312 TSLRAIQTLHL 322
Score = 123 (48.4 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 90 PQEKLVELQLNHNKHFPQQ---IVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
PQ EL+LN+N+ + + + +++ + N++S I+ FEG T++ L+L
Sbjct: 425 PQST-TELRLNNNEISILEATGLFKKLSHLKKINL-SNNKVSEIEDGTFEGATSVSELHL 482
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
NQL SV + F L L L + N + + + +F GL + L L +T IS A
Sbjct: 483 TANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGA 542
Query: 207 FRGLSGLRSLVLTDN 221
F L L +L L N
Sbjct: 543 FDTLQALSTLNLLAN 557
Score = 116 (45.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L G + L +DL ++++S+++F +S L +L+L+ N LQ
Sbjct: 649 VTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 707
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L L L + N S L+ G F ++ L L I GA+ L
Sbjct: 708 CIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAI-GANPL 754
Score = 108 (43.1 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ AL L L +N L++VP +F L L++ N + + +GAF
Sbjct: 4 RNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAF 63
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L +T I ++F + LR+ L N L
Sbjct: 64 RALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 103
Score = 104 (41.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 41/182 (22%), Positives = 79/182 (43%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ LQ++P K + K + EL + N F+++ G YL+ ++++ +
Sbjct: 627 LDTVVRCSNKHLQALP-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NK 681
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA- 330
++ + +F + I A GL +L L+L N ++ E + A
Sbjct: 682 ISSLSNSSFTNMSQLTTLILSYNALQC-IPPLAFQGLRSLRLLSLHGNDVSTLQEGIFAD 740
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
L + I NP+ C C++ WL + + C P ++ K L++ A+ C
Sbjct: 741 VTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFEC 800
Query: 389 AG 390
G
Sbjct: 801 QG 802
Score = 103 (41.3 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 39/160 (24%), Positives = 72/160 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSH 77
P+ S + + + L IP++ ++ + L N IK++ A Y L+ +DLS+
Sbjct: 169 PAMCSCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSN 228
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I F+ L L L NK P+ + + + + + + N+I+ I F
Sbjct: 229 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLL-LLNANKINCIRPDAF 287
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ L L +L L DN+++S+ +F L + L + N F
Sbjct: 288 QDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPF 327
Score = 103 (41.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 29/100 (29%), Positives = 45/100 (45%)
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L+ NQL+ +P F L+ L + N + AF G L L L ++ I +
Sbjct: 2 LNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEG 61
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
AFR L GL L L +N + +IP + + +L + N
Sbjct: 62 AFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSN 101
Score = 100 (40.3 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 41/144 (28%), Positives = 63/144 (43%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQH---VDLSHTTWLIIPIGGFEPQE 92
L IP S L L+ N I ++ A ++ L H ++LS+ I G FE
Sbjct: 417 LSKIPERIPQSTTELRLNNNEISILE-ATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAT 475
Query: 93 KLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQL 151
+ EL L N+ + + + R + NRIS I F GL +R+L L DN +
Sbjct: 476 SVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHI 535
Query: 152 RSVPTPSFIYLGMLAELRVGLNVF 175
++ +F L L+ L + N F
Sbjct: 536 TTISPGAFDTLQALSTLNLLANPF 559
Score = 89 (36.4 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 26/98 (26%), Positives = 40/98 (40%)
Query: 169 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 228
R+ N L + F LS LDL L + AFRG + L++L L N++ I
Sbjct: 1 RLNRNQLQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEE 60
Query: 229 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L LE L + N + + F + L+ +
Sbjct: 61 GAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 98
Score = 75 (31.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 58/233 (24%), Positives = 91/233 (39%)
Query: 69 SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVC----SIISPRRVEIF-- 122
+L +DLS + +P F L LQL+ N QI C + + R +E+
Sbjct: 20 ALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKN-----QISCIEEGAFRALRGLEVLTL 74
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQL-------------RSVPTPS-FIYLGMLAEL 168
N I+ I + F + LR L N L R PT F A L
Sbjct: 75 NNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASL 134
Query: 169 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR-LQSIP 227
R GLNV + F+ G+ A + L++ S A S +V + L +IP
Sbjct: 135 R-GLNV-AEVQKSEFSCSGQGEAAQVPACTLSSGSCPAMCSCSN--GIVDCRGKGLTAIP 190
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+T + LE+ NG + G F L+R++++ + + + AF
Sbjct: 191 ANLPETMTEIR-LEL--NGIKSIPPGAFSPYRKLRRIDLSN-NQIAEIAPDAF 239
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 225 (84.3 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 97/382 (25%), Positives = 165/382 (43%)
Query: 177 TLADGAFNGLGRLS--ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
TL+ G+ + S +D RG GLT I N ++ +R L N ++SIP S
Sbjct: 140 TLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPETMTEIR---LELNGIKSIPPGAFSPY 196
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 294
+L +++ N S + F+GL L L + G + +T + +G F
Sbjct: 197 RKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG-NKITDLPRGVFGGLFTLQLLLLNAN 255
Query: 295 XXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWL 353
+ A L NL L+L +N ++ + + ++T+ +A+NP C CN LWL
Sbjct: 256 KINC-VRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLHLAQNPFICDCN-LWL 313
Query: 354 REMLVRRN---TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGL-SGLRS 409
+ L R N TS C SP L K + + ++ C+G I L S S
Sbjct: 314 ADFL-RTNPIETSGARCASPRRLANKRIGQIKSKKFRCSGQEQYFIPGTEDYQLNSECNS 372
Query: 410 LVLTDNRLQ---SI---PTKQLSKLT-RLE----ELEIGQNGFSMLEA-GCFKGLSYLKR 457
V+ ++ + S+ + +LSK+ R+ EL + N S+LEA G FK L++LK+
Sbjct: 373 DVVCPHKCRCEASVVECSSLKLSKIPERIPQATAELRLNNNEISILEATGMFKKLTHLKK 432
Query: 458 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTS 517
+ ++ + ++ + GAF + I GL L L L+ N +
Sbjct: 433 INLSN-NKVSEIEDGAF-EGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISC 490
Query: 518 F-SESMLAWPELRTIDIAENPI 538
++S +R + + +N I
Sbjct: 491 IHNDSFTGLRNVRLLSLYDNQI 512
Score = 222 (83.2 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 92/400 (23%), Positives = 164/400 (41%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFS 248
S ++ L+ I + + + LR L +N + + T KLT L+++ + N S
Sbjct: 385 SVVECSSLKLSKIPERIPQATAELR---LNNNEISILEATGMFKKLTHLKKINLSNNKVS 441
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+E G F+G + + L +T A+ L +R G F I + GL
Sbjct: 442 EIEDGAFEGAASVSELHLT-ANQLESIRSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGL 499
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAV 365
N+ L+L +N + S L T+++ NP C C + WL + L +R T
Sbjct: 500 RNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNP 559
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGA---GLTNISDNAFRGLSGLRSLVLTDNR-LQSIP 421
C +P L+ L ++ D C G + + L ++V N+ LQ++P
Sbjct: 560 RCQNPDFLRQIPLQDVAFPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQALP 619
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 481
K + K + EL + N F ML G YL+ ++++ + ++ + +F +
Sbjct: 620 -KGIPK--NVTELYLDGNQF-MLVPGQLSTFKYLQLVDLSN-NKISSLSNSSFTNMSQLT 674
Query: 482 XXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIEC 540
I A GL +L L+L N ++ E + A L + I NP+ C
Sbjct: 675 TLILSYNALQ-CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYC 733
Query: 541 GCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAE 578
C++ WL + + C P ++ K L++ A+
Sbjct: 734 DCHLRWLSGWVKTGYKEPGIARCAGPPDMEGKLLLTTPAK 773
Score = 173 (66.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 84/349 (24%), Positives = 139/349 (39%)
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
++ +N + F+G + LK L++ + ++ + +GAF I
Sbjct: 3 DLSENTIQAIPRKAFRGATDLKNLQLD-KNQISCIEEGAFR-ALRGLEVLTLNNNNISTI 60
Query: 301 EEGALVGLPNLYHLNLKENAFTSFSESMLAWPE--LR---TIDI---AENPIEC-GCNIL 351
+ +P L L N F + LAW LR TI + P G N+
Sbjct: 61 PVSSFNHMPKLRTFRLHSNHL--FCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVA 118
Query: 352 WLREMLVRRNTSAVFCNSPA-PLKYKSLISLSAEDLG---CAGAGLTNISDNAFRGLSGL 407
+++ + P+ L S ++ A G C G GLT I N ++ +
Sbjct: 119 EVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPETMTEI 178
Query: 408 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 467
R L N ++SIP S +L +++ N S + F+GL L L + G + +T
Sbjct: 179 R---LELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG-NKIT 234
Query: 468 RVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWP 526
+ +G F + DA L NL L+L +N ++ + +
Sbjct: 235 DLPRGVFGGLFTLQLLLLNANKIN-CVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLR 293
Query: 527 ELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPLKYKSL 572
++T+ +A+NP C CN LWL + L R N TS C SP L K +
Sbjct: 294 AIQTLHLAQNPFICDCN-LWLADFL-RTNPIETSGARCASPRRLANKRI 340
Score = 172 (65.6 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 55/217 (25%), Positives = 91/217 (41%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQL 425
CNS +K S + C+ L+ I + + + LR L +N + + T
Sbjct: 370 CNSDVVCPHKCRCEASVVE--CSSLKLSKIPERIPQATAELR---LNNNEISILEATGMF 424
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
KLT L+++ + N S +E G F+G + + L +T A+ L +R G F
Sbjct: 425 KKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT-ANQLESIRSGMFRGLDGLRTLML 483
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
I D+ GL N+ L+L +N + S L T+++ NP C C +
Sbjct: 484 RNNRIS-CIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQL 542
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL + L +R T C +P L+ L ++ D
Sbjct: 543 AWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPD 579
Score = 145 (56.1 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFN 184
++S+I + + LR L++N++ + T F L L ++ + N + + DGAF
Sbjct: 393 KLSKIPERIPQATAELR---LNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFE 449
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
G +S L L L +I FRGL GLR+L+L +NR+ I + L + L +
Sbjct: 450 GAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYD 509
Query: 245 NGFSMLEAGCFKGLSYLKRLEI 266
N + + G F L L L +
Sbjct: 510 NQIATISPGAFDTLQALSTLNL 531
Score = 129 (50.5 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 33/116 (28%), Positives = 58/116 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ LN ++ GAF+ +L +DL ++ I+ +AF+GL L SLVL N++
Sbjct: 175 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKIT 234
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+P L L+ L + N + + F+ L L L + + + + KG F
Sbjct: 235 DLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYD-NKIQGLAKGTF 289
Score = 129 (50.5 bits), Expect = 0.00022, P = 0.00022
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ LT L+ + L +N++ + +F ++EL + N ++ G F
Sbjct: 413 NEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMF 472
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ I +++F GL +R L L DN++ +I L L L +
Sbjct: 473 RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLL 532
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITG 268
N F+ + G KR +TG
Sbjct: 533 ANPFNCNCQLAWLGDWLRKRKIVTG 557
Score = 126 (49.4 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 37/123 (30%), Positives = 54/123 (43%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I I F LR + L +NQ+ + +F L L L + N T L G F
Sbjct: 183 NGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 242
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L + + +AF+ L L L L DN++Q + + L ++ L + Q
Sbjct: 243 GLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTFTSLRAIQTLHLAQ 302
Query: 245 NGF 247
N F
Sbjct: 303 NPF 305
Score = 121 (47.7 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
E +T +R L+ N ++S+P +F L + + N + +A AF GL L++L L
Sbjct: 173 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY 229
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T++ F GL L+ L+L N++ + L L L + N L G F
Sbjct: 230 GNKITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQGLAKGTF 289
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 290 TSLRAIQTLHL 300
Score = 111 (44.1 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N F L G + L +DL ++++S+++F +S L +L+L+ N LQ
Sbjct: 626 VTELYLDGNQFM-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 684
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L L L + N S L+ G F ++ L L I GA+ L
Sbjct: 685 CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAI-GANPL 731
Score = 106 (42.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 43/182 (23%), Positives = 78/182 (42%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ LQ++P K + K + EL + N F ML G YL+ ++++ +
Sbjct: 604 LDTVVRCSNKHLQALP-KGIPK--NVTELYLDGNQF-MLVPGQLSTFKYLQLVDLSN-NK 658
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA- 330
++ + +F + I A GL +L L+L N ++ E + A
Sbjct: 659 ISSLSNSSFTNMSQLTTLILSYNALQC-IPPLAFQGLRSLRLLSLHGNDISTLQEGIFAD 717
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
L + I NP+ C C++ WL + + C P ++ K L++ A+ C
Sbjct: 718 VTSLSHLAIGANPLYCDCHLRWLSGWVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFEC 777
Query: 389 AG 390
G
Sbjct: 778 QG 779
Score = 103 (41.3 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 45/173 (26%), Positives = 72/173 (41%)
Query: 8 ELRSKCMNPYE-PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI 66
+L S+C + P + L IP + L L+ N I ++ A +
Sbjct: 365 QLNSECNSDVVCPHKCRCEASVVECSSLKLSKIPERIPQATAELRLNNNEISILE-ATGM 423
Query: 67 YLSLQH---VDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIF 122
+ L H ++LS+ I G FE + EL L N+ + + + R +
Sbjct: 424 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLML 483
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
NRIS I F GL +R+L L DNQ+ ++ +F L L+ L + N F
Sbjct: 484 RNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPF 536
Score = 97 (39.2 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP++ ++ + L N IK++ A Y L+ +DLS+ I F+ L
Sbjct: 164 LTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSL 223
Query: 95 VELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L L NK P+ + + + + + + N+I+ + F+ L L +L L DN+++
Sbjct: 224 NSLVLYGNKITDLPRGVFGGLFTLQLL-LLNANKINCVRPDAFQDLQNLSLLSLYDNKIQ 282
Query: 153 SVPTPSFIYLGMLAELRVGLNVF 175
+ +F L + L + N F
Sbjct: 283 GLAKGTFTSLRAIQTLHLAQNPF 305
Score = 88 (36.0 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N + AF G L L L ++ I + AFR L GL L L +N + +IP +
Sbjct: 7 NTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFN 66
Query: 233 KLTRLEELEIGQN 245
+ +L + N
Sbjct: 67 HMPKLRTFRLHSN 79
Score = 86 (35.3 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 277
L++N +Q+IP K T L+ L++ +N S +E G F+ L L+ L + +N++ +
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNN-NNISTIPV 62
Query: 278 GAF 280
+F
Sbjct: 63 SSF 65
Score = 83 (34.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L +N ++++P +F L L++ N + + +GAF L L L L ++ I +
Sbjct: 4 LSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVS 63
Query: 206 AFRGLSGLRSLVLTDNRL 223
+F + LR+ L N L
Sbjct: 64 SFNHMPKLRTFRLHSNHL 81
Score = 80 (33.2 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
+N+IS I++ F L L +L L++N + ++P SF ++ L R+ N
Sbjct: 30 KNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHSN 79
Score = 80 (33.2 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I + F G T L+ L LD NQ+ + +F L L L + N +T+ +F
Sbjct: 6 ENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNISTIPVSSF 65
Query: 184 NGLGRLSALDL 194
N + +L L
Sbjct: 66 NHMPKLRTFRL 76
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 278 (102.9 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 102/421 (24%), Positives = 179/421 (42%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L ++ I AF+ L L L L N+LQ +P
Sbjct: 71 NNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
+L L++ +N + F+G++ +K L++ ++++ + GAF
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDN-NHISCIEDGAFR-ALRDLEILTL 188
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-----PELRTID---IAENPI 344
I + +P + L L N + + LAW + RTI + P+
Sbjct: 189 NNNNISRILVTSFNHMPKIRTLRLHSNHL--YCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 345 EC-GCNILWLRE---MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
G ++ +++ + ++ A CN+ + L S S S + C G GLT I N
Sbjct: 247 HLRGFSVADVQKKEYVCPGPHSEAPACNANS-LSCPSACSCSNNIVDCRGKGLTEIPANL 305
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
G+ +R L N ++SIP + +L+ ++I +N S + F+GL L L +
Sbjct: 306 PEGIVEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVL 362
Query: 461 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE 520
G + +T + KG F D + + L NL L+L +N + S+
Sbjct: 363 YG-NKITEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK 420
Query: 521 SMLA-WPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSLISLSA 577
+ A ++T+ +A+NP C C++ WL + L TS C+SP L K + + +
Sbjct: 421 GLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKS 480
Query: 578 E 578
+
Sbjct: 481 K 481
Score = 204 (76.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 75/291 (25%), Positives = 125/291 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL +T I+ F GL LR L L DN++ I L +LE L + +N +L
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L RL+++ + + + + AF IE+GA L +L
Sbjct: 126 ELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGVTGVKNLQLDNNHISC-IEDGAFRALRDL 183
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N + S P++RT+ + N + C C++ WL + L +R T F C
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCM 243
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
+P L+ S+ + ++ C G + NA LS S N + K L+++
Sbjct: 244 APVHLRGFSVADVQKKEYVCPGPHSEAPACNA-NSLS-CPSACSCSNNIVDCRGKGLTEI 301
Query: 429 TR-----LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ E+ + QN + AG F LKR++I+ + ++ + AF
Sbjct: 302 PANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDIS-KNQISDIAPDAF 351
Score = 188 (71.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 83/371 (22%), Positives = 144/371 (38%)
Query: 216 LVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L DN + + T KL L ++ + N + G F G + ++ L +TG N
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTG--NQLE 594
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPE 333
G + GL ++ L+L +N T+ S +
Sbjct: 595 TMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVS 654
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAG- 390
L TI++ NP C C++ WL L +R + C P LK + ++ +D C G
Sbjct: 655 LSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 714
Query: 391 -AGLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
+S + + ++V NR L ++P K + K + EL + N + +
Sbjct: 715 EENSCQLSPRCPEQCTCVETVVRCSNRGLHTLP-KGMPK--DVTELYLEGNHLTAVP--- 768
Query: 449 FKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
K LS ++L + SN ++ + F++ I A GL +L
Sbjct: 769 -KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR-CIPVHAFNGLRSLR 826
Query: 507 HLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNS 563
L L N +S E S L + + NP+ C C++ WL E + + C+S
Sbjct: 827 VLTLHGNDISSVPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEWIKAGYKEPGIARCSS 886
Query: 564 PAPLKYKSLIS 574
P + + L++
Sbjct: 887 PESMADRLLLT 897
Score = 176 (67.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 47/153 (30%), Positives = 74/153 (48%)
Query: 116 PRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
PR E +N I+RI + F GL LR+L+L+DNQ+ + +F L L LR+ N
Sbjct: 60 PRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKN 119
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L + F +L+ LDL + I AFRG++G+++L L +N + I
Sbjct: 120 KLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRA 179
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L LE L + N S + F + ++ L +
Sbjct: 180 LRDLEILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 163 (62.4 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 88/399 (22%), Positives = 149/399 (37%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
+ +I AF L+ + ++ N++ I L L L + N + + G F GL
Sbjct: 319 IKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGL 378
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
L+ L + A+ + +R F D I +G L ++ L+L +
Sbjct: 379 VSLQLL-LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGLFAPLQSIQTLHLAQ 436
Query: 319 NAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNT---SAVF-CNSPAPL 373
N F + L W L + +NPIE G R + +R + S F C+
Sbjct: 437 NPFVC--DCHLKW--LADY-LQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDY 491
Query: 374 K--YKS---LISLSAEDLGCAGAGLTNISDNAFRGLSGL----RSLVLTDNRLQSIP-TK 423
+ + S + + E C G + + R S L L L DN + + T
Sbjct: 492 RNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATG 551
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
KL L ++ + N + G F G + ++ L +TG N G
Sbjct: 552 IFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTG--NQLETMHGRMFRGLSGLKT 609
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGC 542
+ D GL ++ L+L +N T+ S + L TI++ NP C C
Sbjct: 610 LMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNC 669
Query: 543 NILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
++ WL L +R + C P LK + ++ +D
Sbjct: 670 HMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Score = 158 (60.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I +AE L +T I+ F GL LR L L DN++ I L +LE L + +
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N +L F+ L RL+++ + + + + AF IE+ A
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGVTGVKNLQLDNNHIS-CIEDGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L +L L L N + S P++RT+ + N + C C++ WL + L +R T
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTI 236
Query: 558 AVF--CNSPAPLKYKSLISLSAED 579
F C +P L+ S+ + ++
Sbjct: 237 GQFTLCMAPVHLRGFSVADVQKKE 260
Score = 146 (56.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
EG+ +R L+ N ++S+P +FI L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T I F GL L+ L+L N++ + L L L + N + G F
Sbjct: 364 GNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 424 APLQSIQTLHL 434
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 43/174 (24%), Positives = 75/174 (43%)
Query: 100 NHNKHFPQQIVCSIISPRRVEIFG------QNRISRIDQACFEGLTALRILYLDDNQLRS 153
++ F + ++ P + G ++SRI E T LR L+DN +
Sbjct: 490 DYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPSHLPEYTTDLR---LNDNDIAV 546
Query: 154 VP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
+ T F L L ++ + N + +GAF+G + L L G L + FRGLSG
Sbjct: 547 LEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSG 606
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L++L+L N + + + L+ + L + N + + G F L L + +
Sbjct: 607 LKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINL 660
Score = 127 (49.8 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 40/130 (30%), Positives = 58/130 (44%)
Query: 119 VEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
VEI QN I I F L+ + + NQ+ + +F L L L + N T
Sbjct: 310 VEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ G F+GL L L L + + N F+ L L L L DN+LQ+I + L +
Sbjct: 370 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSI 429
Query: 238 EELEIGQNGF 247
+ L + QN F
Sbjct: 430 QTLHLAQNPF 439
Score = 119 (46.9 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
RV N++S I++ F+ L L L L+ N+L+ +P F L L + N
Sbjct: 88 RVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQG 147
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ AF G+ + L L ++ I D AFR L L L L +N + I + + ++
Sbjct: 148 IPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKI 207
Query: 238 EELEIGQN 245
L + N
Sbjct: 208 RTLRLHSN 215
Score = 114 (45.2 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 43/179 (24%), Positives = 81/179 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSH 77
P++ + S + L +P + +RL L N I + L +L+ + L
Sbjct: 35 PTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLED 94
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
+I G F+ ++L L+LN NK P+ + S R+++ +N+I I + F
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDL-SENQIQGIPRKAF 153
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
G+T ++ L LD+N + + +F L L L + N + + +FN + ++ L L
Sbjct: 154 RGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 106 (42.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 40/160 (25%), Positives = 72/160 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI-YLSLQHVDLSH 77
PS S + + + L IP++ I + L N IK++ + I Y L+ +D+S
Sbjct: 281 PSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISK 340
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I F+ + L L L NK P+ + ++S + + + N+I+ + F
Sbjct: 341 NQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLL-LLNANKINCLRVNTF 399
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ L L +L L DN+L+++ F L + L + N F
Sbjct: 400 QDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPF 439
Score = 103 (41.3 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ L L L +NQ++ +P +F + + L++ N + + DGAF
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L ++ I +F + +R+L L N L
Sbjct: 178 RALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 95 (38.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 40/170 (23%), Positives = 75/170 (44%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIG 86
P+CN AN PS + S + + + + +P + + L + IP G
Sbjct: 271 PACN---ANSLSCPSACSCSNNIVDCRGKGLTEIPANLPE--GIVEIRLEQNSIKSIPAG 325
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F +KL + ++ N+ + S + ++G N+I+ I + F+GL +L++L
Sbjct: 326 AFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYG-NKITEIPKGLFDGLVSLQLL 384
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
L+ N++ + +F L L L + N T++ G F L + L L
Sbjct: 385 LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHL 434
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 278 (102.9 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 102/421 (24%), Positives = 179/421 (42%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L ++ I AF+ L L L L N+LQ +P
Sbjct: 71 NNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
+L L++ +N + F+G++ +K L++ ++++ + GAF
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDN-NHISCIEDGAFR-ALRDLEILTL 188
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-----PELRTID---IAENPI 344
I + +P + L L N + + LAW + RTI + P+
Sbjct: 189 NNNNISRILVTSFNHMPKIRTLRLHSNHL--YCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 345 EC-GCNILWLRE---MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
G ++ +++ + ++ A CN+ + L S S S + C G GLT I N
Sbjct: 247 HLRGFSVADVQKKEYVCPGPHSEAPACNANS-LSCPSACSCSNNIVDCRGKGLTEIPANL 305
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
G+ +R L N ++SIP + +L+ ++I +N S + F+GL L L +
Sbjct: 306 PEGIVEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVL 362
Query: 461 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE 520
G + +T + KG F D + + L NL L+L +N + S+
Sbjct: 363 YG-NKITEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK 420
Query: 521 SMLA-WPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSLISLSA 577
+ A ++T+ +A+NP C C++ WL + L TS C+SP L K + + +
Sbjct: 421 GLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKS 480
Query: 578 E 578
+
Sbjct: 481 K 481
Score = 204 (76.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 75/291 (25%), Positives = 125/291 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL +T I+ F GL LR L L DN++ I L +LE L + +N +L
Sbjct: 66 LDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L RL+++ + + + + AF IE+GA L +L
Sbjct: 126 ELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGVTGVKNLQLDNNHISC-IEDGAFRALRDL 183
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N + S P++RT+ + N + C C++ WL + L +R T F C
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCM 243
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
+P L+ S+ + ++ C G + NA LS S N + K L+++
Sbjct: 244 APVHLRGFSVADVQKKEYVCPGPHSEAPACNA-NSLS-CPSACSCSNNIVDCRGKGLTEI 301
Query: 429 TR-----LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ E+ + QN + AG F LKR++I+ + ++ + AF
Sbjct: 302 PANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDIS-KNQISDIAPDAF 351
Score = 188 (71.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 83/371 (22%), Positives = 144/371 (38%)
Query: 216 LVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L DN + + T KL L ++ + N + G F G + ++ L +TG N
Sbjct: 537 LRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTG--NQLE 594
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPE 333
G + GL ++ L+L +N T+ S +
Sbjct: 595 TMHGRMFRGLSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVS 654
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAG- 390
L TI++ NP C C++ WL L +R + C P LK + ++ +D C G
Sbjct: 655 LSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 714
Query: 391 -AGLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
+S + + ++V NR L ++P K + K + EL + N + +
Sbjct: 715 EENSCQLSPRCPEQCTCVETVVRCSNRGLHTLP-KGMPK--DVTELYLEGNHLTAVP--- 768
Query: 449 FKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
K LS ++L + SN ++ + F++ I A GL +L
Sbjct: 769 -KELSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR-CIPVHAFNGLRSLR 826
Query: 507 HLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNS 563
L L N +S E S L + + NP+ C C++ WL E + + C+S
Sbjct: 827 VLTLHGNDISSVPEGSFNDLTSLSHLALGINPLHCDCSLRWLSEWIKAGYKEPGIARCSS 886
Query: 564 PAPLKYKSLIS 574
P + + L++
Sbjct: 887 PESMADRLLLT 897
Score = 176 (67.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 47/153 (30%), Positives = 74/153 (48%)
Query: 116 PRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
PR E +N I+RI + F GL LR+L+L+DNQ+ + +F L L LR+ N
Sbjct: 60 PRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKN 119
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L + F +L+ LDL + I AFRG++G+++L L +N + I
Sbjct: 120 KLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRA 179
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L LE L + N S + F + ++ L +
Sbjct: 180 LRDLEILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 163 (62.4 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 88/399 (22%), Positives = 149/399 (37%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
+ +I AF L+ + ++ N++ I L L L + N + + G F GL
Sbjct: 319 IKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGL 378
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
L+ L + A+ + +R F D I +G L ++ L+L +
Sbjct: 379 VSLQLL-LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGLFAPLQSIQTLHLAQ 436
Query: 319 NAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNT---SAVF-CNSPAPL 373
N F + L W L + +NPIE G R + +R + S F C+
Sbjct: 437 NPFVC--DCHLKW--LADY-LQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDY 491
Query: 374 K--YKS---LISLSAEDLGCAGAGLTNISDNAFRGLSGL----RSLVLTDNRLQSIP-TK 423
+ + S + + E C G + + R S L L L DN + + T
Sbjct: 492 RNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATG 551
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
KL L ++ + N + G F G + ++ L +TG N G
Sbjct: 552 IFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTG--NQLETMHGRMFRGLSGLKT 609
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGC 542
+ D GL ++ L+L +N T+ S + L TI++ NP C C
Sbjct: 610 LMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSNPFNCNC 669
Query: 543 NILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
++ WL L +R + C P LK + ++ +D
Sbjct: 670 HMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Score = 158 (60.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I +AE L +T I+ F GL LR L L DN++ I L +LE L + +
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N +L F+ L RL+++ + + + + AF IE+ A
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGVTGVKNLQLDNNHIS-CIEDGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L +L L L N + S P++RT+ + N + C C++ WL + L +R T
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTI 236
Query: 558 AVF--CNSPAPLKYKSLISLSAED 579
F C +P L+ S+ + ++
Sbjct: 237 GQFTLCMAPVHLRGFSVADVQKKE 260
Score = 146 (56.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
EG+ +R L+ N ++S+P +FI L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T I F GL L+ L+L N++ + L L L + N + G F
Sbjct: 364 GNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 424 APLQSIQTLHL 434
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 43/174 (24%), Positives = 75/174 (43%)
Query: 100 NHNKHFPQQIVCSIISPRRVEIFG------QNRISRIDQACFEGLTALRILYLDDNQLRS 153
++ F + ++ P + G ++SRI E T LR L+DN +
Sbjct: 490 DYRNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLSRIPSHLPEYTTDLR---LNDNDIAV 546
Query: 154 VP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
+ T F L L ++ + N + +GAF+G + L L G L + FRGLSG
Sbjct: 547 LEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSG 606
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L++L+L N + + + L+ + L + N + + G F L L + +
Sbjct: 607 LKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINL 660
Score = 127 (49.8 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 40/130 (30%), Positives = 58/130 (44%)
Query: 119 VEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
VEI QN I I F L+ + + NQ+ + +F L L L + N T
Sbjct: 310 VEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ G F+GL L L L + + N F+ L L L L DN+LQ+I + L +
Sbjct: 370 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSI 429
Query: 238 EELEIGQNGF 247
+ L + QN F
Sbjct: 430 QTLHLAQNPF 439
Score = 119 (46.9 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
RV N++S I++ F+ L L L L+ N+L+ +P F L L + N
Sbjct: 88 RVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQG 147
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ AF G+ + L L ++ I D AFR L L L L +N + I + + ++
Sbjct: 148 IPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKI 207
Query: 238 EELEIGQN 245
L + N
Sbjct: 208 RTLRLHSN 215
Score = 114 (45.2 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 43/179 (24%), Positives = 81/179 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSH 77
P++ + S + L +P + +RL L N I + L +L+ + L
Sbjct: 35 PTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFTGLKNLRVLHLED 94
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
+I G F+ ++L L+LN NK P+ + S R+++ +N+I I + F
Sbjct: 95 NQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDL-SENQIQGIPRKAF 153
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
G+T ++ L LD+N + + +F L L L + N + + +FN + ++ L L
Sbjct: 154 RGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 106 (42.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 40/160 (25%), Positives = 72/160 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI-YLSLQHVDLSH 77
PS S + + + L IP++ I + L N IK++ + I Y L+ +D+S
Sbjct: 281 PSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISK 340
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I F+ + L L L NK P+ + ++S + + + N+I+ + F
Sbjct: 341 NQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLL-LLNANKINCLRVNTF 399
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ L L +L L DN+L+++ F L + L + N F
Sbjct: 400 QDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPF 439
Score = 103 (41.3 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ L L L +NQ++ +P +F + + L++ N + + DGAF
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L ++ I +F + +R+L L N L
Sbjct: 178 RALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 95 (38.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 40/170 (23%), Positives = 75/170 (44%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIG 86
P+CN AN PS + S + + + + +P + + L + IP G
Sbjct: 271 PACN---ANSLSCPSACSCSNNIVDCRGKGLTEIPANLPE--GIVEIRLEQNSIKSIPAG 325
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F +KL + ++ N+ + S + ++G N+I+ I + F+GL +L++L
Sbjct: 326 AFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYG-NKITEIPKGLFDGLVSLQLL 384
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
L+ N++ + +F L L L + N T++ G F L + L L
Sbjct: 385 LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHL 434
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 77/307 (25%), Positives = 126/307 (41%)
Query: 87 GFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQN-RISRIDQACFEGLTALRILY 145
GF +L++L+ NH P+ + R V + Q+ I+ ++ GL +L LY
Sbjct: 415 GFPNDTQLLDLRRNHFPLVPRAAFQGL--GRLVSLHLQHCGITELEAGALAGLGSLIYLY 472
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L DN L + + L L + N F + A L L +L L+ + ++
Sbjct: 473 LSDNGLSGLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPG 532
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
G LR L L+ NRL + L LE+L + +N + +GL L L+
Sbjct: 533 DLAGGRALRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQ 592
Query: 266 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL-PNLYHLNLKENAFTSF 324
++G + L +++GAF I GA GL P L L L++N +
Sbjct: 593 LSG-NPLRALQEGAFRPVGRSLQHLFLNSSGLEQISPGAFSGLGPQLQSLYLQKNQLQAL 651
Query: 325 SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA-VFCNSPAPLKYKSLISLSA 383
+ +L ID++ NP C C +L L L N C +P + + + + +A
Sbjct: 652 PP-LPGLRQLELIDLSGNPFHCDCQLLPLHRWLTGLNLRVGATCATPPSARGQRVKAAAA 710
Query: 384 EDLGCAG 390
C G
Sbjct: 711 VFDACPG 717
Score = 193 (73.0 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 71/210 (33%), Positives = 95/210 (45%)
Query: 60 VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
V +AIP L+ Q +DL +IP F+ L L L H + + +
Sbjct: 53 VPNAIP-ELT-QRLDLRGNVLRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLL 110
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
+ NR+S + Q +GL +LR L L+ N L + +F LG LA L + N L
Sbjct: 111 LLNLASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYL 170
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
AF GL R L L L+ ++ A GL LR L L N LQS+P LS+ L
Sbjct: 171 PPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLA 230
Query: 239 ELEIGQNGFSML--EAG-CFKGLSYLKRLE 265
LE+G N F+ E G GL L RLE
Sbjct: 231 RLELGHNPFTYAGEEDGLALPGLREL-RLE 259
Score = 189 (71.6 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 74/270 (27%), Positives = 109/270 (40%)
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 185
++ + + F GL L +L L N+L ++P + LG L L + N+ L G F
Sbjct: 94 QVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGA 153
Query: 186 LGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
LG L+ L+L L + AF+GL R L L+ N L + + L+ L L L + N
Sbjct: 154 LGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHN 213
Query: 246 GFSMLEAGCFKGLSYLKRLEITGASNLTRV-RKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
L L RLE+ G + T + A ++ A
Sbjct: 214 ELQSLPGLALSQARGLARLEL-GHNPFTYAGEEDGLA--LPGLRELRLEHGALQALDPRA 270
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAENPIECGCNILWLREMLVR-RNT 362
P L+ L+L+ N + P +LR + + NP+ CGC L E L R R
Sbjct: 271 FAHCPRLHTLDLRGNQLDALLPPQ--GPGQLRRLQLQGNPLWCGCRARPLLEWLARARVR 328
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAG 392
S C P P + +L L C GAG
Sbjct: 329 SDGACWGPRPCAARPWRALRPW-LRCLGAG 357
Score = 170 (64.9 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 64/230 (27%), Positives = 93/230 (40%)
Query: 117 RRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 176
+R+++ G N + I A F+ L L L L Q+ V +F LG L L + N +
Sbjct: 62 QRLDLRG-NVLRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLS 120
Query: 177 TLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 236
L A +GLG L L+L G L + F L L +L L N L +P L R
Sbjct: 121 ALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVR 180
Query: 237 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX 296
L++ N S+L GL L+RL + + L + A +
Sbjct: 181 ARWLQLSHNALSVLAPEALAGLPALRRLSLHH-NELQSLPGLALSQARGLARLELGHNPF 239
Query: 297 XXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIE 345
EE L LP L L L+ A + A P L T+D+ N ++
Sbjct: 240 TYAGEEDGLA-LPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLD 288
Score = 167 (63.8 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 58/212 (27%), Positives = 88/212 (41%)
Query: 71 QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF-GQNRISR 129
Q +DL + ++P F+ +LV L L H + + ++ N +S
Sbjct: 421 QLLDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSG 480
Query: 130 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 189
+ EG L LYL+ N+ VP + L L L + N LA G G L
Sbjct: 481 LSATALEGAPRLGYLYLERNRFLQVPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRAL 540
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 249
L L G LT +S A L L L N+L +PT+ L L L EL++ N
Sbjct: 541 RWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNPLRA 600
Query: 250 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L+ G F+ + + +S L ++ GAF+
Sbjct: 601 LQEGAFRPVGRSLQHLFLNSSGLEQISPGAFS 632
Score = 133 (51.9 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 59/240 (24%), Positives = 102/240 (42%)
Query: 8 ELRSKCMNPYEPSRFSTRD--PSCNLQEANLDVIPSHSNPSIQRLVL---STNRIKTV-D 61
+LR + P+ F +L+ ++++ + + RL+L ++NR+ +
Sbjct: 65 DLRGNVLRVIPPAAFQDLPYLTHLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQ 124
Query: 62 SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRV 119
A+ SL+ ++L + G F L L L HN + P ++ R +
Sbjct: 125 EALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWL 184
Query: 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
++ N +S + GL ALR L L N+L+S+P + LA L +G N FT
Sbjct: 185 QL-SHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAG 243
Query: 180 DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI-PTKQLSKLTRLE 238
+ L L L L L + AF L +L L N+L ++ P + +L RL+
Sbjct: 244 EEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRGNQLDALLPPQGPGQLRRLQ 303
Score = 132 (51.5 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 49/190 (25%), Positives = 76/190 (40%)
Query: 377 SLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
SL SL +D + ++ G LR L L+ NRL + L LE+L +
Sbjct: 515 SLFSLHLQD-----NAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQELEKLHL 569
Query: 437 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEE 496
+N + +GL L L+++G + L +++GAF I
Sbjct: 570 DRNQLPEVPTEALEGLPALLELQLSG-NPLRALQEGAFRPVGRSLQHLFLNSSGLEQISP 628
Query: 497 DALVGL-PNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRN 555
A GL P L L L++N + + +L ID++ NP C C +L L L N
Sbjct: 629 GAFSGLGPQLQSLYLQKNQLQALPP-LPGLRQLELIDLSGNPFHCDCQLLPLHRWLTGLN 687
Query: 556 TSA-VFCNSP 564
C +P
Sbjct: 688 LRVGATCATP 697
Score = 125 (49.1 bits), Expect = 0.00028, P = 0.00028
Identities = 54/186 (29%), Positives = 76/186 (40%)
Query: 372 PLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 431
P ++ L L+ DL L +++ AFRGL L L L NRL ++P + L L L
Sbjct: 76 PAAFQDLPYLTHLDLRHCQVEL--VAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSL 133
Query: 432 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN-LTRVRKGAFADXXXXXXXXXXXXXX 490
LE+ N L G F L L L + A N L + AF
Sbjct: 134 RRLELEGNLLEELRPGTFGALGALATLNL--AHNALVYLPPMAF-QGLVRARWLQLSHNA 190
Query: 491 XXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPI-----ECGCNI 544
++ +AL GLP L L+L N S L+ L +++ NP E G +
Sbjct: 191 LSVLAPEALAGLPALRRLSLHHNELQSLPGLALSQARGLARLELGHNPFTYAGEEDGLAL 250
Query: 545 LWLREM 550
LRE+
Sbjct: 251 PGLREL 256
Score = 116 (45.9 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 48/180 (26%), Positives = 79/180 (43%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENP-IEC-GCNILWLREM 356
+E GAL GL +L +L L +N + S + L P L + + N ++ G + L +
Sbjct: 457 LEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFLQVPGAALGALPSL 516
Query: 357 L-VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
+ +AV +P L + L +G LT +S A L L L N
Sbjct: 517 FSLHLQDNAVDRLAPGDLAGGRALRW----LYLSGNRLTQVSPGALGPAQELEKLHLDRN 572
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
+L +PT+ L L L EL++ N L+ G F+ + + +S L ++ GAF+
Sbjct: 573 QLPEVPTEALEGLPALLELQLSGNPLRALQEGAFRPVGRSLQHLFLNSSGLEQISPGAFS 632
Score = 77 (32.2 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 34/148 (22%), Positives = 54/148 (36%)
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
G+T + A GL L L L+DN L + L RL L + +N F +
Sbjct: 453 GITELEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFLQVPGAALGA 512
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLK 511
L L L + + + R+ G A + AL L L+L
Sbjct: 513 LPSLFSLHLQDNA-VDRLAPGDLAGGRALRWLYLSGNRLTQV-SPGALGPAQELEKLHLD 570
Query: 512 ENAFTSF-SESMLAWPELRTIDIAENPI 538
N +E++ P L + ++ NP+
Sbjct: 571 RNQLPEVPTEALEGLPALLELQLSGNPL 598
Score = 76 (31.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 36/139 (25%), Positives = 54/139 (38%)
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLV-LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 445
GC GL + RG L+ L N +P L RL L + G + LE
Sbjct: 403 GCEARGLRAVP----RGFPNDTQLLDLRRNHFPLVPRAAFQGLGRLVSLHLQHCGITELE 458
Query: 446 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNL 505
AG GL L L ++ + L+ + A + + AL LP+L
Sbjct: 459 AGALAGLGSLIYLYLSD-NGLSGLSATAL-EGAPRLGYLYLERNRFLQVPGAALGALPSL 516
Query: 506 YHLNLKENAFTSFSESMLA 524
+ L+L++NA + LA
Sbjct: 517 FSLHLQDNAVDRLAPGDLA 535
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 225 (84.3 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 95/414 (22%), Positives = 158/414 (38%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L ++ I AF+ L L L L N LQ P
Sbjct: 65 NNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFL 124
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
+L L++ +N + F+G +K L++ + ++ + GAF
Sbjct: 125 GTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLD-YNQISCIEDGAFR-ALRDLEVLTL 182
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW--------PELRTIDIAENPI 344
+ + +P L L N + + LAW P + P
Sbjct: 183 NNNNITRLSVASFNHMPKLRTFRLHSNNL--YCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 345 EC-GCNILWLREM-LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
G N+ +++ V + S + L + + S + C G GLT I N
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE 300
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
++ +R L N ++ IP S +L +++ N S L F+GL L L + G
Sbjct: 301 TITEIR---LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 357
Query: 463 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESM 522
+ +T + K F + + DA L NL L+L +N + ++
Sbjct: 358 -NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 415
Query: 523 LAWP--ELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSL 572
+ P ++T+ +A+NP C C++ WL + L TS C SP L K +
Sbjct: 416 FS-PLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRI 468
Score = 219 (82.2 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 88/367 (23%), Positives = 154/367 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D RG GLT I N ++ +R L N ++ IP S +L +++ N S L
Sbjct: 284 VDCRGKGLTEIPTNLPETITEIR---LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELA 340
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+GL L L + G + +T + K F + + A L NL
Sbjct: 341 PDAFQGLRSLNSLVLYG-NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNL 398
Query: 312 YHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFC 367
L+L +N + ++ + P ++T+ +A+NP C C++ WL + L TS C
Sbjct: 399 NLLSLYDNKLQTIAKGTFS-PLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARC 457
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA-FRG-LSG--LRSLVLTDN-RLQSIPT 422
SP L K + + ++ C+ I +R LSG L + R +
Sbjct: 458 TSPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTV 517
Query: 423 ----KQLSKLTR-----LEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKG 472
++L+K+ EL + N F++LEA G FK L L+++ + + +T + +G
Sbjct: 518 DCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSN-NKITDIEEG 576
Query: 473 AFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAWPELRTI 531
AF + ++ GL +L L L+ N T ++S + +R +
Sbjct: 577 AF-EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 635
Query: 532 DIAENPI 538
+ +N I
Sbjct: 636 SLYDNQI 642
Score = 209 (78.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 73/291 (25%), Positives = 125/291 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL G +T I+ F GL LR L L +N++ +I L LE L + +N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F G + L RL+++ + + + + AF IE+GA L +L
Sbjct: 120 ELLFLGTAKLYRLDLS-ENQIQAIPRKAFRGAVDIKNLQLDYNQISC-IEDGAFRALRDL 177
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T S S P+LRT + N + C C++ WL + L +R ++ C
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 369 SPAPLKYKSLISLSAEDLGCAG-AGLTNISDNAFRGLSGLR-SLVLTDNR---LQSIPTK 423
P+ L+ ++ + + C+G S + + S + D R L IPT
Sbjct: 238 GPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTN 297
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+T E+ + QN ++ G F L+R++++ + ++ + AF
Sbjct: 298 LPETIT---EIRLEQNTIKVIPPGAFSPYKKLRRIDLSN-NQISELAPDAF 344
Score = 170 (64.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 56/209 (26%), Positives = 88/209 (42%)
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
S V C+ A I + E L G +T I+ F GL LR L L +N++ +I
Sbjct: 37 STVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIER 96
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
L LE L + +N + F G + L RL+++ + + + + AF
Sbjct: 97 GAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDLS-ENQIQAIPRKAFRGAVDIKN 155
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECG 541
IE+ A L +L L L N T S S P+LRT + N + C
Sbjct: 156 LQLDYNQIS-CIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 214
Query: 542 CNILWLREMLVRRNTSAVF--CNSPAPLK 568
C++ WL + L +R ++ C P+ L+
Sbjct: 215 CHLAWLSDWLRQRPRVGLYTQCMGPSHLR 243
Score = 167 (63.8 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 82/374 (21%), Positives = 149/374 (39%)
Query: 216 LVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L +N + T KL +L ++ N + +E G F+G S + + +T ++ L
Sbjct: 538 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT-SNRLEN 596
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPE 333
V+ F + + +GL ++ L+L +N T+ +
Sbjct: 597 VQHKMFKGLESLKTLMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHS 655
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
L T+++ NP C C + WL E L ++ T C P LK + ++ +D C
Sbjct: 656 LSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDG 715
Query: 392 GLTNISDNAFR---GLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
N R + L ++V N+ L+ +P K + + + EL + N F+++
Sbjct: 716 NDDNSCSPLSRCPTECTCLDTVVRCSNKGLKVLP-KGIPR--DVTELYLDGNQFTLVP-- 770
Query: 448 CFKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNL 505
K LS K L + SN ++ + +F++ I GL +L
Sbjct: 771 --KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CIPPRTFDGLKSL 827
Query: 506 YHLNLKENAFTSFSESMLAWPELRTID---IAENPIECGCNILWLREMLVR--RNTSAVF 560
L+L N + E A+ +L + I NP+ C CN+ WL + + +
Sbjct: 828 RLLSLHGNDISVVPEG--AFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIAR 885
Query: 561 CNSPAPLKYKSLIS 574
C P + K L++
Sbjct: 886 CAGPGEMADKLLLT 899
Score = 156 (60.0 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 40/116 (34%), Positives = 62/116 (53%)
Query: 166 AELRVGLNVFTTL-ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
AELR+ N FT L A G F L +L ++ +T+I + AF G SG+ ++LT NRL+
Sbjct: 536 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE 595
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
++ K L L+ L + N + + F GLS ++ L + + +T V GAF
Sbjct: 596 NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYD-NQITTVAPGAF 650
Score = 148 (57.2 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 45/155 (29%), Positives = 73/155 (47%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+++ G N I+RI + F GL LR+L L +N++ ++ +F L L LR+ N
Sbjct: 59 RLDLNGNN-ITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQL 117
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ F G +L LDL + I AFRG +++L L N++ I L L
Sbjct: 118 FPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDL 177
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
E L + N + L F + L+ + ++NL
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLH-SNNL 211
Score = 127 (49.8 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 44/196 (22%), Positives = 82/196 (41%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEA 446
C+ L I ++ + + LR L +N + T KL +L ++ N + +E
Sbjct: 519 CSNQKLNKIPEHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEE 575
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
G F+G S + + +T ++ L V+ F + D+ +GL ++
Sbjct: 576 GAFEGASGVNEILLT-SNRLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVR 633
Query: 507 HLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNS 563
L+L +N T+ + L T+++ NP C C + WL E L ++ T C
Sbjct: 634 LLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQK 693
Query: 564 PAPLKYKSLISLSAED 579
P LK + ++ +D
Sbjct: 694 PYFLKEIPIQDVAIQD 709
Score = 125 (49.1 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 41/163 (25%), Positives = 71/163 (43%)
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
H P CS V+ G+ ++ I E +T +R L+ N ++ +P +F
Sbjct: 272 HCPAACTCS---NNIVDCRGKG-LTEIPTNLPETITEIR---LEQNTIKVIPPGAFSPYK 324
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L + + N + LA AF GL L++L L G +T + + F GL L+ L+L N++
Sbjct: 325 KLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI 384
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ L L L + N + G F L ++ + +
Sbjct: 385 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHL 427
Score = 124 (48.7 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I I F LR + L +NQ+ + +F L L L + N T L F
Sbjct: 309 QNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLF 368
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L L + + +AF+ L L L L DN+LQ+I S L ++ + +
Sbjct: 369 EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLA 428
Query: 244 QNGF 247
QN F
Sbjct: 429 QNPF 432
Score = 124 (48.7 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 37/135 (27%), Positives = 68/135 (50%)
Query: 64 IPIYL--SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRV 119
IP L ++ + L T +IP G F P +KL + L++N+ + S +
Sbjct: 294 IPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Query: 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
++G N+I+ + ++ FEGL +L++L L+ N++ + +F L L L + N T+A
Sbjct: 354 VLYG-NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 412
Query: 180 DGAFNGLGRLSALDL 194
G F+ L + + L
Sbjct: 413 KGTFSPLRAIQTMHL 427
Score = 119 (46.9 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 45/186 (24%), Positives = 81/186 (43%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHV---DL 75
P++ S + + L +P + + +RL L+ N I + + L+H+ L
Sbjct: 29 PAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRVLQL 86
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
I G F+ ++L L+LN N + FP+ + R+++ +N+I I +
Sbjct: 87 MENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKLYRLDL-SENQIQAIPRK 145
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F G ++ L LD NQ+ + +F L L L + N T L+ +FN + +L
Sbjct: 146 AFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFR 205
Query: 194 LRGAGL 199
L L
Sbjct: 206 LHSNNL 211
Score = 118 (46.6 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L + L+ +DL ++ +S+ +F ++ L +L+L+ NRL+
Sbjct: 756 VTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 814
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP + L L L + N S++ G F LS L L I GA+ L
Sbjct: 815 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI-GANPL 861
Score = 118 (46.6 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 96 ELQLNHNKHFPQQIVCSIIS--PRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLR 152
EL+LN+N+ F I P+ +I F N+I+ I++ FEG + + + L N+L
Sbjct: 537 ELRLNNNE-FTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE 595
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
+V F L L L + N T + + +F GL + L L +T ++ AF L
Sbjct: 596 NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHS 655
Query: 213 LRSLVLTDN 221
L +L L N
Sbjct: 656 LSTLNLLAN 664
Score = 103 (41.3 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F+ L LR + +N++ + +F + E+ + N + F GL L L L
Sbjct: 554 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 613
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248
R +T + +++F GLS +R L L DN++ ++ L L L + N F+
Sbjct: 614 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 667
Score = 101 (40.6 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 42/151 (27%), Positives = 68/151 (45%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSL---QHVDLSHTTWLIIPI 85
C+ Q+ N IP H L L+ N TV A I+ L + ++ S+ I
Sbjct: 519 CSNQKLNK--IPEHIPQYTAELRLNNNEF-TVLEATGIFKKLPQLRKINFSNNKITDIEE 575
Query: 86 GGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
G FE + E+ L N+ Q + + + + NRI+ + F GL+++R+L
Sbjct: 576 GAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 635
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
L DNQ+ +V +F L L+ L + N F
Sbjct: 636 SLYDNQITTVAPGAFDTLHSLSTLNLLANPF 666
Score = 79 (32.9 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 38/165 (23%), Positives = 65/165 (39%)
Query: 239 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXX 296
EL + N F+++ K LS K L + SN ++ + +F++
Sbjct: 758 ELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 813
Query: 297 XXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTID---IAENPIECGCNILWL 353
I GL +L L+L N + E A+ +L + I NP+ C CN+ WL
Sbjct: 814 RC-IPPRTFDGLKSLRLLSLHGNDISVVPEG--AFNDLSALSHLAIGANPLYCDCNMQWL 870
Query: 354 REMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
+ + + C P + K L++ ++ C G NI
Sbjct: 871 SDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDVNI 915
Score = 37 (18.1 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 531 IDIAENPIECGC 542
+D E ++CGC
Sbjct: 1513 VDEVEKVVKCGC 1524
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 337 IDIAENPIECGC 348
+D E ++CGC
Sbjct: 1513 VDEVEKVVKCGC 1524
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 266 (98.7 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 95/361 (26%), Positives = 158/361 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D RG GLT I N G+ +R L N ++SIP ++ +L+ ++I +N S +
Sbjct: 88 VDCRGKGLTEIPANLPEGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 144
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+GL L L + G + +T + KG F D + L NL
Sbjct: 145 PDAFQGLKSLTSLVLYG-NKITELAKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNL 202
Query: 312 YHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCN 368
L+L +N + S+ + A ++T+ +A+NP C C++ WL + L TS C+
Sbjct: 203 NLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCS 262
Query: 369 SPAPLKYKSLISLSAEDLGCAGAG--LTNISDNAFRGL---SGLR---SLVLTDN-RLQS 419
SP L K + + ++ C+G+ + S F L R ++V N +L
Sbjct: 263 SPRRLANKRIGQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLAR 322
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
IP+ +T +L + N S+LEA G FK L L+++ ++ + + VR+GAF D
Sbjct: 323 IPSHLPEYVT---DLRLNDNEISVLEATGIFKKLPNLRKINLSN-NKIKEVREGAF-DGA 377
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENP 537
+ GL +L L L+ N T S A +R + + +N
Sbjct: 378 ASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNR 437
Query: 538 I 538
I
Sbjct: 438 I 438
Score = 198 (74.8 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 57/209 (27%), Positives = 96/209 (45%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 426
CN+ + + S + S + C G GLT I N G+ +R L N ++SIP +
Sbjct: 70 CNANS-ISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEIR---LEQNSIKSIPAGAFT 125
Query: 427 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 486
+ +L+ ++I +N S + F+GL L L + G + +T + KG F D
Sbjct: 126 QYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYG-NKITELAKGLF-DGLVSLQLLLL 183
Query: 487 XXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNIL 545
+ + L NL L+L +N + S+ + A ++T+ +A+NP C C++
Sbjct: 184 NANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLK 243
Query: 546 WLREMLVRR--NTSAVFCNSPAPLKYKSL 572
WL + L TS C+SP L K +
Sbjct: 244 WLADYLQDNPIETSGARCSSPRRLANKRI 272
Score = 193 (73.0 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 83/371 (22%), Positives = 148/371 (39%)
Query: 216 LVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L DN + + T KL L ++ + N + G F G + ++ L +TG + L
Sbjct: 334 LRLNDNEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTG-NQLET 392
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPE 333
V G + GL ++ L+L +N T+ + +
Sbjct: 393 VH-GRMFRGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 451
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
L TI++ NP C C++ WL + L +R + C P LK + ++ +D C G
Sbjct: 452 LSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGN 511
Query: 392 GLTN--ISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
++ + + L ++V NR L ++P K + K + EL + N + +
Sbjct: 512 DESSCQLGPRCPEQCTCLETVVRCSNRGLHTLP-KGIPK--DVTELYLEGNHLTAVP--- 565
Query: 449 FKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
+ LS L+ L + SN + + F++ I A GL +L
Sbjct: 566 -RELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLR-CIPIHAFDGLRSLR 623
Query: 507 HLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNS 563
L L N +S E + L + + NP+ C C++ WL E + + C+S
Sbjct: 624 VLTLHGNDISSVPEGSFSDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSS 683
Query: 564 PAPLKYKSLIS 574
P P+ + L++
Sbjct: 684 PEPMADRLLLT 694
Score = 168 (64.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 91/401 (22%), Positives = 150/401 (37%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
+ +I AF L+ + ++ N++ I L L L + N + L G F GL
Sbjct: 116 IKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELAKGLFDGL 175
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
L+ L + A+ + +R F D I +G L + L+L +
Sbjct: 176 VSLQLL-LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGLFAPLQAIQTLHLAQ 233
Query: 319 NAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRN---TSAVF-CNSPAPL 373
N F + L W L + +NPIE G R + +R S F C+
Sbjct: 234 NPFVC--DCHLKW--LADY-LQDNPIETSGARCSSPRRLANKRIGQIKSKKFRCSGSED- 287
Query: 374 KYKSLIS-------LSAEDLGCAGAGLTNISDNAFRGLSGLRSLV----LTDNRLQSIP- 421
Y+S S + E C G + + R S L V L DN + +
Sbjct: 288 -YRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLEA 346
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 481
T KL L ++ + N + G F G + ++ L +TG + L V G
Sbjct: 347 TGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTG-NQLETVH-GRMFRGLSSL 404
Query: 482 XXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIEC 540
+ D GL ++ L+L +N T+ + + L TI++ NP C
Sbjct: 405 KTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNC 464
Query: 541 GCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
C++ WL + L +R + C P LK + ++ +D
Sbjct: 465 NCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 505
Score = 141 (54.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 35/131 (26%), Positives = 61/131 (46%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
EG+ +R L+ N ++S+P +F L + + N + +A AF GL L++L L
Sbjct: 104 EGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 160
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T ++ F GL L+ L+L N++ + L L L + N + G F
Sbjct: 161 GNKITELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 220
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 221 APLQAIQTLHL 231
Score = 136 (52.9 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 42/130 (32%), Positives = 59/130 (45%)
Query: 119 VEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
VEI QN I I F L+ + + NQ+ + +F L L L + N T
Sbjct: 107 VEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 166
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
LA G F+GL L L L + + N F+ L L L L DN+LQ+I + L +
Sbjct: 167 LAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAI 226
Query: 238 EELEIGQNGF 247
+ L + QN F
Sbjct: 227 QTLHLAQNPF 236
Score = 134 (52.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 39/125 (31%), Positives = 62/125 (49%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ L LR + L +N+++ V +F + EL + N T+ F
Sbjct: 339 NEISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMF 398
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR +T +S++ F GLS +R L L DNR+ +I + L L + +
Sbjct: 399 RGLSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLL 458
Query: 244 QNGFS 248
N F+
Sbjct: 459 SNPFN 463
Score = 127 (49.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 41/174 (23%), Positives = 76/174 (43%)
Query: 100 NHNKHFPQQIVCSIISPRRVEIFG------QNRISRIDQACFEGLTALRILYLDDNQLRS 153
++ F + ++ P + G +++RI E +T LR L+DN++
Sbjct: 287 DYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLR---LNDNEISV 343
Query: 154 VP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
+ T F L L ++ + N + +GAF+G + L L G L + FRGLS
Sbjct: 344 LEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSS 403
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L++L+L N + + + L+ + L + N + + G F L L + +
Sbjct: 404 LKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINL 457
Score = 99 (39.9 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 52/220 (23%), Positives = 93/220 (42%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIG 86
PSCN AN PS S + + + + +P + + L + IP G
Sbjct: 68 PSCN---ANSISCPSACTCSNNIVDCRGKGLTEIPANLPE--GIVEIRLEQNSIKSIPAG 122
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F +KL + ++ N+ + S + ++G N+I+ + + F+GL +L++L
Sbjct: 123 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYG-NKITELAKGLFDGLVSLQLL 181
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L+ N++ + +F L L L + N T++ G F L + L L A + D
Sbjct: 182 LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHL--AQNPFVCD 239
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
+ L+ L DN +++ + S RL IGQ
Sbjct: 240 CHLKWLADY----LQDNPIETSGAR-CSSPRRLANKRIGQ 274
Score = 94 (38.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 41/177 (23%), Positives = 77/177 (43%)
Query: 4 DAGQELRSKC-MNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS 62
D S+C M+ P + + L IPSH + L L+ N I ++
Sbjct: 287 DYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLE- 345
Query: 63 AIPIYL---SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
A I+ +L+ ++LS+ + G F+ + EL L N+ + +S +
Sbjct: 346 ATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLK 405
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ N I+ + F GL+++R+L L DN++ ++ +F L L+ + + N F
Sbjct: 406 TLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPF 462
Score = 92 (37.4 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 26/96 (27%), Positives = 41/96 (42%)
Query: 304 ALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVR--R 360
A GL +L L L N +S E + L + + NP+ C C++ WL E + +
Sbjct: 615 AFDGLRSLRVLTLHGNDISSVPEGSFSDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYK 674
Query: 361 NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
C+SP P+ + L++ C G NI
Sbjct: 675 EPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDINI 710
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 268 (99.4 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 107/428 (25%), Positives = 172/428 (40%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N T + F GL L L L + +I AF L L L L NRLQ +P
Sbjct: 63 LDLNANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLP 122
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 287
K L L++ +N M+ F+G + +K L++ ++++ + GAF
Sbjct: 123 ELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLD-KNHISCIEDGAFR-AMRVL 180
Query: 288 XXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLA-W----PELRTIDIAE 341
I + +P L L N+ + S L+ W P L
Sbjct: 181 EVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCQLSWLSQWLRQRPALGLYTQCS 240
Query: 342 NPIEC-GCNILWLREMLVRRNTSA-VFCNSPAPLKYKS-----LISLSAEDLGCAGAGLT 394
+P G N L E+ + T A +SP P S + S + + C G GLT
Sbjct: 241 SPAHLHGLN---LAELQKKDFTCAGALDSSPQPCGLASGSCPPMCSCTNNIVDCRGKGLT 297
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I N ++ +R L N ++S+P S RL +++ N S + F GL
Sbjct: 298 AIPANMPESMTEIR---LEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRS 354
Query: 455 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENA 514
L L + G + +T + +G F D + + L NL L+L +N
Sbjct: 355 LNSLVLYG-NKITDLPRGVF-DGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNK 412
Query: 515 FTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPLKYK 570
+ ++ A ++T+ +A+NP C C + WL + L R N TS C+SP L K
Sbjct: 413 IQTLAKGTFAPLKSIQTLHLAQNPFVCDCGLKWLADFL-RSNPIETSGARCSSPRRLANK 471
Query: 571 SLISLSAE 578
+ + ++
Sbjct: 472 RISQIKSK 479
Score = 221 (82.9 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 76/302 (25%), Positives = 131/302 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D RG GLT I N ++ +R L N ++S+P S RL +++ N S +
Sbjct: 289 VDCRGKGLTAIPANMPESMTEIR---LEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIA 345
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L L + G + +T + +G F D + L NL
Sbjct: 346 PDAFHGLRSLNSLVLYG-NKITDLPRGVF-DGLSALELLLLNANKIHCVRVNVFQDLENL 403
Query: 312 YHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFC 367
L+L +N + ++ A ++T+ +A+NP C C + WL + L R N TS C
Sbjct: 404 SLLSLYDNKIQTLAKGTFAPLKSIQTLHLAQNPFVCDCGLKWLADFL-RSNPIETSGARC 462
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAG----LTNISDNAFRGLSGLRSLVLTDNRLQS--IP 421
+SP L K + + ++ C+ A + D + + R ++ +
Sbjct: 463 SSPRRLANKRISQIKSKKFRCSAAKEQYYIPGSEDTRMNKDCNSKPVCPPKCRCEATVVD 522
Query: 422 TKQLSKLTRLEE--------LEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKG 472
L +LT+ E L + N S+LEA G F+ L++LK++ ++ + +T + G
Sbjct: 523 CSNL-RLTKFPEHLPLSTTELRLNNNDLSILEATGLFRPLTHLKKINLSN-NKITEIEDG 580
Query: 473 AF 474
AF
Sbjct: 581 AF 582
Score = 174 (66.3 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 85/374 (22%), Positives = 150/374 (40%)
Query: 216 LVLTDNRLQSIPTKQLSK-LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L +N L + L + LT L+++ + N + +E G F+G S + L +T A+ L
Sbjct: 542 LRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLT-ANLLVS 600
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPE 333
VR G F + + GL N+ L+L +N ++ + P
Sbjct: 601 VRGGMFRGMDGLRMLMLRNNHIRC-VHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPN 659
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
L T+++ NP C C + WL E L R T C +PA L+ L ++ D C
Sbjct: 660 LSTLNLLANPFSCDCRLSWLGEWLRSRQIVTGNPRCQNPAFLREIPLQDVAKPDFICDKD 719
Query: 392 GLT-NIS----DNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLE 445
L ++S + + S+V N+ L ++P +T EL + N F +
Sbjct: 720 VLEQDVSCIPKPQCPEQCTCVDSVVRCSNKHLSALPRGVPLNVT---ELYLDGNVFVSIP 776
Query: 446 AGCFKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLP 503
+ LS ++L++ SN ++ + +F + I GL
Sbjct: 777 ----QELSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNALR-CIPPLVFGGLS 831
Query: 504 NLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVF 560
+L L+L N + + + L + I NP+ C C + WL + + +
Sbjct: 832 SLRLLSLHGNNISELHQQIFRDAASLSHLAIGANPLYCDCRLRWLSDWVKSGYKEPGIAR 891
Query: 561 CNSPAPLKYKSLIS 574
C P ++ K L++
Sbjct: 892 CAGPQGMEGKLLLT 905
Score = 174 (66.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 63/223 (28%), Positives = 96/223 (43%)
Query: 363 SAVFCNSPAPLKYKSL---ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
S V C+ L +KS+ I + E L LT+I + F GL LR L L DN++ S
Sbjct: 40 STVDCHG---LAFKSVPRNIPKTTERLDLNANNLTHIGKDDFAGLKHLRILHLMDNQIVS 96
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 479
I S L L+ L + +N L F L RL+++ +N+ + + AF
Sbjct: 97 IDRGAFSDLKELDRLRLNRNRLQQLPELLFLKNPALSRLDLS-ENNIQMIPRRAFRGATD 155
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPI 538
IE+ A + L L L N ++ S P+LRT + N +
Sbjct: 156 IKNLQLDKNHIS-CIEDGAFRAMRVLEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSL 214
Query: 539 ECGCNILWLREMLVRRNTSAVF--CNSPAPLKYKSLISLSAED 579
C C + WL + L +R ++ C+SPA L +L L +D
Sbjct: 215 RCDCQLSWLSQWLRQRPALGLYTQCSSPAHLHGLNLAELQKKD 257
Score = 154 (59.3 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 56/217 (25%), Positives = 90/217 (41%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 426
CNS K + D C+ LT ++ + LR L +N L + L
Sbjct: 504 CNSKPVCPPKCRCEATVVD--CSNLRLTKFPEHLPLSTTELR---LNNNDLSILEATGLF 558
Query: 427 K-LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
+ LT L+++ + N + +E G F+G S + L +T A+ L VR G F
Sbjct: 559 RPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLT-ANLLVSVRGGMFRGMDGLRMLML 617
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
+ + GL N+ L+L +N ++ + P L T+++ NP C C +
Sbjct: 618 RNNHIR-CVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNLLANPFSCDCRL 676
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL E L R T C +PA L+ L ++ D
Sbjct: 677 SWLGEWLRSRQIVTGNPRCQNPAFLREIPLQDVAKPD 713
Score = 144 (55.7 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 43/142 (30%), Positives = 64/142 (45%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ I + F GL LRIL+L DNQ+ S+ +F L L LR+ N L + F
Sbjct: 68 NNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFL 127
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
LS LDL + I AFRG + +++L L N + I + LE L +
Sbjct: 128 KNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNN 187
Query: 245 NGFSMLEAGCFKGLSYLKRLEI 266
N S + F + L+ +
Sbjct: 188 NNISAIPISSFNHMPKLRTFRL 209
Score = 139 (54.0 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 38/131 (29%), Positives = 62/131 (47%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
E +T +R L+ N ++SVP +F L + + N + +A AF+GL L++L L
Sbjct: 305 ESMTEIR---LEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLY 361
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T++ F GLS L L+L N++ + L L L + N L G F
Sbjct: 362 GNKITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTF 421
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 422 APLKSIQTLHL 432
Score = 136 (52.9 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 44/149 (29%), Positives = 70/149 (46%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I + F LR + L +NQ+ + +F L L L + N T L G F
Sbjct: 314 QNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKITDLPRGVF 373
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+GL L L L + + N F+ L L L L DN++Q++ + L ++ L +
Sbjct: 374 DGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLKSIQTLHLA 433
Query: 244 QNGFSMLEAGCFKGLS-YLKR--LEITGA 269
QN F + + G K L+ +L+ +E +GA
Sbjct: 434 QNPF-VCDCG-LKWLADFLRSNPIETSGA 460
Score = 133 (51.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 144 LYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L++N L + T F L L ++ + N T + DGAF G + L L L ++
Sbjct: 542 LRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSV 601
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
FRG+ GLR L+L +N ++ + S L + L + N S + G F L L
Sbjct: 602 RGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLS 661
Query: 263 RLEI 266
L +
Sbjct: 662 TLNL 665
Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
FP+ + S R N +S ++ F LT L+ + L +N++ + +F
Sbjct: 531 FPEHLPLSTTELR----LNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGAS 586
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
+ EL + N+ ++ G F G+ L L LR + + +++F GL +R L L DN+L
Sbjct: 587 SVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQL 646
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFS 248
+I L L L + N FS
Sbjct: 647 STIMPGAFDSLPNLSTLNLLANPFS 671
Score = 126 (49.4 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 45/172 (26%), Positives = 75/172 (43%)
Query: 92 EKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQL 151
E+L +L N+ H + + R + + N+I ID+ F L L L L+ N+L
Sbjct: 61 ERL-DLNANNLTHIGKDDFAGLKHLRILHLM-DNQIVSIDRGAFSDLKELDRLRLNRNRL 118
Query: 152 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLS 211
+ +P F+ L+ L + N + AF G + L L ++ I D AFR +
Sbjct: 119 QQLPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMR 178
Query: 212 GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
L L L +N + +IP + + +L + N L C LS+L +
Sbjct: 179 VLEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNS---LRCDC--QLSWLSQ 225
Score = 116 (45.9 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 36/137 (26%), Positives = 63/137 (45%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L+ N L + F L L L + N ++ GAF+ L L L L L +
Sbjct: 63 LDLNANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLP 122
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F L L L++N +Q IP + T ++ L++ +N S +E G F+ + L+
Sbjct: 123 ELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEV 182
Query: 264 LEITGASNLTRVRKGAF 280
L + +N++ + +F
Sbjct: 183 LTLNN-NNISAIPISSF 198
Score = 108 (43.1 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 37/161 (22%), Positives = 74/161 (45%)
Query: 39 IPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTW-LIIPI--GGFEPQEKLV 95
+P + + +RL L+ N + + + L+H+ + H I+ I G F ++L
Sbjct: 52 VPRNIPKTTERLDLNANNLTHIGK--DDFAGLKHLRILHLMDNQIVSIDRGAFSDLKELD 109
Query: 96 ELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRS 153
L+LN N+ P+ + + R+++ +N I I + F G T ++ L LD N +
Sbjct: 110 RLRLNRNRLQQLPELLFLKNPALSRLDL-SENNIQMIPRRAFRGATDIKNLQLDKNHISC 168
Query: 154 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+ +F + +L L + N + + +FN + +L L
Sbjct: 169 IEDGAFRAMRVLEVLTLNNNNISAIPISSFNHMPKLRTFRL 209
Score = 106 (42.4 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 62/249 (24%), Positives = 102/249 (40%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
+ RL L+ NR++ + + + +L +DLS +IP F + LQL+ N H
Sbjct: 108 LDRLRLNRNRLQQLPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKN-HI 166
Query: 106 PQQIVCSIISPRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
+ + R +E+ N IS I + F + LR L N LR S +L
Sbjct: 167 SCIEDGAFRAMRVLEVLTLNNNNISAIPISSFNHMPKLRTFRLHWNSLRCDCQLS--WLS 224
Query: 164 MLAELRVGLNVFTTLADGA-FNGLG--RLSALDLRGAGLTNISDNAFRGLSG----LRSL 216
R L ++T + A +GL L D AG + S SG + S
Sbjct: 225 QWLRQRPALGLYTQCSSPAHLHGLNLAELQKKDFTCAGALDSSPQPCGLASGSCPPMCSC 284
Query: 217 V--LTDNR---LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
+ D R L +IP +T E+ + QNG + G F L+R++++ +
Sbjct: 285 TNNIVDCRGKGLTAIPANMPESMT---EIRLEQNGIKSVPPGAFSSYKRLRRIDLSN-NQ 340
Query: 272 LTRVRKGAF 280
++ + AF
Sbjct: 341 ISEIAPDAF 349
Score = 103 (41.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + NVF ++ + +L LDL ++++++ +F +S L +L+L+ N L+
Sbjct: 762 VTELYLDGNVFVSIPQ-ELSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLILSYNALR 820
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L+ L L + N S L F+ + L L I GA+ L
Sbjct: 821 CIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAI-GANPL 867
Score = 98 (39.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 40/145 (27%), Positives = 65/145 (44%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQH---VDLSHTTWLIIPIGGFEPQE 92
L P H S L L+ N + ++ A ++ L H ++LS+ I G FE
Sbjct: 528 LTKFPEHLPLSTTELRLNNNDLSILE-ATGLFRPLTHLKKINLSNNKITEIEDGAFEGAS 586
Query: 93 KLVELQLNHNKHFPQQI-VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQL 151
+VEL L N + + + R+ + N I + + F GL +R+L L DNQL
Sbjct: 587 SVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQL 646
Query: 152 RSVPTPSFIYLGMLAELRVGLNVFT 176
++ +F L L+ L + N F+
Sbjct: 647 STIMPGAFDSLPNLSTLNLLANPFS 671
Score = 97 (39.2 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP++ S+ + L N IK+V A Y L+ +DLS+ I F L
Sbjct: 296 LTAIPANMPESMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSL 355
Query: 95 VELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L L NK P+ + + S + + N+I + F+ L L +L L DN+++
Sbjct: 356 NSLVLYGNKITDLPRGVFDGL-SALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQ 414
Query: 153 SVPTPSFIYLGMLAELRVGLNVF 175
++ +F L + L + N F
Sbjct: 415 TLAKGTFAPLKSIQTLHLAQNPF 437
Score = 68 (29.0 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 26/124 (20%), Positives = 52/124 (41%)
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADX 283
+S+P + + K T E L++ N + + F GL +L+ L + + + + +GAF+D
Sbjct: 50 KSVP-RNIPKTT--ERLDLNANNLTHIGKDDFAGLKHLRILHLMD-NQIVSIDRGAFSDL 105
Query: 284 XXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAEN 342
+ E + P L L+L EN + +++ + + +N
Sbjct: 106 KELDRLRLNRNRLQQ-LPELLFLKNPALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKN 164
Query: 343 PIEC 346
I C
Sbjct: 165 HISC 168
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 269 (99.8 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 89/318 (27%), Positives = 147/318 (46%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P +Q+L L N I V + + +L+ +DLSH + F L L+L HN
Sbjct: 241 PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNA 300
Query: 104 --HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ + +++ G NRI ++ + FEGL L +L L+DNQ+ V +F
Sbjct: 301 IASLRPRTFKDLHFLEELQL-GHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSG 359
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L +A + + N +L + F GL +L +L L + L ++ + F GLSGLR L L DN
Sbjct: 360 LFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 419
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
+ SI + L+ L+ L EL++ N + L F+GL +L+ L + + LT +
Sbjct: 420 SISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYL-LLSYNQLTTLSAEVLG 478
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 341
+ EG L L +L+L+ N+ +FS P L + +
Sbjct: 479 PLQRAFWLDISHNHLET-LAEGLFSSLGRLRYLSLRNNSLQTFSPQ----PGLERLWLDA 533
Query: 342 NPIECGCNILWLREMLVR 359
NP +C C + LR+ ++
Sbjct: 534 NPWDCSCPLKALRDFALQ 551
Score = 240 (89.5 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 105/400 (26%), Positives = 171/400 (42%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH 104
++ L L NR++ + + + SL + LS + G F+ L +L L N
Sbjct: 122 NLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSL 181
Query: 105 --FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
P + + + + + G N+++ + A F GL LR L L N LRSV F++L
Sbjct: 182 VVLPDTVFQGLGNLHELVLAG-NKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHL 240
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L +L + N+ T +A AF G+ L LDL + + ++ F GL GL L L N
Sbjct: 241 PRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNA 300
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
+ S+ + L LEEL++G N L F+GL L+ L + + +T VR GAF+
Sbjct: 301 IASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLND-NQITEVRVGAFSG 359
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAE 341
+ E GL L+ L+L+ + + LR + + +
Sbjct: 360 LFNVAVMNLSGNCLRS-LPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRD 418
Query: 342 NPIEC--GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
N I ++ L E+L T+ + P L ++ L L E L + LT +S
Sbjct: 419 NSISSIEEQSLAGLSELLELDLTTNRLTHLPRQL-FQGLGHL--EYLLLSYNQLTTLSAE 475
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L L ++ N L+++ S L RL L + N
Sbjct: 476 VLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNN 515
Score = 233 (87.1 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 103/422 (24%), Positives = 169/422 (40%)
Query: 137 GLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRG 196
GL L L+L+ N+LR++ F + LA L + N+ L +G F GL L L+L
Sbjct: 119 GLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGW 178
Query: 197 AGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 256
L + D F+GL L LVL N+L + L L EL++ +N ++A F
Sbjct: 179 NSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFV 238
Query: 257 GLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNL 316
L L++L + + +T V AF +E+ GL L+ L L
Sbjct: 239 HLPRLQKLYLD-RNLITAVAPRAFLGMKALRWLDLSHNRVAGLMED-TFPGLLGLHVLRL 296
Query: 317 KENAFTSFS-ESMLAWPELRTIDIAENPI-ECGCNI---LWLREMLVRRNTSAVFCNSPA 371
NA S + L + + N I + G L E+L + A
Sbjct: 297 AHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGA 356
Query: 372 PLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 431
+ L +++ +L +G L ++ + F+GL L SL L + L + + L+ L
Sbjct: 357 ---FSGLFNVAVMNL--SGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGL 411
Query: 432 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 491
L + N S +E GLS L L++T + LT + + F
Sbjct: 412 RRLFLRDNSISSIEEQSLAGLSELLELDLT-TNRLTHLPRQLFQGLGHLEYLLLSYNQLT 470
Query: 492 XIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIEC-----GCNIL 545
+ E L L + L++ N + +E + + LR + + N ++ G L
Sbjct: 471 TLSAE-VLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFSPQPGLERL 529
Query: 546 WL 547
WL
Sbjct: 530 WL 531
Score = 231 (86.4 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 118/476 (24%), Positives = 190/476 (39%)
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
H P I +S R + + G N +S I A F+ L++L L L + LRS+ + + L
Sbjct: 66 HLPDDIP---VSTRALWLDGNN-LSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQ 121
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + N LA G F L++L L L + + F+GLS L L L N L
Sbjct: 122 NLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSL 181
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADX 283
+P L L EL + N + L+ F GL L+ L+++ + L V+ F
Sbjct: 182 VVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLS-RNALRSVKANVFVHL 240
Query: 284 XXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAEN 342
+ A +G+ L L+L N E L + +A N
Sbjct: 241 PRLQKLYLDRNLITA-VAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHN 299
Query: 343 PI-----ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNIS 397
I ++ +L E+ + N ++ L L E L +T +
Sbjct: 300 AIASLRPRTFKDLHFLEELQLGHNR----IRQLGERTFEGLGQL--EVLTLNDNQITEVR 353
Query: 398 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 457
AF GL + + L+ N L+S+P + L +L L + + + F GLS L+R
Sbjct: 354 VGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRR 413
Query: 458 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTS 517
L + S ++ + + + A + + GL +L +L L N T+
Sbjct: 414 LFLRDNS-ISSIEEQSLAGLSELLELDLTTNRLTHLPRQ-LFQGLGHLEYLLLSYNQLTT 471
Query: 518 FSESMLAWPELRT--IDIAENPIECGCNILW-----LREMLVRRNTSAVFCNSPAP 566
S +L P R +DI+ N +E L+ LR + +R N+ F SP P
Sbjct: 472 LSAEVLG-PLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTF--SPQP 524
Score = 203 (76.5 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 105/426 (24%), Positives = 168/426 (39%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N +++ AF L L L+L+G+ L ++ A GL L L L NRL+++ +
Sbjct: 83 NNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVGLFT 142
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
L L + N LE G F+GLS+L L + G ++L + F
Sbjct: 143 HTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNL-GWNSLVVLPDTVFQ----------- 190
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIEC-GCNI 350
GL NL+ L L N T ++ ELR +D++ N + N+
Sbjct: 191 --------------GLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANV 236
Query: 351 LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSL 410
L + + AP + + +L DL + + + ++ F GL GL L
Sbjct: 237 FVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDL--SHNRVAGLMEDTFPGLLGLHVL 294
Query: 411 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 470
L N + S+ + L LEEL++G N L F+GL L+ L + + +T VR
Sbjct: 295 RLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLND-NQITEVR 353
Query: 471 KGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELR 529
GAF+ + E GL L+ L+L+ + + LR
Sbjct: 354 VGAFSGLFNVAVMNLSGNCLRSLPER-VFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLR 412
Query: 530 TIDIAENPIEC--GCNILWLREMLVRRNTSAVFCNSPAPL------------KYKSLISL 575
+ + +N I ++ L E+L T+ + P L Y L +L
Sbjct: 413 RLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTL 472
Query: 576 SAEDLG 581
SAE LG
Sbjct: 473 SAEVLG 478
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
L ++ + F GLSGLR L L DN + SI + L+ L+ L EL++ N + L F+GL
Sbjct: 397 LGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGL 456
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
+L+ L + + LT + + E L L +L+L+
Sbjct: 457 GHLEYL-LLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE-GLFSSLGRLRYLSLRN 514
Query: 513 NAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVR 553
N+ +FS P L + + NP +C C + LR+ ++
Sbjct: 515 NSLQTFSPQ----PGLERLWLDANPWDCSCPLKALRDFALQ 551
Score = 122 (48.0 bits), Expect = 0.00043, P = 0.00043
Identities = 48/177 (27%), Positives = 74/177 (41%)
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
+VFC+S I +S L G L++I AF+ LS L L L + L+S+ +
Sbjct: 56 SVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQ 115
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT-RVRKGAFADXXXXXX 482
L L L L + +N L G F L L ++ SNL R+ +G F
Sbjct: 116 ALLGLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLS--SNLLGRLEEGLF-QGLSHLW 172
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPI 538
++ + GL NL+ L L N T ++ ELR +D++ N +
Sbjct: 173 DLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNAL 229
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 275 (101.9 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 101/421 (23%), Positives = 179/421 (42%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L ++ I AF+ L L L L N+LQ +P
Sbjct: 71 NNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
+L L++ +N + F+G++ +K L++ ++++ + GAF
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDN-NHISCIEDGAFR-ALRDLEILTL 188
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-----PELRTID---IAENPI 344
I + +P + L L N + + LAW + RTI + P+
Sbjct: 189 NNNNISRILVTSFNHMPKIRTLRLHSNHL--YCDCHLAWLSDWLRQRRTIGQFTLCMAPV 246
Query: 345 EC-GCNILWLRE---MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
G ++ +++ + ++ A CN+ + L S S S + C G GLT I N
Sbjct: 247 HLRGFSVADVQKKEYVCPGPHSEAPACNANS-LSCPSACSCSNNIVDCRGKGLTEIPANL 305
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
G+ +R L N ++SIP ++ +L+ ++I +N S + F+GL L L +
Sbjct: 306 PEGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVL 362
Query: 461 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE 520
G + +T + KG F D + + L NL L+L +N + S+
Sbjct: 363 YG-NKITEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK 420
Query: 521 SMLA-WPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSLISLSA 577
+ ++T+ +A+NP C C++ WL + L TS C+SP L K + + +
Sbjct: 421 GLFVPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKS 480
Query: 578 E 578
+
Sbjct: 481 K 481
Score = 206 (77.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 75/291 (25%), Positives = 125/291 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL +T I+ F GL LR L L DN++ I L +LE L + +N +L
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L RL+++ + + + + AF IE+GA L +L
Sbjct: 126 ELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGVTGVKNLQLDNNHISC-IEDGAFRALRDL 183
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N + S P++RT+ + N + C C++ WL + L +R T F C
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCM 243
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
+P L+ S+ + ++ C G + NA LS S N + K L+++
Sbjct: 244 APVHLRGFSVADVQKKEYVCPGPHSEAPACNA-NSLS-CPSACSCSNNIVDCRGKGLTEI 301
Query: 429 TR-----LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ E+ + QN + AG F LKR++I+ + ++ + AF
Sbjct: 302 PANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDIS-KNQISDIAPDAF 351
Score = 187 (70.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 82/371 (22%), Positives = 144/371 (38%)
Query: 216 LVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L DN + + T KL L ++ + N + G F G + ++ L +TG N
Sbjct: 537 LRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTG--NQLE 594
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPE 333
G + GL ++ L+L +N T+ + +
Sbjct: 595 TMHGRMFRGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAG- 390
L TI++ NP C C++ WL L +R + C P LK + ++ +D C G
Sbjct: 655 LSTINLLSNPFNCNCHMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Query: 391 -AGLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
+S + + ++V NR L ++P K + K + EL + N + +
Sbjct: 715 EESSCQLSPRCPEQCTCVETVVRCSNRGLHALP-KGMPK--DVTELYLEGNHLTAVP--- 768
Query: 449 FKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
K LS ++L + SN ++ + F++ I A GL +L
Sbjct: 769 -KELSAFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRLR-CIPVHAFNGLRSLR 826
Query: 507 HLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNS 563
L L N +S E S L + + NP+ C C++ WL E + + C+S
Sbjct: 827 VLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSS 886
Query: 564 PAPLKYKSLIS 574
P + + L++
Sbjct: 887 PESMADRLLLT 897
Score = 176 (67.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 47/153 (30%), Positives = 74/153 (48%)
Query: 116 PRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
PR E +N I+RI + F GL LR+L+L+DNQ+ + +F L L LR+ N
Sbjct: 60 PRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKN 119
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L + F +L+ LDL + I AFRG++G+++L L +N + I
Sbjct: 120 KLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRA 179
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L LE L + N S + F + ++ L +
Sbjct: 180 LRDLEILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 168 (64.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 88/399 (22%), Positives = 150/399 (37%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
+ +I AF L+ + ++ N++ I L L L + N + + G F GL
Sbjct: 319 IKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGL 378
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
L+ L + A+ + +R F D I +G V L ++ L+L +
Sbjct: 379 VSLQLL-LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGLFVPLQSIQTLHLAQ 436
Query: 319 NAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNT---SAVF-CNSPAPL 373
N F + L W L + +NPIE G R + +R + S F C+
Sbjct: 437 NPFVC--DCHLKW--LADY-LQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDY 491
Query: 374 K--YKS---LISLSAEDLGCAGAGLTNISDNAFRGLSGL----RSLVLTDNRLQSIP-TK 423
+ + S + + E C G + + R S L L L DN + + T
Sbjct: 492 RNRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYTTDLRLNDNDISVLEATG 551
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
KL L ++ + N + G F G + ++ L +TG N G
Sbjct: 552 IFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTG--NQLETMHGRMFRGLSSLKT 609
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGC 542
+ D GL ++ L+L +N T+ + + L TI++ NP C C
Sbjct: 610 LMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNC 669
Query: 543 NILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
++ WL L +R + C P LK + ++ +D
Sbjct: 670 HMAWLGRWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Score = 158 (60.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I +AE L +T I+ F GL LR L L DN++ I L +LE L + +
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSIIERGAFQDLKQLERLRLNK 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N +L F+ L RL+++ + + + + AF IE+ A
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGVTGVKNLQLDNNHIS-CIEDGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L +L L L N + S P++RT+ + N + C C++ WL + L +R T
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTI 236
Query: 558 AVF--CNSPAPLKYKSLISLSAED 579
F C +P L+ S+ + ++
Sbjct: 237 GQFTLCMAPVHLRGFSVADVQKKE 260
Score = 140 (54.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
EG+ +R L+ N ++S+P +F L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T I F GL L+ L+L N++ + L L L + N + G F
Sbjct: 364 GNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 424 VPLQSIQTLHL 434
Score = 127 (49.8 bits), Expect = 0.00039, P = 0.00039
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ L LR + L +N+++ V +F + EL + N T+ F
Sbjct: 542 NDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMF 601
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ +S++ F GLS +R L L DNR+ +I + L L + +
Sbjct: 602 RGLSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLL 661
Query: 244 QNGFS 248
N F+
Sbjct: 662 SNPFN 666
Score = 126 (49.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 40/130 (30%), Positives = 57/130 (43%)
Query: 119 VEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
VEI QN I I F L+ + + NQ+ + +F L L L + N T
Sbjct: 310 VEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ G F+GL L L L + + N F+ L L L L DN+LQ+I L +
Sbjct: 370 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSI 429
Query: 238 EELEIGQNGF 247
+ L + QN F
Sbjct: 430 QTLHLAQNPF 439
Score = 119 (46.9 bits), Expect = 9.8e-18, Sum P(2) = 9.8e-18
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
RV N++S I++ F+ L L L L+ N+L+ +P F L L + N
Sbjct: 88 RVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQG 147
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ AF G+ + L L ++ I D AFR L L L L +N + I + + ++
Sbjct: 148 IPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKI 207
Query: 238 EELEIGQN 245
L + N
Sbjct: 208 RTLRLHSN 215
Score = 119 (46.9 bits), Expect = 9.8e-18, Sum P(2) = 9.8e-18
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTN---RIKTVDSAIPIYLSLQHVDL 75
P++ + S + L +P + +RL L N RI +D A L + H++
Sbjct: 35 PTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLED 94
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQA 133
+ + II G F+ ++L L+LN NK P+ + S R+++ +N+I I +
Sbjct: 95 NQVS--IIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDL-SENQIQGIPRK 151
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F G+T ++ L LD+N + + +F L L L + N + + +FN + ++ L
Sbjct: 152 AFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLR 211
Query: 194 L 194
L
Sbjct: 212 L 212
Score = 111 (44.1 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 40/160 (25%), Positives = 73/160 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSH 77
PS S + + + L IP++ I + L N IK++ + A Y L+ +D+S
Sbjct: 281 PSACSCSNNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISK 340
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I F+ + L L L NK P+ + ++S + + + N+I+ + F
Sbjct: 341 NQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLL-LLNANKINCLRVNTF 399
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ L L +L L DN+L+++ F+ L + L + N F
Sbjct: 400 QDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQNPF 439
Score = 103 (41.3 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ L L L +NQ++ +P +F + + L++ N + + DGAF
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIEDGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L ++ I +F + +R+L L N L
Sbjct: 178 RALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 96 (38.9 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 40/170 (23%), Positives = 75/170 (44%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIG 86
P+CN AN PS + S + + + + +P + + L + IP G
Sbjct: 271 PACN---ANSLSCPSACSCSNNIVDCRGKGLTEIPANLPE--GIVEIRLEQNSIKSIPAG 325
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F +KL + ++ N+ + S + ++G N+I+ I + F+GL +L++L
Sbjct: 326 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYG-NKITEIPKGLFDGLVSLQLL 384
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
L+ N++ + +F L L L + N T++ G F L + L L
Sbjct: 385 LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHL 434
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 272 (100.8 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 92/352 (26%), Positives = 152/352 (43%)
Query: 46 SIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEK-LVELQLNHNK 103
S++ L LS N I V ++ P ++ ++L+ + +G F+ + L+ L+L+ N+
Sbjct: 140 SLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNR 199
Query: 104 HFPQQIVCSIISPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
Q V + PR ++ +NRI I+ F+GL +L +L L N + + +F L
Sbjct: 200 -ITQLPVRAFKLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGL 258
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
+ L + N + G+ GL L L L + I + L LVL+ N
Sbjct: 259 SKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNN 318
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI--TGASNLTRVRKGAF 280
L + + L++L+ L L + N S + G FKGL L+ L++ S GAF
Sbjct: 319 LTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAF 378
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDI 339
+ + + A GL L HLNL NA S ++ + L+ + I
Sbjct: 379 SGLDSLSKLTLFGNKIKS-VAKRAFSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHI 437
Query: 340 AENPIECGCNILWLREMLVRRNTSAVF---CNSPAPLKYKSLISLSAEDLGC 388
+ + C C + WL L+ R A C P LK +S+ S+ E C
Sbjct: 438 SSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHPESLKGQSIFSVPPESFVC 489
Score = 227 (85.0 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 98/420 (23%), Positives = 157/420 (37%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N + + F L L + L LT + S + SL L N+++S+
Sbjct: 73 LNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSLGAAS-SHVVSLFLQHNKIRSVE 131
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 287
QL LE L++ N + + CF +K L + G + + + GAF
Sbjct: 132 GSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAG-NRIGTLELGAFDGLSRSL 190
Query: 288 XXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPI-E 345
+ A LP L L+L N + L + + N I +
Sbjct: 191 LTLRLSKNRITQLPVRAFK-LPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISK 249
Query: 346 CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGL 404
W L + + + NS + SL L+A L + + I +
Sbjct: 250 LTDGAFW---GLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFC 306
Query: 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI--TG 462
L LVL+ N L + + L++L+ L L + N S + G FKGL L+ L++
Sbjct: 307 QKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNE 366
Query: 463 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ES 521
S GAF+ + + A GL L HLNL NA S ++
Sbjct: 367 ISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKR-AFSGLEGLEHLNLGGNAIRSVQFDA 425
Query: 522 MLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF---CNSPAPLKYKSLISLSAE 578
+ L+ + I+ + C C + WL L+ R A C P LK +S+ S+ E
Sbjct: 426 FVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVTATCAHPESLKGQSIFSVPPE 485
Score = 226 (84.6 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 89/329 (27%), Positives = 149/329 (45%)
Query: 144 LYLDDNQLRSVPTPSF-IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L+L N++RSV YL L L + LN T + + F + L+L G + +
Sbjct: 120 LFLQHNKIRSVEGSQLKAYLS-LEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTL 178
Query: 203 SDNAFRGLS-GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
AF GLS L +L L+ NR+ +P + KL RL +L++ +N ++E F+GL+ L
Sbjct: 179 ELGAFDGLSRSLLTLRLSKNRITQLPVRAF-KLPRLTQLDLNRNRIRLIEGLTFQGLNSL 237
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
+ L++ +N++++ GAF + G+L GL L+ L+L N+
Sbjct: 238 EVLKLQ-RNNISKLTDGAFWGLSKMHVLHLEYNSLVE-VNSGSLYGLTALHQLHLSNNSI 295
Query: 322 TSFSESMLAW-PELRTIDIAENPIEC--GCNILWLREMLVRRNTSAVFCNSPAPLKYKSL 378
++ +L + ++ N + ++ L + V R S + A +K L
Sbjct: 296 ARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLR-LSHNSISHIAEGAFKGL 354
Query: 379 ISLSAEDLGCAG-AGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 437
SL DL +G + AF GL L L L N+++S+ + S L LE L +G
Sbjct: 355 RSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLG 414
Query: 438 QNGFSMLEAGCFKGLSYLKRLEITGASNL 466
N ++ F + LK L I+ S L
Sbjct: 415 GNAIRSVQFDAFVKMKNLKELHISSDSFL 443
Score = 211 (79.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 101/377 (26%), Positives = 155/377 (41%)
Query: 73 VDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQ-NRISRID 131
++LS+ I GFE L E+ LN+N+ + S V +F Q N+I ++
Sbjct: 73 LNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSL-GAASSHVVSLFLQHNKIRSVE 131
Query: 132 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LS 190
+ + +L +L L N + V F + + EL + N TL GAF+GL R L
Sbjct: 132 GSQLKAYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLL 191
Query: 191 ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L L +T + AF+ L L L L NR++ I L LE L++ +N S L
Sbjct: 192 TLRLSKNRITQLPVRAFK-LPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKL 250
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
G F GLS + L + ++L V G+ +G
Sbjct: 251 TDGAFWGLSKMHVLHLE-YNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSF-CQK 308
Query: 311 LYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIEC---GC--NILWLREMLVRRNTSA 364
L+ L L N T E LA L + ++ N I G + LR + + N +
Sbjct: 309 LHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEIS 368
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 424
+ + L SLS L G + +++ AF GL GL L L N ++S+
Sbjct: 369 GTIEDTSGA-FSGLDSLSK--LTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRSVQFDA 425
Query: 425 LSKLTRLEELEIGQNGF 441
K+ L+EL I + F
Sbjct: 426 FVKMKNLKELHISSDSF 442
Score = 208 (78.3 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 89/328 (27%), Positives = 147/328 (44%)
Query: 30 NLQEANLD-----VIPSHSNPS--IQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWL 81
NLQE L+ +PS S + L L N+I++V+ S + YLSL+ +DLS
Sbjct: 93 NLQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNIT 152
Query: 82 IIPIGGFEPQEKLVELQLNHNKHFPQQI-VCSIISPRRVEI-FGQNRISRIDQACFEGLT 139
+ F + EL L N+ ++ +S + + +NRI+++ F+ L
Sbjct: 153 EVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAFK-LP 211
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
L L L+ N++R + +F L L L++ N + L DGAF GL ++ L L L
Sbjct: 212 RLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSL 271
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
++ + GL+ L L L++N + I K S +L EL + N + L+ LS
Sbjct: 272 VEVNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELS 331
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE--GALVGLPNLYHLNLK 317
L L ++ S ++ + +GAF IE+ GA GL +L L L
Sbjct: 332 SLSVLRLSHNS-ISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLF 390
Query: 318 ENAFTSFSESMLAWPE-LRTIDIAENPI 344
N S ++ + E L +++ N I
Sbjct: 391 GNKIKSVAKRAFSGLEGLEHLNLGGNAI 418
Score = 188 (71.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 85/356 (23%), Positives = 151/356 (42%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N++S ID A FE L L+ +YL++N+L +VP+ +++ L + N ++
Sbjct: 78 NKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSLGAASSHVVS-LFLQHNKIRSVEGSQLK 136
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR-LEELEIG 243
L LDL +T + + F ++ L L NR+ ++ L+R L L +
Sbjct: 137 AYLSLEVLDLSLNNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLS 196
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
+N + L FK L L +L++ N R+ +G + +G
Sbjct: 197 KNRITQLPVRAFK-LPRLTQLDLN--RNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDG 253
Query: 304 ALVGLPNLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNT 362
A GL ++ L+L+ N+ S S+ L + ++ N I W + +
Sbjct: 254 AFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGW--SFCQKLHE 311
Query: 363 SAVFCNSPAPLKYKSLISLSAED-LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI- 420
+ N+ L +SL LS+ L + +++I++ AF+GL LR L L N +
Sbjct: 312 LVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTI 371
Query: 421 --PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ S L L +L + N + F GL L+ L + G + + V+ AF
Sbjct: 372 EDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNL-GGNAIRSVQFDAF 426
Score = 146 (56.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 82/355 (23%), Positives = 137/355 (38%)
Query: 191 ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
+L+L L+ I F L L+ + L +N L ++P+ + + + L + N +
Sbjct: 72 SLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSLGAAS-SHVVSLFLQHNKIRSV 130
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP- 309
E K L+ L+++ +N+T VR F +E GA GL
Sbjct: 131 EGSQLKAYLSLEVLDLS-LNNITEVRNTCFPHGPPIKELNLAGNRIGT-LELGAFDGLSR 188
Query: 310 NLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC--GCNILWLREMLVRRNTSAVFC 367
+L L L +N T P L +D+ N I G L + V +
Sbjct: 189 SLLTLRLSKNRITQLPVRAFKLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQR---- 244
Query: 368 NSPAPLKYKSLISLSAED-LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 426
N+ + L + LS L L ++ + GL+ L L L++N + I K S
Sbjct: 245 NNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIHRKGWS 304
Query: 427 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 486
+L EL + N + L+ LS L L ++ S ++ + +GAF
Sbjct: 305 FCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNS-ISHIAEGAFKGLRSLRVLDLD 363
Query: 487 XXXXXXIIEED--ALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPI 538
IE+ A GL +L L L N S ++ + E L +++ N I
Sbjct: 364 HNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAI 418
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 267 (99.0 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 88/318 (27%), Positives = 147/318 (46%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P +Q+L L N I V + + +L+ +DLSH + F L L+L HN
Sbjct: 242 PRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHNA 301
Query: 104 --HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ + +++ G NRI ++ + FEGL L +L L+DNQ+ V +F
Sbjct: 302 IASLRPRTFKDLHFLEELQL-GHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSG 360
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L +A + + N +L + F GL +L +L L + L ++ + F GLSGLR L L DN
Sbjct: 361 LFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 420
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
+ SI + L+ L+ L EL++ N + L F+GL +L+ L + + LT +
Sbjct: 421 SISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYL-LLSYNQLTTLSAEVLG 479
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 341
+ EG L + +L+L+ N+ +FS P L + +
Sbjct: 480 PLQRAFWLDISHNHLET-LAEGLFSSLGRVRYLSLRNNSLQTFSPQ----PGLERLWLDA 534
Query: 342 NPIECGCNILWLREMLVR 359
NP +C C + LR+ ++
Sbjct: 535 NPWDCSCPLKALRDFALQ 552
Score = 244 (91.0 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 110/419 (26%), Positives = 179/419 (42%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPI 85
NLQ + L + + +Q L L NR++ + + + SL + LS +
Sbjct: 104 NLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEE 163
Query: 86 GGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G F+ L +L L N P + + + + + G N+++ + A F GL LR
Sbjct: 164 GLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAG-NKLTYLQPALFCGLGELRE 222
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N LRSV F++L L +L + N+ T +A GAF G+ L LDL + +
Sbjct: 223 LDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLM 282
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL GL L L N + S+ + L LEEL++G N L F+GL L+
Sbjct: 283 EDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEV 342
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
L + + +T VR GAF+ + E GL L+ L+L+ +
Sbjct: 343 LTLND-NQITEVRVGAFSGLFNVAVMNLSGNCLRS-LPERVFQGLDKLHSLHLEHSCLGH 400
Query: 324 FS-ESMLAWPELRTIDIAENPIEC--GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLIS 380
+ LR + + +N I ++ L E+L T+ + P L ++ L
Sbjct: 401 VRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQL-FQGLGH 459
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L E L + LT +S L L ++ N L+++ S L R+ L + N
Sbjct: 460 L--EYLLLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNN 516
Score = 234 (87.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 118/476 (24%), Positives = 191/476 (40%)
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
H P I +S R + + G N +S I A F+ L++L L L + LRS+ + + L
Sbjct: 67 HLPDDIP---VSTRALWLDGNN-LSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQ 122
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + N LA G F L++L L L + + F+GLS L L L N L
Sbjct: 123 NLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNLGWNSL 182
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADX 283
+P L L EL + N + L+ F GL L+ L+++ + L V+ F
Sbjct: 183 VVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLS-RNALRSVKANVFVHL 241
Query: 284 XXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAEN 342
+ GA +G+ L L+L N E L + +A N
Sbjct: 242 PRLQKLYLDRNLITA-VAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAHN 300
Query: 343 PI-----ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNIS 397
I ++ +L E+ + N ++ L L E L +T +
Sbjct: 301 AIASLRPRTFKDLHFLEELQLGHNR----IRQLGERTFEGLGQL--EVLTLNDNQITEVR 354
Query: 398 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 457
AF GL + + L+ N L+S+P + L +L L + + + F GLS L+R
Sbjct: 355 VGAFSGLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRR 414
Query: 458 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTS 517
L + S ++ + + + A + + GL +L +L L N T+
Sbjct: 415 LFLRDNS-ISSIEEQSLAGLSELLELDLTTNRLTHLPRQ-LFQGLGHLEYLLLSYNQLTT 472
Query: 518 FSESMLAWPELRT--IDIAENPIECGCNILW-----LREMLVRRNTSAVFCNSPAP 566
S +L P R +DI+ N +E L+ +R + +R N+ F SP P
Sbjct: 473 LSAEVLG-PLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSLQTF--SPQP 525
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 105/426 (24%), Positives = 168/426 (39%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N +++ AF L L L+L+G+ L ++ A GL L L L NRL+++ +
Sbjct: 84 NNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFT 143
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
L L + N LE G F+GLS+L L + G ++L + F
Sbjct: 144 HTPSLASLSLSSNLLGRLEEGLFQGLSHLWDLNL-GWNSLVVLPDTVFQ----------- 191
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIEC-GCNI 350
GL NL+ L L N T ++ ELR +D++ N + N+
Sbjct: 192 --------------GLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANV 237
Query: 351 LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSL 410
L + + AP + + +L DL + + + ++ F GL GL L
Sbjct: 238 FVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDL--SHNRVAGLMEDTFPGLLGLHVL 295
Query: 411 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 470
L N + S+ + L LEEL++G N L F+GL L+ L + + +T VR
Sbjct: 296 RLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLND-NQITEVR 354
Query: 471 KGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELR 529
GAF+ + E GL L+ L+L+ + + LR
Sbjct: 355 VGAFSGLFNVAVMNLSGNCLRSLPER-VFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLR 413
Query: 530 TIDIAENPIEC--GCNILWLREMLVRRNTSAVFCNSPAPL------------KYKSLISL 575
+ + +N I ++ L E+L T+ + P L Y L +L
Sbjct: 414 RLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTL 473
Query: 576 SAEDLG 581
SAE LG
Sbjct: 474 SAEVLG 479
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 43/161 (26%), Positives = 73/161 (45%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
L ++ + F GLSGLR L L DN + SI + L+ L+ L EL++ N + L F+GL
Sbjct: 398 LGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGL 457
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
+L+ L + + LT + + E L + +L+L+
Sbjct: 458 GHLEYL-LLSYNQLTTLSAEVLGPLQRAFWLDISHNHLETLAE-GLFSSLGRVRYLSLRN 515
Query: 513 NAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVR 553
N+ +FS P L + + NP +C C + LR+ ++
Sbjct: 516 NSLQTFSPQ----PGLERLWLDANPWDCSCPLKALRDFALQ 552
Score = 120 (47.3 bits), Expect = 0.00072, P = 0.00072
Identities = 48/177 (27%), Positives = 74/177 (41%)
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
+VFC+S I +S L G L++I AF+ LS L L L + L+S+ +
Sbjct: 57 SVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQ 116
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT-RVRKGAFADXXXXXX 482
L L L L + +N L G F L L ++ SNL R+ +G F
Sbjct: 117 ALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLS--SNLLGRLEEGLF-QGLSHLW 173
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPI 538
++ + GL NL+ L L N T ++ ELR +D++ N +
Sbjct: 174 DLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNAL 230
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 240 (89.5 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 105/422 (24%), Positives = 171/422 (40%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N T + F GL +L L L + + AF + L L L N+LQ +P
Sbjct: 66 LELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLP 125
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 287
L L++ +N + F+G + LK L++ + ++ + +GAF
Sbjct: 126 ELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLD-KNRISCIEEGAFR-ALRGL 183
Query: 288 XXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE--LR---TIDI--- 339
I + +P L L N F + LAW LR TI +
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL--FCDCHLAWLSQWLRQRPTIGLFTQ 241
Query: 340 AENPIEC-GCNILWLREMLVRRNTSAVFCNSPA-PLKYKS---LISLSAEDLGCAGAGLT 394
P G N+ +++ + +PA L S + S S+ + C G GLT
Sbjct: 242 CSGPASLRGLNVAEVQKGEFSCSGQGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGLT 301
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I N ++ +R L L N ++SIP S +L +++ N + + F+GL
Sbjct: 302 AIPANLPETMTEIR-LEL--NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRS 358
Query: 455 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENA 514
L L + G + +T + +G F I DA L NL L+L +N
Sbjct: 359 LNSLVLYG-NKITDLPRGVFGGLYTLQLLLLNANKIN-CIRPDAFQDLQNLSLLSLYDNK 416
Query: 515 FTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPLKYK 570
S ++ + + ++T+ +A+NP C CN+ WL + L R N T+ C SP L K
Sbjct: 417 IQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFL-RTNPIETTGARCASPRRLANK 475
Query: 571 SL 572
+
Sbjct: 476 RI 477
Score = 218 (81.8 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 90/401 (22%), Positives = 167/401 (41%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL-SKLTRLEELEIGQNGFS 248
S ++ L+ I + + + LR L +N + + L KL+ L+++ + N S
Sbjct: 522 SVVECSSLKLSKIPERIPQSTTELR---LNNNEISILEATGLFKKLSHLKKINLSNNKVS 578
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+E G F+G + + L +T A+ L +R G F I + GL
Sbjct: 579 EIEDGTFEGAASVSELHLT-ANQLESIRSGMFRGLDGLRTLMLRNNRISC-IHNDSFTGL 636
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAV 365
N+ L+L +N T+ S L T+++ NP C C++ WL + L +R T
Sbjct: 637 RNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNP 696
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNIS----DNAFRGLSGLRSLVLTDNR-LQSI 420
C +P L+ L ++ D C G + + + L ++V N+ LQ++
Sbjct: 697 RCQNPDFLRQIPLQDVAFPDFRCE-EGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQAL 755
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 480
P K + K + EL + N F+++ G YL+ ++++ + ++ + +F +
Sbjct: 756 P-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NKISSLSNSSFTNMSQL 810
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
I A GL +L L+L N ++ E + A L + I NP+
Sbjct: 811 TTLILSYNALQ-CIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLY 869
Query: 540 CGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAE 578
C C + WL + + C P ++ K L++ A+
Sbjct: 870 CDCRLRWLSSWVKTGYKEPGIARCAGPPEMEGKLLLTTPAK 910
Score = 178 (67.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 56/193 (29%), Positives = 84/193 (43%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I + E L G +T I N F GL LR L L +N++ ++ + LE L + +
Sbjct: 59 IPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNR 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N +L F+ L RL+++ + L V + AF IEE A
Sbjct: 119 NQLQVLPELLFQNNQALSRLDLS-ENFLQAVPRKAFRGATDLKNLQLDKNRIS-CIEEGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L L L L N T+ S P+LRT + N + C C++ WL + L +R T
Sbjct: 177 FRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTI 236
Query: 558 AVF--CNSPAPLK 568
+F C+ PA L+
Sbjct: 237 GLFTQCSGPASLR 249
Score = 164 (62.8 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 54/217 (24%), Positives = 92/217 (42%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL- 425
C S +K S + C+ L+ I + + + LR L +N + + L
Sbjct: 507 CTSDVACPHKCRCEASVVE--CSSLKLSKIPERIPQSTTELR---LNNNEISILEATGLF 561
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
KL+ L+++ + N S +E G F+G + + L +T A+ L +R G F
Sbjct: 562 KKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLT-ANQLESIRSGMFRGLDGLRTLML 620
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
I D+ GL N+ L+L +N T+ S L T+++ NP C C++
Sbjct: 621 RNNRIS-CIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHL 679
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL + L +R T C +P L+ L ++ D
Sbjct: 680 SWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPD 716
Score = 161 (61.7 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 47/149 (31%), Positives = 70/149 (46%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+E+ G N I+RI + F GL LR+L L +NQ+ +V +F + L LR+ N
Sbjct: 65 RLELNGNN-ITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQV 123
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
L + F LS LDL L + AFRG + L++L L NR+ I L L
Sbjct: 124 LPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGL 183
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
E L + N + + F + L+ +
Sbjct: 184 EVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 147 (56.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFN 184
++S+I + + T LR L++N++ + T F L L ++ + N + + DG F
Sbjct: 530 KLSKIPERIPQSTTELR---LNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFE 586
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
G +S L L L +I FRGL GLR+L+L +NR+ I + L + L +
Sbjct: 587 GAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYD 646
Query: 245 NGFSMLEAGCFKGLSYLKRLEI 266
N + + G F L L L +
Sbjct: 647 NHITTISPGAFDTLQALSTLNL 668
Score = 132 (51.5 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 47/149 (31%), Positives = 67/149 (44%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I I F LR + L +NQ+ + +F L L L + N T L G F
Sbjct: 319 NGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFG 378
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L + I +AF+ L L L L DN++QS+ + L ++ L + Q
Sbjct: 379 GLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQ 438
Query: 245 NGFSMLEAGC-FKGLS-YLKR--LEITGA 269
N F C K L+ +L+ +E TGA
Sbjct: 439 NPFI---CDCNLKWLADFLRTNPIETTGA 464
Score = 132 (51.5 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I +++ F+ + L L L+ NQL+ +P F L+ L + N + AF
Sbjct: 94 ENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAF 153
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
G L L L ++ I + AFR L GL L L +N + +IP + + +L +
Sbjct: 154 RGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLH 213
Query: 244 QN 245
N
Sbjct: 214 SN 215
Score = 130 (50.8 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ LN ++ GAF+ +L +DL + I+ +AF+GL L SLVL N++
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+P L L+ L + N + + F+ L L L + + + + KG F
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYD-NKIQSLAKGTF 425
Score = 123 (48.4 bits), Expect = 9.9e-17, Sum P(3) = 9.9e-17
Identities = 37/131 (28%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
E +T +R L+ N ++S+P +F L + + N +A AF GL L++L L
Sbjct: 309 ETMTEIR---LELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLY 365
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T++ F GL L+ L+L N++ I L L L + N L G F
Sbjct: 366 GNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF 425
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 426 TSLRAIQTLHL 436
Score = 123 (48.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 35/125 (28%), Positives = 61/125 (48%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ L+ L+ + L +N++ + +F ++EL + N ++ G F
Sbjct: 550 NEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMF 609
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ I +++F GL +R L L DN + +I L L L +
Sbjct: 610 RGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLL 669
Query: 244 QNGFS 248
N F+
Sbjct: 670 ANPFN 674
Score = 116 (45.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L G + L +DL ++++S+++F +S L +L+L+ N LQ
Sbjct: 763 VTELYLDGNQFT-LVPGQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L L L + N S L+ G F ++ L L I GA+ L
Sbjct: 822 CIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAI-GANPL 868
Score = 108 (43.1 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP + + +RL L+ N I + L L+ + L + G F+ ++L
Sbjct: 52 LQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKEL 111
Query: 95 VELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L+LN N+ P+ + + + R+++ +N + + + F G T L+ L LD N++
Sbjct: 112 ERLRLNRNQLQVLPELLFQNNQALSRLDL-SENFLQAVPRKAFRGATDLKNLQLDKNRIS 170
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+ +F L L L + N TT+ +FN + +L L
Sbjct: 171 CIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Score = 104 (41.7 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ AL L L +N L++VP +F L L++ N + + +GAF
Sbjct: 118 RNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L +T I ++F + LR+ L N L
Sbjct: 178 RALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217
Score = 103 (41.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 41/182 (22%), Positives = 78/182 (42%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ LQ++P K + K + EL + N F+++ G YL+ ++++ +
Sbjct: 741 LDTVVRCSNKHLQALP-KGIPK--NVTELYLDGNQFTLVP-GQLSTFKYLQLVDLSN-NK 795
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA- 330
++ + +F + I A GL +L L+L N ++ E + A
Sbjct: 796 ISSLSNSSFTNMSQLTTLILSYNALQC-IPPLAFQGLRSLRLLSLHGNDVSTLQEGIFAD 854
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
L + I NP+ C C + WL + + C P ++ K L++ A+ C
Sbjct: 855 VTSLSHLAIGANPLYCDCRLRWLSSWVKTGYKEPGIARCAGPPEMEGKLLLTTPAKKFEC 914
Query: 389 AG 390
G
Sbjct: 915 QG 916
Score = 102 (41.0 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP++ ++ + L N IK++ A Y L+ +DLS+ I F+ L
Sbjct: 300 LTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSL 359
Query: 95 VELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L L NK P+ + + + + + + N+I+ I F+ L L +L L DN+++
Sbjct: 360 NSLVLYGNKITDLPRGVFGGLYTLQLL-LLNANKINCIRPDAFQDLQNLSLLSLYDNKIQ 418
Query: 153 SVPTPSFIYLGMLAELRVGLNVF 175
S+ +F L + L + N F
Sbjct: 419 SLAKGTFTSLRAIQTLHLAQNPF 441
Score = 101 (40.6 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 45/172 (26%), Positives = 70/172 (40%)
Query: 9 LRSKCMNPYE-PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIY 67
L S+C + P + L IP S L L+ N I ++ A ++
Sbjct: 503 LNSECTSDVACPHKCRCEASVVECSSLKLSKIPERIPQSTTELRLNNNEISILE-ATGLF 561
Query: 68 LSLQH---VDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFG 123
L H ++LS+ I G FE + EL L N+ + + + R +
Sbjct: 562 KKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLR 621
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
NRIS I F GL +R+L L DN + ++ +F L L+ L + N F
Sbjct: 622 NNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPF 673
Score = 71 (30.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 30/125 (24%), Positives = 52/125 (41%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
LQ+IP K + + T E LE+ N + + F GL L+ L++ + + V +GAF D
Sbjct: 52 LQAIP-KNIPRNT--ERLELNGNNITRIHKNDFAGLKQLRVLQLM-ENQIGAVERGAF-D 106
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAE 341
+ E L L+L EN + ++ +L+ + + +
Sbjct: 107 DMKELERLRLNRNQLQVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDK 166
Query: 342 NPIEC 346
N I C
Sbjct: 167 NRISC 171
Score = 57 (25.1 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 30 NLQEANLDVIPSHS---NPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPI 85
+L E L +P + ++ L L NRI ++ A L+ + L++ IP+
Sbjct: 139 DLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNNITTIPV 198
Query: 86 GGFEPQEKLVELQLNHNKH 104
F KL +L H+ H
Sbjct: 199 SSFNHMPKLRTFRL-HSNH 216
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 214 (80.4 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 98/376 (26%), Positives = 157/376 (41%)
Query: 116 PRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
PR VE N +++I +A F GL LR+L L +N++ S+ +F L L LR+ N
Sbjct: 47 PRNVERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIERGAFQDLQELERLRLNRN 106
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L + F G +L LDL + I AFRG + +++L L N++ I
Sbjct: 107 NLQVLPELLFLGTTKLFRLDLSENQIQGIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRA 166
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXX 293
L LE L + N S L F + L+ + + L +D
Sbjct: 167 LGDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLLCDCNVAWLSDWLRQRPRLGLY 226
Query: 294 XXXXXXIEEGALVGLPNLYHLNLKENAFT---SFSE-SMLAWPELRTIDIAENPIEC-GC 348
+ +L G N+ + KE T S S S+L PEL T + N ++C G
Sbjct: 227 TQC---MAPPSLRG-HNIAEVQKKEFMCTGPQSHSSCSVLQCPELCTC--SNNVVDCRGK 280
Query: 349 NIL--------WLREMLVRRNTSAVF-CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
+ + E+ + +N+ + + AP K I LS + T ++ +
Sbjct: 281 GLTEIPTNLPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQI-------TELASD 333
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
+F+GL L SLVL N++ +P L L+ L + N + L F+ L L L
Sbjct: 334 SFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLS 393
Query: 460 ITGASNLTRVRKGAFA 475
+ + L + KG F+
Sbjct: 394 LYD-NKLQTIAKGTFS 408
Score = 193 (73.0 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 91/400 (22%), Positives = 162/400 (40%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFS 248
+ +D G LT I D+ + + LR L +N + T KL +L ++ + N +
Sbjct: 498 TTVDCSGQKLTKIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINLSNNKIT 554
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+E G F+G S + L +T ++ L V + + G+ GL
Sbjct: 555 DIEEGTFEGASGVNELILT-SNRLEGVHY-SMLKGLGGLRTLMLRSNRISCVNNGSFTGL 612
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAV 365
++ L+L +N TS S L T+++ NP C C++ WL E L ++ T
Sbjct: 613 SSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCNCHLAWLGEWLRKKRIVTGNP 672
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR---GLSGLRSLVLTDNR-LQSIP 421
C SP LK + ++ +D C N R S L ++V N+ L+ +P
Sbjct: 673 RCQSPYFLKEIPIQDVAVQDFACEEGNDENSCSPLARCPAECSCLDTVVRCSNKGLKVLP 732
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN--LTRVRKGAFADXXX 479
K + + + EL + N F+ + LS K L + SN ++ + +F++
Sbjct: 733 -KGIPR--DVTELYLDGNEFTQVPLE----LSNYKHLTLIDLSNNQISTLSNHSFSNMSE 785
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTID---IAEN 536
I A GL +L L+L N + A+ +L ++ + N
Sbjct: 786 LLTLILSYNRLR-CIPAKAFDGLKSLRLLSLHGNDIAVIPDG--AFKDLSSLSHLALGAN 842
Query: 537 PIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLIS 574
P+ C C++ WL + + + C P + K L++
Sbjct: 843 PLYCDCHMQWLSDWVKSGYKEPGIARCTGPGDMTDKLLLT 882
Score = 180 (68.4 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 93/399 (23%), Positives = 157/399 (39%)
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
I AF LR + L++N++ + + L L L + N + L G F GL L
Sbjct: 306 IPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSL 365
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
+ L + A+ + +R +F D I +G L + L+L +N F
Sbjct: 366 QLL-LLNANKINCLRVDSFQDLQNLNLLSLYDNKLQT-IAKGTFSSLRAIQTLHLAQNPF 423
Query: 322 TSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRN---TSAVF-CNSPAPLKYK 376
+ L W L + +NPIE G R + +R S F C+ + K
Sbjct: 424 --MCDCHLKW--LADY-LQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGVEDYRSK 478
Query: 377 ----SLISLSAED--------LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TK 423
L+ + + C+G LT I D+ + + LR L +N + T
Sbjct: 479 LGGDCFADLACPEKCRCEGTTVDCSGQKLTKIPDHIPQYTAELR---LNNNEFTVLEATG 535
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
KL +L ++ + N + +E G F+G S + L +T ++ L V +
Sbjct: 536 IFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILT-SNRLEGVHY-SMLKGLGGLRT 593
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGC 542
+ + GL ++ L+L +N TS S L T+++ NP C C
Sbjct: 594 LMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLANPFNCNC 653
Query: 543 NILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
++ WL E L ++ T C SP LK + ++ +D
Sbjct: 654 HLAWLGEWLRKKRIVTGNPRCQSPYFLKEIPIQDVAVQD 692
Score = 176 (67.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 57/220 (25%), Positives = 94/220 (42%)
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
+AV C+ + I + E L LT I+ F GL LR L L +N++ SI
Sbjct: 30 TAVDCHGQSLRSVPRNIPRNVERLDLNANNLTKITKADFAGLKNLRVLQLMENKISSIER 89
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
L LE L + +N +L F G + L RL+++ + + + + AF
Sbjct: 90 GAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLS-ENQIQGIPRKAFRGSTEIKN 148
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECG 541
IE+ A L +L L L N + S S P+LRT + N + C
Sbjct: 149 LQLDYNQIS-CIEDGAFRALGDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLLCD 207
Query: 542 CNILWLREMLVRRNTSAVF--CNSPAPLKYKSLISLSAED 579
CN+ WL + L +R ++ C +P L+ ++ + ++
Sbjct: 208 CNVAWLSDWLRQRPRLGLYTQCMAPPSLRGHNIAEVQKKE 247
Score = 162 (62.1 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 42/116 (36%), Positives = 61/116 (52%)
Query: 166 AELRVGLNVFTTL-ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
AELR+ N FT L A G F L +L ++L +T+I + F G SG+ L+LT NRL+
Sbjct: 519 AELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLE 578
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+ L L L L + N S + G F GLS ++ L + + +T + GAF
Sbjct: 579 GVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYD-NLITSMSPGAF 633
Score = 137 (53.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 49/149 (32%), Positives = 71/149 (47%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I I F LR + L +NQ+ + + SF L L L + N T L G F
Sbjct: 300 QNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLF 359
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+GL L L L + + ++F+ L L L L DN+LQ+I S L ++ L +
Sbjct: 360 DGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLA 419
Query: 244 QNGFSMLEAGCFKGLS-YLKR--LEITGA 269
QN F M + K L+ YL+ +E +GA
Sbjct: 420 QNPF-MCDCH-LKWLADYLQDNPIETSGA 446
Score = 133 (51.9 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 46/184 (25%), Positives = 85/184 (46%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSH 77
PS+ S + + +L +P + +++RL L+ N + + A L +L+ + L
Sbjct: 22 PSQCSCSGTAVDCHGQSLRSVPRNIPRNVERLDLNANNLTKITKADFAGLKNLRVLQLME 81
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I G F+ ++L L+LN N + P+ + R+++ +N+I I + F
Sbjct: 82 NKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDL-SENQIQGIPRKAF 140
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
G T ++ L LD NQ+ + +F LG L L + N + L+ +FN + +L L
Sbjct: 141 RGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLSVASFNHMPKLRTFRLH 200
Query: 196 GAGL 199
L
Sbjct: 201 SNNL 204
Score = 130 (50.8 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 35/131 (26%), Positives = 59/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
E +T +R L+ N ++ +P +F L + + N T LA +F GL L++L L
Sbjct: 291 ETITEIR---LEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLY 347
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T + F GL L+ L+L N++ + L L L + N + G F
Sbjct: 348 GNKITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTF 407
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 408 SSLRAIQTLHL 418
Score = 121 (47.7 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 35/108 (32%), Positives = 57/108 (52%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT + N L+ +DL ++ +S+++F +S L +L+L+ NRL+
Sbjct: 739 VTELYLDGNEFTQVPLELSN-YKHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLR 797
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP K L L L + N +++ G FK LS L L + GA+ L
Sbjct: 798 CIPAKAFDGLKSLRLLSLHGNDIAVIPDGAFKDLSSLSHLAL-GANPL 844
Score = 116 (45.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 96 ELQLNHNKHFPQQ---IVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
EL+LN+N+ + I + R++ + N+I+ I++ FEG + + L L N+L
Sbjct: 520 ELRLNNNEFTVLEATGIFKKLPQLRKINL-SNNKITDIEEGTFEGASGVNELILTSNRLE 578
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
V LG L L + N + + +G+F GL + L L +T++S AF L
Sbjct: 579 GVHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHS 638
Query: 213 LRSLVLTDN 221
L +L L N
Sbjct: 639 LSTLNLLAN 647
Score = 114 (45.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 144 LYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L++N+ + T F L L ++ + N T + +G F G ++ L L L +
Sbjct: 521 LRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEGV 580
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ +GL GLR+L+L NR+ + + L+ + L + N + + G F L L
Sbjct: 581 HYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLS 640
Query: 263 RLEI 266
L +
Sbjct: 641 TLNL 644
Score = 104 (41.7 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 41/173 (23%), Positives = 75/173 (43%)
Query: 6 GQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AI 64
G + S C P + + + + L IP++ +I + L N IK + + A
Sbjct: 252 GPQSHSSCSVLQCPELCTCSNNVVDCRGKGLTEIPTNLPETITEIRLEQNSIKIIPAGAF 311
Query: 65 PIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIF 122
Y L+ +DLS+ + F+ L L L NK P+ + + S + + +
Sbjct: 312 APYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKITELPKGLFDGLFSLQLL-LL 370
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
N+I+ + F+ L L +L L DN+L+++ +F L + L + N F
Sbjct: 371 NANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQTLHLAQNPF 423
Score = 84 (34.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 44/164 (26%), Positives = 72/164 (43%)
Query: 308 LPN-LYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE--CGCNILWLREMLVRRNTS 363
LP + + L++N+ A + LR ID++ N I + LR + N+
Sbjct: 289 LPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSL----NSL 344
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTN-ISDNAFRGLSGLRSLVLTDNRLQSIPT 422
++ N L L + L A N + ++F+ L L L L DN+LQ+I
Sbjct: 345 VLYGNKITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAK 404
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLS-YLKR--LEITGA 463
S L ++ L + QN F M + K L+ YL+ +E +GA
Sbjct: 405 GTFSSLRAIQTLHLAQNPF-MCDCH-LKWLADYLQDNPIETSGA 446
Score = 72 (30.4 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 304 ALVGLPNLYHLNLKENAFTSFSESMLAWPELRTID---IAENPIECGCNILWLREMLVR- 359
A GL +L L+L N + A+ +L ++ + NP+ C C++ WL + +
Sbjct: 803 AFDGLKSLRLLSLHGNDIAVIPDG--AFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSG 860
Query: 360 -RNTSAVFCNSPAPLKYKSLISLSAEDLGCAG 390
+ C P + K L++ ++ C G
Sbjct: 861 YKEPGIARCTGPGDMTDKLLLTTPSKKFTCTG 892
>UNIPROTKB|Q1KS52 [details] [associations]
symbol:ALS "Acid-labile subunit" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816
HOGENOM:HOG000116109 OMA:FCGLGEL EMBL:CU929968 EMBL:DQ459343
EMBL:DQ459344 RefSeq:NP_001041651.1 UniGene:Ssc.16015 STRING:Q1KS52
Ensembl:ENSSSCT00000008781 GeneID:397322 KEGG:ssc:397322
Uniprot:Q1KS52
Length = 606
Score = 265 (98.3 bits), Expect = 8.5e-20, P = 8.5e-20
Identities = 87/318 (27%), Positives = 147/318 (46%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P +Q+L L N + V + + +L+ +DLSH + F L L+L HN
Sbjct: 242 PKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNA 301
Query: 104 --HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ + +++ G NR+ ++ + FEGL L +L L+DNQ++ + +F+
Sbjct: 302 LASLRPRTFKDLHFLEELQL-GHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLG 360
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L +A + + N L + F GLG+L +L L + L + + F GLSGLR L L DN
Sbjct: 361 LFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDN 420
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L++I + L L L EL++ N + L F+GL L+ L + + L+ + A
Sbjct: 421 GLEAIDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYL-LLSRNRLSALPADALG 479
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 341
+ E L L L +L+L+ N+ +F L L + +
Sbjct: 480 PLQRTFWLDVSHNRLQA-LPEAVLAPLGQLRYLSLRNNSLRTFVPQPLG---LERLWLEG 535
Query: 342 NPIECGCNILWLREMLVR 359
NP +CGC + LR + ++
Sbjct: 536 NPWDCGCPLRALRALALQ 553
Score = 255 (94.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 110/434 (25%), Positives = 177/434 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + F L L L +N L V F L L +L +G N L D AF
Sbjct: 131 RNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAF 190
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+GL L L L G LT + F GL LR L L+ N L+S+ KL +L++L +
Sbjct: 191 HGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLD 250
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
N + + G F G+ L+ L+++ + + + + F +
Sbjct: 251 HNLLAAVAPGAFLGMKALRWLDLSH-NRVGGLLEDTFPGLLGLHVLRLAHNALAS-LRPR 308
Query: 304 ALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIE---CGCNILWLREMLVR 359
L L L L N E +L + + +N I+ G L L + V
Sbjct: 309 TFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGA-FLGLFNVAVM 367
Query: 360 RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
+ N P + ++ L L + L + G + + F GLSGLR L L DN L++
Sbjct: 368 NLSGNCLRNLPEQV-FRGLGKLHSLHLEHSCLGRVGL--HTFAGLSGLRRLFLKDNGLEA 424
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 479
I + L L L EL++ N + L F+GL L+ L + + L+ + A
Sbjct: 425 IDEQSLWGLAELLELDLTANRLTHLPGRLFQGLGKLEYL-LLSRNRLSALPADALGPLQR 483
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIE 539
+ E L L L +L+L+ N+ +F L L + + NP +
Sbjct: 484 TFWLDVSHNRLQAL-PEAVLAPLGQLRYLSLRNNSLRTFVPQPLG---LERLWLEGNPWD 539
Query: 540 CGCNILWLREMLVR 553
CGC + LR + ++
Sbjct: 540 CGCPLRALRALALQ 553
Score = 247 (92.0 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 104/383 (27%), Positives = 152/383 (39%)
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
A R L+LD N SVP +F L L L + + +L A GL L L L L
Sbjct: 75 AARALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQL 134
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
+++ + F GL SL L +N L + LT L +L +G N ++L F GL+
Sbjct: 135 RSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLA 194
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L+ L + G + LT ++ F ++ V LP L L L N
Sbjct: 195 NLRELVLAG-NKLTYLQPALFCGLGELRELDLSRNALRS-VKANVFVKLPKLQKLYLDHN 252
Query: 320 AFTSFSE-SMLAWPELRTIDIAENPI-----ECGCNILWLREMLVRRNTSAVFCNSPAPL 373
+ + + L LR +D++ N + + +L L + + N A S P
Sbjct: 253 LLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNALA----SLRPR 308
Query: 374 KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 433
+K L L E+L L + + AF GL L L L DN++Q I L +
Sbjct: 309 TFKDLHFL--EELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAV 366
Query: 434 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXI 493
+ + N L F+GL L L + S L RV FA I
Sbjct: 367 MNLSGNCLRNLPEQVFRGLGKLHSLHLEH-SCLGRVGLHTFAGLSGLRRLFLKDNGLEAI 425
Query: 494 IEEDALVGLPNLYHLNLKENAFT 516
+E +L GL L L+L N T
Sbjct: 426 -DEQSLWGLAELLELDLTANRLT 447
Score = 243 (90.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 109/419 (26%), Positives = 181/419 (43%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPI 85
NLQ + L + + +Q L L N+++++ + ++ L + L + +
Sbjct: 104 NLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEE 163
Query: 86 GGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G F+ L +L L N P + + R + + G N+++ + A F GL LR
Sbjct: 164 GLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAG-NKLTYLQPALFCGLGELRE 222
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N LRSV F+ L L +L + N+ +A GAF G+ L LDL + +
Sbjct: 223 LDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLL 282
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL GL L L N L S+ + L LEEL++G N L F+GL L+
Sbjct: 283 EDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEV 342
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
L + + + ++ GAF + E GL L+ L+L+ +
Sbjct: 343 LALND-NQIQEIKAGAFLGLFNVAVMNLSGNCLRN-LPEQVFRGLGKLHSLHLEHSCLGR 400
Query: 324 FS-ESMLAWPELRTIDIAENPIEC-GCNILW-LREMLVRRNTSAVFCNSPAPLKYKSLIS 380
+ LR + + +N +E LW L E+L T+ + P L ++ L
Sbjct: 401 VGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRL-FQGLGK 459
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L E L + L+ + +A L L ++ NRLQ++P L+ L +L L + N
Sbjct: 460 L--EYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPLGQLRYLSLRNN 516
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 99/453 (21%), Positives = 168/453 (37%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N S + F L++L L L + L S+ + + L L L + N +LA F
Sbjct: 84 NNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHTFL 143
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L++L L L+ + + F+GL+ L L L N L +P L L EL +
Sbjct: 144 HTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAG 203
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + L+ F GL L+ L+++ + L V+ F + GA
Sbjct: 204 NKLTYLQPALFCGLGELRELDLS-RNALRSVKANVFVKLPKLQKLYLDHNLLAA-VAPGA 261
Query: 305 LVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTS 363
+G+ L L+L N E L + +A N + +++
Sbjct: 262 FLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHNAL-ASLRPRTFKDLHFLEELQ 320
Query: 364 AVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
N L K+ L E L + I AF GL + + L+ N L+++P
Sbjct: 321 LGH-NRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPE 379
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
+ L +L L + + + F GLS L+RL + + L + + +
Sbjct: 380 QVFRGLGKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKD-NGLEAIDEQSLWGLAELLE 438
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRT--IDIAENPIEC 540
+ GL L +L L N ++ L P RT +D++ N ++
Sbjct: 439 LDLTANRLTHLPGR-LFQGLGKLEYLLLSRNRLSALPADALG-PLQRTFWLDVSHNRLQA 496
Query: 541 GCNILW-----LREMLVRRNTSAVFCNSPAPLK 568
+ LR + +R N+ F P L+
Sbjct: 497 LPEAVLAPLGQLRYLSLRNNSLRTFVPQPLGLE 529
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 263 (97.6 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 97/421 (23%), Positives = 178/421 (42%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L ++ I AF+ L L L L N+LQ +P
Sbjct: 71 NNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
+L L++ +N + F+G++ +K L++ ++++ + GAF
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDN-NHISCIEDGAFR-ALRDLEILTL 188
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-----PELRTID---IAENPI 344
I + +P + L L N + + LAW + RT+ + P+
Sbjct: 189 NNNNISRILVTSFNHMPKIRTLRLHSNHL--YCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 345 EC-GCNILWLRE---MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
G N+ +++ + ++ CN+ + + S + S + C G GL I N
Sbjct: 247 HLRGFNVADVQKKEYVCPAPHSEPPSCNANS-ISCPSPCTCSNNIVDCRGKGLMEIPANL 305
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
G+ +R L N +++IP ++ +L+ ++I +N S + F+GL L L +
Sbjct: 306 PEGIVEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVL 362
Query: 461 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE 520
G + +T + KG F D + + L NL L+L +N + S+
Sbjct: 363 YG-NKITEIVKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK 420
Query: 521 SMLA-WPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSLISLSA 577
+ A ++T+ +A+NP C C++ WL + L TS C+SP L K + + +
Sbjct: 421 GLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKS 480
Query: 578 E 578
+
Sbjct: 481 K 481
Score = 195 (73.7 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 73/291 (25%), Positives = 123/291 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL +T I+ F GL LR L L DN++ I L +LE L + +N +L
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L RL+++ + + + + AF IE+GA L +L
Sbjct: 126 ELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGITDVKNLQLDNNHISC-IEDGAFRALRDL 183
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N + S P++RT+ + N + C C++ WL + L +R T F C
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCM 243
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
+P L+ ++ + ++ C S NA +S S N + K L ++
Sbjct: 244 APVHLRGFNVADVQKKEYVCPAPHSEPPSCNA-NSIS-CPSPCTCSNNIVDCRGKGLMEI 301
Query: 429 TR-----LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ E+ + QN + AG F LKR++I+ + ++ + AF
Sbjct: 302 PANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDIS-KNQISDIAPDAF 351
Score = 193 (73.0 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 82/371 (22%), Positives = 147/371 (39%)
Query: 216 LVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L DN + + T KL L ++ + N + G F G + ++ L +TG + L
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTG-NQLET 595
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPE 333
V F + GL ++ L+L +N T+ + +
Sbjct: 596 VHGRVFRGLSGLKTLMLRSNLIGC-VSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAG- 390
L TI++ NP C C++ WL + L +R + C P LK + ++ +D C G
Sbjct: 655 LSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Query: 391 -AGLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
+S + + ++V N+ L+++P +T EL + N + +
Sbjct: 715 EESSCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMPKDVT---ELYLEGNHLTAVP--- 768
Query: 449 FKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
+ LS L+ L + SN ++ + F++ I A GL +L
Sbjct: 769 -RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR-CIPVHAFNGLRSLR 826
Query: 507 HLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNS 563
L L N +S E S L + + NP+ C C++ WL E + + C+S
Sbjct: 827 VLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSS 886
Query: 564 PAPLKYKSLIS 574
P P+ + L++
Sbjct: 887 PEPMADRLLLT 897
Score = 170 (64.9 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 46/153 (30%), Positives = 73/153 (47%)
Query: 116 PRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
PR E +N I+RI + F GL LR+L+L+DNQ+ + +F L L LR+ N
Sbjct: 60 PRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKN 119
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L + F +L+ LDL + I AFRG++ +++L L +N + I
Sbjct: 120 KLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRA 179
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L LE L + N S + F + ++ L +
Sbjct: 180 LRDLEILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 166 (63.5 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 90/398 (22%), Positives = 150/398 (37%)
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
I AF L+ + ++ N++ I L L L + N + + G F GL L
Sbjct: 322 IPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSL 381
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
+ L + A+ + +R F D I +G L ++ L+L +N F
Sbjct: 382 QLL-LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGLFAPLQSIQTLHLAQNPF 439
Query: 322 TSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNT---SAVF-CNSPAPLKYK 376
+ L W L + +NPIE G R + +R + S F C+ Y+
Sbjct: 440 VC--DCHLKW--LADY-LQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSED--YR 492
Query: 377 SLIS-------LSAEDLGCAGAGLTNISDNAFRGLSGLRSLV----LTDNRLQSIP-TKQ 424
S S + E C G + + R S L V L DN + + T
Sbjct: 493 SRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGI 552
Query: 425 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 484
KL L ++ + N + G F G + ++ L +TG + L V F
Sbjct: 553 FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTG-NQLETVHGRVFRGLSGLKTLM 611
Query: 485 XXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCN 543
+ D GL ++ L+L +N T+ + + L TI++ NP C C+
Sbjct: 612 LRSNLIG-CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 670
Query: 544 ILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
+ WL + L +R + C P LK + ++ +D
Sbjct: 671 LAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Score = 157 (60.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 52/193 (26%), Positives = 83/193 (43%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I +AE L +T I+ F GL LR L L DN++ I L +LE L + +
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N +L F+ L RL+++ + + + + AF IE+ A
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGITDVKNLQLDNNHIS-CIEDGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L +L L L N + S P++RT+ + N + C C++ WL + L +R T
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTV 236
Query: 558 AVF--CNSPAPLK 568
F C +P L+
Sbjct: 237 GQFTLCMAPVHLR 249
Score = 137 (53.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
EG+ +R L+ N ++++P +F L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T I F GL L+ L+L N++ + L L L + N + G F
Sbjct: 364 GNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 424 APLQSIQTLHL 434
Score = 130 (50.8 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 40/130 (30%), Positives = 58/130 (44%)
Query: 119 VEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
VEI QN I I F L+ + + NQ+ + +F L L L + N T
Sbjct: 310 VEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ G F+GL L L L + + N F+ L L L L DN+LQ+I + L +
Sbjct: 370 IVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSI 429
Query: 238 EELEIGQNGF 247
+ L + QN F
Sbjct: 430 QTLHLAQNPF 439
Score = 129 (50.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 42/174 (24%), Positives = 76/174 (43%)
Query: 100 NHNKHFPQQIVCSIISPRRVEIFG------QNRISRIDQACFEGLTALRILYLDDNQLRS 153
++ F + ++ P + G ++ RI E +T LR L+DN++
Sbjct: 490 DYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLR---LNDNEVSV 546
Query: 154 VP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
+ T F L L ++ + N + +GAF+G + L L G L + FRGLSG
Sbjct: 547 LEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSG 606
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L++L+L N + + + L+ + L + N + + G F L L + +
Sbjct: 607 LKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINL 660
Score = 126 (49.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N +S ++ F+ L LR + L +N+++ V +F + EL + N T+ F
Sbjct: 542 NEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVF 601
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR + +S++ F GLS +R L L DNR+ +I + L L + +
Sbjct: 602 RGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLL 661
Query: 244 QNGFS 248
N F+
Sbjct: 662 SNPFN 666
Score = 120 (47.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
RV N++S I++ F+ L L L L+ N+L+ +P F L L + N
Sbjct: 88 RVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQG 147
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ AF G+ + L L ++ I D AFR L L L L +N + I + + ++
Sbjct: 148 IPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKI 207
Query: 238 EELEIGQN 245
L + N
Sbjct: 208 RTLRLHSN 215
Score = 117 (46.2 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 45/181 (24%), Positives = 85/181 (46%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTN---RIKTVDSAIPIYLSLQHVDL 75
P++ + S + L +P + +RL L N RI +D A L + H++
Sbjct: 35 PTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLED 94
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQA 133
+ + +I G F+ ++L L+LN NK P+ + S R+++ +N+I I +
Sbjct: 95 NQVS--VIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDL-SENQIQGIPRK 151
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F G+T ++ L LD+N + + +F L L L + N + + +FN + ++ L
Sbjct: 152 AFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLR 211
Query: 194 L 194
L
Sbjct: 212 L 212
Score = 104 (41.7 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ L L L +NQ++ +P +F + + L++ N + + DGAF
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L ++ I +F + +R+L L N L
Sbjct: 178 RALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 99 (39.9 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 41/170 (24%), Positives = 74/170 (43%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIG 86
PSCN AN PS S + + + + +P + + L + IP G
Sbjct: 271 PSCN---ANSISCPSPCTCSNNIVDCRGKGLMEIPANLPE--GIVEIRLEQNSIKAIPAG 325
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F +KL + ++ N+ + S + ++G N+I+ I + F+GL +L++L
Sbjct: 326 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYG-NKITEIVKGLFDGLVSLQLL 384
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
L+ N++ + +F L L L + N T++ G F L + L L
Sbjct: 385 LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHL 434
Score = 93 (37.8 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 41/177 (23%), Positives = 76/177 (42%)
Query: 4 DAGQELRSKC-MNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS 62
D S+C M+ P + + L IPSH + L L+ N + ++
Sbjct: 490 DYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLE- 548
Query: 63 AIPIYL---SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
A I+ +L+ ++LS+ + G F+ + EL L N+ V +S +
Sbjct: 549 ATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLK 608
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ N I + F GL+++R+L L DN++ ++ +F L L+ + + N F
Sbjct: 609 TLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPF 665
Score = 91 (37.1 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 27/96 (28%), Positives = 41/96 (42%)
Query: 304 ALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--R 360
A GL +L L L N +S E S L + + NP+ C C++ WL E + +
Sbjct: 818 AFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYK 877
Query: 361 NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
C+SP P+ + L++ C G NI
Sbjct: 878 EPGIARCSSPEPMADRLLLTTPTHRFQCKGPVDINI 913
Score = 78 (32.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 189 LSALDLRGAGLTNISDNAFRGLSGLRSLVLTD---NRLQSIPTKQLSKLTRLEELEIGQN 245
++ L L G LT + R LS LR L L D N + + S ++ L L + N
Sbjct: 754 VTELYLEGNHLTAVP----RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYN 809
Query: 246 GFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
+ F GL L+ L + G ++++ V +G+F D
Sbjct: 810 RLRCIPVHAFNGLRSLRVLTLHG-NDISSVPEGSFND 845
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 263 (97.6 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 97/421 (23%), Positives = 178/421 (42%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L ++ I AF+ L L L L N+LQ +P
Sbjct: 71 NNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQ 130
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
+L L++ +N + F+G++ +K L++ ++++ + GAF
Sbjct: 131 STPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDN-NHISCIEDGAFR-ALRDLEILTL 188
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-----PELRTID---IAENPI 344
I + +P + L L N + + LAW + RT+ + P+
Sbjct: 189 NNNNISRILVTSFNHMPKIRTLRLHSNHL--YCDCHLAWLSDWLRQRRTVGQFTLCMAPV 246
Query: 345 EC-GCNILWLRE---MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
G N+ +++ + ++ CN+ + + S + S + C G GL I N
Sbjct: 247 HLRGFNVADVQKKEYVCPAPHSEPPSCNANS-ISCPSPCTCSNNIVDCRGKGLMEIPANL 305
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
G+ +R L N +++IP ++ +L+ ++I +N S + F+GL L L +
Sbjct: 306 PEGIVEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVL 362
Query: 461 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE 520
G + +T + KG F D + + L NL L+L +N + S+
Sbjct: 363 YG-NKITEIVKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK 420
Query: 521 SMLA-WPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSLISLSA 577
+ A ++T+ +A+NP C C++ WL + L TS C+SP L K + + +
Sbjct: 421 GLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKS 480
Query: 578 E 578
+
Sbjct: 481 K 481
Score = 195 (73.7 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 73/291 (25%), Positives = 123/291 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL +T I+ F GL LR L L DN++ I L +LE L + +N +L
Sbjct: 66 LDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L RL+++ + + + + AF IE+GA L +L
Sbjct: 126 ELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGITDVKNLQLDNNHISC-IEDGAFRALRDL 183
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N + S P++RT+ + N + C C++ WL + L +R T F C
Sbjct: 184 EILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCM 243
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
+P L+ ++ + ++ C S NA +S S N + K L ++
Sbjct: 244 APVHLRGFNVADVQKKEYVCPAPHSEPPSCNA-NSIS-CPSPCTCSNNIVDCRGKGLMEI 301
Query: 429 TR-----LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ E+ + QN + AG F LKR++I+ + ++ + AF
Sbjct: 302 PANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDIS-KNQISDIAPDAF 351
Score = 193 (73.0 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 82/371 (22%), Positives = 147/371 (39%)
Query: 216 LVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L DN + + T KL L ++ + N + G F G + ++ L +TG + L
Sbjct: 537 LRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTG-NQLET 595
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPE 333
V F + GL ++ L+L +N T+ + +
Sbjct: 596 VHGRVFRGLSGLKTLMLRSNLIGC-VSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVS 654
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAG- 390
L TI++ NP C C++ WL + L +R + C P LK + ++ +D C G
Sbjct: 655 LSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGN 714
Query: 391 -AGLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
+S + + ++V N+ L+++P +T EL + N + +
Sbjct: 715 EESSCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMPKDVT---ELYLEGNHLTAVP--- 768
Query: 449 FKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
+ LS L+ L + SN ++ + F++ I A GL +L
Sbjct: 769 -RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLR-CIPVHAFNGLRSLR 826
Query: 507 HLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNS 563
L L N +S E S L + + NP+ C C++ WL E + + C+S
Sbjct: 827 VLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSS 886
Query: 564 PAPLKYKSLIS 574
P P+ + L++
Sbjct: 887 PEPMADRLLLT 897
Score = 170 (64.9 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 46/153 (30%), Positives = 73/153 (47%)
Query: 116 PRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
PR E +N I+RI + F GL LR+L+L+DNQ+ + +F L L LR+ N
Sbjct: 60 PRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKN 119
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L + F +L+ LDL + I AFRG++ +++L L +N + I
Sbjct: 120 KLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRA 179
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L LE L + N S + F + ++ L +
Sbjct: 180 LRDLEILTLNNNNISRILVTSFNHMPKIRTLRL 212
Score = 166 (63.5 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 90/398 (22%), Positives = 150/398 (37%)
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
I AF L+ + ++ N++ I L L L + N + + G F GL L
Sbjct: 322 IPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSL 381
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
+ L + A+ + +R F D I +G L ++ L+L +N F
Sbjct: 382 QLL-LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT-ISKGLFAPLQSIQTLHLAQNPF 439
Query: 322 TSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNT---SAVF-CNSPAPLKYK 376
+ L W L + +NPIE G R + +R + S F C+ Y+
Sbjct: 440 VC--DCHLKW--LADY-LQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSED--YR 492
Query: 377 SLIS-------LSAEDLGCAGAGLTNISDNAFRGLSGLRSLV----LTDNRLQSIP-TKQ 424
S S + E C G + + R S L V L DN + + T
Sbjct: 493 SRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGI 552
Query: 425 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 484
KL L ++ + N + G F G + ++ L +TG + L V F
Sbjct: 553 FKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTG-NQLETVHGRVFRGLSGLKTLM 611
Query: 485 XXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCN 543
+ D GL ++ L+L +N T+ + + L TI++ NP C C+
Sbjct: 612 LRSNLIG-CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNCH 670
Query: 544 ILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
+ WL + L +R + C P LK + ++ +D
Sbjct: 671 LAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 708
Score = 157 (60.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 52/193 (26%), Positives = 83/193 (43%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I +AE L +T I+ F GL LR L L DN++ I L +LE L + +
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNK 118
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N +L F+ L RL+++ + + + + AF IE+ A
Sbjct: 119 NKLQVLPELLFQSTPKLTRLDLS-ENQIQGIPRKAFRGITDVKNLQLDNNHIS-CIEDGA 176
Query: 499 LVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
L +L L L N + S P++RT+ + N + C C++ WL + L +R T
Sbjct: 177 FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTV 236
Query: 558 AVF--CNSPAPLK 568
F C +P L+
Sbjct: 237 GQFTLCMAPVHLR 249
Score = 137 (53.3 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
EG+ +R L+ N ++++P +F L + + N + +A AF GL L++L L
Sbjct: 307 EGIVEIR---LEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 363
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T I F GL L+ L+L N++ + L L L + N + G F
Sbjct: 364 GNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 424 APLQSIQTLHL 434
Score = 130 (50.8 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 40/130 (30%), Positives = 58/130 (44%)
Query: 119 VEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
VEI QN I I F L+ + + NQ+ + +F L L L + N T
Sbjct: 310 VEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 369
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ G F+GL L L L + + N F+ L L L L DN+LQ+I + L +
Sbjct: 370 IVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSI 429
Query: 238 EELEIGQNGF 247
+ L + QN F
Sbjct: 430 QTLHLAQNPF 439
Score = 129 (50.5 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 42/174 (24%), Positives = 76/174 (43%)
Query: 100 NHNKHFPQQIVCSIISPRRVEIFG------QNRISRIDQACFEGLTALRILYLDDNQLRS 153
++ F + ++ P + G ++ RI E +T LR L+DN++
Sbjct: 490 DYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLR---LNDNEVSV 546
Query: 154 VP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
+ T F L L ++ + N + +GAF+G + L L G L + FRGLSG
Sbjct: 547 LEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSG 606
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L++L+L N + + + L+ + L + N + + G F L L + +
Sbjct: 607 LKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINL 660
Score = 126 (49.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N +S ++ F+ L LR + L +N+++ V +F + EL + N T+ F
Sbjct: 542 NEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVF 601
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR + +S++ F GLS +R L L DNR+ +I + L L + +
Sbjct: 602 RGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLL 661
Query: 244 QNGFS 248
N F+
Sbjct: 662 SNPFN 666
Score = 120 (47.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
RV N++S I++ F+ L L L L+ N+L+ +P F L L + N
Sbjct: 88 RVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQG 147
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ AF G+ + L L ++ I D AFR L L L L +N + I + + ++
Sbjct: 148 IPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKI 207
Query: 238 EELEIGQN 245
L + N
Sbjct: 208 RTLRLHSN 215
Score = 117 (46.2 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 45/181 (24%), Positives = 85/181 (46%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTN---RIKTVDSAIPIYLSLQHVDL 75
P++ + S + L +P + +RL L N RI +D A L + H++
Sbjct: 35 PTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLED 94
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQA 133
+ + +I G F+ ++L L+LN NK P+ + S R+++ +N+I I +
Sbjct: 95 NQVS--VIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDL-SENQIQGIPRK 151
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F G+T ++ L LD+N + + +F L L L + N + + +FN + ++ L
Sbjct: 152 AFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPKIRTLR 211
Query: 194 L 194
L
Sbjct: 212 L 212
Score = 104 (41.7 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ L L L +NQ++ +P +F + + L++ N + + DGAF
Sbjct: 118 KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAF 177
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L ++ I +F + +R+L L N L
Sbjct: 178 RALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHL 217
Score = 99 (39.9 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 41/170 (24%), Positives = 74/170 (43%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIG 86
PSCN AN PS S + + + + +P + + L + IP G
Sbjct: 271 PSCN---ANSISCPSPCTCSNNIVDCRGKGLMEIPANLPE--GIVEIRLEQNSIKAIPAG 325
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F +KL + ++ N+ + S + ++G N+I+ I + F+GL +L++L
Sbjct: 326 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYG-NKITEIVKGLFDGLVSLQLL 384
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
L+ N++ + +F L L L + N T++ G F L + L L
Sbjct: 385 LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHL 434
Score = 93 (37.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 41/177 (23%), Positives = 76/177 (42%)
Query: 4 DAGQELRSKC-MNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS 62
D S+C M+ P + + L IPSH + L L+ N + ++
Sbjct: 490 DYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLE- 548
Query: 63 AIPIYL---SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
A I+ +L+ ++LS+ + G F+ + EL L N+ V +S +
Sbjct: 549 ATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLK 608
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ N I + F GL+++R+L L DN++ ++ +F L L+ + + N F
Sbjct: 609 TLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPF 665
Score = 85 (35.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 24/88 (27%), Positives = 38/88 (43%)
Query: 304 ALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--R 360
A GL +L L L N +S E S L + + NP+ C C++ WL E + +
Sbjct: 818 AFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYK 877
Query: 361 NTSAVFCNSPAPLKYKSLISLSAEDLGC 388
C+SP P+ + L++ C
Sbjct: 878 EPGIARCSSPEPMADRLLLTTPTHRFQC 905
Score = 78 (32.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 189 LSALDLRGAGLTNISDNAFRGLSGLRSLVLTD---NRLQSIPTKQLSKLTRLEELEIGQN 245
++ L L G LT + R LS LR L L D N + + S ++ L L + N
Sbjct: 754 VTELYLEGNHLTAVP----RELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYN 809
Query: 246 GFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
+ F GL L+ L + G ++++ V +G+F D
Sbjct: 810 RLRCIPVHAFNGLRSLRVLTLHG-NDISSVPEGSFND 845
>UNIPROTKB|F1MJZ4 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 EMBL:DAAA02057304
IPI:IPI00807324 Ensembl:ENSBTAT00000047326 OMA:FCGLGEL
Uniprot:F1MJZ4
Length = 610
Score = 262 (97.3 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 88/322 (27%), Positives = 143/322 (44%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN- 102
P +Q+L L N + V + + +L+ +DLSH + F L L+L+HN
Sbjct: 246 PKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHNV 305
Query: 103 -KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ + +++ G NR+ ++ + F GL L +L L+DNQL+ + F+
Sbjct: 306 LAGLRPRTFKDLHFLEELQL-GHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLG 364
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L LA L + N L + AF GL +L +L L G L + AF GLSGLR L L N
Sbjct: 365 LRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGN 424
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
+ + + L L L EL++ N + L F+ L L+ L + + L+ + A
Sbjct: 425 SIADVDERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYL-LLARNRLSALPADALG 483
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 341
+ AL L L L+L+ N+ +F+ P L + +
Sbjct: 484 PLQRTFWLDVSHNRLEA-LPAAALAPLSRLRFLSLRNNSLRTFAPQP---PGLERLWLEG 539
Query: 342 NPIECGCNILWLREMLVRRNTS 363
NP +CGC + LR +++ S
Sbjct: 540 NPWDCGCALGALRAFALQQPAS 561
Score = 252 (93.8 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 110/437 (25%), Positives = 175/437 (40%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
NR+ + F L L L +N L + F L L +L +G N T L D AF
Sbjct: 136 NRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQ 195
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L G L + F GL LR L L+ N L+S+ KL +L++L +
Sbjct: 196 GLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDH 255
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + + G F G+ L+ L+++ + + + + +F +
Sbjct: 256 NLVAAVAPGAFLGMKALRWLDLSH-NRVGSLLEDSFPGLLGLHVLRLSHNVLAG-LRPRT 313
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIE---CGCNILWLREMLVRR 360
L L L L N E A +L + + +N ++ G L LR + V
Sbjct: 314 FKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPG-GFLGLRNLAVLN 372
Query: 361 NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
+S + P ++ L L + L G L + AF GLSGLR L L N + +
Sbjct: 373 LSSNCLRDLPERA-FQGLAKLHS--LHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADV 429
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 480
+ L L L EL++ N + L F+ L L+ L + + L+ + A
Sbjct: 430 DERSLGGLAELLELDLTANQLTHLPGRLFQDLGRLEYL-LLARNRLSALPADALGPLQRT 488
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC 540
+ AL L L L+L+ N+ +F+ P L + + NP +C
Sbjct: 489 FWLDVSHNRLEAL-PAAALAPLSRLRFLSLRNNSLRTFAPQP---PGLERLWLEGNPWDC 544
Query: 541 GCNILWLREMLVRRNTS 557
GC + LR +++ S
Sbjct: 545 GCALGALRAFALQQPAS 561
Score = 249 (92.7 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 117/476 (24%), Positives = 190/476 (39%)
Query: 86 GGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
GG P + + L N+ P ++ + + G S QA GL L L+
Sbjct: 74 GGLPPGTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQALL-GLRGLCHLH 132
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L+ N+L ++ +F++ LA L + N+ + L +G F GL L L+L LT + D
Sbjct: 133 LEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDT 192
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
AF+GL+GLR LVL N+L + L L EL++ +N ++A F L L++L
Sbjct: 193 AFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKANVFVKLPKLQKLY 252
Query: 266 ITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF 324
+ NL V GAF +E+ + GL L+ L L N
Sbjct: 253 LD--HNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLED-SFPGLLGLHVLRLSHNVLAGL 309
Query: 325 S-ESMLAWPELRTIDIAEN-----PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSL 378
+ L + + N P E + L + + N P + L
Sbjct: 310 RPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQ----LQELRPGGFLGL 365
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
+L+ L + L ++ + AF+GL+ L SL L L + + L+ L L +
Sbjct: 366 RNLAV--LNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKG 423
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N + ++ GL+ L L++T A+ LT + F D + DA
Sbjct: 424 NSIADVDERSLGGLAELLELDLT-ANQLTHLPGRLFQDLGRLEYLLLARNRLSAL-PADA 481
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIEC------GCNILWL 547
L L + L++ N + + LA LR + + N + G LWL
Sbjct: 482 LGPLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSLRTFAPQPPGLERLWL 537
Score = 216 (81.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 99/378 (26%), Positives = 158/378 (41%)
Query: 30 NLQEANLDVIPS---HSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPI 85
NL +L V+P ++ LVL+ N++ + + L L+ +DLS T +
Sbjct: 180 NLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNTLRSVKA 239
Query: 86 GGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
F KL +L L+HN + + R +++ NR+ + + F GL L +
Sbjct: 240 NVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDL-SHNRVGSLLEDSFPGLLGLHV 298
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N L + +F L L EL++G N L + AF GLG+L L L L +
Sbjct: 299 LRLSHNVLAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELR 358
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
F GL L L L+ N L+ +P + L +L L + + L F GLS L+R
Sbjct: 359 PGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLEGGCLARLGPLAFAGLSGLRR 418
Query: 264 LEITGAS--NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
L + G S ++ G A+ + + L L +L L N
Sbjct: 419 LFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLFQD----LGRLEYLLLARNRL 474
Query: 322 TSFSESMLAWPELRT--IDIAENPIECG-----CNILWLREMLVRRNTSAVFCNSPAPLK 374
++ L P RT +D++ N +E + LR + +R N+ F P L+
Sbjct: 475 SALPADALG-PLQRTFWLDVSHNRLEALPAAALAPLSRLRFLSLRNNSLRTFAPQPPGLE 533
Query: 375 YKSLISLSAEDLGCA-GA 391
+ + + D GCA GA
Sbjct: 534 -RLWLEGNPWDCGCALGA 550
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 223 (83.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 70/291 (24%), Positives = 126/291 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+L G LT I+ N F GL LR L L +N++ ++ ++ LE L + +N L
Sbjct: 59 LELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLP 118
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ + L RL+++ + + + + AF IE+GA + L
Sbjct: 119 ELLFQKNAALSRLDLS-ENFIQAIPRKAFRGATDIKNLQLDKNHISC-IEDGAFRAMRGL 176
Query: 312 YHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N +S S P+LRT + N + C C + WL + L R +F C+
Sbjct: 177 EVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERPNIGLFTQCS 236
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI----PTKQ 424
SPAPL+ ++ + + C+G + + + ++ +N + PT
Sbjct: 237 SPAPLRGLNVAEVQKHEFSCSGQSDSAVGQSCSLSSGSCPAVCSCNNNIVDCRGKGPTLI 296
Query: 425 LSKLT-RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
S L + E+ + QN + G F L+R++++ + ++ + AF
Sbjct: 297 PSSLPDSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSN-NQISELAPDAF 346
Score = 217 (81.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 91/375 (24%), Positives = 152/375 (40%)
Query: 218 LTDNRLQSIPTKQLSK-LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 276
L +N + +I K LT L+++ + N S +E G F+G S + L +T A+ L
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLT-ANQLDLAH 598
Query: 277 KGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELR 335
G F I + GL N+ L+L +N T+ + L
Sbjct: 599 SGMFRGLEGLRMLMLRNNRISC-IHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLS 657
Query: 336 TIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGL 393
T+++ NP C C + WL L R T C+ PA LK L ++A D C
Sbjct: 658 TLNLLANPFNCNCRLAWLSSWLRNRKIVTGNPRCHRPAFLKEIPLQDVAAPDFRCEDDH- 716
Query: 394 TNISD----NAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
++S + + L S+V N+ LQ++P +T EL + N S +
Sbjct: 717 EDVSCAPPVHCPADCTCLESVVRCSNKHLQALPKGTPRNIT---ELYLDGNQLSTVP--- 770
Query: 449 FKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
K LS K L++ SN ++ + +F + I A GL +L
Sbjct: 771 -KELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALR-CIPTLAFSGLRSLR 828
Query: 507 HLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNS 563
L+L N + + + + + L + I NP+ C C + WL + + + C S
Sbjct: 829 LLSLHGNDISELPDGIFSDAQSLSHLAIGANPLHCDCGLRWLSDWVKTGYKEPGIARCAS 888
Query: 564 PAPLKYKSLISLSAE 578
P ++ K L++ A+
Sbjct: 889 PHGMEGKLLLTTPAK 903
Score = 201 (75.8 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 86/368 (23%), Positives = 151/368 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D RG G T I + ++ +R L N ++SIP S +L +++ N S L
Sbjct: 286 VDCRGKGPTLIPSSLPDSMTEIR---LEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELA 342
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+GL L L + G + +T + +G F D + L NL
Sbjct: 343 PDAFQGLRSLNSLVLYG-NKITDLPRGVF-DGLHALQLLLLNANKIHCLRANTFQDLQNL 400
Query: 312 YHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFC 367
L+L +N + ++ + ++T+ +A+NP C CN+ WL + L R N TS C
Sbjct: 401 SLLSLYDNKIQTLAKGTFSSLRAIQTLHLAQNPFICDCNLKWLADYL-RSNPIETSGARC 459
Query: 368 NSPAPLKYKSLISLSAEDLGCAG-----------AGLTNISDNAFRGLSGLR---SLVLT 413
SP L K + + ++ C+ + L N +N + R ++V
Sbjct: 460 TSPRRLANKRIGQIKSKKFRCSAKEQYAIPGTEDSRLNNDCNNDPVCPAKCRCESNVVDC 519
Query: 414 DN-RLQSIPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRK 471
N RL IP + T E + N + +EA G FK L++LK++ ++ + ++ +
Sbjct: 520 SNLRLDRIPEHVPASTT---EPRLNNNEITTIEAMGAFKTLTHLKKINLSN-NKISEIED 575
Query: 472 GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAWPELRT 530
GAF + + GL L L L+ N + + S +R
Sbjct: 576 GAF-EGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRL 634
Query: 531 IDIAENPI 538
+ + +N +
Sbjct: 635 LSLYDNTL 642
Score = 172 (65.6 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 54/193 (27%), Positives = 85/193 (44%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
I + E L G LT I+ N F GL LR L L +N++ ++ ++ LE L + +
Sbjct: 52 IPRNTERLELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNR 111
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N L F+ + L RL+++ + + + + AF IE+ A
Sbjct: 112 NQLHQLPELLFQKNAALSRLDLS-ENFIQAIPRKAFRGATDIKNLQLDKNHIS-CIEDGA 169
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
+ L L L N +S S P+LRT + N + C C + WL + L R
Sbjct: 170 FRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLVCDCVLSWLSQWLRERPNI 229
Query: 558 AVF--CNSPAPLK 568
+F C+SPAPL+
Sbjct: 230 GLFTQCSSPAPLR 242
Score = 165 (63.1 bits), Expect = 8.9e-19, Sum P(2) = 8.9e-19
Identities = 51/189 (26%), Positives = 83/189 (43%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
C G G T I + ++ +R L N ++SIP S +L +++ N S L
Sbjct: 288 CRGKGPTLIPSSLPDSMTEIR---LEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPD 344
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
F+GL L L + G + +T + +G F D + + L NL
Sbjct: 345 AFQGLRSLNSLVLYG-NKITDLPRGVF-DGLHALQLLLLNANKIHCLRANTFQDLQNLSL 402
Query: 508 LNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNS 563
L+L +N + ++ + ++T+ +A+NP C CN+ WL + L R N TS C S
Sbjct: 403 LSLYDNKIQTLAKGTFSSLRAIQTLHLAQNPFICDCNLKWLADYL-RSNPIETSGARCTS 461
Query: 564 PAPLKYKSL 572
P L K +
Sbjct: 462 PRRLANKRI 470
Score = 154 (59.3 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 47/172 (27%), Positives = 73/172 (42%)
Query: 412 LTDNRLQSIPTKQLSK-LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 470
L +N + +I K LT L+++ + N S +E G F+G S + L +T A+ L
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLT-ANQLDLAH 598
Query: 471 KGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELR 529
G F I ++ GL N+ L+L +N T+ + L
Sbjct: 599 SGMFRGLEGLRMLMLRNNRIS-CIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLS 657
Query: 530 TIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
T+++ NP C C + WL L R T C+ PA LK L ++A D
Sbjct: 658 TLNLLANPFNCNCRLAWLSSWLRNRKIVTGNPRCHRPAFLKEIPLQDVAAPD 709
Score = 152 (58.6 bits), Expect = 8.9e-19, Sum P(2) = 8.9e-19
Identities = 46/155 (29%), Positives = 74/155 (47%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+E+ G N ++RI++ F GL LR+L L +NQ+ +V +F + L LR+ N
Sbjct: 58 RLELNGNN-LTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQ 116
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
L + F LS LDL + I AFRG + +++L L N + I + L
Sbjct: 117 LPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGL 176
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
E L + N S + F + L+ + ++NL
Sbjct: 177 EVLTLNNNNISSIPVSSFNHMPKLRTFRLH-SNNL 210
Score = 135 (52.6 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 36/131 (27%), Positives = 61/131 (46%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
+ +T +R L+ N ++S+P +F L + + N + LA AF GL L++L L
Sbjct: 302 DSMTEIR---LEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 358
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T++ F GL L+ L+L N++ + L L L + N L G F
Sbjct: 359 GNKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTF 418
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 419 SSLRAIQTLHL 429
Score = 135 (52.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/144 (29%), Positives = 64/144 (44%)
Query: 106 PQQIVCSIISPRRVEIFGQNRISRID-QACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
P+ + S PR N I+ I+ F+ LT L+ + L +N++ + +F
Sbjct: 528 PEHVPASTTEPR----LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASS 583
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N G F GL L L LR ++ I +N+F GL +R L L DN L
Sbjct: 584 VNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLT 643
Query: 225 SIPTKQLSKLTRLEELEIGQNGFS 248
+I L L L + N F+
Sbjct: 644 TIAPGAFDTLQSLSTLNLLANPFN 667
Score = 134 (52.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 47/150 (31%), Positives = 68/150 (45%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I I F LR + L +NQ+ + +F L L L + N T L G F
Sbjct: 311 QNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITDLPRGVF 370
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+GL L L L + + N F+ L L L L DN++Q++ S L ++ L +
Sbjct: 371 DGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLRAIQTLHLA 430
Query: 244 QNGFSMLEAGC-FKGLS-YLKR--LEITGA 269
QN F C K L+ YL+ +E +GA
Sbjct: 431 QNPFI---CDCNLKWLADYLRSNPIETSGA 457
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVPTP-SFIYLGMLAELRVGLNVFTTLADGAFN 184
R+ RI + T R L++N++ ++ +F L L ++ + N + + DGAF
Sbjct: 523 RLDRIPEHVPASTTEPR---LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFE 579
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
G ++ L L L FRGL GLR L+L +NR+ I + L + L +
Sbjct: 580 GASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYD 639
Query: 245 NGFSMLEAGCFKGLSYLKRLEI 266
N + + G F L L L +
Sbjct: 640 NTLTTIAPGAFDTLQSLSTLNL 661
Score = 126 (49.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 48/171 (28%), Positives = 73/171 (42%)
Query: 9 LRSKCMN-PYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS--AIP 65
L + C N P P++ + LD IP H S L+ N I T+++ A
Sbjct: 496 LNNDCNNDPVCPAKCRCESNVVDCSNLRLDRIPEHVPASTTEPRLNNNEITTIEAMGAFK 555
Query: 66 IYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQ 124
L+ ++LS+ I G FE + EL L N+ + + R+ +
Sbjct: 556 TLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRN 615
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
NRIS I F GL +R+L L DN L ++ +F L L+ L + N F
Sbjct: 616 NRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNLLANPF 666
Score = 103 (41.3 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 38/164 (23%), Positives = 74/164 (45%)
Query: 39 IPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVEL 97
IP + + +RL L+ N + ++ L L+ + L + + G F+ +L L
Sbjct: 48 IPRNIPRNTERLELNGNNLTRINRNDFTGLKYLRVLQLMENQIVTVERGAFDEMRELERL 107
Query: 98 QLNHNK-H-FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 155
+LN N+ H P+ + + R+++ +N I I + F G T ++ L LD N + +
Sbjct: 108 RLNRNQLHQLPELLFQKNAALSRLDL-SENFIQAIPRKAFRGATDIKNLQLDKNHISCIE 166
Query: 156 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
+F + L L + N +++ +FN + +L L L
Sbjct: 167 DGAFRAMRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNL 210
Score = 102 (41.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N +T+ + L +DL ++++++++F +S L +L+L+ N L+
Sbjct: 756 ITELYLDGNQLSTVPK-ELSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALR 814
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IPT S L L L + N S L G F L L I GA+ L
Sbjct: 815 CIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAI-GANPL 861
Score = 101 (40.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 44/184 (23%), Positives = 76/184 (41%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L S+V N+ LQ++P +T EL + N S + K LS K L++ SN
Sbjct: 734 LESVVRCSNKHLQALPKGTPRNIT---ELYLDGNQLSTVP----KELSSFKSLQLVDLSN 786
Query: 272 --LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML 329
++ + +F + I A GL +L L+L N + + +
Sbjct: 787 NRISSLTNSSFTNMSQLTTLILSYNALRC-IPTLAFSGLRSLRLLSLHGNDISELPDGIF 845
Query: 330 AWPE-LRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDL 386
+ + L + I NP+ C C + WL + + + C SP ++ K L++ A+
Sbjct: 846 SDAQSLSHLAIGANPLHCDCGLRWLSDWVKTGYKEPGIARCASPHGMEGKLLLTTPAKRF 905
Query: 387 GCAG 390
C G
Sbjct: 906 ECQG 909
Score = 91 (37.1 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 35/141 (24%), Positives = 64/141 (45%)
Query: 38 VIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVE 96
+IPS S+ + L N IK++ A Y L+ +DLS+ + F+ L
Sbjct: 295 LIPSSLPDSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 354
Query: 97 LQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSV 154
L L NK P+ + + + + + + N+I + F+ L L +L L DN+++++
Sbjct: 355 LVLYGNKITDLPRGVFDGLHALQLL-LLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTL 413
Query: 155 PTPSFIYLGMLAELRVGLNVF 175
+F L + L + N F
Sbjct: 414 AKGTFSSLRAIQTLHLAQNPF 434
Score = 73 (30.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 249
+ +D G GL NI N R L L N L I + L L L++ +N
Sbjct: 36 TTVDCHGLGLKNIPRNIPRNTERLE---LNGNNLTRINRNDFTGLKYLRVLQLMENQIVT 92
Query: 250 LEAGCFKGLSYLKRLEI 266
+E G F + L+RL +
Sbjct: 93 VERGAFDEMRELERLRL 109
Score = 71 (30.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L++IP + + + T E LE+ N + + F GL YL+ L++ + + V +GAF D
Sbjct: 45 LKNIP-RNIPRNT--ERLELNGNNLTRINRNDFTGLKYLRVLQLM-ENQIVTVERGAF-D 99
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAE 341
+ E L L+L EN + ++ +++ + + +
Sbjct: 100 EMRELERLRLNRNQLHQLPELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDK 159
Query: 342 NPIEC 346
N I C
Sbjct: 160 NHISC 164
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 264 (98.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 97/323 (30%), Positives = 146/323 (45%)
Query: 30 NLQEANLDVIPSHSNPSIQRLVLST--NRIKTV--DSAIPIYLSLQHVDLSHTTWLIIPI 85
++ + L +P + S VLS NRI V + +P Y SL+ +DLS + +
Sbjct: 62 SINQNELTAVPFLGDASSNITVLSLVHNRISEVVAEQLLP-YSSLESLDLSSNSISELKA 120
Query: 86 GGFEPQEKLVELQLNHNKHFPQQIVC-SIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
G F P + L L L+ NK + C IS V QNR+S + F L+ L++L
Sbjct: 121 GSFPPMQ-LKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFT-LSQLQVL 178
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L N++R V + F L L L++ N T L DGA GL + L+L LT ++
Sbjct: 179 ELRRNRIRVVESLIFKELKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNLTELNK 238
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
GL LR L + N + I RLEEL++ N S LE F GLS L+ L
Sbjct: 239 GWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSL 298
Query: 265 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE--GALVGLPNLYHLNLKENAFT 322
+ G + ++ + +G F+ IE+ G VGL L L L+ N
Sbjct: 299 NL-GDNQISHLGEGVFSSLANVRTLDIRNNEISLAIEDFIGMFVGLKRLNSLVLQNNKIR 357
Query: 323 SFSESML-AWPELRTIDIAENPI 344
+ ++ EL +D+++N I
Sbjct: 358 TITKRAFEGLMELENLDLSKNGI 380
Score = 226 (84.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 83/351 (23%), Positives = 149/351 (42%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH- 104
S++ L LS+N I + + + L++++LS + G F L+ L++N N+
Sbjct: 104 SLESLDLSSNSISELKAGSFPPMQLKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLS 163
Query: 105 -FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
P ++ +S +V +NRI ++ F+ L AL+ L + N + + + L
Sbjct: 164 LLPDKVFT--LSQLQVLELRRNRIRVVESLIFKELKALKSLKMQRNGITKLMDGALFGLE 221
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
+ EL + N T L G GL L L + + I +A+ L L L+ N L
Sbjct: 222 NMEELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHL 281
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK--GAFA 281
+ + L+ L+ L +G N S L G F L+ ++ L+I + G F
Sbjct: 282 SRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEISLAIEDFIGMFV 341
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 341
I + A GL L +L+L +N S +L+T+D+
Sbjct: 342 GLKRLNSLVLQNNKIRT-ITKRAFEGLMELENLDLSKNGIMSIHPDAFTHLKLKTLDLNS 400
Query: 342 NPIECGCNILWLREMLVR---RNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
+ + C C + WL + L+ + + C PA L S++++ E+ C+
Sbjct: 401 SSLLCDCQLQWLGQWLINSRFQQSCTAVCAHPASLAGSSVLAVKPEEFVCS 451
Score = 180 (68.4 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 82/334 (24%), Positives = 145/334 (43%)
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
+ +L L N++ V + L L + N + L G+F + +L L+L ++
Sbjct: 81 ITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPM-QLKYLNLSKNKIS 139
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 260
++ F +S L L + NRL +P K + L++L+ LE+ +N ++E+ FK L
Sbjct: 140 SLEPGCFGNISSLLVLKINQNRLSLLPDKVFT-LSQLQVLELRRNRIRVVESLIFKELKA 198
Query: 261 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENA 320
LK L++ + +T++ GA + +G L GL L L + +N
Sbjct: 199 LKSLKMQ-RNGITKLMDGALFGLENMEELELEYNNLTE-LNKGWLYGLHMLRILRVNQNN 256
Query: 321 FTSFSESMLAWP---ELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLK--- 374
AW L +D++ N + + W+ L + + N + L
Sbjct: 257 IGLIRAD--AWEFCHRLEELDLSFNHLSRLED--WVFAGLSLLQSLNLGDNQISHLGEGV 312
Query: 375 YKSLISLSAEDLGCAGAGLTNISD--NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
+ SL ++ D+ L I D F GL L SLVL +N++++I + L LE
Sbjct: 313 FSSLANVRTLDIRNNEISLA-IEDFIGMFVGLKRLNSLVLQNNKIRTITKRAFEGLMELE 371
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
L++ +NG + F L LK L++ +S L
Sbjct: 372 NLDLSKNGIMSIHPDAFTHLK-LKTLDLNSSSLL 404
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 42/178 (23%), Positives = 73/178 (41%)
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
L L L+ N L + + L+ L+ L +G N S L G F L+ ++ L+I
Sbjct: 271 LEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIRNNEIS 330
Query: 467 TRVRK--GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA 524
+ G F I + A GL L +L+L +N S
Sbjct: 331 LAIEDFIGMFVGLKRLNSLVLQNNKIRTITKR-AFEGLMELENLDLSKNGIMSIHPDAFT 389
Query: 525 WPELRTIDIAENPIECGCNILWLREMLVR---RNTSAVFCNSPAPLKYKSLISLSAED 579
+L+T+D+ + + C C + WL + L+ + + C PA L S++++ E+
Sbjct: 390 HLKLKTLDLNSSSLLCDCQLQWLGQWLINSRFQQSCTAVCAHPASLAGSSVLAVKPEE 447
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 264 (98.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 91/353 (25%), Positives = 163/353 (46%)
Query: 45 PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEP-QEKLVELQLNHN 102
P+++ L LS+N I + S+ P + L++++LS+ + G F+ L+ ++LN N
Sbjct: 144 PALESLDLSSNIISEIKTSSFP-RMQLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRN 202
Query: 103 KH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
+ P +I + + +E+ +NRI ++ F+GL +LR L + N + + +F
Sbjct: 203 RMSMIPPKIF-KLPHLQFLEL-KRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFF 260
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
L + EL + N T + G GL L L + + IS +A+ L L L+
Sbjct: 261 GLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSY 320
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG-- 278
N+L + L+ LE L +G N + + G F+ LS L+ L++ +
Sbjct: 321 NQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASE 380
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTID 338
AFA I + A +GL +L HL+L NA S E+ + L+ +
Sbjct: 381 AFAGLTSLTKLILQGNQIKS-ITKKAFIGLESLEHLDLNNNAIMSIQENAFSQTHLKELI 439
Query: 339 IAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPLKYKSLISLSAEDLGC 388
+ + + C C++ WL + LV N + V C P L +S++++ +D C
Sbjct: 440 LNTSSLLCDCHLKWLLQWLVDNNFQHSVNVSCAHPEWLAGQSILNVDLKDFVC 492
Score = 257 (95.5 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 96/345 (27%), Positives = 158/345 (45%)
Query: 36 LDVIPSHSNPS--IQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQE 92
L IP P+ I L L N I +++ A+ Y +L+ +DLS I F P+
Sbjct: 109 LTEIPYFGEPTSNITLLSLVHNIIPEINAQALQFYPALESLDLSSNIISEIKTSSF-PRM 167
Query: 93 KLVELQLNHNKHFPQQIVC--SIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQ 150
+L L L++N+ + C ++ S V +NR+S I F+ L L+ L L N+
Sbjct: 168 QLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFK-LPHLQFLELKRNR 226
Query: 151 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGL 210
++ V +F L L L++ N + L DGAF GL + L+L LT ++ GL
Sbjct: 227 IKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGL 286
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
L+ L ++ N ++ I RL EL++ N + L+ F GLS L+RL + G +
Sbjct: 287 RMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNL-GDN 345
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG--ALVGLPNLYHLNLKENAFTSFSE-S 327
+T + G F IE+ A GL +L L L+ N S ++ +
Sbjct: 346 RVTHIADGVFRFLSNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKA 405
Query: 328 MLAWPELRTIDIAENPI----ECGCNILWLREMLVRRNTSAVFCN 368
+ L +D+ N I E + L+E+++ NTS++ C+
Sbjct: 406 FIGLESLEHLDLNNNAIMSIQENAFSQTHLKELIL--NTSSLLCD 448
Score = 157 (60.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
+ IS +A+ L L L+ N+L + L+ LE L +G N + + G F+ L
Sbjct: 299 IERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFL 358
Query: 453 SYLKRLEITGASNLTRVRKG--AFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNL 510
S L+ L++ + AFA I ++ A +GL +L HL+L
Sbjct: 359 SNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKK-AFIGLESLEHLDL 417
Query: 511 KENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPL 567
NA S E+ + L+ + + + + C C++ WL + LV N + V C P L
Sbjct: 418 NNNAIMSIQENAFSQTHLKELILNTSSLLCDCHLKWLLQWLVDNNFQHSVNVSCAHPEWL 477
Query: 568 KYKSLISLSAED 579
+S++++ +D
Sbjct: 478 AGQSILNVDLKD 489
Score = 149 (57.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 63/272 (23%), Positives = 116/272 (42%)
Query: 300 IEEGALVGLPN-LYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+E G L + L + L N + + P L+ +++ N I+ + + + L
Sbjct: 182 LEAGCFDNLSSSLLVVKLNRNRMSMIPPKIFKLPHLQFLELKRNRIKIVEGLTF--QGLD 239
Query: 359 RRNTSAVFCNSPAPLKYKSLISLS-AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL 417
+ + N + LK + L+ E+L LT ++ GL L+ L ++ N +
Sbjct: 240 SLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAI 299
Query: 418 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADX 477
+ I RL EL++ N + L+ F GLS L+RL + G + +T + G F
Sbjct: 300 ERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNL-GDNRVTHIADGVFRFL 358
Query: 478 XXXXXXXXXXXXXXXIIEE--DALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIA 534
IE+ +A GL +L L L+ N S ++ + + L +D+
Sbjct: 359 SNLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLN 418
Query: 535 ENPI----ECGCNILWLREMLVRRNTSAVFCN 562
N I E + L+E+++ NTS++ C+
Sbjct: 419 NNAIMSIQENAFSQTHLKELIL--NTSSLLCD 448
>FB|FBgn0029114 [details] [associations]
symbol:Tollo "Tollo" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0007352 "zygotic specification of dorsal/ventral
axis" evidence=IEA] [GO:0006963 "positive regulation of
antibacterial peptide biosynthetic process" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0009620 "response to fungus" evidence=IEA] [GO:0060049
"regulation of protein glycosylation" evidence=IMP] [GO:0048935
"peripheral nervous system neuron development" evidence=IMP]
[GO:0002227 "innate immune response in mucosa" evidence=IMP]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027202
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 EMBL:AE014296 InterPro:IPR003591 SMART:SM00369
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0004888
GO:GO:0002227 GO:GO:0048935 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00700000104286 GO:GO:0060049 SUPFAM:SSF52200
PANTHER:PTHR24371:SF0 HSSP:O60603 FlyBase:FBgn0029114 EMBL:AF204158
EMBL:AF247764 EMBL:AY118551 RefSeq:NP_524757.1 UniGene:Dm.3403
SMR:Q9V477 IntAct:Q9V477 MINT:MINT-316842 STRING:Q9V477
EnsemblMetazoa:FBtr0075607 GeneID:44497 KEGG:dme:Dmel_CG6890
UCSC:CG6890-RA CTD:44497 InParanoid:Q9V477 OMA:TIRTHNG
GenomeRNAi:44497 NextBio:837325 Uniprot:Q9V477
Length = 1346
Score = 237 (88.5 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 103/412 (25%), Positives = 183/412 (44%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH 104
S++ + LS NR+ ++ + LQ + L + + ++ G F +L+ L L N+
Sbjct: 259 SLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNEL 318
Query: 105 FPQQI-VCSIISPRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
Q I + + +R+ + N+ISR++ F L +L+IL L+DN + +P F
Sbjct: 319 NSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFAD 378
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L L + N + + GL L L L ++ + + S L+ L L DN
Sbjct: 379 LTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDN 438
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
+LQ++P + L+ + L+ L++G+N S +E L L L +T ++LT +R+G F
Sbjct: 439 KLQAVP-EALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMT-ENSLTHIRRGVF- 495
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 341
D IE G+L L + L N S + P L ++I+
Sbjct: 496 DRMSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSIAGLFTELPNLVWLNISG 555
Query: 342 NPIECG--CNI-LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISD 398
N +E +I + L+ + VR N N + +S +SLS D + LT I+
Sbjct: 556 NRLEKFDYSHIPIGLQWLDVRANRITQLGNY---FEIESELSLSTFD--ASYNLLTEITA 610
Query: 399 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 450
++ + + L L DN++ I K L +++ +N + LE +
Sbjct: 611 SSIP--NSVEVLYLNDNQISKIQPYTFFKKPNLTRVDLVRNRLTTLEPNALR 660
Score = 221 (82.9 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 119/439 (27%), Positives = 190/439 (43%)
Query: 53 STNRIKTVDSAIPIYLSLQHVDLS-HTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVC 111
ST ++ ++ + L+ +DLS + WLI P G P + L L ++NK Q +
Sbjct: 137 STMSLEMASNSFVEFRQLERLDLSLNNIWLI-PDGMVCPLKSLQHLNASYNKI---QDIS 192
Query: 112 SIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 171
+ F + SR + C G T L+ L L N++ S+PT LG L L +
Sbjct: 193 NFY-------FSASLSSRKARVC--GST-LQSLDLSANKMVSLPTAMLSALGRLTHLNMA 242
Query: 172 LNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR--------------------GLS 211
N + LAD AF GL L +DL LT++ F G+
Sbjct: 243 KNSMSFLADRAFEGLLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIF 302
Query: 212 G-LRSLVLTD---NRLQS--IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
G L L++ D N L S I L RL L++ N S LEA F+ L+ L+ L+
Sbjct: 303 GELAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILK 362
Query: 266 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
+ + + ++ G FAD IE+ L GL NL L+L N +
Sbjct: 363 LED-NYIDQLPGGIFADLTNLHTLILSRNRISV-IEQRTLQGLKNLLVLSLDFNRISRMD 420
Query: 326 E-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISL-SA 383
+ S++ +L+ + + +N ++ L ++L T V N + ++ S+ L S
Sbjct: 421 QRSLVNCSQLQDLHLNDNKLQAVPEALAHVQLL---KTLDVGENMISQIENTSITQLESL 477
Query: 384 EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 443
L LT+I F +S L+ L L+ N+L+SI L + ++L+ + + N
Sbjct: 478 YGLRMTENSLTHIRRGVFDRMSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKS 537
Query: 444 LEAGCFKGLSYLKRLEITG 462
+ AG F L L L I+G
Sbjct: 538 I-AGLFTELPNLVWLNISG 555
Score = 190 (71.9 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 102/456 (22%), Positives = 184/456 (40%)
Query: 88 FEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLD 147
F E+L +L LN+ P +VC + S + + N+I I F + R +
Sbjct: 151 FRQLERL-DLSLNNIWLIPDGMVCPLKSLQHLNA-SYNKIQDISNFYFSASLSSRKARVC 208
Query: 148 DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAF 207
+ L+S L + N +L + LGRL+ L++ ++ ++D AF
Sbjct: 209 GSTLQS--------------LDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAF 254
Query: 208 RGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 267
GL LR + L+ NRL S+P + ++ +L+E+ + N ++L G F L+ L L++
Sbjct: 255 EGLLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLA 314
Query: 268 GAS-NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE 326
N + F +E L +L L L++N
Sbjct: 315 SNELNSQWINAATFVGLKRLMMLDLSANKISR-LEAHIFRPLASLQILKLEDNYIDQLPG 373
Query: 327 SMLA-WPELRTIDIAENPIEC--GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA 383
+ A L T+ ++ N I + L+ +LV S F N + + +SL++ S
Sbjct: 374 GIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLV---LSLDF-NRISRMDQRSLVNCSQ 429
Query: 384 -EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
+DL L + + A + L++L + +N + I +++L L L + +N +
Sbjct: 430 LQDLHLNDNKLQAVPE-ALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLT 488
Query: 443 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGL 502
+ G F +S L+ L ++ + L + G+ I L
Sbjct: 489 HIRRGVFDRMSSLQILNLS-QNKLKSIEAGSLQRNSQLQAIRLDGNQLKSIA--GLFTEL 545
Query: 503 PNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 538
PNL LN+ N F S + L+ +D+ N I
Sbjct: 546 PNLVWLNISGNRLEKFDYSHIPIG-LQWLDVRANRI 580
Score = 149 (57.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 81/380 (21%), Positives = 147/380 (38%)
Query: 176 TTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVL-TDNRLQSIPTKQLS-- 232
++L+ +F L L L + L N++D +FRGL LR+L + T N S + +++
Sbjct: 87 SSLSPDSFRSLVELRDLTIEYCKLGNLTDGSFRGLQELRNLTIRTHNGDWSTMSLEMASN 146
Query: 233 ---KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF-ADXXXXXX 288
+ +LE L++ N ++ G L L+ L + + + + F A
Sbjct: 147 SFVEFRQLERLDLSLNNIWLIPDGMVCPLKSLQHLNAS-YNKIQDISNFYFSASLSSRKA 205
Query: 289 XXXXXXXXXXXIEEGALVGLPN--------LYHLNLKENAFTSFSESML-AWPELRTIDI 339
+ +V LP L HLN+ +N+ + ++ LR +D+
Sbjct: 206 RVCGSTLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDL 265
Query: 340 AENPIECGCNILWLR-EMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISD 398
+ N + L+ + L N AP + L L DL I+
Sbjct: 266 SANRLTSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNELNSQWINA 325
Query: 399 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
F GL L L L+ N++ + L L+ L++ N L G F L+ L L
Sbjct: 326 ATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTL 385
Query: 459 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF 518
I + ++ + + + ++ +LV L L+L +N +
Sbjct: 386 -ILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRM-DQRSLVNCSQLQDLHLNDNKLQAV 443
Query: 519 SESMLAWPELRTIDIAENPI 538
E++ L+T+D+ EN I
Sbjct: 444 PEALAHVQLLKTLDVGENMI 463
Score = 128 (50.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 72/320 (22%), Positives = 128/320 (40%)
Query: 46 SIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
++ L+LS NRI ++ + +L + L + +L +L LN NK
Sbjct: 381 NLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKL 440
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
+ + + + +++ G+N IS+I+ L +L L + +N L + F +
Sbjct: 441 QAVPEALAHVQLLKTLDV-GENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMS 499
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + N ++ G+ +L A+ L G L +I+ F L L L ++ NRL
Sbjct: 500 SLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSIA-GLFTELPNLVWLNISGNRL 558
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL-TRVRKGAFAD 282
+ + L+ L++ N + L F+ S L + NL T + + +
Sbjct: 559 EKFDYSHIP--IGLQWLDVRANRITQL-GNYFEIESELSLSTFDASYNLLTEITASSIPN 615
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-P--ELRTID- 338
I+ PNL ++L N T+ + L P E R I
Sbjct: 616 SVEVLYLNDNQISK---IQPYTFFKKPNLTRVDLVRNRLTTLEPNALRLSPIAEDREIPE 672
Query: 339 --IAENPIECGCNILWLREM 356
I N EC CN+ WL+++
Sbjct: 673 FYIGHNAYECDCNLDWLQKV 692
Score = 126 (49.4 bits), Expect = 0.00044, P = 0.00044
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYLD N R + + +FI L L + + L + F GL L L L+ L ++
Sbjct: 796 LYLDGNNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALN 855
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
N F+GL L+ L L N + +I T + L L+ L + N + F SYL
Sbjct: 856 GNEFQGLDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHNAITSFAVWNFLP-SYLNE 914
Query: 264 LEITGASN 271
L + ASN
Sbjct: 915 LRL--ASN 920
Score = 77 (32.2 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 37/148 (25%), Positives = 56/148 (37%)
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 469
L L N + + + RL+ L + + +L F GL L+ L++ SN +
Sbjct: 796 LYLDGNNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQ--SNQLKA 853
Query: 470 RKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLN---LKENAFTSFSESMLAWP 526
G + I D L +LYHL L NA TSF+
Sbjct: 854 LNGN--EFQGLDNLQELYLQHNAIATIDTLT-FTHLYHLKILRLDHNAITSFAVWNFLPS 910
Query: 527 ELRTIDIAENPIECGCNIL-WLREMLVR 553
L + +A NP C C + LR+ + R
Sbjct: 911 YLNELRLASNPWTCSCEFIDKLRDYINR 938
Score = 75 (31.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 377 SLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
S I + + L G + +AF G L+ L L +R++ + + L LE L++
Sbjct: 787 SHIPMDSTQLYLDGNNFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQL 846
Query: 437 GQNGFSMLEAGCFKGLSYLKRL 458
N L F+GL L+ L
Sbjct: 847 QSNQLKALNGNEFQGLDNLQEL 868
Score = 74 (31.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 26/85 (30%), Positives = 37/85 (43%)
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
L E L L ++ N F+GL L+ L L N + +I T + L L+ L + N
Sbjct: 839 LELEVLQLQSNQLKALNGNEFQGLDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHNA 898
Query: 441 FSMLEAGCFKGLSYLKRLEITGASN 465
+ F SYL L + ASN
Sbjct: 899 ITSFAVWNFLP-SYLNELRL--ASN 920
Score = 70 (29.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 396 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 455
+ + F GL L L L N+L+++ + L L+EL + N + ++ F L +L
Sbjct: 830 LHNRTFYGLLELEVLQLQSNQLKALNGNEFQGLDNLQELYLQHNAIATIDTLTFTHLYHL 889
Query: 456 KRLEI 460
K L +
Sbjct: 890 KILRL 894
Score = 64 (27.6 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 503 PNLYHLNLKENAFTSFSESMLAW-P--ELRTID---IAENPIECGCNILWLREM 550
PNL ++L N T+ + L P E R I I N EC CN+ WL+++
Sbjct: 639 PNLTRVDLVRNRLTTLEPNALRLSPIAEDREIPEFYIGHNAYECDCNLDWLQKV 692
Score = 38 (18.4 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 19/85 (22%), Positives = 30/85 (35%)
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 492
+L + N F L++ F G LK L + S + + F
Sbjct: 795 QLYLDGNNFRELQSHAFIGRKRLKVLHLNH-SRIEVLHNRTFYGLLELEVLQLQSNQLKA 853
Query: 493 IIEEDALVGLPNLYHLNLKENAFTS 517
+ + GL NL L L+ NA +
Sbjct: 854 L-NGNEFQGLDNLQELYLQHNAIAT 877
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 256 (95.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 89/366 (24%), Positives = 169/366 (46%)
Query: 31 LQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFE 89
+ E N + +S +++ L LS+N I + S+ P +SL++++LS+ + G F+
Sbjct: 131 IPEINAEAFELYS--ALESLDLSSNIISEIKTSSFP-RMSLKYLNLSNNRISTLEAGCFD 187
Query: 90 P-QEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
+ L+ ++LN N+ P ++ + + +E+ +NRI ++ F+GL +LR L +
Sbjct: 188 NLSDSLLVVKLNRNRISMIPPKVF-KLPHLQFLEL-KRNRIKIVEGLTFQGLDSLRSLKM 245
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
N + + +F L + EL + N T + G GL L L + + IS +A
Sbjct: 246 QRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDA 305
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ L L L+ N+L + L+ LE L +G N + + G F+ LS L+ L++
Sbjct: 306 WEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDL 365
Query: 267 TGASNLTRVRKGAFA-DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
+ + A + + A +GL +L +L+L NA S
Sbjct: 366 RNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQ 425
Query: 326 ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPLKYKSLISLS 382
E+ + L+ + + + + C C++ WL + LV N + V C P L +S++++
Sbjct: 426 ENAFSQTHLKGLVLNTSSLLCDCHLKWLLQWLVDNNFHHSVNVSCAHPEWLAGQSILNVD 485
Query: 383 AEDLGC 388
+D C
Sbjct: 486 LKDFVC 491
Score = 251 (93.4 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 92/334 (27%), Positives = 152/334 (45%)
Query: 45 PSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P+I L L N I +++ A +Y +L+ +DLS I F P+ L L L++N+
Sbjct: 119 PNITLLSLVHNLIPEINAEAFELYSALESLDLSSNIISEIKTSSF-PRMSLKYLNLSNNR 177
Query: 104 HFPQQIVC--SIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ C ++ V +NRIS I F+ L L+ L L N+++ V +F
Sbjct: 178 ISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFK-LPHLQFLELKRNRIKIVEGLTFQG 236
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L L++ N + L DGAF GL + L+L LT ++ GL L+ L ++ N
Sbjct: 237 LDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQN 296
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
++ I RL EL++ N + L+ F GLS L+RL + G + +T + G F
Sbjct: 297 AIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNL-GDNRVTHIADGVFR 355
Query: 282 DXXXXXXXXXXXXXXXXXIEEG--ALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTID 338
IE+ A GL +L L L+ N S ++ + + L +D
Sbjct: 356 FLSNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLD 415
Query: 339 IAENPI----ECGCNILWLREMLVRRNTSAVFCN 368
+ N I E + L+ +++ NTS++ C+
Sbjct: 416 LNNNAIMSIQENAFSQTHLKGLVL--NTSSLLCD 447
Score = 157 (60.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 85/385 (22%), Positives = 160/385 (41%)
Query: 189 LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT-RLEELEIGQNGF 247
+S+LDL L+N + N + L+ + + N L IP + T + L + N
Sbjct: 76 ISSLDLSHNRLSNWN-NTLESQT-LQEVKMNYNELTEIP--YFGEPTPNITLLSLVHNLI 131
Query: 248 SMLEAGCFKGLSYLKRLEITGASNL-TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV 306
+ A F+ S L+ L+++ SN+ + ++ +F +E G
Sbjct: 132 PEINAEAFELYSALESLDLS--SNIISEIKTSSFP--RMSLKYLNLSNNRISTLEAGCFD 187
Query: 307 GLPN-LYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 365
L + L + L N + + P L+ +++ N I+ + + + L + +
Sbjct: 188 NLSDSLLVVKLNRNRISMIPPKVFKLPHLQFLELKRNRIKIVEGLTF--QGLDSLRSLKM 245
Query: 366 FCNSPAPLKYKSLISLS-AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 424
N + LK + L+ E+L LT ++ GL L+ L ++ N ++ I
Sbjct: 246 QRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDA 305
Query: 425 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 484
RL EL++ N + L+ F GLS L+RL + G + +T + G F
Sbjct: 306 WEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNL-GDNRVTHIADGVFRFLSNLQTLD 364
Query: 485 XXXXXXXXIIEE--DALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPI--- 538
IE+ +A GL +L L L+ N S ++ + + L +D+ N I
Sbjct: 365 LRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSI 424
Query: 539 -ECGCNILWLREMLVRRNTSAVFCN 562
E + L+ +++ NTS++ C+
Sbjct: 425 QENAFSQTHLKGLVL--NTSSLLCD 447
Score = 146 (56.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 46/192 (23%), Positives = 86/192 (44%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
+ IS +A+ L L L+ N+L + L+ LE L +G N + + G F+ L
Sbjct: 298 IEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFL 357
Query: 453 SYLKRLEITGASNLTRVRKG--AFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNL 510
S L+ L++ + AF+ + ++ A +GL +L +L+L
Sbjct: 358 SNLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQK-AFIGLESLEYLDL 416
Query: 511 KENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPL 567
NA S E+ + L+ + + + + C C++ WL + LV N + V C P L
Sbjct: 417 NNNAIMSIQENAFSQTHLKGLVLNTSSLLCDCHLKWLLQWLVDNNFHHSVNVSCAHPEWL 476
Query: 568 KYKSLISLSAED 579
+S++++ +D
Sbjct: 477 AGQSILNVDLKD 488
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 252 (93.8 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 84/321 (26%), Positives = 147/321 (45%)
Query: 47 IQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-- 103
+Q+L L+ N+I + A SL+ +DLSH + F L L+L+ N
Sbjct: 239 LQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSIT 298
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
+ + +++ G NRI + + F+GL L +L L++NQL+ + +F+ L
Sbjct: 299 SLRPRTFKDLQFLEELQL-GHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLY 357
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
+A + + N TL + F G+ +L +L L + L+ I N F L+ LR L L N +
Sbjct: 358 NVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAI 417
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADX 283
+I + +L L EL++ N S L F GLS L+ L ++ + + + + F+
Sbjct: 418 STIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLS-FNQIMDISQNTFSPL 476
Query: 284 XXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE--LRTIDIAE 341
++ + L NL +L+L+ N+ +FS L P L + +
Sbjct: 477 RRLFWLDLSHNQLAT-LDNAVITQLANLRYLSLRNNSLETFSVGFLC-PSFTLEQLWLGG 534
Query: 342 NPIECGCNILWLREMLVRRNT 362
N C C++ LR+ +R T
Sbjct: 535 NNWHCNCSLKGLRDFALRHPT 555
Score = 251 (93.4 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 94/422 (22%), Positives = 178/422 (42%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
++++ ++Q F GL +L L+L+ N+L+ + +F++ L L + N+F+ + +G F
Sbjct: 103 SQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFA 162
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L+L L + D F L LR L+L N+L + + LT L+EL++
Sbjct: 163 GLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSG 222
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N ++ F L L++L + + + + AF E+
Sbjct: 223 NALKGIKINIFVKLQKLQKLYLNN-NQINAIAPRAFMGMKSLRWLDLSHNRLTSLYED-T 280
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILW-LREM----LVR 359
+GL +L+ L L N+ TS + +L+ ++ ++ G N +W L E L +
Sbjct: 281 FLGLLSLHVLRLSTNSITSLRPR--TFKDLQFLE----ELQLGHNRIWSLAERTFDGLGQ 334
Query: 360 RNTSAVFCNSPAPLKYKSLISL-SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
++ N +K + + L + + + + + + F G++ L SL L + L
Sbjct: 335 LEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLS 394
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
I S LT L L + N S +E F+ L L L++ + L+ + F
Sbjct: 395 KIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKH-NRLSHLSPQLFVGLS 453
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENP 537
I ++ L L+ L+L N + +++ LR + + N
Sbjct: 454 NLEYLFLSFNQIMDI-SQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNS 512
Query: 538 IE 539
+E
Sbjct: 513 LE 514
Score = 230 (86.0 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 102/427 (23%), Positives = 179/427 (41%)
Query: 30 NLQEANLDVIPSHSNP---SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPI 85
+LQ + L + H+ S+ L L NR+K + ++ +L + L++ + +
Sbjct: 99 DLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEE 158
Query: 86 GGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G F L L L N P ++ + + R + + G N++ + F LT L+
Sbjct: 159 GLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAG-NKLPYLQHQLFCSLTELKE 217
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N L+ + F+ L L +L + N +A AF G+ L LDL LT++
Sbjct: 218 LDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLY 277
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L L+ N + S+ + L LEEL++G N L F GL L+
Sbjct: 278 EDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEV 337
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
L + + L ++ GAF + E G+ L+ L+L+ + +
Sbjct: 338 LSLNN-NQLQDIKAGAFLGLYNVAVMHLSANCIKT-LPEYVFEGVTKLHSLHLEHSCLSK 395
Query: 324 F-SESMLAWPELRTIDIAENPIECGCNILWLREM--LVRRNTSAVFCNSPAPLKYKSLIS 380
+ + + LR + + N I RE+ L+ + + +P + L +
Sbjct: 396 IRANTFSSLTSLRRLFLQHNAIST-IEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSN 454
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
L E L + + +IS N F L L L L+ N+L ++ +++L L L + N
Sbjct: 455 L--EYLFLSFNQIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNS 512
Query: 441 FSMLEAG 447
G
Sbjct: 513 LETFSVG 519
Score = 229 (85.7 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 110/438 (25%), Positives = 188/438 (42%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPI 85
+L+ L + H+ Q LV L+ N V+ + LS L +++L + +++P
Sbjct: 123 HLERNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPD 182
Query: 86 GGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
F L EL L NK + Q+ CS+ + +++ G N + I F L L+
Sbjct: 183 KVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSG-NALKGIKINIFVKLQKLQK 241
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL++NQ+ ++ +F+ + L L + N T+L + F GL L L L +T++
Sbjct: 242 LYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLR 301
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
F+ L L L L NR+ S+ + L +LE L + N ++AG F GL +
Sbjct: 302 PRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAV 361
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
+ ++ A+ + + + F + I L +L L L+ NA ++
Sbjct: 362 MHLS-ANCIKTLPEYVF-EGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAIST 419
Query: 324 FSE-SMLAWPELRTIDIAENPI-----ECGCNILWLREMLVRRNTSA-VFCNSPAPLKYK 376
+ S EL +D+ N + + + L + + N + N+ +PL+
Sbjct: 420 IEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSPLRRL 479
Query: 377 SLISLSAEDLGCAGAGLTNISDNA-FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 435
+ LS L A L DNA L+ LR L L +N L++ L LE+L
Sbjct: 480 FWLDLSHNQL----ATL----DNAVITQLANLRYLSLRNNSLETFSVGFLCPSFTLEQLW 531
Query: 436 IGQNGFSMLEAGC-FKGL 452
+G N + C KGL
Sbjct: 532 LGGNNW---HCNCSLKGL 546
Score = 229 (85.7 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 103/439 (23%), Positives = 174/439 (39%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+NR+ + F L L L++N V F L L L +G N L D F
Sbjct: 126 RNRLKYLAPHTFLHTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVF 185
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+ L L L L G L + F L+ L+ L L+ N L+ I KL +L++L +
Sbjct: 186 HDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLN 245
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
N + + F G+ L+ L+++ + LT + + F +
Sbjct: 246 NNQINAIAPRAFMGMKSLRWLDLSH-NRLTSLYEDTFLGLLSLHVLRLSTNSITS-LRPR 303
Query: 304 ALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENP---IECGCNILWLREMLVR 359
L L L L N S +E +L + + N I+ G L L + V
Sbjct: 304 TFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGA-FLGLYNVAVM 362
Query: 360 RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
++ P + ++ + L + L + L+ I N F L+ LR L L N + +
Sbjct: 363 HLSANCIKTLPEYV-FEGVTKLHS--LHLEHSCLSKIRANTFSSLTSLRRLFLQHNAIST 419
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 479
I + +L L EL++ N S L F GLS L+ L ++ + + + + F+
Sbjct: 420 IEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLS-FNQIMDISQNTFSPLRR 478
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPE--LRTIDIAENP 537
+ + + L NL +L+L+ N+ +FS L P L + + N
Sbjct: 479 LFWLDLSHNQLATL-DNAVITQLANLRYLSLRNNSLETFSVGFLC-PSFTLEQLWLGGNN 536
Query: 538 IECGCNILWLREMLVRRNT 556
C C++ LR+ +R T
Sbjct: 537 WHCNCSLKGLRDFALRHPT 555
Score = 212 (79.7 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 101/422 (23%), Positives = 173/422 (40%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N +++ A F L+ L L L +QL +V +F L L L + N LA F
Sbjct: 79 NNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFL 138
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L +L L + + + F GLS L L L N L +P K L L EL +
Sbjct: 139 HTQNLVSLSLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAG 198
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N L+ F L+ LK L+++G + L ++ F I A
Sbjct: 199 NKLPYLQHQLFCSLTELKELDLSGNA-LKGIKINIFVKLQKLQKLYLNNNQINA-IAPRA 256
Query: 305 LVGLPNLYHLNLKENAFTS-FSESMLAWPELRTIDIAENPI-----ECGCNILWLREMLV 358
+G+ +L L+L N TS + ++ L L + ++ N I ++ +L E+ +
Sbjct: 257 FMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQL 316
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
N ++ S A + L L E L L +I AF GL + + L+ N ++
Sbjct: 317 GHNR--IW--SLAERTFDGLGQL--EVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIK 370
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
++P +T+L L + + S + A F L+ L+RL + + ++ + +F +
Sbjct: 371 TLPEYVFEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNA-ISTIEDQSFRELH 429
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRT--IDIAEN 536
+ + VGL NL +L L N S++ + P R +D++ N
Sbjct: 430 ELLELDLKHNRLSHLSPQ-LFVGLSNLEYLFLSFNQIMDISQNTFS-PLRRLFWLDLSHN 487
Query: 537 PI 538
+
Sbjct: 488 QL 489
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 76/332 (22%), Positives = 133/332 (40%)
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G LT + D+ F + +++ L N +P L+ L+ L++ + + +E F
Sbjct: 57 GRNLTQLPDD-FP--TNAKAIWLDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQHAF 113
Query: 256 KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLN 315
GL L L + + L + F +EEG GL NL++LN
Sbjct: 114 HGLRSLYHLHLE-RNRLKYLAPHTFLHTQNLVSLSLNNNLFSK-VEEGLFAGLSNLWYLN 171
Query: 316 LKENAFTSFSESMLA-WPELRTIDIAENPI-----ECGCNILWLREMLVRRNTSAVFCNS 369
L N+ + + P LR + +A N + + C++ L+E+ + S N+
Sbjct: 172 LGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKEL----DLSG---NA 224
Query: 370 PAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
+K + L + L + I+ AF G+ LR L L+ NRL S+ L
Sbjct: 225 LKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGL 284
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 488
L L + N + L FK L +L+ L++ G + + + + F D
Sbjct: 285 LSLHVLRLSTNSITSLRPRTFKDLQFLEELQL-GHNRIWSLAERTF-DGLGQLEVLSLNN 342
Query: 489 XXXXIIEEDALVGLPNLYHLNLKENAFTSFSE 520
I+ A +GL N+ ++L N + E
Sbjct: 343 NQLQDIKAGAFLGLYNVAVMHLSANCIKTLPE 374
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 219 (82.2 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 93/383 (24%), Positives = 158/383 (41%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 249
+ +D R +GLT + N + +R L N++ SIP+ L L L++ +N +
Sbjct: 269 TTVDCRDSGLTYVPTNLPPSTTEIR---LEQNQISSIPSHSFKNLKNLTRLDLSKNIITE 325
Query: 250 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP 309
++ F GL L L + G +N+T ++ F + I G +P
Sbjct: 326 IQPKAFLGLHNLHTLVLYG-NNITDLKSDTF-EGLGSLQLLLLNANQLTCIRRGTFDHVP 383
Query: 310 NLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVF 366
L L+L +N S SE + L T+ +A+NP+ C CN+ WL ++ +++N TS
Sbjct: 384 KLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPLICDCNLQWLAQINLQKNIETSGAR 443
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAG--LTNISDNAF-RGLSGLR-----SLVLTDNR-L 417
C P L+ K +L C G+ ++ +D+ F + + + V + R L
Sbjct: 444 CEQPKRLRKKKFATLPPNKFKCKGSESFVSMYADSCFIDSICPTQCDCYGTTVDCNKRGL 503
Query: 418 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN--LTRVRKGAFA 475
+IPT + + +L + N S ++ + L+ LE+ SN +T + +F
Sbjct: 504 NTIPTS-IPRFAT--QLLLSGNNISTVDLN--SNIHVLENLEVLDLSNNHITFINDKSF- 557
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIA 534
+ L NL L+L N FS +R I +
Sbjct: 558 EKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKVI 617
Query: 535 ENPIECGCNILWLREMLVRRNTS 557
N + C C IL L L R N+S
Sbjct: 618 GNDLLCDCRILPLMSWL-RSNSS 639
Score = 195 (73.7 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 82/357 (22%), Positives = 142/357 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL+ +T I N F L L++L L DN++ +I + S L L++L + +N L
Sbjct: 49 LDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLP 108
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L L+++ +++T V A +E + +L
Sbjct: 109 DNVFQNNLKLTHLDLS-ENDITVV-SDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSL 166
Query: 312 YHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVR-RNTSAVFCNSP 370
L L N T+F E A R +D+ NP C C + W+R+ L + + C +P
Sbjct: 167 EVLTLNGNRLTTFEEPSNA--RFRQLDLFNNPWNCDCRLRWMRKWLEKAEGQNKTVCATP 224
Query: 371 APLKYKSLISLSAEDLGCAGAGLTNISDNAFRG-LSGL------RSLVLTDNRLQSIPTK 423
L+ S+ L + + C+G + L ++ D+ L +PT
Sbjct: 225 LNLQGSSIEILQDKFMTCSGNRKRRYKKTCETAEICPLPCTCTGTTVDCRDSGLTYVPTN 284
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
T E+ + QN S + + FK L L RL+++ + +T ++ AF
Sbjct: 285 LPPSTT---EIRLEQNQISSIPSHSFKNLKNLTRLDLS-KNIITEIQPKAFLGLHNLHTL 340
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIE 539
+ + D GL +L L L N T P+L + + +N I+
Sbjct: 341 VLYGNNITDL-KSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIK 396
Score = 180 (68.4 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 51/191 (26%), Positives = 86/191 (45%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
C +GLT + N + +R L N++ SIP+ L L L++ +N + ++
Sbjct: 273 CRDSGLTYVPTNLPPSTTEIR---LEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPK 329
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
F GL L L + G +N+T ++ F + I +P L
Sbjct: 330 AFLGLHNLHTLVLYG-NNITDLKSDTF-EGLGSLQLLLLNANQLTCIRRGTFDHVPKLSM 387
Query: 508 LNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSP 564
L+L +N S SE + L T+ +A+NP+ C CN+ WL ++ +++N TS C P
Sbjct: 388 LSLYDNDIKSISEVTFQNLTSLSTLHLAKNPLICDCNLQWLAQINLQKNIETSGARCEQP 447
Query: 565 APLKYKSLISL 575
L+ K +L
Sbjct: 448 KRLRKKKFATL 458
Score = 147 (56.8 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L+ NQ+ S+P+ SF L L L + N+ T + AF GL L L L G +T++ +
Sbjct: 294 LEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSD 353
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
F GL L+ L+L N+L I + +L L + N + F+ L+ L L
Sbjct: 354 TFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLH 413
Query: 266 I 266
+
Sbjct: 414 L 414
Score = 145 (56.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 45/181 (24%), Positives = 78/181 (43%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
+T I N F L L++L L DN++ +I + S L L++L + +N L F+
Sbjct: 56 ITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNN 115
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
L L+++ +++T V A +E + + +L L L
Sbjct: 116 LKLTHLDLS-ENDITVV-SDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNG 173
Query: 513 NAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVR-RNTSAVFCNSPAPLKYKS 571
N T+F E A R +D+ NP C C + W+R+ L + + C +P L+ S
Sbjct: 174 NRLTTFEEPSNA--RFRQLDLFNNPWNCDCRLRWMRKWLEKAEGQNKTVCATPLNLQGSS 231
Query: 572 L 572
+
Sbjct: 232 I 232
Score = 128 (50.1 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I++I F L L+ L L DNQ+ ++ SF L L +LR+ N L D F
Sbjct: 54 NEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQ 113
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
+L+ LDL +T +SD +G L L L N + + +S LE L +
Sbjct: 114 NNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNG 173
Query: 245 NGFSMLE 251
N + E
Sbjct: 174 NRLTTFE 180
Score = 127 (49.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 33/102 (32%), Positives = 48/102 (47%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYLD N + +P L L +L + N +L + F+ L RLS L + L +
Sbjct: 709 LYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQ 768
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
AF GL+ LR L L N + +P S LT + + +G N
Sbjct: 769 PLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSN 810
Score = 121 (47.7 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 40/151 (26%), Positives = 67/151 (44%)
Query: 73 VDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
VD + +P P + L+ N P ++ + R+++ +N I+ I
Sbjct: 271 VDCRDSGLTYVPTN-LPPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDL-SKNIITEIQP 328
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
F GL L L L N + + + +F LG L L + N T + G F+ + +LS L
Sbjct: 329 KAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSML 388
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L + +IS+ F+ L+ L +L L N L
Sbjct: 389 SLYDNDIKSISEVTFQNLTSLSTLHLAKNPL 419
Score = 115 (45.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 66/311 (21%), Positives = 117/311 (37%)
Query: 167 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 226
E+R+ N +++ +F L L+ LDL +T I AF GL L +LVL N + +
Sbjct: 291 EIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDL 350
Query: 227 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 286
+ L L+ L + N + + G F + L L + +++ + + F +
Sbjct: 351 KSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYD-NDIKSISEVTFQNLTSL 409
Query: 287 XXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS--ESMLAWPELRTIDIAENPI 344
L L +NL++N TS + E + + + N
Sbjct: 410 STLHLAKNPLICDCN------LQWLAQINLQKNIETSGARCEQPKRLRKKKFATLPPNKF 463
Query: 345 EC------------GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAG 392
+C C I + + V CN + I A L +G
Sbjct: 464 KCKGSESFVSMYADSCFIDSICPTQCDCYGTTVDCNKRGLNTIPTSIPRFATQLLLSGNN 523
Query: 393 LTNISDNA-FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
++ + N+ L L L L++N + I K KL++L EL + N +
Sbjct: 524 ISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDE 583
Query: 452 LSYLKRLEITG 462
S L+ L+++G
Sbjct: 584 QSNLEILDLSG 594
Score = 113 (44.8 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 151 LRSVPT--PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
L ++PT P F +L+ G N+ T + + L L LDL +T I+D +F
Sbjct: 503 LNTIPTSIPRFATQLLLS----GNNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFE 558
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
LS LR L L DN+L + L + + LE L++ N + F + ++ +++ G
Sbjct: 559 KLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKVIG 618
Score = 109 (43.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 40/127 (31%), Positives = 60/127 (47%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD--SAIPIYLSLQHVDLSHTTWLIIPIG 86
CN + L+ IP+ +L+LS N I TVD S I + +L+ +DLS+ I
Sbjct: 498 CN--KRGLNTIPTSIPRFATQLLLSGNNISTVDLNSNIHVLENLEVLDLSNNHITFINDK 555
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
FE KL EL+LN NK HF ++ + +++ G N I F T +R +
Sbjct: 556 SFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDLSGNN-IQCFSSIFFNKATRIREI 614
Query: 145 YLDDNQL 151
+ N L
Sbjct: 615 KVIGNDL 621
Score = 93 (37.8 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F+ L L AL L + I + +F L L+ L L+ NR++ +P
Sbjct: 54 NEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQ 113
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+L L++ +N +++ +G +L+ L +
Sbjct: 114 NNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNL 147
Score = 93 (37.8 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 31/112 (27%), Positives = 51/112 (45%)
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 424
V C++ + S I +L + I + L L L L+ NRL S+
Sbjct: 688 VRCSNKNLTSFPSRIPFDTTELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNT 747
Query: 425 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 476
S LTRL L I N L+ F GL+ L+ L + G ++++ + + AF++
Sbjct: 748 FSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHG-NDISFLPQSAFSN 798
Score = 87 (35.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L L L L+ NRL S+ S LTRL L I N L+ F GL+ L+ L + G
Sbjct: 727 LYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHG- 785
Query: 270 SNLTRVRKGAFAD 282
++++ + + AF++
Sbjct: 786 NDISFLPQSAFSN 798
Score = 86 (35.3 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 34/150 (22%), Positives = 62/150 (41%)
Query: 90 PQEKL-VELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDD 148
P + + ++LQ N S+++ + +++ N+I I F L L+ L L
Sbjct: 43 PNDTIRLDLQDNEITKIGPNDFSSLMNLKALQLM-DNQIVTIHNQSFSSLVFLQKLRLSR 101
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
N++R +P F L L + N T ++D G L L+L + + +N
Sbjct: 102 NRIRHLPDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVIS 161
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
L L L NRL + ++ +L+
Sbjct: 162 SWVSLEVLTLNGNRLTTFEEPSNARFRQLD 191
Score = 77 (32.2 bits), Expect = 3.7e-12, Sum P(3) = 3.7e-12
Identities = 23/89 (25%), Positives = 45/89 (50%)
Query: 378 LISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 437
L SL+ DL + L ++ +N F L+ L +L+++ N+L+ + + L L L +
Sbjct: 727 LYSLTKLDL--SHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLH 784
Query: 438 QNGFSMLEAGCFKGLSYLKRLEITGASNL 466
N S L F L+ + + + G+++L
Sbjct: 785 GNDISFLPQSAFSNLTSITHIAV-GSNSL 812
Score = 76 (31.8 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 27/100 (27%), Positives = 41/100 (41%)
Query: 125 NRISRID-QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS +D + L L +L L +N + + SF L L ELR+ N +
Sbjct: 522 NNISTVDLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVL 581
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
+ L LDL G + S F + +R + + N L
Sbjct: 582 DEQSNLEILDLSGNNIQCFSSIFFNKATRIREIKVIGNDL 621
Score = 75 (31.5 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 47 IQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
+Q+L LS NRI+ + D+ L L H+DLS ++ + E L L L+ N F
Sbjct: 94 LQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIF 153
Query: 106 --PQQIVCSIISPRRVEIFGQNRISRIDQ 132
++ S +S + + G NR++ ++
Sbjct: 154 CLENNVISSWVSLEVLTLNG-NRLTTFEE 181
Score = 75 (31.5 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 32/144 (22%), Positives = 63/144 (43%)
Query: 32 QEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEP 90
+++ L +P++ PS + L N+I ++ S + +L +DLS I F
Sbjct: 274 RDSGLTYVPTNLPPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLG 333
Query: 91 QEKLVELQLNHNKHFP-QQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
L L L N + + ++ + N+++ I + F+ + L +L L DN
Sbjct: 334 LHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDN 393
Query: 150 QLRSVPTPSFIYLGMLAELRVGLN 173
++S+ +F L L+ L + N
Sbjct: 394 DIKSISEVTFQNLTSLSTLHLAKN 417
Score = 71 (30.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 26/116 (22%), Positives = 47/116 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
L L N + IP L++L L +L++ N LE F L+ L L I + L +
Sbjct: 709 LYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTL-IISYNKLRCL 767
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW 331
+ AF + + + A L ++ H+ + N+ + + +AW
Sbjct: 768 QPLAF-NGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVGSNSL--YCDCNMAW 820
Score = 63 (27.2 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 34/141 (24%), Positives = 57/141 (40%)
Query: 17 YEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQ---RLVLSTNRIKTVDSAIPIYLSLQHV 73
Y P+ L++ + IPSHS +++ RL LS N I + + L H
Sbjct: 280 YVPTNLPPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHT 339
Query: 74 DLSHTTWLI-IPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRI 130
+ + + + FE L L LN N+ + + + ++ N I I
Sbjct: 340 LVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLY-DNDIKSI 398
Query: 131 DQACFEGLTALRILYLDDNQL 151
+ F+ LT+L L+L N L
Sbjct: 399 SEVTFQNLTSLSTLHLAKNPL 419
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 263 (97.6 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 93/364 (25%), Positives = 161/364 (44%)
Query: 36 LDVIPSHSNP--SIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEP-QE 92
++++P H S++ L LS+N I + +A P L L+++ L+ + G F+
Sbjct: 134 VEILPEHLKEFQSLETLDLSSNNISELQTAFPA-LQLKYLYLNSNRVTSMEPGYFDNLAN 192
Query: 93 KLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQ 150
L+ L+LN N+ P ++ + + +E+ +N+I +D F+GL AL+ L + N
Sbjct: 193 TLLVLKLNRNRISAIPPKMF-KLPQLQHLEL-NRNKIKNVDGLTFQGLGALKSLKMQRNG 250
Query: 151 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGL 210
+ + +F L + L++ N T + G GL L L L + IS +A+
Sbjct: 251 VTKLMDGAFWGLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFC 310
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
L L LT N L + L+ L L IG N S + F+GLS LK L++
Sbjct: 311 QKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNE 370
Query: 271 NLTRVR--KGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM 328
+ GAF+ I + A GL L HL+L +NA S +
Sbjct: 371 ISWTIEDMNGAFSGLDKLRRLILQGNRIRS-ITKKAFTGLDALEHLDLSDNAIMSLQGNA 429
Query: 329 LA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF---CNSPAPLKYKSLISLSAE 384
+ +L+ + + + + C C + WL + + N + C P LK +S+ ++S +
Sbjct: 430 FSQMKKLQQLHLNTSSLLCDCQLKWLPQWVAENNFQSFVNASCAHPQLLKGRSIFAVSPD 489
Query: 385 DLGC 388
C
Sbjct: 490 GFVC 493
Score = 228 (85.3 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 100/357 (28%), Positives = 160/357 (44%)
Query: 23 STRDPSCNLQEANLDVIPSHS--NPSIQRLVLSTNRI-KTVDSAIPIYLSLQHVDLSHTT 79
S R+ N E L+ IP+ + +I L L+ NRI + + + + SL+ +DLS
Sbjct: 99 SLREVKLNNNE--LETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNN 156
Query: 80 WLIIPIGGFEPQEKLVELQLNHNKHFPQQ--IVCSIISPRRVEIFGQNRISRIDQACFEG 137
I + P +L L LN N+ + ++ + V +NRIS I F+
Sbjct: 157 --ISELQTAFPALQLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFK- 213
Query: 138 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 197
L L+ L L+ N++++V +F LG L L++ N T L DGAF GL + L L
Sbjct: 214 LPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHN 273
Query: 198 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 257
LT I+ GL L+ L L+ N + I +L EL++ N S L+ F G
Sbjct: 274 NLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLG 333
Query: 258 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE--GALVGLPNLYHLN 315
LS L L I G + ++ + AF IE+ GA GL L L
Sbjct: 334 LSLLNTLHI-GNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLI 392
Query: 316 LKENAFTSFSESMLAWPE-LRTIDIAENPIEC--GCNILWLREML-VRRNTSAVFCN 368
L+ N S ++ + L +D+++N I G ++++ + NTS++ C+
Sbjct: 393 LQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLLCD 449
Score = 216 (81.1 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 107/391 (27%), Positives = 168/391 (42%)
Query: 89 EPQEKLV-ELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA-LRIL 144
EP V L L+HN+ + + S R V++ N + I ++A + +L
Sbjct: 70 EPLPSWVARLDLSHNRLSFIKASSMSHLQSLREVKL-NNNELETIPN--LGPVSANITLL 126
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L N++ + L L + N + L AF L +L L L +T++
Sbjct: 127 SLAGNRIVEILPEHLKEFQSLETLDLSSNNISELQT-AFPAL-QLKYLYLNSNRVTSMEP 184
Query: 205 NAFRGLSG-LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
F L+ L L L NR+ +IP K KL +L+ LE+ +N ++ F+GL LK
Sbjct: 185 GYFDNLANTLLVLKLNRNRISAIPPKMF-KLPQLQHLELNRNKIKNVDGLTFQGLGALKS 243
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
L++ + +T++ GAF I +G L GL L L+L +NA
Sbjct: 244 LKMQ-RNGVTKLMDGAFWGLSNMEILQLDHNNLTE-ITKGWLYGLLMLQELHLSQNAINR 301
Query: 324 FSESMLAWP---ELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP---APLKYKS 377
S AW +L +D+ N + + +L L+ NT + N A ++
Sbjct: 302 ISPD--AWEFCQKLSELDLTFNHLSRLDDSSFLGLSLL--NTLHIGNNRVSYIADCAFRG 357
Query: 378 LISLSAEDLGCAGAGLTNISD--NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 435
L SL DL T I D AF GL LR L+L NR++SI K + L LE L+
Sbjct: 358 LSSLKTLDLKNNEISWT-IEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLD 416
Query: 436 IGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
+ N L+ F + L++L + +S L
Sbjct: 417 LSDNAIMSLQGNAFSQMKKLQQLHLNTSSLL 447
Score = 186 (70.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 95/398 (23%), Positives = 164/398 (41%)
Query: 53 STNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCS 112
S R+ + +P +++ +DLSH I + L E++LN+N+ +
Sbjct: 61 SRKRLARLPEPLPSWVA--RLDLSHNRLSFIKASSMSHLQSLREVKLNNNELETIPNLGP 118
Query: 113 IISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 172
+ + + NRI I + +L L L N + + T +F L L L +
Sbjct: 119 VSANITLLSLAGNRIVEILPEHLKEFQSLETLDLSSNNISELQT-AFPAL-QLKYLYLNS 176
Query: 173 NVFTTLADGAFNGLGR-LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 231
N T++ G F+ L L L L ++ I F+ L L+ L L N+++++
Sbjct: 177 NRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFK-LPQLQHLELNRNKIKNVDGLTF 235
Query: 232 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 291
L L+ L++ +NG + L G F GLS ++ L++ +NLT + KG +
Sbjct: 236 QGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDH-NNLTEITKG-WLYGLLMLQELH 293
Query: 292 XXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES-MLAWPELRTIDIAENPI----EC 346
I A L L+L N + +S L L T+ I N + +C
Sbjct: 294 LSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADC 353
Query: 347 GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
L + L +N + + L L L G + +I+ AF GL
Sbjct: 354 AFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRR--LILQGNRIRSITKKAFTGLDA 411
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L L L+DN + S+ S++ +L++L + N S+L
Sbjct: 412 LEHLDLSDNAIMSLQGNAFSQMKKLQQLHL--NTSSLL 447
Score = 153 (58.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 51/204 (25%), Positives = 86/204 (42%)
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
L ++L + + IS +A+ L L LT N L + L+ L L IG N
Sbjct: 287 LMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNR 346
Query: 441 FSMLEAGCFKGLSYLKRLEITGASNLTRVR--KGAFADXXXXXXXXXXXXXXXXIIEEDA 498
S + F+GLS LK L++ + GAF+ I ++ A
Sbjct: 347 VSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKK-A 405
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
GL L HL+L +NA S + + +L+ + + + + C C + WL + + N
Sbjct: 406 FTGLDALEHLDLSDNAIMSLQGNAFSQMKKLQQLHLNTSSLLCDCQLKWLPQWVAENNFQ 465
Query: 558 AVF---CNSPAPLKYKSLISLSAE 578
+ C P LK +S+ ++S +
Sbjct: 466 SFVNASCAHPQLLKGRSIFAVSPD 489
Score = 37 (18.1 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNG-FSMLEAGCFKGLSYLKRLEIT 461
R Q + + + RL E+E G + + + F G SY + ++T
Sbjct: 553 RAQGGEVMEYTTILRLREVEFASEGKYQCVISNHF-GSSYSVKAKLT 598
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 251 (93.4 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 108/412 (26%), Positives = 169/412 (41%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIG 86
S + E L V+P+ +P L LS N + + + +L L+ + LS IP
Sbjct: 49 SADCSELGLSVVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQ 108
Query: 87 GFEPQE--KLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F K++ LQ N + P + + + S + + + N IS + + FEGL++LR L
Sbjct: 109 AFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRL-DANLISLVPERSFEGLSSLRHL 167
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
+LDDN L +P + L L + + LN + D AF L L L L + ++
Sbjct: 168 WLDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGT 227
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
++F GL L +L L N LQ P + L RL+EL N + F G L+ +
Sbjct: 228 HSFEGLHNLETLDLNYNELQEFPLA-IRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTI 286
Query: 265 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF 324
+ + V + AF + L G +L L L
Sbjct: 287 HFYD-NPIQFVGRSAFQYLSKLHTLSLNGATDIQEFPD--LKGTTSLEILTLTRAGIRLL 343
Query: 325 SESMLAW-PELRTIDIAENPIECGCNI---LWLREMLVRRNTSAVFCNSPAPLKYKSLIS 380
+ P LR ++++ N IE ++ L E+ +R N + L S
Sbjct: 344 PPGVCQQLPRLRILELSHNQIEELPSLHRCQKLEEIGLRHNR----IKEIGADTFSQLGS 399
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
L A DL + + I AF L L L LTDN+L ++P L L L+
Sbjct: 400 LQALDL--SWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLPLAGLGGLMHLK 449
Score = 209 (78.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 98/413 (23%), Positives = 170/413 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F L L L L N L +P +F L L L + N + A
Sbjct: 76 NNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLHSLKILMLQSNQLRGIPAEALW 135
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L +L L ++ + + +F GLS LR L L DN L IP + L+ L L+ + +
Sbjct: 136 ELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLAL 195
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + F+ L+ L L + + + V +F A
Sbjct: 196 NHIRHIPDYAFQNLTSLVVLHLHN-NRIQHVGTHSFEGLHNLETLDLNYNELQEF--PLA 252
Query: 305 LVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRNT 362
+ L L L N + E + + P L+TI +NPI+ G + + L + +T
Sbjct: 253 IRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQTIHFYDNPIQFVGRSAF---QYLSKLHT 309
Query: 363 SAVFCNSPAPLK-YKSLI-SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
++ N ++ + L + S E L AG+ + + L LR L L+ N+++ +
Sbjct: 310 LSL--NGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGVCQQLPRLRILELSHNQIEEL 367
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 480
P+ L + +LEE+ + N + A F L L+ L+++ + + + AF+
Sbjct: 368 PS--LHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQALDLSWNA-IRAIHPEAFSTLRSL 424
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDI 533
+ L GL L HL LK N S + S ++P+LR +++
Sbjct: 425 VKLDLTDNQLTTL----PLAGLGGLMHLKLKGNLALSQAFSKDSFPKLRILEV 473
Score = 202 (76.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 95/399 (23%), Positives = 153/399 (38%)
Query: 74 DLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
D S ++P +P ++L +N+ + + + + G N +S I
Sbjct: 51 DCSELGLSVVP-ADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSG-NHLSHIPGQ 108
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F GL +L+IL L NQLR +P + L L LR+ N+ + + + +F GL L L
Sbjct: 109 AFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLW 168
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
L LT I A L L+++ L N ++ IP LT L L + N +
Sbjct: 169 LDDNALTEIPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTH 228
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFA-DXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
F+GL L+ L++ N +++ A I E A +G P L
Sbjct: 229 SFEGLHNLETLDL----NYNELQEFPLAIRTLGRLQELGFHNNNIKAIPEKAFMGSPLLQ 284
Query: 313 HLNLKENAFTSFSESMLAW-PELRTI------DIAENPIECGCN---ILWLREMLVRRNT 362
++ +N S + +L T+ DI E P G IL L +R
Sbjct: 285 TIHFYDNPIQFVGRSAFQYLSKLHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLP 344
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
V C L+ L E+L + L + L NR++ I
Sbjct: 345 PGV-CQQLPRLRILELSHNQIEELP------------SLHRCQKLEEIGLRHNRIKEIGA 391
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
S+L L+ L++ N + F L L +L++T
Sbjct: 392 DTFSQLGSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLT 430
>UNIPROTKB|F1MSM8 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:DAAA02033778 IPI:IPI00713179 RefSeq:XP_001249506.1
RefSeq:XP_002691956.1 UniGene:Bt.87936 Ensembl:ENSBTAT00000005757
GeneID:781119 KEGG:bta:781119 NextBio:20924630 Uniprot:F1MSM8
Length = 842
Score = 167 (63.8 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 63/245 (25%), Positives = 106/245 (43%)
Query: 343 PIECGCNILWLREMLVR---RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
PI C C +L +L+ RN ++ P P + LI AG + + +
Sbjct: 332 PIPCNCKVLSPSGLLIHCQERNIESLSDLKPPPQNPRKLI--------LAGNIIHTLLKS 383
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
L L L +NR++ + LTRL++L + N + L G F GL L+ L
Sbjct: 384 DLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLY 443
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+ + + + G F + ++ G+P L +NLK N FT
Sbjct: 444 LE-YNGVKEILPGTF-NPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLP 500
Query: 520 ES-MLAWPELRT-IDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLI 573
S +L +L T ID+ +NP +C C+++ W++++ T + C SP L K L
Sbjct: 501 VSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDEILCTSPEHLHKKELK 560
Query: 574 SLSAE 578
+L++E
Sbjct: 561 ALNSE 565
Score = 155 (59.6 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 52/184 (28%), Positives = 85/184 (46%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L L L +NR++ + LTRL++L + N + L G F GL L+ L + + +
Sbjct: 391 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLE-YNGV 449
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES-MLAW 331
+ G F + + G+P L +NLK N FT S +L
Sbjct: 450 KEILPGTF-NPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILDD 507
Query: 332 PELRT-IDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
+L T ID+ +NP +C C+++ W++++ T + C SP L K L +L++E L
Sbjct: 508 LDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDEILCTSPEHLHKKELKALNSELL 567
Query: 387 GCAG 390
C G
Sbjct: 568 -CPG 570
Score = 135 (52.6 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 35/116 (30%), Positives = 57/116 (49%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F GLT ++L N + + T +F LG+L +L + N L + F+GL L L
Sbjct: 86 FSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQA 145
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
+T I +AF L+ L+ L+L DN ++S+P + + L L++ N L
Sbjct: 146 DNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRGNQLQTL 200
Score = 129 (50.5 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 38/125 (30%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L +N L + T F L + +G N + GAFNGLG L L + L +
Sbjct: 71 LSLLNNGLTVLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 130
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L +N + I SKL RL+ L + N L F+ + L
Sbjct: 131 EDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTH 189
Query: 264 LEITG 268
L++ G
Sbjct: 190 LDLRG 194
Score = 127 (49.8 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N I+ I+ F GL L+ L+++ N L + +F L L L+ N T + A
Sbjct: 98 GFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSA 157
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
F+ L RL L L + ++ N FR + L L L N+LQ++P L + R+ +L+
Sbjct: 158 FSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEHIGRILDLQ 216
Query: 242 IGQN 245
+ N
Sbjct: 217 LEDN 220
Score = 125 (49.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 52/204 (25%), Positives = 81/204 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L GLT + N F GL+ S+ L N + I T + L L++L I N +L+
Sbjct: 71 LSLLNNGLTVLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 130
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L+ + +T + AF+ + +P L
Sbjct: 131 EDTFHGLENLEFLQADN-NFITVIEPSAFSKLNRLKVLILNDNAIES-LPPNIFRFVP-L 187
Query: 312 YHLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRNT 362
HL+L+ N + F E + + + + +N C C++L WL M +
Sbjct: 188 THLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCDLLQLKLWLENMPPQSVI 244
Query: 363 SAVFCNSPAPLKYKSLISLSAEDL 386
V CNSP K L L E +
Sbjct: 245 GDVVCNSPPFFKGSILSRLKKESI 268
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 53/205 (25%), Positives = 86/205 (41%)
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
GLT + N F GL+ S+ L N + I T + L L++L I N +L+ F G
Sbjct: 77 GLTVLHTNDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHG 136
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLP-NLY---- 506
L L+ L+ + +T + AF+ I+ ++A+ LP N++
Sbjct: 137 LENLEFLQADN-NFITVIEPSAFSKLNRLKVL---------ILNDNAIESLPPNIFRFVP 186
Query: 507 --HLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRN 555
HL+L+ N + F E + + + + +N C C++L WL M +
Sbjct: 187 LTHLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCDLLQLKLWLENMPPQSV 243
Query: 556 TSAVFCNSPAPLKYKSLISLSAEDL 580
V CNSP K L L E +
Sbjct: 244 IGDVVCNSPPFFKGSILSRLKKESI 268
Score = 112 (44.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI +++ F LT L+ LYL+ N L + F+ L L L + N + G
Sbjct: 397 GNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGT 456
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
FN + +L L L L + + F G+ L + L N+ +P L L L +++
Sbjct: 457 FNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILDDLDLLTQID 515
Query: 242 IGQN 245
+ N
Sbjct: 516 LEDN 519
Score = 112 (44.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 43/157 (27%), Positives = 66/157 (42%)
Query: 111 CSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
C ++SP + I Q R I + R L L N + ++ + L L
Sbjct: 337 CKVLSPSGLLIHCQERNIESLSDLKPPPQNP-RKLILAGNIIHTLLKSDLVEYFTLEMLH 395
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+G N L +G+F L RL L L G LT +S F GL L L L N ++ I
Sbjct: 396 LGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPG 455
Query: 230 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ + +L+ L + N +L F G+ L R+ +
Sbjct: 456 TFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINL 491
Score = 98 (39.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 424
++C P P K ++S S + C + ++SD R L+L N + ++
Sbjct: 329 LYC--PIPCNCK-VLSPSGLLIHCQERNIESLSDLK-PPPQNPRKLILAGNIIHTLLKSD 384
Query: 425 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L + LE L +G N +LE G F L+ L++L + G ++LT++ G F
Sbjct: 385 LVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLTKLSGGMF 433
Score = 93 (37.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L+L N + ++ L + LE L +G N +LE G F L+ L++L + G ++LT
Sbjct: 368 RKLILAGNIIHTLLKSDLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLT 426
Query: 274 RVRKGAF 280
++ G F
Sbjct: 427 KLSGGMF 433
Score = 89 (36.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 39/146 (26%), Positives = 61/146 (41%)
Query: 51 VLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQI 109
VL TN + +AI I+L ++ I G F L +L +NHN ++
Sbjct: 80 VLHTNDFSGLTNAISIHLGFNNI-------ADIETGAFNGLGLLKQLHINHNSLEILKED 132
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
+ N I+ I+ + F L L++L L+DN + S+P P+ L L
Sbjct: 133 TFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLP-PNIFRFVPLTHLD 191
Query: 170 VGLNVFTTLAD-GAFNGLGRLSALDL 194
+ N TL G +GR+ L L
Sbjct: 192 LRGNQLQTLPYVGFLEHIGRILDLQL 217
Score = 68 (29.0 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGF-EPQEKLVELQLNHNK 103
L+L+ N I+++ I ++ L H+DL +P GF E ++++LQL NK
Sbjct: 167 LILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 221
>UNIPROTKB|F1ND28 [details] [associations]
symbol:TLR21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043408 "regulation of MAPK cascade"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0004888 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 EMBL:AADN02065737 IPI:IPI00590323
Ensembl:ENSGALT00000001120 OMA:NSADESW ArrayExpress:F1ND28
Uniprot:F1ND28
Length = 972
Score = 197 (74.4 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 110/413 (26%), Positives = 175/413 (42%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N++R + +F +L L L + N+ TL+ GAFNGLG L LDL LT ++
Sbjct: 78 LNLSYNKMRCLQPSAFAHLTQLHTLDLTYNLLETLSPGAFNGLGVLVVLDLSHNKLTTLA 137
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI--GQ-NGFSMLEAGCFKGLSY 260
+ F L L SL + N L ++ L L L L + G+ NG + A +GL+
Sbjct: 138 EGVFNSLGNLSSLQVQHNPLSTVSPSALLPLVNLRRLSLRGGRLNGLGAV-AAAVQGLAQ 196
Query: 261 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN-LYHLNLKEN 319
L+ L++ +NLT + G + E A G P+ L+H+ + +
Sbjct: 197 LELLDLC-ENNLTTLGPGP-----PLPASLLTLQLCNNSLRELA-GGSPDMLWHVKILDL 249
Query: 320 AFTSFSES-MLAWPELRTIDIAE---NPIECGCNILWLREMLVRR-NTSAVFCNSPAPLK 374
++ S S++ + LR I + NP++ ++L + ++ R + S + + K
Sbjct: 250 SYNSISQAEVFTQLHLRNISLLHLIGNPLDV-FHLLDISDIQPRSLDFSGLVLGAQGLDK 308
Query: 375 YKSLIS--LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT--KQLSKLTR 430
+ + L GL + NA + LR L L+ NRLQ + + L K R
Sbjct: 309 VCLRLQGPQALRRLQLQRNGLKVLHCNALQLCPVLRELDLSWNRLQHVGCAGRLLGKKQR 368
Query: 431 --LEELEIGQNGFSMLEAGCFKGLSYLKRL-EITGASN-LTRVRKGAFADXXXXXXXXXX 486
LE L + N L + C G L RL I+ N + V AFA
Sbjct: 369 EKLEVLTVEHNLLKKLPS-CL-GAQVLPRLYNISFRFNRILTVGPQAFA-YAPALQVLWL 425
Query: 487 XXXXXXIIEEDALVGLPNLYHLNLKENAFTS-FSESMLAWPELRTIDIAENPI 538
++ AL L NL L L N T + S + LRT+++ N +
Sbjct: 426 NINSLVWLDRQALWRLHNLTELRLDNNLLTDLYHNSFIDLHRLRTLNLRNNRV 478
Score = 192 (72.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 101/400 (25%), Positives = 181/400 (45%)
Query: 46 SIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGF----EPQEKLVELQLN 100
+++RL L N +K + +A+ + L+ +DLS + G + +EKL L +
Sbjct: 318 ALRRLQLQRNGLKVLHCNALQLCPVLRELDLSWNRLQHVGCAGRLLGKKQREKLEVLTVE 377
Query: 101 HN--KHFPQQIVCSIISPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTP 157
HN K P + ++ PR I F NRI + F AL++L+L+ N L +
Sbjct: 378 HNLLKKLPSCLGAQVL-PRLYNISFRFNRILTVGPQAFAYAPALQVLWLNINSLVWLDRQ 436
Query: 158 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLV 217
+ L L ELR+ N+ T L +F L RL L+LR ++ + F+GL+ L++L
Sbjct: 437 ALWRLHNLTELRLDNNLLTDLYHNSFIDLHRLRTLNLRNNRVSVLFSGVFQGLAELQTLD 496
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL-SYLKRLEITGASNLTRVR 276
L N L+ + + L L +L L + +N + + F + + L L++ A+NL +
Sbjct: 497 LGGNNLRHLTAQSLQGLPKLRRLYLDRNRLLEVSSTVFAPVQATLGVLDLR-ANNLQYIS 555
Query: 277 KGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRT 336
+ G L LP+ + L S S++ML R+
Sbjct: 556 QWLRKPPPFRNLSSLYDLKLQAQQPYG-LKMLPHYFFQGLVRLQQLSLSQNML-----RS 609
Query: 337 IDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
I P + ++ LR + + +++ + + P + +++L +L DL AGL ++
Sbjct: 610 I-----PPDVFEDLGQLRSLALADSSNGLH-DLPDGI-FRNLGNLRFLDL--ENAGLHSL 660
Query: 397 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
+ F LS L+ L L N L++ S+L+ L L++
Sbjct: 661 TLEVFGNLSRLQVLHLARNELKTFNDSVASRLSSLRYLDL 700
Score = 158 (60.7 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 46/148 (31%), Positives = 73/148 (49%)
Query: 109 IVCSIISPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 167
+ S + P + + N++ + + F LT L L L N L ++ +F LG+L
Sbjct: 66 LAVSDLPPHAIALNLSYNKMRCLQPSAFAHLTQLHTLDLTYNLLETLSPGAFNGLGVLVV 125
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N TTLA+G FN LG LS+L ++ L+ +S +A L LR L L RL +
Sbjct: 126 LDLSHNKLTTLAEGVFNSLGNLSSLQVQHNPLSTVSPSALLPLVNLRRLSLRGGRLNGLG 185
Query: 228 T--KQLSKLTRLEELEIGQNGFSMLEAG 253
+ L +LE L++ +N + L G
Sbjct: 186 AVAAAVQGLAQLELLDLCENNLTTLGPG 213
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 65/208 (31%), Positives = 91/208 (43%)
Query: 45 PSIQRLVLSTNRIKTVDSAI--PIYLSLQHVDLSHTT------WLIIPIGGFEPQEKLVE 96
P ++RL L NR+ V S + P+ +L +DL WL P F L +
Sbjct: 514 PKLRRLYLDRNRLLEVSSTVFAPVQATLGVLDLRANNLQYISQWLRKP-PPFRNLSSLYD 572
Query: 97 LQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 156
L+L QQ P +G + + F+GL L+ L L N LRS+P
Sbjct: 573 LKLQ-----AQQ-------P-----YG---LKMLPHYFFQGLVRLQQLSLSQNMLRSIPP 612
Query: 157 PSFIYLGMLAELRVG--LNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLR 214
F LG L L + N L DG F LG L LDL AGL +++ F LS L+
Sbjct: 613 DVFEDLGQLRSLALADSSNGLHDLPDGIFRNLGNLRFLDLENAGLHSLTLEVFGNLSRLQ 672
Query: 215 SLVLTDNRLQSIPTKQLSKLTRLEELEI 242
L L N L++ S+L+ L L++
Sbjct: 673 VLHLARNELKTFNDSVASRLSSLRYLDL 700
Score = 146 (56.5 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 69/273 (25%), Positives = 111/273 (40%)
Query: 304 ALVGLPNLYHLNLKENAFTS-FSESMLAWPELRTIDIAENPIE-CGCNILW----LREML 357
+ + L L LNL+ N + FS EL+T+D+ N + L LR +
Sbjct: 461 SFIDLHRLRTLNLRNNRVSVLFSGVFQGLAELQTLDLGGNNLRHLTAQSLQGLPKLRRLY 520
Query: 358 VRRN-----TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVL 412
+ RN +S VF A L ++ L A +L L FR LS L L L
Sbjct: 521 LDRNRLLEVSSTVFAPVQATL---GVLDLRANNLQYISQWLRK--PPPFRNLSSLYDLKL 575
Query: 413 TDNR---LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN-LTR 468
+ L+ +P L RL++L + QN + F+ L L+ L + +SN L
Sbjct: 576 QAQQPYGLKMLPHYFFQGLVRLQQLSLSQNMLRSIPPDVFEDLGQLRSLALADSSNGLHD 635
Query: 469 VRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPE 527
+ G F + + E L L L+L N +F++S+ +
Sbjct: 636 LPDGIFRNLGNLRFLDLENAGLHSLTLE-VFGNLSRLQVLHLARNELKTFNDSVASRLSS 694
Query: 528 LRTIDIAENPIECGCNILWLREMLVRRNTSAVF 560
LR +D+ + P+ C C+ +WL+ L V+
Sbjct: 695 LRYLDLRKCPLSCTCDNMWLQGWLNNSRVQVVY 727
Score = 145 (56.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 75/312 (24%), Positives = 129/312 (41%)
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
N++ +V +F Y L L + +N L A L L+ L L LT++ N+F
Sbjct: 404 NRILTVGPQAFAYAPALQVLWLNINSLVWLDRQALWRLHNLTELRLDNNLLTDLYHNSFI 463
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
L LR+L L +NR+ + + L L+ L++G N L A +GL L+RL +
Sbjct: 464 DLHRLRTLNLRNNRVSVLFSGVFQGLAELQTLDLGGNNLRHLTAQSLQGLPKLRRLYLD- 522
Query: 269 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM 328
+ L V FA I + + P + NL +S +
Sbjct: 523 RNRLLEVSSTVFAPVQATLGVLDLRANNLQYISQW--LRKPPPFR-NL-----SSLYDLK 574
Query: 329 LAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
L + + + + G ++ L+++ + +N S P ++ L L + L
Sbjct: 575 LQAQQPYGLKMLPHYFFQG--LVRLQQLSLSQN----MLRSIPPDVFEDLGQLRSLALAD 628
Query: 389 AGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
+ GL ++ D FR L LR L L + L S+ + L+RL+ L + +N
Sbjct: 629 SSNGLHDLPDGIFRNLGNLRFLDLENAGLHSLTLEVFGNLSRLQVLHLARNELKTFNDSV 688
Query: 449 FKGLSYLKRLEI 460
LS L+ L++
Sbjct: 689 ASRLSSLRYLDL 700
Score = 92 (37.4 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
LT++ N+F L LR+L L +NR+ + + L L+ L++G N L A +GL
Sbjct: 454 LTDLYHNSFIDLHRLRTLNLRNNRVSVLFSGVFQGLAELQTLDLGGNNLRHLTAQSLQGL 513
Query: 453 SYLKRLEITGASNLTRVRKGAFA 475
L+RL + + L V FA
Sbjct: 514 PKLRRLYLD-RNRLLEVSSTVFA 535
Score = 77 (32.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 404 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 463
L L L L +N L + L RL L + N S+L +G F+GL+ L+ L++ G
Sbjct: 441 LHNLTELRLDNNLLTDLYHNSFIDLHRLRTLNLRNNRVSVLFSGVFQGLAELQTLDL-GG 499
Query: 464 SNL 466
+NL
Sbjct: 500 NNL 502
Score = 68 (29.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 37/143 (25%), Positives = 64/143 (44%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQH-VDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P L LS N+++ + + +L+ H +DL++ + G F LV L L+HNK
Sbjct: 73 PHAIALNLSYNKMRCLQPSAFAHLTQLHTLDLTYNLLETLSPGAFNGLGVLVVLDLSHNK 132
Query: 104 --HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ + S+ + +++ N +S + + L LR L L +L + +
Sbjct: 133 LTTLAEGVFNSLGNLSSLQV-QHNPLSTVSPSALLPLVNLRRLSLRGGRLNGLGAVAAAV 191
Query: 162 LGMLAELRV-GL--NVFTTLADG 181
G LA+L + L N TTL G
Sbjct: 192 QG-LAQLELLDLCENNLTTLGPG 213
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 225 (84.3 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 95/423 (22%), Positives = 165/423 (39%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ N + GAF+ +L +DL ++ + +AF+GL L SLVL N++
Sbjct: 195 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT 254
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 284
+P L L+ L + N + L F+ L L L + + L + KG F+
Sbjct: 255 ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-NKLQTIAKGTFSPLR 313
Query: 285 XXXXXXXXXXXXXXXIEEGALVGLPNLYHLN-LKENAFTSFSESMLAWPELRTIDIAENP 343
I + L L + H N ++ + S LA R I
Sbjct: 314 AIQTLYERHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLA--NKRIGQIKSKK 371
Query: 344 IECGCNILWL---REMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
C + E + + F + P K + + C+ L I D+
Sbjct: 372 FRCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRC----EGTTVDCSNQKLNKIPDHI 427
Query: 401 FRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
+ + LR L +N + T KL +L ++ + N + +E G F G S + L
Sbjct: 428 PQYTAELR---LNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELL 484
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+T ++ L VR F + D+ GL ++ L+L +N T+ +
Sbjct: 485 LT-SNRLETVRDKMFKGLESLKTLMLRSNRVS-CVGNDSFTGLSSVRLLSLYDNQITTVA 542
Query: 520 E-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLS 576
S L T+++ NP C C++ WL + L ++ T C P LK + ++
Sbjct: 543 PGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVA 602
Query: 577 AED 579
+D
Sbjct: 603 IQD 605
Score = 189 (71.6 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 123/551 (22%), Positives = 213/551 (38%)
Query: 46 SIQRLVLSTNRIKT--VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
S+Q L+L+ N+I VD+ ++ +L + L I G F P L +Q + +
Sbjct: 266 SLQLLLLNANKINCLRVDAFQDLH-NLNLLSLYDNKLQTIAKGTFSP---LRAIQTLYER 321
Query: 104 HFPQQ-IVCSIISPRRVEIFGQNRISRIDQACFEG--LTALRILYLDDNQLRSVPTPSFI 160
H Q +C + N I C L RI + + R +
Sbjct: 322 HLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYF 381
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRL--SALDLRGAGLTNISDNAFRGLSGLRSLVL 218
G + R L+ AD A R + +D L I D+ + + LR L
Sbjct: 382 IPGT-EDYRSKLSG-DCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELR---L 436
Query: 219 TDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 277
+N + T KL +L ++ + N + +E G F G S + L +T ++ L VR
Sbjct: 437 NNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLT-SNRLETVRD 495
Query: 278 GAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRT 336
F + + GL ++ L+L +N T+ + S L T
Sbjct: 496 KMFKGLESLKTLMLRSNRVSC-VGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLST 554
Query: 337 IDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
+++ NP C C++ WL + L ++ T C P LK + ++ +D C
Sbjct: 555 LNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDD 614
Query: 395 NISDNAFR---GLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 450
N R + L ++V N+ L+++P K + K + EL + N F+++ K
Sbjct: 615 NSCSPLSRCPAECTCLDTVVRCSNKGLKALP-KGIPK--DVTELYLDGNQFTLVP----K 667
Query: 451 GLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHL 508
LS K L + SN ++ + +F++ I GL +L L
Sbjct: 668 ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CIPARTFDGLKSLRLL 726
Query: 509 NLKENAFTSFSESMLAWPELRTID---IAENPIECGCNILWLREMLVR--RNTSAVFCNS 563
+L N + E A+ +L + I NP+ C CN+ WL + + + C
Sbjct: 727 SLHGNDISVVPEG--AFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAG 784
Query: 564 PAPLKYKSLIS 574
P + K L++
Sbjct: 785 PGEMADKLLLT 795
Score = 130 (50.8 bits), Expect = 0.00017, P = 0.00017
Identities = 47/185 (25%), Positives = 82/185 (44%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLV 358
IE+GA L +L L L N T S S P+LRT + N + C C++ WL + L
Sbjct: 58 IEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLR 117
Query: 359 RRNTSAVF--CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN- 415
+R ++ C PA L+ ++ + + C+ AG + + L + ++N
Sbjct: 118 QRPRVGLYTQCMGPAHLRGHNVAEVQKREFVCS-AGHQSFMAPSCSVLHCPAACTCSNNI 176
Query: 416 ---R---LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 469
R L IPT +T E+ + QN ++ G F L+R++++ + ++
Sbjct: 177 VDCRGKGLTEIPTNLPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSN-NQISEA 232
Query: 470 RKGAF 474
AF
Sbjct: 233 APDAF 237
Score = 116 (45.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 64 IPIYL--SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRV 119
IP L ++ + L + +IP G F P +KL + L++N+ + S +
Sbjct: 187 IPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSL 246
Query: 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
++G N+I+ + + FEGL +L++L L+ N++ + +F L L L + N T+A
Sbjct: 247 VLYG-NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 305
Query: 180 DGAFNGLGRLSAL 192
G F+ L + L
Sbjct: 306 KGTFSPLRAIQTL 318
Score = 106 (42.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 41/151 (27%), Positives = 69/151 (45%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSL---QHVDLSHTTWLIIPI 85
C+ Q+ N IP H L L+ N ++ A I+ L + ++LS+ I
Sbjct: 415 CSNQKLNK--IPDHIPQYTAELRLNNNEFSVLE-ATGIFKKLPQLRKINLSNNKITDIEE 471
Query: 86 GGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
G F+ + EL L N+ + + + + + NR+S + F GL+++R+L
Sbjct: 472 GAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLL 531
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
L DNQ+ +V SF L L+ L + N F
Sbjct: 532 SLYDNQITTVAPGSFDTLHSLSTLNLLANPF 562
Score = 98 (39.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/83 (28%), Positives = 42/83 (50%)
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
++I L +NQ++++P +F + L++ N + + DGAF L L L L +T
Sbjct: 21 IKISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNIT 80
Query: 201 NISDNAFRGLSGLRSLVLTDNRL 223
+S +F + LR+ L N L
Sbjct: 81 RLSVASFNHMPKLRTFRLHSNNL 103
Score = 85 (35.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 45/192 (23%), Positives = 80/192 (41%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ L+++P K + K + EL + N F+++ K LS K L + SN
Sbjct: 630 LDTVVRCSNKGLKALP-KGIPK--DVTELYLDGNQFTLVP----KELSNYKHLTLIDLSN 682
Query: 272 --LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML 329
++ + +F++ I GL +L L+L N + E
Sbjct: 683 NRISTLSNQSFSNMTQLLTLILSYNRLRC-IPARTFDGLKSLRLLSLHGNDISVVPEG-- 739
Query: 330 AWPELRTID---IAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAE 384
A+ +L + I NP+ C CN+ WL + + + C P + K L++ ++
Sbjct: 740 AFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSK 799
Query: 385 DLGCAGAGLTNI 396
C G NI
Sbjct: 800 KFTCQGPVDVNI 811
Score = 79 (32.9 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
++ +N+I I + F G ++ L LD NQ+ + +F L L L + N T
Sbjct: 22 KISDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITR 81
Query: 178 LADGAFNGLGRLSALDLRGAGL 199
L+ +FN + +L L L
Sbjct: 82 LSVASFNHMPKLRTFRLHSNNL 103
Score = 60 (26.2 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 26/90 (28%), Positives = 38/90 (42%)
Query: 68 LSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVC----SIISPRRVEIF- 122
L ++ DLS IP F + LQL++N QI C + + R +E+
Sbjct: 19 LKIKISDLSENQIQAIPRKAFRGAVDIKNLQLDYN-----QISCIEDGAFRALRDLEVLT 73
Query: 123 -GQNRISRIDQACFEGLTALRILYLDDNQL 151
N I+R+ A F + LR L N L
Sbjct: 74 LNNNNITRLSVASFNHMPKLRTFRLHSNNL 103
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 259 (96.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 94/365 (25%), Positives = 162/365 (44%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D RG GLT I N G+ +R L N ++SIP ++ +L+ ++I +N S +
Sbjct: 105 VDCRGKGLTEIPANLPEGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 161
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
A F+GL L L + G + +T + KG F D + L NL
Sbjct: 162 ADAFQGLKSLTSLVLYG-NKITEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQNL 219
Query: 312 YHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCN 368
L+L +N + S+ + A ++T+ +A+NP C C++ WL + L TS C+
Sbjct: 220 NLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCS 279
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGL--SGLRSLVLTDNRLQ---SIPTK 423
SP L K + + ++ C+G N D+ +R L + + S L ++ + +I
Sbjct: 280 SPRRLANKRISQIKSKKFRCSG----N-QDSQYRHLLVADVGSDFLCPDKCRCEGTIVDC 334
Query: 424 QLSKLTRLE--------ELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAF 474
KL R+ +L + N S+LEA G FK L L+++ ++ + + VR+GAF
Sbjct: 335 SNQKLARVPSHLPEYVTDLRLNDNEISVLEATGVFKKLPNLRKINLSN-NKIKEVREGAF 393
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDI 533
D + GL L L L+ N + S ++ + +R + +
Sbjct: 394 -DGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSL 452
Query: 534 AENPI 538
+N I
Sbjct: 453 YDNRI 457
Score = 220 (82.5 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 96/421 (22%), Positives = 165/421 (39%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ N ++ GAF +L +D+ +++I+ +AF+GL L SLVL N++
Sbjct: 123 IVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKIT 182
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 284
IP L L+ L + N + L F+ L L L + + L + KG FA
Sbjct: 183 EIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYD-NKLQTISKGLFAPLQ 241
Query: 285 XXXXXXXXXXXXXXXIEEGALVGLPNLYHLN-LKENAFTSFSESMLAWPELRTIDIAENP 343
+ + L L + N ++ + S LA R I
Sbjct: 242 AIQTLHLAQNPF---VCDCHLKWLADYLQDNPIETSGARCSSPRRLA--NKRISQIKSKK 296
Query: 344 IECGCNI-LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
C N R +LV S C P + + I + C+ L + +
Sbjct: 297 FRCSGNQDSQYRHLLVADVGSDFLC--PDKCRCEGTI------VDCSNQKLARVPSHLPE 348
Query: 403 GLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
++ LR L DN + + T KL L ++ + N + G F G + ++ L +T
Sbjct: 349 YVTDLR---LNDNEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLT 405
Query: 462 GASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE- 520
G + L V G + D VGL ++ L+L +N ++ +
Sbjct: 406 G-NQLETVH-GRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPG 463
Query: 521 SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAE 578
+ L TI++ NP C C++ WL + L +R + C P LK + ++ +
Sbjct: 464 AFTTLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQ 523
Query: 579 D 579
D
Sbjct: 524 D 524
Score = 206 (77.6 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 58/215 (26%), Positives = 100/215 (46%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 426
CN+ + + S + S + C G GLT I N G+ +R L N ++SIP +
Sbjct: 87 CNANS-ISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEIR---LEQNSIKSIPAGAFT 142
Query: 427 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 486
+ +L+ ++I +N S + A F+GL L L + G + +T + KG F D
Sbjct: 143 QYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYG-NKITEIPKGLF-DGLVSLQLLLL 200
Query: 487 XXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNIL 545
+ + L NL L+L +N + S+ + A ++T+ +A+NP C C++
Sbjct: 201 NANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLK 260
Query: 546 WLREMLVRR--NTSAVFCNSPAPLKYKSLISLSAE 578
WL + L TS C+SP L K + + ++
Sbjct: 261 WLADYLQDNPIETSGARCSSPRRLANKRISQIKSK 295
Score = 174 (66.3 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 79/372 (21%), Positives = 146/372 (39%)
Query: 216 LVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L DN + + T KL L ++ + N + G F G + ++ L +TG + L
Sbjct: 353 LRLNDNEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTG-NQLET 411
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPE 333
V G + VGL ++ L+L +N ++ + +
Sbjct: 412 VH-GRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVS 470
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
L TI++ NP C C++ WL + L +R + C P LK + ++ +D C
Sbjct: 471 LSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEEG 530
Query: 392 G---LTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
+ + + ++V NR L+++P + + K + EL + N + +
Sbjct: 531 NDESSCQLGPRCPEQCTCVETVVRCSNRGLRALP-RGIPK--DVTELYLEGNHLTAVP-- 585
Query: 448 CFKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNL 505
+ LS + L + SN + + F++ I + GL +L
Sbjct: 586 --RELSIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLR-CIPIHSFNGLRSL 642
Query: 506 YHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCN 562
L L N +S E S L + + NP+ C C++ WL E + + C+
Sbjct: 643 RVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCS 702
Query: 563 SPAPLKYKSLIS 574
SP P+ + L++
Sbjct: 703 SPEPMADRLLLT 714
Score = 140 (54.3 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
EG+ +R L+ N ++S+P +F L + + N + +A AF GL L++L L
Sbjct: 121 EGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLY 177
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T I F GL L+ L+L N++ + L L L + N + G F
Sbjct: 178 GNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 237
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 238 APLQAIQTLHL 248
Score = 131 (51.2 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 39/142 (27%), Positives = 67/142 (47%)
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFN 184
+++R+ E +T LR L+DN++ + T F L L ++ + N + +GAF+
Sbjct: 338 KLARVPSHLPEYVTDLR---LNDNEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFD 394
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
G + L L G L + FRGLSGL++L+L N + + L+ + L +
Sbjct: 395 GAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYD 454
Query: 245 NGFSMLEAGCFKGLSYLKRLEI 266
N S + G F L L + +
Sbjct: 455 NRISTITPGAFTTLVSLSTINL 476
Score = 130 (50.8 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 40/130 (30%), Positives = 58/130 (44%)
Query: 119 VEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
VEI QN I I F L+ + + NQ+ + +F L L L + N T
Sbjct: 124 VEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITE 183
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ G F+GL L L L + + N F+ L L L L DN+LQ+I + L +
Sbjct: 184 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAI 243
Query: 238 EELEIGQNGF 247
+ L + QN F
Sbjct: 244 QTLHLAQNPF 253
Score = 128 (50.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ L LR + L +N+++ V +F + EL + N T+ F
Sbjct: 358 NEISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMF 417
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ +S++ F GLS +R L L DNR+ +I + L L + +
Sbjct: 418 RGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLL 477
Query: 244 QNGFS 248
N F+
Sbjct: 478 SNPFN 482
Score = 100 (40.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 41/170 (24%), Positives = 74/170 (43%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIG 86
PSCN AN PS S + + + + +P + + L + IP G
Sbjct: 85 PSCN---ANSISCPSACTCSNNIVDCRGKGLTEIPANLPE--GIVEIRLEQNSIKSIPAG 139
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F +KL + ++ N+ + S + ++G N+I+ I + F+GL +L++L
Sbjct: 140 AFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYG-NKITEIPKGLFDGLVSLQLL 198
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
L+ N++ + +F L L L + N T++ G F L + L L
Sbjct: 199 LLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHL 248
Score = 92 (37.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 189 LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248
L+ +DL + +++ F +S L +L+L+ NRL+ IP + L L L + N S
Sbjct: 594 LTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDIS 653
Query: 249 MLEAGCFKGLSYLKRLEI 266
+ G F L+ L L +
Sbjct: 654 SVPEGSFNDLTSLSHLAL 671
Score = 92 (37.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 37/151 (24%), Positives = 72/151 (47%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYL---SLQHVDLSHTTWLIIPI 85
C+ Q+ L +PSH + L L+ N I ++ A ++ +L+ ++LS+ +
Sbjct: 334 CSNQK--LARVPSHLPEYVTDLRLNDNEISVLE-ATGVFKKLPNLRKINLSNNKIKEVRE 390
Query: 86 GGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
G F+ + EL L N+ + +S + + N IS + F GL+++R+L
Sbjct: 391 GAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLISCVSNDTFVGLSSVRLL 450
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
L DN++ ++ +F L L+ + + N F
Sbjct: 451 SLYDNRISTITPGAFTTLVSLSTINLLSNPF 481
Score = 91 (37.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 26/94 (27%), Positives = 41/94 (43%)
Query: 307 GLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--RNTS 363
GL +L L L N +S E S L + + NP+ C C++ WL E + +
Sbjct: 638 GLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPG 697
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNIS 397
C+SP P+ + L++ C G NI+
Sbjct: 698 IARCSSPEPMADRLLLTTPTHRFQCKGPVDINIA 731
Score = 41 (19.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQL 151
N ISRI F + +R L L N L
Sbjct: 5 NNISRILVTSFNHMPKIRTLRLHSNHL 31
>UNIPROTKB|F1RP63 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:CU466998 RefSeq:XP_003482968.1
Ensembl:ENSSSCT00000010401 GeneID:100153917 KEGG:ssc:100153917
Uniprot:F1RP63
Length = 842
Score = 165 (63.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 64/245 (26%), Positives = 107/245 (43%)
Query: 343 PIECGCNILWLREMLVR---RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
PI C C +L +L+ RN ++ P P + LI AG + +
Sbjct: 332 PIPCNCKVLSPSGLLIHCQERNIESLSDLKPPPQNPRKLI--------LAGNIIHTLMKY 383
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
L L L +NR++ + LTRL++L + N + L G F GL L+ L
Sbjct: 384 DLAEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLY 443
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+ + + + G F + ++ G+P L +NLK N FT
Sbjct: 444 LE-YNGVKEILPGTF-NPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLP 500
Query: 520 ES-MLAWPELRT-IDIAENPIECGCNILWLREMLVR--RN--TSAVFCNSPAPLKYKSLI 573
S +L +L T ID+ +NP +C C+++ L++ + + +N T + C SP L K L
Sbjct: 501 VSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNIVTDEILCTSPEHLDKKELK 560
Query: 574 SLSAE 578
+L++E
Sbjct: 561 ALNSE 565
Score = 153 (58.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 53/184 (28%), Positives = 87/184 (47%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L L L +NR++ + LTRL++L + N + L G F GL L+ L + + +
Sbjct: 391 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLE-YNGV 449
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES-MLAW 331
+ G F + + G+P L +NLK N FT S +L
Sbjct: 450 KEILPGTF-NPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILDD 507
Query: 332 PELRT-IDIAENPIECGCNILWLREMLVR--RN--TSAVFCNSPAPLKYKSLISLSAEDL 386
+L T ID+ +NP +C C+++ L++ + + +N T + C SP L K L +L++E L
Sbjct: 508 LDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNIVTDEILCTSPEHLDKKELKALNSELL 567
Query: 387 GCAG 390
C G
Sbjct: 568 -CPG 570
Score = 134 (52.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F GLT ++L N + + T +F LG+L +L + N L + F+
Sbjct: 76 NGLTMLHANDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILKEDTFH 135
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L +T I +AF L+ L+ L+L DN ++S+P + + L L++
Sbjct: 136 GLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPN-VFRFVPLTHLDLRG 194
Query: 245 NGFSML 250
N L
Sbjct: 195 NQLQTL 200
Score = 128 (50.1 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N I+ I+ F GL L+ L+++ N L + +F L L L+ N T + A
Sbjct: 98 GFNNIADIETGAFNGLGLLKKLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSA 157
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
F+ L RL L L + ++ N FR + L L L N+LQ++P L + R+ +L+
Sbjct: 158 FSKLNRLKVLILNDNAIESLPPNVFRFVP-LTHLDLRGNQLQTLPYVGFLEHIGRILDLQ 216
Query: 242 IGQN 245
+ N
Sbjct: 217 LEDN 220
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 61/238 (25%), Positives = 97/238 (40%)
Query: 362 TSAVFCNSPAPLKYKSLISLSAE---DLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
T + C +K S IS+ A L GLT + N F GL+ S+ L N +
Sbjct: 45 TMLINCEEK-DIKKLSQISVPASRPFHLSLLNNGLTMLHANDFSGLTNAISIHLGFNNIA 103
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
I T + L L++L I N +L+ F GL L+ L+ + +T + AF+
Sbjct: 104 DIETGAFNGLGLLKKLHINHNSLEILKEDTFHGLENLEFLQADN-NFITVIEPSAFSKLN 162
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLP-NLY------HLNLKENA-----FTSFSESMLAWP 526
I+ ++A+ LP N++ HL+L+ N + F E +
Sbjct: 163 RLKVL---------ILNDNAIESLPPNVFRFVPLTHLDLRGNQLQTLPYVGFLEHI---G 210
Query: 527 ELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 580
+ + + +N C C++L WL M + V CNSP K L L E +
Sbjct: 211 RILDLQLEDNKWACNCDLLQLKLWLENMPPQTVIGDVVCNSPPFFKGSILSRLKKESI 268
Score = 125 (49.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 37/125 (29%), Positives = 54/125 (43%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L +N L + F L + +G N + GAFNGLG L L + L +
Sbjct: 71 LSLLNNGLTMLHANDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILK 130
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L +N + I SKL RL+ L + N L F+ + L
Sbjct: 131 EDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNVFRFVP-LTH 189
Query: 264 LEITG 268
L++ G
Sbjct: 190 LDLRG 194
Score = 125 (49.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 52/204 (25%), Positives = 81/204 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L GLT + N F GL+ S+ L N + I T + L L++L I N +L+
Sbjct: 71 LSLLNNGLTMLHANDFSGLTNAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILK 130
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L+ + +T + AF+ + +P L
Sbjct: 131 EDTFHGLENLEFLQADN-NFITVIEPSAFSKLNRLKVLILNDNAIES-LPPNVFRFVP-L 187
Query: 312 YHLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRNT 362
HL+L+ N + F E + + + + +N C C++L WL M +
Sbjct: 188 THLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCDLLQLKLWLENMPPQTVI 244
Query: 363 SAVFCNSPAPLKYKSLISLSAEDL 386
V CNSP K L L E +
Sbjct: 245 GDVVCNSPPFFKGSILSRLKKESI 268
Score = 112 (44.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI +++ F LT L+ LYL+ N L + F+ L L L + N + G
Sbjct: 397 GNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPGT 456
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
FN + +L L L L + + F G+ L + L N+ +P L L L +++
Sbjct: 457 FNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILDDLDLLTQID 515
Query: 242 IGQN 245
+ N
Sbjct: 516 LEDN 519
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 43/157 (27%), Positives = 65/157 (41%)
Query: 111 CSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
C ++SP + I Q R I + R L L N + ++ L L
Sbjct: 337 CKVLSPSGLLIHCQERNIESLSDLKPPPQNP-RKLILAGNIIHTLMKYDLAEYFTLEMLH 395
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+G N L +G+F L RL L L G LT +S F GL L L L N ++ I
Sbjct: 396 LGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNGVKEILPG 455
Query: 230 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ + +L+ L + N +L F G+ L R+ +
Sbjct: 456 TFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINL 491
Score = 99 (39.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
+C P P K ++S S + C + ++SD R L+L N + ++ L
Sbjct: 330 YC--PIPCNCK-VLSPSGLLIHCQERNIESLSDLK-PPPQNPRKLILAGNIIHTLMKYDL 385
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
++ LE L +G N +LE G F L+ L++L + G ++LT++ G F
Sbjct: 386 AEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLTKLSGGMF 433
Score = 95 (38.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L+L N + ++ L++ LE L +G N +LE G F L+ L++L + G ++LT
Sbjct: 368 RKLILAGNIIHTLMKYDLAEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLT 426
Query: 274 RVRKGAF 280
++ G F
Sbjct: 427 KLSGGMF 433
Score = 79 (32.9 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 37/146 (25%), Positives = 61/146 (41%)
Query: 51 VLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQI 109
+L N + +AI I+L ++ I G F L +L +NHN ++
Sbjct: 80 MLHANDFSGLTNAISIHLGFNNI-------ADIETGAFNGLGLLKKLHINHNSLEILKED 132
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
+ N I+ I+ + F L L++L L+DN + S+P F ++ L L
Sbjct: 133 TFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNVFRFVP-LTHLD 191
Query: 170 VGLNVFTTLAD-GAFNGLGRLSALDL 194
+ N TL G +GR+ L L
Sbjct: 192 LRGNQLQTLPYVGFLEHIGRILDLQL 217
Score = 67 (28.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGF-EPQEKLVELQLNHNK 103
L+L+ N I+++ + ++ L H+DL +P GF E ++++LQL NK
Sbjct: 167 LILNDNAIESLPPNVFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 221
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 257 (95.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 93/361 (25%), Positives = 157/361 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D RG GLT I N G+ +R L N ++SIP ++ +L+ ++I +N S +
Sbjct: 105 VDCRGKGLTEIPANLPEGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 161
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+GL L L + G + +T + KG F D + L +L
Sbjct: 162 PDAFQGLKSLTSLVLYG-NKITEIPKGLF-DGLVSLQLLLLNANKINCLRVNTFQDLQSL 219
Query: 312 YHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCN 368
L+L +N + S+ + A ++T+ +A+NP C C++ WL + L TS C+
Sbjct: 220 SLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLADYLQDNPIETSGARCS 279
Query: 369 SPAPLKYKSLISLSAEDLGCAGAG--LTNISDNAFRGL---SGLR---SLVLTDN-RLQS 419
SP L K + + ++ C+G+ + S F L R ++V N +L
Sbjct: 280 SPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLAR 339
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
IP+ +T +L + N S+LEA G FK L L+++ ++ + + V++GAF D
Sbjct: 340 IPSHLPEYVT---DLRLNDNEISVLEATGIFKKLPNLRKINLSN-NRIKEVKEGAF-DGA 394
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENP 537
A GL L L L+ N + S A +R + + +N
Sbjct: 395 ASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNR 454
Query: 538 I 538
I
Sbjct: 455 I 455
Score = 196 (74.1 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 426
CN+ + + S + S + C G GLT I N G+ +R L N ++SIP +
Sbjct: 87 CNANS-ISCPSACTCSNNIVDCRGKGLTEIPANLPEGIVEIR---LEQNSIKSIPAGAFT 142
Query: 427 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 486
+ +L+ ++I +N S + F+GL L L + G + +T + KG F D
Sbjct: 143 QYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYG-NKITEIPKGLF-DGLVSLQLLLL 200
Query: 487 XXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNIL 545
+ + L +L L+L +N + S+ + A ++T+ +A+NP C C++
Sbjct: 201 NANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLR 260
Query: 546 WLREMLVRR--NTSAVFCNSPAPLKYKSLISLSAE 578
WL + L TS C+SP L K + + ++
Sbjct: 261 WLADYLQDNPIETSGARCSSPRRLANKRISQIKSK 295
Score = 169 (64.5 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 89/399 (22%), Positives = 152/399 (38%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
+ +I AF L+ + ++ N++ I L L L + N + + G F GL
Sbjct: 133 IKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGL 192
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
L+ L + A+ + +R F D I +G L + L+L +
Sbjct: 193 VSLQLL-LLNANKINCLRVNTFQDLQSLSLLSLYDNKLQT-ISKGLFAPLQAIQTLHLAQ 250
Query: 319 NAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRNT---SAVF-CNSPAPL 373
N F + L W L + +NPIE G R + +R + S F C+
Sbjct: 251 NPFVC--DCHLRW--LADY-LQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDY 305
Query: 374 K--YKS--LISLSAED-LGCAGAGLTNISDNAFRGLSGLRSLV----LTDNRLQSIP-TK 423
+ + S + L D C G + + R S L V L DN + + T
Sbjct: 306 RSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLEATG 365
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
KL L ++ + N ++ G F G + ++ L +TG + L AF
Sbjct: 366 IFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTG-NQLETAHGRAFRGLSGLKTL 424
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGC 542
+ D GL ++ L+L +N T+ + + L TI++ NP C C
Sbjct: 425 MLRSNLIS-CVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPFNCNC 483
Query: 543 NILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
++ WL + L +R + C P LK + ++ +D
Sbjct: 484 HLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQD 522
Score = 140 (54.3 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 36/131 (27%), Positives = 60/131 (45%)
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
EG+ +R L+ N ++S+P +F L + + N + +A AF GL L++L L
Sbjct: 121 EGIVEIR---LEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLY 177
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
G +T I F GL L+ L+L N++ + L L L + N + G F
Sbjct: 178 GNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLF 237
Query: 256 KGLSYLKRLEI 266
L ++ L +
Sbjct: 238 APLQAIQTLHL 248
Score = 135 (52.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 44/174 (25%), Positives = 77/174 (44%)
Query: 100 NHNKHFPQQIVCSIISPRRVEIFG------QNRISRIDQACFEGLTALRILYLDDNQLRS 153
++ F + ++ P R G +++RI E +T LR L+DN++
Sbjct: 304 DYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARIPSHLPEYVTDLR---LNDNEISV 360
Query: 154 VP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
+ T F L L ++ + N + +GAF+G + L L G L AFRGLSG
Sbjct: 361 LEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSG 420
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L++L+L N + + + L+ + L + N + + G F L L + +
Sbjct: 421 LKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINL 474
Score = 131 (51.2 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 39/125 (31%), Positives = 62/125 (49%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ L LR + L +N+++ V +F + EL + N T AF
Sbjct: 356 NEISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAF 415
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ +S++ F GLS +R L L DNR+ +I + L L + +
Sbjct: 416 RGLSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLL 475
Query: 244 QNGFS 248
N F+
Sbjct: 476 SNPFN 480
Score = 128 (50.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 40/130 (30%), Positives = 58/130 (44%)
Query: 119 VEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
VEI QN I I F L+ + + NQ+ + +F L L L + N T
Sbjct: 124 VEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITE 183
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ G F+GL L L L + + N F+ L L L L DN+LQ+I + L +
Sbjct: 184 IPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAI 243
Query: 238 EELEIGQNGF 247
+ L + QN F
Sbjct: 244 QTLHLAQNPF 253
Score = 123 (48.4 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 66/261 (25%), Positives = 101/261 (38%)
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F+ L LR + L++NR++ + ++EL + N F+GLS LK L +
Sbjct: 367 FKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLML 426
Query: 267 TGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
SNL V FA I GA L +L +NL N F
Sbjct: 427 R--SNLISCVSNDTFAGLSSVRLLSLYDNRITT-ITPGAFTTLVSLSTINLLSNPFNCNC 483
Query: 326 E-SMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF-CNSPAPLKYKSLISLS 382
+ L W R I ++ NP C +L+E+ ++ F C+ + L
Sbjct: 484 HLAWLGKWLRKRRI-VSGNP-RCQ-KPFFLKEIPIQDVAIQDFTCDGNDESSCQ-LGPRC 539
Query: 383 AEDLGCAGAGLTNISDNAFRGL-SGL----RSLVLTDNRLQSIPTKQLSKLTRLEELEIG 437
E C + S+ R L G+ L L N L ++P K+LS L +++
Sbjct: 540 PEQCTCVET-VVRCSNRGLRALPKGIPKDVTELYLEGNHLTAVP-KELSSFRHLTLIDLS 597
Query: 438 QNGFSMLEAGCFKGLSYLKRL 458
N ML F +S+L L
Sbjct: 598 NNSIGMLTNYTFSNMSHLSTL 618
Score = 101 (40.6 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 40/170 (23%), Positives = 75/170 (44%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIG 86
P+CN AN PS S + + + + +P + + L + IP G
Sbjct: 85 PACN---ANSISCPSACTCSNNIVDCRGKGLTEIPANLPE--GIVEIRLEQNSIKSIPAG 139
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F +KL + ++ N+ + S + ++G N+I+ I + F+GL +L++L
Sbjct: 140 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYG-NKITEIPKGLFDGLVSLQLL 198
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
L+ N++ + +F L L+ L + N T++ G F L + L L
Sbjct: 199 LLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHL 248
Score = 98 (39.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 43/177 (24%), Positives = 76/177 (42%)
Query: 4 DAGQELRSKC-MNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS 62
D S+C M+ P R + L IPSH + L L+ N I ++
Sbjct: 304 DYRSRFSSECFMDLVCPDRCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLE- 362
Query: 63 AIPIYL---SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
A I+ +L+ ++LS+ + G F+ + EL L N+ +S +
Sbjct: 363 ATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLK 422
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+ N IS + F GL+++R+L L DN++ ++ +F L L+ + + N F
Sbjct: 423 TLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNPF 479
Score = 90 (36.7 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 374 KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 433
++ +LI LS +G LTN + F +S L +L+L+ NRL+ IP + L L
Sbjct: 589 RHLTLIDLSNNSIGM----LTNYT---FSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRV 641
Query: 434 LEIGQNGFSMLEAGCFKGLSYLKRL 458
L + N S + G F L+ L L
Sbjct: 642 LTLHGNDISSVPEGSFNDLTSLSHL 666
Score = 66 (28.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 404 LSGLRSLVLTD---NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
LS R L L D N + + S ++ L L + N + F GL L+ L +
Sbjct: 585 LSSFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTL 644
Query: 461 TGASNLTRVRKGAFAD 476
G ++++ V +G+F D
Sbjct: 645 HG-NDISSVPEGSFND 659
Score = 44 (20.5 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 501 GLP-NLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 538
G+P ++ L L+ N T+ + + ++ L ID++ N I
Sbjct: 563 GIPKDVTELYLEGNHLTAVPKELSSFRHLTLIDLSNNSI 601
Score = 41 (19.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQL 151
N ISRI F + +R L L N L
Sbjct: 5 NNISRILVTSFNHMPKIRTLRLHSNHL 31
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 247 (92.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 108/412 (26%), Positives = 169/412 (41%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIG 86
S + E L +P+ +P L LS N + + + +L L+ + LS IP
Sbjct: 49 SADCSELGLSEVPADLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPRQ 108
Query: 87 GFEPQE--KLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F K++ LQ N + P + + + S + + + N IS + + FEGL++LR L
Sbjct: 109 AFSGLHSLKILMLQSNQLRGIPAEALWELPSLQSLRL-DANLISLVPERSFEGLSSLRHL 167
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
+LDDN L +P + L L + + LN + D AF L L L L + ++
Sbjct: 168 WLDDNALTEIPVRALNNLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGT 227
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
++F GL L +L L N LQ P + L RL+EL N + F G L+ +
Sbjct: 228 HSFEGLHNLETLDLNYNELQEFPVA-IRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTI 286
Query: 265 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF 324
+ + V + AF + L G +L L L
Sbjct: 287 HFYD-NPIQFVGRSAFQYLSKLHTLSLNGATDIQEFPD--LKGTTSLEILTLTRAGIRLL 343
Query: 325 SESMLAW-PELRTIDIAENPIECGCNI---LWLREMLVRRNTSAVFCNSPAPLKYKSLIS 380
M P LR ++++ N IE ++ L E+ ++ N A + L S
Sbjct: 344 PAGMCQQLPRLRILELSHNQIEELPSLHRCQKLEEIGLQHNR---IWEIGADT-FSQLSS 399
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
L A DL + + I AF L L L LTDN+L ++P L L L+
Sbjct: 400 LQALDL--SWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLPLAGLGGLMHLK 449
Score = 209 (78.6 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 99/413 (23%), Positives = 171/413 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F L L L L N L +P +F L L L + N + A
Sbjct: 76 NNLTELQPGLFHHLRFLEELRLSGNHLSHIPRQAFSGLHSLKILMLQSNQLRGIPAEALW 135
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L +L L ++ + + +F GLS LR L L DN L IP + L+ L L+ + +
Sbjct: 136 ELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLAL 195
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + F+ L+ L L + + + V +F A
Sbjct: 196 NRIRHIPDYAFQNLTSLVVLHLHN-NRIQHVGTHSFEGLHNLETLDLNYNELQEF--PVA 252
Query: 305 LVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRNT 362
+ L L L N + E + + P L+TI +NPI+ G + + L + +T
Sbjct: 253 IRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAF---QYLSKLHT 309
Query: 363 SAVFCNSPAPLK-YKSLI-SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
++ N ++ + L + S E L AG+ + + L LR L L+ N+++ +
Sbjct: 310 LSL--NGATDIQEFPDLKGTTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSHNQIEEL 367
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 480
P+ L + +LEE+ + N + A F LS L+ L+++ + + + AF+
Sbjct: 368 PS--LHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNA-IRAIHPEAFSTLRSL 424
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDI 533
+ L GL L HL LK N S + S ++P+LR +++
Sbjct: 425 VKLDLTDNQLTTL----PLAGLGGLMHLKLKGNLALSQAFSKDSFPKLRILEV 473
Score = 203 (76.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 93/384 (24%), Positives = 150/384 (39%)
Query: 89 EPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDD 148
+P ++L +N+ + + + + G N +S I + F GL +L+IL L
Sbjct: 65 DPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSG-NHLSHIPRQAFSGLHSLKILMLQS 123
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
NQLR +P + L L LR+ N+ + + + +F GL L L L LT I A
Sbjct: 124 NQLRGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALN 183
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
L L+++ L NR++ IP LT L L + N + F+GL L+ L++
Sbjct: 184 NLPALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDL-- 241
Query: 269 ASNLTRVRKGAFA-DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES 327
N +++ A I E A +G P L ++ +N S
Sbjct: 242 --NYNELQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRS 299
Query: 328 MLAW-PELRTI------DIAENPIECGCN---ILWLREMLVRRNTSAVFCNSPAPLKYKS 377
+ +L T+ DI E P G IL L +R A C L+
Sbjct: 300 AFQYLSKLHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIRL-LPAGMCQQLPRLRILE 358
Query: 378 LISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 437
L E+L + L + L NR+ I S+L+ L+ L++
Sbjct: 359 LSHNQIEELP------------SLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLS 406
Query: 438 QNGFSMLEAGCFKGLSYLKRLEIT 461
N + F L L +L++T
Sbjct: 407 WNAIRAIHPEAFSTLRSLVKLDLT 430
Score = 195 (73.7 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 79/299 (26%), Positives = 133/299 (44%)
Query: 45 PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P++Q + L+ NRI+ + D A SL + L + + FE L L LN+N+
Sbjct: 186 PALQAMTLALNRIRHIPDYAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNE 245
Query: 104 HFPQQIVCSIISPRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
Q+ +I + R++ G N I I + F G L+ ++ DN ++ V +F Y
Sbjct: 246 L--QEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQY 303
Query: 162 LGMLAELRVGLNVFTTLADGA-FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
L L L LN T + + G L L L AG+ + + L LR L L+
Sbjct: 304 LSKLHTL--SLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPAGMCQQLPRLRILELSH 361
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N+++ +P+ L + +LEE+ + N + A F LS L+ L+++ + + + AF
Sbjct: 362 NQIEELPS--LHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNA-IRAIHPEAF 418
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDI 339
+ L GL L HL LK N S + S ++P+LR +++
Sbjct: 419 STLRSLVKLDLTDNQLTTL----PLAGLGGLMHLKLKGNLALSQAFSKDSFPKLRILEV 473
Score = 131 (51.2 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 77/324 (23%), Positives = 124/324 (38%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L +P L LT L++ N + L+ G F L +L+ L ++G ++L+ + + AF+
Sbjct: 57 LSEVPA-DLDPLTAY--LDLSMNNLTELQPGLFHHLRFLEELRLSG-NHLSHIPRQAFSG 112
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAE 341
E AL LP+L L L N + E S LR + + +
Sbjct: 113 LHSLKILMLQSNQLRGIPAE-ALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDD 171
Query: 342 N-----PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
N P+ N+ L+ M + N + P +++L SL L + ++
Sbjct: 172 NALTEIPVRALNNLPALQAMTLALNRIR---HIP-DYAFQNLTSLVV--LHLHNNRIQHV 225
Query: 397 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
++F GL L +L L N LQ P + L RL+EL N + F G L+
Sbjct: 226 GTHSFEGLHNLETLDLNYNELQEFPVA-IRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQ 284
Query: 457 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFT 516
+ + + V + AF I E L G +L L L
Sbjct: 285 TIHFYD-NPIQFVGRSAFQ--YLSKLHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIR 341
Query: 517 SFSESMLAW-PELRTIDIAENPIE 539
M P LR ++++ N IE
Sbjct: 342 LLPAGMCQQLPRLRILELSHNQIE 365
>RGD|1306550 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] InterPro:IPR001611 PROSITE:PS51450 RGD:1306550
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099859 EMBL:CH473951 CTD:84189 OMA:YFELKAN
OrthoDB:EOG4X0MRT IPI:IPI00205859 RefSeq:NP_001099527.1
UniGene:Rn.99063 Ensembl:ENSRNOT00000038433 GeneID:290467
KEGG:rno:290467 UCSC:RGD:1306550 NextBio:631101 Uniprot:D3ZP44
Length = 840
Score = 160 (61.4 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 62/245 (25%), Positives = 103/245 (42%)
Query: 343 PIECGCNILWLREMLVR---RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
P+ C C +L +L+ RN +V P P + LI AG + +
Sbjct: 329 PVPCNCKVLSPSGLLIHCQERNIESVSDLQPPPHNPRKLI--------LAGNIIHTLMKA 380
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
L L L +NR++ + LTRL++L + N + L G F GLS L+ L
Sbjct: 381 DLMDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLY 440
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+ + + + G F + ++ +G+P L +NLK N FT
Sbjct: 441 LE-YNAVKEILPGTF-NPMPKLKVLYLNNNLLHVLPAHIFLGIP-LTRVNLKTNQFTHLP 497
Query: 520 ESMLA--WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLI 573
S + L ID+ +NP +C C+++ W+ ++ T + C SP L K L
Sbjct: 498 VSNILDDLDLLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTVTDDILCASPGHLDKKELK 557
Query: 574 SLSAE 578
+L++E
Sbjct: 558 ALNSE 562
Score = 146 (56.5 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 51/184 (27%), Positives = 83/184 (45%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L L L +NR++ + LTRL++L + N + L G F GLS L+ L + + +
Sbjct: 388 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLE-YNAV 446
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-- 330
+ G F + + +G+P L +NLK N FT S +
Sbjct: 447 KEILPGTF-NPMPKLKVLYLNNNLLHVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNILDD 504
Query: 331 WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
L ID+ +NP +C C+++ W+ ++ T + C SP L K L +L++E L
Sbjct: 505 LDLLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTVTDDILCASPGHLDKKELKALNSELL 564
Query: 387 GCAG 390
C G
Sbjct: 565 -CPG 567
Score = 138 (53.6 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F GLT ++L N + + T +F LG+L +L + N L + F+
Sbjct: 74 NGLTTLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFH 133
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L +T I +AF L+ L+ L+L DN ++S+P + + L L++
Sbjct: 134 GLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRG 192
Query: 245 NGFSML 250
N L
Sbjct: 193 NQLQTL 198
Score = 135 (52.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 61/248 (24%), Positives = 101/248 (40%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L GLT + N F GL+ S+ L N + I T + L L++L I N +L+
Sbjct: 69 LSLLNNGLTTLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 128
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L+ + +T + + AF+ + +P L
Sbjct: 129 EDTFHGLENLEFLQADN-NFITVIEQSAFSKLNRLKVLILNDNAIES-LPPNIFRFVP-L 185
Query: 312 YHLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRNT 362
HL+L+ N + F E + + + + +N C C +L WL M +
Sbjct: 186 THLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCELLQLKNWLENMPPQSII 242
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
V C SP PL S++S ++ C + ++ L + S +D+RL S T
Sbjct: 243 GDVICYSP-PLFKGSILSRLKKESICPTPPVYEEHEDPAGSLLAITSST-SDSRLSSKNT 300
Query: 423 KQLSKLTR 430
L + T+
Sbjct: 301 SILKQPTK 308
Score = 132 (51.5 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L +N L ++ T F L + +G N + GAFNGLG L L + L +
Sbjct: 69 LSLLNNGLTTLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 128
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L +N + I SKL RL+ L + N L F+ + L
Sbjct: 129 EDTFHGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTH 187
Query: 264 LEITG 268
L++ G
Sbjct: 188 LDLRG 192
Score = 128 (50.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N I+ I+ F GL L+ L+++ N L + +F L L L+ N T + A
Sbjct: 96 GFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEQSA 155
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
F+ L RL L L + ++ N FR + L L L N+LQ++P L + R+ +L+
Sbjct: 156 FSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEHIGRILDLQ 214
Query: 242 IGQN 245
+ N
Sbjct: 215 LEDN 218
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 54/206 (26%), Positives = 89/206 (43%)
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
GLT + N F GL+ S+ L N + I T + L L++L I N +L+ F G
Sbjct: 75 GLTTLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHG 134
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLP-NLY---- 506
L L+ L+ + +T + + AF+ I+ ++A+ LP N++
Sbjct: 135 LENLEFLQADN-NFITVIEQSAFSKLNRLKVL---------ILNDNAIESLPPNIFRFVP 184
Query: 507 --HLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRN 555
HL+L+ N + F E + + + + +N C C +L WL M +
Sbjct: 185 LTHLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCELLQLKNWLENMPPQSI 241
Query: 556 TSAVFCNSPAPLKYKSLIS-LSAEDL 580
V C SP PL S++S L E +
Sbjct: 242 IGDVICYSP-PLFKGSILSRLKKESI 266
Score = 112 (44.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI +++ F LT L+ LYL+ N L + F+ L L L + N + G
Sbjct: 394 GNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNAVKEILPGT 453
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
FN + +L L L L + + F G+ L + L N+ +P L L L +++
Sbjct: 454 FNPMPKLKVLYLNNNLLHVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNILDDLDLLIQID 512
Query: 242 IGQN 245
+ N
Sbjct: 513 LEDN 516
Score = 112 (44.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 44/157 (28%), Positives = 67/157 (42%)
Query: 111 CSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
C ++SP + I Q R I + R L L N + ++ + L L
Sbjct: 334 CKVLSPSGLLIHCQERNIESVSDLQPPPHNP-RKLILAGNIIHTLMKADLMDYFTLEMLH 392
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+G N L +G+F L RL L L G LT + F GLS L L L N ++ I
Sbjct: 393 LGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNAVKEILPG 452
Query: 230 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ + +L+ L + N +L A F G+ L R+ +
Sbjct: 453 TFNPMPKLKVLYLNNNLLHVLPAHIFLGIP-LTRVNL 488
Score = 103 (41.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
+C P P K ++S S + C + ++SD R L+L N + ++ L
Sbjct: 327 YC--PVPCNCK-VLSPSGLLIHCQERNIESVSDLQ-PPPHNPRKLILAGNIIHTLMKADL 382
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
LE L +G N +LE G F L+ L++L + G ++LT++ KG F
Sbjct: 383 MDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLTKLYKGMF 430
Score = 98 (39.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L+L N + ++ L LE L +G N +LE G F L+ L++L + G ++LT
Sbjct: 365 RKLILAGNIIHTLMKADLMDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLT 423
Query: 274 RVRKGAF 280
++ KG F
Sbjct: 424 KLYKGMF 430
Score = 89 (36.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 38/145 (26%), Positives = 61/145 (42%)
Query: 52 LSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIV 110
L TN + +A+ I+L ++ I G F L +L +NHN ++
Sbjct: 79 LHTNDFSGLTNALSIHLGFNNI-------ADIETGAFNGLGLLKQLHINHNSLEILKEDT 131
Query: 111 CSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170
+ N I+ I+Q+ F L L++L L+DN + S+P P+ L L +
Sbjct: 132 FHGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLP-PNIFRFVPLTHLDL 190
Query: 171 GLNVFTTLAD-GAFNGLGRLSALDL 194
N TL G +GR+ L L
Sbjct: 191 RGNQLQTLPYVGFLEHIGRILDLQL 215
Score = 68 (29.0 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGF-EPQEKLVELQLNHNK 103
L+L+ N I+++ I ++ L H+DL +P GF E ++++LQL NK
Sbjct: 165 LILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 219
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 243 (90.6 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 105/436 (24%), Positives = 172/436 (39%)
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNV-FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
Q+ ++P+P + M ++ LN T L + F + L AL + L NI AFR
Sbjct: 43 QIVAMPSP-LPWNAMSLQI---LNTHITELPEDKFLNISALIALKMEKNELANIMPGAFR 98
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
L LR L L +N+L+++P + + LE L + N ++ F S LK L++ G
Sbjct: 99 NLGSLRHLSLANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYG 158
Query: 269 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM 328
+NL + +G F D + L NL L L EN +
Sbjct: 159 -NNLEYIPEGVF-DHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGT 216
Query: 329 L-AWPELRTIDIAENPI-ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
A L+ + + EN I + L R S + P + L L+ L
Sbjct: 217 FDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNK--L 274
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 446
G L +S F + LR L L +N + S+P S L +L+ L + N S +
Sbjct: 275 TLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISP 334
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
G F GL+ L+ L + +N + G + + L
Sbjct: 335 GAFNGLTNLRELSLH--TNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLM 392
Query: 507 HLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLV----RRNTSAV-F 560
+ L+ N + + L + + +NP C NIL L + L+ R T +
Sbjct: 393 TIQLQNNNLENLPLGIFDHLGNLCELRLYDNPWRCDSNILPLHDWLILNRARLGTDTLPV 452
Query: 561 CNSPAPLKYKSLISLS 576
C+SPA ++ +SL+ ++
Sbjct: 453 CSSPASVRGQSLVIIN 468
Score = 220 (82.5 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 105/424 (24%), Positives = 180/424 (42%)
Query: 28 SCNLQEANLDVI--PSHSNPSIQRLVLSTN-RIKTVDSAIPIY-LSLQHVDLSHTTWLII 83
SC A L PS S V T +I + S +P +SLQ ++ +H T L
Sbjct: 12 SCQAWAAGLAYYGCPSECTCSRASQVECTGAQIVAMPSPLPWNAMSLQILN-THITEL-- 68
Query: 84 PIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTAL 141
P F L+ L++ N+ + ++ S R + + N++ + F+ + L
Sbjct: 69 PEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSL-ANNKLKNLPVRLFQDVNNL 127
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
L L +NQL + F L EL++ N + +G F+ L L+ L+L G T+
Sbjct: 128 ETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTH 187
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
+S F+ L L+ L L +NRL IP L L+EL + +N L G F L
Sbjct: 188 LSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNL 247
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
+RL ++ ++++ + G F + G +PNL L L N
Sbjct: 248 QRLYLSN-NHISHLPPGIFMQLPHLNKLTLFGNSLKE-LSPGVFGPMPNLRELWLYNNHI 305
Query: 322 TSFSESMLAW-PELRTIDIAENP---IECGC-NILW-LREMLVRRNTSAVFCNSPAPLKY 375
TS ++ + +L+ + ++ N I G N L LRE+ + N + +
Sbjct: 306 TSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNV----F 361
Query: 376 KSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 435
+SL +L ++ L + + F ++GL ++ L +N L+++P L L EL
Sbjct: 362 RSLANL--RNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIFDHLGNLCELR 419
Query: 436 IGQN 439
+ N
Sbjct: 420 LYDN 423
>UNIPROTKB|E2RFX7 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 OMA:YFELKAN EMBL:AAEX03013284
RefSeq:XP_003639854.1 Ensembl:ENSCAFT00000008522 GeneID:100856466
KEGG:cfa:100856466 NextBio:20859498 Uniprot:E2RFX7
Length = 840
Score = 159 (61.0 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 63/245 (25%), Positives = 106/245 (43%)
Query: 343 PIECGCNILWLREMLVR---RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
PI C C +L +LV RN ++ P P + L+ AG + + +
Sbjct: 330 PIPCNCKVLSPSGLLVHCQERNIESLSDLKPPPQNPRKLV--------LAGNIIHTLMKS 381
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
L L L +NR++ + LTRL++L + N + L G F GL L+ L
Sbjct: 382 DLVEYFTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLY 441
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+ + + + G F + ++ G+ +L +NLK N FT
Sbjct: 442 LE-YNAVKEILPGTF-NPMPKLKVLYLNNNLLQVLPPHIFSGV-SLTRINLKTNQFTHLP 498
Query: 520 ES-MLAWPELRT-IDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLI 573
S +L +L T ID+ +NP +C C+++ WL+++ T + C SP L K L
Sbjct: 499 VSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWLQKLSKNTVTDDILCTSPEHLDKKELK 558
Query: 574 SLSAE 578
+L++E
Sbjct: 559 ALTSE 563
Score = 146 (56.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 52/184 (28%), Positives = 85/184 (46%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L L L +NR++ + LTRL++L + N + L G F GL L+ L + + +
Sbjct: 389 LEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLE-YNAV 447
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES-MLAW 331
+ G F + + G+ +L +NLK N FT S +L
Sbjct: 448 KEILPGTF-NPMPKLKVLYLNNNLLQVLPPHIFSGV-SLTRINLKTNQFTHLPVSNILDD 505
Query: 332 PELRT-IDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
+L T ID+ +NP +C C+++ WL+++ T + C SP L K L +L++E L
Sbjct: 506 LDLLTQIDLEDNPWDCSCDLVGLQQWLQKLSKNTVTDDILCTSPEHLDKKELKALTSELL 565
Query: 387 GCAG 390
C G
Sbjct: 566 -CPG 568
Score = 138 (53.6 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 37/126 (29%), Positives = 61/126 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F GLT L+L N + + T +F LG+L +L + N L + F+
Sbjct: 74 NGLTMLHTNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFH 133
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L +T I +AF L+ L+ L+L DN ++S+P + + L L++
Sbjct: 134 GLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRG 192
Query: 245 NGFSML 250
N L
Sbjct: 193 NQLQTL 198
Score = 133 (51.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 59/248 (23%), Positives = 98/248 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L GLT + N F GL+ SL L N + I T + L L++L I N +L+
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 128
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L+ + +T + AF+ + +P L
Sbjct: 129 EDTFHGLENLEFLQADN-NFITVIEPSAFSKLNRLKVLILNDNAIES-LPPNIFRFVP-L 185
Query: 312 YHLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRNT 362
HL+L+ N + F E + + + + +N C C++L WL M +
Sbjct: 186 THLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWTCNCDLLELKIWLENMPPQSVI 242
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
+ CNSP K L L E + C + ++ L + ++D+R+ + T
Sbjct: 243 GDIVCNSPPFFKGSILSRLKKESI-CPTPPVYEEHEDPSGSLHLAATSSISDSRMSTKST 301
Query: 423 KQLSKLTR 430
L T+
Sbjct: 302 SLLRPATK 309
Score = 132 (51.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L +N L + T F L L +G N + GAFNGLG L L + L +
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 128
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L +N + I SKL RL+ L + N L F+ + L
Sbjct: 129 EDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTH 187
Query: 264 LEITG 268
L++ G
Sbjct: 188 LDLRG 192
Score = 127 (49.8 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N I+ I+ F GL L+ L+++ N L + +F L L L+ N T + A
Sbjct: 96 GFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSA 155
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
F+ L RL L L + ++ N FR + L L L N+LQ++P L + R+ +L+
Sbjct: 156 FSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEHIGRILDLQ 214
Query: 242 IGQN 245
+ N
Sbjct: 215 LEDN 218
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 53/205 (25%), Positives = 86/205 (41%)
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
GLT + N F GL+ SL L N + I T + L L++L I N +L+ F G
Sbjct: 75 GLTMLHTNDFSGLTNAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHG 134
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLP-NLY---- 506
L L+ L+ + +T + AF+ I+ ++A+ LP N++
Sbjct: 135 LENLEFLQADN-NFITVIEPSAFSKLNRLKVL---------ILNDNAIESLPPNIFRFVP 184
Query: 507 --HLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRN 555
HL+L+ N + F E + + + + +N C C++L WL M +
Sbjct: 185 LTHLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWTCNCDLLELKIWLENMPPQSV 241
Query: 556 TSAVFCNSPAPLKYKSLISLSAEDL 580
+ CNSP K L L E +
Sbjct: 242 IGDIVCNSPPFFKGSILSRLKKESI 266
Score = 120 (47.3 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI +++ F LT L+ LYL+ N L + F+ L L L + N + G
Sbjct: 395 GNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLEYNAVKEILPGT 454
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
FN + +L L L L + + F G+S L + L N+ +P L L L +++
Sbjct: 455 FNPMPKLKVLYLNNNLLQVLPPHIFSGVS-LTRINLKTNQFTHLPVSNILDDLDLLTQID 513
Query: 242 IGQN 245
+ N
Sbjct: 514 LEDN 517
Score = 116 (45.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 43/157 (27%), Positives = 67/157 (42%)
Query: 111 CSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
C ++SP + + Q R I + R L L N + ++ + L L
Sbjct: 335 CKVLSPSGLLVHCQERNIESLSDLKPPPQNP-RKLVLAGNIIHTLMKSDLVEYFTLEMLH 393
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+G N L +G+F L RL L L G LT +S F GL L L L N ++ I
Sbjct: 394 LGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLEYNAVKEILPG 453
Query: 230 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ + +L+ L + N +L F G+S L R+ +
Sbjct: 454 TFNPMPKLKVLYLNNNLLQVLPPHIFSGVS-LTRINL 489
Score = 100 (40.3 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
+C P P K ++S S + C + ++SD R LVL N + ++ L
Sbjct: 328 YC--PIPCNCK-VLSPSGLLVHCQERNIESLSDLK-PPPQNPRKLVLAGNIIHTLMKSDL 383
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ LE L +G N +LE G F L+ L++L + G ++LT++ +G F
Sbjct: 384 VEYFTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNG-NHLTKLSRGMF 431
Score = 97 (39.2 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R LVL N + ++ L + LE L +G N +LE G F L+ L++L + G ++LT
Sbjct: 366 RKLVLAGNIIHTLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNG-NHLT 424
Query: 274 RVRKGAF 280
++ +G F
Sbjct: 425 KLSRGMF 431
Score = 84 (34.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 37/146 (25%), Positives = 61/146 (41%)
Query: 51 VLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQI 109
+L TN + +AI ++L ++ I G F L +L +NHN ++
Sbjct: 78 MLHTNDFSGLTNAISLHLGFNNI-------ADIETGAFNGLGLLKQLHINHNSLEILKED 130
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
+ N I+ I+ + F L L++L L+DN + S+P P+ L L
Sbjct: 131 TFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLP-PNIFRFVPLTHLD 189
Query: 170 VGLNVFTTLAD-GAFNGLGRLSALDL 194
+ N TL G +GR+ L L
Sbjct: 190 LRGNQLQTLPYVGFLEHIGRILDLQL 215
Score = 68 (29.0 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGF-EPQEKLVELQLNHNK 103
L+L+ N I+++ I ++ L H+DL +P GF E ++++LQL NK
Sbjct: 165 LILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 219
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 244 (91.0 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 90/339 (26%), Positives = 152/339 (44%)
Query: 106 PQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 165
P + ++ + R+++ N+I + A F GLT+L L L +NQ+ S+ +F+ L L
Sbjct: 217 PWNALSTLSALERLDL-ANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKL 275
Query: 166 AELRVGLNVFTTLADGAFNGLGR---LSALDLRGAGLTN-ISDNAFRGLSGLRSLVLTDN 221
L++G N A + L + L LDL+ L +S+ G+ L SL L N
Sbjct: 276 EVLKLGGNRLGDYAQ-SLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRN 334
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
++SI K L+ +RL L + N +L+ F GL L L+++ + + + A
Sbjct: 335 LIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLS-YNGIVAI-SSASL 392
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIA 340
+ + LP+L L L N + + + + EL ++ +
Sbjct: 393 QHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQMQ 452
Query: 341 ENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
ENP+ C C+I WL+E + + SA C +P L+ L+ + E L C + N+
Sbjct: 453 ENPLSCDCSIRPFAEWLQESQLHSSLSAS-CVTPPRLEGAPLLQVPVETLSC---DMDNV 508
Query: 397 S-DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 434
DNA + L +L + Q+ P K LS+ L EL
Sbjct: 509 EKDNA-NIMQHLETLAKPN---QTSPIKDLSEEIILHEL 543
Score = 194 (73.4 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 63/226 (27%), Positives = 110/226 (48%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
+++RL L+ N+IK + +A + L SL +++LS+ I F KL L+L N+
Sbjct: 226 ALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRL 285
Query: 104 -HFPQQI--VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
+ Q + + +S R++++ N + + G+ L L L+ N ++S+ +
Sbjct: 286 GDYAQSLRSLSQCLSLRQLDLQANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALA 345
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
L L + N L D AF GLG L +LDL G+ IS + + LS L L LT
Sbjct: 346 NFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTH 405
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
N L+++ + ++ L L EL + N S++ G L+ L++
Sbjct: 406 NFLRALTSDLIAPLPSLRELRLAGNDISIVARNAMDGARELESLQM 451
Score = 159 (61.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 86/377 (22%), Positives = 151/377 (40%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L ++L +RL++ P +S L + + +N + +A F +S L L I+ + +
Sbjct: 137 LHGMMLLADRLRTSPYS-ISLL----DCSL-RNVTFLSDAKIFDNVS-LHGLVIS-SGEI 188
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES-MLAW 331
RV K AF + AL L L L+L N + + +
Sbjct: 189 KRVHKSAFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGL 248
Query: 332 PELRTIDIAENPIECGCNILW--LREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
L ++++ N I + LR++ V + + L+ S LS L
Sbjct: 249 TSLVYLELSNNQISSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQC-LSLRQLDLQ 307
Query: 390 GAGLTN-ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
L +S+ G+ L SL L N ++SI K L+ +RL L + N +L+
Sbjct: 308 ANNLNGPLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHA 367
Query: 449 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHL 508
F GL L L+++ + + + A + D + LP+L L
Sbjct: 368 FFGLGALDSLDLS-YNGIVAI-SSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLREL 425
Query: 509 NLKENAFTSFSESMLAWP-ELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNS 563
L N + + + + EL ++ + ENP+ C C+I WL+E + + SA C +
Sbjct: 426 RLAGNDISIVARNAMDGARELESLQMQENPLSCDCSIRPFAEWLQESQLHSSLSAS-CVT 484
Query: 564 PAPLKYKSLISLSAEDL 580
P L+ L+ + E L
Sbjct: 485 PPRLEGAPLLQVPVETL 501
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 63/240 (26%), Positives = 111/240 (46%)
Query: 47 IQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
+Q L L N + +V +A+ +L+ +DL++ + F LV L+L++N+
Sbjct: 203 LQALGLPGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQ-I 261
Query: 106 PQQIVCSIISPRRVEIF--GQNRISRIDQAC--FEGLTALRILYLDDNQLRSVPTPSFIY 161
+ ++ R++E+ G NR+ Q+ +LR L L N L P
Sbjct: 262 SSISQRTFVNLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNG-PLSEQTL 320
Query: 162 LGM--LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
GM L L + N+ ++ + A RL +L LR + + D+AF GL L SL L+
Sbjct: 321 PGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSLDLS 380
Query: 220 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 279
N + +I + L L+RL L++ N L + L L+ L + G ++++ V + A
Sbjct: 381 YNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSLRELRLAG-NDISIVARNA 439
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/268 (24%), Positives = 110/268 (41%)
Query: 182 AFNGL-GRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
AF G+ G L AL L G L ++ NA LS L L L +N+++++ T LT L L
Sbjct: 195 AFLGIRGPLQALGLPGNALMSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYL 254
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG--AFADXXXXXXXXXXXXXXXX 298
E+ N S + F L L+ L++ G + L + + +
Sbjct: 255 ELSNNQISSISQRTFVNLRKLEVLKL-GGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNG 313
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCN--ILWLRE 355
+ E L G+ NL LNL N S LA + L ++ + N I+ + L
Sbjct: 314 PLSEQTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGA 373
Query: 356 M-LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
+ + + + + S A L++ S +++ L L ++ + L LR L L
Sbjct: 374 LDSLDLSYNGIVAISSASLQHLSRLTV----LDLTHNFLRALTSDLIAPLPSLRELRLAG 429
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFS 442
N + + + LE L++ +N S
Sbjct: 430 NDISIVARNAMDGARELESLQMQENPLS 457
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 241 (89.9 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 110/433 (25%), Positives = 170/433 (39%)
Query: 153 SVPTPSFIYLGMLAELRVGLNV-FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLS 211
+VPTP + M ++ LN T L + F + L AL + L+ I+ AFR L
Sbjct: 46 AVPTP-LPWNAMSLQI---LNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLG 101
Query: 212 GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
LR L L +N+LQ +P L LE L + N ++ F S LK L++ G ++
Sbjct: 102 SLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHG-NH 160
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-A 330
L + GAF D I L NL L L EN T
Sbjct: 161 LEYIPDGAF-DHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDG 219
Query: 331 WPELRTIDIAENPIEC-GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
L+ + + +N I + L R S + P + L L+ L
Sbjct: 220 LVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNR--LTLF 277
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
G L +S F + LR L L DN + S+P S L +L+ L + +N S + G F
Sbjct: 278 GNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAF 337
Query: 450 KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLN 509
GL+ L+ L + +N + G + + + L +
Sbjct: 338 NGLTELRELSLH--TNALQDLDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQ 395
Query: 510 LKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLV----RRNTSAV-FCNS 563
L+ N + + +L + + +NP C +IL LR L+ R T V C S
Sbjct: 396 LQNNQLENLPLGIFDHLGKLCELRLYDNPWRCDSDILPLRNWLLLNQPRLGTDTVPVCFS 455
Query: 564 PAPLKYKSLISLS 576
PA ++ +SLI ++
Sbjct: 456 PANVRGQSLIIIN 468
Score = 235 (87.8 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 82/321 (25%), Positives = 145/321 (45%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N++ + F+GL +L L L NQL + F L EL++ N + DGAF+
Sbjct: 111 NKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFD 170
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L+ L+L LT+IS F+ L L+ L L +NRL IP L L+EL + Q
Sbjct: 171 HLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELALQQ 230
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N +L G F L+RL ++ ++++++ F + G
Sbjct: 231 NQIGLLSPGLFHNNHNLQRLYLSN-NHISQLPPSVFMQLPQLNRLTLFGNSLKE-LSPGI 288
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIEC---GC--NILWLREMLV 358
+PNL L L +N +S +++ + +L+ + ++ N I G + LRE+ +
Sbjct: 289 FGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSL 348
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
N + ++ L +L +++ L + N F ++GL ++ L +N+L+
Sbjct: 349 HTNALQDLDGNV----FRMLANL--QNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLE 402
Query: 419 SIPTKQLSKLTRLEELEIGQN 439
++P L +L EL + N
Sbjct: 403 NLPLGIFDHLGKLCELRLYDN 423
Score = 231 (86.4 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 87/343 (25%), Positives = 140/343 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N +SRI F L +LR L L +N+L+ +P F L L L + N + F
Sbjct: 86 KNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHF 145
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+ L L L G L I D AF L GL L L N L I + L L+ L +
Sbjct: 146 SQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLY 205
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
+N + + G F GL L+ L + + + + G F + +
Sbjct: 206 ENRLTDIPMGTFDGLVNLQELALQ-QNQIGLLSPGLFHNNHNLQRLYLSNNHISQ-LPPS 263
Query: 304 ALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAEN-----PIECGCNILWLREML 357
+ LP L L L N+ S + P LR + + +N P N+ L+ ++
Sbjct: 264 VFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLI 323
Query: 358 VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL 417
+ RN + +P + L L +L L ++ N FR L+ L+++ L +NRL
Sbjct: 324 LSRNQISFI----SPGAFNGLTEL--RELSLHTNALQDLDGNVFRMLANLQNISLQNNRL 377
Query: 418 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
+ +P + + L +++ N L G F L L L +
Sbjct: 378 RQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLCELRL 420
Score = 221 (82.9 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 87/346 (25%), Positives = 148/346 (42%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
S++ L+LS+N++ + A S L+ + L IP G F+ L +L L N
Sbjct: 126 SLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSL 185
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
H ++ + + + + ++ +NR++ I F+GL L+ L L NQ+ + F
Sbjct: 186 THISPRVFQHLGNLQVLRLY-ENRLTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNN 244
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N + L F L +L+ L L G L +S F + LR L L DN
Sbjct: 245 HNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNH 304
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
+ S+P S L +L+ L + +N S + G F GL+ L+ L + +N + G
Sbjct: 305 ISSLPDNVFSNLRQLQVLILSRNQISFISPGAFNGLTELRELSLH--TNALQDLDGNVFR 362
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAE 341
+ + L + L+ N + + +L + + +
Sbjct: 363 MLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLCELRLYD 422
Query: 342 NPIECGCNILWLREMLV----RRNTSAV-FCNSPAPLKYKSLISLS 382
NP C +IL LR L+ R T V C SPA ++ +SLI ++
Sbjct: 423 NPWRCDSDILPLRNWLLLNQPRLGTDTVPVCFSPANVRGQSLIIIN 468
Score = 212 (79.7 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 89/355 (25%), Positives = 144/355 (40%)
Query: 127 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 186
I+ ++++ F ++AL L ++ N+L + +F LG L L + N L G F GL
Sbjct: 65 ITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGL 124
Query: 187 GRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 246
L +L L L I F S L+ L L N L+ IP L L +L +G+N
Sbjct: 125 DSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNS 184
Query: 247 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV 306
+ + F+ L L+ L + + LT + G F D + G
Sbjct: 185 LTHISPRVFQHLGNLQVLRLY-ENRLTDIPMGTF-DGLVNLQELALQQNQIGLLSPGLFH 242
Query: 307 GLPNLYHLNLKENAFTSFSESM-LAWPELRTIDIAENPI-ECGCNILW----LREM-LVR 359
NL L L N + S+ + P+L + + N + E I LRE+ L
Sbjct: 243 NNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYD 302
Query: 360 RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
+ S++ N + L+ ++ LS + IS AF GL+ LR L L N LQ
Sbjct: 303 NHISSLPDNVFSNLRQLQVLILSRNQISF-------ISPGAFNGLTELRELSLHTNALQD 355
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ L L+ + + N L F ++ L +++ + L + G F
Sbjct: 356 LDGNVFRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQN-NQLENLPLGIF 409
Score = 191 (72.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/282 (25%), Positives = 120/282 (42%)
Query: 69 SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-------HFPQQIVCSIISPRRVEI 121
SL+++ L++ ++PIG F+ + L L L+ N+ HF Q CS + + +++
Sbjct: 102 SLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQ---CSNL--KELQL 156
Query: 122 FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 181
G N + I F+ L L L L N L + F +LG L LR+ N T + G
Sbjct: 157 HG-NHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMG 215
Query: 182 AFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 241
F+GL L L L+ + +S F L+ L L++N + +P +L +L L
Sbjct: 216 TFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLT 275
Query: 242 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE 301
+ N L G F + L+ L + ++++ + F++ I
Sbjct: 276 LFGNSLKELSPGIFGPMPNLRELWLYD-NHISSLPDNVFSNLRQLQVLILSRNQISF-IS 333
Query: 302 EGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAEN 342
GA GL L L+L NA ++ L+ I + N
Sbjct: 334 PGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNN 375
Score = 158 (60.7 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 57/183 (31%), Positives = 80/183 (43%)
Query: 42 HSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQL- 99
H+N ++QRL LS N I + ++ + L L + L + + G F P L EL L
Sbjct: 242 HNNHNLQRLYLSNNHISQLPPSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLY 301
Query: 100 -NHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 158
NH P + S + +V I +N+IS I F GLT LR L L N L+ +
Sbjct: 302 DNHISSLPDNVF-SNLRQLQVLILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNV 360
Query: 159 FIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVL 218
F L L + + N L F + L A+ L+ L N+ F L L L L
Sbjct: 361 FRMLANLQNISLQNNRLRQLPGNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLCELRL 420
Query: 219 TDN 221
DN
Sbjct: 421 YDN 423
>UNIPROTKB|Q9H5Y7 [details] [associations]
symbol:SLITRK6 "SLIT and NTRK-like protein 6" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 EMBL:CH471093
HOGENOM:HOG000290667 HOVERGEN:HBG056407 EMBL:AK021931 EMBL:AK026427
EMBL:AK292793 EMBL:AL137517 EMBL:BX648640 EMBL:AL162373
EMBL:BC101070 EMBL:BC101071 EMBL:BC101072 EMBL:BC101073
IPI:IPI00176398 PIR:T46279 RefSeq:NP_115605.2 UniGene:Hs.525105
ProteinModelPortal:Q9H5Y7 SMR:Q9H5Y7 STRING:Q9H5Y7
PhosphoSite:Q9H5Y7 DMDM:59803110 PaxDb:Q9H5Y7 PRIDE:Q9H5Y7
DNASU:84189 Ensembl:ENST00000400286 GeneID:84189 KEGG:hsa:84189
UCSC:uc001vll.1 CTD:84189 GeneCards:GC13M086366 HGNC:HGNC:23503
HPA:HPA014491 MIM:609681 neXtProt:NX_Q9H5Y7 PharmGKB:PA134928433
eggNOG:NOG113965 InParanoid:Q9H5Y7 OMA:YFELKAN OrthoDB:EOG4X0MRT
PhylomeDB:Q9H5Y7 GenomeRNAi:84189 NextBio:73578 Bgee:Q9H5Y7
CleanEx:HS_SLITRK6 Genevestigator:Q9H5Y7 GermOnline:ENSG00000184564
Uniprot:Q9H5Y7
Length = 841
Score = 165 (63.1 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 64/247 (25%), Positives = 108/247 (43%)
Query: 343 PIECGCNILWLREMLVR---RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
PI C C +L +L+ RN ++ P P + LI AG + ++ +
Sbjct: 330 PIPCNCKVLSPSGLLIHCQERNIESLSDLRPPPQNPRKLI--------LAGNIIHSLMKS 381
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
L L L +NR++ + LTRL++L + N + L G F GL L+ L
Sbjct: 382 DLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLY 441
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+ + + + G F + ++ G+P L +NLK N FT
Sbjct: 442 LE-YNAIKEILPGTF-NPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTKVNLKTNQFTHLP 498
Query: 520 ES-MLAWPELRT-IDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLI 573
S +L +L T ID+ +NP +C C+++ W++++ T + C SP L K L
Sbjct: 499 VSNILDDLDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDDILCTSPGHLDKKELK 558
Query: 574 SLSAEDL 580
+L++E L
Sbjct: 559 ALNSEIL 565
Score = 152 (58.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 52/184 (28%), Positives = 85/184 (46%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L L L +NR++ + LTRL++L + N + L G F GL L+ L + + +
Sbjct: 389 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLE-YNAI 447
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES-MLAW 331
+ G F + + G+P L +NLK N FT S +L
Sbjct: 448 KEILPGTF-NPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTKVNLKTNQFTHLPVSNILDD 505
Query: 332 PELRT-IDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
+L T ID+ +NP +C C+++ W++++ T + C SP L K L +L++E L
Sbjct: 506 LDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDDILCTSPGHLDKKELKALNSEIL 565
Query: 387 GCAG 390
C G
Sbjct: 566 -CPG 568
Score = 130 (50.8 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 35/126 (27%), Positives = 60/126 (47%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F GLT ++L N + + +F LG+L +L + N L + F+
Sbjct: 74 NGLTMLHTNDFSGLTNAISIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILKEDTFH 133
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L +T I +AF L+ L+ L+L DN ++S+P + + L L++
Sbjct: 134 GLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRG 192
Query: 245 NGFSML 250
N L
Sbjct: 193 NQLQTL 198
Score = 128 (50.1 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 38/125 (30%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L +N L + T F L + +G N + GAFNGLG L L + L +
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAISIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILK 128
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L +N + I SKL RL+ L + N L F+ + L
Sbjct: 129 EDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTH 187
Query: 264 LEITG 268
L++ G
Sbjct: 188 LDLRG 192
Score = 125 (49.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N I+ I+ F GL L+ L+++ N L + +F L L L+ N T + A
Sbjct: 96 GFNNIADIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEPSA 155
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
F+ L RL L L + ++ N FR + L L L N+LQ++P L + R+ +L+
Sbjct: 156 FSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEHIGRILDLQ 214
Query: 242 IGQN 245
+ N
Sbjct: 215 LEDN 218
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
Identities = 59/246 (23%), Positives = 96/246 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L GLT + N F GL+ S+ L N + I + L L++L I N +L+
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNAISIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILK 128
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L+ + +T + AF+ + +P L
Sbjct: 129 EDTFHGLENLEFLQADN-NFITVIEPSAFSKLNRLKVLILNDNAIES-LPPNIFRFVP-L 185
Query: 312 YHLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRNT 362
HL+L+ N + F E + + + + +N C C++L WL M +
Sbjct: 186 THLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCDLLQLKTWLENMPPQSII 242
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
V CNSP K L L E + C + ++ L + + D+R+ S T
Sbjct: 243 GDVVCNSPPFFKGSILSRLKKESI-CPTPPVYEEHEDPSGSLHLAATSSINDSRM-STKT 300
Query: 423 KQLSKL 428
+ KL
Sbjct: 301 TSILKL 306
Score = 122 (48.0 bits), Expect = 0.00067, P = 0.00067
Identities = 59/238 (24%), Positives = 96/238 (40%)
Query: 362 TSAVFCNSPAPLKYKSLISLSAE---DLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
T + C + +K S IS+ L GLT + N F GL+ S+ L N +
Sbjct: 43 TMLINCEAKG-IKMVSEISVPPSRPFQLSLLNNGLTMLHTNDFSGLTNAISIHLGFNNIA 101
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
I + L L++L I N +L+ F GL L+ L+ + +T + AF+
Sbjct: 102 DIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADN-NFITVIEPSAFSKLN 160
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLP-NLY------HLNLKENA-----FTSFSESMLAWP 526
I+ ++A+ LP N++ HL+L+ N + F E +
Sbjct: 161 RLKVL---------ILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHI---G 208
Query: 527 ELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 580
+ + + +N C C++L WL M + V CNSP K L L E +
Sbjct: 209 RILDLQLEDNKWACNCDLLQLKTWLENMPPQSIIGDVVCNSPPFFKGSILSRLKKESI 266
Score = 118 (46.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 43/153 (28%), Positives = 63/153 (41%)
Query: 111 CSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
C ++SP + I Q R I + R L L N + S+ + L L
Sbjct: 335 CKVLSPSGLLIHCQERNIESLSDLRPPPQNP-RKLILAGNIIHSLMKSDLVEYFTLEMLH 393
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+G N L +G+F L RL L L G LT +S F GL L L L N ++ I
Sbjct: 394 LGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNAIKEILPG 453
Query: 230 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ + +L+ L + N +L F G+ K
Sbjct: 454 TFNPMPKLKVLYLNNNLLQVLPPHIFSGVPLTK 486
Score = 117 (46.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI +++ F LT L+ LYL+ N L + F+ L L L + N + G
Sbjct: 395 GNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNAIKEILPGT 454
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
FN + +L L L L + + F G+ L + L N+ +P L L L +++
Sbjct: 455 FNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTKVNLKTNQFTHLPVSNILDDLDLLTQID 513
Query: 242 IGQN 245
+ N
Sbjct: 514 LEDN 517
Score = 108 (43.1 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 33/109 (30%), Positives = 54/109 (49%)
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
+C P P K ++S S + C + ++SD R L+L N + S+ L
Sbjct: 328 YC--PIPCNCK-VLSPSGLLIHCQERNIESLSDLR-PPPQNPRKLILAGNIIHSLMKSDL 383
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ LE L +G N +LE G F L+ L++L + G ++LT++ KG F
Sbjct: 384 VEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLTKLSKGMF 431
Score = 104 (41.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L+L N + S+ L + LE L +G N +LE G F L+ L++L + G ++LT
Sbjct: 366 RKLILAGNIIHSLMKSDLVEYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLT 424
Query: 274 RVRKGAF 280
++ KG F
Sbjct: 425 KLSKGMF 431
Score = 91 (37.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 39/146 (26%), Positives = 62/146 (42%)
Query: 51 VLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQI 109
+L TN + +AI I+L ++ I IG F L +L +NHN ++
Sbjct: 78 MLHTNDFSGLTNAISIHLGFNNI-------ADIEIGAFNGLGLLKQLHINHNSLEILKED 130
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
+ N I+ I+ + F L L++L L+DN + S+P P+ L L
Sbjct: 131 TFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIESLP-PNIFRFVPLTHLD 189
Query: 170 VGLNVFTTLAD-GAFNGLGRLSALDL 194
+ N TL G +GR+ L L
Sbjct: 190 LRGNQLQTLPYVGFLEHIGRILDLQL 215
Score = 71 (30.1 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 239 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
+L + NG +ML F GL+ + + G +N+ + GAF +
Sbjct: 68 QLSLLNNGLTMLHTNDFSGLTNAISIHL-GFNNIADIEIGAF-NGLGLLKQLHINHNSLE 125
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 345
++E GL NL L N T S + L+ + + +N IE
Sbjct: 126 ILKEDTFHGLENLEFLQADNNFITVIEPSAFSKLNRLKVLILNDNAIE 173
Score = 68 (29.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGF-EPQEKLVELQLNHNK 103
L+L+ N I+++ I ++ L H+DL +P GF E ++++LQL NK
Sbjct: 165 LILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 219
>MGI|MGI:2443198 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2443198 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 HOGENOM:HOG000290667
HOVERGEN:HBG056407 CTD:84189 eggNOG:NOG113965 OMA:YFELKAN
OrthoDB:EOG4X0MRT EMBL:AB097575 EMBL:AK029275 IPI:IPI00223927
RefSeq:NP_780708.1 UniGene:Mm.49728 ProteinModelPortal:Q8C110
SMR:Q8C110 STRING:Q8C110 PhosphoSite:Q8C110 PRIDE:Q8C110
Ensembl:ENSMUST00000078386 GeneID:239250 KEGG:mmu:239250
InParanoid:Q8C110 NextBio:384048 Bgee:Q8C110 CleanEx:MM_SLITRK6
Genevestigator:Q8C110 GermOnline:ENSMUSG00000045871 Uniprot:Q8C110
Length = 840
Score = 158 (60.7 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 60/245 (24%), Positives = 103/245 (42%)
Query: 343 PIECGCNILWLREMLVR---RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
PI C C +L +L+ RN ++ P P + LI AG + + +
Sbjct: 329 PIPCNCKVLSPSGLLIHCQERNIESLSDLQPPPHNPRKLI--------LAGNIIHTLMKS 380
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
L L L +NR++ + LTRL++L + N + L G F GL L+ L
Sbjct: 381 DLTDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLHSLEYLY 440
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+ + + + G F + ++ +G+P L +NLK N FT
Sbjct: 441 LE-YNAVKEILPGTF-NPMPKLKVLYLNNNLLQVLPAHIFLGIP-LTRVNLKTNQFTHLP 497
Query: 520 ESMLA--WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLI 573
S + L ID+ +NP +C C+++ W+ ++ T + C SP L K L
Sbjct: 498 VSNILDDLDFLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTMTDDILCTSPGHLDKKELK 557
Query: 574 SLSAE 578
+L+++
Sbjct: 558 ALNSD 562
Score = 147 (56.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 50/184 (27%), Positives = 82/184 (44%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L L L +NR++ + LTRL++L + N + L G F GL L+ L + + +
Sbjct: 388 LEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLHSLEYLYLE-YNAV 446
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-- 330
+ G F + + +G+P L +NLK N FT S +
Sbjct: 447 KEILPGTF-NPMPKLKVLYLNNNLLQVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNILDD 504
Query: 331 WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
L ID+ +NP +C C+++ W+ ++ T + C SP L K L +L++ DL
Sbjct: 505 LDFLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTMTDDILCTSPGHLDKKELKALNS-DL 563
Query: 387 GCAG 390
C G
Sbjct: 564 LCPG 567
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 62/248 (25%), Positives = 97/248 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L GLT + N F GL+ S+ L N + I T + L L++L I N +L+
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 128
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L+ + +T + AF+ + +P L
Sbjct: 129 EDTFHGLENLEFLQADN-NFITIIEPSAFSKLNRLKVLILNDNAIES-LPPNIFRFVP-L 185
Query: 312 YHLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRNT 362
HL+L+ N + F E + + + + +N C C +L WL M +
Sbjct: 186 THLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCELLQLKNWLENMPPQSII 242
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
V C SP P K L L E C + ++ L + S +D+RL S T
Sbjct: 243 GDVICYSPPPFKGSVLSRLKKESF-CPTPPVYEEHEDPSGSLLAITSST-SDSRLSSKNT 300
Query: 423 KQLSKLTR 430
L + T+
Sbjct: 301 SILKQPTK 308
Score = 137 (53.3 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F GLT ++L N + + T +F LG+L +L + N L + F+
Sbjct: 74 NGLTMLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFH 133
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L +T I +AF L+ L+ L+L DN ++S+P + + L L++
Sbjct: 134 GLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIESLPPN-IFRFVPLTHLDLRG 192
Query: 245 NGFSML 250
N L
Sbjct: 193 NQLQTL 198
Score = 130 (50.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 38/125 (30%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L +N L + T F L + +G N + GAFNGLG L L + L +
Sbjct: 69 LSLLNNGLTMLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILK 128
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L +N + I SKL RL+ L + N L F+ + L
Sbjct: 129 EDTFHGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTH 187
Query: 264 LEITG 268
L++ G
Sbjct: 188 LDLRG 192
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 53/203 (26%), Positives = 84/203 (41%)
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
GLT + N F GL+ S+ L N + I T + L L++L I N +L+ F G
Sbjct: 75 GLTMLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHG 134
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLP-NLY---- 506
L L+ L+ + +T + AF+ I+ ++A+ LP N++
Sbjct: 135 LENLEFLQADN-NFITIIEPSAFSKLNRLKVL---------ILNDNAIESLPPNIFRFVP 184
Query: 507 --HLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRN 555
HL+L+ N + F E + + + + +N C C +L WL M +
Sbjct: 185 LTHLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCELLQLKNWLENMPPQSI 241
Query: 556 TSAVFCNSPAPLKYKSLISLSAE 578
V C SP P K L L E
Sbjct: 242 IGDVICYSPPPFKGSVLSRLKKE 264
Score = 126 (49.4 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N I+ I+ F GL L+ L+++ N L + +F L L L+ N T + A
Sbjct: 96 GFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITIIEPSA 155
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
F+ L RL L L + ++ N FR + L L L N+LQ++P L + R+ +L+
Sbjct: 156 FSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEHIGRILDLQ 214
Query: 242 IGQN 245
+ N
Sbjct: 215 LEDN 218
Score = 111 (44.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI +++ F LT L+ LYL+ N L + F+ L L L + N + G
Sbjct: 394 GNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLHSLEYLYLEYNAVKEILPGT 453
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
FN + +L L L L + + F G+ L + L N+ +P L L L +++
Sbjct: 454 FNPMPKLKVLYLNNNLLQVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNILDDLDFLIQID 512
Query: 242 IGQN 245
+ N
Sbjct: 513 LEDN 516
Score = 108 (43.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/157 (27%), Positives = 66/157 (42%)
Query: 111 CSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
C ++SP + I Q R I + R L L N + ++ L L
Sbjct: 334 CKVLSPSGLLIHCQERNIESLSDLQPPPHNP-RKLILAGNIIHTLMKSDLTDYFTLEMLH 392
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+G N L +G+F L RL L L G LT ++ F GL L L L N ++ I
Sbjct: 393 LGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLHSLEYLYLEYNAVKEILPG 452
Query: 230 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ + +L+ L + N +L A F G+ L R+ +
Sbjct: 453 TFNPMPKLKVLYLNNNLLQVLPAHIFLGIP-LTRVNL 488
Score = 106 (42.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
+C P P K ++S S + C + ++SD R L+L N + ++ L
Sbjct: 327 YC--PIPCNCK-VLSPSGLLIHCQERNIESLSDLQ-PPPHNPRKLILAGNIIHTLMKSDL 382
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ LE L +G N +LE G F L+ L++L + G ++LT++ KG F
Sbjct: 383 TDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLTKLNKGMF 430
Score = 103 (41.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L+L N + ++ L+ LE L +G N +LE G F L+ L++L + G ++LT
Sbjct: 365 RKLILAGNIIHTLMKSDLTDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNG-NHLT 423
Query: 274 RVRKGAF 280
++ KG F
Sbjct: 424 KLNKGMF 430
Score = 84 (34.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 37/146 (25%), Positives = 61/146 (41%)
Query: 51 VLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQI 109
+L TN + +A+ I+L ++ I G F L +L +NHN ++
Sbjct: 78 MLHTNDFSGLTNALSIHLGFNNI-------ADIETGAFNGLGLLKQLHINHNSLEILKED 130
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
+ N I+ I+ + F L L++L L+DN + S+P P+ L L
Sbjct: 131 TFHGLENLEFLQADNNFITIIEPSAFSKLNRLKVLILNDNAIESLP-PNIFRFVPLTHLD 189
Query: 170 VGLNVFTTLAD-GAFNGLGRLSALDL 194
+ N TL G +GR+ L L
Sbjct: 190 LRGNQLQTLPYVGFLEHIGRILDLQL 215
Score = 68 (29.0 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGF-EPQEKLVELQLNHNK 103
L+L+ N I+++ I ++ L H+DL +P GF E ++++LQL NK
Sbjct: 165 LILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 219
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 227 (85.0 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 96/413 (23%), Positives = 157/413 (38%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L ++ I AF+ L L L L N LQ P
Sbjct: 65 NNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFL 124
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
+L L++ +N + F+G +K L++ + ++ + GAF
Sbjct: 125 GTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLD-YNQISCIEDGAFR-ALRDLEVLTL 182
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW--------PELRTIDIAENPI 344
+ + +P L L N + + LAW P + P
Sbjct: 183 NNNNITRLSVASFNHMPKLRTFRLHSNNL--YCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 345 EC-GCNILWLREM-LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
G N+ +++ V + S + L + + S + C G GLT I N
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE 300
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
++ +R L N ++ IP S +L L++ N S L F+GL L L + G
Sbjct: 301 TITEIR---LEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYG 357
Query: 463 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESM 522
+ +T + K F + + DA L NL L+L +N + ++
Sbjct: 358 -NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGT 415
Query: 523 L-AWPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSL 572
A ++T+ +A+NP C C++ WL + L TS C SP L K +
Sbjct: 416 FSALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRI 468
Score = 214 (80.4 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 75/291 (25%), Positives = 125/291 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL G +T I+ F GL LR L L +NR+ +I L LE L + +N +
Sbjct: 60 LDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFP 119
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F G + L RL+++ + + + + AF IE+GA L +L
Sbjct: 120 ELLFLGTAKLYRLDLS-ENQIQAIPRKAFRGAVDIKNLQLDYNQISC-IEDGAFRALRDL 177
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T S S P+LRT + N + C C++ WL + L +R ++ C
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 369 SPAPLKYKSLISLSAEDLGCAG-AGLTNISDNAFRGLSGLR-SLVLTDNR---LQSIPTK 423
P+ L+ ++ + + C+G S + + S + D R L IPT
Sbjct: 238 GPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTN 297
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+T E+ + QN ++ G F L+RL+++ + ++ + AF
Sbjct: 298 LPETIT---EIRLEQNSIRVIPPGAFSPYKKLRRLDLSN-NQISELAPDAF 344
Score = 180 (68.4 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 90/400 (22%), Positives = 161/400 (40%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFS 248
+ +D L I D+ + + LR L +N + T KL +L ++ N +
Sbjct: 507 TTVDCSNQRLNKIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKIT 563
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+E G F+G S + + +T ++ L V+ F + + +GL
Sbjct: 564 DIEEGAFEGASGVNEILLT-SNRLENVQHKMFKGLESLKTLMLRSNRISC-VGNDSFIGL 621
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAV 365
++ L+L +N T+ + + L T+++ NP C C++ WL E L R+ T
Sbjct: 622 GSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNCHLAWLGEWLRRKRIVTGNP 681
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG---LRSLVLTDNR-LQSIP 421
C P LK + ++ +D C N R S L ++V N+ L+ +P
Sbjct: 682 RCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPSECTCLDTVVRCSNKGLKVLP 741
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN--LTRVRKGAFADXXX 479
K + K + EL + N F+++ K LS K L + SN ++ + +F++
Sbjct: 742 -KGIPK--DVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQ 794
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTID---IAEN 536
I GL +L L+L N + E A+ +L + I N
Sbjct: 795 LLTLILSYNRLR-CIPPRTFDGLKSLRLLSLHGNDISVVPEG--AFNDLSALSHLAIGAN 851
Query: 537 PIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLIS 574
P+ C CN+ WL + + + C P + K L++
Sbjct: 852 PLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLT 891
Score = 172 (65.6 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 57/209 (27%), Positives = 88/209 (42%)
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
S V C+ A I + E L G +T I+ F GL LR L L +NR+ +I
Sbjct: 37 STVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIER 96
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
L LE L + +N + F G + L RL+++ + + + + AF
Sbjct: 97 GAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDLS-ENQIQAIPRKAFRGAVDIKN 155
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECG 541
IE+ A L +L L L N T S S P+LRT + N + C
Sbjct: 156 LQLDYNQIS-CIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 214
Query: 542 CNILWLREMLVRRNTSAVF--CNSPAPLK 568
C++ WL + L +R ++ C P+ L+
Sbjct: 215 CHLAWLSDWLRQRPRVGLYTQCMGPSHLR 243
Score = 167 (63.8 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 89/399 (22%), Positives = 155/399 (38%)
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
I AF LR L L++N++ + L L L + N + L F+GL L
Sbjct: 315 IPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSL 374
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
+ L + A+ + +R AF D + +G L + ++L +N F
Sbjct: 375 QLL-LLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT-VAKGTFSALRAIQTMHLAQNPF 432
Query: 322 TSFSESMLAWPELRTIDIAENPIEC-GCNILWLREMLVRRN---TSAVF-CNSPAPLKYK 376
+ L W L + NPIE G R + +R S F C+ + K
Sbjct: 433 --ICDCHLKW--LADY-LHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGTEDYRSK 487
Query: 377 ----SLISLSAED--------LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TK 423
L+ + + C+ L I D+ + + LR L +N + T
Sbjct: 488 LSGDCFADLACPEKCRCEGTTVDCSNQRLNKIPDHIPQYTAELR---LNNNEFTVLEATG 544
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
KL +L ++ N + +E G F+G S + + +T ++ L V+ F
Sbjct: 545 IFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT-SNRLENVQHKMFKGLESLKTL 603
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGC 542
+ D+ +GL ++ L+L +N T+ + + L T+++ NP C C
Sbjct: 604 MLRSNRIS-CVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPFNCNC 662
Query: 543 NILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
++ WL E L R+ T C P LK + ++ +D
Sbjct: 663 HLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQD 701
Score = 155 (59.6 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 166 AELRVGLNVFTTL-ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
AELR+ N FT L A G F L +L ++ +T+I + AF G SG+ ++LT NRL+
Sbjct: 528 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE 587
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
++ K L L+ L + N S + F GL ++ L + + +T V GAF
Sbjct: 588 NVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYD-NQITTVAPGAF 642
Score = 147 (56.8 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 45/155 (29%), Positives = 73/155 (47%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+++ G N I+RI + F GL LR+L L +N++ ++ +F L L LR+ N
Sbjct: 59 RLDLNGNN-ITRITKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQL 117
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ F G +L LDL + I AFRG +++L L N++ I L L
Sbjct: 118 FPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDL 177
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
E L + N + L F + L+ + ++NL
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLH-SNNL 211
Score = 119 (46.9 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 46/186 (24%), Positives = 83/186 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHV---DL 75
P++ S + + L +P + + +RL L+ N I + + I + L+H+ L
Sbjct: 29 PAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRI-TKID-FAGLRHLRVLQL 86
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
I G F+ ++L L+LN N + FP+ + R+++ +N+I I +
Sbjct: 87 MENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAKLYRLDL-SENQIQAIPRK 145
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F G ++ L LD NQ+ + +F L L L + N T L+ +FN + +L
Sbjct: 146 AFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFR 205
Query: 194 LRGAGL 199
L L
Sbjct: 206 LHSNNL 211
Score = 118 (46.6 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L + L+ +DL ++ +S+ +F ++ L +L+L+ NRL+
Sbjct: 748 VTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 806
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP + L L L + N S++ G F LS L L I GA+ L
Sbjct: 807 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI-GANPL 853
Score = 101 (40.6 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 42/161 (26%), Positives = 68/161 (42%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSL---QHVDL 75
P + + + L+ IP H L L+ N TV A I+ L + ++
Sbjct: 499 PEKCRCEGTTVDCSNQRLNKIPDHIPQYTAELRLNNNEF-TVLEATGIFKKLPQLRKINF 557
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQAC 134
S+ I G FE + E+ L N+ Q + + + + NRIS +
Sbjct: 558 SNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDS 617
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
F GL ++R+L L DNQ+ +V +F L L+ L + N F
Sbjct: 618 FIGLGSVRLLSLYDNQITTVAPGAFDSLHSLSTLNLLANPF 658
Score = 96 (38.9 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94
L IP++ +I + L N I+ + A Y L+ +DLS+ + F+ L
Sbjct: 291 LTEIPTNLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSL 350
Query: 95 VELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L L NK P+ + + S + + + N+I+ + F+ L L +L L DN+L+
Sbjct: 351 NSLVLYGNKITELPKSLFEGLFSLQLL-LLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 409
Query: 153 SVPTPSFIYLGMLAELRVGLNVF 175
+V +F L + + + N F
Sbjct: 410 TVAKGTFSALRAIQTMHLAQNPF 432
Score = 37 (18.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 531 IDIAENPIECGC 542
+D E ++CGC
Sbjct: 1505 VDEVEKVVKCGC 1516
Score = 37 (18.1 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 337 IDIAENPIECGC 348
+D E ++CGC
Sbjct: 1505 VDEVEKVVKCGC 1516
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 239 (89.2 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 77/269 (28%), Positives = 121/269 (44%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N+I +D F+G+ L+ L L N++ + +F + L L + N L G F
Sbjct: 92 NQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFY 151
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL +L L LR GLT I AF L L L NRL+ + L+RL EL +
Sbjct: 152 GLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEH 211
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N FS + F L+ L+ L + + + V +G ++
Sbjct: 212 NQFSRINFFLFPRLANLRALYLQW-NRIRAVNQG-LPWSWYTLQRLDISGNEIQVLDPVV 269
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECG---CN-ILWLREMLVR 359
LPNL LNL+ N + S+ ++A W L TI +A N +CG C ++WL+
Sbjct: 270 FQCLPNLQVLNLESNKLANVSQEVVAAWISLTTISLAGNMWDCGPGICPLVVWLKNFRGT 329
Query: 360 RNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
++T+ + C+SP L+ + +I S + C
Sbjct: 330 KDTN-IICSSPKHLQGEKVIEASKNYIDC 357
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 45/132 (34%), Positives = 65/132 (49%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F L L LYLD NQ+ V + +F + L EL + N + L + F+G+ L +LDL
Sbjct: 78 FAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDL 137
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
L + F GL L++L L N L +IP + + LE L++G N +L
Sbjct: 138 SYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTA 197
Query: 255 FKGLSYLKRLEI 266
F GLS L L +
Sbjct: 198 FLGLSRLMELHL 209
Score = 157 (60.3 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 55/198 (27%), Positives = 89/198 (44%)
Query: 384 EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 443
++L GLT I AF L L L NRL+ + L+RL EL + N FS
Sbjct: 157 QNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSR 216
Query: 444 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLP 503
+ F L+ L+ L + + + V +G +++ LP
Sbjct: 217 INFFLFPRLANLRALYLQW-NRIRAVNQG-LPWSWYTLQRLDISGNEIQVLDPVVFQCLP 274
Query: 504 NLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECG---CN-ILWLREMLVRRNTSA 558
NL LNL+ N + S+ ++A W L TI +A N +CG C ++WL+ ++T+
Sbjct: 275 NLQVLNLESNKLANVSQEVVAAWISLTTISLAGNMWDCGPGICPLVVWLKNFRGTKDTN- 333
Query: 559 VFCNSPAPLKYKSLISLS 576
+ C+SP L+ + +I S
Sbjct: 334 IICSSPKHLQGEKVIEAS 351
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 52/203 (25%), Positives = 87/203 (42%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N L ++ F +L L L + N + AF G+ RL L L ++ +
Sbjct: 63 LSLRYNDLHTMLPYQFAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLH 122
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F G+ LRSL L+ N+LQ + Q L +L+ L + NG + + F L+
Sbjct: 123 NVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEF 182
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
L++ G + L + + AF I L NL L L+ N +
Sbjct: 183 LDL-GYNRLRVLTRTAFLGLSRLMELHLEHNQFSR-INFFLFPRLANLRALYLQWNRIRA 240
Query: 324 FSESM-LAWPELRTIDIAENPIE 345
++ + +W L+ +DI+ N I+
Sbjct: 241 VNQGLPWSWYTLQRLDISGNEIQ 263
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 246 (91.7 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 92/342 (26%), Positives = 158/342 (46%)
Query: 19 PSRFS-TRDP-SCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDL 75
P R S +RDP N +L +P + +RL LS N++KT+ LS L+ +DL
Sbjct: 30 PQRCSCSRDPLEVNCSSRHLTAVPEGLPTNAKRLDLSGNQLKTLARRQFSSLSKLEDLDL 89
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
S +I + F+ + L L++ +N K P + + + RR++I +N I
Sbjct: 90 SENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFSGLSNLRRLDI-SENEILVFLDY 148
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F + L+ L +N L + +F+ L L EL V + T++ A + L L+ L
Sbjct: 149 TFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLR 208
Query: 194 LRGAGLTNISDNAFRGLSGLRSL-VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 252
LR ++ + +NAFR L LR+L +L + L+ + + L L L L + S +
Sbjct: 209 LRKLTISVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVGLN-LTTLVLTNCNLSAIPY 267
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
+ L+YL+ L+++ + +T ++ D IE GA GL
Sbjct: 268 SPLRHLAYLQYLDLS-YNPITSIQGNLLGDLLRLQELHLVGGNLLQ-IEPGAFRGLSRFR 325
Query: 313 HLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL 353
LN+ N ++ ES + L+T+ + NP+ C C +LW+
Sbjct: 326 LLNVSSNRLSTLEESAFHSVGNLQTLRLDRNPLACDCRLLWV 367
Score = 209 (78.6 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 79/284 (27%), Positives = 123/284 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL G L ++ F LS L L L++N + I + L L L I N +L
Sbjct: 63 LDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILP 122
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L+RL+I+ L + F D I + A VGL L
Sbjct: 123 VGVFSGLSNLRRLDISENEILVFLDY-TFRDMINLQQLDAGENDLVF-ISQRAFVGLQAL 180
Query: 312 YHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP 370
LN+ + TS +E++ L + + + I N + R + R + +S
Sbjct: 181 KELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAF-RRLHQLRTLQILHWSSL 239
Query: 371 APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 430
L SL+ L+ L L+ I + R L+ L+ L L+ N + SI L L R
Sbjct: 240 EMLNSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPITSIQGNLLGDLLR 299
Query: 431 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L+EL + +E G F+GLS + L ++ ++ L+ + + AF
Sbjct: 300 LQELHLVGGNLLQIEPGAFRGLSRFRLLNVS-SNRLSTLEESAF 342
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 72/322 (22%), Positives = 131/322 (40%)
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 294
T + L++ N L F LS L+ L+++ N+ + +
Sbjct: 58 TNAKRLDLSGNQLKTLARRQFSSLSKLEDLDLS--ENIISMIEVETFQGLKNLRYLRIKN 115
Query: 295 XXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPI-----ECGC 348
+ G GL NL L++ EN F + + L+ +D EN +
Sbjct: 116 NRLKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFV 175
Query: 349 NILWLREMLV-RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGL 407
+ L+E+ V R N +++ + + L+ SL L L ++ + +NAFR L L
Sbjct: 176 GLQALKELNVDRSNLTSIPTEALSQLQ--SLTKLRLRKLT-----ISVLPNNAFRRLHQL 228
Query: 408 RSL-VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
R+L +L + L+ + + L L L L + S + + L+YL+ L+++ + +
Sbjct: 229 RTLQILHWSSLEMLNSNSLVGLN-LTTLVLTNCNLSAIPYSPLRHLAYLQYLDLS-YNPI 286
Query: 467 TRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AW 525
T ++ D I E A GL LN+ N ++ ES +
Sbjct: 287 TSIQGNLLGDLLRLQELHLVGGNLLQI-EPGAFRGLSRFRLLNVSSNRLSTLEESAFHSV 345
Query: 526 PELRTIDIAENPIECGCNILWL 547
L+T+ + NP+ C C +LW+
Sbjct: 346 GNLQTLRLDRNPLACDCRLLWV 367
Score = 132 (51.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 57/244 (23%), Positives = 99/244 (40%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN-- 102
++Q+L N + + + L +L+ +++ + IP + L +L+L
Sbjct: 155 NLQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTI 214
Query: 103 KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
P + R ++I + + ++ GL L L L + L ++P +L
Sbjct: 215 SVLPNNAFRRLHQLRTLQILHWSSLEMLNSNSLVGLN-LTTLVLTNCNLSAIPYSPLRHL 273
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N T++ L RL L L G L I AFRGLS R L ++ NR
Sbjct: 274 AYLQYLDLSYNPITSIQGNLLGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRLLNVSSNR 333
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG----ASNLTRVRKG 278
L ++ + L+ L + +N + + + +RL+ G S L RK
Sbjct: 334 LSTLEESAFHSVGNLQTLRLDRNPLAC-DCRLLWVMRRRRRLDFDGRQPTCSPLNHQRK- 391
Query: 279 AFAD 282
AF D
Sbjct: 392 AFRD 395
Score = 37 (18.1 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 503 PNLYHLNLKENAFTSFSESML 523
P LN + AF FSE+ L
Sbjct: 381 PTCSPLNHQRKAFRDFSEAEL 401
Score = 37 (18.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 309 PNLYHLNLKENAFTSFSESML 329
P LN + AF FSE+ L
Sbjct: 381 PTCSPLNHQRKAFRDFSEAEL 401
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 243 (90.6 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 101/349 (28%), Positives = 157/349 (44%)
Query: 31 LQEANLDVIPSHSNPS--IQRLVLSTNRI-KTVDSAIPIYLSLQHVDLSHTTWLIIPIGG 87
L L+ IP+ + S I++L L+ N I K + + + SL+ +DLS+ I +
Sbjct: 105 LNNNELETIPNLGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNN--ISELRT 162
Query: 88 FEPQEKLVELQLNHNKHFPQQ--IVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
P +L L +N+N+ + ++ S V +NRIS I F+ L L+ L
Sbjct: 163 AFPPLQLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFK-LPQLQHLE 221
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L+ N++++V +F LG L L++ N T L DGAF GL + L L LT I+
Sbjct: 222 LNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKG 281
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
GL LR L L+ N + I +L EL++ N S L+ F GLS L L
Sbjct: 282 WLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALH 341
Query: 266 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE--GALVGLPNLYHLNLKENAFTS 323
I G + ++ + AF IE+ GA GL L L L+ N S
Sbjct: 342 I-GNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRS 400
Query: 324 FSESMLAWPE-LRTIDIAENPI-ECGCNILWLREML--VRRNTSAVFCN 368
++ A + L +D++ N I N + L + NTS++ C+
Sbjct: 401 ITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLLCD 449
Score = 209 (78.6 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 76/291 (26%), Positives = 133/291 (45%)
Query: 41 SHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLS-HTTWLIIPIGGFEPQEKLVELQL 99
SH S+Q + L+ N ++T+ + I +++ + L+ + I+P E + L L L
Sbjct: 95 SHLQ-SLQEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKILP-EQLEAFQSLETLDL 152
Query: 100 NHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA-LRILYLDDNQLRSVPTPS 158
++N + + + + I NR+S ++ F+ L + L +L L+ N++ ++P P
Sbjct: 153 SNNNISELRTAFPPLQLKYLYI-NNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIP-PK 210
Query: 159 FIYLGMLAELRVGLNVFTTLADG-AFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLV 217
L L L + N + DG F GLG L +L ++ G+T + D AF GLS + L
Sbjct: 211 MFKLPQLQHLELNRNKIKNV-DGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQ 269
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 277
L N L I L L L EL + QN + + ++ L L++T ++L+R+
Sbjct: 270 LDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLT-FNHLSRLDD 328
Query: 278 GAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM 328
+F I + A GL +L L+L+ N + E M
Sbjct: 329 SSFLGLSLLNALHIGNNKVSY-IADCAFRGLTSLKTLDLRNNEISWTIEDM 378
Score = 207 (77.9 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 103/384 (26%), Positives = 163/384 (42%)
Query: 94 LVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA-LRILYLDDNQL 151
+ L L+HN+ F Q S + + N + I ++A +R L L N +
Sbjct: 76 VTRLDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPN--LGSISANIRQLSLAGNAI 133
Query: 152 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGL- 210
+ L L + N + L AF L +L L + ++++ F L
Sbjct: 134 DKILPEQLEAFQSLETLDLSNNNISELRT-AFPPL-QLKYLYINNNRVSSMEPGYFDNLA 191
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S L L L NR+ +IP K KL +L+ LE+ +N ++ F+GL LK L++ +
Sbjct: 192 STLLVLKLNRNRISAIPPKMF-KLPQLQHLELNRNKIKNVDGLTFQGLGALKSLKMQ-RN 249
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
+T++ GAF I +G L GL L L+L +NA S A
Sbjct: 250 GVTKLMDGAFWGLSNMEVLQLDHNNLTE-ITKGWLYGLLMLRELHLSQNAINRISPD--A 306
Query: 331 WP---ELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP---APLKYKSLISLSAE 384
W +L +D+ N + + +L L+ N + N A ++ L SL
Sbjct: 307 WEFCQKLSELDLTFNHLSRLDDSSFLGLSLL--NALHIGNNKVSYIADCAFRGLTSLKTL 364
Query: 385 DLGCAGAGLTNISD--NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
DL T I D AF GL LR L+L NR++SI K + L LE L++ N
Sbjct: 365 DLRNNEISWT-IEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIM 423
Query: 443 MLEAGCFKGLSYLKRLEITGASNL 466
L++ F + L++L + +S L
Sbjct: 424 SLQSNAFSQMKKLQQLHLNTSSLL 447
Score = 193 (73.0 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 97/399 (24%), Positives = 169/399 (42%)
Query: 53 STNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCS 112
S R+ + +P +++ +DLSH I + L E++LN+N+ + S
Sbjct: 61 SRRRLVRLPDPLPAWVT--RLDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPNLGS 118
Query: 113 IISP-RRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 171
I + R++ + G N I +I E +L L L +N + + T +F L L L +
Sbjct: 119 ISANIRQLSLAG-NAIDKILPEQLEAFQSLETLDLSNNNISELRT-AFPPL-QLKYLYIN 175
Query: 172 LNVFTTLADGAFNGLGR-LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 230
N +++ G F+ L L L L ++ I F+ L L+ L L N+++++
Sbjct: 176 NNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFK-LPQLQHLELNRNKIKNVDGLT 234
Query: 231 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 290
L L+ L++ +NG + L G F GLS ++ L++ +NLT + KG +
Sbjct: 235 FQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDH-NNLTEITKG-WLYGLLMLREL 292
Query: 291 XXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES-MLAWPELRTIDIAENPI----E 345
I A L L+L N + +S L L + I N + +
Sbjct: 293 HLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIAD 352
Query: 346 CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLS 405
C L + L RN + + L L L G + +I+ AF GL
Sbjct: 353 CAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRL--RQLILQGNRIRSITKKAFAGLD 410
Query: 406 GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L L L+ N + S+ + S++ +L++L + N S+L
Sbjct: 411 TLEHLDLSGNAIMSLQSNAFSQMKKLQQLHL--NTSSLL 447
Score = 188 (71.2 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 101/442 (22%), Positives = 166/442 (37%)
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
LD ++ R V P + + L + N + + + + L L + L L I N
Sbjct: 58 LDCSRRRLVRLPDPLP-AWVTRLDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIP-N 115
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
+ +R L L N + I +QL LE L++ N S L F L LK L
Sbjct: 116 LGSISANIRQLSLAGNAIDKILPEQLEAFQSLETLDLSNNNISELRTA-FPPLQ-LKYLY 173
Query: 266 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
I + ++ + G F + I + LP L HL L N +
Sbjct: 174 INN-NRVSSMEPGYFDNLASTLLVLKLNRNRISAIPP-KMFKLPQLQHLELNRNKIKNVD 231
Query: 326 E-SMLAWPELRTIDIAENPI-ECGCNILW-LREMLVRRNTSAVFCNSPAPLKYKSLISLS 382
+ L+++ + N + + W L M V + Y L+ L
Sbjct: 232 GLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNLTEITKGWLY-GLLML- 289
Query: 383 AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
+L + + IS +A+ L L LT N L + L+ L L IG N S
Sbjct: 290 -RELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVS 348
Query: 443 MLEAGCFKGLSYLKRLEITGASNLTRVR--KGAFADXXXXXXXXXXXXXXXXIIEEDALV 500
+ F+GL+ LK L++ + GAF+ I ++ A
Sbjct: 349 YIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKK-AFA 407
Query: 501 GLPNLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 559
GL L HL+L NA S S + +L+ + + + + C C + WL + + N +
Sbjct: 408 GLDTLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLLCDCQLRWLPQWVAENNFQSF 467
Query: 560 F---CNSPAPLKYKSLISLSAE 578
C P LK +S+ ++S +
Sbjct: 468 VNASCAHPQLLKGRSIFTVSPD 489
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 235 (87.8 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 90/389 (23%), Positives = 151/389 (38%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
+D R LT++ + LR L N + +P K S RL +++ N S +
Sbjct: 330 VDCREKSLTSVPVTLPDDTTELR---LEQNFITELPPKSFSSFRRLRRIDLSNNNISRIA 386
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
GL L L + G + + + G F I + A L +L
Sbjct: 387 HDALSGLKQLTTLVLYG-NKIKDLPSGVFKGLGSLQLLLLNANEISC-IRKDAFRDLHSL 444
Query: 312 YHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCN 368
L+L +N S + A ++T+ +A+NP C CN+ WL + L + TS C
Sbjct: 445 SLLSLYDNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCE 504
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
SP + + + SL E C+ L R S ++ + + L ++
Sbjct: 505 SPKRMHRRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEI 564
Query: 429 TR-----LEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
R EL + N + + G F L +L +LE+ + LT + AF +
Sbjct: 565 PRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELK-RNQLTGIEPNAF-EGASHIQ 622
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECG 541
I +GL L LNL +N + S L ++++A NP C
Sbjct: 623 ELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 682
Query: 542 CNILWLREMLVRR--NTSAVFCNSPAPLK 568
C++ W E L ++ N A C +P+ ++
Sbjct: 683 CHLAWFAEWLRKKSLNGGAARCGAPSKVR 711
Score = 222 (83.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 75/295 (25%), Positives = 126/295 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+L+G LT I + F+ L+ LR L LTDN++ +I L LE L + N +
Sbjct: 105 LELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIP 164
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
+ L RL+I+ + +T V + F ++E A GL L
Sbjct: 165 ENFVTSSASLLRLDISN-NVITTVGRRVFKGAQSLRSLQLDNNQITC-LDEHAFKGLVEL 222
Query: 312 YHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N TS ++ LR + +++NP C C++ WL L A + C
Sbjct: 223 EILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAPYTRCQ 282
Query: 369 SPAPLKYKSLISLSAEDLGCAG--------AGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
SP+ LK +++ L ++ C+G G N + R G+ + + L S+
Sbjct: 283 SPSQLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADGI--VDCREKSLTSV 340
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
P T EL + QN + L F L+R++++ +N++R+ A +
Sbjct: 341 PVTLPDDTT---ELRLEQNFITELPPKSFSSFRRLRRIDLSN-NNISRIAHDALS 391
Score = 195 (73.7 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 101/406 (24%), Positives = 166/406 (40%)
Query: 72 HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRID 131
+VD SH +P E+L ELQ N+ + + R +++ N+I I+
Sbjct: 83 NVDCSHRGLTSVPRKISADVERL-ELQGNNLTVIYETDFQRLTKLRMLQLT-DNQIHTIE 140
Query: 132 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 191
+ F+ L +L L L++N+L+++P L L + NV TT+ F G L +
Sbjct: 141 RNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRS 200
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L +T + ++AF+GL L L L +N L S+P L RL L + N F+
Sbjct: 201 LQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFA--- 257
Query: 252 AGCFKGLSYLKRLEITGASNL---TRVR-----KGAFADXXXXXXXXXXXXXXXXXIEEG 303
C LS+L R + A+ L TR + KG +E G
Sbjct: 258 --CDCHLSWLSRF-LRSATRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLTEHAPMECG 314
Query: 304 ALVGLPNLYH-----LNLKENAFTSFSESMLA-WPELRTID--IAENPIECGCNILWLRE 355
A P+ ++ +E + TS ++ ELR I E P + + LR
Sbjct: 315 AENSCPHPCRCADGIVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRR 374
Query: 356 M-LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
+ L N S + ++ + LK + + L G + ++ F+GL L+ L+L
Sbjct: 375 IDLSNNNISRIAHDALSGLKQLTTLVLY-------GNKIKDLPSGVFKGLGSLQLLLLNA 427
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
N + I L L L + N L G F + +K + +
Sbjct: 428 NEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHL 473
Score = 185 (70.2 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 56/204 (27%), Positives = 87/204 (42%)
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
IS E L G LT I + F+ L+ LR L LTDN++ +I L LE L +
Sbjct: 98 ISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNN 157
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N + + L RL+I+ + +T V + F ++E A
Sbjct: 158 NRLKAIPENFVTSSASLLRLDISN-NVITTVGRRVFKGAQSLRSLQLDNNQIT-CLDEHA 215
Query: 499 LVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTS 557
GL L L L N TS ++ LR + +++NP C C++ WL L
Sbjct: 216 FKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRL 275
Query: 558 AVF--CNSPAPLKYKSLISLSAED 579
A + C SP+ LK +++ L ++
Sbjct: 276 APYTRCQSPSQLKGQNVADLHDQE 299
Score = 176 (67.0 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 76/346 (21%), Positives = 135/346 (39%)
Query: 239 ELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 297
EL + N + + G F L +L +LE+ + LT + AF +
Sbjct: 574 ELLLNDNELGRISSDGLFGRLPHLVKLELK-RNQLTGIEPNAF-EGASHIQELQLGENKI 631
Query: 298 XXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREM 356
I +GL L LNL +N + S L ++++A NP C C++ W E
Sbjct: 632 KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEW 691
Query: 357 LVRR--NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAF--RGLSGLRSLV- 411
L ++ N A C +P+ ++ + L + C+ + + + ++V
Sbjct: 692 LRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEGCLGDGYCPPSCTCTGTVVR 751
Query: 412 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 471
+ N+L+ IP + + T EL + N + + L L RL+++ + +T +
Sbjct: 752 CSRNQLKEIP-RGIPAET--SELYLESNEIEQIHYERIRHLRSLTRLDLSN-NQITILSN 807
Query: 472 GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRT 530
FA+ ++ AL GL NL L+L N + E S L
Sbjct: 808 YTFANLTKLSTLIISYNKLQ-CLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTH 866
Query: 531 IDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSLIS 574
I + NP+ C C + W + + C P +K K ++S
Sbjct: 867 IALGSNPLYCDCGLKWFSDWIKLDYVEPGIARCAEPEQMKDKLILS 912
Score = 123 (48.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
+DG F L L L+L+ LT I NAF G S ++ L L +N+++ I K L +L+
Sbjct: 587 SDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLK 646
Query: 239 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L + N S + G F+ L+ L L + ASN
Sbjct: 647 TLNLYDNQISCVMPGSFEHLNSLTSLNL--ASN 677
Score = 122 (48.0 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I+ + F LR + L +N + + + L L L + N L G F
Sbjct: 355 QNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVF 414
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GLG L L L ++ I +AFR L L L L DN +QS+ + ++ + +
Sbjct: 415 KGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLA 474
Query: 244 QNGF 247
+N F
Sbjct: 475 KNPF 478
Score = 97 (39.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 40/173 (23%), Positives = 67/173 (38%)
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N+L+ IP + + T EL + N + + L L RL+++ + +T + F
Sbjct: 755 NQLKEIP-RGIPAET--SELYLESNEIEQIHYERIRHLRSLTRLDLSN-NQITILSNYTF 810
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDI 339
A+ ++ AL GL NL L+L N + E S L I +
Sbjct: 811 ANLTKLSTLIISYNKLQC-LQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIAL 869
Query: 340 AENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSLISLSAEDLGCAG 390
NP+ C C + W + + C P +K K ++S + C G
Sbjct: 870 GSNPLYCDCGLKWFSDWIKLDYVEPGIARCAEPEQMKDKLILSTPSSSFVCRG 922
Score = 89 (36.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 121 IFGQNRISRIDQ-ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
+ N + RI F L L L L NQL + +F + EL++G N ++
Sbjct: 576 LLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEIS 635
Query: 180 DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
+ F GL +L L+L ++ + +F L+ L SL L N
Sbjct: 636 NKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 677
Score = 86 (35.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/80 (26%), Positives = 44/80 (55%)
Query: 116 PRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
P V++ +N+++ I+ FEG + ++ L L +N+++ + F+ L L L + N
Sbjct: 595 PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 654
Query: 175 FTTLADGAFNGLGRLSALDL 194
+ + G+F L L++L+L
Sbjct: 655 ISCVMPGSFEHLNSLTSLNL 674
Score = 85 (35.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
G+N+I I F GL L+ L L DNQ+ V SF +L L L + N F
Sbjct: 627 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 679
Score = 72 (30.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 35/153 (22%), Positives = 63/153 (41%)
Query: 26 DPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIP 84
D + +E +L +P L L N I + + + L+ +DLS+ I
Sbjct: 327 DGIVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIA 386
Query: 85 IGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
++L L L NK P + + S + + + N IS I + F L +L
Sbjct: 387 HDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLL-LLNANEISCIRKDAFRDLHSLS 445
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+L L DN ++S+ +F + + + + N F
Sbjct: 446 LLSLYDNNIQSLANGTFDAMKSIKTVHLAKNPF 478
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 240 (89.5 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 112/442 (25%), Positives = 181/442 (40%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L+ N + + F L L L++ N + + GAF+ + L L L L +
Sbjct: 73 LELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLP 132
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F+ L L L++N +Q+IP K T L+ L++ +N S +E G F+ L L+
Sbjct: 133 ELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEV 192
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
L + +N+T + +F L L FT
Sbjct: 193 LTLNN-NNITSIPVSSFNHMPKLRTFRLHSNHLFCDCH---LAWLAQWLRQRPTIGLFTQ 248
Query: 324 FSESMLAWPELRTIDIAE---NPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLIS 380
+ A +LR +++AE N C + L ++ + C PA + +
Sbjct: 249 CA----APAQLRGLNVAEIQKNEFSCSGQADGVHAQLCSLSSGS--C--PA------MCT 294
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS---KLTRLEEL--- 434
S + C G GLT I N ++ +R L N ++SIP S KL R+ L
Sbjct: 295 CSNGIVDCRGKGLTAIPANLPETMTEIR---LELNGIKSIPPGAFSPYKKLRRILPLGFR 351
Query: 435 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXII 494
++ N S + F+GL L L + G + +T + KG F +
Sbjct: 352 DLSNNQISEIAPDAFQGLRSLNSLVLYG-NKITDLPKGVFGGLFALQLLLLNANKIN-CV 409
Query: 495 EEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR 553
DA L NL L+L +N S ++ + + ++T+ +A+NP C CN+ WL + L R
Sbjct: 410 RADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCNLKWLADFL-R 468
Query: 554 RN---TSAVFCNSPAPLKYKSL 572
N TS C SP L K +
Sbjct: 469 ANPIETSGARCASPRRLANKRI 490
Score = 192 (72.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 114/463 (24%), Positives = 184/463 (39%)
Query: 30 NLQEANLDVIPSHS---NPSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPI 85
+L E + IP + ++ L L N+I + D A L+ + L++ IP+
Sbjct: 146 DLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPV 205
Query: 86 GGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQN-RISRIDQACFEG-LTALRI 143
F KL +L H+ H + C + Q I Q L L +
Sbjct: 206 SSFNHMPKLRTFRL-HSNH----LFCDCHLAWLAQWLRQRPTIGLFTQCAAPAQLRGLNV 260
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
+ N+ ++ L L G T + NG+ +D RG GLT I
Sbjct: 261 AEIQKNEFSCSGQADGVH-AQLCSLSSGSCPAMCTCS----NGI-----VDCRGKGLTAI 310
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLS---KLTRLEEL---EIGQNGFSMLEAGCFK 256
N ++ +R L N ++SIP S KL R+ L ++ N S + F+
Sbjct: 311 PANLPETMTEIR---LELNGIKSIPPGAFSPYKKLRRILPLGFRDLSNNQISEIAPDAFQ 367
Query: 257 GLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNL 316
GL L L + G + +T + KG F + A L NL L+L
Sbjct: 368 GLRSLNSLVLYG-NKITDLPKGVFGGLFALQLLLLNANKINC-VRADAFQDLQNLSLLSL 425
Query: 317 KENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAP 372
+N S ++ + + ++T+ +A+NP C CN+ WL + L R N TS C SP
Sbjct: 426 YDNKIQSLAKGTFTSLRAIQTLHLAQNPFVCDCNLKWLADFL-RANPIETSGARCASPRR 484
Query: 373 LKYKSLISLSAEDLGCAGAGLTNISDNAFRGL-SGLRSLVLTDNRLQS----IPTKQLSK 427
L K + + ++ C+ I L S S V+ + + + L K
Sbjct: 485 LANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPPKCRCEAGVVECSNL-K 543
Query: 428 LTRLEE--------LEIGQNGFSMLEA-GCFKGLSYLKRLEIT 461
LT++ E L + N S+LEA G FK L +LK++ ++
Sbjct: 544 LTKIPERIPQSTAELRLNNNEISILEATGIFKKLPHLKKINLS 586
Score = 171 (65.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 57/209 (27%), Positives = 86/209 (41%)
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
+ V C+ A I E L G +T I N F GL LR L L +N++ +
Sbjct: 50 TTVDCHGTALRAVPKSIPRGTERLELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVER 109
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
+ LE L + +N L F+ L RL+++ + + + + AF
Sbjct: 110 GAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLS-ENFIQAIPRKAFRGATDLKN 168
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECG 541
IE+ A L L L L N TS S P+LRT + N + C
Sbjct: 169 LQLDKNQIS-CIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSNHLFCD 227
Query: 542 CNILWLREMLVRRNTSAVF--CNSPAPLK 568
C++ WL + L +R T +F C +PA L+
Sbjct: 228 CHLAWLAQWLRQRPTIGLFTQCAAPAQLR 256
Score = 157 (60.3 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 47/149 (31%), Positives = 70/149 (46%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+E+ G N I+RI + F GL LR+L L +NQ+ V +F + L LR+ N T
Sbjct: 72 RLELNGNN-ITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHT 130
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
L + F LS LDL + I AFRG + L++L L N++ I L L
Sbjct: 131 LPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGL 190
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
E L + N + + F + L+ +
Sbjct: 191 EVLTLNNNNITSIPVSSFNHMPKLRTFRL 219
Score = 148 (57.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 37/122 (30%), Positives = 59/122 (48%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+IS +++ F+ + L L L+ NQL ++P F + L+ L + N + AF
Sbjct: 101 ENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHNQALSRLDLSENFIQAIPRKAF 160
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
G L L L ++ I D AFR L GL L L +N + SIP + + +L +
Sbjct: 161 RGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLH 220
Query: 244 QN 245
N
Sbjct: 221 SN 222
Score = 113 (44.8 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 41/162 (25%), Positives = 73/162 (45%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL 94
L +P +RL L+ N I + + L+ + L ++ G F+ ++L
Sbjct: 59 LRAVPKSIPRGTERLELNGNNITRIHKNDFSGLKQLRVLQLMENQISVVERGAFDDMKEL 118
Query: 95 VELQLNHNK-H-FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLR 152
L+LN N+ H P+ + + R+++ +N I I + F G T L+ L LD NQ+
Sbjct: 119 ERLRLNRNQLHTLPELLFQHNQALSRLDL-SENFIQAIPRKAFRGATDLKNLQLDKNQIS 177
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+ +F L L L + N T++ +FN + +L L
Sbjct: 178 CIEDGAFRALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRL 219
Score = 106 (42.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N++ + + F+ AL L L +N ++++P +F L L++ N + + DGAF
Sbjct: 125 RNQLHTLPELLFQHNQALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAF 184
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L L L +T+I ++F + LR+ L N L
Sbjct: 185 RALRGLEVLTLNNNNITSIPVSSFNHMPKLRTFRLHSNHL 224
Score = 103 (41.3 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 45/196 (22%), Positives = 74/196 (37%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEA 446
C+ LT I + + + LR L +N + + T KL L+++ + N S +E
Sbjct: 539 CSNLKLTKIPERIPQSTAELR---LNNNEISILEATGIFKKLPHLKKINLSNNKVSEIEG 595
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
G + G L R GA I D+ GL N+
Sbjct: 596 IHHAGAIGTNVGPLWGHP-LPASRAGAVFCWAQLQPLGMLRNNRISCIHNDSFTGLRNVR 654
Query: 507 HLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNS 563
L+L +N ++ + L T+++ NP C C + WL + L +R T C
Sbjct: 655 LLSLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQH 714
Query: 564 PAPLKYKSLISLSAED 579
P L+ L ++ D
Sbjct: 715 PDFLRQIPLQDVAFPD 730
Score = 97 (39.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 64/284 (22%), Positives = 111/284 (39%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKG 257
LT I + + + LR L +N + + T KL L+++ + N S +E G
Sbjct: 544 LTKIPERIPQSTAELR---LNNNEISILEATGIFKKLPHLKKINLSNNKVSEIEGIHHAG 600
Query: 258 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLK 317
+ G L R GA I + GL N+ L+L
Sbjct: 601 AIGTNVGPLWGHP-LPASRAGAVFCWAQLQPLGMLRNNRISCIHNDSFTGLRNVRLLSLY 659
Query: 318 ENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLK 374
+N ++ + L T+++ NP C C + WL + L +R T C P L+
Sbjct: 660 DNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQHPDFLR 719
Query: 375 YKSLISLSAEDLGCA-GAGLTNI--SDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTR 430
L ++ D C G T+ + + L ++V N+ L+++P + + K
Sbjct: 720 QIPLQDVAFPDFRCEEGQEETSCIPRPQCPQECTCLDTVVRCSNKHLKALP-RGIPK--N 776
Query: 431 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ EL + N F+ + G YL+ L I ++L + AF
Sbjct: 777 VTELYLDGNQFTQVP-GQLSTFKYLQ-LVILSYNSLQCIPPLAF 818
Score = 76 (31.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 33/150 (22%), Positives = 59/150 (39%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 249
+ +D G L + + RG L L N + I S L +L L++ +N S+
Sbjct: 50 TTVDCHGTALRAVPKSIPRGTERLE---LNGNNITRIHKNDFSGLKQLRVLQLMENQISV 106
Query: 250 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP 309
+E G F + L+RL + + L + + F I A G
Sbjct: 107 VERGAFDDMKELERLRLN-RNQLHTLPELLF-QHNQALSRLDLSENFIQAIPRKAFRGAT 164
Query: 310 NLYHLNLKENAFTSFSESMLAWPELRTIDI 339
+L +L L +N + + A+ LR +++
Sbjct: 165 DLKNLQLDKNQISCIEDG--AFRALRGLEV 192
Score = 65 (27.9 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 22/75 (29%), Positives = 35/75 (46%)
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
LR ++ I +++F GL +R L L DN++ +I L L L + N F+
Sbjct: 634 LRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQL 693
Query: 254 CFKGLSYLKRLEITG 268
+ G KR +TG
Sbjct: 694 AWLGDWLRKRKIVTG 708
Score = 47 (21.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 501 GLP-NLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC 540
G+P N+ L L N FT + + L+ + ++ N ++C
Sbjct: 772 GIPKNVTELYLDGNQFTQVPGQLSTFKYLQLVILSYNSLQC 812
>WB|WBGene00022789 [details] [associations]
symbol:lron-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00700000104056 OMA:AMIKIGQ HSSP:P07359 EMBL:FO081193
PIR:T29972 RefSeq:NP_505402.1 ProteinModelPortal:Q23580 SMR:Q23580
STRING:Q23580 PaxDb:Q23580 EnsemblMetazoa:ZK682.5 GeneID:179309
KEGG:cel:CELE_ZK682.5 UCSC:ZK682.5 CTD:179309 WormBase:ZK682.5
eggNOG:NOG280691 HOGENOM:HOG000021591 InParanoid:Q23580
NextBio:904832 Uniprot:Q23580
Length = 575
Score = 236 (88.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 104/420 (24%), Positives = 186/420 (44%)
Query: 28 SCNLQEANLDVIPSHSNPS--IQRLVLSTNRIKTVDSAI---PIYLSLQHVDLSHTTWLI 82
S + + + IP+++ S I RLVL+ N ++ +D P+ SL +DL+
Sbjct: 63 SLTILDTAIPTIPANAFQSFTILRLVLNRNTLQNIDDQAFNGPLLDSLIELDLNDNNLGQ 122
Query: 83 IPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPR----RVEIFGQNRISRI---DQAC 134
IP G L +L LN N+ + + R ++E+ G NR++ D
Sbjct: 123 IPQTGIPRLRNLRKLYLNRNRINQLSSTAFNAFESRDLLLKLELAG-NRLTDATLGDATV 181
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFI-YLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F LT L+ L L+ N L S+P+ + + L L +GLN + GA + LS+L
Sbjct: 182 FRPLTLLQELSLETNSLTSIPSSALVNQRNTLTNLNLGLNSINEVPVGALD-FPVLSSLS 240
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
L G+T I AF+G+ L+ L +T N+ S + +T+L+ L IG+ S++
Sbjct: 241 LEFNGITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMFRYITQLKTLGIGETPISVIPNN 300
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYH 313
F + L RLE++ A+ + + +GAF + GL +LY
Sbjct: 301 AFMHIPNLIRLEMSEAA-VDTIERGAF-QRTPQIQAIVLNKNRLSQVRADFFEGLNDLYS 358
Query: 314 LNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CNSP 370
++L+ N + A P + +DI+ N ++ + ++ L + N V C +P
Sbjct: 359 IDLQGNRIDNVQPLGFANLPAISHLDISYNLLQTMPSNVFQNSFLPQPNDRRVIYACGNP 418
Query: 371 ----APLK-YKSLI----SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 421
+ L+ +++L+ + E GC ++ + G + LRS+ N ++ P
Sbjct: 419 WYCNSELEWFRTLLRDNLDIDVEKPGCTAVCTSSPNGCPVEG-TPLRSVDFCQNNEEAQP 477
Score = 156 (60.0 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 76/314 (24%), Positives = 128/314 (40%)
Query: 177 TLADGAFNGLGRLSALDLRGAGLTNISDNAFRG--LSGLRSLVLTDNRLQSIPTKQLSKL 234
T+ AF L L L L NI D AF G L L L L DN L IP + +L
Sbjct: 73 TIPANAFQSFTILR-LVLNRNTLQNIDDQAFNGPLLDSLIELDLNDNNLGQIPQTGIPRL 131
Query: 235 TRLEELEIGQNGFSMLEA---GCFKGLSYLKRLEITGASNLTRVRKG---AFADXXXXXX 288
L +L + +N + L + F+ L +LE+ G + LT G F
Sbjct: 132 RNLRKLYLNRNRINQLSSTAFNAFESRDLLLKLELAG-NRLTDATLGDATVFRPLTLLQE 190
Query: 289 XXXXXXXXXXXIEEGALVGLPN-LYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECG 347
I ALV N L +LNL N+ L +P L ++ + N G
Sbjct: 191 LSLETNSLTS-IPSSALVNQRNTLTNLNLGLNSINEVPVGALDFPVLSSLSLEFN----G 245
Query: 348 CNILWLREMLVRRNTSAVFCNS---P--APLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
++ + N ++ P AP ++ + L LG ++ I +NAF
Sbjct: 246 ITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMFRYITQLKT--LGIGETPISVIPNNAFM 303
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
+ L L +++ + +I + +++ + + +N S + A F+GL+ L +++ G
Sbjct: 304 HIPNLIRLEMSEAAVDTIERGAFQRTPQIQAIVLNKNRLSQVRADFFEGLNDLYSIDLQG 363
Query: 463 ASNLTRVRKGAFAD 476
+ + V+ FA+
Sbjct: 364 -NRIDNVQPLGFAN 376
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 83/352 (23%), Positives = 141/352 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I I A + +L IL D + ++P +F +L L + N + D AF
Sbjct: 47 QNAIQAIQAARDIPIDSLTIL---DTAIPTIPANAFQSFTIL-RLVLNRNTLQNIDDQAF 102
Query: 184 NG--LGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL-TR--LE 238
NG L L LDL L I L LR L L NR+ + + + +R L
Sbjct: 103 NGPLLDSLIELDLNDNNLGQIPQTGIPRLRNLRKLYLNRNRINQLSSTAFNAFESRDLLL 162
Query: 239 ELEIGQNGFS---MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXX 295
+LE+ N + + +A F+ L+ L+ L + ++LT + A +
Sbjct: 163 KLELAGNRLTDATLGDATVFRPLTLLQELSLE-TNSLTSIPSSALVNQRNTLTNLNLGLN 221
Query: 296 XXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPI-----ECGCN 349
+ GAL P L L+L+ N T ++ P L+ + + N E
Sbjct: 222 SINEVPVGAL-DFPVLSSLSLEFNGITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMFRY 280
Query: 350 ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRS 409
I L+ + + +V N+ A + +LI L + A + I AF+ +++
Sbjct: 281 ITQLKTLGIGETPISVIPNN-AFMHIPNLIRLEMSE-----AAVDTIERGAFQRTPQIQA 334
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
+VL NRL + L L +++ N ++ F L + L+I+
Sbjct: 335 IVLNKNRLSQVRADFFEGLNDLYSIDLQGNRIDNVQPLGFANLPAISHLDIS 386
Score = 128 (50.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 43/176 (24%), Positives = 79/176 (44%)
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
G+T I AF+G+ L+ L +T N+ S + +T+L+ L IG+ S++ F
Sbjct: 245 GITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMFRYITQLKTLGIGETPISVIPNNAFMH 304
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLK 511
+ L RLE++ A+ + + +GAF + D GL +LY ++L+
Sbjct: 305 IPNLIRLEMSEAA-VDTIERGAFQRTPQIQAIVLNKNRLSQV-RADFFEGLNDLYSIDLQ 362
Query: 512 ENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CNSP 564
N + A P + +DI+ N ++ + ++ L + N V C +P
Sbjct: 363 GNRIDNVQPLGFANLPAISHLDISYNLLQTMPSNVFQNSFLPQPNDRRVIYACGNP 418
>MGI|MGI:2156367 [details] [associations]
symbol:Tlr3 "toll-like receptor 3" species:10090 "Mus
musculus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0002224 "toll-like receptor
signaling pathway" evidence=ISO] [GO:0002282 "microglial cell
activation involved in immune response" evidence=ISO] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006952 "defense
response" evidence=IMP] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=ISO] [GO:0009615
"response to virus" evidence=IMP] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032481 "positive
regulation of type I interferon production" evidence=IDA]
[GO:0032722 "positive regulation of chemokine production"
evidence=ISO] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IDA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISO;IMP;IDA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=ISO] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IDA;IMP] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=ISO]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IDA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=ISO] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IGI;IDA;IMP]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP] [GO:0043331
"response to dsRNA" evidence=ISO] [GO:0045078 "positive regulation
of interferon-gamma biosynthetic process" evidence=ISO] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IMP] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=ISO] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP] [GO:0051607
"defense response to virus" evidence=IGI;TAS] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=ISO] [GO:0071360
"cellular response to exogenous dsRNA" evidence=ISO] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027173
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
MGI:MGI:2156367 GO:GO:0016021 GO:GO:0009986 GO:GO:0005789
GO:GO:0043123 GO:GO:0006954 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0004872
GO:GO:0051607 GO:GO:0010008 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 GO:GO:0003725 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 GO:GO:0001934 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0002224
GO:GO:0052033 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0002282 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0071360 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 HOGENOM:HOG000251618 OMA:IANINDD
GO:GO:0045356 GO:GO:0034346 EMBL:AF420279 EMBL:AF355152
EMBL:AK083977 IPI:IPI00320618 RefSeq:NP_569054.2 UniGene:Mm.33874
PDB:3CIG PDB:3CIY PDBsum:3CIG PDBsum:3CIY ProteinModelPortal:Q99MB1
SMR:Q99MB1 STRING:Q99MB1 PhosphoSite:Q99MB1 PaxDb:Q99MB1
PRIDE:Q99MB1 Ensembl:ENSMUST00000034056 Ensembl:ENSMUST00000167106
GeneID:142980 KEGG:mmu:142980 UCSC:uc009loy.1 eggNOG:NOG265249
InParanoid:Q99MB1 EvolutionaryTrace:Q99MB1 NextBio:370067
Bgee:Q99MB1 CleanEx:MM_TLR3 Genevestigator:Q99MB1
GermOnline:ENSMUSG00000031639 Uniprot:Q99MB1
Length = 905
Score = 239 (89.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 143/569 (25%), Positives = 228/569 (40%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL---SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNH- 101
++Q L+L+ N+I + S +L SL+ +DLS G F+ KL L LN+
Sbjct: 173 NLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNA 232
Query: 102 --NKHFPQQIVCSIISPRRVE--IFGQNRISRIDQACFEGL--TALRILYLDDNQLRSVP 155
N H +++ C +S ++ N++ ++ F GL T L L L N L V
Sbjct: 233 QLNPHLTEKL-CWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVG 291
Query: 156 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA------GLT---NISDNA 206
SF YL L L + N L+ +F GL L L L+ A L NI D +
Sbjct: 292 NGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFS 351
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM--LEAGCFKGLSYLKRL 264
F+ L L L + DN + S + + L L+ L + + S+ L F L++ L
Sbjct: 352 FQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLL 411
Query: 265 EITGASN-LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
+ N ++++ G F+ + GL N++ + L N +
Sbjct: 412 TLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQ 471
Query: 324 FSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLS 382
S S A P L+ L LR + ++ N SP+P ++ L +L+
Sbjct: 472 LSTSSFALVPSLQR--------------LMLRRVALK-NVDI----SPSP--FRPLRNLT 510
Query: 383 AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI--------PTKQLSKLTRLEEL 434
DL + + NI+++ GL L L N L + P L L+ L L
Sbjct: 511 ILDL--SNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHIL 568
Query: 435 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXII 494
+ NG + G FK L LK + + G +NL ++ F D +
Sbjct: 569 NLESNGLDEIPVGVFKNLFELKSINL-GLNNLNKLEPFIFDDQTSLRSLNLQKNLITSV- 626
Query: 495 EEDALVGLP--NLYHLNLKENAFTSFSESM---LAWPELRTIDIAENPIECGCNIL--WL 547
E+D G P NL L+++ N F ES+ + W +I+E CN +
Sbjct: 627 EKDVF-GPPFQNLNSLDMRFNPFDCTCESISWFVNWINQTHTNISELSTHYLCNTPHHYY 685
Query: 548 REMLVRRNTSAVFCNSPAPLKYKSLISLS 576
L +TS+ C AP + +IS S
Sbjct: 686 GFPLKLFDTSS--CKDSAPFELLFIISTS 712
Score = 176 (67.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 92/419 (21%), Positives = 161/419 (38%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N IS+++ + L L++L L N+L + +F++ L EL + N +
Sbjct: 84 GFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNP 143
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL--TRLEEL 240
F L LDL GL++ L L+ L+L N++ ++ +++L L + L +L
Sbjct: 144 FKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKL 203
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGAS-NLTRVRKGAFADXXXXXXXXXXXXXXXXX 299
++ N GCF+ + L L + A N K +
Sbjct: 204 DLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLA 263
Query: 300 IEEGALVGLP--NLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREM 356
E GL NL L+L N ++ P LR + + N NI +
Sbjct: 264 TSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYN------NI----QR 313
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNR 416
L R+ + + L+Y SL + + A NI D +F+ L L L + DN
Sbjct: 314 LSPRSFYGL-----SNLRYLSLKRAFTKQ-SVSLASHPNIDDFSFQWLKYLEYLNMDDNN 367
Query: 417 LQSIPTKQLSKLTRLEELEIGQNGFSM--LEAGCFKGLSYLKRLEITGASN-LTRVRKGA 473
+ S + + L L+ L + + S+ L F L++ L + N ++++ G
Sbjct: 368 IPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGT 427
Query: 474 FADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTI 531
F+ + GL N++ + L N + S S A P L+ +
Sbjct: 428 FSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRL 486
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 80/338 (23%), Positives = 134/338 (39%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N++ R+ F + L IL N + + L +L L + N + ++D F
Sbjct: 62 NQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFV 121
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L+ LDL + I N F+ L L L+ N L S +L L+EL + +
Sbjct: 122 FCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAK 181
Query: 245 NGFSML--EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
N L E F G S L++L+++ ++ L G F + E
Sbjct: 182 NKILALRSEELEFLGNSSLRKLDLS-SNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTE 240
Query: 303 GALVGLPN--LYHLNLKENAFTSFSESM---LAWPELRTIDIAENPI-ECG--------- 347
L N + +L+L N + SES L W L +D++ N + + G
Sbjct: 241 KLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPS 300
Query: 348 CNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGL 407
L L ++R + F + L+Y SL + + A NI D +F+ L L
Sbjct: 301 LRYLSLEYNNIQRLSPRSFYGL-SNLRYLSLKRAFTKQ-SVSLASHPNIDDFSFQWLKYL 358
Query: 408 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 445
L + DN + S + + L L+ L + + F+ L+
Sbjct: 359 EYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKT-FTSLQ 395
Score = 121 (47.7 bits), Expect = 0.00094, P = 0.00094
Identities = 60/234 (25%), Positives = 95/234 (40%)
Query: 45 PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P ++ L L N + + D +L +DL + I F+ Q+ L++L L+HN
Sbjct: 100 PLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNG 159
Query: 104 HFPQQIVCSIISPRRVEIF-GQNRIS--RIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
++ + E+ +N+I R ++ F G ++LR L L N L+ F
Sbjct: 160 LSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQ 219
Query: 161 YLGMLAELRVG-LNVFTTLADGAFNGLGRLSA--LDLRGAGLTNISDNAFRGL--SGLRS 215
+G L L + + L + L S L L L S++ F GL + L
Sbjct: 220 TIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQ 279
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L L+ N L + S L L L + N L F GLS L+ L + A
Sbjct: 280 LDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRA 333
>UNIPROTKB|P40197 [details] [associations]
symbol:GP5 "Platelet glycoprotein V" species:9606 "Homo
sapiens" [GO:0005518 "collagen binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0010544 "negative
regulation of platelet activation" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0007597 "blood
coagulation, intrinsic pathway" evidence=TAS] [GO:0030168 "platelet
activation" evidence=TAS] Reactome:REACT_604 Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030168 GO:GO:0005887
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007597 GO:GO:0007155 GO:GO:0007160
InterPro:IPR000372 SMART:SM00013 GO:GO:0010544 EMBL:L11238
EMBL:Z23091 IPI:IPI00027410 PIR:A48030 RefSeq:NP_004479.1
UniGene:Hs.73734 ProteinModelPortal:P40197 SMR:P40197 STRING:P40197
PhosphoSite:P40197 DMDM:729616 PaxDb:P40197 PeptideAtlas:P40197
PRIDE:P40197 DNASU:2814 Ensembl:ENST00000323007
Ensembl:ENST00000401815 GeneID:2814 KEGG:hsa:2814 UCSC:uc003ftv.1
CTD:2814 GeneCards:GC03M194115 HGNC:HGNC:4443 MIM:173511
neXtProt:NX_P40197 PharmGKB:PA28823 HOGENOM:HOG000112798
HOVERGEN:HBG005906 InParanoid:P40197 KO:K06260 OMA:AMIKIGQ
OrthoDB:EOG4JHCFD PhylomeDB:P40197 GenomeRNAi:2814 NextBio:11093
PMAP-CutDB:P40197 ArrayExpress:P40197 Bgee:P40197 CleanEx:HS_GP5
Genevestigator:P40197 GermOnline:ENSG00000178732 Uniprot:P40197
Length = 560
Score = 230 (86.0 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 91/351 (25%), Positives = 146/351 (41%)
Query: 121 IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 180
+FG R + F G+T L+ L + D+ + +V +F L L LR+ N T L
Sbjct: 57 LFGMGR-GVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPG 115
Query: 181 GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
+ + L L L L I N F+ L L+ L L N+L +P + L L+ L
Sbjct: 116 ALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLL 175
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
++ N + L G + L+RL + ++ L + G + I
Sbjct: 176 DLSGNNLTHLPKGLLGAQAKLERL-LLHSNRLVSLDSGLL-NSLGALTELQFHRNHIRSI 233
Query: 301 EEGALVGLPNLYHLNLKENAFTSFSESM-LAWPELRTIDIAENPI---------ECG-CN 349
GA LPNL L L N ++ L L + + ENP+ E G
Sbjct: 234 APGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPGVLFGEMGGLQ 293
Query: 350 ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRS 409
LWL +R +A F N + L+Y ++LS L+ + AF+GL L+
Sbjct: 294 ELWLNRTQLRTLPAAAFRNL-SRLRYLG-VTLSPR--------LSALPQGAFQGLGELQV 343
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
L L N L ++P L L +L ++ + +N L F+ LS L+ +++
Sbjct: 344 LALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQL 394
Score = 202 (76.2 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 74/303 (24%), Positives = 131/303 (43%)
Query: 47 IQRLVLSTNRIKTVDSAI-PIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-- 103
++ L LS N+I + A+ + L+ + L H I F+ L EL LN N+
Sbjct: 100 LKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQNMFQKLVNLQELALNQNQLD 159
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
P + ++ + + +++ G N ++ + + L L L N+L S+ + LG
Sbjct: 160 FLPASLFTNLENLKLLDLSGNN-LTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLG 218
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L EL+ N ++A GAF+ L LS+L L L + F L L L +N L
Sbjct: 219 ALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPL 278
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADX 283
+P ++ L+EL + + L A F+ LS L+ L +T + L+ + +GAF
Sbjct: 279 AELPGVLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAF-QG 337
Query: 284 XXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAEN 342
+ +G L GL L ++L+ N + ++ L ++ + N
Sbjct: 338 LGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHN 397
Query: 343 PIE 345
+E
Sbjct: 398 QLE 400
Score = 174 (66.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 88/350 (25%), Positives = 136/350 (38%)
Query: 121 IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 180
+ + IS + F L L+ L L N++ +P + +L +L + N +
Sbjct: 80 MISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQ 139
Query: 181 GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
F L L L L L + + F L L+ L L+ N L +P L +LE L
Sbjct: 140 NMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQAKLERL 199
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
+ N L++G L L L+ +++ + GAF D +
Sbjct: 200 LLHSNRLVSLDSGLLNSLGALTELQFH-RNHIRSIAPGAF-DRLPNLSSLT--------L 249
Query: 301 EEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRR 360
L LP+ L+ + E+ LA EL + E G LWL +R
Sbjct: 250 SRNHLAFLPSALFLHSHNLTLLTLFENPLA--ELPGVLFGEMG---GLQELWLNRTQLRT 304
Query: 361 NTSAVFCNSPAPLKYKSL-IS--LSA------EDLG------CAGAGLTNISDNAFRGLS 405
+A F N + L+Y + +S LSA + LG GLT + D RGL
Sbjct: 305 LPAAAFRNL-SRLRYLGVTLSPRLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLG 363
Query: 406 GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 455
LR + L NRL+++P L+ LE +++ N L F L L
Sbjct: 364 KLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLETLPGDVFGALPRL 413
Score = 157 (60.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 64/242 (26%), Positives = 104/242 (42%)
Query: 46 SIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
++ L N I+++ A +L + LS +P F L L L N
Sbjct: 219 ALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPL 278
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLD-DNQLRSVPTPSFIY 161
P + + + + + + ++ + A F L+ LR L + +L ++P +F
Sbjct: 279 AELPGVLFGEMGGLQELWL-NRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQG 337
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
LG L L + N T L DG GLG+L + LR L + FR LS L S+ L N
Sbjct: 338 LGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHN 397
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR-LEITGASNLTRVR-KGA 279
+L+++P L RL E+ +G N + + G L +L++ L + G R GA
Sbjct: 398 QLETLPGDVFGALPRLTEVLLGHNSWRC-DCGLGPFLGWLRQHLGLVGGEEPPRCAGPGA 456
Query: 280 FA 281
A
Sbjct: 457 HA 458
Score = 146 (56.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 50/188 (26%), Positives = 78/188 (41%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRI 127
LQ + +S + + G F KL L+L+ NK H P ++ ++ ++ N +
Sbjct: 76 LQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQL-FLDHNAL 134
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
IDQ F+ L L+ L L+ NQL +P F L L L + N T L G
Sbjct: 135 RGIDQNMFQKLVNLQELALNQNQLDFLPASLFTNLENLKLLDLSGNNLTHLPKGLLGAQA 194
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
+L L L L ++ L L L N ++SI +L L L + +N
Sbjct: 195 KLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHL 254
Query: 248 SMLEAGCF 255
+ L + F
Sbjct: 255 AFLPSALF 262
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 76/358 (21%), Positives = 143/358 (39%)
Query: 189 LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248
L+ + L G G + +F G++ L+ L+++D+ + ++ S L +L+ L + +N +
Sbjct: 52 LTHILLFGMGRGVLQSQSFSGMTVLQRLMISDSHISAVAPGTFSDLIKLKTLRLSRNKIT 111
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
L + L++L + + L + + F + L
Sbjct: 112 HLPGALLDKMVLLEQLFLDHNA-LRGIDQNMF-QKLVNLQELALNQNQLDFLPASLFTNL 169
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAEN---PIECGC-NILW-LREMLVRRNT 362
NL L+L N T + +L A +L + + N ++ G N L L E+ RN
Sbjct: 170 ENLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRN- 228
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
S AP + L +LS+ L + L + F L L L +N L +P
Sbjct: 229 ---HIRSIAPGAFDRLPNLSS--LTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELPG 283
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
++ L+EL + + L A F+ LS L+ L +T + L+ + +GAF
Sbjct: 284 VLFGEMGGLQELWLNRTQLRTLPAAAFRNLSRLRYLGVTLSPRLSALPQGAFQGLGELQV 343
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
+ + L GL L ++L+ N + ++ L ++ + N +E
Sbjct: 344 LALHSNGLTAL-PDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLE 400
Score = 79 (32.9 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR-LE 459
FR LS L S+ L N+L+++P L RL E+ +G N + + G L +L++ L
Sbjct: 383 FRNLSSLESVQLDHNQLETLPGDVFGALPRLTEVLLGHNSWRC-DCGLGPFLGWLRQHLG 441
Query: 460 ITGASNLTRVR-KGAFA 475
+ G R GA A
Sbjct: 442 LVGGEEPPRCAGPGAHA 458
>UNIPROTKB|F1NF14 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0070100
Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
OMA:SVDCHGL EMBL:AADN02035923 IPI:IPI00587174
Ensembl:ENSGALT00000002967 ArrayExpress:F1NF14 Uniprot:F1NF14
Length = 1338
Score = 240 (89.5 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 89/364 (24%), Positives = 159/364 (43%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 249
+ +D RG GLT I N + +R L N ++ IP ++ +L+ ++I +N S
Sbjct: 103 NVVDCRGRGLTEIPANLPEDIWEIR---LEQNLIKVIPPGAFTQYKKLKRIDISKNQISE 159
Query: 250 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP 309
+ FKGL L L + G + +T + +G F D + GL
Sbjct: 160 IAPDAFKGLKSLISLVLYG-NKITEIPQGLF-DDLVSLQLLLLNANKINCLRVNTFQGLH 217
Query: 310 NLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWLREMLVRR--NTSAV 365
NL L+L +N + S+ + A P ++T+ +A+NP C C++ WL + L TS
Sbjct: 218 NLKLLSLYDNKLQTISKGLFA-PLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGA 276
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAG--LTNISDNAFRGL---SGLR---SLVLTDN-R 416
C++P L K + + ++ C+G+ + + F L R ++V N +
Sbjct: 277 RCSNPRRLANKRISQIKSKKFRCSGSEDYRSKFTGKCFMDLVCPEKCRCEGTVVDCSNQK 336
Query: 417 LQSIPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFA 475
L +P+ L + T +L + N S+LEA G FK L L+++ ++ + + +R+G F
Sbjct: 337 LTRLPS-HLPEYTT--DLRLNDNDISVLEAIGLFKKLPNLRKINLSN-NKIKEIREGTF- 391
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIA 534
D + GL L L L+ N+ + + A +R + +
Sbjct: 392 DGASGVQELILTENQLESVHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLY 451
Query: 535 ENPI 538
+N I
Sbjct: 452 DNHI 455
Score = 183 (69.5 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 55/214 (25%), Positives = 97/214 (45%)
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
S + + S + S + C G GLT I N + +R L N ++ IP ++
Sbjct: 88 SASSITCPSACTCSNNVVDCRGRGLTEIPANLPEDIWEIR---LEQNLIKVIPPGAFTQY 144
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 488
+L+ ++I +N S + FKGL L L + G + +T + +G F D
Sbjct: 145 KKLKRIDISKNQISEIAPDAFKGLKSLISLVLYG-NKITEIPQGLF-DDLVSLQLLLLNA 202
Query: 489 XXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILW 546
+ + GL NL L+L +N + S+ + A P ++T+ +A+NP C C++ W
Sbjct: 203 NKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFA-PLRSIQTLHLAQNPFVCDCHLKW 261
Query: 547 LREMLVRR--NTSAVFCNSPAPLKYKSLISLSAE 578
L + L TS C++P L K + + ++
Sbjct: 262 LADYLQDNPIETSGARCSNPRRLANKRISQIKSK 295
Score = 162 (62.1 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 81/370 (21%), Positives = 143/370 (38%)
Query: 216 LVLTDNRLQSIPTKQL-SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L DN + + L KL L ++ + N + G F G S ++ L +T + L
Sbjct: 351 LRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILT-ENQLES 409
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PE 333
V G I GL ++ L+L +N ++ + +
Sbjct: 410 VH-GRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVS 468
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
L TI++ N C C++ WL + L ++ + C P LK + + A+D C G
Sbjct: 469 LSTINLLANSFNCNCHLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDAQDFTCEGN 528
Query: 392 GLTN--ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
++ +S + + S+V N+ + K + K + EL + N + +
Sbjct: 529 DESSCLLSPPCPSQCTCVDSVVRCSNKGLRVMPKGIPK--DVTELYLEGNHLTAVP---- 582
Query: 450 KGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
KGLS + L + SN ++ + F++ I A GL +L
Sbjct: 583 KGLSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLR-CIPVHAFNGLRSLRV 641
Query: 508 LNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSP 564
L L N +S E S L + + NP+ C CN+ WL E + + C+ P
Sbjct: 642 LTLHGNDISSVPEGSFNDLVSLSHLALGTNPLHCDCNLRWLSEWVKAGYKEPGIARCSGP 701
Query: 565 APLKYKSLIS 574
+ + L++
Sbjct: 702 EAMVDRLLLT 711
Score = 147 (56.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 37/115 (32%), Positives = 58/115 (50%)
Query: 167 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 226
E+R+ N+ + GAF +L +D+ ++ I+ +AF+GL L SLVL N++ I
Sbjct: 125 EIRLEQNLIKVIPPGAFTQYKKLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNKITEI 184
Query: 227 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
P L L+ L + N + L F+GL LK L + + L + KG FA
Sbjct: 185 PQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYD-NKLQTISKGLFA 238
Score = 137 (53.3 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 35/116 (30%), Positives = 62/116 (53%)
Query: 167 ELRVGLNVFTTL-ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 225
+LR+ N + L A G F L L ++L + I + F G SG++ L+LT+N+L+S
Sbjct: 350 DLRLNDNDISVLEAIGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLES 409
Query: 226 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
+ + LT L+ L + N S + F GLS ++ L + ++++ + GAF+
Sbjct: 410 VHGRMFRGLTGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYD-NHISTITPGAFS 464
Score = 125 (49.1 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I I F L+ + + NQ+ + +F L L L + N T + G F
Sbjct: 130 QNLIKVIPPGAFTQYKKLKRIDISKNQISEIAPDAFKGLKSLISLVLYGNKITEIPQGLF 189
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+ L L L L + + N F+GL L+ L L DN+LQ+I + L ++ L +
Sbjct: 190 DDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFAPLRSIQTLHLA 249
Query: 244 QNGF 247
QN F
Sbjct: 250 QNPF 253
Score = 115 (45.5 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 41/160 (25%), Positives = 73/160 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSH 77
PS + + + + L IP++ I + L N IK + A Y L+ +D+S
Sbjct: 95 PSACTCSNNVVDCRGRGLTEIPANLPEDIWEIRLEQNLIKVIPPGAFTQYKKLKRIDISK 154
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACF 135
I F+ + L+ L L NK PQ + ++S + + + N+I+ + F
Sbjct: 155 NQISEIAPDAFKGLKSLISLVLYGNKITEIPQGLFDDLVSLQLL-LLNANKINCLRVNTF 213
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
+GL L++L L DN+L+++ F L + L + N F
Sbjct: 214 QGLHNLKLLSLYDNKLQTISKGLFAPLRSIQTLHLAQNPF 253
Score = 94 (38.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 27/102 (26%), Positives = 48/102 (47%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N T + G + L+ +DL ++ +++ F ++ L +L+L+ NRL+
Sbjct: 568 VTELYLEGNHLTAVPKG-LSAFRHLTLIDLSNNSISVLANYTFSNMTQLSTLILSYNRLR 626
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
IP + L L L + N S + G F L L L +
Sbjct: 627 CIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDLVSLSHLAL 668
>ZFIN|ZDB-GENE-041210-129 [details] [associations]
symbol:lrrc4.1 "leucine rich repeat containing 4.1"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041210-129 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
InterPro:IPR026882 PANTHER:PTHR24369:SF9 EMBL:BX855622
UniGene:Dr.114688 UniGene:Dr.159965 Ensembl:ENSDART00000140028
OMA:ILTHASW Uniprot:I7HJH4
Length = 858
Score = 237 (88.5 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 93/286 (32%), Positives = 133/286 (46%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G+N I +I+ F GLT L L L DN+L VP+ +F YL L EL + N ++ A
Sbjct: 105 GRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIPSYA 164
Query: 183 FNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 241
FN + L LDL L ISD AF GL L+ L L ++ + L LEELE
Sbjct: 165 FNRVPSLMRLDLGELRKLEYISDGAFEGLVNLKYLNLGMCNIRG-EMPNFTPLVGLEELE 223
Query: 242 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE 301
I +N F ++ G F+GLS LK+L I S + + + AF D +
Sbjct: 224 ISENLFPEIKPGSFRGLSSLKKLWIMN-SQIGLIERNAF-DDLASLVELNLAHNNLSSLP 281
Query: 302 EGALVGLPNLYHLNLKENAFTSFSESM-LA-WPELRTIDIAENPIECG-CNI-LWLR-EM 356
L L L+L N + +S+ LA W LR I N CG C+ +R
Sbjct: 282 HDLYTPLKYLVELHLHHNPWNCGCDSLWLARW--LREY-IPTNSTCCGRCHSPAHMRGRQ 338
Query: 357 LV---RRNTSAVFCNSPAPLKYKSLISLSAE---DLGCAGAGLTNI 396
LV R +T A+ C++P +++SAE +L C A ++ +
Sbjct: 339 LVELDRGDTGAMQCSAPFIADAPRDLNISAERVAELKCRTAAMSAV 384
Score = 205 (77.2 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 79/282 (28%), Positives = 114/282 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I + F L L +L L N +R + +F L L L + N T + GAF
Sbjct: 82 ENAIESVQVDSFRNLHHLEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVPSGAF 141
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + L L L + R L+ I L L+ L +
Sbjct: 142 EYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELRKLEYISDGAFEGLVNLKYLNL 201
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNL-TRVRKGAFADXXXXXXXXXXXXXXXXXIE 301
G E F L L+ LEI+ NL ++ G+F IE
Sbjct: 202 GMCNIRG-EMPNFTPLVGLEELEIS--ENLFPEIKPGSFRGLSSLKKLWIMNSQIGL-IE 257
Query: 302 EGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWL----REM 356
A L +L LNL N +S + L + + NP CGC+ LWL RE
Sbjct: 258 RNAFDDLASLVELNLAHNNLSSLPHDLYTPLKYLVELHLHHNPWNCGCDSLWLARWLREY 317
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISD 398
+ +T C+SPA ++ + L+ L D G I+D
Sbjct: 318 IPTNSTCCGRCHSPAHMRGRQLVELDRGDTGAMQCSAPFIAD 359
Score = 191 (72.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 62/211 (29%), Positives = 96/211 (45%)
Query: 47 IQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN--K 103
++ L L N I+ ++ A +L ++L ++P G FE KL EL L +N +
Sbjct: 99 LEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIE 158
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
P + S R+++ ++ I FEGL L+ L L +R P+F L
Sbjct: 159 SIPSYAFNRVPSLMRLDLGELRKLEYISDGAFEGLVNLKYLNLGMCNIRG-EMPNFTPLV 217
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L EL + N+F + G+F GL L L + + + I NAF L+ L L L N L
Sbjct: 218 GLEELEISENLFPEIKPGSFRGLSSLKKLWIMNSQIGLIERNAFDDLASLVELNLAHNNL 277
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
S+P + L L EL + N ++ GC
Sbjct: 278 SSLPHDLYTPLKYLVELHLHHNPWN---CGC 305
Score = 169 (64.5 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 47/132 (35%), Positives = 70/132 (53%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N + SV SF L L L++G N + GAF+GL L+ L+L LT
Sbjct: 76 RHLNLMENAIESVQVDSFRNLHHLEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTV 135
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
+ AF LS LR L L +N ++SIP+ +++ L L++G+ + G F+GL
Sbjct: 136 VPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELRKLEYISDGAFEGLVN 195
Query: 261 LKRLEITGASNL 272
LK L + G N+
Sbjct: 196 LKYLNL-GMCNI 206
Score = 158 (60.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 77/286 (26%), Positives = 114/286 (39%)
Query: 307 GLPNLY-HLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNI-LWLREMLVRRNTS 363
G+P+ HLNL ENA S +S L + + N I I + L NT
Sbjct: 70 GIPSTTRHLNLMENAIESVQVDSFRNLHHLEVLQLGRNAIR---QIEVGAFSGLTNLNTL 126
Query: 364 AVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNR-LQSIP 421
+F N + + LS +L + +I AF + L L L + R L+ I
Sbjct: 127 ELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELRKLEYIS 186
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL-TRVRKGAFADXXXX 480
L L+ L +G E F L L+ LEI+ NL ++ G+F
Sbjct: 187 DGAFEGLVNLKYLNLGMCNIRG-EMPNFTPLVGLEELEIS--ENLFPEIKPGSFRGLSSL 243
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
+IE +A L +L LNL N +S + L + + NP
Sbjct: 244 KKLWIMNSQIG-LIERNAFDDLASLVELNLAHNNLSSLPHDLYTPLKYLVELHLHHNPWN 302
Query: 540 CGCNILWL----REMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLG 581
CGC+ LWL RE + +T C+SPA ++ + L+ L D G
Sbjct: 303 CGCDSLWLARWLREYIPTNSTCCGRCHSPAHMRGRQLVELDRGDTG 348
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 60/252 (23%), Positives = 102/252 (40%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
L +V T L +P + TR L + +N ++ F+ L +L+ L++ G + +
Sbjct: 54 LSKVVCTRRGLTRVPPG-IPSTTR--HLNLMENAIESVQVDSFRNLHHLEVLQL-GRNAI 109
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAW 331
++ GAF+ + GA L L L L+ N S S +
Sbjct: 110 RQIEVGAFSGLTNLNTLELFDNRLTV-VPSGAFEYLSKLRELWLRNNPIESIPSYAFNRV 168
Query: 332 PELRTIDIAE-NPIECGCNILWLREMLVR-RNTSAVFCNSPAPL-KYKSLISLSAEDLGC 388
P L +D+ E +E + + E LV + + CN + + L+ L E+L
Sbjct: 169 PSLMRLDLGELRKLEYISDGAF--EGLVNLKYLNLGMCNIRGEMPNFTPLVGL--EELEI 224
Query: 389 AGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
+ I +FRGLS L+ L + ++++ I L L EL + N S L
Sbjct: 225 SENLFPEIKPGSFRGLSSLKKLWIMNSQIGLIERNAFDDLASLVELNLAHNNLSSLPHDL 284
Query: 449 FKGLSYLKRLEI 460
+ L YL L +
Sbjct: 285 YTPLKYLVELHL 296
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 239 (89.2 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 127/533 (23%), Positives = 214/533 (40%)
Query: 30 NLQEANLDVIPSHS---NPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPI 85
+L E + IP + ++ L L N+I ++ A L+ + L++ IP+
Sbjct: 1 DLSENTIQAIPRKAFRGATDLKNLQLDKNQIGCIEEGAFRALRGLEVLTLNNNNITTIPV 60
Query: 86 GGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F KL +L H+ H + C + Q + C G LR L
Sbjct: 61 SSFNHMPKLRTFRL-HSNH----LFCDCHLAWLSQWLRQRPTIGLFTQC-SGPAGLRGL- 113
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS--ALDLRGAGLTNIS 203
+ V F G E G TL+ G+ + S +D RG GLT I
Sbjct: 114 ----NVAEVQKSEFSCSGQ-GE--AGRTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIP 166
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
N ++ +R L L N ++SIP S +L +++ N S + F+GL L
Sbjct: 167 ANLPEAMTEIR-LEL--NGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNS 223
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
L + G + +T + +G F I A L NL L+L +N S
Sbjct: 224 LVLYG-NKITDLPQGVFGGLFTLQLLLLNANKINC-IRLDAFQDLQNLSLLSLYDNKIQS 281
Query: 324 FSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPLKYKSLI 379
++ + + ++T+ +A+NP C CN+ WL + L R N TS C SP L K +
Sbjct: 282 LAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFL-RSNPIETSGARCASPRRLANKRIG 340
Query: 380 SLSAEDLGCAGAGLTNISD-NAFRGLSGLRSLVLTDNRLQ---SIPTKQLSKLTRLEE-- 433
+ ++ C+ I ++ S S V+ ++ + S+ KLT++ E
Sbjct: 341 QIKSKKFRCSAKEQYFIPGAEDYQLNSECNSDVVCPHKCRCEASMVECSSLKLTKIPERV 400
Query: 434 ------LEIGQNGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 486
L + N S+LEA G FK L++LK++ ++ + ++ + GAF +
Sbjct: 401 PQATAELRLNNNEISILEATGMFKKLTHLKKINLSN-NKVSEIEDGAF-EGAASVSELHL 458
Query: 487 XXXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPI 538
I GL L L L+ N + ++S +R + + +N I
Sbjct: 459 TANQLESIRSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQI 511
Score = 229 (85.7 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 95/402 (23%), Positives = 166/402 (41%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFS 248
S ++ LT I + + + LR L +N + + T KLT L+++ + N S
Sbjct: 384 SMVECSSLKLTKIPERVPQATAELR---LNNNEISILEATGMFKKLTHLKKINLSNNKVS 440
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+E G F+G + + L +T A+ L +R G F I + GL
Sbjct: 441 EIEDGAFEGAASVSELHLT-ANQLESIRSGMFRGLEGLRTLMLRNNRISC-IHNDSFTGL 498
Query: 309 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAV 365
N+ L+L +N + S L T+++ NP C C + WL + L +R T
Sbjct: 499 RNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNP 558
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGA---GLTNISDNAFRGLSGLRSLVLTDNR-LQSIP 421
C +P L+ L +++ D C G + + L ++V N+ LQ++P
Sbjct: 559 RCQNPDFLRQIPLQDVASPDFRCEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLQTLP 618
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN--LTRVRKGAFADXXX 479
K + K + EL + N F+++ A LS K L++ SN ++ + +F +
Sbjct: 619 -KGIPK--NVTELYLDGNQFTLVPAQ----LSTFKYLQLVDLSNNKISSLSNSSFTNMSQ 671
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPI 538
I A GL +L L+L N ++ E + A L + I NP+
Sbjct: 672 LTTLILSYNSLQ-CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPL 730
Query: 539 ECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAE 578
C C++ WL + + C P ++ K L++ A+
Sbjct: 731 YCDCHLRWLSSWVKTGYKEPGIARCAGPLDMEGKLLLTTPAK 772
Score = 180 (68.4 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 86/349 (24%), Positives = 141/349 (40%)
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
++ +N + F+G + LK L++ + + + +GAF I
Sbjct: 1 DLSENTIQAIPRKAFRGATDLKNLQLD-KNQIGCIEEGAFR-ALRGLEVLTLNNNNITTI 58
Query: 301 EEGALVGLPNLYHLNLKENAFTSFSESMLAWPE--LR---TIDI---AENPIEC-GCNIL 351
+ +P L L N F + LAW LR TI + P G N+
Sbjct: 59 PVSSFNHMPKLRTFRLHSNHL--FCDCHLAWLSQWLRQRPTIGLFTQCSGPAGLRGLNVA 116
Query: 352 WLREMLVRRNTSAVFCNSPA-PLKYKSLISLSAEDLG---CAGAGLTNISDNAFRGLSGL 407
+++ + +P+ L S ++ A G C G GLT I N ++ +
Sbjct: 117 EVQKSEFSCSGQGEAGRTPSCTLSSGSCPAMCACSNGIVDCRGKGLTAIPANLPEAMTEI 176
Query: 408 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 467
R L L N ++SIP S +L +++ N S + F+GL L L + G + +T
Sbjct: 177 R-LEL--NGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYG-NKIT 232
Query: 468 RVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWP 526
+ +G F I DA L NL L+L +N S ++ + +
Sbjct: 233 DLPQGVFGGLFTLQLLLLNANKIN-CIRLDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLR 291
Query: 527 ELRTIDIAENPIECGCNILWLREMLVRRN---TSAVFCNSPAPLKYKSL 572
++T+ +A+NP C CN+ WL + L R N TS C SP L K +
Sbjct: 292 AIQTLHLAQNPFICDCNLKWLADFL-RSNPIETSGARCASPRRLANKRI 339
Score = 179 (68.1 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 56/217 (25%), Positives = 92/217 (42%)
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQL 425
CNS +K S + C+ LT I + + + LR L +N + + T
Sbjct: 369 CNSDVVCPHKCRCEASMVE--CSSLKLTKIPERVPQATAELR---LNNNEISILEATGMF 423
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
KLT L+++ + N S +E G F+G + + L +T A+ L +R G F
Sbjct: 424 KKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLT-ANQLESIRSGMFRGLEGLRTLML 482
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNI 544
I D+ GL N+ L+L +N + S L T+++ NP C C +
Sbjct: 483 RNNRIS-CIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQL 541
Query: 545 LWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAED 579
WL + L +R T C +P L+ L +++ D
Sbjct: 542 AWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVASPD 578
Score = 142 (55.0 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 144 LYLDDNQLRSVP-TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L++N++ + T F L L ++ + N + + DGAF G +S L L L +I
Sbjct: 407 LRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESI 466
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
FRGL GLR+L+L +NR+ I + L + L + N + + G F L L
Sbjct: 467 RSGMFRGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALS 526
Query: 263 RLEI 266
L +
Sbjct: 527 TLNL 530
Score = 128 (50.1 bits), Expect = 0.00028, P = 0.00028
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 125 NRISRIDQA-CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
N IS ++ F+ LT L+ + L +N++ + +F ++EL + N ++ G F
Sbjct: 412 NEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMF 471
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L LR ++ I +++F GL +R L L DN++ +I L L L +
Sbjct: 472 RGLEGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLL 531
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITG 268
N F+ + G KR +TG
Sbjct: 532 ANPFNCNCQLAWLGDWLRKRKIVTG 556
Score = 111 (44.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ EL + N FT L + L +DL ++++S+++F +S L +L+L+ N LQ
Sbjct: 625 VTELYLDGNQFT-LVPAQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQ 683
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
IP L L L + N S L+ G F ++ L L I GA+ L
Sbjct: 684 CIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAI-GANPL 730
Score = 106 (42.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 45/184 (24%), Positives = 79/184 (42%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ LQ++P K + K + EL + N F+++ A LS K L++ SN
Sbjct: 603 LDTVVRCSNKHLQTLP-KGIPK--NVTELYLDGNQFTLVPAQ----LSTFKYLQLVDLSN 655
Query: 272 --LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML 329
++ + +F + I A GL +L L+L N ++ E +
Sbjct: 656 NKISSLSNSSFTNMSQLTTLILSYNSLQC-IPPLAFQGLRSLRLLSLHGNDISTLQEGIF 714
Query: 330 A-WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAEDL 386
A L + I NP+ C C++ WL + + C P ++ K L++ A+
Sbjct: 715 ADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPLDMEGKLLLTTPAKKF 774
Query: 387 GCAG 390
C G
Sbjct: 775 ECQG 778
Score = 103 (41.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 45/173 (26%), Positives = 72/173 (41%)
Query: 8 ELRSKCMNPYE-PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI 66
+L S+C + P + L IP + L L+ N I ++ A +
Sbjct: 364 QLNSECNSDVVCPHKCRCEASMVECSSLKLTKIPERVPQATAELRLNNNEISILE-ATGM 422
Query: 67 YLSLQH---VDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIF 122
+ L H ++LS+ I G FE + EL L N+ + + + R +
Sbjct: 423 FKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLEGLRTLML 482
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
NRIS I F GL +R+L L DNQ+ ++ +F L L+ L + N F
Sbjct: 483 RNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPF 535
>FB|FBgn0034476 [details] [associations]
symbol:Toll-7 "Toll-7" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISS;NAS]
[GO:0006952 "defense response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] [GO:0002752 "cell surface pattern recognition
receptor signaling pathway" evidence=IC] [GO:0008329 "pattern
recognition receptor activity" evidence=IC] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0046790 "virion binding"
evidence=IDA] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0010508 "positive regulation of autophagy"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 EMBL:AE013599
GO:GO:0016021 GO:GO:0009897 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0010508 GO:GO:0051607
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0008329
GO:GO:0046790 GO:GO:0002752 GeneTree:ENSGT00700000104442
SUPFAM:SSF52200 FlyBase:FBgn0034476 EMBL:AF247765
RefSeq:NP_523797.1 UniGene:Dm.2660 SMR:Q7KIN0
EnsemblMetazoa:FBtr0086336 GeneID:37272 KEGG:dme:Dmel_CG8595
UCSC:CG8595-RA CTD:37272 InParanoid:Q7KIN0 OMA:NHAFIGR
GenomeRNAi:37272 NextBio:802851 Uniprot:Q7KIN0
Length = 1446
Score = 203 (76.5 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 79/307 (25%), Positives = 134/307 (43%)
Query: 47 IQRLVLSTNRIKTVDSA--IPIYLSLQHVDLSHTTWLIIP---IGGFEPQEKLVELQLNH 101
+Q L S N ++++ + I LQH++L++ + + G ++V L NH
Sbjct: 249 LQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASL-RIVNLSNNH 307
Query: 102 NKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRS--VPTPSF 159
+ P+ + R + + QN + + + F L L ++ L NQL S V +F
Sbjct: 308 LETLPEGLFAGSKELREIHL-QQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTF 366
Query: 160 IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
L L L + N T + F L L L+LR + +I DNAF L L +L L
Sbjct: 367 AGLIRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLA 426
Query: 220 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 279
+NRL ++ K + L L +L + N S++E FK S LK L+++ ++ L V + A
Sbjct: 427 ENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLS-SNQLNEVPR-A 484
Query: 280 FADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTID 338
D + + L L L L +N + + M P L ++
Sbjct: 485 LQDLAMLRTLDLGENQIRT-FDNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLN 543
Query: 339 IAENPIE 345
+A+N I+
Sbjct: 544 LAKNRIQ 550
Score = 174 (66.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 83/341 (24%), Positives = 137/341 (40%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I I+ F L L L L +N+L ++ F L +L++L + N+ + + F
Sbjct: 404 NSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPAVFK 463
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L LDL L + A + L+ LR+L L +N++++ + L +L L +
Sbjct: 464 NCSDLKELDLSSNQLNEVP-RALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLID 522
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + G F+ L L L + + + + +G+F D I G
Sbjct: 523 NQIGNITVGMFQDLPRLSVLNLA-KNRIQSIERGSF-DKNFELEAIRLDRNFLADIN-GV 579
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA 364
L +L LNL EN F + + L+ +DI N IE N L+E + + A
Sbjct: 580 FATLVSLLWLNLSENHLVWFDYAFIP-SNLKWLDIHGNYIEALGNYYKLQEEIRVKTLDA 638
Query: 365 VF--CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
P+ + I L + G N+ NAF + L + L N+L +
Sbjct: 639 SHNRITEIGPMSIPNTIELLFINNNLIG----NVQPNAFVDKANLARVDLYANQLSKLQL 694
Query: 423 KQLSKLT-----RLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
+QL L E +G N F E C + +L+R+
Sbjct: 695 QQLRVAPVVAPKPLPEFYLGGNPF---ECDCT--MDWLQRI 730
Score = 156 (60.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 97/396 (24%), Positives = 150/396 (37%)
Query: 97 LQLNHNKHFPQQIVCSI-ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 155
LQL +N + S+ +S E +G R + GL L L L DN LR +P
Sbjct: 147 LQLPNNAFEGLATLKSLRLSTHNSE-WGPTRTLELFPDSLGGLKQLTDLDLGDNNLRQLP 205
Query: 156 TPSFIYLGMLAELRVGLNVFTT-----LAD---GAFNGLG--RLSALDLRGAGLTNISDN 205
+ +G L L + N T AD GA +G L LD L +IS++
Sbjct: 206 SGFLCPVGNLQVLNLTRNRIRTAEQMGFADMNCGAGSGSAGSELQVLDASHNELRSISES 265
Query: 206 -AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
L L+ L L N L + + L+ L L + + N L G F G L+ +
Sbjct: 266 WGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETLPEGLFAGSKELREI 325
Query: 265 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXX-IEEGALVGLPNLYHLNLKENAFTS 323
+ + L + KG F ++ GL L LNL NA T
Sbjct: 326 HLQ-QNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTR 384
Query: 324 FS-ESMLAWPELRTIDIAENPI-ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISL 381
+ L+ +++ N I N L N + ++ + L L
Sbjct: 385 IDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDKLFNGLYVL 444
Query: 382 SAEDLGCAGAGLTNISDNA-FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
S L L ++ + A F+ S L+ L L+ N+L +P + L L L L++G+N
Sbjct: 445 SKLTLN---NNLISVVEPAVFKNCSDLKELDLSSNQLNEVP-RALQDLAMLRTLDLGENQ 500
Query: 441 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 476
+ FK L L L + + + + G F D
Sbjct: 501 IRTFDNQSFKNLHQLTGLRLID-NQIGNITVGMFQD 535
Score = 156 (60.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 88/417 (21%), Positives = 161/417 (38%)
Query: 138 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 197
L + ++L L +N + T + L G L + GL +L+ LDL
Sbjct: 141 LDSCKLLQLPNNAFEGLATLKSLRLST-HNSEWGPTRTLELFPDSLGGLKQLTDLDLGDN 199
Query: 198 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL----------TRLEELEIGQNGF 247
L + + L+ L LT NR+++ + + + L+ L+ N
Sbjct: 200 NLRQLPSGFLCPVGNLQVLNLTRNRIRTAEQMGFADMNCGAGSGSAGSELQVLDASHNEL 259
Query: 248 SMLEAGCFKGLSYLKRLEITGAS--NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGAL 305
+ G+S L+RL+ + NL+ + A A + EG
Sbjct: 260 RSISESW--GISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLET-LPEGLF 316
Query: 306 VGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSA 364
G L ++L++N + + +L +D++ N + L+R
Sbjct: 317 AGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLN 376
Query: 365 VFCNSPAPLKYKSLISLS-AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
+ N+ + Y++ L + L + +I DNAF L L +L L +NRL ++ K
Sbjct: 377 LAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDK 436
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
+ L L +L + N S++E FK S LK L+++ ++ L V + A D
Sbjct: 437 LFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLS-SNQLNEVPR-ALQDLAMLRTL 494
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
+ + L L L L +N + + M P L +++A+N I+
Sbjct: 495 DLGENQIRTF-DNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQ 550
Score = 148 (57.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 101/410 (24%), Positives = 152/410 (37%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR------GA 197
LYL ++ L P F L L LR+ L + AF GL L +L L G
Sbjct: 118 LYLFESTL---PVAVFARLQTLEALRLDSCKLLQLPNNAFEGLATLKSLRLSTHNSEWGP 174
Query: 198 GLT-NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 256
T + ++ GL L L L DN L+ +P+ L + L+ L + +N E F
Sbjct: 175 TRTLELFPDSLGGLKQLTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNRIRTAEQMGFA 234
Query: 257 GLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNL 316
++ GA G+ + E + L L HLNL
Sbjct: 235 DMN-------CGA--------GSGSAGSELQVLDASHNELRSISESWGISRLRRLQHLNL 279
Query: 317 KENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILW-----LREMLVRRNTSAVFCNSP 370
N + S E++ LR ++++ N +E L+ LRE+ +++N P
Sbjct: 280 AYNNLSELSGEALAGLASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQNE---LYELP 336
Query: 371 APLKYKSLISLSAEDLGCAGAGLT-NISDNA-FRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
L ++ L L DL +G LT N DN F GL L L L N L I + +L
Sbjct: 337 KGLFHR-LEQLLVVDL--SGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTFKEL 393
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 488
L+ L + N +E F L L L + A N +
Sbjct: 394 YFLQILNLRNNSIGHIEDNAFLPLYNLHTLNL--AENRLHTLDDKLFNGLYVLSKLTLNN 451
Query: 489 XXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 538
++E +L L+L N ++ LRT+D+ EN I
Sbjct: 452 NLISVVEPAVFKNCSDLKELDLSSNQLNEVPRALQDLAMLRTLDLGENQI 501
Score = 139 (54.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 62/222 (27%), Positives = 99/222 (44%)
Query: 50 LVLSTNRIKTVDSAI--PIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-H-F 105
L L+ N + +D +Y LQ ++L + + I F P L L L N+ H
Sbjct: 375 LNLAHNALTRIDYRTFKELYF-LQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTL 433
Query: 106 PQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 165
++ + ++ + N IS ++ A F+ + L+ L L NQL VP + L ML
Sbjct: 434 DDKLFNGLYVLSKLTL-NNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPR-ALQDLAML 491
Query: 166 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 225
L +G N T + +F L +L+ L L + NI+ F+ L L L L NR+QS
Sbjct: 492 RTLDLGENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQS 551
Query: 226 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 267
I K LE + + +N + + G F L L L ++
Sbjct: 552 IERGSFDKNFELEAIRLDRNFLADIN-GVFATLVSLLWLNLS 592
Score = 136 (52.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 74/321 (23%), Positives = 135/321 (42%)
Query: 46 SIQRLVLSTNRIKTVDSAI--PIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
++ L L+ NR+ T+D + +Y+ L + L++ ++ F+ L EL L+ N+
Sbjct: 419 NLHTLNLAENRLHTLDDKLFNGLYV-LSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQ 477
Query: 104 --HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
P+ + + R +++ G+N+I D F+ L L L L DNQ+ ++ F
Sbjct: 478 LNEVPRALQ-DLAMLRTLDL-GENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGMFQD 535
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L+ L + N ++ G+F+ L A+ L L +I+ F L L L L++N
Sbjct: 536 LPRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADIN-GVFATLVSLLWLNLSEN 594
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L + + L+ L+I N L G + L R++ AS+ R+ +
Sbjct: 595 HLVWFDYAFIP--SNLKWLDIHGNYIEAL--GNYYKLQEEIRVKTLDASH-NRITEIGPM 649
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIA 340
++ A V NL ++L N + + + P + +
Sbjct: 650 SIPNTIELLFINNNLIGNVQPNAFVDKANLARVDLYANQLSKLQLQQLRVAPVVAPKPLP 709
Query: 341 E-----NPIECGCNILWLREM 356
E NP EC C + WL+ +
Sbjct: 710 EFYLGGNPFECDCTMDWLQRI 730
Score = 135 (52.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 76/331 (22%), Positives = 129/331 (38%)
Query: 138 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 197
L L+ L L N L + + L L + + N TL +G F G L + L+
Sbjct: 271 LRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETLPEGLFAGSKELREIHLQQN 330
Query: 198 GLTNISDNAFRGLSGLRSLVLTDNRLQS--IPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
L + F L L + L+ N+L S + + L RL L + N + ++ F
Sbjct: 331 ELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLNLAHNALTRIDYRTF 390
Query: 256 KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLN 315
K L +L+ L + S + + AF +++ GL L L
Sbjct: 391 KELYFLQILNLRNNS-IGHIEDNAFLPLYNLHTLNLAENRLHT-LDDKLFNGLYVLSKLT 448
Query: 316 LKENAFTSFSESMLA-WPELRTIDIAENPIE----CGCNILWLREMLVRRNTSAVFCNSP 370
L N + ++ +L+ +D++ N + ++ LR + + N F N
Sbjct: 449 LNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPRALQDLAMLRTLDLGENQIRTFDNQ- 507
Query: 371 APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 430
+K+L L+ L + NI+ F+ L L L L NR+QSI K
Sbjct: 508 ---SFKNLHQLTG--LRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNFE 562
Query: 431 LEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
LE + + +N + + G F L L L ++
Sbjct: 563 LEAIRLDRNFLADIN-GVFATLVSLLWLNLS 592
Score = 87 (35.7 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 31/124 (25%), Positives = 57/124 (45%)
Query: 342 NPIECGCNILWLREMLVRRNTSAVFC--NSPAPLKYKSLISL-SAEDLGCAGAGLTNISD 398
N ++CG V ++S V+ N+ LK + I + L G+ + I +
Sbjct: 811 NVVDCGGQQTTELPRRVPMDSSVVYLDGNNFPVLKNHAFIGRKNLRALYVNGSQVAAIQN 870
Query: 399 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
F L+ L+ L L DN+L+++ + +L+ L EL + N + +E L+ L+ +
Sbjct: 871 RTFASLASLQLLHLADNKLRTLHGYEFEQLSALRELYLQNNQLTTIENATLAPLAALELI 930
Query: 459 EITG 462
I G
Sbjct: 931 RIDG 934
Score = 80 (33.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 359 RRNTSAVFCNSP--APLKYKSLISL-SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
R+N A++ N A ++ ++ SL S + L A L + F LS LR L L +N
Sbjct: 852 RKNLRALYVNGSQVAAIQNRTFASLASLQLLHLADNKLRTLHGYEFEQLSALRELYLQNN 911
Query: 416 RLQSIPTKQLSKLTRLEELEIGQN 439
+L +I L+ L LE + I N
Sbjct: 912 QLTTIENATLAPLAALELIRIDGN 935
Score = 80 (33.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 24/115 (20%), Positives = 49/115 (42%)
Query: 361 NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
+T+ V C + + + + + G + ++AF G LR+L + +++ +I
Sbjct: 809 STNVVDCGGQQTTELPRRVPMDSSVVYLDGNNFPVLKNHAFIGRKNLRALYVNGSQVAAI 868
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
+ + L L+ L + N L F+ LS L+ L + + LT + A
Sbjct: 869 QNRTFASLASLQLLHLADNKLRTLHGYEFEQLSALRELYLQN-NQLTTIENATLA 922
Score = 60 (26.2 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL---TRLEELEIGQNGFS 442
LT I + L+ L + + NRL ++P Q+ TRL+ + +G+N +S
Sbjct: 913 LTTIENATLAPLAALELIRIDGNRLVTLPIWQMHATHFGTRLKSISLGRNQWS 965
Score = 54 (24.1 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 494 IEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAE-----NPIECGCNILWL 547
++ +A V NL ++L N + + + P + + E NP EC C + WL
Sbjct: 668 VQPNAFVDKANLARVDLYANQLSKLQLQQLRVAPVVAPKPLPEFYLGGNPFECDCTMDWL 727
Query: 548 REM 550
+ +
Sbjct: 728 QRI 730
>ZFIN|ZDB-GENE-031113-8 [details] [associations]
symbol:lrrc15 "leucine rich repeat containing 15"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-031113-8
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00700000104286
OMA:NHLEYIP EMBL:BX950188 EMBL:BX957243 IPI:IPI00628487
UniGene:Dr.18765 Ensembl:ENSDART00000104248 HOVERGEN:HBG095770
Uniprot:B0S8K3
Length = 564
Score = 232 (86.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 74/322 (22%), Positives = 147/322 (45%)
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV-FTTLADGAFNGLGRLSALDLRGAGL 199
+ L + + ++S+ F L V N T + F+ L+ L G L
Sbjct: 50 INALVISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTML 109
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
T++ DN F+ L+ L +L L+ N+L+ +P+ L+ L + +L++ +N S L F+GL
Sbjct: 110 TSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSEDAFRGLD 169
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L+ L + +++ ++ F I G L NL L+L++N
Sbjct: 170 QLEMLMLQ-RNSIKQLHSSTF-QGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLHLQDN 227
Query: 320 AFTSFSESMLAWPE-LRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSL 378
++ A + L+ + ++ N + + ++L L +++ N + L ++
Sbjct: 228 KIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLN--LPNLTHFSLYDNRLSRLMPETF 285
Query: 379 ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
++ ++L LT++ +N F L+ +R LV++ NR+Q I + L L+E+ +
Sbjct: 286 GPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELKEVSLHT 345
Query: 439 NGFSMLEAGCFKGLSYLKRLEI 460
N + +E G F+GL L + I
Sbjct: 346 NRLTNIEPGIFRGLPNLANISI 367
Score = 228 (85.3 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 84/339 (24%), Positives = 146/339 (43%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
+ I+ ++ F+ L +L L S+P F L L L + N L
Sbjct: 83 SNITEVEPHTFDQAFNLNVLGFSGTMLTSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLT 142
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L ++ LDL L+++S++AFRGL L L+L N ++ + + L+ L L + Q
Sbjct: 143 PLVNVNKLDLSKNLLSSLSEDAFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQ 202
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + + AG F L L+ L + + + ++ FA + G
Sbjct: 203 NELTDIPAGLFDDLVNLEVLHLQD-NKIEQLPANLFAKVQKLKKLYLSSNRLSL-LPSGI 260
Query: 305 LVGLPNLYHLNLKENAFTSFS-ESM--LAWPELRTIDIAENPIECGC--NILWLREMLVR 359
+ LPNL H +L +N + E+ +A EL D +E N+ +R +++
Sbjct: 261 FLNLPNLTHFSLYDNRLSRLMPETFGPMALQELWLYDNLLTHLEENVFSNLTNIRLLVIS 320
Query: 360 RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
RN +P + LI L +++ LTNI FRGL L ++ + +N+++
Sbjct: 321 RNRIQYI----SPGAFNGLIEL--KEVSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQ 374
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
IP + L ++RL LE+ N L LS ++ +
Sbjct: 375 IPIQLLDGVSRLSLLEMQNNSLQNLPKDFLNTLSIVENV 413
Score = 219 (82.2 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 81/324 (25%), Positives = 145/324 (44%)
Query: 122 FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 181
F ++ + F+ LTAL L L N+L +P+ L + +L + N+ ++L++
Sbjct: 104 FSGTMLTSLPDNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSED 163
Query: 182 AFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 241
AF GL +L L L+ + + + F+GLS LRSL L N L IP L LE L
Sbjct: 164 AFRGLDQLEMLMLQRNSIKQLHSSTFQGLSHLRSLFLQQNELTDIPAGLFDDLVNLEVLH 223
Query: 242 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE 301
+ N L A F + LK+L ++ ++ L+ + G F + +
Sbjct: 224 LQDNKIEQLPANLFAKVQKLKKLYLS-SNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMP 282
Query: 302 EGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIEC---GC--NILWLRE 355
E G L L L +N T E++ + +R + I+ N I+ G ++ L+E
Sbjct: 283 E--TFGPMALQELWLYDNLLTHLEENVFSNLTNIRLLVISRNRIQYISPGAFNGLIELKE 340
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
+ + N + P ++ L +L+ ++ + I G+S L L + +N
Sbjct: 341 VSLHTNR----LTNIEPGIFRGLPNLA--NISIENNQIKQIPIQLLDGVSRLSLLEMQNN 394
Query: 416 RLQSIPTKQLSKLTRLEELEIGQN 439
LQ++P L+ L+ +E + + +N
Sbjct: 395 SLQNLPKDFLNTLSIVENVILHEN 418
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 86/398 (21%), Positives = 152/398 (38%)
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
+ + +T + + F L L + L S+P LT L L + N +L +
Sbjct: 81 KNSNITEVEPHTFDQAFNLNVLGFSGTMLTSLPDNLFQNLTALTTLTLSGNKLEVLPSSL 140
Query: 255 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHL 314
L + +L+++ + L+ + + AF + GL +L L
Sbjct: 141 LTPLVNVNKLDLS-KNLLSSLSEDAFRGLDQLEMLMLQRNSIKQ-LHSSTFQGLSHLRSL 198
Query: 315 NLKENAFTSFSESMLA-WPELRTIDIAENPIE-CGCNILW----LREMLVRRNTSAVFCN 368
L++N T + L + + +N IE N+ L+++ + N ++
Sbjct: 199 FLQQNELTDIPAGLFDDLVNLEVLHLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLL-P 257
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
S L +L S D L+ + F G L+ L L DN L + S L
Sbjct: 258 SGIFLNLPNLTHFSLYD-----NRLSRLMPETF-GPMALQELWLYDNLLTHLEENVFSNL 311
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 488
T + L I +N + G F GL LK + + + LT + G F
Sbjct: 312 TNIRLLVISRNRIQYISPGAFNGLIELKEVSLH-TNRLTNIEPGIFRGLPNLANISIENN 370
Query: 489 XXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPEL-RTIDIAENPIECGCNIL-- 545
I + L G+ L L ++ N+ + + L + + + ENP C +I+
Sbjct: 371 QIKQIPIQ-LLDGVSRLSLLEMQNNSLQNLPKDFLNTLSIVENVILHENPWRCDQDIIPF 429
Query: 546 --WLREMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDL 580
WL + + +N S V C+SP PL + + L +D+
Sbjct: 430 WDWLSQHSEKVKNLSLVMCSSPPPLNGRIVRELIEDDI 467
Score = 147 (56.8 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 51/198 (25%), Positives = 94/198 (47%)
Query: 30 NLQEANLDVIPSHSNPSIQRL---VLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPI 85
+LQ+ ++ +P++ +Q+L LS+NR+ + S I + L +L H L +
Sbjct: 223 HLQDNKIEQLPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMP 282
Query: 86 GGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
F P L EL L N H + + ++ + R + + +NRI I F GL L+
Sbjct: 283 ETFGPMA-LQELWLYDNLLTHLEENVFSNLTNIRLL-VISRNRIQYISPGAFNGLIELKE 340
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+ L N+L ++ F L LA + + N + +G+ RLS L+++ L N+
Sbjct: 341 VSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNSLQNLP 400
Query: 204 DNAFRGLSGLRSLVLTDN 221
+ LS + +++L +N
Sbjct: 401 KDFLNTLSIVENVILHEN 418
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 83/355 (23%), Positives = 127/355 (35%)
Query: 121 IFGQNRISRIDQACFEGLTALRILYLDDNQ-LRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
+ I + + F+ L++ N + V +F L L + T+L
Sbjct: 54 VISNTSIQSLKPSDFQTFAETLTLFVAKNSNITEVEPHTFDQAFNLNVLGFSGTMLTSLP 113
Query: 180 DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 239
D F L L+ L L G L + + L + L L+ N L S+ L +LE
Sbjct: 114 DNLFQNLTALTTLTLSGNKLEVLPSSLLTPLVNVNKLDLSKNLLSSLSEDAFRGLDQLEM 173
Query: 240 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXX 299
L + +N L + F+GLS+L+ L + + LT + G F D
Sbjct: 174 LMLQRNSIKQLHSSTFQGLSHLRSLFLQ-QNELTDIPAGLF-DDLVNLEVLHLQDNKIEQ 231
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESM-LAWPELRTIDIAEN------PIECG---CN 349
+ + L L L N + + L P L + +N P G
Sbjct: 232 LPANLFAKVQKLKKLYLSSNRLSLLPSGIFLNLPNLTHFSLYDNRLSRLMPETFGPMALQ 291
Query: 350 ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRS 409
LWL + L+ VF N L L+ +S + IS AF GL L+
Sbjct: 292 ELWLYDNLLTHLEENVFSN----LTNIRLLVISRNRI-------QYISPGAFNGLIELKE 340
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 464
+ L NRL +I L L + I N + G+S L LE+ S
Sbjct: 341 VSLHTNRLTNIEPGIFRGLPNLANISIENNQIKQIPIQLLDGVSRLSLLEMQNNS 395
>UNIPROTKB|E1C2F8 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:FNPHFKE EMBL:AADN02009847 IPI:IPI00595522
Ensembl:ENSGALT00000016526 Uniprot:E1C2F8
Length = 834
Score = 243 (90.6 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 99/369 (26%), Positives = 151/369 (40%)
Query: 70 LQHVDLSHTTWLIIPIGGFEP--QEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRI 127
L+ + L+ IP G F K++ LQ N + P + + ++ S + + + N I
Sbjct: 18 LEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQNLRSLQSLRL-DANHI 76
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
+ + CF GL +LR L+LDDN L +P +F L L + + LN + D AF L
Sbjct: 77 NYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLS 136
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L L L + ++ F GL L +L L N L PT + LT L+EL N
Sbjct: 137 SLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFPTA-IRTLTNLKELGFHSNNI 195
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
+ F G L + + + V K AF + + L G
Sbjct: 196 KSIPERAFVGNPSLITIHFYD-NPIQLVGKSAFQNLPELRTLTLNGASQITEFPD--LTG 252
Query: 308 LPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIE---CGCNILWLREMLVRRNTS 363
+L L L TS S P L+ +D++ N +E C L+++ + N
Sbjct: 253 TTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDLPCFTACKKLQKIDLHHNE- 311
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
+ ++ L SL + DL A + I NAF L L L ++ N L S P
Sbjct: 312 ---IDEIKADTFRQLASLRSLDL--AWNKIKIIHPNAFSSLPSLIKLDVSSNLLSSFPVT 366
Query: 424 QLSKLTRLE 432
L LT L+
Sbjct: 367 GLHGLTHLK 375
Score = 230 (86.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 99/377 (26%), Positives = 149/377 (39%)
Query: 99 LNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 158
+N+ P V ++ + + G N ++ I + F GL +L++L L +NQLR VPT +
Sbjct: 1 MNNITKLPSNPVHNLRFLEELRLAG-NGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEA 59
Query: 159 FIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVL 218
L L LR+ N + FNGL L L L LT I AFR L L+++ L
Sbjct: 60 LQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTL 119
Query: 219 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
N++ IP L+ L L + N L CF GL L+ L++ ++L
Sbjct: 120 ALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLN-YNSLDEFPTA 178
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTI 337
I E A VG P+L ++ +N +S PELRT+
Sbjct: 179 I--RTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTL 236
Query: 338 ------DIAENPIECGCNILWLREMLVRRNTSAV--FCNSPAPLKYKSLISLSAEDLGCA 389
I E P G L + + TS C+ L+ L EDL C
Sbjct: 237 TLNGASQITEFPDLTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDLPC- 295
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
F L+ + L N + I +L L L++ N ++ F
Sbjct: 296 -----------FTACKKLQKIDLHHNEIDEIKADTFRQLASLRSLDLAWNKIKIIHPNAF 344
Query: 450 KGLSYLKRLEITGASNL 466
L L +L+++ SNL
Sbjct: 345 SSLPSLIKLDVS--SNL 359
Score = 196 (74.1 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 88/377 (23%), Positives = 148/377 (39%)
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
N + +P+ L L ELR+ N T + GAF GL L L L+ L + A +
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQ 61
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
L L+SL L N + +P + L L L + N + + F+ L L+ + +
Sbjct: 62 NLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTLA- 120
Query: 269 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM 328
+ + + AF + + + GL +L L+L N+ F ++
Sbjct: 121 LNKIHYIPDYAFGNLSSLVVLHLHNNRIYS-LGKKCFDGLHSLETLDLNYNSLDEFPTAI 179
Query: 329 LAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV---FCNSPAPLKYKSLISLSAE- 384
L+ + N NI + E N S + F ++P L KS E
Sbjct: 180 RTLTNLKELGFHSN------NIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPEL 233
Query: 385 -DLGCAGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
L GA +T D G + L SL LT ++ S+P +L L+ L++ N
Sbjct: 234 RTLTLNGASQITEFPD--LTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYN--- 288
Query: 443 MLE-AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVG 501
+LE CF L+++++ + + ++ F II +A
Sbjct: 289 LLEDLPCFTACKKLQKIDLHH-NEIDEIKADTFRQLASLRSLDLAWNKIK-IIHPNAFSS 346
Query: 502 LPNLYHLNLKENAFTSF 518
LP+L L++ N +SF
Sbjct: 347 LPSLIKLDVSSNLLSSF 363
Score = 187 (70.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 92/389 (23%), Positives = 149/389 (38%)
Query: 40 PSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQ 98
P H+ ++ L L+ N + + A SL+ + L + +P + L L+
Sbjct: 11 PVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQNNQLRQVPTEALQNLRSLQSLR 70
Query: 99 L--NHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 156
L NH + P ++S R + + N ++ I F L AL+ + L N++ +P
Sbjct: 71 LDANHINYVPPNCFNGLVSLRHLWL-DDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPD 129
Query: 157 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSL 216
+F L L L + N +L F+GL L LDL L A R L+ L+ L
Sbjct: 130 YAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLDLNYNSLDEFP-TAIRTLTNLKEL 188
Query: 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 276
N ++SIP + L + N ++ F+ L L+ L + GAS +T
Sbjct: 189 GFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELRTLTLNGASQITE-- 246
Query: 277 KGAFADXXXXXXXXXXXXXXX--XXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPEL 334
F D + A LPNL L+L N A +L
Sbjct: 247 ---FPDLTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNLLEDLP-CFTACKKL 302
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPA--PLKYKSLISLSAEDLGC---- 388
+ ID+ N I+ R++ R+ + P + SL SL D+
Sbjct: 303 QKIDLHHNEID-EIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLS 361
Query: 389 --AGAGLTNISDNAFRGLSGLRSLVLTDN 415
GL ++ G L+SL+ +DN
Sbjct: 362 SFPVTGLHGLTHLKLTGNHALQSLISSDN 390
Score = 163 (62.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 79/317 (24%), Positives = 139/317 (43%)
Query: 31 LQEANLDVIPSH---SNPSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIG 86
L + +L IP S P++Q + L+ N+I + D A SL + L + +
Sbjct: 95 LDDNSLTEIPIQAFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKK 154
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F+ L L LN+N FP I ++ + + + F N I I + F G +L +
Sbjct: 155 CFDGLHSLETLDLNYNSLDEFPTAIR-TLTNLKELG-FHSNNIKSIPERAFVGNPSLITI 212
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+ DN ++ V +F L L L + G + T D G L +L L GA +T++
Sbjct: 213 HFYDNPIQLVGKSAFQNLPELRTLTLNGASQITEFPD--LTGTTSLESLTLTGAQITSLP 270
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+A L L+ L L+ N L+ +P K +L+++++ N ++A F+ L+ L+
Sbjct: 271 RSACDQLPNLQVLDLSYNLLEDLPCFTACK--KLQKIDLHHNEIDEIKADTFRQLASLRS 328
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN-AFT 322
L++ + + + AF+ + + GL L HL L N A
Sbjct: 329 LDLAW-NKIKIIHPNAFSSLPSLIKLDVSSNL----LSSFPVTGLHGLTHLKLTGNHALQ 383
Query: 323 SFSESMLAWPELRTIDI 339
S S +PEL+ +++
Sbjct: 384 SLISSD-NFPELKVMEM 399
Score = 157 (60.3 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 77/325 (23%), Positives = 125/325 (38%)
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N + +P+ + L LEEL + NG + + G F GL LK L + + L +V A
Sbjct: 2 NNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLMLQN-NQLRQVPTEAL 60
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDI 339
+ + GL +L HL L +N+ T ++ + P L+ + +
Sbjct: 61 QNLRSLQSLRLDANHINY-VPPNCFNGLVSLRHLWLDDNSLTEIPIQAFRSLPALQAMTL 119
Query: 340 AENPIECGCNILW--LREMLVRR-NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
A N I + + L ++V + + ++ S + L SL DL L
Sbjct: 120 ALNKIHYIPDYAFGNLSSLVVLHLHNNRIY--SLGKKCFDGLHSLETLDLNYNS--LDEF 175
Query: 397 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
A R L+ L+ L N ++SIP + L + N ++ F+ L L+
Sbjct: 176 P-TAIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSAFQNLPELR 234
Query: 457 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXI--IEEDALVGLPNLYHLNLKENA 514
L + GAS +T F D I + A LPNL L+L N
Sbjct: 235 TLTLNGASQITE-----FPDLTGTTSLESLTLTGAQITSLPRSACDQLPNLQVLDLSYNL 289
Query: 515 FTSFSESMLAWPELRTIDIAENPIE 539
A +L+ ID+ N I+
Sbjct: 290 LEDLP-CFTACKKLQKIDLHHNEID 313
Score = 148 (57.2 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 69/244 (28%), Positives = 108/244 (44%)
Query: 31 LQEANLDVIPSHS--N-PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIG 86
LQ L +P+ + N S+Q L L N I V + +SL+H+ L + IPI
Sbjct: 47 LQNNQLRQVPTEALQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPIQ 106
Query: 87 GFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F L + L NK H+ +S V NRI + + CF+GL +L L
Sbjct: 107 AFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLD 166
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L+ N L PT + L L EL N ++ + AF G L + + + +
Sbjct: 167 LNYNSLDEFPT-AIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKS 225
Query: 206 AFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI-GQNGFSMLEAGCFKGLSYLKR 263
AF+ L LR+L L +++ P L+ T LE L + G S+ + C + L L+
Sbjct: 226 AFQNLPELRTLTLNGASQITEFP--DLTGTTSLESLTLTGAQITSLPRSACDQ-LPNLQV 282
Query: 264 LEIT 267
L+++
Sbjct: 283 LDLS 286
Score = 78 (32.5 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
+ I + FR L+ LRSL L N+++ I S L L +L++ N S GL
Sbjct: 312 IDEIKADTFRQLASLRSLDLAWNKIKIIHPNAFSSLPSLIKLDVSSNLLSSFPVTGLHGL 371
Query: 453 SYLK 456
++LK
Sbjct: 372 THLK 375
Score = 38 (18.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 568 KYKSLISLSAEDL 580
K+ SLIS+++ED+
Sbjct: 771 KHASLISVNSEDI 783
Score = 38 (18.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 374 KYKSLISLSAEDL 386
K+ SLIS+++ED+
Sbjct: 771 KHASLISVNSEDI 783
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 237 (88.5 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 88/332 (26%), Positives = 150/332 (45%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F GL+ L+ L L +N + S+ + S L +L L + N T+ +F L L L
Sbjct: 333 FIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLIL 392
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
+TN+++++F L+ L L L++NRL ++P + L +L++L + N +
Sbjct: 393 SFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLE-INWST 451
Query: 255 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHL 314
F+GL +K L++ ++ + ++ G F +G L L L HL
Sbjct: 452 FRGLESMKNLQLK-SNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQG-LFNLTKLRHL 509
Query: 315 NLKENAFTSFSESMLAWPE-LRTIDIAENPI-ECGCNILWLREMLVRRNTSAVFCNSPAP 372
NL NA + + + L +D++ N I E L + L R T + N
Sbjct: 510 NLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHL---DCLHRLKTLNLAHNRLQY 566
Query: 373 LKYKSLISL-SAEDLGCAGAGLT-NISDNA----FRGLSGLRSLVLTDNRLQSIPTKQLS 426
L+ + + + E+L L+ I D + F+GL LR L L N L+ I TK +S
Sbjct: 567 LQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAMS 626
Query: 427 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
L LE L +G N + ++ F+ + L +L
Sbjct: 627 GLNNLEILNLGSNALASIQVNAFEHMLRLNKL 658
Score = 204 (76.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 94/407 (23%), Positives = 179/407 (43%)
Query: 45 PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P ++ L LS N++ T++ ++ P +L H+ LS + F L +L+L++N+
Sbjct: 361 PLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNNR 420
Query: 104 --HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
P ++ ++ +++ + N++ I+ + F GL +++ L L N++R++ F
Sbjct: 421 LSTLPIRVFKNLNQLKKLAL-NFNQLE-INWSTFRGLESMKNLQLKSNKIRALQDGVFYV 478
Query: 162 LGMLAELRVGLNVFTTLA-DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
+ + + + +N ++L+ G FN L +L L+L ++ I + + L L L++
Sbjct: 479 MHKIETIDLAMNQISSLSRQGLFN-LTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSN 537
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N + + L L RL+ L + N L+ F + L+ L + + L+ + +
Sbjct: 538 NAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLR-RNRLSWIIEDQS 596
Query: 281 ADX----XXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS----ESMLAWP 332
A I A+ GL NL LNL NA S E ML
Sbjct: 597 AAAPFKGLRKLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQVNAFEHMLRLN 656
Query: 333 ELRTIDIAENPIECGCNILWLREMLVRR---NTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
+L + + N I C C+++W ++ L R C P L + L SLS+ +L C
Sbjct: 657 KL--VFKSLNFI-CDCDLVWFQQWLKNRFPQQAEHAVCGYPEHLLDRHLKSLSSSELVCV 713
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
+ + L+ + + +T + S PT + L +EL+I
Sbjct: 714 DSPKPRVEQEPDDMLA-VNAANITLECIASSPTA--ASLAAADELKI 757
Score = 200 (75.5 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 84/324 (25%), Positives = 130/324 (40%)
Query: 121 IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 180
+ N I+ I L LR L L N+L ++ SF L L + N T + +
Sbjct: 343 VLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHLILSFNEITNVNE 402
Query: 181 GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
+F L L+ L+L L+ + F+ L+ L+ L L N+L+ I L ++ L
Sbjct: 403 HSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLE-INWSTFRGLESMKNL 461
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
++ N L+ G F + ++ +++ + R+G F I
Sbjct: 462 QLKSNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLF--NLTKLRHLNLSFNAISRI 519
Query: 301 EEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIA--------ENPIECGCNIL 351
E +L L+L NA F L L+T+++A EN +C N
Sbjct: 520 EVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKN-- 577
Query: 352 WLREMLVRRNT-SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSL 410
L E+ +RRN S + + A +K L L DL G L IS A GL+ L L
Sbjct: 578 -LEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLH--GNNLKQISTKAMSGLNNLEIL 634
Query: 411 VLTDNRLQSIPTKQLSKLTRLEEL 434
L N L SI + RL +L
Sbjct: 635 NLGSNALASIQVNAFEHMLRLNKL 658
Score = 162 (62.1 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 77/325 (23%), Positives = 128/325 (39%)
Query: 157 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSL 216
P FI L L L + N T+++ + L L LDL L I N+F + L L
Sbjct: 331 PKFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSNNLVHL 390
Query: 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 276
+L+ N + ++ + L L +LE+ N S L FK L+ LK+L + N +
Sbjct: 391 ILSFNEITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALN--FNQLEIN 448
Query: 277 KGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELR 335
F +++G + + ++L N +S S + + +LR
Sbjct: 449 WSTFRGLESMKNLQLKSNKIRA-LQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLR 507
Query: 336 TIDIAENPIECGCNILW-LREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
++++ N I W + L + S N P L L L A L
Sbjct: 508 HLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFKPQHLDCLHRLKT--LNLAHNRLQ 565
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK-----LTRLEELEIGQNGFSMLEAGCF 449
+ +N F + L L L NRL I Q + L +L L++ N +
Sbjct: 566 YLQENTFDCVKNLEELNLRRNRLSWIIEDQSAAAPFKGLRKLRRLDLHGNNLKQISTKAM 625
Query: 450 KGLSYLKRLEITGASNLTRVRKGAF 474
GL+ L+ L + G++ L ++ AF
Sbjct: 626 SGLNNLEILNL-GSNALASIQVNAF 649
Score = 130 (50.8 bits), Expect = 0.00015, P = 0.00015
Identities = 35/147 (23%), Positives = 69/147 (46%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
+TN+++++F L+ L L L++NRL ++P + L +L++L + N + F+GL
Sbjct: 397 ITNVNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLE-INWSTFRGL 455
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
+K L++ ++ + ++ G F + + L L L HLNL
Sbjct: 456 ESMKNLQLK-SNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQ-GLFNLTKLRHLNLSF 513
Query: 513 NAFTSFSESMLAWPE-LRTIDIAENPI 538
NA + + + L +D++ N I
Sbjct: 514 NAISRIEVDTWEFTQSLEVLDLSNNAI 540
>UNIPROTKB|E7EW58 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886
InterPro:IPR003591 SMART:SM00369 GO:GO:0001934 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 HGNC:HGNC:17200
EMBL:AC004142 IPI:IPI00924926 ProteinModelPortal:E7EW58 SMR:E7EW58
Ensembl:ENST00000421101 ArrayExpress:E7EW58 Bgee:E7EW58
Uniprot:E7EW58
Length = 273
Score = 209 (78.6 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 66/225 (29%), Positives = 106/225 (47%)
Query: 23 STRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLI 82
ST D CN + L P+ + Q L+L TN I ++ + ++L +DLS
Sbjct: 51 STVD--CN--DLGLLTFPARLPANTQILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSS 106
Query: 83 IPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
+ + +L+ + L NK P++ + + + + + I N +S I F GL
Sbjct: 107 VTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYI-NHNLLSTISPGAFIGLHN 165
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
L L+L+ N+L+ + + F L L L +G N + D F L L +L + G LT
Sbjct: 166 LLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLT 225
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
I DNA GL L S+ DNRL +P L K+ L+ L++ +N
Sbjct: 226 EIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKN 270
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 58/195 (29%), Positives = 81/195 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I++I+ + + L L L N L SV + + L + + N T L + +
Sbjct: 79 NNIAKIEYST-DFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLS 137
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L L + L+ IS AF GL L L L NRLQ I +K L LE L IG+
Sbjct: 138 ELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGE 197
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N ++ FK L L+ L I G NLT + A + A
Sbjct: 198 NPIIRIKDMNFKPLINLRSLVIAGI-NLTEIPDNALVGLENLESISFYDNRLIK-VPHVA 255
Query: 305 LVGLPNLYHLNLKEN 319
L + NL L+L +N
Sbjct: 256 LQKVVNLKFLDLNKN 270
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 38/141 (26%), Positives = 61/141 (43%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN +S + + + L +YL++N+L +P L L EL + N+ +T++ GAF
Sbjct: 101 QNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAF 160
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L L L I+ F L L L++ +N + I L L L I
Sbjct: 161 IGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIA 220
Query: 244 QNGFSMLEAGCFKGLSYLKRL 264
+ + GL L+ +
Sbjct: 221 GINLTEIPDNALVGLENLESI 241
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 38/134 (28%), Positives = 67/134 (50%)
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFC--NSPAPLKYKSLISLSAEDL 386
W R+I + + ++C N L L R NT + N+ A ++Y + ++ L
Sbjct: 40 WFTPRSIYMEASTVDC--NDLGLLTFPARLPANTQILLLQTNNIAKIEYSTDFPVNLTGL 97
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 446
+ L+++++ + + L S+ L +N+L +P K LS+L+ L+EL I N S +
Sbjct: 98 DLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISP 157
Query: 447 GCFKGLSYLKRLEI 460
G F GL L RL +
Sbjct: 158 GAFIGLHNLLRLHL 171
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 62/210 (29%), Positives = 86/210 (40%)
Query: 308 LP-NLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF 366
LP N L L+ N S L +D+++N + NI +++M +V+
Sbjct: 67 LPANTQILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSSVTNIN-VKKM---PQLLSVY 122
Query: 367 C--NSPAPLKYKSLISLS-AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
N L K L LS ++L L+ IS AF GL L L L NRLQ I +K
Sbjct: 123 LEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSK 182
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
L LE L IG+N ++ FK L L+ L I G NLT + A
Sbjct: 183 WFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGI-NLTEIPDNALVGLENLESI 241
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKEN 513
+ AL + NL L+L +N
Sbjct: 242 SFYDNRLIKV-PHVALQKVVNLKFLDLNKN 270
>UNIPROTKB|F1NZH1 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099859 OMA:YFELKAN
EMBL:AADN02029493 EMBL:AADN02029494 EMBL:AADN02029495
IPI:IPI00573056 Ensembl:ENSGALT00000027325 Uniprot:F1NZH1
Length = 826
Score = 160 (61.4 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 64/247 (25%), Positives = 102/247 (41%)
Query: 343 PIECGCNILWLREMLVR---RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
PI C C L +L+ RN ++ P P K LI AG + + +
Sbjct: 328 PIPCHCTSHMLSGVLMHCQERNIESLSDLGPPPTNPKKLI--------LAGNIIQTLLKS 379
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
+ L L L +NR++ + LTRL++L + N + L F GL +L+ L
Sbjct: 380 DLMDYASLEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLTKLSQNLFLGLQHLEYLY 439
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+ + + V G F + + G+P L LNLK N F+
Sbjct: 440 LE-YNAIKEVLPGTF-NTMPKLKVLYLNNNLLQTLPPHIFSGVP-LARLNLKTNQFSHLP 496
Query: 520 ESMLA--WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLI 573
S + L I++ NP +C C+ + W++++ +FC SP LK K L
Sbjct: 497 VSNVLDELDMLVQIELENNPWDCTCDSVGLQKWIQKLSKSTMMGGIFCKSPGHLKKKELK 556
Query: 574 SLSAEDL 580
SL++E L
Sbjct: 557 SLNSEVL 563
Score = 148 (57.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 57/211 (27%), Positives = 89/211 (42%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
+ L L L +NR++ + LTRL++L + N + L F GL +L+ L + +
Sbjct: 385 ASLEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLTKLSQNLFLGLQHLEYLYLE-YN 443
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
+ V G F + + G+P L LNLK N F+ S +
Sbjct: 444 AIKEVLPGTF-NTMPKLKVLYLNNNLLQTLPPHIFSGVP-LARLNLKTNQFSHLPVSNVL 501
Query: 331 --WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAE 384
L I++ NP +C C+ + W++++ +FC SP LK K L SL++E
Sbjct: 502 DELDMLVQIELENNPWDCTCDSVGLQKWIQKLSKSTMMGGIFCKSPGHLKKKELKSLNSE 561
Query: 385 ----DLGCAGAGLTNISDNAFRGLSGLRSLV 411
DL C T S+ A L L V
Sbjct: 562 VLCPDLSCKTT--TTTSNTAGTILQSLTDAV 590
Score = 127 (49.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI +++ F LT L+ LYL+ N L + F+ L L L + N + G
Sbjct: 393 GNNRIEILEEGAFMNLTRLQKLYLNGNHLTKLSQNLFLGLQHLEYLYLEYNAIKEVLPGT 452
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
FN + +L L L L + + F G+ L L L N+ +P L +L L ++E
Sbjct: 453 FNTMPKLKVLYLNNNLLQTLPPHIFSGVP-LARLNLKTNQFSHLPVSNVLDELDMLVQIE 511
Query: 242 IGQN 245
+ N
Sbjct: 512 LENN 515
Score = 125 (49.1 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 38/124 (30%), Positives = 60/124 (48%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N I+ I+ F GL L+ L+++ N L + +F L L L+ N T + A
Sbjct: 95 GFNNIADIEPGAFNGLNLLKQLHINHNSLEILKEDTFDGLENLEFLQADNNFITVIEASA 154
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
F+ L RL L L + + N FR + L L L N+LQ++P L + R+ +L+
Sbjct: 155 FSKLSRLKVLILNDNAIEYLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEHIGRILDLQ 213
Query: 242 IGQN 245
+ N
Sbjct: 214 LEDN 217
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 63/242 (26%), Positives = 96/242 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+L GLT + N F GL SL L N + I + L L++L I N +L+
Sbjct: 68 LNLLNNGLTMLHVNDFAGLVNAISLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEILK 127
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L+ + +T + AF+ + +P L
Sbjct: 128 EDTFDGLENLEFLQADN-NFITVIEASAFSKLSRLKVLILNDNAIEY-LPPNIFRFVP-L 184
Query: 312 YHLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRNT 362
HL+L+ N + F E + + + + +N C C++L WL M +
Sbjct: 185 THLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCDLLQLKTWLENMPPQSII 241
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS-IP 421
V CNSP +K L L E L C + + D SG LV+T + S +
Sbjct: 242 GDVVCNSPPVIKGSILNRLRKESL-CPIPTASELEDP-----SGSLPLVVTTSVSDSHLS 295
Query: 422 TK 423
TK
Sbjct: 296 TK 297
Score = 121 (47.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 37/125 (29%), Positives = 54/125 (43%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L +N L + F L L +G N + GAFNGL L L + L +
Sbjct: 68 LNLLNNGLTMLHVNDFAGLVNAISLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEILK 127
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L +N + I SKL+RL+ L + N L F+ + L
Sbjct: 128 EDTFDGLENLEFLQADNNFITVIEASAFSKLSRLKVLILNDNAIEYLPPNIFRFVP-LTH 186
Query: 264 LEITG 268
L++ G
Sbjct: 187 LDLRG 191
Score = 121 (47.7 bits), Expect = 0.00084, P = 0.00084
Identities = 54/205 (26%), Positives = 85/205 (41%)
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
GLT + N F GL SL L N + I + L L++L I N +L+ F G
Sbjct: 74 GLTMLHVNDFAGLVNAISLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEILKEDTFDG 133
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLP-NLY---- 506
L L+ L+ + +T + AF+ I+ ++A+ LP N++
Sbjct: 134 LENLEFLQADN-NFITVIEASAFSKLSRLKVL---------ILNDNAIEYLPPNIFRFVP 183
Query: 507 --HLNLKENA-----FTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRN 555
HL+L+ N + F E + + + + +N C C++L WL M +
Sbjct: 184 LTHLDLRGNQLQTLPYVGFLEHI---GRILDLQLEDNKWACNCDLLQLKTWLENMPPQSI 240
Query: 556 TSAVFCNSPAPLKYKSLISLSAEDL 580
V CNSP +K L L E L
Sbjct: 241 IGDVVCNSPPVIKGSILNRLRKESL 265
Score = 121 (47.7 bits), Expect = 0.00084, P = 0.00084
Identities = 56/222 (25%), Positives = 92/222 (41%)
Query: 53 STNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK---HFPQ-- 107
+ + ++ ++P+ ++ D SH + +IPI + K L L+ +K FP
Sbjct: 270 TASELEDPSGSLPLVVTTSVSD-SHLSTKVIPI--LKAPTKETNLMLHTSKTTTQFPGIY 326
Query: 108 -QIVCSIISPRRVEIFGQNRISRIDQACFEGL--TALRILYLDDNQLRSVPTPSFIYLGM 164
I C S + + I+ G T + L L N ++++ +
Sbjct: 327 CPIPCHCTSHMLSGVLMHCQERNIESLSDLGPPPTNPKKLILAGNIIQTLLKSDLMDYAS 386
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L +G N L +GAF L RL L L G LT +S N F GL L L L N ++
Sbjct: 387 LEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLTKLSQNLFLGLQHLEYLYLEYNAIK 446
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ + + +L+ L + N L F G+ L RL +
Sbjct: 447 EVLPGTFNTMPKLKVLYLNNNLLQTLPPHIFSGVP-LARLNL 487
Score = 115 (45.5 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 33/116 (28%), Positives = 53/116 (45%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F GL L+L N + + +F L +L +L + N L + F+GL L L
Sbjct: 83 FAGLVNAISLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEILKEDTFDGLENLEFLQA 142
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
+T I +AF LS L+ L+L DN ++ +P + + L L++ N L
Sbjct: 143 DNNFITVIEASAFSKLSRLKVLILNDNAIEYLPPN-IFRFVPLTHLDLRGNQLQTL 197
Score = 107 (42.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 57/237 (24%), Positives = 98/237 (41%)
Query: 322 TSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISL 381
TS S+S L+ + I I + P + N++ L ++C P P S + L
Sbjct: 287 TSVSDSHLS---TKVIPILKAPTK-ETNLM-LHTSKTTTQFPGIYC--PIPCHCTSHM-L 338
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
S + C + ++SD + + L+L N +Q++ L LE L +G N
Sbjct: 339 SGVLMHCQERNIESLSDLG-PPPTNPKKLILAGNIIQTLLKSDLMDYASLEMLHLGNNRI 397
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVG 501
+LE G F L+ L++L + G ++LT++ + F ++
Sbjct: 398 EILEEGAFMNLTRLQKLYLNG-NHLTKLSQNLFLGLQHLEYLYLEYNAIKEVLP-GTFNT 455
Query: 502 LPNLYHLNLKENAFTS-----FSESMLAWPELRTIDIAENPIECGCNILWLREMLVR 553
+P L L L N + FS LA L+T + P+ N+L +MLV+
Sbjct: 456 MPKLKVLYLNNNLLQTLPPHIFSGVPLARLNLKTNQFSHLPVS---NVLDELDMLVQ 509
Score = 100 (40.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 39/151 (25%), Positives = 64/151 (42%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
+ L+L N +Q++ L LE L +G N +LE G F L+ L++L + G ++LT
Sbjct: 364 KKLILAGNIIQTLLKSDLMDYASLEMLHLGNNRIEILEEGAFMNLTRLQKLYLNG-NHLT 422
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS-----FSESM 328
++ + F + G +P L L L N + FS
Sbjct: 423 KLSQNLFLGLQHLEYLYLEYNAIKEVLP-GTFNTMPKLKVLYLNNNLLQTLPPHIFSGVP 481
Query: 329 LAWPELRTIDIAENPIECGCNILWLREMLVR 359
LA L+T + P+ N+L +MLV+
Sbjct: 482 LARLNLKTNQFSHLPVS---NVLDELDMLVQ 509
Score = 75 (31.5 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 40/159 (25%), Positives = 66/159 (41%)
Query: 40 PSHSNPSIQRL-VLSTNRIKTVDSAIPIYLSLQHV-DLSHTTWLIIPIGGFEPQEKLVEL 97
P H N L +L N + +AI ++L ++ D+ P G F L +L
Sbjct: 65 PFHLNLLNNGLTMLHVNDFAGLVNAISLHLGFNNIADIE-------P-GAFNGLNLLKQL 116
Query: 98 QLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 156
+NHN ++ + N I+ I+ + F L+ L++L L+DN + +P
Sbjct: 117 HINHNSLEILKEDTFDGLENLEFLQADNNFITVIEASAFSKLSRLKVLILNDNAIEYLP- 175
Query: 157 PSFIYLGMLAELRVGLNVFTTLAD-GAFNGLGRLSALDL 194
P+ L L + N TL G +GR+ L L
Sbjct: 176 PNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQL 214
Score = 65 (27.9 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGF-EPQEKLVELQLNHNK 103
L+L+ N I+ + I ++ L H+DL +P GF E ++++LQL NK
Sbjct: 164 LILNDNAIEYLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNK 218
>UNIPROTKB|F1SGM5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:CU462866 EMBL:CU466955
Ensembl:ENSSSCT00000014563 Uniprot:F1SGM5
Length = 886
Score = 234 (87.4 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 110/441 (24%), Positives = 184/441 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I+++ + F+ L L L N L + + L L L + N T+ A
Sbjct: 2 NNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIR 61
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L +L L +T++ +++F GL+ LR L L DN L +P + LS L L+ L +
Sbjct: 62 GLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEVPVQPLSNLPTLQALTLAL 121
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N S + F LS L L + + + + + F D + A
Sbjct: 122 NKISSIPDFAFTNLSSLVVLHLHN-NKIKSLGQHCF-DGLDNLETLDLNYNNLGEFPQ-A 178
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILW--LREM--LVR 359
+ LP+L L N+ + + P LRTI + +NP+ N + L ++ LV
Sbjct: 179 IKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVI 238
Query: 360 RNTSAVFCNSPAPLKYKSLI-SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
R S V ++ +L ++ E L G +++IS N + LR+L L+ N ++
Sbjct: 239 RGASMV-------QRFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLSYNNIK 291
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADX 477
+P+ + LEE+ + +N ++ G F+GL+ L+ L+++ NL + AFA
Sbjct: 292 DLPS--FNGCYALEEISLQRNQIHQIKEGTFQGLTSLRILDLS--RNLIHEIHDRAFAKL 347
Query: 478 XXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAE 535
E GL L L L N F E++ A + LR++ +
Sbjct: 348 GSITNLDISFNELTSFPTE----GLNGLNQLKLVGN-F-KLKEALAAKDFVNLRSLSV-- 399
Query: 536 NPIECGCNILWLREMLVRRNT 556
P C W + NT
Sbjct: 400 -PYAYQCCAFWGCDSYAHSNT 419
Score = 196 (74.1 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 92/342 (26%), Positives = 151/342 (44%)
Query: 31 LQEANLDVIPSH--SN-PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIG 86
L + +L +P SN P++Q L L+ N+I ++ D A SL + L + +
Sbjct: 95 LDDNSLTEVPVQPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQH 154
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F+ + L L LN+N FPQ I ++ S + + +F N IS I F+G LR +
Sbjct: 155 CFDGLDNLETLDLNYNNLGEFPQAIK-ALPSLKEL-LFHSNSISVIPDGAFDGNPLLRTI 212
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+L DN L V +F L L L + G ++ + G L +L L G +++IS
Sbjct: 213 HLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQRFPN--LTGTVHLESLTLTGTKISSIS 270
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
N + LR+L L+ N ++ +P+ + LEE+ + +N ++ G F+GL+ L+
Sbjct: 271 SNLCQEQKMLRTLDLSYNNIKDLPS--FNGCYALEEISLQRNQIHQIKEGTFQGLTSLRI 328
Query: 264 LEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFT 322
L+++ NL + AFA EG L L L L N F
Sbjct: 329 LDLS--RNLIHEIHDRAFAKLGSITNLDISFNELTSFPTEG----LNGLNQLKLVGN-F- 380
Query: 323 SFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNT 362
E++ A + LR++ + P C W + NT
Sbjct: 381 KLKEALAAKDFVNLRSLSV---PYAYQCCAFWGCDSYAHSNT 419
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 66/225 (29%), Positives = 103/225 (45%)
Query: 50 LVLSTNRIKTVDS-AIPIYLSLQ--HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--H 104
L L N++KTV S AI +LQ +D +H T +P FE +L L L+ N
Sbjct: 45 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT--SVPEDSFEGLTQLRHLWLDDNSLTE 102
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
P Q + ++ + + + + N+IS I F L++L +L+L +N+++S+ F L
Sbjct: 103 VPVQPLSNLPTLQALTL-ALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDN 161
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N A L L L ++ I D AF G LR++ L DN L
Sbjct: 162 LETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 220
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITG 268
+ L+ L L I G SM++ G +L+ L +TG
Sbjct: 221 FVGNSAFHNLSDLHSLVI--RGASMVQRFPNLTGTVHLESLTLTG 263
Score = 152 (58.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 85/376 (22%), Positives = 152/376 (40%)
Query: 172 LNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 231
+N T L + AF L L L G L+ I A GL L+ L L +N+L+++P++ +
Sbjct: 1 MNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAI 60
Query: 232 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 291
L+ L+ L + N + + F+GL+ L+ L + S LT V ++
Sbjct: 61 RGLSALQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNS-LTEVPVQPLSNLPTLQALTL 119
Query: 292 XXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPI----EC 346
I + A L +L L+L N S + L T+D+ N + +
Sbjct: 120 ALNKISS-IPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGEFPQA 178
Query: 347 GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
+ L+E+L N+ +V + L ++ D L+ + ++AF LS
Sbjct: 179 IKALPSLKELLFHSNSISVIPDGAFDGN-PLLRTIHLYD-----NPLSFVGNSAFHNLSD 232
Query: 407 LRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 465
L SLV+ + +Q P L+ LE L + S + + + L+ L+++ +N
Sbjct: 233 LHSLVIRGASMVQRFPN--LTGTVHLESLTLTGTKISSISSNLCQEQKMLRTLDLS-YNN 289
Query: 466 LTRVRK--GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML 523
+ + G +A I+E GL +L L+L N +
Sbjct: 290 IKDLPSFNGCYA-----LEEISLQRNQIHQIKEGTFQGLTSLRILDLSRNLIHEIHDRAF 344
Query: 524 A-WPELRTIDIAENPI 538
A + +DI+ N +
Sbjct: 345 AKLGSITNLDISFNEL 360
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 230 (86.0 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 89/355 (25%), Positives = 146/355 (41%)
Query: 127 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 186
I+ + + F ++AL L ++ N+L ++ +F LG L L + N L F +
Sbjct: 65 ITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDV 124
Query: 187 GRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 246
L +L L L I F S LR L L N L+SIP + L L +L +G+N
Sbjct: 125 NNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNS 184
Query: 247 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV 306
F+ L F+ L L+ L + + L+ + G F D + G
Sbjct: 185 FTHLSPRLFQHLGNLQVLRLH-ENRLSDIPMGTF-DALGNLQELALQENQIGTLSPGLFH 242
Query: 307 GLPNLYHLNLKENAFTSFSESM-LAWPELRTIDIAENPI-ECGCNILW----LREM-LVR 359
NL L L N + + + P+L + + N + E + LRE+ L
Sbjct: 243 NNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYN 302
Query: 360 RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
+ +++ N+ + L ++ LS L T IS AF GL+ LR L L N LQ
Sbjct: 303 NHITSLADNTFSHLNQLQVLILSHNQL-------TYISPGAFNGLTNLRELSLHTNALQD 355
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ + L L+ + + N L F ++ L +++ +NL + G F
Sbjct: 356 LDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQN-NNLENLPLGIF 409
Score = 226 (84.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 91/374 (24%), Positives = 164/374 (43%)
Query: 106 PQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 165
P + CS S +VE G ++ + ++ L+++ + + +P F+ + L
Sbjct: 26 PSECTCSRAS--QVECTGARIVAMPTPLPWNAMS-LQVV---NTHITELPENLFLNISAL 79
Query: 166 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 225
L++ N +T+ GAF LG L L L L + F+ ++ L SL+L++N+L
Sbjct: 80 IALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQ 139
Query: 226 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 285
I Q S+ + L EL++ N + F L L +L + G ++ T + F
Sbjct: 140 IQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNL-GRNSFTHLSPRLF-QHLG 197
Query: 286 XXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPI 344
I G L NL L L+EN + S + L+ + ++ N I
Sbjct: 198 NLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHI 257
Query: 345 ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISL-SAEDLGCAGAGLTNISDNAFRG 403
++++ L + N +F NS L + + +L +T+++DN F
Sbjct: 258 SQLPPGIFMQ--LPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSH 315
Query: 404 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 463
L+ L+ L+L+ N+L I + LT L EL + N L++ F+ L+ L+ + +
Sbjct: 316 LNQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQ-- 373
Query: 464 SNLTRVRKGA-FAD 476
SN R G+ FA+
Sbjct: 374 SNRLRQLPGSIFAN 387
Score = 221 (82.9 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 109/435 (25%), Positives = 174/435 (40%)
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
++PTP + M ++ V ++ T L + F + L AL + L+ I AFR L
Sbjct: 46 AMPTP-LPWNAMSLQV-VNTHI-TELPENLFLNISALIALKMEKNELSTIMPGAFRNLGS 102
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
LR L L +N+L+ +P + + LE L + N ++ F S L+ L++ G +NL
Sbjct: 103 LRYLSLANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHG-NNL 161
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AW 331
+ + AF D + L NL L L EN + A
Sbjct: 162 ESIPEEAF-DHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDAL 220
Query: 332 PELRTIDIAENPI-ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAG 390
L+ + + EN I + L R S + P + L L+ L G
Sbjct: 221 GNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNK--LTLFG 278
Query: 391 AGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 450
L +S F + LR L L +N + S+ S L +L+ L + N + + G F
Sbjct: 279 NSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFN 338
Query: 451 GLSYLKRLEI-TGA-SNL-TRV-RKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
GL+ L+ L + T A +L + V R A + L + L
Sbjct: 339 GLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTI-QLQ 397
Query: 507 HLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAV-FC 561
+ NL EN + ++ ELR D NP C +IL WL R T + C
Sbjct: 398 NNNL-ENLPLGIFDHLVNLCELRLYD---NPWRCDSDILPLHNWLLLNRARLGTDTLPVC 453
Query: 562 NSPAPLKYKSLISLS 576
+SPA ++ +SL+ ++
Sbjct: 454 SSPANVRGQSLVIIN 468
Score = 217 (81.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 84/365 (23%), Positives = 146/365 (40%)
Query: 101 HNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
H P+ + +I + +++ +N +S I F L +LR L L +N+LR +P F
Sbjct: 64 HITELPENLFLNISALIALKM-EKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVFQ 122
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
+ L L + N + F+ L L L G L +I + AF L GL L L
Sbjct: 123 DVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGR 182
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N + + L L+ L + +N S + G F L L+ L + + + + G F
Sbjct: 183 NSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQ-ENQIGTLSPGLF 241
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDI 339
+ + G + LP L L L N+ S + P LR + +
Sbjct: 242 HNNRNLQRLYLSNNHISQ-LPPGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWL 300
Query: 340 AENPIECGCNILWLR----EMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTN 395
N I + + ++L+ + + + P + L +L +L L +
Sbjct: 301 YNNHITSLADNTFSHLNQLQVLILSHNQLTYIS---PGAFNGLTNL--RELSLHTNALQD 355
Query: 396 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 455
+ N FR L+ L+++ L NRL+ +P + + L +++ N L G F L L
Sbjct: 356 LDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHLVNL 415
Query: 456 KRLEI 460
L +
Sbjct: 416 CELRL 420
Score = 212 (79.7 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 96/393 (24%), Positives = 174/393 (44%)
Query: 56 RIKTVDSAIPIY-LSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCS 112
RI + + +P +SLQ V+ +H T L P F L+ L++ N+ +
Sbjct: 43 RIVAMPTPLPWNAMSLQVVN-THITEL--PENLFLNISALIALKMEKNELSTIMPGAFRN 99
Query: 113 IISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 172
+ S R + + N++ + F+ + L L L +NQL + F L EL++
Sbjct: 100 LGSLRYLSL-ANNKLRMLPIRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHG 158
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N ++ + AF+ L L+ L+L T++S F+ L L+ L L +NRL IP
Sbjct: 159 NNLESIPEEAFDHLVGLTKLNLGRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFD 218
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
L L+EL + +N L G F L+RL ++ ++++++ G F
Sbjct: 219 ALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSN-NHISQLPPGIFMQLPQLNKLTLF 277
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENP---IECGC 348
+ G +PNL L L N TS +++ + +L+ + ++ N I G
Sbjct: 278 GNSLRE-LSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGA 336
Query: 349 -NILW-LREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
N L LRE+ + N ++ ++SL +L +++ L + + F ++G
Sbjct: 337 FNGLTNLRELSLHTNALQDLDSNV----FRSLANL--QNISLQSNRLRQLPGSIFANVNG 390
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L ++ L +N L+++P L L EL + N
Sbjct: 391 LTTIQLQNNNLENLPLGIFDHLVNLCELRLYDN 423
Score = 202 (76.2 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 74/306 (24%), Positives = 133/306 (43%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYLSLQHVD---LSHTTWLIIPIGGFEPQEKLVELQLNHN 102
S++ L L+ N+++ + I ++ + +++ LS+ + I F L ELQL+ N
Sbjct: 102 SLRYLSLANNKLRMLP--IRVFQDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGN 159
Query: 103 --KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
+ P++ ++ ++ + G+N + + F+ L L++L L +N+L +P +F
Sbjct: 160 NLESIPEEAFDHLVGLTKLNL-GRNSFTHLSPRLFQHLGNLQVLRLHENRLSDIPMGTFD 218
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
LG L EL + N TL+ G F+ L L L ++ + F L L L L
Sbjct: 219 ALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFG 278
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N L+ + + L EL + N + L F L+ L+ L I + LT + GAF
Sbjct: 279 NSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQVL-ILSHNQLTYISPGAF 337
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDI 339
+ ++ L NL +++L+ N S+ A L TI +
Sbjct: 338 -NGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQL 396
Query: 340 AENPIE 345
N +E
Sbjct: 397 QNNNLE 402
Score = 201 (75.8 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 62/224 (27%), Positives = 99/224 (44%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQL--NHN 102
++Q L L NR+ + L +LQ + L + G F L L L NH
Sbjct: 198 NLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHI 257
Query: 103 KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
P I + ++ +FG N + + F + LR L+L +N + S+ +F +L
Sbjct: 258 SQLPPGIFMQLPQLNKLTLFG-NSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHL 316
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N T ++ GAFNGL L L L L ++ N FR L+ L+++ L NR
Sbjct: 317 NQLQVLILSHNQLTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNR 376
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L+ +P + + L +++ N L G F L L L +
Sbjct: 377 LRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDHLVNLCELRL 420
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 58/197 (29%), Positives = 85/197 (43%)
Query: 31 LQEANLDVI-PS--HSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIG 86
LQE + + P H+N ++QRL LS N I + I + L L + L + + G
Sbjct: 228 LQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSLRELSPG 287
Query: 87 GFEPQEKLVELQLNHNKHFPQQI--VCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F P L EL L +N H S ++ +V I N+++ I F GLT LR L
Sbjct: 288 VFGPMPNLRELWL-YNNHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGLTNLREL 346
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L N L+ + + F L L + + N L F + L+ + L+ L N+
Sbjct: 347 SLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNNLENLPL 406
Query: 205 NAFRGLSGLRSLVLTDN 221
F L L L L DN
Sbjct: 407 GIFDHLVNLCELRLYDN 423
Score = 147 (56.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 52/203 (25%), Positives = 90/203 (44%)
Query: 46 SIQRLVLSTNRIKTVDSAI-PIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQL--NHN 102
++Q L L N+I T+ + +LQ + LS+ +P G F +L +L L N
Sbjct: 222 NLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNKLTLFGNSL 281
Query: 103 KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ + + + R + ++ N I+ + F L L++L L NQL + +F L
Sbjct: 282 RELSPGVFGPMPNLRELWLYN-NHITSLADNTFSHLNQLQVLILSHNQLTYISPGAFNGL 340
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L EL + N L F L L + L+ L + + F ++GL ++ L +N
Sbjct: 341 TNLRELSLHTNALQDLDSNVFRSLANLQNISLQSNRLRQLPGSIFANVNGLTTIQLQNNN 400
Query: 223 LQSIPTKQLSKLTRLEELEIGQN 245
L+++P L L EL + N
Sbjct: 401 LENLPLGIFDHLVNLCELRLYDN 423
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 231 (86.4 bits), Expect = 8.5e-16, P = 8.5e-16
Identities = 107/390 (27%), Positives = 162/390 (41%)
Query: 16 PYEPSRFSTRDPSCNL-QEANLDVIPSHSN-PSIQRLV---LSTNRIKTVDSAIPIYL-- 68
P P R + P L L V+P S+ PS ++ L N I + +A +
Sbjct: 25 PVCPERCDCQHPQHLLCTNRGLRVVPKTSSLPSPHDVLTYSLGGNFITNI-TAFDFHRLG 83
Query: 69 SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISP-RRVEIF--GQN 125
L+ +DL + + FE +L EL L +N Q + ++P R++ I N
Sbjct: 84 QLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNN--LLQALAPGTLAPLRKLRILYANGN 141
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 185
ISR+ + FEGL +L L LD N L ++P F LG L L + N L AF
Sbjct: 142 EISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQ 201
Query: 186 LGRLSALDLRGAGLTNISDNA--FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
LG+L L+L L +A F L L SL+L+ N LQ + + L RL L +
Sbjct: 202 LGKLRFLNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLR 261
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
N + L F GL L+ L + G + L+++ A + +
Sbjct: 262 GNQLTHLAPEAFWGLEALRELRLEG-NRLSQLPT-ALLEPLHSLEALDLSGNELSALHPA 319
Query: 304 ALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNIL----WLREMLV 358
L L L+L+ NA ++ S + A P L +D+ N C C + W+ +
Sbjct: 320 TFGHLGRLRELSLRNNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGDWHS 379
Query: 359 RRNTSAVF--CNSPAPLKYKSLISLSAEDL 386
+ VF C P L+ K L L + L
Sbjct: 380 QGRLLTVFVQCRHPPALRGKYLDYLDDQQL 409
Score = 216 (81.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 76/273 (27%), Positives = 123/273 (45%)
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
L G +TNI+ F L LR L L N+++S+ K KL+RLEEL +G N L G
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPG 125
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYH 313
L L+ L G + ++R+ +G+F + + + L NL +
Sbjct: 126 TLAPLRKLRILYANG-NEISRLSRGSF-EGLESLVKLRLDGNALGALPDAVFAPLGNLLY 183
Query: 314 LNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP-- 370
L+L+ N ++ A +LR ++++ N ++ ++ R+ S++ ++
Sbjct: 184 LHLESNRIRFLGKNAFAQLGKLRFLNLSANELQP--SLRHAATFAPLRSLSSLILSANNL 241
Query: 371 ---APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
P ++ L L L G LT+++ AF GL LR L L NRL +PT L
Sbjct: 242 QHLGPRIFQHLPRLGL--LSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALLEP 299
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
L LE L++ N S L F L L+ L +
Sbjct: 300 LHSLEALDLSGNELSALHPATFGHLGRLRELSL 332
Score = 130 (50.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 41/151 (27%), Positives = 71/151 (47%)
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
G +TNI+ F L LR L L N+++S+ K KL+RLEEL +G N L G
Sbjct: 68 GNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTL 127
Query: 450 KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLN 509
L L+ L G + ++R+ +G+F + + + L NL +L+
Sbjct: 128 APLRKLRILYANG-NEISRLSRGSF-EGLESLVKLRLDGNALGALPDAVFAPLGNLLYLH 185
Query: 510 LKENAFTSFSESMLAW-PELRTIDIAENPIE 539
L+ N ++ A +LR ++++ N ++
Sbjct: 186 LESNRIRFLGKNAFAQLGKLRFLNLSANELQ 216
>MGI|MGI:2182081 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2182081
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:AF300458 EMBL:DQ177325 EMBL:BC117834 IPI:IPI00169875
RefSeq:NP_619623.2 UniGene:Mm.443660 ProteinModelPortal:Q99PH1
SMR:Q99PH1 DIP:DIP-46449N STRING:Q99PH1 PhosphoSite:Q99PH1
PRIDE:Q99PH1 Ensembl:ENSMUST00000062304 GeneID:192198
KEGG:mmu:192198 UCSC:uc009bcu.1 InParanoid:Q149E5 NextBio:371238
Bgee:Q99PH1 CleanEx:MM_LRRC4 Genevestigator:Q99PH1
GermOnline:ENSMUSG00000049939 Uniprot:Q99PH1
Length = 652
Score = 229 (85.7 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 81/253 (32%), Positives = 118/253 (46%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G+N I +I+ F GL +L L L DN L +P+ +F YL L EL + N ++ A
Sbjct: 106 GRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYA 165
Query: 183 FNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 241
FN + L LDL L IS+ AF GL L+ L L ++ +P L+ L LEELE
Sbjct: 166 FNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLEELE 223
Query: 242 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE 301
+ N F + G F GLS LK+L + S ++ + + AF D +
Sbjct: 224 MSGNHFPEIRPGSFHGLSSLKKLWVMN-SQVSLIERNAF-DGLASLVELNLAHNNLSSLP 281
Query: 302 EGALVGLPNLYHLNLKENAFTSFSESM-LAWPELRTIDIAENPIECG-CNI-LWLR-EML 357
L L L+L N + + + LAW LR I N CG C+ + +R L
Sbjct: 282 HDLFTPLRYLVELHLHHNPWNCDCDILWLAW-WLREY-IPTNSTCCGRCHAPMHMRGRYL 339
Query: 358 VRRNTSAVFCNSP 370
V + +A C++P
Sbjct: 340 VEVDQAAFQCSAP 352
Score = 198 (74.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 68/223 (30%), Positives = 107/223 (47%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWL-IIP 84
NL E N+ +I + + + L L N I+ ++ A SL ++L WL +IP
Sbjct: 80 NLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL-FDNWLTVIP 138
Query: 85 IGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
G FE KL EL L +N + P + S R+++ ++ I + FEGL L+
Sbjct: 139 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 198
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L ++ +P + + +G L EL + N F + G+F+GL L L + + ++ I
Sbjct: 199 YLNLGMCNIKDMPNLTPL-VG-LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 256
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
NAF GL+ L L L N L S+P + L L EL + N
Sbjct: 257 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 299
Score = 198 (74.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 72/273 (26%), Positives = 114/273 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F L L +L L N +R + +F L L L + N T + GAF
Sbjct: 83 ENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAF 142
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + L L L + +L+ I L L+ L +
Sbjct: 143 EYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 202
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ + L L+ LE++G ++ +R G+F IE
Sbjct: 203 GM--CNIKDMPNLTPLVGLEELEMSG-NHFPEIRPGSF-HGLSSLKKLWVMNSQVSLIER 258
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A GL +L LNL N +S + P L + + NP C C+ILWL RE
Sbjct: 259 NAFDGLASLVELNLAHNNLSSLPHDLFT-PLRYLVELHLHHNPWNCDCDILWLAWWLREY 317
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
+ +T C++P ++ + L+ + C+
Sbjct: 318 IPTNSTCCGRCHAPMHMRGRYLVEVDQAAFQCS 350
Score = 174 (66.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/132 (34%), Positives = 71/132 (53%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + +F +L L L++G N + GAFNGL L+ L+L LT
Sbjct: 77 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTV 136
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
I AF LS LR L L +N ++SIP+ +++ L L++G+ + G F+GL
Sbjct: 137 IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFN 196
Query: 261 LKRLEITGASNL 272
LK L + G N+
Sbjct: 197 LKYLNL-GMCNI 207
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 66/234 (28%), Positives = 97/234 (41%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S R L L +N +Q I L LE L++G+N +E G F GL+ L LE+ +
Sbjct: 74 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD-N 132
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESML 329
LT + GAF + I A +P+L L+L E SE
Sbjct: 133 WLTVIPSGAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEG-- 189
Query: 330 AWPELRTIDIAENPIECG-CNILWLREM--LVRRNTSAVFCNSPAPLKYKSLISLSA-ED 385
A+ L + + G CNI + + LV + N ++ S LS+ +
Sbjct: 190 AFEGLFNLKY----LNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKK 245
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L + ++ I NAF GL+ L L L N L S+P + L L EL + N
Sbjct: 246 LWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 299
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 60/247 (24%), Positives = 100/247 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
+V T L +P + + TR L + +N M++A F+ L +L+ L++ G +++ ++
Sbjct: 58 VVCTRRGLSEVP-QGIPSNTRY--LNLMENNIQMIQADTFRHLHHLEVLQL-GRNSIRQI 113
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA L L L L+ N S S + P L
Sbjct: 114 EVGAF-NGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSL 172
Query: 335 RTIDIAE-NPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGL 393
+D+ E +E + + + + CN L+ L E+L +G
Sbjct: 173 MRLDLGELKKLEYISEGAF-EGLFNLKYLNLGMCNIKDMPNLTPLVGL--EELEMSGNHF 229
Query: 394 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 453
I +F GLS L+ L + ++++ I L L EL + N S L F L
Sbjct: 230 PEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 289
Query: 454 YLKRLEI 460
YL L +
Sbjct: 290 YLVELHL 296
Score = 130 (50.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 67/280 (23%), Positives = 114/280 (40%)
Query: 307 GLP-NLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNI-LWLREMLVRRNTS 363
G+P N +LNL EN +++ L + + N I I + L NT
Sbjct: 71 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR---QIEVGAFNGLASLNTL 127
Query: 364 AVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIP 421
+F N + + LS +L + +I AF + L L L + +L+ I
Sbjct: 128 ELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS 187
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 481
L L+ L +G ++ + L L+ LE++G ++ +R G+F
Sbjct: 188 EGAFEGLFNLKYLNLGM--CNIKDMPNLTPLVGLEELEMSG-NHFPEIRPGSF-HGLSSL 243
Query: 482 XXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIE 539
+IE +A GL +L LNL N +S + P L + + NP
Sbjct: 244 KKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT-PLRYLVELHLHHNPWN 302
Query: 540 CGCNILWL----REMLVRRNTSAVFCNSPAPLKYKSLISL 575
C C+ILWL RE + +T C++P ++ + L+ +
Sbjct: 303 CDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLVEV 342
>RGD|1307733 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein coupled
receptor 5" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS50262
PROSITE:PS51450 RGD:1307733 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH473960
GeneTree:ENSGT00650000092962 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B IPI:IPI00360187 RefSeq:NP_001100254.1
UniGene:Rn.214063 Ensembl:ENSRNOT00000005814 GeneID:299802
KEGG:rno:299802 UCSC:RGD:1307733 NextBio:645794 Uniprot:D4AC13
Length = 907
Score = 231 (86.4 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 99/382 (25%), Positives = 159/382 (41%)
Query: 95 VELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSV 154
++L +N+ P ++ + + + G N ++ I + F GL +L++L L +NQLR V
Sbjct: 71 LDLSMNNISQLPASLLHRLRFLEELRLAG-NALTHIPKGAFAGLHSLKVLMLQNNQLRQV 129
Query: 155 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLR 214
P + L L LR+ N + + F+GL L L L LT++ AFR LS L+
Sbjct: 130 PEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQ 189
Query: 215 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
++ L N++ I L+ L L + N L CF GL L+ L++ +NL
Sbjct: 190 AMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLN-YNNLDE 248
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENA--FTSFSESMLAWP 332
I E A VG P+L ++ +N F S + P
Sbjct: 249 FPTAI--KTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGIS-AFQHLP 305
Query: 333 ELRTI------DIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
ELRT+ I E P G L E L T A + P + L +L DL
Sbjct: 306 ELRTLTLNGASQITEFPDLTGTATL---ESLTL--TGAKISSLPQTV-CDQLPNLQVLDL 359
Query: 387 GCAGAGLTNISDN--AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
N+ ++ + G L+ + L N + I +L L L + +N +++
Sbjct: 360 SY------NLLEDLPSLSGCQKLQKIDLRHNEIYEIKGGTFQQLFNLRSLNLARNKIAII 413
Query: 445 EAGCFKGLSYLKRLEITGASNL 466
F L L +L+++ SNL
Sbjct: 414 HPNAFSTLPSLIKLDLS--SNL 433
Score = 204 (76.9 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 98/414 (23%), Positives = 166/414 (40%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N IS++ + L L L L N L +P +F L L L + N + + A
Sbjct: 76 NNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQVPEEALQ 135
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L +L L ++ + + F GL LR L L DN L +P + L+ L+ + +
Sbjct: 136 NLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLAL 195
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + F LS L L + + + + K F D A
Sbjct: 196 NKIHHIADHAFGNLSSLVVLHLHN-NRIHSLGKKCF-DGLHSLETLDLNYNNLDEFPT-A 252
Query: 305 LVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRNT 362
+ L NL L N S E + + P L TI +NPI+ G + + L T
Sbjct: 253 IKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGISAF---QHLPELRT 309
Query: 363 SAVFCNSPAPL-KYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
+ N + + ++ L + E L GA ++++ L L+ L L+ N L+ +
Sbjct: 310 LTL--NGASQITEFPDLTGTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNLLEDL 367
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 480
P+ LS +L+++++ N ++ G F+ L L+ L + + + + AF+
Sbjct: 368 PS--LSGCQKLQKIDLRHNEIYEIKGGTFQQLFNLRSLNLA-RNKIAIIHPNAFS----T 420
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN-AFTSFSESMLAWPELRTIDI 533
++ + GL L HL L N A S S +PEL+ I++
Sbjct: 421 LPSLIKLDLSSNLLSSFPVTGLHGLTHLKLTGNRALQSLIPSA-NFPELKIIEM 473
Score = 197 (74.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 91/382 (23%), Positives = 148/382 (38%)
Query: 145 YLD--DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
YLD N + +P L L ELR+ N T + GAF GL L L L+ L +
Sbjct: 70 YLDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLHSLKVLMLQNNQLRQV 129
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ A + L L+SL L N + +P S L L L + N + + F+ LS L+
Sbjct: 130 PEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQ 189
Query: 263 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFT 322
+ + + + + AF + + + GL +L L+L N
Sbjct: 190 AMTLA-LNKIHHIADHAFGNLSSLVVLHLHNNRIHS-LGKKCFDGLHSLETLDLNYNNLD 247
Query: 323 SFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV---FCNSPAPLKYKSLI 379
F ++ L+ + N NI + E N S + F ++P S
Sbjct: 248 EFPTAIKTLSNLKELGFHSN------NIRSIPERAFVGNPSLITIHFYDNPIQFVGISAF 301
Query: 380 SLSAE--DLGCAGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
E L GA +T D G + L SL LT ++ S+P +L L+ L++
Sbjct: 302 QHLPELRTLTLNGASQITEFPD--LTGTATLESLTLTGAKISSLPQTVCDQLPNLQVLDL 359
Query: 437 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEE 496
N L + G L+++++ + + ++ G F II
Sbjct: 360 SYNLLEDLPS--LSGCQKLQKIDLRH-NEIYEIKGGTFQQLFNLRSLNLARNKIA-IIHP 415
Query: 497 DALVGLPNLYHLNLKENAFTSF 518
+A LP+L L+L N +SF
Sbjct: 416 NAFSTLPSLIKLDLSSNLLSSF 437
Score = 162 (62.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 100/409 (24%), Positives = 160/409 (39%)
Query: 187 GR-LSALDLRGAGLTNISDNAFRGLSGLRS-LVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GR L +D GL+ + N LS S L L+ N + +P L +L LEEL +
Sbjct: 44 GRMLLRVDCSDLGLSELPSN----LSVFTSYLDLSMNNISQLPASLLHRLRFLEELRLAG 99
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + + G F GL LK L + + L +V + A + +
Sbjct: 100 NALTHIPKGAFAGLHSLKVLMLQN-NQLRQVPEEALQNLRSLQSLRLDANHISY-VPPSC 157
Query: 305 LVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILW--LREMLVRR- 360
GL +L HL L +NA T ++ + L+ + +A N I + + L ++V
Sbjct: 158 FSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHL 217
Query: 361 NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISD--NAFRGLSGLRSLVLTDNRLQ 418
+ + + +S + L SL DL N+ + A + LS L+ L N ++
Sbjct: 218 HNNRI--HSLGKKCFDGLHSLETLDLN-----YNNLDEFPTAIKTLSNLKELGFHSNNIR 270
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
SIP + L + N + F+ L L+ L + GAS +T F D
Sbjct: 271 SIPERAFVGNPSLITIHFYDNPIQFVGISAFQHLPELRTLTLNGASQITE-----FPDLT 325
Query: 479 XXXXXXXXXXXXXXI--IEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAEN 536
I + + LPNL L+L N S+ +L+ ID+ N
Sbjct: 326 GTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYNLLEDLP-SLSGCQKLQKIDLRHN 384
Query: 537 PI---ECGC--NILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 580
I + G + LR + + RN A+ P + +L SL DL
Sbjct: 385 EIYEIKGGTFQQLFNLRSLNLARNKIAII----HPNAFSTLPSLIKLDL 429
Score = 161 (61.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 58/196 (29%), Positives = 86/196 (43%)
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSA-----------LDLRGAGLTNISDNAFRGL 210
LG L+EL L+VFT+ D + N + +L A L L G LT+I AF GL
Sbjct: 55 LG-LSELPSNLSVFTSYLDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGL 113
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
L+ L+L +N+L+ +P + L L L+ L + N S + CF GL L+ L + +
Sbjct: 114 HSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNA 173
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML- 329
LT V AF I + A L +L L+L N S +
Sbjct: 174 -LTDVPVQAFRSLSALQAMTLALNKIHH-IADHAFGNLSSLVVLHLHNNRIHSLGKKCFD 231
Query: 330 AWPELRTIDIAENPIE 345
L T+D+ N ++
Sbjct: 232 GLHSLETLDLNYNNLD 247
Score = 160 (61.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 74/299 (24%), Positives = 128/299 (42%)
Query: 46 SIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
++Q + L+ N+I + D A SL + L + + F+ L L LN+N
Sbjct: 187 ALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
FP I +S + F N I I + F G +L ++ DN ++ V +F +L
Sbjct: 247 DEFPTAI--KTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGISAFQHL 304
Query: 163 GMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L + G + T D G L +L L GA ++++ L L+ L L+ N
Sbjct: 305 PELRTLTLNGASQITEFPD--LTGTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLSYN 362
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L+ +P+ LS +L+++++ N ++ G F+ L L+ L + + + + AF+
Sbjct: 363 LLEDLPS--LSGCQKLQKIDLRHNEIYEIKGGTFQQLFNLRSLNLA-RNKIAIIHPNAFS 419
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN-AFTSFSESMLAWPELRTIDI 339
+ + GL L HL L N A S S +PEL+ I++
Sbjct: 420 ----TLPSLIKLDLSSNLLSSFPVTGLHGLTHLKLTGNRALQSLIPSA-NFPELKIIEM 473
Score = 131 (51.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 67/244 (27%), Positives = 103/244 (42%)
Query: 31 LQEANLDVIPSHS--N-PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIG 86
LQ L +P + N S+Q L L N I V S SL+H+ L +P+
Sbjct: 121 LQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQ 180
Query: 87 GFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F L + L NK H +S V NRI + + CF+GL +L L
Sbjct: 181 AFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLD 240
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L+ N L PT + L L EL N ++ + AF G L + + + +
Sbjct: 241 LNYNNLDEFPT-AIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGIS 299
Query: 206 AFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI-GQNGFSMLEAGCFKGLSYLKR 263
AF+ L LR+L L +++ P L+ LE L + G S+ + C + L L+
Sbjct: 300 AFQHLPELRTLTLNGASQITEFP--DLTGTATLESLTLTGAKISSLPQTVCDQ-LPNLQV 356
Query: 264 LEIT 267
L+++
Sbjct: 357 LDLS 360
>FB|FBgn0259677 [details] [associations]
symbol:CG42346 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082
RefSeq:NP_001036306.2 UniGene:Dm.23593 ProteinModelPortal:Q0KHN6
SMR:Q0KHN6 GeneID:3355160 KEGG:dme:Dmel_CG42346 FlyBase:FBgn0259677
InParanoid:Q0KHN6 OMA:RHFSIPN OrthoDB:EOG40ZPCD PhylomeDB:Q0KHN6
GenomeRNAi:3355160 NextBio:850922 Bgee:Q0KHN6 Uniprot:Q0KHN6
Length = 1639
Score = 234 (87.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 128/523 (24%), Positives = 211/523 (40%)
Query: 47 IQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN--K 103
++ L L+ N I+ ++ A +L+ +DLSH + + F + L L L + +
Sbjct: 643 LEELSLARNHIEAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLR 702
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
Q S+ + + + +N+++ D + + LR L L N + I G
Sbjct: 703 KLEQHAFKSLTNLNELNL-ERNQLNPADIQTLD-IPNLRRLLLSHNNFSYAGSVG-IMAG 759
Query: 164 MLAELRV--GLNVFTT----LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLV 217
ML LR L++ + D F L LDL LT I+ N F GL+ + L
Sbjct: 760 MLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNLVRLDLCDNRLTQINRNIFSGLNVFKELR 819
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 277
L N L P L L+ LE L++ +N + ++ G L++L I + +T +
Sbjct: 820 LCRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQL-ILRDNKITAL-S 877
Query: 278 GAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA---WPEL 334
G A + L NL ++L N F S L+ P L
Sbjct: 878 GFNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRL 937
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAP-LKYKSLISLSA-EDLGCAGAG 392
+++ NPI I ++E C + L K + A + L
Sbjct: 938 SWLNLTGNPIN---RIYTVKEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLVNNR 994
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
+T IS AF+ L+ L +L L+ N L+ +P ++L L L L I N LE L
Sbjct: 995 ITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFSVDLL 1054
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
++ L+++ + L R+ K F + ++ DA L L+ L+L++
Sbjct: 1055 E-MQTLDLS-FNQLDRISKKTFRNLHGLLELFLMGNRMT-VLSNDAFRFLRKLHVLDLRK 1111
Query: 513 NAFTSFSESMLAWPE--LRTIDIAENPIECGCNIL----WLRE 549
N F L E LRT+ + ENP+ C C+ WLR+
Sbjct: 1112 NYFELVPLEPLRPLETNLRTLRLEENPLHCSCDAQKLWEWLRD 1154
Score = 220 (82.5 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 101/427 (23%), Positives = 170/427 (39%)
Query: 45 PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P ++ L N+I+ V A L +D+SH + + FE ++L + L+HN
Sbjct: 306 PQLKTLSFYANQIELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHN- 364
Query: 104 HFPQQIVCSIIS--PRRVEIF-GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
H + + S P+ E+F +N I + F T + ++YL+ N + + F
Sbjct: 365 HI--HTIGGVFSNLPQLREVFLSENNILELPADAFTNSTNVDVIYLESNAIAHIDPNVFS 422
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
L L L + N L F+ +L++L L + ++ FR L LR + L +
Sbjct: 423 TLVNLDHLYLRSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHN 482
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
NR++ + L L+EL I +N +E F L ++ + + + LT V + F
Sbjct: 483 NRIRRVRRGVFEPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQD-NQLT-VLEDIF 540
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDI 339
D + + + LK+N T S A P+L + +
Sbjct: 541 PDENSSLLSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYL 600
Query: 340 AENPI-----ECGCNILWLREMLVRRNTSAVFCNSP-APLKYKSLISLSAEDLGCAGAGL 393
++N I + N+L L+ + + N APL+ E+L A +
Sbjct: 601 SDNKIRDIEKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQ-------DLEELSLARNHI 653
Query: 394 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 453
I AF L L+SL L+ N L + S L L +G LE FK L+
Sbjct: 654 EAIEGYAFAKLKNLKSLDLSHNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLT 713
Query: 454 YLKRLEI 460
L L +
Sbjct: 714 NLNELNL 720
Score = 182 (69.1 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 118/526 (22%), Positives = 210/526 (39%)
Query: 65 PIY-LSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRR-VEIF 122
PI+ LS+ D S T+ L + F+P + LQ +H+ H S+ + R +E
Sbjct: 97 PIHSLSIYDFDRSVTS-LSQDV--FQPGVHIRHLQFSHS-HLEALKDNSLRNVRSSLESL 152
Query: 123 G--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 180
+++++ + L L D N++ V SF L +++L + N + +
Sbjct: 153 SIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYGL-RISKLNMKGNRLQGMPE 211
Query: 181 GAFNGLGR-LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 239
AF GL + +D+ GL A R L LR L L++NR IPT +
Sbjct: 212 HAFAGLEECMQEIDVSENGLRTFPLMALRKLDHLRILRLSNNR---IPTFY-------GD 261
Query: 240 LEIGQNGFSMLEA--GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 297
+++ N S A G F+ L L L+++ ++ + F
Sbjct: 262 IQLATNNASAAAAAVGAFQ-LPSLIFLDLS-SNQFAEIGPDCFR-AFPQLKTLSFYANQI 318
Query: 298 XXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIEC-G---CNILW 352
++ A L L L++ N + + L+T+D++ N I G N+
Sbjct: 319 ELVQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTIGGVFSNLPQ 378
Query: 353 LREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVL 412
LRE+ + N PA + + S + + + + +I N F L L L L
Sbjct: 379 LREVFLSENN---ILELPADA-FTN--STNVDVIYLESNAIAHIDPNVFSTLVNLDHLYL 432
Query: 413 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 472
N + +P K T+L L + N LE G F+ L +L+ + + + + RVR+G
Sbjct: 433 RSNFIPLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHN-NRIRRVRRG 491
Query: 473 AFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPE----L 528
F I E A L N+ H+NL++N T + +P+ L
Sbjct: 492 VFEPLPSLQELHIQKNSIEDI-EPQAFHTLENMQHINLQDNQLTVLED---IFPDENSSL 547
Query: 529 RTIDIAENPI----------ECGCNILWLREMLVRRNTSAVFCNSP 564
++ + N + + I+WL++ + R + F ++P
Sbjct: 548 LSVQLEANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTP 593
Score = 178 (67.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 118/539 (21%), Positives = 206/539 (38%)
Query: 26 DPSCNLQEANL------DVIPS--HSNPSIQRLVLSTNRIKTVDSAIPIY-LSLQHVDLS 76
+P +LQE ++ D+ P H+ ++Q + L N++ ++ P SL V L
Sbjct: 494 EPLPSLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSSLLSVQLE 553
Query: 77 HTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF-GQNRISRIDQACF 135
+ F Q+K+ + L N+ + +P+ ++ N+I I++ F
Sbjct: 554 ANYLHKVHPRTFSRQQKVQIMWLKDNQLTRVERSFFADTPQLGRLYLSDNKIRDIEKDTF 613
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
L L+ L L NQLR + F L L EL + N + AF L L +LDL
Sbjct: 614 VNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIEAIEGYAFAKLKNLKSLDLS 673
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
L ++ + F L SL L + L+ + LT L EL + +N + +
Sbjct: 674 HNPLVQLTRDIFSNEFPLNSLNLGNCSLRKLEQHAFKSLTNLNELNLERNQLNPADIQTL 733
Query: 256 KGLSYLKRLEITGASNLTRVRK-GAFA---DXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
+ L+RL + +N + G A D I + NL
Sbjct: 734 D-IPNLRRL-LLSHNNFSYAGSVGIMAGMLDRLRSLQQLSMSNCSLGQIPDLLFAKNTNL 791
Query: 312 YHLNLKENAFTSFSESMLA----WPELRTI--DIAENPIECGCNILWLREMLVRRN--TS 363
L+L +N T + ++ + + ELR ++++ P N+ L + + RN S
Sbjct: 792 VRLDLCDNRLTQINRNIFSGLNVFKELRLCRNELSDFPHIALYNLSTLESLDLARNQLAS 851
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
F L + LI + +G N++ L S+ L+ N L S+P
Sbjct: 852 IDFFKLSGTLNLRQLILRDNKITALSGFNAVNLTQ--------LDSVDLSGNLLLSLPAN 903
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSY--LKRLEITGASNLTRVRKGAFADXXXXX 481
L L+++ + N F + + +S L L +TG + + R+ +
Sbjct: 904 FLRHSINLQKVHLSNNRFLQIPSSALSDVSIPRLSWLNLTG-NPINRIYT-VKEERYPYL 961
Query: 482 XXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIE 539
I+ L HL+L N T S + L T+D++ N +E
Sbjct: 962 KELYICQTNLSILTSKDFEAFQALQHLHLVNNRITRISPGAFKSLTNLLTLDLSVNELE 1020
Score = 167 (63.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 82/343 (23%), Positives = 150/343 (43%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGG 87
C + ++ I ++ +++ L L+ N++ ++D + L+L+ + L I + G
Sbjct: 821 CRNELSDFPHIALYNLSTLESLDLARNQLASIDFFKLSGTLNLRQLILRDNK--ITALSG 878
Query: 88 FEP----QEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
F Q V+L N P + I+ ++V + NR +I + ++ R+
Sbjct: 879 FNAVNLTQLDSVDLSGNLLLSLPANFLRHSINLQKVHL-SNNRFLQIPSSALSDVSIPRL 937
Query: 144 LYLD-----DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198
+L+ N++ +V + YL L + L++ T+ AF L L ++ R
Sbjct: 938 SWLNLTGNPINRIYTVKEERYPYLKELYICQTNLSILTSKDFEAFQALQHLHLVNNR--- 994
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
+T IS AF+ L+ L +L L+ N L+ +P ++L L L L I N LE L
Sbjct: 995 ITRISPGAFKSLTNLLTLDLSVNELEMLPKERLQGLRLLRFLNISHNTLKDLEEFSVDLL 1054
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
++ L+++ + L R+ K F + + A L L+ L+L++
Sbjct: 1055 E-MQTLDLS-FNQLDRISKKTFRNLHGLLELFLMGNRMTV-LSNDAFRFLRKLHVLDLRK 1111
Query: 319 NAFTSFSESMLAWPE--LRTIDIAENPIECGCNIL----WLRE 355
N F L E LRT+ + ENP+ C C+ WLR+
Sbjct: 1112 NYFELVPLEPLRPLETNLRTLRLEENPLHCSCDAQKLWEWLRD 1154
Score = 155 (59.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 112/530 (21%), Positives = 195/530 (36%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP 84
S ++ L +PS + S+Q+L N I VD L + +++ +P
Sbjct: 151 SLSIVNGKLTQMPSRALSSMQKLTALDFDYNEIVRVDDYSFYGLRISKLNMKGNRLQGMP 210
Query: 85 IGGFEPQEKLV-ELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTAL 141
F E+ + E+ ++ N + FP + + R + + NRI F G
Sbjct: 211 EHAFAGLEECMQEIDVSENGLRTFPLMALRKLDHLRILRL-SNNRIPT-----FYG---- 260
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
I +N + L L L + N F + F +L L +
Sbjct: 261 DIQLATNNASAAAAAVGAFQLPSLIFLDLSSNQFAEIGPDCFRAFPQLKTLSFYANQIEL 320
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
+ AF+ L L SL ++ NR+ + K K RL+ +++ N + G F L L
Sbjct: 321 VQPEAFKSLRELMSLDMSHNRIIGLDPKVFEKNKRLQTVDLSHNHIHTI-GGVFSNLPQL 379
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
+ + ++ +N+ + AF + I+ L NL HL L+ N
Sbjct: 380 REVFLS-ENNILELPADAFTNSTNVDVIYLESNAIAH-IDPNVFSTLVNLDHLYLRSNFI 437
Query: 322 TSFSESML-AWPELRTIDIAENPI---ECGC--NILWLREML-----VRRNTSAVFCNSP 370
++ +L ++ + N I E G + LRE+ +RR VF P
Sbjct: 438 PLLPVTLFDKSTKLTSLSLDNNEIQDLEIGMFRKLEHLREVRLHNNRIRRVRRGVF--EP 495
Query: 371 APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 430
P S ++L + +I AF L ++ + L DN+L + + +
Sbjct: 496 LP---------SLQELHIQKNSIEDIEPQAFHTLENMQHINLQDNQLTVLEDIFPDENSS 546
Query: 431 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX 490
L +++ N + F ++ + + + LTRV + FAD
Sbjct: 547 LLSVQLEANYLHKVHPRTFSRQQKVQIMWLKD-NQLTRVERSFFADTPQLGRLYLSDNKI 605
Query: 491 XXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
I E+D V L L L+L N A +L + +A N IE
Sbjct: 606 RDI-EKDTFVNLLLLQFLDLSGNQLRQLRRDYFAPLQDLEELSLARNHIE 654
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 228 (85.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 72/188 (38%), Positives = 98/188 (52%)
Query: 99 LNHNKHFPQQI-VCSIISPRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVP 155
LN ++ Q I V S R +EI +N I I+ F GL L L L DN+L ++P
Sbjct: 82 LNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIP 141
Query: 156 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLR 214
+F YL L EL + N ++ AFN + L LDL L+ IS+ AF GLS LR
Sbjct: 142 NGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLR 201
Query: 215 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
L L L+ IP L L RL+ELE+ N S++ G FKGL +L++L + A T
Sbjct: 202 YLNLGMCNLKEIPN--LIPLVRLDELEMSGNQLSIIRPGSFKGLVHLQKLWMMHAQIQT- 258
Query: 275 VRKGAFAD 282
+ + AF D
Sbjct: 259 IERNAFDD 266
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 74/233 (31%), Positives = 105/233 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NLQE + VI S ++ L LS N I+ ++ A +L ++
Sbjct: 72 PDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLE 131
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G FE KL EL L +N + P + S RR+++ R+S I +
Sbjct: 132 LFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISE 191
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
FEGL+ LR L L L+ +P + I L L EL + N + + G+F GL L L
Sbjct: 192 GAFEGLSNLRYLNLGMCNLKEIP--NLIPLVRLDELEMSGNQLSIIRPGSFKGLVHLQKL 249
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ A + I NAF L L L L N L +P + L LE + + N
Sbjct: 250 WMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHHN 302
Score = 207 (77.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 78/272 (28%), Positives = 113/272 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 86 ENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAF 145
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL I L+ L L +
Sbjct: 146 EYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 205
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ E L L LE++G + L+ +R G+F IE
Sbjct: 206 GM--CNLKEIPNLIPLVRLDELEMSG-NQLSIIRPGSFKGLVHLQKLWMMHAQIQT-IER 261
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L LNL N T + P L + + NP C C+ILWL +EM
Sbjct: 262 NAFDDLQSLVELNLAHNNLTLLPHDLFT-PLHHLERVHLHHNPWNCNCDILWLSWWLKEM 320
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
+ + C+SP K + + L C
Sbjct: 321 VPANTSCCARCSSPTSHKGRYIGELDQNYFHC 352
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 49/142 (34%), Positives = 78/142 (54%)
Query: 136 EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ T R L L +N ++ + SF +L L L++ N + GAFNGL L+ L+L
Sbjct: 73 DGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLEL 132
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAG 253
LT I + AF LS L+ L L +N ++SIP+ +++ L L++G+ S + G
Sbjct: 133 FDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEG 192
Query: 254 CFKGLSYLKRLEITGASNLTRV 275
F+GLS L+ L + G NL +
Sbjct: 193 AFEGLSNLRYLNL-GMCNLKEI 213
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 70/269 (26%), Positives = 107/269 (39%)
Query: 310 NLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNI-LWLREMLVRRNTSAVFC 367
N +LNL+EN +S L + +++N I NI + L NT +F
Sbjct: 78 NTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIR---NIEIGAFNGLANLNTLELFD 134
Query: 368 NSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQL 425
N + + LS ++L + +I AF + LR L L + RL I
Sbjct: 135 NRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEGAF 194
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
L+ L L +G ++ E L L LE++G + L+ +R G+F
Sbjct: 195 EGLSNLRYLNLGM--CNLKEIPNLIPLVRLDELEMSG-NQLSIIRPGSFKGLVHLQKLWM 251
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCN 543
I E +A L +L LNL N T + P L + + NP C C+
Sbjct: 252 MHAQIQTI-ERNAFDDLQSLVELNLAHNNLTLLPHDLFT-PLHHLERVHLHHNPWNCNCD 309
Query: 544 ILWL----REMLVRRNTSAVFCNSPAPLK 568
ILWL +EM+ + C+SP K
Sbjct: 310 ILWLSWWLKEMVPANTSCCARCSSPTSHK 338
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 59/249 (23%), Positives = 108/249 (43%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
++ T L+ +P +S TR L + +N +++ FK L +L+ L+++ +++ +
Sbjct: 61 VICTRRGLRDVPDG-ISTNTRY--LNLQENLIQVIKVDSFKHLRHLEILQLS-KNHIRNI 116
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA L L L L+ N S S + P L
Sbjct: 117 EIGAF-NGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSL 175
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCN-SPAPLK-YKSLISL-SAEDLGCAGA 391
R +D+ E + ++ E ++ + N LK +LI L ++L +G
Sbjct: 176 RRLDLGELK-----RLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGN 230
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
L+ I +F+GL L+ L + ++Q+I L L EL + N ++L F
Sbjct: 231 QLSIIRPGSFKGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTP 290
Query: 452 LSYLKRLEI 460
L +L+R+ +
Sbjct: 291 LHHLERVHL 299
>MGI|MGI:1341817 [details] [associations]
symbol:Lgr5 "leucine rich repeat containing G protein
coupled receptor 5" species:10090 "Mus musculus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1341817
GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0048839 GO:GO:0016500 EMBL:CH466539
GeneTree:ENSGT00650000092962 HOVERGEN:HBG031675
HOGENOM:HOG000231829 CTD:8549 KO:K04308 OMA:FNPHFKE
OrthoDB:EOG46143B EMBL:AF110818 EMBL:AK132387 IPI:IPI00130319
PIR:JG0193 RefSeq:NP_034325.2 UniGene:Mm.42103
ProteinModelPortal:Q9Z1P4 SMR:Q9Z1P4 STRING:Q9Z1P4
PhosphoSite:Q9Z1P4 PRIDE:Q9Z1P4 DNASU:14160
Ensembl:ENSMUST00000020350 GeneID:14160 KEGG:mmu:14160
UCSC:uc007hbi.1 InParanoid:Q3V1L2 NextBio:285290 Bgee:Q9Z1P4
Genevestigator:Q9Z1P4 GermOnline:ENSMUSG00000020140 Uniprot:Q9Z1P4
Length = 907
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 98/381 (25%), Positives = 156/381 (40%)
Query: 95 VELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSV 154
++L +N+ P ++ + + + G N ++ I + F GL +L++L L +NQLR V
Sbjct: 71 LDLSMNNISQLPASLLHRLCFLEELRLAG-NALTHIPKGAFTGLHSLKVLMLQNNQLRQV 129
Query: 155 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLR 214
P + L L LR+ N + + F+GL L L L LT++ AFR LS L+
Sbjct: 130 PEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQ 189
Query: 215 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
++ L N++ I L+ L L + N L CF GL L+ L++ +NL
Sbjct: 190 AMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLN-YNNLDE 248
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PE 333
I E A VG P+L ++ +N S PE
Sbjct: 249 FPTAI--KTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPE 306
Query: 334 LRTID------IAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLG 387
LRT+ I E P G L E L T A + P + L +L DL
Sbjct: 307 LRTLTLNGASHITEFPHLTGTATL---ESLTL--TGAKISSLPQAV-CDQLPNLQVLDLS 360
Query: 388 CAGAGLTNISDN--AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 445
N+ ++ + G L+ + L N + I +L L L + N +++
Sbjct: 361 Y------NLLEDLPSLSGCQKLQKIDLRHNEIYEIKGSTFQQLFNLRSLNLAWNKIAIIH 414
Query: 446 AGCFKGLSYLKRLEITGASNL 466
F L L +L+++ SNL
Sbjct: 415 PNAFSTLPSLIKLDLS--SNL 433
Score = 192 (72.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 97/414 (23%), Positives = 165/414 (39%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N IS++ + L L L L N L +P +F L L L + N + + A
Sbjct: 76 NNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQVPEEALQ 135
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L +L L ++ + + F GL LR L L DN L +P + L+ L+ + +
Sbjct: 136 NLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLAL 195
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + F LS L L + + + + K F D A
Sbjct: 196 NKIHHIADYAFGNLSSLVVLHLHN-NRIHSLGKKCF-DGLHSLETLDLNYNNLDEFPT-A 252
Query: 305 LVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRNT 362
+ L NL L N S E + + P L TI +NPI+ G + + L T
Sbjct: 253 IKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAF---QHLPELRT 309
Query: 363 SAVFCNSPAPL-KYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
+ N + + ++ L + E L GA ++++ L L+ L L+ N L+ +
Sbjct: 310 LTL--NGASHITEFPHLTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLLEDL 367
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 480
P+ LS +L+++++ N ++ F+ L L+ L + + + + AF+
Sbjct: 368 PS--LSGCQKLQKIDLRHNEIYEIKGSTFQQLFNLRSLNLAW-NKIAIIHPNAFS----T 420
Query: 481 XXXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN-AFTSFSESMLAWPELRTIDI 533
++ + GL L HL L N A S S +PEL+ I++
Sbjct: 421 LPSLIKLDLSSNLLSSFPVTGLHGLTHLKLTGNRALQSLIPSA-NFPELKIIEM 473
Score = 190 (71.9 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 88/380 (23%), Positives = 148/380 (38%)
Query: 145 YLD--DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
YLD N + +P L L ELR+ N T + GAF GL L L L+ L +
Sbjct: 70 YLDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGLHSLKVLMLQNNQLRQV 129
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ A + L L+SL L N + +P S L L L + N + + F+ LS L+
Sbjct: 130 PEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQAFRSLSALQ 189
Query: 263 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFT 322
+ + + + + AF + + + GL +L L+L N
Sbjct: 190 AMTLA-LNKIHHIADYAFGNLSSLVVLHLHNNRIHS-LGKKCFDGLHSLETLDLNYNNLD 247
Query: 323 SFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV---FCNSPAPLKYKSLI 379
F ++ L+ + N NI + E N S + F ++P S
Sbjct: 248 EFPTAIKTLSNLKELGFHSN------NIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAF 301
Query: 380 SLSAEDLGCAGAGLTNISDNA-FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 438
E G ++I++ G + L SL LT ++ S+P +L L+ L++
Sbjct: 302 QHLPELRTLTLNGASHITEFPHLTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSY 361
Query: 439 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDA 498
N L + G L+++++ + + + KG+ II +A
Sbjct: 362 NLLEDLPS--LSGCQKLQKIDLRH-NEIYEI-KGSTFQQLFNLRSLNLAWNKIAIIHPNA 417
Query: 499 LVGLPNLYHLNLKENAFTSF 518
LP+L L+L N +SF
Sbjct: 418 FSTLPSLIKLDLSSNLLSSF 437
Score = 161 (61.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 87/318 (27%), Positives = 135/318 (42%)
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSA-----------LDLRGAGLTNISDNAFRGL 210
LG L+EL L+VFT+ D + N + +L A L L G LT+I AF GL
Sbjct: 55 LG-LSELPSNLSVFTSYLDLSMNNISQLPASLLHRLCFLEELRLAGNALTHIPKGAFTGL 113
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
L+ L+L +N+L+ +P + L L L+ L + N S + CF GL L+ L + +
Sbjct: 114 HSLKVLMLQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNA 173
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML- 329
LT V AF I + A L +L L+L N S +
Sbjct: 174 -LTDVPVQAFRSLSALQAMTLALNKIHH-IADYAFGNLSSLVVLHLHNNRIHSLGKKCFD 231
Query: 330 AWPELRTIDIAENPIE---CGCNILW-LREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385
L T+D+ N ++ L L+E+ N A + SLI++ D
Sbjct: 232 GLHSLETLDLNYNNLDEFPTAIKTLSNLKELGFHSNNIRSIPER-AFVGNPSLITIHFYD 290
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI-GQNGFSM 443
G++ AF+ L LR+L L + + P L+ LE L + G S+
Sbjct: 291 NPIQFVGVS-----AFQHLPELRTLTLNGASHITEFP--HLTGTATLESLTLTGAKISSL 343
Query: 444 LEAGCFKGLSYLKRLEIT 461
+A C + L L+ L+++
Sbjct: 344 PQAVCDQ-LPNLQVLDLS 360
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 85/360 (23%), Positives = 139/360 (38%)
Query: 187 GR-LSALDLRGAGLTNISDNAFRGLSGLRS-LVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GR L +D GL+ + N LS S L L+ N + +P L +L LEEL +
Sbjct: 44 GRMLLRVDCSDLGLSELPSN----LSVFTSYLDLSMNNISQLPASLLHRLCFLEELRLAG 99
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + + G F GL LK L + + L +V + A + +
Sbjct: 100 NALTHIPKGAFTGLHSLKVLMLQN-NQLRQVPEEALQNLRSLQSLRLDANHISY-VPPSC 157
Query: 305 LVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILW--LREMLVRR- 360
GL +L HL L +NA T ++ + L+ + +A N I + + L ++V
Sbjct: 158 FSGLHSLRHLWLDDNALTDVPVQAFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHL 217
Query: 361 NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISD--NAFRGLSGLRSLVLTDNRLQ 418
+ + + +S + L SL DL N+ + A + LS L+ L N ++
Sbjct: 218 HNNRI--HSLGKKCFDGLHSLETLDLN-----YNNLDEFPTAIKTLSNLKELGFHSNNIR 270
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
SIP + L + N + F+ L L+ L + GAS++T
Sbjct: 271 SIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHLPELRTLTLNGASHITEF---PHLTGT 327
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 538
+ + LPNL L+L N S+ +L+ ID+ N I
Sbjct: 328 ATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYNLLEDLP-SLSGCQKLQKIDLRHNEI 386
Score = 143 (55.4 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 72/299 (24%), Positives = 126/299 (42%)
Query: 46 SIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
++Q + L+ N+I + D A SL + L + + F+ L L LN+N
Sbjct: 187 ALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
FP I +S + F N I I + F G +L ++ DN ++ V +F +L
Sbjct: 247 DEFPTAI--KTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVSAFQHL 304
Query: 163 GMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L + G + T G L +L L GA ++++ L L+ L L+ N
Sbjct: 305 PELRTLTLNGASHITEFPH--LTGTATLESLTLTGAKISSLPQAVCDQLPNLQVLDLSYN 362
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L+ +P+ LS +L+++++ N ++ F+ L L+ L + + + + AF+
Sbjct: 363 LLEDLPS--LSGCQKLQKIDLRHNEIYEIKGSTFQQLFNLRSLNLAW-NKIAIIHPNAFS 419
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN-AFTSFSESMLAWPELRTIDI 339
+ + GL L HL L N A S S +PEL+ I++
Sbjct: 420 ----TLPSLIKLDLSSNLLSSFPVTGLHGLTHLKLTGNRALQSLIPSA-NFPELKIIEM 473
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 68/244 (27%), Positives = 103/244 (42%)
Query: 31 LQEANLDVIPSHS--N-PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIG 86
LQ L +P + N S+Q L L N I V S SL+H+ L +P+
Sbjct: 121 LQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQ 180
Query: 87 GFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F L + L NK H +S V NRI + + CF+GL +L L
Sbjct: 181 AFRSLSALQAMTLALNKIHHIADYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLD 240
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L+ N L PT + L L EL N ++ + AF G L + + + +
Sbjct: 241 LNYNNLDEFPT-AIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGVS 299
Query: 206 AFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI-GQNGFSMLEAGCFKGLSYLKR 263
AF+ L LR+L L + + P L+ LE L + G S+ +A C + L L+
Sbjct: 300 AFQHLPELRTLTLNGASHITEFP--HLTGTATLESLTLTGAKISSLPQAVCDQ-LPNLQV 356
Query: 264 LEIT 267
L+++
Sbjct: 357 LDLS 360
>FB|FBgn0261269 [details] [associations]
symbol:conv "convoluted" species:7227 "Drosophila
melanogaster" [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0035159 "regulation of tube length, open tracheal
system" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE013599 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008045
GeneTree:ENSGT00690000101816 GO:GO:0035159 InterPro:IPR026906
Pfam:PF13306 EMBL:EU814872 RefSeq:NP_610948.2 UniGene:Dm.23922
SMR:A1Z9N6 STRING:A1Z9N6 EnsemblMetazoa:FBtr0087540 GeneID:36588
KEGG:dme:Dmel_CG8561 UCSC:CG8561-RA CTD:36588 FlyBase:FBgn0261269
InParanoid:A1Z9N6 OMA:TIVCENT OrthoDB:EOG4ZGMT6 GenomeRNAi:36588
NextBio:799366 Uniprot:A1Z9N6
Length = 1092
Score = 231 (86.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 132/562 (23%), Positives = 234/562 (41%)
Query: 46 SIQRLVLSTNRI-----KTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQL 99
+I L LS NR+ ++ D + Y L + +L++ IPI K++
Sbjct: 390 NITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQ--IPIQNMTGL-KVLNASY 446
Query: 100 NHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 159
N P+ + +++ N IS I F+ L +LR + L N +R + + +F
Sbjct: 447 NSITEIPKNCFPKLYELHTIDV-SHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTF 505
Query: 160 IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
L L E+ + N ++ G+ L L L L N + F+ L L +
Sbjct: 506 GTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLYLNN----NQLEKLFQLPISLNELYFS 561
Query: 220 DNRLQSIPTKQLSKLTRLEELEIGQNGFS-MLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
NRL +IP+ + L L++ N L F GL ++RL++ + +++ K
Sbjct: 562 HNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQN-NGISQPPKD 620
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTI 337
A A +E A LP L+ LNL N S+ +L T+
Sbjct: 621 AVA-VMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLTL 679
Query: 338 DIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKS--LIS--LSAEDLGCAGAGL 393
+++ N I+ N +++ + RN F NS L K+ ++ LS E L + +
Sbjct: 680 NLSSNGIQTLQNDIFVG-LPSLRNLDLSF-NSLTKLDNKTNGVLDDLLSLETLDLSHNRI 737
Query: 394 TNISDNAFRGLS----GLRSLVLTDNRLQSIPTKQLSKLTR-LEELEIGQNGFSMLEAGC 448
+ ++ F LR+L L+ N L I T ++ T+ L L++ N + L G
Sbjct: 738 SFVTKKTFPSHQYIPYNLRNLNLSYN-LMPILTYDITFGTKKLVRLDVSHNQINDLRRGV 796
Query: 449 FKGLSYLKRLEIT--GASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
+ L+ L+++ SNL + + F D + LV + +L
Sbjct: 797 ISNFTSLQSLDMSYNELSNL-KSEEHIF-DLPQNLSWLDLSHNKIYHLPFANLVKVKSLK 854
Query: 507 HLNLKENAFTSFSESMLAWPELRT---IDIAENPIECGCNI-----LWLREMLVRRNTSA 558
+++L N+ S++ +R + +A NP+ CGCN L++ + + +
Sbjct: 855 YVDLTNNSLEDVPASIVG--SMRNGSQVLLAGNPLHCGCNARPLKYFMLQQTIAGEDLKS 912
Query: 559 VFCNSPAPLKYKSLISLSAEDL 580
++C +PA +K K LISL E L
Sbjct: 913 IYCGTPALIKDKQLISLDDEYL 934
Score = 215 (80.7 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 80/351 (22%), Positives = 154/351 (43%)
Query: 117 RRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 176
+ +++ G N++ + + F+ L L +L + NQ++ + L L V N +
Sbjct: 201 KTLDLHG-NQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALS 259
Query: 177 TLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 236
L+ G F L L L + + N+FRG+ LR L L+DN L I + R
Sbjct: 260 ELSRGTFARNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIAR 319
Query: 237 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX 296
+ +++ +N +E F ++Y++ L++ +N+T++ K +F D
Sbjct: 320 IGTIDLARNRLKKIEFQMFTQMNYVELLDLA-ENNITKIEKNSFKDIYQAIINVSHNALE 378
Query: 297 XXXIEEGALVGLPNLYHLNLKENAFTSFS-----ESMLA-WPEL---RTIDIAENPIECG 347
IE A N+ L+L N +FS E+ A + +L ++A+ PI+
Sbjct: 379 L--IETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQ-- 434
Query: 348 CNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGL 407
N+ L+ + N+ + P Y+ L D+ + +++I + F+ L L
Sbjct: 435 -NMTGLKVLNASYNSITEIPKNCFPKLYE----LHTIDV--SHNNISSIFNGVFQTLFSL 487
Query: 408 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
RS+ L+ N ++ I + L L E+++ N + G L+ L++L
Sbjct: 488 RSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQL 538
Score = 197 (74.4 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 91/418 (21%), Positives = 167/418 (39%)
Query: 47 IQRLVLSTNRIKTVD--SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
++ L L+ N I ++ S IY ++ +++SH +I FE + L L+HN+
Sbjct: 344 VELLDLAENNITKIEKNSFKDIYQAI--INVSHNALELIETAAFENCVNITVLDLSHNRL 401
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+F ++ ++ N ++ + Q + +T L++L N + +P F L
Sbjct: 402 ANFSRRSFDETTFATYFQL-SYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKL 460
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L + V N +++ +G F L L ++DL + I + F L L + L+ N
Sbjct: 461 YELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNE 520
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L S+ L+KLT L +L + N L F+ L L + + LT + G +
Sbjct: 521 LVSVVRGSLAKLTSLRQLYLNNNQLEKL----FQLPISLNELYFSH-NRLTNIPSGTWPV 575
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAE 341
+ + GL + L L+ N + + +A L+ + +
Sbjct: 576 MNSLIYLDLSHNQLGDTLNGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLEN 635
Query: 342 NPIEC-GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
N I + +L N + ++ L+ L L + G+ + ++
Sbjct: 636 NNITTLERSAFGKLPVLFELNLYGNQVKDISKRAFEGLLQLLT--LNLSSNGIQTLQNDI 693
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQ---LSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 455
F GL LR+L L+ N L + K L L LE L++ N S + F Y+
Sbjct: 694 FVGLPSLRNLDLSFNSLTKLDNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYI 751
Score = 193 (73.0 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 82/329 (24%), Positives = 144/329 (43%)
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
+ ++G N++ I + FEGL L L L N ++++ F+ L L L + N T L
Sbjct: 655 LNLYG-NQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLSFNSLTKL 713
Query: 179 ---ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLS----GLRSLVLTDNRLQSIPTKQL 231
+G + L L LDL ++ ++ F LR+L L+ N L I T +
Sbjct: 714 DNKTNGVLDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYN-LMPILTYDI 772
Query: 232 SKLTR-LEELEIGQNGFSMLEAGCFKGLSYLKRLEIT--GASNLTRVRKGAFADXXXXXX 288
+ T+ L L++ N + L G + L+ L+++ SNL + + F D
Sbjct: 773 TFGTKKLVRLDVSHNQINDLRRGVISNFTSLQSLDMSYNELSNL-KSEEHIF-DLPQNLS 830
Query: 289 XXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRT---IDIAENPIE 345
+ LV + +L +++L N+ S++ +R + +A NP+
Sbjct: 831 WLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSLEDVPASIVG--SMRNGSQVLLAGNPLH 888
Query: 346 CGCNI-----LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
CGCN L++ + + +++C +PA +K K LISL E L CA
Sbjct: 889 CGCNARPLKYFMLQQTIAGEDLKSIYCGTPALIKDKQLISLDDEYLHCA-----EDEQEM 943
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
++G+ + LTD R + + T + LT
Sbjct: 944 YKGIDYEQ---LTDVRFREVKTNKAGMLT 969
Score = 183 (69.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 92/427 (21%), Positives = 171/427 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI---YLGMLAELRVGLNVFTTLAD 180
+ +S + F L + L +D + + +P F L +RV + L
Sbjct: 132 RTNLSHVGLLGFGILGKAKELVIDGHAFQQLPKDLFAGQEIANSLGIIRVTNGNLSDLPI 191
Query: 181 GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
F L +L LDL G L N+ N F+ L L L ++ N+++ + + ++ LT+L
Sbjct: 192 ETFQPLRKLKTLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWC 251
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
+ N S L G F S LK L ++ + + R+ +F I
Sbjct: 252 NVSHNALSELSRGTFARNSVLKVLHLSH-NQIARLDANSFRGMRFLRRLFLSDNVLTD-I 309
Query: 301 EEG-----ALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI-ECGCNILW-L 353
G A +G +L LK+ F F++ + + EL +D+AEN I + N +
Sbjct: 310 GRGTFGSIARIGTIDLARNRLKKIEFQMFTQ--MNYVEL--LDLAENNITKIEKNSFKDI 365
Query: 354 REMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLT 413
+ ++ + +A+ A +++ ++++ DL + L N S +F + L+
Sbjct: 366 YQAIINVSHNALELIETAA--FENCVNITVLDL--SHNRLANFSRRSFDETTFATYFQLS 421
Query: 414 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 473
N L ++ + +T L+ L N + + CF L L ++++ +N++ + G
Sbjct: 422 YNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSH-NNISSIFNGV 480
Query: 474 FADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTID 532
F I + LP L ++L N S LA LR +
Sbjct: 481 FQTLFSLRSIDLSHNSMREI-KSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSLRQLY 539
Query: 533 IAENPIE 539
+ N +E
Sbjct: 540 LNNNQLE 546
Score = 172 (65.6 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 88/425 (20%), Positives = 161/425 (37%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N + I+ A FE + +L L N+L + SF ++ N T LA
Sbjct: 375 NALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQIPIQ 434
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
+ L L+ +T I N F L L ++ ++ N + SI L L +++
Sbjct: 435 NMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSHNNISSIFNGVFQTLFSLRSIDLSH 494
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N +++ F L L ++++ + L V +G+ A +E+
Sbjct: 495 NSMREIKSSTFGTLPTLLEMDLSH-NELVSVVRGSLAKLTSLRQLYLNNNQ----LEK-- 547
Query: 305 LVGLP-NLYHLNLKENAFTSFSESMLAWPELRTI---DIAENPIECGCNILWLREMLVRR 360
L LP +L L N T+ WP + ++ D++ N + N +LV +
Sbjct: 548 LFQLPISLNELYFSHNRLTNIPSG--TWPVMNSLIYLDLSHNQLGDTLNGESFTGLLVVQ 605
Query: 361 NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 420
P K + + + L +T + +AF L L L L N+++ I
Sbjct: 606 RLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLYGNQVKDI 665
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV--RKGAFADXX 478
+ L +L L + NG L+ F GL L+ L+++ ++LT++ + D
Sbjct: 666 SKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNLDLS-FNSLTKLDNKTNGVLDDL 724
Query: 479 XXXXXXXXXXXXXXIIEEDALVG---LP-NLYHLNLKENAFTSFSESM-LAWPELRTIDI 533
+ + +P NL +LNL N + + +L +D+
Sbjct: 725 LSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDV 784
Query: 534 AENPI 538
+ N I
Sbjct: 785 SHNQI 789
Score = 162 (62.1 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 106/513 (20%), Positives = 195/513 (38%)
Query: 40 PSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFE-PQEKLVELQ 98
P P + + +K D+ + Y+ ++ +L+ + + + F P E+L +
Sbjct: 27 PEFKCPKKSKALYPCECVKGSDNGL--YIRCENTNLATLSVALQNLASFGMPIEELT-IY 83
Query: 99 LNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLT-ALRILYLDDNQLRSVPTP 157
H + I + R+ I + ++ I+ F G+ L L+L L V
Sbjct: 84 RGHFVRLYGPLFAHIKA--RMLIIEETPLATIEDYVFYGVNNTLEQLHLLRTNLSHVGLL 141
Query: 158 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD---NAFRGLSGLR 214
F LG EL + + F L F G ++L + N+SD F+ L L+
Sbjct: 142 GFGILGKAKELVIDGHAFQQLPKDLFAGQEIANSLGIIRVTNGNLSDLPIETFQPLRKLK 201
Query: 215 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
+L L N+L+++ Q L LE L+I N LEA L+ L ++ + L+
Sbjct: 202 TLDLHGNQLENLKRNQFKNLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNA-LSE 260
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPE 333
+ +G FA ++ + G+ L L L +N T +
Sbjct: 261 LSRGTFA-RNSVLKVLHLSHNQIARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIAR 319
Query: 334 LRTIDIAENPIE-------CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
+ TID+A N ++ N + L + L N + + NS + Y+++I++S
Sbjct: 320 IGTIDLARNRLKKIEFQMFTQMNYVELLD-LAENNITKIEKNSFKDI-YQAIINVSHN-- 375
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 446
L I AF + L L+ NRL + + + T ++ N + L
Sbjct: 376 -----ALELIETAAFENCVNITVLDLSHNRLANFSRRSFDETTFATYFQLSYNNLTNLAQ 430
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
+ ++ LK L + +++T + K F I L +L
Sbjct: 431 IPIQNMTGLKVLNAS-YNSITEIPKNCFPKLYELHTIDVSHNNISSIFN-GVFQTLFSLR 488
Query: 507 HLNLKENAFTSFSESMLAW-PELRTIDIAENPI 538
++L N+ S P L +D++ N +
Sbjct: 489 SIDLSHNSMREIKSSTFGTLPTLLEMDLSHNEL 521
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 221 (82.9 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 94/414 (22%), Positives = 158/414 (38%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L ++ I AF+ L L L L N LQ +
Sbjct: 61 NNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFL 120
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
+L L++ +N + F+G +K L++ + ++ + GAF
Sbjct: 121 GTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLD-YNQISCIEDGAFR-ALRDLEVLTL 178
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW--------PELRTIDIAENPI 344
+ + +P L L N + + LAW P + P
Sbjct: 179 NNNNITRLSVASFNHMPKLRTFRLHSNNL--YCDCHLAWLSDWLRQRPRVGLYTQCMGPA 236
Query: 345 EC-GCNILWLREM-LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
G N+ +++ V + S + L + + S + C G GLT I N
Sbjct: 237 HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE 296
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
++ +R L N ++ IP S +L +++ N S F+GL L L + G
Sbjct: 297 TITEIR---LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYG 353
Query: 463 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESM 522
+ +T + KG F + + DA L NL L+L +N + ++
Sbjct: 354 -NKITELPKGLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 411
Query: 523 LAWP--ELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSL 572
+ P ++T+ +A+NP C C++ WL + L TS C SP L K +
Sbjct: 412 FS-PLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRI 464
Score = 218 (81.8 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 75/291 (25%), Positives = 124/291 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL G +T I+ F GL LR L L +N++ +I L LE L + +N +L
Sbjct: 56 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLS 115
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F G L RL+++ + + + + AF IE+GA L +L
Sbjct: 116 ELLFLGTPKLYRLDLS-ENQIQAIPRKAFRGAVDIKNLQLDYNQISC-IEDGAFRALRDL 173
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T S S P+LRT + N + C C++ WL + L +R ++ C
Sbjct: 174 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 233
Query: 369 SPAPLKYKSLISLSAEDLGCAG-AGLTNISDNAFRGLSGLR-SLVLTDNR---LQSIPTK 423
PA L+ ++ + + C+G S + + S + D R L IPT
Sbjct: 234 GPAHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTN 293
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+T E+ + QN ++ G F L+R++++ + ++ AF
Sbjct: 294 LPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSN-NQISEAAPDAF 340
Score = 183 (69.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 123/550 (22%), Positives = 211/550 (38%)
Query: 46 SIQRLVLSTNRIKT--VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
S+Q L+L+ N+I VD+ ++ +L + L I G F P + L L N
Sbjct: 369 SLQLLLLNANKINCLRVDAFQDLH-NLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLAQN- 426
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEG--LTALRILYLDDNQLRSVPTPSFIY 161
P +C + N I C L RI + + R +
Sbjct: 427 --P--FICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFI 482
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRL--SALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
G + R L+ AD A R + +D L I D+ + + LR L
Sbjct: 483 PGT-EDYRSKLSG-DCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELR---LN 537
Query: 220 DNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
+N + T KL +L ++ + N + +E G F G S + L +T ++ L VR
Sbjct: 538 NNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLT-SNRLETVRDK 596
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTI 337
F + + GL ++ L+L +N T+ + S L T+
Sbjct: 597 MFKGLESLKTLMLRSNRVSC-VGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTL 655
Query: 338 DIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTN 395
++ NP C C++ WL + L ++ T C P LK + ++ +D C N
Sbjct: 656 NLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDN 715
Query: 396 ISDNAFR---GLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
R + L ++V N+ L+++P K + K + EL + N F+++ K
Sbjct: 716 SCSPLSRCPAECTCLDTVVRCSNKGLKALP-KGIPK--DVTELYLDGNQFTLVP----KE 768
Query: 452 LSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLN 509
LS K L + SN ++ + +F++ I GL +L L+
Sbjct: 769 LSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CIPARTFDGLKSLRLLS 827
Query: 510 LKENAFTSFSESMLAWPELRTID---IAENPIECGCNILWLREMLVR--RNTSAVFCNSP 564
L N + E A+ +L + I NP+ C CN+ WL + + + C P
Sbjct: 828 LHGNDISVVPEG--AFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGP 885
Query: 565 APLKYKSLIS 574
+ K L++
Sbjct: 886 GEMADKLLLT 895
Score = 176 (67.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 58/209 (27%), Positives = 88/209 (42%)
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
S V C+ A I + E L G +T I+ F GL LR L L +N++ +I
Sbjct: 33 STVDCHGLALRGVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIER 92
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
L LE L + +N +L F G L RL+++ + + + + AF
Sbjct: 93 GAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLS-ENQIQAIPRKAFRGAVDIKN 151
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECG 541
IE+ A L +L L L N T S S P+LRT + N + C
Sbjct: 152 LQLDYNQIS-CIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 210
Query: 542 CNILWLREMLVRRNTSAVF--CNSPAPLK 568
C++ WL + L +R ++ C PA L+
Sbjct: 211 CHLAWLSDWLRQRPRVGLYTQCMGPAHLR 239
Score = 152 (58.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 46/155 (29%), Positives = 75/155 (48%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+++ G N I+RI + F GL LR+L L +N++ ++ +F L L LR+ N
Sbjct: 55 RLDLNGNN-ITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQL 113
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
L++ F G +L LDL + I AFRG +++L L N++ I L L
Sbjct: 114 LSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDL 173
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
E L + N + L F + L+ + ++NL
Sbjct: 174 EVLTLNNNNITRLSVASFNHMPKLRTFRLH-SNNL 207
Score = 135 (52.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 47/196 (23%), Positives = 83/196 (42%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEA 446
C+ L I D+ + + LR L +N + T KL +L ++ + N + +E
Sbjct: 515 CSNQKLNKIPDHIPQYTAELR---LNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEE 571
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
G F G S + L +T ++ L VR F + D+ GL ++
Sbjct: 572 GAFDGASGVNELLLT-SNRLETVRDKMFKGLESLKTLMLRSNRVS-CVGNDSFTGLSSVR 629
Query: 507 HLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNS 563
L+L +N T+ + S L T+++ NP C C++ WL + L ++ T C
Sbjct: 630 LLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQK 689
Query: 564 PAPLKYKSLISLSAED 579
P LK + ++ +D
Sbjct: 690 PYFLKEIPIQDVAIQD 705
Score = 131 (51.2 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 41/124 (33%), Positives = 55/124 (44%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN I I F LR + L +NQ+ +F L L L + N T L G F
Sbjct: 305 QNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLF 364
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L L + + +AF+ L L L L DN+LQ+I S L ++ L +
Sbjct: 365 EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLA 424
Query: 244 QNGF 247
QN F
Sbjct: 425 QNPF 428
Score = 127 (49.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
+ E+R+ N + GAF+ +L +DL ++ + +AF+GL L SLVL N++
Sbjct: 298 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT 357
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
+P L L+ L + N + L F+ L L L + + L + KG F+
Sbjct: 358 ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD-NKLQTIAKGTFS 413
Score = 122 (48.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 41/163 (25%), Positives = 69/163 (42%)
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
H P CS V+ G+ ++ I E +T +R L+ N ++ +P +F
Sbjct: 268 HCPAACTCS---NNIVDCRGKG-LTEIPTNLPETITEIR---LEQNSIKVIPPGAFSPYK 320
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L + + N + A AF GL L++L L G +T + F GL L+ L+L N++
Sbjct: 321 KLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKI 380
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ L L L + N + G F L ++ L +
Sbjct: 381 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHL 423
Score = 119 (46.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 37/135 (27%), Positives = 67/135 (49%)
Query: 64 IPIYL--SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRV 119
IP L ++ + L + +IP G F P +KL + L++N+ + S +
Sbjct: 290 IPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSL 349
Query: 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
++G N+I+ + + FEGL +L++L L+ N++ + +F L L L + N T+A
Sbjct: 350 VLYG-NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 408
Query: 180 DGAFNGLGRLSALDL 194
G F+ L + L L
Sbjct: 409 KGTFSPLRAIQTLHL 423
Score = 112 (44.5 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 49/206 (23%), Positives = 88/206 (42%)
Query: 1 MLVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTV 60
+LV AG+ C P++ S + + L +P + + +RL L+ N I +
Sbjct: 12 LLVLAGEAAPQPC-----PAQCSCSGSTVDCHGLALRGVPRNIPRNTERLDLNGNNITRI 66
Query: 61 DSAIPIYLSLQHV---DLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSII--- 114
+ L+H+ L I G F+ ++L L+LN N Q++ ++
Sbjct: 67 TKTD--FAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNN---LQLLSELLFLG 121
Query: 115 SPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
+P+ + +N+I I + F G ++ L LD NQ+ + +F L L L + N
Sbjct: 122 TPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNN 181
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGL 199
T L+ +FN + +L L L
Sbjct: 182 NITRLSVASFNHMPKLRTFRLHSNNL 207
Score = 106 (42.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 41/151 (27%), Positives = 69/151 (45%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSL---QHVDLSHTTWLIIPI 85
C+ Q+ N IP H L L+ N ++ A I+ L + ++LS+ I
Sbjct: 515 CSNQKLNK--IPDHIPQYTAELRLNNNEFSVLE-ATGIFKKLPQLRKINLSNNKITDIEE 571
Query: 86 GGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
G F+ + EL L N+ + + + + + NR+S + F GL+++R+L
Sbjct: 572 GAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLL 631
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
L DNQ+ +V SF L L+ L + N F
Sbjct: 632 SLYDNQITTVAPGSFDTLHSLSTLNLLANPF 662
Score = 88 (36.0 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 27/125 (21%), Positives = 54/125 (43%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L+ +P + + + T E L++ N + + F GL +L+ L++ + ++ + +GAF D
Sbjct: 42 LRGVP-RNIPRNT--ERLDLNGNNITRITKTDFAGLRHLRVLQLM-ENKISTIERGAFQD 97
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAE 341
+ E +G P LY L+L EN + +++ + +
Sbjct: 98 LKELERLRLNRNNLQL-LSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDY 156
Query: 342 NPIEC 346
N I C
Sbjct: 157 NQISC 161
Score = 85 (35.0 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 45/192 (23%), Positives = 80/192 (41%)
Query: 213 LRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L ++V N+ L+++P K + K + EL + N F+++ K LS K L + SN
Sbjct: 730 LDTVVRCSNKGLKALP-KGIPK--DVTELYLDGNQFTLVP----KELSNYKHLTLIDLSN 782
Query: 272 --LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML 329
++ + +F++ I GL +L L+L N + E
Sbjct: 783 NRISTLSNQSFSNMTQLLTLILSYNRLRC-IPARTFDGLKSLRLLSLHGNDISVVPEG-- 839
Query: 330 AWPELRTID---IAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAE 384
A+ +L + I NP+ C CN+ WL + + + C P + K L++ ++
Sbjct: 840 AFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSK 899
Query: 385 DLGCAGAGLTNI 396
C G NI
Sbjct: 900 KFTCQGPVDVNI 911
Score = 72 (30.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 54/251 (21%), Positives = 101/251 (40%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
++RL L+ N ++ + + + L +DLS IP F + LQL++N
Sbjct: 101 LERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYN--- 157
Query: 106 PQQIVC----SIISPRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 159
QI C + + R +E+ N I+R+ A F + LR L N L ++
Sbjct: 158 --QISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAW 215
Query: 160 IYLGMLAELRVGLNVFTTLADGAF---NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSL 216
+ + RVGL +T A + + + + +G + + L +
Sbjct: 216 LSDWLRQRPRVGL--YTQCMGPAHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAAC 273
Query: 217 VLTDN----R---LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
++N R L IPT +T E+ + QN ++ G F L+R++++
Sbjct: 274 TCSNNIVDCRGKGLTEIPTNLPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSN- 329
Query: 270 SNLTRVRKGAF 280
+ ++ AF
Sbjct: 330 NQISEAAPDAF 340
>WB|WBGene00006593 [details] [associations]
symbol:tol-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007166 "cell
surface receptor signaling pathway" evidence=TAS] [GO:0009790
"embryo development" evidence=IMP] [GO:0006952 "defense response"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] [GO:0030424 "axon"
evidence=ND] [GO:0005057 "receptor signaling protein activity"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611 Pfam:PF01582
PROSITE:PS50104 PROSITE:PS51450 GO:GO:0009792 GO:GO:0040007
GO:GO:0006952 GO:GO:0002119 GO:GO:0010171 GO:GO:0005622
GO:GO:0005623 GO:GO:0007166 GO:GO:0005057
GeneTree:ENSGT00700000104286 SUPFAM:SSF52200 HSSP:O60603
EMBL:FO080418 RefSeq:NP_001020983.1 ProteinModelPortal:Q9N5Z3
SMR:Q9N5Z3 DIP:DIP-24325N IntAct:Q9N5Z3 MINT:MINT-1108170
EnsemblMetazoa:C07F11.1 GeneID:171635 KEGG:cel:CELE_C07F11.1
UCSC:C07F11.1 CTD:171635 WormBase:C07F11.1 InParanoid:Q9N5Z3
OMA:NPYLVEI NextBio:872085 ArrayExpress:Q9N5Z3 Uniprot:Q9N5Z3
Length = 1221
Score = 176 (67.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 81/354 (22%), Positives = 151/354 (42%)
Query: 46 SIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
++Q L LS+N+++ D +P + ++ LS+ + ++ KL L L+HNK
Sbjct: 355 NLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSLSGL-KLESLDLSHNKL 413
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
P I + ++V++ NRI+++ Q + L + L +NQL+S+ F
Sbjct: 414 TEVPAAIG-KVEQLKKVDL-SHNRIAKVYQYVLNKIKQLHTVDLSNNQLQSIGPYIFSDS 471
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L V N + L AF +L + ++ + ++ D SGLR L ++ N
Sbjct: 472 SELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKIKSL-DEGLTEASGLRRLDVSHNE 530
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK-GLSYLKRLEITGASNLTRVRKGAFA 281
+ + L + LE L N ++L A + LK + ++ + +T +
Sbjct: 531 ILVLKWSALPE--NLEILNADNNDINLLTAASMSPSTANLKSVSLSN-NGITIMNADQIP 587
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRT--ID 338
+ + + AL L LNLK N T + ESM + ++
Sbjct: 588 NSLESLDVSNNRLAK---LGKTALAAKSQLRRLNLKGNLLTVVATESMKVVEAVHPLKVE 644
Query: 339 IAENPIECGCNILWL----REMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
I+ENP+ C C + W+ + ++ +++ C+ + SLS +DL C
Sbjct: 645 ISENPLICDCQMGWMIGGAKPKVLIQDSETASCSHAVDGHQIQIQSLSKKDLLC 698
Score = 107 (42.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 373 LKYKSLIS-LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 431
L+ S I L + L G GL +I AF L L++L L+DN L S+ ++ K +
Sbjct: 775 LRTHSFIGRLRLQRLHINGTGLRSIQPKAFHTLPALKTLDLSDNSLISLSGEEFLKCGEV 834
Query: 432 EELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
+L + N FS L G F+ L LK L +
Sbjct: 835 SQLFLNGNRFSTLSRGIFEKLPNLKYLTL 863
Score = 88 (36.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 63/253 (24%), Positives = 106/253 (41%)
Query: 30 NLQEAN--LDVI-PSH-SNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPI 85
NL+ +N L+++ PS S ++ L LS N++ V +AI L+ VDLSH +
Sbjct: 382 NLRLSNNSLELLEPSSLSGLKLESLDLSHNKLTEVPAAIGKVEQLKKVDLSHNRIAKVYQ 441
Query: 86 GGFEPQEKL--VELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
++L V+L N + I +++ N IS + + F LR
Sbjct: 442 YVLNKIKQLHTVDLSNNQLQSIGPYIFSDSSELHSLDV-SNNEISLLFKDAFARCPKLRK 500
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF-NGLGRLSALDLRGAGLTNI 202
+ + N+++S+ G L L V N L A L L+A D L
Sbjct: 501 ISMKMNKIKSLDEGLTEASG-LRRLDVSHNEILVLKWSALPENLEILNA-DNNDINLLTA 558
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ + + L+S+ L++N + + Q+ LE L++ N + L S L+
Sbjct: 559 ASMS-PSTANLKSVSLSNNGITIMNADQIPN--SLESLDVSNNRLAKLGKTALAAKSQLR 615
Query: 263 RLEITGASNLTRV 275
RL + G NL V
Sbjct: 616 RLNLKG--NLLTV 626
Score = 80 (33.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 30/134 (22%), Positives = 50/134 (37%)
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 469
++L+ L + T RL+ L I G ++ F L LK L+++ S L +
Sbjct: 765 IILSGVTLPQLRTHSFIGRLRLQRLHINGTGLRSIQPKAFHTLPALKTLDLSDNS-LISL 823
Query: 470 RKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELR 529
F + LPNL +L L N+ + +L L
Sbjct: 824 SGEEFLKCGEVSQLFLNGNRFSTL-SRGIFEKLPNLKYLTLHNNSLEDIPQ-VLHSTALS 881
Query: 530 TIDIAENPIECGCN 543
I ++ NP+ C C+
Sbjct: 882 KISLSSNPLRCDCS 895
Score = 66 (28.3 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 25/76 (32%), Positives = 35/76 (46%)
Query: 373 LKYKSLISLSAED-LGCA--------GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
L SLISLS E+ L C G + +S F L L+ L L +N L+ IP
Sbjct: 815 LSDNSLISLSGEEFLKCGEVSQLFLNGNRFSTLSRGIFEKLPNLKYLTLHNNSLEDIP-- 872
Query: 424 QLSKLTRLEELEIGQN 439
Q+ T L ++ + N
Sbjct: 873 QVLHSTALSKISLSSN 888
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 226 (84.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 86/332 (25%), Positives = 145/332 (43%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F +T L+ L L D+ + ++ +F L LR+ N T L + L L L L
Sbjct: 70 FSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFL 129
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
G L ++ N F+ L L+ L L N+L +P + L L+ L++ N + L G
Sbjct: 130 DGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGL 189
Query: 255 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHL 314
F L++L + ++ L + G D I GA L +L L
Sbjct: 190 FGVQVKLQKL-LLHSNRLASLESGLL-DSLRALTELQLHTNHLRSIVPGAFDRLRSLSSL 247
Query: 315 NLKENAFTSFSESM-LAWPELRTIDIAENPIECGCNILW-----LREMLVRRNTSAVFCN 368
L EN ++ L L + ++ENP+E +L+ LRE+ ++ S
Sbjct: 248 TLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLK---STQLRT 304
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
PA +++L L ++ + L+ + ++AFRGL L+ L L+ L S+P L L
Sbjct: 305 LPAAA-FRNLTGLRVLEVSLSPR-LSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGL 362
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
RL + + N L + F+ LS L+ +++
Sbjct: 363 CRLRHVSLRSNRLRALPSALFRNLSSLEEVQL 394
Score = 220 (82.5 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 68/221 (30%), Positives = 110/221 (49%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWL--IIPIGGFEPQEKLVELQLNHNK 103
+Q+L+L +NR+ +++S + L +L + L HT L I+P G F+ L L L+ N+
Sbjct: 196 LQKLLLHSNRLASLESGLLDSLRALTELQL-HTNHLRSIVP-GAFDRLRSLSSLTLSENR 253
Query: 104 -HF-PQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
F P + + + + +N + + + F + LR L L QLR++P +F
Sbjct: 254 LEFLPSALFLHSHNLTFLTL-SENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRN 312
Query: 162 LGMLAELRVGLNV-FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
L L L V L+ + L + AF GLG L L L GL ++ RGL LR + L
Sbjct: 313 LTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRS 372
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
NRL+++P+ L+ LEE+++ N L F+ L L
Sbjct: 373 NRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRL 413
Score = 215 (80.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 95/362 (26%), Positives = 140/362 (38%)
Query: 158 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLV 217
SF + +L L + + + +A G FN +L L L +T++ L L L
Sbjct: 69 SFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLF 128
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 277
L N L+S+ KL L+EL + QN + L A F L LK L+++G +NLT + +
Sbjct: 129 LDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSG-NNLTHLPE 187
Query: 278 GAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTI 337
G F +E G L L L L L N S A+ LR++
Sbjct: 188 GLFG-VQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPG--AFDRLRSL 244
Query: 338 D---IAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISL--SAEDLGCAGAG 392
++EN +E + L+L T +P K L +L
Sbjct: 245 SSLTLSENRLEFLPSALFLHS---HNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQ 301
Query: 393 LTNISDNAFRGLSGLRSL-VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
L + AFR L+GLR L V RL ++P L L+ L + G + L AG +G
Sbjct: 302 LRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRG 361
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLK 511
L L+ + + SN R A + DA LP L + L
Sbjct: 362 LCRLRHVSLR--SNRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGVLLG 419
Query: 512 EN 513
N
Sbjct: 420 HN 421
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 82/341 (24%), Positives = 133/341 (39%)
Query: 121 IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 180
+ + +S I F L+ L L N++ +P+ L +L +L + N +L
Sbjct: 80 LLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQ 139
Query: 181 GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
F L L L L L + + F L L+ L L+ N L +P +L++L
Sbjct: 140 NLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKL 199
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
+ N + LE+G L L L++ ++L + GAF D +
Sbjct: 200 LLHSNRLASLESGLLDSLRALTELQLH-TNHLRSIVPGAF-DRLRSLSSLTLSENRLEFL 257
Query: 301 EEGALVGLPNLYHLNLKENAFTS-----FSE-SMLAWPELRTIDIAENPIECGCNILWLR 354
+ NL L L EN F E L L++ + P N+ LR
Sbjct: 258 PSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLR 317
Query: 355 EMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
+ V + S P ++ L L L + GL ++ RGL LR + L
Sbjct: 318 VLEV--SLSPRLSALPEDA-FRGLGELQV--LALSSTGLASLPAGLLRGLCRLRHVSLRS 372
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 455
NRL+++P+ L+ LEE+++ N L F+ L L
Sbjct: 373 NRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRL 413
Score = 185 (70.2 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 77/322 (23%), Positives = 138/322 (42%)
Query: 31 LQEANLDVI-PSHSNPSIQ--RLVLSTNRIKTVDSAIPIYLSL-QHVDLSHTTWLIIPIG 86
L ++++ I P N I+ L LS N+I + SA+ L L + + L +
Sbjct: 81 LSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQN 140
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F+ L EL LN N+ P + + + + +++ G N ++ + + F L+ L
Sbjct: 141 LFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNN-LTHLPEGLFGVQVKLQKL 199
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L N+L S+ + L L EL++ N ++ GAF+ L LS+L L L +
Sbjct: 200 LLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPS 259
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
F L L L++N L+ +P ++ L EL + L A F+ L+ L+ L
Sbjct: 260 ALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVL 319
Query: 265 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF 324
E++ + L+ + + AF + G L GL L H++L+ N +
Sbjct: 320 EVSLSPRLSALPEDAFRGLGELQVLALSSTGLAS-LPAGLLRGLCRLRHVSLRSNRLRAL 378
Query: 325 SESMLA-WPELRTIDIAENPIE 345
++ L + + N +E
Sbjct: 379 PSALFRNLSSLEEVQLDHNQLE 400
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 56/188 (29%), Positives = 86/188 (45%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRI 127
LQ + LS + I G F KL L+L+ NK H P ++ +++ ++ + G N +
Sbjct: 76 LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDG-NEL 134
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
+DQ F+ L L+ L+L+ NQL +P F +LG L L + N T L +G F
Sbjct: 135 KSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQV 194
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
+L L L L ++ L L L L N L+SI +L L L + +N
Sbjct: 195 KLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRL 254
Query: 248 SMLEAGCF 255
L + F
Sbjct: 255 EFLPSALF 262
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 60/222 (27%), Positives = 98/222 (44%)
Query: 46 SIQRLVLSTNRIKT-VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN-- 102
++ L L TN +++ V A SL + LS +P F L L L+ N
Sbjct: 219 ALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPL 278
Query: 103 KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLD-DNQLRSVPTPSFIY 161
+ P+ + I R + + ++ + A F LT LR+L + +L ++P +F
Sbjct: 279 EELPKVLFGEIGGLRELRL-KSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRG 337
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
LG L L + +L G GL RL + LR L + FR LS L + L N
Sbjct: 338 LGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHN 397
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+L+++P L RL + +G N + + G L++L+R
Sbjct: 398 QLETLPGDAFEALPRLAGVLLGHNPWRC-DCGLGPFLAWLRR 438
Score = 157 (60.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 97/421 (23%), Positives = 161/421 (38%)
Query: 177 TLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 236
TL + +F+ + L L L + ++ I+ F L++L L+ N++ +P+ L L
Sbjct: 64 TLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVL 123
Query: 237 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX 296
LE+L + N L+ F+ L +L+ L + + L + F
Sbjct: 124 LEQLFLDGNELKSLDQNLFQKLVHLQELFLN-QNQLAFLPASLFTHLGNLKLLDLSGNNL 182
Query: 297 XXXIEEGALVGLP-NLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIEC---GC--N 349
+ EG L G+ L L L N S +L + L + + N + G
Sbjct: 183 TH-LPEG-LFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDR 240
Query: 350 ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRS 409
+ L + + N F S L +L L+ + L + F + GLR
Sbjct: 241 LRSLSSLTLSENRLE-FLPSALFLHSHNLTFLTLSE-----NPLEELPKVLFGEIGGLRE 294
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNG-FSMLEAGCFKGLSYLKRLEITGASNLTR 468
L L +L+++P LT L LE+ + S L F+GL L+ L ++ ++ L
Sbjct: 295 LRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALS-STGLAS 353
Query: 469 VRKGAFADXXXXXXXXXXXXXXXXIIEEDALV-GLPNLYHLNLKENAFTSF-SESMLAWP 526
+ G + AL L +L + L N + ++ A P
Sbjct: 354 LPAGLLRGLCRLRHVSLRSNRLRAL--PSALFRNLSSLEEVQLDHNQLETLPGDAFEALP 411
Query: 527 ELRTIDIAENPIECGCNI----LWLREM--LVRRNTSAVFCNSPAPLKYKSLISLSAEDL 580
L + + NP C C + WLR LV R C+ P P + L +L A DL
Sbjct: 412 RLAGVLLGHNPWRCDCGLGPFLAWLRRHAGLVGR-AEPPRCHGPGPHAGRLLWTLQAGDL 470
Query: 581 G 581
G
Sbjct: 471 G 471
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 78/371 (21%), Positives = 147/371 (39%)
Query: 177 TLADGAFNGLG-RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 235
T+A A GL L+ + L G + +N+F ++ L+ L+L+D+ + +I +
Sbjct: 39 TVAGIAALGLPTNLTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPI 98
Query: 236 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXX 295
+L+ L + +N + L + L L++L + G + L + + F
Sbjct: 99 KLKTLRLSRNKITHLPSALLDNLVLLEQLFLDG-NELKSLDQNLF-QKLVHLQELFLNQN 156
Query: 296 XXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAEN---PIECGC--N 349
+ L NL L+L N T E + +L+ + + N +E G +
Sbjct: 157 QLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDS 216
Query: 350 ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRS 409
+ L E+ + N S P + L SLS+ L + L + F L
Sbjct: 217 LRALTELQLHTN----HLRSIVPGAFDRLRSLSS--LTLSENRLEFLPSALFLHSHNLTF 270
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 469
L L++N L+ +P ++ L EL + L A F+ L+ L+ LE++ + L+ +
Sbjct: 271 LTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSPRLSAL 330
Query: 470 RKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPEL 528
+ AF + L GL L H++L+ N + ++ L
Sbjct: 331 PEDAFRGLGELQVLALSSTGLASL-PAGLLRGLCRLRHVSLRSNRLRALPSALFRNLSSL 389
Query: 529 RTIDIAENPIE 539
+ + N +E
Sbjct: 390 EEVQLDHNQLE 400
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 65/169 (38%), Positives = 91/169 (53%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N + +I+ F GL +L L L DN+L +VPT +F YL L EL + N
Sbjct: 112 RHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNP 171
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
++ AFN + L LDL L IS+ AF GL LR L L L+ IP L+
Sbjct: 172 IESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTA 229
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L RLEELE+ N ++ G F+GL+ L++L + A T + + AF D
Sbjct: 230 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT-IERNAFDD 277
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 70/222 (31%), Positives = 103/222 (46%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPI 85
NLQE ++ VI + + ++ L LS N ++ ++ A SL ++L +P
Sbjct: 94 NLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 153
Query: 86 GGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
FE KL EL L +N + P + S RR+++ R+ I +A FEGL LR
Sbjct: 154 QAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRY 213
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L L+ +P + L L EL + N + G+F GL L L L A + I
Sbjct: 214 LNLGMCNLKDIP--NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE 271
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 272 RNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 207 (77.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 76/272 (27%), Positives = 111/272 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F+ L L IL L N +R + +F L L L + N TT+ AF
Sbjct: 97 ENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAF 156
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL+ I L L L +
Sbjct: 157 EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 216
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ + L L+ LE++G + L +R G+F IE
Sbjct: 217 GM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSF-QGLTSLRKLWLMHAQVATIER 272
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L LNL N S + P L + + NP C C++LWL +E
Sbjct: 273 NAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCNCDVLWLSWWLKET 331
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
+ T C++PA LK + + L C
Sbjct: 332 VPSNTTCCARCHAPAGLKGRYIGELDQSHFTC 363
Score = 169 (64.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + T +F +L L L++ N+ + GAFNGL L+ L+L LT
Sbjct: 91 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 150
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
+ AF LS LR L L +N ++SIP+ +++ L L++G+ + F+GL
Sbjct: 151 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVN 210
Query: 261 LKRLEITGASNL 272
L+ L + G NL
Sbjct: 211 LRYLNL-GMCNL 221
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 68/271 (25%), Positives = 109/271 (40%)
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAEN---PIECGCNILWLREMLVRRNTSAV 365
N +LNL+EN+ +++ L + +++N IE G L NT +
Sbjct: 89 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAF-----NGLPSLNTLEL 143
Query: 366 FCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTK 423
F N + ++ LS +L + +I AF + LR L L + RL+ I
Sbjct: 144 FDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEA 203
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
L L L +G ++ + L L+ LE++G + L +R G+F
Sbjct: 204 AFEGLVNLRYLNLGM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSFQGLTSLRKL 260
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECG 541
I E +A L +L LNL N S + P L + + NP C
Sbjct: 261 WLMHAQVATI-ERNAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCN 318
Query: 542 CNILWL----REMLVRRNTSAVFCNSPAPLK 568
C++LWL +E + T C++PA LK
Sbjct: 319 CDVLWLSWWLKETVPSNTTCCARCHAPAGLK 349
Score = 131 (51.2 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 64/249 (25%), Positives = 101/249 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR- 274
++ T L +P + TR L + +N ++ FK L +L+ L+++ NL R
Sbjct: 72 VICTRRELAEVPAS-IPVNTRY--LNLQENSIQVIRTDTFKHLRHLEILQLS--KNLVRK 126
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPE 333
+ GAF + + A L L L L+ N S S + P
Sbjct: 127 IEVGAF-NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPS 185
Query: 334 LRTIDIAE-NPIECGCNILWLREMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +D+ E +E + E LV R + CN +L+ L E+L +G
Sbjct: 186 LRRLDLGELKRLEYISEAAF--EGLVNLRYLNLGMCNLKDIPNLTALVRL--EELELSGN 241
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
L I +F+GL+ LR L L ++ +I L LEEL + N L F
Sbjct: 242 RLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP 301
Query: 452 LSYLKRLEI 460
L L+R+ +
Sbjct: 302 LHRLERVHL 310
Score = 130 (50.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 63/228 (27%), Positives = 91/228 (39%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L L +N +Q I T L LE L++ +N +E G F GL L LE+ + LT
Sbjct: 91 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD-NRLT 149
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESML-AW 331
V AF + I A +P+L L+L E SE+
Sbjct: 150 TVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 208
Query: 332 PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +++ ++ N+ L L S + P ++ L SL L A
Sbjct: 209 VNLRYLNLGMCNLKDIPNLTALVR-LEELELSGNRLDLIRPGSFQGLTSL--RKLWLMHA 265
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ I NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 266 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 130 (50.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 64/242 (26%), Positives = 100/242 (41%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGG 87
C +E L +P+ + + L L N I+ + + +L L+ + LS I +G
Sbjct: 74 CTRRE--LAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGA 131
Query: 88 FEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F L L+L N+ P Q +S R N I I F + +LR L
Sbjct: 132 FNGLPSLNTLELFDNRLTTVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 190
Query: 146 LDD-NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L + +L + +F L L L +G+ + + L RL L+L G L I
Sbjct: 191 LGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRP 248
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+F+GL+ LR L L ++ +I L LEEL + N L F L L+R+
Sbjct: 249 GSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERV 308
Query: 265 EI 266
+
Sbjct: 309 HL 310
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 65/169 (38%), Positives = 91/169 (53%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N + +I+ F GL +L L L DN+L +VPT +F YL L EL + N
Sbjct: 112 RHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNP 171
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
++ AFN + L LDL L IS+ AF GL LR L L L+ IP L+
Sbjct: 172 IESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTA 229
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L RLEELE+ N ++ G F+GL+ L++L + A T + + AF D
Sbjct: 230 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT-IERNAFDD 277
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 70/222 (31%), Positives = 103/222 (46%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPI 85
NLQE ++ VI + + ++ L LS N ++ ++ A SL ++L +P
Sbjct: 94 NLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 153
Query: 86 GGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
FE KL EL L +N + P + S RR+++ R+ I +A FEGL LR
Sbjct: 154 QAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRY 213
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L L+ +P + L L EL + N + G+F GL L L L A + I
Sbjct: 214 LNLGMCNLKDIP--NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE 271
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 272 RNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 207 (77.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 76/272 (27%), Positives = 111/272 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F+ L L IL L N +R + +F L L L + N TT+ AF
Sbjct: 97 ENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAF 156
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL+ I L L L +
Sbjct: 157 EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 216
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ + L L+ LE++G + L +R G+F IE
Sbjct: 217 GM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSF-QGLTSLRKLWLMHAQVATIER 272
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L LNL N S + P L + + NP C C++LWL +E
Sbjct: 273 NAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCNCDVLWLSWWLKET 331
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
+ T C++PA LK + + L C
Sbjct: 332 VPSNTTCCARCHAPAGLKGRYIGELDQSHFTC 363
Score = 169 (64.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + T +F +L L L++ N+ + GAFNGL L+ L+L LT
Sbjct: 91 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 150
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
+ AF LS LR L L +N ++SIP+ +++ L L++G+ + F+GL
Sbjct: 151 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVN 210
Query: 261 LKRLEITGASNL 272
L+ L + G NL
Sbjct: 211 LRYLNL-GMCNL 221
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 68/271 (25%), Positives = 109/271 (40%)
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAEN---PIECGCNILWLREMLVRRNTSAV 365
N +LNL+EN+ +++ L + +++N IE G L NT +
Sbjct: 89 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAF-----NGLPSLNTLEL 143
Query: 366 FCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTK 423
F N + ++ LS +L + +I AF + LR L L + RL+ I
Sbjct: 144 FDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEA 203
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
L L L +G ++ + L L+ LE++G + L +R G+F
Sbjct: 204 AFEGLVNLRYLNLGM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSFQGLTSLRKL 260
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECG 541
I E +A L +L LNL N S + P L + + NP C
Sbjct: 261 WLMHAQVATI-ERNAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCN 318
Query: 542 CNILWL----REMLVRRNTSAVFCNSPAPLK 568
C++LWL +E + T C++PA LK
Sbjct: 319 CDVLWLSWWLKETVPSNTTCCARCHAPAGLK 349
Score = 131 (51.2 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 64/249 (25%), Positives = 101/249 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR- 274
++ T L +P + TR L + +N ++ FK L +L+ L+++ NL R
Sbjct: 72 VICTRRELAEVPAS-IPVNTRY--LNLQENSIQVIRTDTFKHLRHLEILQLS--KNLVRK 126
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPE 333
+ GAF + + A L L L L+ N S S + P
Sbjct: 127 IEVGAF-NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPS 185
Query: 334 LRTIDIAE-NPIECGCNILWLREMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +D+ E +E + E LV R + CN +L+ L E+L +G
Sbjct: 186 LRRLDLGELKRLEYISEAAF--EGLVNLRYLNLGMCNLKDIPNLTALVRL--EELELSGN 241
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
L I +F+GL+ LR L L ++ +I L LEEL + N L F
Sbjct: 242 RLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP 301
Query: 452 LSYLKRLEI 460
L L+R+ +
Sbjct: 302 LHRLERVHL 310
Score = 130 (50.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 63/228 (27%), Positives = 91/228 (39%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L L +N +Q I T L LE L++ +N +E G F GL L LE+ + LT
Sbjct: 91 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD-NRLT 149
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESML-AW 331
V AF + I A +P+L L+L E SE+
Sbjct: 150 TVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 208
Query: 332 PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +++ ++ N+ L L S + P ++ L SL L A
Sbjct: 209 VNLRYLNLGMCNLKDIPNLTALVR-LEELELSGNRLDLIRPGSFQGLTSL--RKLWLMHA 265
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ I NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 266 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 313
Score = 130 (50.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 64/242 (26%), Positives = 100/242 (41%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGG 87
C +E L +P+ + + L L N I+ + + +L L+ + LS I +G
Sbjct: 74 CTRRE--LAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGA 131
Query: 88 FEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F L L+L N+ P Q +S R N I I F + +LR L
Sbjct: 132 FNGLPSLNTLELFDNRLTTVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 190
Query: 146 LDD-NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L + +L + +F L L L +G+ + + L RL L+L G L I
Sbjct: 191 LGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRP 248
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+F+GL+ LR L L ++ +I L LEEL + N L F L L+R+
Sbjct: 249 GSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERV 308
Query: 265 EI 266
+
Sbjct: 309 HL 310
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 65/169 (38%), Positives = 91/169 (53%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N + +I+ F GL +L L L DN+L +VPT +F YL L EL + N
Sbjct: 110 RHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNP 169
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
++ AFN + L LDL L IS+ AF GL LR L L L+ IP L+
Sbjct: 170 IESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTA 227
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L RLEELE+ N ++ G F+GL+ L++L + A T + + AF D
Sbjct: 228 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT-IERNAFDD 275
Score = 210 (79.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 70/222 (31%), Positives = 102/222 (45%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPI 85
NLQE + VI + + ++ L LS N ++ ++ A SL ++L +P
Sbjct: 92 NLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 151
Query: 86 GGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
FE KL EL L +N + P + S RR+++ R+ I +A FEGL LR
Sbjct: 152 QAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRY 211
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L L+ +P + L L EL + N + G+F GL L L L A + I
Sbjct: 212 LNLGMCNLKDIP--NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE 269
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 270 RNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 206 (77.6 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 76/272 (27%), Positives = 111/272 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F+ L L IL L N +R + +F L L L + N TT+ AF
Sbjct: 95 ENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAF 154
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL+ I L L L +
Sbjct: 155 EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ + L L+ LE++G + L +R G+F IE
Sbjct: 215 GM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSF-QGLTSLRKLWLMHAQVATIER 270
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L LNL N S + P L + + NP C C++LWL +E
Sbjct: 271 NAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCNCDVLWLSWWLKET 329
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
+ T C++PA LK + + L C
Sbjct: 330 VPSNTTCCARCHAPAGLKGRYIGELDQSHFTC 361
Score = 167 (63.8 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + T +F +L L L++ N+ + GAFNGL L+ L+L LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
+ AF LS LR L L +N ++SIP+ +++ L L++G+ + F+GL
Sbjct: 149 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVN 208
Query: 261 LKRLEITGASNL 272
L+ L + G NL
Sbjct: 209 LRYLNL-GMCNL 219
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 68/271 (25%), Positives = 108/271 (39%)
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAEN---PIECGCNILWLREMLVRRNTSAV 365
N +LNL+EN +++ L + +++N IE G L NT +
Sbjct: 87 NTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAF-----NGLPSLNTLEL 141
Query: 366 FCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTK 423
F N + ++ LS +L + +I AF + LR L L + RL+ I
Sbjct: 142 FDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEA 201
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
L L L +G ++ + L L+ LE++G + L +R G+F
Sbjct: 202 AFEGLVNLRYLNLGM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSFQGLTSLRKL 258
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECG 541
I E +A L +L LNL N S + P L + + NP C
Sbjct: 259 WLMHAQVATI-ERNAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCN 316
Query: 542 CNILWL----REMLVRRNTSAVFCNSPAPLK 568
C++LWL +E + T C++PA LK
Sbjct: 317 CDVLWLSWWLKETVPSNTTCCARCHAPAGLK 347
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 65/249 (26%), Positives = 102/249 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR- 274
++ T L +P + TR L + +NG ++ FK L +L+ L+++ NL R
Sbjct: 70 VICTRRELAEVPAS-IPVNTRY--LNLQENGIQVIRTDTFKHLRHLEILQLS--KNLVRK 124
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPE 333
+ GAF + + A L L L L+ N S S + P
Sbjct: 125 IEVGAF-NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPS 183
Query: 334 LRTIDIAE-NPIECGCNILWLREMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +D+ E +E + E LV R + CN +L+ L E+L +G
Sbjct: 184 LRRLDLGELKRLEYISEAAF--EGLVNLRYLNLGMCNLKDIPNLTALVRL--EELELSGN 239
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
L I +F+GL+ LR L L ++ +I L LEEL + N L F
Sbjct: 240 RLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP 299
Query: 452 LSYLKRLEI 460
L L+R+ +
Sbjct: 300 LHRLERVHL 308
Score = 129 (50.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 63/228 (27%), Positives = 91/228 (39%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L L +N +Q I T L LE L++ +N +E G F GL L LE+ + LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD-NRLT 147
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESML-AW 331
V AF + I A +P+L L+L E SE+
Sbjct: 148 TVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 332 PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +++ ++ N+ L L S + P ++ L SL L A
Sbjct: 207 VNLRYLNLGMCNLKDIPNLTALVR-LEELELSGNRLDLIRPGSFQGLTSL--RKLWLMHA 263
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ I NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 264 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 129 (50.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 64/242 (26%), Positives = 100/242 (41%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGG 87
C +E L +P+ + + L L N I+ + + +L L+ + LS I +G
Sbjct: 72 CTRRE--LAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGA 129
Query: 88 FEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F L L+L N+ P Q +S R N I I F + +LR L
Sbjct: 130 FNGLPSLNTLELFDNRLTTVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 188
Query: 146 LDD-NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L + +L + +F L L L +G+ + + L RL L+L G L I
Sbjct: 189 LGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRP 246
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+F+GL+ LR L L ++ +I L LEEL + N L F L L+R+
Sbjct: 247 GSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERV 306
Query: 265 EI 266
+
Sbjct: 307 HL 308
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 42/148 (28%), Positives = 63/148 (42%)
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
AC A R++ +L VP + L G+ V T F L L L
Sbjct: 60 ACSCSNQASRVI-CTRRELAEVPASIPVNTRYLNLQENGIQVIRT---DTFKHLRHLEIL 115
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 252
L + I AF GL L +L L DNRL ++PT+ L++L EL + N + +
Sbjct: 116 QLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS 175
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAF 280
F + L+RL++ L + + AF
Sbjct: 176 YAFNRVPSLRRLDLGELKRLEYISEAAF 203
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 65/169 (38%), Positives = 91/169 (53%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N + +I+ F GL +L L L DN+L +VPT +F YL L EL + N
Sbjct: 110 RHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNP 169
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
++ AFN + L LDL L IS+ AF GL LR L L L+ IP L+
Sbjct: 170 IESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTA 227
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L RLEELE+ N ++ G F+GL+ L++L + A T + + AF D
Sbjct: 228 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT-IERNAFDD 275
Score = 210 (79.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 70/222 (31%), Positives = 102/222 (45%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPI 85
NLQE + VI + + ++ L LS N ++ ++ A SL ++L +P
Sbjct: 92 NLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 151
Query: 86 GGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
FE KL EL L +N + P + S RR+++ R+ I +A FEGL LR
Sbjct: 152 QAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRY 211
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L L+ +P + L L EL + N + G+F GL L L L A + I
Sbjct: 212 LNLGMCNLKDIP--NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE 269
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 270 RNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 206 (77.6 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 76/272 (27%), Positives = 111/272 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F+ L L IL L N +R + +F L L L + N TT+ AF
Sbjct: 95 ENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAF 154
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL+ I L L L +
Sbjct: 155 EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ + L L+ LE++G + L +R G+F IE
Sbjct: 215 GM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSF-QGLTSLRKLWLMHAQVATIER 270
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L LNL N S + P L + + NP C C++LWL +E
Sbjct: 271 NAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCNCDVLWLSWWLKET 329
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
+ T C++PA LK + + L C
Sbjct: 330 VPSNTTCCARCHAPAGLKGRYIGELDQSHFTC 361
Score = 167 (63.8 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + T +F +L L L++ N+ + GAFNGL L+ L+L LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
+ AF LS LR L L +N ++SIP+ +++ L L++G+ + F+GL
Sbjct: 149 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVN 208
Query: 261 LKRLEITGASNL 272
L+ L + G NL
Sbjct: 209 LRYLNL-GMCNL 219
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 68/271 (25%), Positives = 108/271 (39%)
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAEN---PIECGCNILWLREMLVRRNTSAV 365
N +LNL+EN +++ L + +++N IE G L NT +
Sbjct: 87 NTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAF-----NGLPSLNTLEL 141
Query: 366 FCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTK 423
F N + ++ LS +L + +I AF + LR L L + RL+ I
Sbjct: 142 FDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEA 201
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
L L L +G ++ + L L+ LE++G + L +R G+F
Sbjct: 202 AFEGLVNLRYLNLGM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSFQGLTSLRKL 258
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECG 541
I E +A L +L LNL N S + P L + + NP C
Sbjct: 259 WLMHAQVATI-ERNAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCN 316
Query: 542 CNILWL----REMLVRRNTSAVFCNSPAPLK 568
C++LWL +E + T C++PA LK
Sbjct: 317 CDVLWLSWWLKETVPSNTTCCARCHAPAGLK 347
Score = 135 (52.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 65/249 (26%), Positives = 102/249 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR- 274
++ T L +P + TR L + +NG ++ FK L +L+ L+++ NL R
Sbjct: 70 VICTRRDLAEVPAS-IPVNTRY--LNLQENGIQVIRTDTFKHLRHLEILQLS--KNLVRK 124
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPE 333
+ GAF + + A L L L L+ N S S + P
Sbjct: 125 IEVGAF-NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPS 183
Query: 334 LRTIDIAE-NPIECGCNILWLREMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +D+ E +E + E LV R + CN +L+ L E+L +G
Sbjct: 184 LRRLDLGELKRLEYISEAAF--EGLVNLRYLNLGMCNLKDIPNLTALVRL--EELELSGN 239
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
L I +F+GL+ LR L L ++ +I L LEEL + N L F
Sbjct: 240 RLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP 299
Query: 452 LSYLKRLEI 460
L L+R+ +
Sbjct: 300 LHRLERVHL 308
Score = 129 (50.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 63/228 (27%), Positives = 91/228 (39%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L L +N +Q I T L LE L++ +N +E G F GL L LE+ + LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD-NRLT 147
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESML-AW 331
V AF + I A +P+L L+L E SE+
Sbjct: 148 TVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 332 PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +++ ++ N+ L L S + P ++ L SL L A
Sbjct: 207 VNLRYLNLGMCNLKDIPNLTALVR-LEELELSGNRLDLIRPGSFQGLTSL--RKLWLMHA 263
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ I NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 264 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 62/236 (26%), Positives = 98/236 (41%)
Query: 35 NLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEK 93
+L +P+ + + L L N I+ + + +L L+ + LS I +G F
Sbjct: 76 DLAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPS 135
Query: 94 LVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDD-NQ 150
L L+L N+ P Q +S R N I I F + +LR L L + +
Sbjct: 136 LNTLELFDNRLTTVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR 194
Query: 151 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGL 210
L + +F L L L +G+ + + L RL L+L G L I +F+GL
Sbjct: 195 LEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRPGSFQGL 252
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ LR L L ++ +I L LEEL + N L F L L+R+ +
Sbjct: 253 TSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHL 308
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 65/169 (38%), Positives = 91/169 (53%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N + +I+ F GL +L L L DN+L +VPT +F YL L EL + N
Sbjct: 110 RHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNP 169
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
++ AFN + L LDL L IS+ AF GL LR L L L+ IP L+
Sbjct: 170 IESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTA 227
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L RLEELE+ N ++ G F+GL+ L++L + A T + + AF D
Sbjct: 228 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT-IERNAFDD 275
Score = 210 (79.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 70/222 (31%), Positives = 102/222 (45%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPI 85
NLQE + VI + + ++ L LS N ++ ++ A SL ++L +P
Sbjct: 92 NLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 151
Query: 86 GGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
FE KL EL L +N + P + S RR+++ R+ I +A FEGL LR
Sbjct: 152 QAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRY 211
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L L+ +P + L L EL + N + G+F GL L L L A + I
Sbjct: 212 LNLGMCNLKDIP--NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE 269
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 270 RNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 206 (77.6 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 76/272 (27%), Positives = 111/272 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F+ L L IL L N +R + +F L L L + N TT+ AF
Sbjct: 95 ENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAF 154
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL+ I L L L +
Sbjct: 155 EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ + L L+ LE++G + L +R G+F IE
Sbjct: 215 GM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSF-QGLTSLRKLWLMHAQVATIER 270
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L LNL N S + P L + + NP C C++LWL +E
Sbjct: 271 NAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCNCDVLWLSWWLKET 329
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
+ T C++PA LK + + L C
Sbjct: 330 VPSNTTCCARCHAPAGLKGRYIGELDQSHFTC 361
Score = 167 (63.8 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + T +F +L L L++ N+ + GAFNGL L+ L+L LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
+ AF LS LR L L +N ++SIP+ +++ L L++G+ + F+GL
Sbjct: 149 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVN 208
Query: 261 LKRLEITGASNL 272
L+ L + G NL
Sbjct: 209 LRYLNL-GMCNL 219
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 68/271 (25%), Positives = 108/271 (39%)
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAEN---PIECGCNILWLREMLVRRNTSAV 365
N +LNL+EN +++ L + +++N IE G L NT +
Sbjct: 87 NTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAF-----NGLPSLNTLEL 141
Query: 366 FCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTK 423
F N + ++ LS +L + +I AF + LR L L + RL+ I
Sbjct: 142 FDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEA 201
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
L L L +G ++ + L L+ LE++G + L +R G+F
Sbjct: 202 AFEGLVNLRYLNLGM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSFQGLTSLRKL 258
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECG 541
I E +A L +L LNL N S + P L + + NP C
Sbjct: 259 WLMHAQVATI-ERNAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCN 316
Query: 542 CNILWL----REMLVRRNTSAVFCNSPAPLK 568
C++LWL +E + T C++PA LK
Sbjct: 317 CDVLWLSWWLKETVPSNTTCCARCHAPAGLK 347
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 65/249 (26%), Positives = 102/249 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR- 274
++ T L +P + TR L + +NG ++ FK L +L+ L+++ NL R
Sbjct: 70 VICTRRELAEVPAS-IPVNTRY--LNLQENGIQVIRTDTFKHLRHLEILQLS--KNLVRK 124
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPE 333
+ GAF + + A L L L L+ N S S + P
Sbjct: 125 IEVGAF-NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPS 183
Query: 334 LRTIDIAE-NPIECGCNILWLREMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +D+ E +E + E LV R + CN +L+ L E+L +G
Sbjct: 184 LRRLDLGELKRLEYISEAAF--EGLVNLRYLNLGMCNLKDIPNLTALVRL--EELELSGN 239
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
L I +F+GL+ LR L L ++ +I L LEEL + N L F
Sbjct: 240 RLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP 299
Query: 452 LSYLKRLEI 460
L L+R+ +
Sbjct: 300 LHRLERVHL 308
Score = 129 (50.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 63/228 (27%), Positives = 91/228 (39%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L L +N +Q I T L LE L++ +N +E G F GL L LE+ + LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD-NRLT 147
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESML-AW 331
V AF + I A +P+L L+L E SE+
Sbjct: 148 TVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 332 PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +++ ++ N+ L L S + P ++ L SL L A
Sbjct: 207 VNLRYLNLGMCNLKDIPNLTALVR-LEELELSGNRLDLIRPGSFQGLTSL--RKLWLMHA 263
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ I NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 264 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 129 (50.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 64/242 (26%), Positives = 100/242 (41%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGG 87
C +E L +P+ + + L L N I+ + + +L L+ + LS I +G
Sbjct: 72 CTRRE--LAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGA 129
Query: 88 FEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F L L+L N+ P Q +S R N I I F + +LR L
Sbjct: 130 FNGLPSLNTLELFDNRLTTVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 188
Query: 146 LDD-NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L + +L + +F L L L +G+ + + L RL L+L G L I
Sbjct: 189 LGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRP 246
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+F+GL+ LR L L ++ +I L LEEL + N L F L L+R+
Sbjct: 247 GSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERV 306
Query: 265 EI 266
+
Sbjct: 307 HL 308
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 42/148 (28%), Positives = 63/148 (42%)
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
AC A R++ +L VP + L G+ V T F L L L
Sbjct: 60 ACSCSNQASRVI-CTRRELAEVPASIPVNTRYLNLQENGIQVIRT---DTFKHLRHLEIL 115
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 252
L + I AF GL L +L L DNRL ++PT+ L++L EL + N + +
Sbjct: 116 QLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS 175
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAF 280
F + L+RL++ L + + AF
Sbjct: 176 YAFNRVPSLRRLDLGELKRLEYISEAAF 203
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 227 (85.0 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 65/169 (38%), Positives = 91/169 (53%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N + +I+ F GL +L L L DN+L +VPT +F YL L EL + N
Sbjct: 110 RHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNP 169
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
++ AFN + L LDL L IS+ AF GL LR L L L+ IP L+
Sbjct: 170 IESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTA 227
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L RLEELE+ N ++ G F+GL+ L++L + A T + + AF D
Sbjct: 228 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT-IERNAFDD 275
Score = 210 (79.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 70/222 (31%), Positives = 102/222 (45%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPI 85
NLQE + VI + + ++ L LS N ++ ++ A SL ++L +P
Sbjct: 92 NLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPT 151
Query: 86 GGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
FE KL EL L +N + P + S RR+++ R+ I +A FEGL LR
Sbjct: 152 QAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRY 211
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L L+ +P + L L EL + N + G+F GL L L L A + I
Sbjct: 212 LNLGMCNLKDIP--NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIE 269
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 270 RNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 206 (77.6 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 76/272 (27%), Positives = 111/272 (40%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F+ L L IL L N +R + +F L L L + N TT+ AF
Sbjct: 95 ENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAF 154
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL+ I L L L +
Sbjct: 155 EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ + L L+ LE++G + L +R G+F IE
Sbjct: 215 GM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSF-QGLTSLRKLWLMHAQVATIER 270
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L LNL N S + P L + + NP C C++LWL +E
Sbjct: 271 NAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCNCDVLWLSWWLKET 329
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
+ T C++PA LK + + L C
Sbjct: 330 VPSNTTCCARCHAPAGLKGRYIGELDQSHFTC 361
Score = 167 (63.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + T +F +L L L++ N+ + GAFNGL L+ L+L LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 148
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
+ AF LS LR L L +N ++SIP+ +++ L L++G+ + F+GL
Sbjct: 149 VPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVN 208
Query: 261 LKRLEITGASNL 272
L+ L + G NL
Sbjct: 209 LRYLNL-GMCNL 219
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 68/271 (25%), Positives = 108/271 (39%)
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAEN---PIECGCNILWLREMLVRRNTSAV 365
N +LNL+EN +++ L + +++N IE G L NT +
Sbjct: 87 NTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAF-----NGLPSLNTLEL 141
Query: 366 FCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTK 423
F N + ++ LS +L + +I AF + LR L L + RL+ I
Sbjct: 142 FDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEA 201
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
L L L +G ++ + L L+ LE++G + L +R G+F
Sbjct: 202 AFEGLVNLRYLNLGM--CNLKDIPNLTALVRLEELELSG-NRLDLIRPGSFQGLTSLRKL 258
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECG 541
I E +A L +L LNL N S + P L + + NP C
Sbjct: 259 WLMHAQVATI-ERNAFDDLKSLEELNLSHNNLMSLPHDLFT-PLHRLERVHLNHNPWHCN 316
Query: 542 CNILWL----REMLVRRNTSAVFCNSPAPLK 568
C++LWL +E + T C++PA LK
Sbjct: 317 CDVLWLSWWLKETVPSNTTCCARCHAPAGLK 347
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 65/249 (26%), Positives = 102/249 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR- 274
++ T L +P + TR L + +NG ++ FK L +L+ L+++ NL R
Sbjct: 70 VICTRRELAEVPAS-IPVNTRY--LNLQENGIQVIRTDTFKHLRHLEILQLS--KNLVRK 124
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPE 333
+ GAF + + A L L L L+ N S S + P
Sbjct: 125 IEVGAF-NGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPS 183
Query: 334 LRTIDIAE-NPIECGCNILWLREMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +D+ E +E + E LV R + CN +L+ L E+L +G
Sbjct: 184 LRRLDLGELKRLEYISEAAF--EGLVNLRYLNLGMCNLKDIPNLTALVRL--EELELSGN 239
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
L I +F+GL+ LR L L ++ +I L LEEL + N L F
Sbjct: 240 RLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTP 299
Query: 452 LSYLKRLEI 460
L L+R+ +
Sbjct: 300 LHRLERVHL 308
Score = 129 (50.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 63/228 (27%), Positives = 91/228 (39%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R L L +N +Q I T L LE L++ +N +E G F GL L LE+ + LT
Sbjct: 89 RYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFD-NRLT 147
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESML-AW 331
V AF + I A +P+L L+L E SE+
Sbjct: 148 TVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL 206
Query: 332 PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
LR +++ ++ N+ L L S + P ++ L SL L A
Sbjct: 207 VNLRYLNLGMCNLKDIPNLTALVR-LEELELSGNRLDLIRPGSFQGLTSL--RKLWLMHA 263
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ I NAF L L L L+ N L S+P + L RLE + + N
Sbjct: 264 QVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 311
Score = 129 (50.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 64/242 (26%), Positives = 100/242 (41%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGG 87
C +E L +P+ + + L L N I+ + + +L L+ + LS I +G
Sbjct: 72 CTRRE--LAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGA 129
Query: 88 FEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F L L+L N+ P Q +S R N I I F + +LR L
Sbjct: 130 FNGLPSLNTLELFDNRLTTVPTQAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLD 188
Query: 146 LDD-NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L + +L + +F L L L +G+ + + L RL L+L G L I
Sbjct: 189 LGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN--LTALVRLEELELSGNRLDLIRP 246
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+F+GL+ LR L L ++ +I L LEEL + N L F L L+R+
Sbjct: 247 GSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERV 306
Query: 265 EI 266
+
Sbjct: 307 HL 308
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 42/148 (28%), Positives = 63/148 (42%)
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
AC A R++ +L VP + L G+ V T F L L L
Sbjct: 60 ACSCSNQASRVI-CTRRELAEVPASIPVNTRYLNLQENGIQVIRT---DTFKHLRHLEIL 115
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 252
L + I AF GL L +L L DNRL ++PT+ L++L EL + N + +
Sbjct: 116 QLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS 175
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAF 280
F + L+RL++ L + + AF
Sbjct: 176 YAFNRVPSLRRLDLGELKRLEYISEAAF 203
>FB|FBgn0004364 [details] [associations]
symbol:18w "18 wheeler" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;IDA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0006955
"immune response" evidence=IEP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0019731 "antibacterial humoral response"
evidence=NAS;IMP;TAS] [GO:0048598 "embryonic morphogenesis"
evidence=TAS] [GO:0006952 "defense response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0019730 "antimicrobial
humoral response" evidence=IMP] InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
GO:GO:0048598 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 GO:GO:0019731 InterPro:IPR000372
SMART:SM00013 GO:GO:0004888 InterPro:IPR026906 Pfam:PF13306
SUPFAM:SSF52200 FlyBase:FBgn0004364 EMBL:L23171 PIR:T13852
PIR:T13887 HSSP:O60603 ProteinModelPortal:Q24591 STRING:Q24591
PRIDE:Q24591 InParanoid:Q24591 ArrayExpress:Q24591 Bgee:Q24591
Uniprot:Q24591
Length = 1389
Score = 211 (79.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 122/474 (25%), Positives = 190/474 (40%)
Query: 88 FEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACF-EGLTALRIL 144
F+ ++L EL L N + P+ + CS+ S + + + QNRI + F E L A L
Sbjct: 141 FQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLT-QNRIRSAEFLGFSEKLCAGSAL 199
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD--GAFNGLGRLSALDLRGAGLTNI 202
N +V S L L V N +L D GA + L RL L L+ ++ +
Sbjct: 200 ---SNANGAVSGGS-----ELQTLDVSFNELRSLPDAWGA-SRLRRLQTLSLQHNNISTL 250
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ NA GLS LR L ++ N L S+P++ + L EL + N L G L L
Sbjct: 251 APNALAGLSSLRVLNISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLL 310
Query: 263 RLEITGASNLT--RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENA 320
L+++G + LT V FA I L L L+++ N+
Sbjct: 311 VLDLSG-NQLTSHHVDNSTFAGLIRLIVLNLSNNALTR-IGSKTFKELYFLQILDMRNNS 368
Query: 321 FTSFSE-SMLAWPELRTIDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPAPLKY 375
E + L L T+++AEN + N L++ L N S A +
Sbjct: 369 IGHIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQA---F 425
Query: 376 KSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 435
++ L DL + LT + + A + LS L++L L +N++ L +L L
Sbjct: 426 RNCSDLKELDL--SSNQLTEVPE-AVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLR 482
Query: 436 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIE 495
+ N + G F+ L L L + + + + +GAF I
Sbjct: 483 LIDNRIGNITVGMFQDLPRLSVLNLA-KNRIQSIERGAFDKNTEIEAIRLDKNFLTDI-- 539
Query: 496 EDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLRE 549
L +L LNL EN F + + L+ +DI N IE N L+E
Sbjct: 540 NGIFATLASLLWLNLSENHLVWFDYAFIP-SNLKWLDIHGNYIEALGNYYKLQE 592
Score = 205 (77.2 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 86/322 (26%), Positives = 137/322 (42%)
Query: 30 NLQEANLDVIPSH---SNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIG 86
+L + N+ +P S PS+Q L L+ NRI++ + LS+ + G
Sbjct: 151 HLGDNNIRQLPEGVWCSMPSLQLLNLTQNRIRSAEFLGFSEKLCAGSALSNANGAVS--G 208
Query: 87 GFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFG--QNRISRIDQACFEGLTALRIL 144
G E Q +++ N + P S + RR++ N IS + GL++LR+L
Sbjct: 209 GSELQT--LDVSFNELRSLPDAWGASRL--RRLQTLSLQHNNISTLAPNALAGLSSLRVL 264
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN--I 202
+ N L S+P+ +F L EL + N L G + L +L LDL G LT+ +
Sbjct: 265 NISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKGLLHRLEQLLVLDLSGNQLTSHHV 324
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
++ F GL L L L++N L I +K +L L+ L++ N +E G F L L
Sbjct: 325 DNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQILDMRNNSIGHIEEGAFLPLYNLH 384
Query: 263 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFT 322
L + A N + +E A +L L+L N T
Sbjct: 385 TLNL--AENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQLT 442
Query: 323 SFSESMLAWPELRTIDIAENPI 344
E++ L+T+D+ EN I
Sbjct: 443 EVPEAVQDLSMLKTLDLGENQI 464
Score = 198 (74.8 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 115/468 (24%), Positives = 194/468 (41%)
Query: 68 LSLQ-HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVE---- 120
L LQ +L H + L P G F +KL EL+++ K P ++S +R+
Sbjct: 67 LDLQCSQELLHASELA-P-GLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESH 124
Query: 121 --IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
++G + + F+GL L L+L DN +R +P + + L L + N +
Sbjct: 125 NAVWGPGKTLELHGQSFQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLTQN---RI 181
Query: 179 ADGAFNGLG-RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTR 236
F G +L A G+ L+N ++ A G S L++L ++ N L+S+P S+L R
Sbjct: 182 RSAEFLGFSEKLCA----GSALSN-ANGAVSGGSELQTLDVSFNELRSLPDAWGASRLRR 236
Query: 237 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX 296
L+ L + N S L GLS L+ L I+ ++L + AFA
Sbjct: 237 LQTLSLQHNNISTLAPNALAGLSSLRVLNIS-YNHLVSLPSEAFAGNKELRELHLQGNDL 295
Query: 297 XXXIEEGALVGLPNLYHLNLKENAFTSF---SESMLAWPELRTIDIAENPI-ECGCNI-- 350
+ +G L L L L+L N TS + + L ++++ N + G
Sbjct: 296 YE-LPKGLLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFK 354
Query: 351 -LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRS 409
L+ ++L RN S A L +L +L+ A L + + F GL L
Sbjct: 355 ELYFLQILDMRNNSIGHIEEGAFLPLYNLHTLNL-----AENRLHTLDNRIFNGLYVLTK 409
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 469
L L +N + + ++ + L+EL++ N + + + LS LK L++ G + ++
Sbjct: 410 LTLNNNLVSIVESQAFRNCSDLKELDLSSNQLTEVPEAV-QDLSMLKTLDL-GENQISEF 467
Query: 470 RKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTS 517
+ F + I LP L LNL +N S
Sbjct: 468 KNNTFRNLNQLTGLRLIDNRIGNITV-GMFQDLPRLSVLNLAKNRIQS 514
Score = 148 (57.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 93/365 (25%), Positives = 148/365 (40%)
Query: 46 SIQRLVLSTNRIKTVDSAI--PIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
++ L L+ NR+ T+D+ I +Y+ L + L++ I+ F L EL L+ N+
Sbjct: 382 NLHTLNLAENRLHTLDNRIFNGLYV-LTKLTLNNNLVSIVESQAFRNCSDLKELDLSSNQ 440
Query: 104 --HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
P+ + +S + G+N+IS F L L L L DN++ ++ F
Sbjct: 441 LTEVPEAV--QDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRLIDNRIGNITVGMFQD 498
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L+ L + N ++ GAF+ + A+ L LT+I+ F L+ L L L++N
Sbjct: 499 LPRLSVLNLAKNRIQSIERGAFDKNTEIEAIRLDKNFLTDIN-GIFATLASLLWLNLSEN 557
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L + + L+ L+I N L G + L R+ AS+ GA +
Sbjct: 558 HLVWFDYAFIP--SNLKWLDIHGNYIEAL--GNYYKLQEEIRVTTLDASHNRITEIGAMS 613
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIA 340
I+ V L ++L N + S + L P +
Sbjct: 614 -VPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVP 672
Query: 341 E-----NPIECGCNILWLREM--LVRRNTSAVF------CNSP----APLKYKSLISLSA 383
E NP EC C++ WL+ + L R V C P APL+ L SLSA
Sbjct: 673 EFYLGGNPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLR--PLASLSA 730
Query: 384 EDLGC 388
D C
Sbjct: 731 SDFVC 735
Score = 142 (55.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 90/382 (23%), Positives = 142/382 (37%)
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK---- 233
LA G F L +LS L + L + NAF GL L+ L L + P K L
Sbjct: 81 LAPGLFRQLQKLSELRIDACKLQRVPPNAFEGLMSLKRLTLESHNAVWGPGKTLELHGQS 140
Query: 234 ---LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 290
L L EL +G N L G + + L+ L +T N R+R F
Sbjct: 141 FQGLKELSELHLGDNNIRQLPEGVWCSMPSLQLLNLT--QN--RIRSAEFLGFSEKLCAG 196
Query: 291 XXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGC 348
GA+ G L L++ N S ++ A L+T+ + N
Sbjct: 197 SALSNA-----NGAVSGGSELQTLDVSFNELRSLPDAWGASRLRRLQTLSLQHN------ 245
Query: 349 NILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAE---------DLGCAGAGLTNISDN 399
NI L + +S N + Y L+SL +E +L G L +
Sbjct: 246 NISTLAPNALAGLSSLRVLN----ISYNHLVSLPSEAFAGNKELRELHLQGNDLYELPKG 301
Query: 400 AFRGLSGLRSLVLTDNRLQS--IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 457
L L L L+ N+L S + + L RL L + N + + + FK L +L+
Sbjct: 302 LLHRLEQLLVLDLSGNQLTSHHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFKELYFLQI 361
Query: 458 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTS 517
L++ S + + +GAF + + GL L L L N +
Sbjct: 362 LDMRNNS-IGHIEEGAFLPLYNLHTLNLAENRLHTL-DNRIFNGLYVLTKLTLNNNLVSI 419
Query: 518 F-SESMLAWPELRTIDIAENPI 538
S++ +L+ +D++ N +
Sbjct: 420 VESQAFRNCSDLKELDLSSNQL 441
Score = 127 (49.8 bits), Expect = 0.00035, P = 0.00035
Identities = 41/124 (33%), Positives = 57/124 (45%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N + ++ G LR LYL+ + L ++ S L L L + N T L F
Sbjct: 802 NNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQLVNLRVLHLENNKLTALEGTEFR 861
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
LG L L L LT+IS+ F L L L L +NRL S+P Q L+ L +G+
Sbjct: 862 SLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYRH--SLQGLTLGR 919
Query: 245 NGFS 248
N +S
Sbjct: 920 NAWS 923
Score = 77 (32.2 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 35/124 (28%), Positives = 53/124 (42%)
Query: 326 ESMLAWPELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSP--APLKYKSLISL 381
+ + A P D+++ ++ G N+ L + + RRN A++ N+ L+ SL L
Sbjct: 781 QDLAALPNRIPQDVSDLYLD-GNNMPELEVGHLTGRRNLRALYLNASNLMTLQNGSLAQL 839
Query: 382 -SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
+ L LT + FR L LR L L +N L I L LE L + N
Sbjct: 840 VNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLEVLRLDNNR 899
Query: 441 FSML 444
S L
Sbjct: 900 LSSL 903
Score = 71 (30.1 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
LT+IS+ F L L L L +NRL S+P Q L+ L +G+N +S
Sbjct: 876 LTHISNATFEPLVSLEVLRLDNNRLSSLPHLQYRH--SLQGLTLGRNAWS 923
Score = 58 (25.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 30/136 (22%), Positives = 58/136 (42%)
Query: 340 AENPIECGCNILWLREMLVRRNTSAVFC--NSPAPLKYKSLISL-SAEDLGCAGAGLTNI 396
A N ++CG L + ++ S ++ N+ L+ L + L + L +
Sbjct: 772 ATNIVDCGRQDLAALPNRIPQDVSDLYLDGNNMPELEVGHLTGRRNLRALYLNASNLMTL 831
Query: 397 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
+ + L LR L L +N+L ++ + L L EL + N + + F+ L L+
Sbjct: 832 QNGSLAQLVNLRVLHLENNKLTALEGTEFRSLGLLRELYLHNNMLTHISNATFEPLVSLE 891
Query: 457 --RLEITGASNLTRVR 470
RL+ S+L ++
Sbjct: 892 VLRLDNNRLSSLPHLQ 907
Score = 54 (24.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 21/56 (37%), Positives = 26/56 (46%)
Query: 536 NPIECGCNILWLREM--LVRRNTSAVF------CNSP----APLKYKSLISLSAED 579
NP EC C++ WL+ + L R V C P APL+ L SLSA D
Sbjct: 679 NPFECDCSMEWLQRINNLTTRQHPHVVDLGNIECLMPHSRSAPLR--PLASLSASD 732
>RGD|1560026 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1560026 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:DQ119102 IPI:IPI00197050 RefSeq:NP_001032413.1
UniGene:Rn.198672 ProteinModelPortal:Q45R42 SMR:Q45R42 PRIDE:Q45R42
Ensembl:ENSRNOT00000010673 GeneID:641521 KEGG:rno:641521
UCSC:RGD:1560026 InParanoid:Q45R42 NextBio:714703
Genevestigator:Q45R42 Uniprot:Q45R42
Length = 652
Score = 226 (84.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 80/253 (31%), Positives = 118/253 (46%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G+N I +I+ F GL +L L L DN L +P+ +F YL L EL + N ++ A
Sbjct: 106 GRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYA 165
Query: 183 FNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 241
FN + L LDL L IS+ AF GL L+ L L ++ +P L+ L LEELE
Sbjct: 166 FNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN--LTPLVGLEELE 223
Query: 242 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE 301
+ N F + G F GLS LK+L + S ++ + + AF D +
Sbjct: 224 MSGNHFPEIRPGSFHGLSSLKKLWVMN-SQVSLIERNAF-DGLASLVELNLAHNNLSSLP 281
Query: 302 EGALVGLPNLYHLNLKENAFTSFSESM-LAWPELRTIDIAENPIECG-CNI-LWLR-EML 357
L L L+L N + + + LAW LR I N CG C+ + +R L
Sbjct: 282 HDLFTPLRYLVELHLHHNPWNCDCDILWLAW-WLREY-IPTNSTCCGRCHAPMHMRGRYL 339
Query: 358 VRRNTSAVFCNSP 370
V + ++ C++P
Sbjct: 340 VEVDQASFQCSAP 352
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 72/273 (26%), Positives = 114/273 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F L L +L L N +R + +F L L L + N T + GAF
Sbjct: 83 ENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAF 142
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + L L L + +L+ I L L+ L +
Sbjct: 143 EYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 202
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ + L L+ LE++G ++ +R G+F IE
Sbjct: 203 GM--CNIKDMPNLTPLVGLEELEMSG-NHFPEIRPGSF-HGLSSLKKLWVMNSQVSLIER 258
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A GL +L LNL N +S + P L + + NP C C+ILWL RE
Sbjct: 259 NAFDGLASLVELNLAHNNLSSLPHDLFT-PLRYLVELHLHHNPWNCDCDILWLAWWLREY 317
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
+ +T C++P ++ + L+ + C+
Sbjct: 318 IPTNSTCCGRCHAPMHMRGRYLVEVDQASFQCS 350
Score = 198 (74.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 68/223 (30%), Positives = 107/223 (47%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWL-IIP 84
NL E N+ +I + + + L L N I+ ++ A SL ++L WL +IP
Sbjct: 80 NLMENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLEL-FDNWLTVIP 138
Query: 85 IGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
G FE KL EL L +N + P + S R+++ ++ I + FEGL L+
Sbjct: 139 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 198
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L ++ +P + + +G L EL + N F + G+F+GL L L + + ++ I
Sbjct: 199 YLNLGMCNIKDMPNLTPL-VG-LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 256
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
NAF GL+ L L L N L S+P + L L EL + N
Sbjct: 257 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 299
Score = 176 (67.0 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 46/132 (34%), Positives = 71/132 (53%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + +F +L L L++G N + GAFNGL L+ L+L LT
Sbjct: 77 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTV 136
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
I AF LS LR L L +N ++SIP+ +++ L L++G+ + G F+GL
Sbjct: 137 IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFN 196
Query: 261 LKRLEITGASNL 272
LK L + G N+
Sbjct: 197 LKYLNL-GMCNI 207
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 66/234 (28%), Positives = 97/234 (41%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S R L L +N +Q I L LE L++G+N +E G F GL+ L LE+ +
Sbjct: 74 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFD-N 132
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESML 329
LT + GAF + I A +P+L L+L E SE
Sbjct: 133 WLTVIPSGAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEG-- 189
Query: 330 AWPELRTIDIAENPIECG-CNILWLREM--LVRRNTSAVFCNSPAPLKYKSLISLSA-ED 385
A+ L + + G CNI + + LV + N ++ S LS+ +
Sbjct: 190 AFEGLFNLKY----LNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKK 245
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L + ++ I NAF GL+ L L L N L S+P + L L EL + N
Sbjct: 246 LWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 299
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 60/247 (24%), Positives = 99/247 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
+V T L +P + + TR L + +N M++A F+ L +L+ L++ G + + ++
Sbjct: 58 VVCTRRGLSEVP-QGIPSNTRY--LNLMENNIQMIQADTFRHLHHLEVLQL-GRNAIRQI 113
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA L L L L+ N S S + P L
Sbjct: 114 EVGAF-NGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSL 172
Query: 335 RTIDIAE-NPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGL 393
+D+ E +E + + + + CN L+ L E+L +G
Sbjct: 173 MRLDLGELKKLEYISEGAF-EGLFNLKYLNLGMCNIKDMPNLTPLVGL--EELEMSGNHF 229
Query: 394 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 453
I +F GLS L+ L + ++++ I L L EL + N S L F L
Sbjct: 230 PEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 289
Query: 454 YLKRLEI 460
YL L +
Sbjct: 290 YLVELHL 296
Score = 130 (50.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 67/280 (23%), Positives = 114/280 (40%)
Query: 307 GLP-NLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNI-LWLREMLVRRNTS 363
G+P N +LNL EN +++ L + + N I I + L NT
Sbjct: 71 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNAIR---QIEVGAFNGLASLNTL 127
Query: 364 AVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIP 421
+F N + + LS +L + +I AF + L L L + +L+ I
Sbjct: 128 ELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS 187
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 481
L L+ L +G ++ + L L+ LE++G ++ +R G+F
Sbjct: 188 EGAFEGLFNLKYLNLGM--CNIKDMPNLTPLVGLEELEMSG-NHFPEIRPGSF-HGLSSL 243
Query: 482 XXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIE 539
+IE +A GL +L LNL N +S + P L + + NP
Sbjct: 244 KKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT-PLRYLVELHLHHNPWN 302
Query: 540 CGCNILWL----REMLVRRNTSAVFCNSPAPLKYKSLISL 575
C C+ILWL RE + +T C++P ++ + L+ +
Sbjct: 303 CDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLVEV 342
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 231 (86.4 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 99/417 (23%), Positives = 160/417 (38%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L +T I AF+ L L L L N LQ P
Sbjct: 65 NNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFL 124
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
++L L++ +N + F+G +K L++ ++++ + GAF
Sbjct: 125 GTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLD-YNHISCIEDGAFR-ALRDLEVLTL 182
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW--------PELRTIDIAENPI 344
+ + +P L L N + + LAW P + P
Sbjct: 183 NNNNITRLSVASFNHMPKLRTFRLHSNNL--YCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 345 EC-GCNILWL--REMLVRRNTSAV--FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
G N+ + RE + TS C L + + S + C G GLT I N
Sbjct: 241 HLRGHNVAEVQKREFVCSGGTSGKEPACQCSV-LHCPAACTCSNNIVDCRGKGLTEIPTN 299
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
++ +R L N ++ IP S +L +++ N S L F+GL L L
Sbjct: 300 LPETITEIR---LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLV 356
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+ G + +T + K F + + DA L NL L+L +N + +
Sbjct: 357 LYG-NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 414
Query: 520 ESMLAWP--ELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSL 572
+ + P ++T+ +A+NP C C++ WL + L TS C SP L K +
Sbjct: 415 KGTFS-PLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRI 470
Score = 213 (80.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 72/292 (24%), Positives = 128/292 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL G +T I+ F GL LR L L +N++ +I L LE L + +N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F G S L RL+++ + + + + AF IE+GA L +L
Sbjct: 120 ELLFLGTSKLYRLDLS-ENQIQAIPRKAFRGAVDIKNLQLDYNHISC-IEDGAFRALRDL 177
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T S S P+LRT + N + C C++ WL + L +R ++ C
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR-GLSGLRSLVLTDNRLQSIPTKQLSK 427
P+ L+ ++ + + C+G T+ + A + + + N + K L++
Sbjct: 238 GPSHLRGHNVAEVQKREFVCSGG--TSGKEPACQCSVLHCPAACTCSNNIVDCRGKGLTE 295
Query: 428 L-TRLEE----LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+ T L E + + QN ++ G F L+R++++ + ++ + AF
Sbjct: 296 IPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSN-NQISELAPDAF 346
Score = 179 (68.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 118/549 (21%), Positives = 207/549 (37%)
Query: 46 SIQRLVLSTNRIKT--VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
S+Q L+L+ N+I VD+ ++ +L + L I G F P + + L N
Sbjct: 375 SLQLLLLNANKINCLRVDAFQDLH-NLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN- 432
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEG--LTALRILYLDDNQLRSVPTPSFIY 161
P +C + N I C L RI + + R +
Sbjct: 433 --P--FICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFI 488
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRL--SALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
G + R L+ AD A R + +D LT I D+ + + LR L
Sbjct: 489 PGT-EDYRSKLSG-DCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELR---LN 543
Query: 220 DNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
+N + T KL +L ++ N + +E G F+G S + + +T ++ L V+
Sbjct: 544 NNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT-SNRLENVQHK 602
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTI 337
F + + +GL ++ L+L +N T+ + L T+
Sbjct: 603 MFKGLESLKTLMLRSNRISC-VGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTL 661
Query: 338 DIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTN 395
++ NP C C + WL E L ++ T C P LK + ++ +D C N
Sbjct: 662 NLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDN 721
Query: 396 ISDNAFR---GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
R + L ++V N+ + K + + + EL + N F+++ K L
Sbjct: 722 SCSPLSRCPAECTCLDTVVRCSNKALKVLPKGIPR--DVTELYLDGNQFTLVP----KEL 775
Query: 453 SYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNL 510
S K L + SN ++ + +F++ I GL +L L+L
Sbjct: 776 SNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CIPPRTFDGLKSLRLLSL 834
Query: 511 KENAFTSFSESMLAWPELRTID---IAENPIECGCNILWLREMLVR--RNTSAVFCNSPA 565
N + E A+ +L + I NP+ C CN+ WL + + + C P
Sbjct: 835 HGNDISVVPEG--AFNDLAALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPG 892
Query: 566 PLKYKSLIS 574
+ K L++
Sbjct: 893 EMADKLLLT 901
Score = 172 (65.6 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 57/209 (27%), Positives = 88/209 (42%)
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
S V C+ A I + E L G +T I+ F GL LR L L +N++ +I
Sbjct: 37 STVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKITTIER 96
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
L LE L + +N + F G S L RL+++ + + + + AF
Sbjct: 97 GAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLS-ENQIQAIPRKAFRGAVDIKN 155
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECG 541
IE+ A L +L L L N T S S P+LRT + N + C
Sbjct: 156 LQLDYNHIS-CIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 214
Query: 542 CNILWLREMLVRRNTSAVF--CNSPAPLK 568
C++ WL + L +R ++ C P+ L+
Sbjct: 215 CHLAWLSDWLRQRPRVGLYTQCMGPSHLR 243
Score = 147 (56.8 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 45/155 (29%), Positives = 72/155 (46%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+++ G N I+RI + F GL LR+L L +N++ ++ +F L L LR+ N
Sbjct: 59 RLDLNGNN-ITRITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQL 117
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ F G +L LDL + I AFRG +++L L N + I L L
Sbjct: 118 FPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDL 177
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
E L + N + L F + L+ + ++NL
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLH-SNNL 211
Score = 142 (55.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 96/396 (24%), Positives = 167/396 (42%)
Query: 64 IPIYL--SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRV 119
IP L ++ + L + +IP G F P +KL + L++N+ + S +
Sbjct: 296 IPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 355
Query: 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
++G N+I+ + ++ FEGL +L++L L+ N++ + +F L L L + N T+A
Sbjct: 356 VLYG-NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 414
Query: 180 DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 239
G F+ L + + L A I D + L+ L N +++ + S RL
Sbjct: 415 KGTFSPLRAIQTMHL--AQNPFICDCHLKWLADY----LHTNPIETSGARCTSP-RRLAN 467
Query: 240 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG-AFADXXXXXXXXXXXXXXXX 298
IGQ +++ F+ S ++ I G + G FAD
Sbjct: 468 KRIGQ-----IKSKKFR-CSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDC 521
Query: 299 XIEEGALVGLPN---LY--HLNLKENAFTSFSESML--AWPELRTIDIAENPI---ECGC 348
++ L +P+ Y L L N FT + + P+LR I+ + N I E G
Sbjct: 522 SNQK--LTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGA 579
Query: 349 --NILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
+ E+L+ N N + +K L SL L ++ + +++F GLS
Sbjct: 580 FEGASGVNEILLTSNRLE---NVQHKM-FKGLESLKT--LMLRSNRISCVGNDSFIGLSS 633
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
+R L L DN++ +I L L L + N F+
Sbjct: 634 VRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFN 669
Score = 137 (53.3 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 46/196 (23%), Positives = 83/196 (42%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEA 446
C+ LT I D+ + + LR L +N + T KL +L ++ N + +E
Sbjct: 521 CSNQKLTKIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEE 577
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
G F+G S + + +T ++ L V+ F + D+ +GL ++
Sbjct: 578 GAFEGASGVNEILLT-SNRLENVQHKMFKGLESLKTLMLRSNRIS-CVGNDSFIGLSSVR 635
Query: 507 HLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNS 563
L+L +N T+ + L T+++ NP C C + WL E L ++ T C
Sbjct: 636 LLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQK 695
Query: 564 PAPLKYKSLISLSAED 579
P LK + ++ +D
Sbjct: 696 PYFLKEIPIQDVAIQD 711
Score = 126 (49.4 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 41/163 (25%), Positives = 71/163 (43%)
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
H P CS V+ G+ ++ I E +T +R L+ N ++ +P +F
Sbjct: 274 HCPAACTCS---NNIVDCRGKG-LTEIPTNLPETITEIR---LEQNSIKVIPPGAFSPYK 326
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L + + N + LA AF GL L++L L G +T + + F GL L+ L+L N++
Sbjct: 327 KLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI 386
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ L L L + N + G F L ++ + +
Sbjct: 387 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHL 429
Score = 114 (45.2 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 44/186 (23%), Positives = 80/186 (43%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHV---DL 75
P++ S + + L +P + + +RL L+ N I + + L+H+ L
Sbjct: 29 PAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTD--FAGLRHLRVLQL 86
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
I G F+ ++L L+LN N + FP+ + R+++ +N+I I +
Sbjct: 87 MENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDL-SENQIQAIPRK 145
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F G ++ L LD N + + +F L L L + N T L+ +FN + +L
Sbjct: 146 AFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFR 205
Query: 194 LRGAGL 199
L L
Sbjct: 206 LHSNNL 211
Score = 101 (40.6 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 42/151 (27%), Positives = 68/151 (45%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSL---QHVDLSHTTWLIIPI 85
C+ Q+ L IP H L L+ N TV A I+ L + ++ S+ I
Sbjct: 521 CSNQK--LTKIPDHIPQYTAELRLNNNEF-TVLEATGIFKKLPQLRKINFSNNKITDIEE 577
Query: 86 GGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
G FE + E+ L N+ Q + + + + NRIS + F GL+++R+L
Sbjct: 578 GAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLL 637
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
L DNQ+ ++ +F L L+ L + N F
Sbjct: 638 SLYDNQITTIAPGAFDTLHSLSTLNLLANPF 668
Score = 84 (34.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L+S+P + + + T E L++ N + + F GL +L+ L++ + +T + +GAF D
Sbjct: 46 LRSVP-RNIPRNT--ERLDLNGNNITRITKTDFAGLRHLRVLQLM-ENKITTIERGAFQD 101
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAE 341
E +G LY L+L EN + +++ + +
Sbjct: 102 LKELERLRLNRNHLQL-FPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDY 160
Query: 342 NPIEC 346
N I C
Sbjct: 161 NHISC 165
Score = 81 (33.6 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 42/191 (21%), Positives = 76/191 (39%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN- 271
L ++V N+ + K + + + EL + N F+++ K LS K L + SN
Sbjct: 736 LDTVVRCSNKALKVLPKGIPR--DVTELYLDGNQFTLVP----KELSNYKHLTLIDLSNN 789
Query: 272 -LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
++ + +F++ I GL +L L+L N + E A
Sbjct: 790 RISTLSNQSFSNMTQLLTLILSYNRLRC-IPPRTFDGLKSLRLLSLHGNDISVVPEG--A 846
Query: 331 WPELRTID---IAENPIECGCNILWLREMLVR--RNTSAVFCNSPAPLKYKSLISLSAED 385
+ +L + I NP+ C CN+ WL + + + C P + K L++ ++
Sbjct: 847 FNDLAALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKK 906
Query: 386 LGCAGAGLTNI 396
C G NI
Sbjct: 907 FTCQGPVDVNI 917
Score = 77 (32.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 51/245 (20%), Positives = 100/245 (40%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
++RL L+ N ++ + + S L +DLS IP F + LQL++N H
Sbjct: 105 LERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYN-HI 163
Query: 106 PQQIVCSIISPRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
+ + R +E+ N I+R+ A F + LR L N L +++
Sbjct: 164 SCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDW 223
Query: 164 MLAELRVGLNVFTTLADGAFNG--LGRLSALDLRGAGLTNISDNAFR-GLSGLRSLVLTD 220
+ RVGL + G + + + +G T+ + A + + +
Sbjct: 224 LRQRPRVGLYT-QCMGPSHLRGHNVAEVQKREFVCSGGTSGKEPACQCSVLHCPAACTCS 282
Query: 221 NRLQSIPTKQLSKL-TRLEE----LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
N + K L+++ T L E + + QN ++ G F L+R++++ + ++ +
Sbjct: 283 NNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSN-NQISEL 341
Query: 276 RKGAF 280
AF
Sbjct: 342 APDAF 346
Score = 37 (18.1 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 531 IDIAENPIECGC 542
+D E ++CGC
Sbjct: 1516 VDEVEKVVKCGC 1527
Score = 37 (18.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 337 IDIAENPIECGC 348
+D E ++CGC
Sbjct: 1516 VDEVEKVVKCGC 1527
>UNIPROTKB|O75473 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G-protein
coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=TAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0005887
GO:GO:0004930 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0048839
GO:GO:0016500 InterPro:IPR026906 Pfam:PF13306 HOVERGEN:HBG031675
HOGENOM:HOG000231829 EMBL:AF062006 EMBL:AF061444 EMBL:AC078860
EMBL:AC090116 EMBL:BC096324 EMBL:BC096325 EMBL:BC096326
EMBL:BC099650 IPI:IPI00021131 IPI:IPI00940760 PIR:JE0176
RefSeq:NP_003658.1 UniGene:Hs.658889 ProteinModelPortal:O75473
SMR:O75473 STRING:O75473 PhosphoSite:O75473 PRIDE:O75473
Ensembl:ENST00000266674 Ensembl:ENST00000540815 GeneID:8549
KEGG:hsa:8549 UCSC:uc001swl.3 UCSC:uc001swm.3 CTD:8549
GeneCards:GC12P071833 HGNC:HGNC:4504 HPA:HPA012530 MIM:606667
neXtProt:NX_O75473 PharmGKB:PA28894 InParanoid:O75473 KO:K04308
OMA:FNPHFKE OrthoDB:EOG46143B PhylomeDB:O75473 GenomeRNAi:8549
NextBio:32032 ArrayExpress:O75473 Bgee:O75473 CleanEx:HS_LGR5
Genevestigator:O75473 GermOnline:ENSG00000139292 Uniprot:O75473
Length = 907
Score = 228 (85.3 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 91/346 (26%), Positives = 143/346 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ I + F GL +L++L L +NQLR VPT + L L LR+ N + + F+
Sbjct: 100 NALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPPSCFS 159
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L LT I AFR LS L+++ L N++ IP L+ L L +
Sbjct: 160 GLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHN 219
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N L CF GL L+ L++ +NL I E A
Sbjct: 220 NRIHSLGKKCFDGLHSLETLDLN-YNNLDEFPTAI--RTLSNLKELGFHSNNIRSIPEKA 276
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDI-AENPIECGCNILWLREMLVRRNT 362
VG P+L ++ +N S PELRT+ + + I ++ + T
Sbjct: 277 FVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGTANLESLTLT 336
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN--AFRGLSGLRSLVLTDNRLQSI 420
A + P + L +L DL N+ ++ +F L+ + L N + I
Sbjct: 337 GAQISSLPQTV-CNQLPNLQVLDLSY------NLLEDLPSFSVCQKLQKIDLRHNEIYEI 389
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
+L L L + N +++ F L L +L+++ SNL
Sbjct: 390 KVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLS--SNL 433
Score = 191 (72.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 90/376 (23%), Positives = 148/376 (39%)
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
+QL P PS L L ELR+ N T + GAF GL L L L+ L ++ A +
Sbjct: 79 SQLLPNPLPS---LRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQ 135
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
L L+SL L N + +P S L L L + N + + F+ LS L+ + +
Sbjct: 136 NLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLA- 194
Query: 269 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM 328
+ + + AF + + + GL +L L+L N F ++
Sbjct: 195 LNKIHHIPDYAFGNLSSLVVLHLHNNRIHS-LGKKCFDGLHSLETLDLNYNNLDEFPTAI 253
Query: 329 LAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV---FCNSPAPLKYKSLISLSAE- 384
L+ + N NI + E N S + F ++P +S E
Sbjct: 254 RTLSNLKELGFHSN------NIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPEL 307
Query: 385 -DLGCAGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
L GA +T D G + L SL LT ++ S+P ++L L+ L++ N
Sbjct: 308 RTLTLNGASQITEFPD--LTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLE 365
Query: 443 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGL 502
L + F L+++++ + + ++ F II +A L
Sbjct: 366 DLPS--FSVCQKLQKIDLRH-NEIYEIKVDTFQQLLSLRSLNLAWNKIA-IIHPNAFSTL 421
Query: 503 PNLYHLNLKENAFTSF 518
P+L L+L N +SF
Sbjct: 422 PSLIKLDLSSNLLSSF 437
Score = 176 (67.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 107/430 (24%), Positives = 172/430 (40%)
Query: 42 HSNPSIQRLVLSTNRIKTVDSAIPIYLSL--QHVDLS-HTTWLIIPIGGFEPQEKLVELQ 98
H P R++L + S +P LS+ ++DLS + ++P L EL+
Sbjct: 39 HCEPD-GRMLLRVDCSDLGLSELPSNLSVFTSYLDLSMNNISQLLP-NPLPSLRFLEELR 96
Query: 99 LNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 156
L N + P+ + S +V + N++ + + L +L+ L LD N + VP
Sbjct: 97 LAGNALTYIPKGAFTGLYS-LKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISYVPP 155
Query: 157 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSL 216
F L L L + N T + AF L L A+ L + +I D AF LS L L
Sbjct: 156 SCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVL 215
Query: 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 276
L +NR+ S+ K L LE L++ N + LS LK L ++N+ +
Sbjct: 216 HLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTA-IRTLSNLKELGFH-SNNIRSIP 273
Query: 277 KGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRT 336
+ AF + A LP L L L N + +E +P+L
Sbjct: 274 EKAFVGNPSLITIHFYDNPIQF-VGRSAFQHLPELRTLTL--NGASQITE----FPDLTG 326
Query: 337 IDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA----EDLGCAGAG 392
E+ G I L + + + + + L + L S S + +
Sbjct: 327 TANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNL-LEDLPSFSVCQKLQKIDLRHNE 385
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
+ I + F+ L LRSL L N++ I S L L +L++ N +L + GL
Sbjct: 386 IYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSN---LLSSFPITGL 442
Query: 453 SYLKRLEITG 462
L L++TG
Sbjct: 443 HGLTHLKLTG 452
Score = 151 (58.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 72/299 (24%), Positives = 126/299 (42%)
Query: 46 SIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
++Q + L+ N+I + D A SL + L + + F+ L L LN+N
Sbjct: 187 ALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 246
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
FP I +S + F N I I + F G +L ++ DN ++ V +F +L
Sbjct: 247 DEFPTAI--RTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHL 304
Query: 163 GMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L + G + T D G L +L L GA ++++ L L+ L L+ N
Sbjct: 305 PELRTLTLNGASQITEFPD--LTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYN 362
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L+ +P+ S +L+++++ N ++ F+ L L+ L + + + + AF+
Sbjct: 363 LLEDLPS--FSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAW-NKIAIIHPNAFS 419
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN-AFTSFSESMLAWPELRTIDI 339
+ + GL L HL L N A S S +PEL+ I++
Sbjct: 420 ----TLPSLIKLDLSSNLLSSFPITGLHGLTHLKLTGNHALQSLISSE-NFPELKVIEM 473
Score = 149 (57.5 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 46/157 (29%), Positives = 69/157 (43%)
Query: 384 EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 443
E+L AG LT I AF GL L+ L+L +N+L+ +PT+ L L L+ L + N S
Sbjct: 93 EELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLRLDANHISY 152
Query: 444 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLP 503
+ CF GL L+ L + + LT + AF I + A L
Sbjct: 153 VPPSCFSGLHSLRHLWLDDNA-LTEIPVQAFRSLSALQAMTLALNKIHHI-PDYAFGNLS 210
Query: 504 NLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIE 539
+L L+L N S + L T+D+ N ++
Sbjct: 211 SLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLD 247
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 218 (81.8 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 80/308 (25%), Positives = 124/308 (40%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIIS-PRRVEIFGQN-RI 127
LQHV IP + KL+ LQ N+ FP S + P V + Q+ +I
Sbjct: 33 LQHVICDKVGLQKIP--KVSEKTKLLNLQRNN---FPVLAANSFRAMPNLVSLHLQHCQI 87
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
+ F GL L LYL N +R + +F L L L + N T L G + L
Sbjct: 88 REVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLV 147
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L L L + + AF+G LR L L++N L S+ L + L + + +N
Sbjct: 148 NLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQL 207
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
S + L ++ L+++ + L + AF +GA +G
Sbjct: 208 SSYPSAALSKLRVVEELKLSH-NPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLG 266
Query: 308 LPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREML-VRRNTSAVF 366
+ L H++L+ N S + L T+ + NP +C C + LR L + +
Sbjct: 267 VTTLKHVHLENNRLNQLP-SNFPFDSLETLALTNNPWKCTCQLRGLRRWLEAKASRPDAT 325
Query: 367 CNSPAPLK 374
C SPA K
Sbjct: 326 CASPAKFK 333
Score = 171 (65.3 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 60/224 (26%), Positives = 100/224 (44%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLII 83
S +LQ + + + + +++L+ LS N I+ + + A L ++ L H +
Sbjct: 79 SLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTEL 138
Query: 84 PIGGFEPQEKLVELQLNHNKHFPQQI-VCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
P G P L LQLN+NK + R +N +S + + + L
Sbjct: 139 PRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLA 198
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTN 201
++D NQL S P+ + L ++ EL++ N ++ D AF GR L L L L
Sbjct: 199 KFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEK 258
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
SD AF G++ L+ + L +NRL +P+ LE L + N
Sbjct: 259 FSDGAFLGVTTLKHVHLENNRLNQLPSN--FPFDSLETLALTNN 300
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 60/237 (25%), Positives = 108/237 (45%)
Query: 21 RFSTRDPSCNLQEANLDVIPSHS---NPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLS 76
+ S + NLQ N V+ ++S P++ L L +I+ V + A L ++ LS
Sbjct: 48 KVSEKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLS 107
Query: 77 HTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQAC 134
H ++ G F+ +L L L+HNK P+ ++ +++ +++ N+I +
Sbjct: 108 HNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQL-NNNKIRELRAGA 166
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F+G LR LYL +N L S+ + + LA+ V N ++ A + L + L L
Sbjct: 167 FQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKL 226
Query: 195 RGAGLTNISDNAFRGLSG-LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L +I DNAF+ L +L L + L+ +T L+ + + N + L
Sbjct: 227 SHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQL 283
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 40/170 (23%), Positives = 69/170 (40%)
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
AF+G LR L L++N L S+ L + L + + +N S + L ++ L+
Sbjct: 166 AFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELK 225
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
++ + L + AF + A +G+ L H++L+ N
Sbjct: 226 LSH-NPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQLP 284
Query: 520 ESMLAWPELRTIDIAENPIECGCNILWLREML-VRRNTSAVFCNSPAPLK 568
S + L T+ + NP +C C + LR L + + C SPA K
Sbjct: 285 -SNFPFDSLETLALTNNPWKCTCQLRGLRRWLEAKASRPDATCASPAKFK 333
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 48/218 (22%), Positives = 92/218 (42%)
Query: 51 VLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQI 109
VL+ N + + + + ++L QH + + G F ++L+ L L+HN +
Sbjct: 65 VLAANSFRAMPNLVSLHL--QHCQIRE-----VAAGAFRGLKQLIYLYLSHNDIRVLRAG 117
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
++ N+++ + + L L IL L++N++R + +F L L
Sbjct: 118 AFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLY 177
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+ N ++L GA + + L+ + L++ A L + L L+ N L+SIP
Sbjct: 178 LSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDN 237
Query: 230 QLSKLTR-LEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
R LE L + G F G++ LK + +
Sbjct: 238 AFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHL 275
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 219 (82.2 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 60/167 (35%), Positives = 90/167 (53%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N I I+ F GL L L L DN+L ++P +F+YL L EL + N
Sbjct: 77 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNP 136
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
++ AFN + L LDL L+ IS+ AF GLS LR L L L+ IP L+
Sbjct: 137 IESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 194
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
L +L+EL++ N + + G F+GL +L++L + S + + + AF
Sbjct: 195 LVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMI-QSQIQVIERNAF 240
Score = 207 (77.9 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 76/270 (28%), Positives = 114/270 (42%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 62 ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 121
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL I L+ L L +
Sbjct: 122 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 181
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
++ E L L L+++G ++LT +R G+F IE
Sbjct: 182 AM--CNLREIPNLTPLVKLDELDLSG-NHLTAIRPGSF-QGLMHLQKLWMIQSQIQVIER 237
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRR-- 360
A L +L +NL N T + L I + NP C C+ILWL + +
Sbjct: 238 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHNPWNCNCDILWLSWWIKDKAP 297
Query: 361 -NTSAVF-CNSPAPLKYKSLISLSAEDLGC 388
NT+ C++P LK + + L C
Sbjct: 298 SNTACCARCHTPPSLKGRYIGELDLNYFTC 327
Score = 202 (76.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 73/233 (31%), Positives = 105/233 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NL E + +I +S ++ L LS N I+T++ A +L ++
Sbjct: 48 PDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 107
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G F KL EL L +N + P I S RR+++ R+S I +
Sbjct: 108 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 167
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
FEGL+ LR L L LR +P + L L EL + N T + G+F GL L L
Sbjct: 168 GAFEGLSNLRYLNLAMCNLREIP--NLTPLVKLDELDLSGNHLTAIRPGSFQGLMHLQKL 225
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ + + I NAF L L + L N L +P + L RLE + + N
Sbjct: 226 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL-RLERIHLHHN 277
Score = 193 (73.0 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 136 EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ T R+L L +NQ++ + SF +L L L++ N T+ GAFNGL L+ L+L
Sbjct: 49 DGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 108
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAG 253
LT I + AF LS L+ L L +N ++SIP+ +++ L L++G+ S + G
Sbjct: 109 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 168
Query: 254 CFKGLSYLKRLEITGASNLTRV 275
F+GLS L+ L + NL +
Sbjct: 169 AFEGLSNLRYLNLA-MCNLREI 189
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 56/218 (25%), Positives = 89/218 (40%)
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD- 414
L NT +F N + + + LS ++L + +I AF + LR L L +
Sbjct: 100 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 159
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL I L+ L L + ++ E L L L+++G ++LT +R G+F
Sbjct: 160 KRLSYISEGAFEGLSNLRYLNLAM--CNLREIPNLTPLVKLDELDLSG-NHLTAIRPGSF 216
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIA 534
+IE +A L +L +NL N T + L I +
Sbjct: 217 -QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLH 275
Query: 535 ENPIECGCNILWLREMLVRR---NTSAVF-CNSPAPLK 568
NP C C+ILWL + + NT+ C++P LK
Sbjct: 276 HNPWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLK 313
>UNIPROTKB|Q14392 [details] [associations]
symbol:LRRC32 "Leucine-rich repeat-containing protein 32"
species:9606 "Homo sapiens" [GO:0010628 "positive regulation of
gene expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005887 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0046007 GO:GO:0050710 EMBL:Z24680
EMBL:BC052210 EMBL:BC070079 IPI:IPI00030280 PIR:S42799
RefSeq:NP_001122394.1 RefSeq:NP_005503.1 UniGene:Hs.151641
ProteinModelPortal:Q14392 SMR:Q14392 DIP:DIP-48932N STRING:Q14392
PhosphoSite:Q14392 DMDM:2498405 PaxDb:Q14392 PRIDE:Q14392
Ensembl:ENST00000260061 Ensembl:ENST00000404995
Ensembl:ENST00000407242 GeneID:2615 KEGG:hsa:2615 UCSC:uc001oxq.4
CTD:2615 GeneCards:GC11M076368 H-InvDB:HIX0036396 HGNC:HGNC:4161
MIM:137207 neXtProt:NX_Q14392 PharmGKB:PA28574 HOGENOM:HOG000113368
HOVERGEN:HBG052348 InParanoid:Q14392 OMA:CCGNGWL OrthoDB:EOG4DBTF0
PhylomeDB:Q14392 ChiTaRS:LRRC32 GenomeRNAi:2615 NextBio:10297
ArrayExpress:Q14392 Bgee:Q14392 CleanEx:HS_LRRC32
Genevestigator:Q14392 GermOnline:ENSG00000137507 Uniprot:Q14392
Length = 662
Score = 223 (83.6 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 141/549 (25%), Positives = 216/549 (39%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSH 77
P + + SC Q L +PS P + L LS N+++++ S + Y +L+H+DLS
Sbjct: 25 PCKMVDKKVSC--QVLGLLQVPSVLPPDTETLDLSGNQLRSILASPLGFYTALRHLDLST 82
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPR-RV---EIFGQNRISRIDQ 132
+ G F+ L L L HN+ + + P RV ++ G + S + +
Sbjct: 83 NEISFLQPGAFQALTHLEHLSLAHNRLAMATALSAGGLGPLPRVTSLDLSGNSLYSGLLE 142
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
+L L L +N L + +F + L +L + NV + DGAF GL RL+ L
Sbjct: 143 RLLGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHL 202
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT-KQLSKLTRLEELEIGQNGFSMLE 251
+L LT ISD F L LR L L+ N +++ T Q +L L++ +N +L
Sbjct: 203 NLSRNSLTCISD--F-SLQQLRVLDLSCNSIEAFQTASQPQAEFQLTWLDLREN--KLLH 257
Query: 252 AGCFKGLSYLKRLEITGASN-LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP- 309
F L+ L RL SN L R+ G D G G P
Sbjct: 258 ---FPDLAALPRLIYLNLSNNLIRLPTGPPQDSKGIHAPSEGWSALPLSAPSGNASGRPL 314
Query: 310 -NLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L +L+L N +S L L ++++ N C LR RR ++ C
Sbjct: 315 SQLLNLDLSYNEIELIPDSFLEHLTSLCFLNLSRN---C------LRTFEARR-LGSLPC 364
Query: 368 NSPAPLKYKSL--ISLSAEDLGCA------GAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
L + +L + L A LG G L ++ F L+ L+ L L NR+
Sbjct: 365 LMLLDLSHNALETLELGARALGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSP 424
Query: 420 I--PTKQ-------LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 470
P + S +T L L + N +L AG F L L+++ L V
Sbjct: 425 CGGPDEPGPSGCVAFSGITSLRSLSLVDNEIELLRAGAFLHTP-LTELDLSSNPGL-EVA 482
Query: 471 KGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPE--- 527
GA +++ D L L LNL EN + AW +
Sbjct: 483 TGALGGLEASLEVLALQGNGLMVLQVD-LPCFICLKRLNLAENRLSHLP----AWTQAVS 537
Query: 528 LRTIDIAEN 536
L +D+ N
Sbjct: 538 LEVLDLRNN 546
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 103/437 (23%), Positives = 171/437 (39%)
Query: 45 PSIQRLVLSTNRI-KTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
PS+ L L+ N + + +L+ +DL + I G FE +L L L+ N
Sbjct: 149 PSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHLNLSRNS 208
Query: 104 HFPQQIVC-SIISPRRVEIFGQ--NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
+ C S S +++ + N I Q + ++ +LD + + + P
Sbjct: 209 -----LTCISDFSLQQLRVLDLSCNSIEAF-QTASQPQAEFQLTWLDLRENKLLHFPDLA 262
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA-GLTNISDNAF-RGLSGLRSLVL 218
L L L + N+ + G + + A L+ S NA R LS L +L L
Sbjct: 263 ALPRLIYLNLSNNLIRLPTGPPQDSKGIHAPSEGWSALPLSAPSGNASGRPLSQLLNLDL 322
Query: 219 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
+ N ++ IP L LT L L + +N EA L L L+++ + L + G
Sbjct: 323 SYNEIELIPDSFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLSHNA-LETLELG 381
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-------ESMLAW 331
A A + L +L LNL+ N + +A+
Sbjct: 382 ARA--LGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCGGPDEPGPSGCVAF 439
Query: 332 P---ELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA--EDL 386
LR++ + +N IE +L L + S+ N + +L L A E L
Sbjct: 440 SGITSLRSLSLVDNEIELLRAGAFLHTPLTELDLSS---NPGLEVATGALGGLEASLEVL 496
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 446
G GL + + + L+ L L +NRL +P ++ LE L++ N FS+L
Sbjct: 497 ALQGNGLMVLQVDLPCFIC-LKRLNLAENRLSHLPA--WTQAVSLEVLDLRNNSFSLLPG 553
Query: 447 GCFKGL-SYLKRLEITG 462
GL + L+RL + G
Sbjct: 554 SAMGGLETSLRRLYLQG 570
>ZFIN|ZDB-GENE-080327-14 [details] [associations]
symbol:lrrtm4l2 "leucine rich repeat transmembrane
neuronal 4 like 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-14 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042802
InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG052362 EMBL:CU468765
IPI:IPI00876678 UniGene:Dr.110767 IntAct:A8BB35 STRING:A8BB35
Uniprot:A8BB35
Length = 445
Score = 219 (82.2 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 72/255 (28%), Positives = 114/255 (44%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N IS +D+ F+GL L+ L L N++ + +F + L L + N L G F+
Sbjct: 91 NSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFH 150
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL +L L LR + +I F L L L NRL++I L RL EL +
Sbjct: 151 GLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEH 210
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N FS + F L L+ L + + + V +G+ ++
Sbjct: 211 NQFSRINFFLFPRLLNLQALYLQW-NRIRTVVQGS-PWTWHTLQKLDLSGNEIQILDPAI 268
Query: 305 LVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNIL----WLREMLVR 359
LPNL+ LNL+ N ++ S E + +W + TI++A N +C +I WLR
Sbjct: 269 FRCLPNLHTLNLESNKISNVSLEVVSSWISISTINLAGNIWDCSSSICPLVSWLRNFRGT 328
Query: 360 RNTSAVFCNSPAPLK 374
R+ S + C++P L+
Sbjct: 329 RDAS-IICSTPKSLQ 342
Score = 145 (56.1 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 42/132 (31%), Positives = 61/132 (46%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F L L LYLD N + +V +F L L EL + N L +G F + L LDL
Sbjct: 77 FAHLNQLVWLYLDHNSISTVDRLAFQGLRRLKELILSSNKIAQLQNGTFETVPNLRNLDL 136
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
+ ++ F GL L++L L N ++SIP + + LE L++G N +
Sbjct: 137 SYNQMQDLVPGHFHGLRKLQNLHLRSNNIRSIPVRTFMECRSLEFLDLGYNRLRTITRTT 196
Query: 255 FKGLSYLKRLEI 266
F GL L L +
Sbjct: 197 FLGLLRLTELHL 208
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 52/202 (25%), Positives = 89/202 (44%)
Query: 47 IQRLVLSTNRIKTVDSA-IPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
++ L+LS+N+I + + +L+++DLS+ + G F KL L L N +
Sbjct: 107 LKELILSSNKIAQLQNGTFETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLRSN-NI 165
Query: 106 PQQIVCSIISPRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
V + + R +E G NR+ I + F GL L L+L+ NQ + F L
Sbjct: 166 RSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPRLL 225
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + N T+ G+ L LDL G + + FR L L +L L N++
Sbjct: 226 NLQALYLQWNRIRTVVQGSPWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLESNKI 285
Query: 224 QSIPTKQLSKLTRLEELEIGQN 245
++ + +S + + + N
Sbjct: 286 SNVSLEVVSSWISISTINLAGN 307
Score = 128 (50.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 51/182 (28%), Positives = 79/182 (43%)
Query: 395 NISDNAFRGLSGLRSLVLTD---NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
NI R RSL D NRL++I L RL EL + N FS + F
Sbjct: 164 NIRSIPVRTFMECRSLEFLDLGYNRLRTITRTTFLGLLRLTELHLEHNQFSRINFFLFPR 223
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLK 511
L L+ L + + + V +G+ I++ LPNL+ LNL+
Sbjct: 224 LLNLQALYLQW-NRIRTVVQGS-PWTWHTLQKLDLSGNEIQILDPAIFRCLPNLHTLNLE 281
Query: 512 ENAFTSFS-ESMLAWPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAP 566
N ++ S E + +W + TI++A N +C +I WLR R+ S + C++P
Sbjct: 282 SNKISNVSLEVVSSWISISTINLAGNIWDCSSSICPLVSWLRNFRGTRDAS-IICSTPKS 340
Query: 567 LK 568
L+
Sbjct: 341 LQ 342
Score = 83 (34.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 34/146 (23%), Positives = 59/146 (40%)
Query: 198 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 257
G ++ +N G GL L N L + Q + L +L L + N S ++ F+G
Sbjct: 47 GFQDVPENISLGCQGLS---LRYNSLLLLLPYQFAHLNQLVWLYLDHNSISTVDRLAFQG 103
Query: 258 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLK 317
L LK L I ++ + +++ G F + + G GL L +L+L+
Sbjct: 104 LRRLKEL-ILSSNKIAQLQNGTF-ETVPNLRNLDLSYNQMQDLVPGHFHGLRKLQNLHLR 161
Query: 318 ENAFTSFS-ESMLAWPELRTIDIAEN 342
N S + + L +D+ N
Sbjct: 162 SNNIRSIPVRTFMECRSLEFLDLGYN 187
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 222 (83.2 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 85/291 (29%), Positives = 136/291 (46%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N I I+ F GLT+L L L DN+L ++P +F YL L EL + N
Sbjct: 101 RHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNP 160
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
++ AF+ L L LDL L+ IS AF+GLS LR L L L+ +P Q
Sbjct: 161 IESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPNIQ--P 218
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXX 293
L RL+ELE+ N ++++ FKGL +L++L + A T + + +F D
Sbjct: 219 LIRLDELEMSGNQLTVIQPSSFKGLVHLQKLWMMHAQVQT-IERNSF-DDLHSLRELNLA 276
Query: 294 XXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM-LAWPELRTIDIAENPIECG-CNIL 351
+ L +L ++L N + + + L+W LR + N C CN
Sbjct: 277 HNNLTFLPHDLYTPLHHLQRVHLHHNPWNCNCDILWLSW-WLRET-VPTNTSCCARCNSP 334
Query: 352 -WLREMLVRRNTSAVF-CNSPAPLKYKSLISLS---AEDLGCAGAGLTNIS 397
L+ + + F C +P ++ ++L+ A +L C +T++S
Sbjct: 335 PSLKGRYIGELDQSYFQCYAPVIIEPPVDLNLTEGMAAELKCRTNSVTSVS 385
Score = 217 (81.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 84/271 (30%), Positives = 118/271 (43%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N+I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 87 NQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFE 146
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIG 243
L +L L LR + +I +AF L LR L L + RL I + L+ L L +G
Sbjct: 147 YLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNLG 206
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
++ E + L L LE++G + LT ++ +F IE
Sbjct: 207 M--CNLKEVPNIQPLIRLDELEMSG-NQLTVIQPSSFKGLVHLQKLWMMHAQVQT-IERN 262
Query: 304 ALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWLREML---V 358
+ L +L LNL N T F L P L+ + + NP C C+ILWL L V
Sbjct: 263 SFDDLHSLRELNLAHNNLT-FLPHDLYTPLHHLQRVHLHHNPWNCNCDILWLSWWLRETV 321
Query: 359 RRNTSAVF-CNSPAPLKYKSLISLSAEDLGC 388
NTS CNSP LK + + L C
Sbjct: 322 PTNTSCCARCNSPPSLKGRYIGELDQSYFQC 352
Score = 205 (77.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 53/138 (38%), Positives = 77/138 (55%)
Query: 139 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198
T R L L DNQ++ + SF +L L L++ N + GAFNGL L+ L+L
Sbjct: 77 TNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNR 136
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKG 257
LT I + AF LS L+ L L +N ++SIP+ S+L L L++G+ S + +G F+G
Sbjct: 137 LTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQG 196
Query: 258 LSYLKRLEITGASNLTRV 275
LS L+ L + G NL V
Sbjct: 197 LSNLRYLNL-GMCNLKEV 213
Score = 205 (77.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 72/233 (30%), Positives = 103/233 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NLQ+ + VI S ++ L LS N I+ ++ A SL ++
Sbjct: 72 PDGVSTNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGAFNGLTSLNTLE 131
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G FE KL EL L +N + P + S RR+++ R+S I
Sbjct: 132 LFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISS 191
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
F+GL+ LR L L L+ VP + L L EL + N T + +F GL L L
Sbjct: 192 GAFQGLSNLRYLNLGMCNLKEVP--NIQPLIRLDELEMSGNQLTVIQPSSFKGLVHLQKL 249
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ A + I N+F L LR L L N L +P + L L+ + + N
Sbjct: 250 WMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHLQRVHLHHN 302
Score = 149 (57.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 75/269 (27%), Positives = 111/269 (41%)
Query: 310 NLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNI-LWLREMLVRRNTSAVFC 367
N +LNL++N +S L + ++ N I NI + L NT +F
Sbjct: 78 NTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIR---NIEIGAFNGLTSLNTLELFD 134
Query: 368 NSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQL 425
N + + LS ++L + +I +AF L LR L L + RL I +
Sbjct: 135 NRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAF 194
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
L+ L L +G ++ E + L L LE++G + LT ++ +F
Sbjct: 195 QGLSNLRYLNLGM--CNLKEVPNIQPLIRLDELEMSG-NQLTVIQPSSFKGLVHLQKLWM 251
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCN 543
I E ++ L +L LNL N T F L P L+ + + NP C C+
Sbjct: 252 MHAQVQTI-ERNSFDDLHSLRELNLAHNNLT-FLPHDLYTPLHHLQRVHLHHNPWNCNCD 309
Query: 544 ILWLREML---VRRNTSAVF-CNSPAPLK 568
ILWL L V NTS CNSP LK
Sbjct: 310 ILWLSWWLRETVPTNTSCCARCNSPPSLK 338
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 58/246 (23%), Positives = 105/246 (42%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
++ T L+ +P +S TR L + N +++ FK L +L+ L+++ +++ +
Sbjct: 61 VICTRRGLKDVPDG-VSTNTRY--LNLQDNQIQVIKVDSFKHLRHLEILQLS-RNHIRNI 116
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA L L L L+ N S S++ P L
Sbjct: 117 EIGAF-NGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSL 175
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
R +D+ E + + + R + CN + LI L ++L +G LT
Sbjct: 176 RRLDLGELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPNIQPLIRL--DELEMSGNQLT 233
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I ++F+GL L+ L + ++Q+I L L EL + N + L + L +
Sbjct: 234 VIQPSSFKGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHH 293
Query: 455 LKRLEI 460
L+R+ +
Sbjct: 294 LQRVHL 299
Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
Identities = 42/135 (31%), Positives = 59/135 (43%)
Query: 388 CAGAGLTNISDNAFRGLS-GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 446
C GL ++ D G+S R L L DN++Q I L LE L++ +N +E
Sbjct: 63 CTRRGLKDVPD----GVSTNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEI 118
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
G F GL+ L LE+ + LT + GAF + I DA LP+L
Sbjct: 119 GAFNGLTSLNTLELFD-NRLTTIPNGAF-EYLSKLKELWLRNNPIESIPSDAFSRLPSLR 176
Query: 507 HLNLKENAFTSFSES 521
L+L E S+ S
Sbjct: 177 RLDLGELKRLSYISS 191
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 224 (83.9 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 98/373 (26%), Positives = 165/373 (44%)
Query: 111 CSIISPRRVEIFGQNRISRIDQACFEGLTAL-RILYLDDNQLRSVPTPSFIYLGMLAELR 169
CS RRV+ G+ ++ + EGL+A + L L N L + + L L L
Sbjct: 33 CSCDGDRRVDCSGKG-LTAVP----EGLSAFTQALQLAGNDLSFIHPKALSGLKELKVLT 87
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+ N T+ A GL L +L L +T++ +++F GL LR L L DN L +P
Sbjct: 88 LQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVH 147
Query: 230 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 289
LS L L+ L + N S + F LS L L + + + + + F D
Sbjct: 148 PLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHN-NKIRSLSQHCF-DGLDNLET 205
Query: 290 XXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGC 348
+ A+ LP+L L N+ + + P LRTI + +NP+
Sbjct: 206 LDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVG 264
Query: 349 NILW--LREM--LVRRNTSAVFCNSPAPLKYKSLI-SLSAEDLGCAGAGLTNISDNAFRG 403
N + L ++ LV R S V ++ +L ++ E L G +++I +N +
Sbjct: 265 NSAFHNLSDLHSLVIRGASMV-------QQFPNLTGTVHLESLTLTGTKISSIPNNLCQE 317
Query: 404 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 463
LR+L L+ N ++ +P+ + LEE+ + +N ++ G F+GL L+ L+++
Sbjct: 318 QKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLS-- 373
Query: 464 SNLTR-VRKGAFA 475
NL + AFA
Sbjct: 374 RNLIHEIHSRAFA 386
Score = 195 (73.7 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 83/340 (24%), Positives = 140/340 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N +S I GL L++L L +NQL++VP+ + L L LR+ N T++ + +F
Sbjct: 67 NDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFE 126
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL +L L L LT + + L L++L L N++ SIP + L+ L L +
Sbjct: 127 GLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHN 186
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N L CF GL L+ L++ +NL + A I +GA
Sbjct: 187 NKIRSLSQHCFDGLDNLETLDLN-YNNLGEFPQAIKA--LPSLKELGFHSNSISVIPDGA 243
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDI-AENPIECGCNILWLREMLVRRNT 362
G P L ++L +N + S +L ++ I + ++ N+ + T
Sbjct: 244 FDGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLT 303
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISD-NAFRGLSGLRSLVLTDNRLQSIP 421
+ P L + + L DL NI D +F G L + L N++ I
Sbjct: 304 GTKISSIPNNLCQEQKM-LRTLDLS-----YNNIRDLPSFNGCHALEEISLQRNQIYQIK 357
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
L L L++ +N + + F L + L+++
Sbjct: 358 EGTFQGLISLRILDLSRNLIHEIHSRAFATLGPITNLDVS 397
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 76/260 (29%), Positives = 124/260 (47%)
Query: 31 LQEANLDVIPSH--SN-PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIG 86
L + +L +P H SN P++Q L L+ N+I ++ D A SL + L + +
Sbjct: 136 LDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQH 195
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEI-FGQNRISRIDQACFEGLTALRI 143
F+ + L L LN+N FPQ I P E+ F N IS I F+G LR
Sbjct: 196 CFDGLDNLETLDLNYNNLGEFPQAIKAL---PSLKELGFHSNSISVIPDGAFDGNPLLRT 252
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
++L DN L V +F L L L + G ++ + G L +L L G +++I
Sbjct: 253 IHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPN--LTGTVHLESLTLTGTKISSI 310
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+N + LR+L L+ N ++ +P+ + LEE+ + +N ++ G F+GL L+
Sbjct: 311 PNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQGLISLR 368
Query: 263 RLEITGASNLTR-VRKGAFA 281
L+++ NL + AFA
Sbjct: 369 ILDLS--RNLIHEIHSRAFA 386
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 66/225 (29%), Positives = 102/225 (45%)
Query: 50 LVLSTNRIKTVDS-AIPIYLSLQ--HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--H 104
L L N++KTV S AI +LQ +D +H T +P FE +L L L+ N
Sbjct: 86 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT--SVPEDSFEGLVQLRHLWLDDNSLTE 143
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
P + ++ + + + + N+IS I F L++L +L+L +N++RS+ F L
Sbjct: 144 VPVHPLSNLPTLQALTL-ALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDN 202
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N A L L L ++ I D AF G LR++ L DN L
Sbjct: 203 LETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 261
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITG 268
+ L+ L L I G SM++ G +L+ L +TG
Sbjct: 262 FVGNSAFHNLSDLHSLVI--RGASMVQQFPNLTGTVHLESLTLTG 304
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 224 (83.9 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 91/392 (23%), Positives = 156/392 (39%)
Query: 71 QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRI 130
+ VD S +P G + +++ +N+ P+ S +++ G N +S I
Sbjct: 39 RRVDCSGKGLTAVP-EGLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAG-NDLSLI 96
Query: 131 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 190
GL L++L L +NQLR+VP+ + L L LR+ N T++ + +F GL +L
Sbjct: 97 HPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLR 156
Query: 191 ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L L LT + L L++L L N + SIP + L+ L L + N L
Sbjct: 157 HLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSL 216
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
CF GL L+ L++ + L + A I +GA G P
Sbjct: 217 SQHCFDGLDNLETLDLN-YNYLDEFPQAIKA--LPSLKELGFHSNSISVIPDGAFGGNPL 273
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP 370
L ++L +N + S A+ L D+ I + W + + ++
Sbjct: 274 LRTIHLYDNPLSFVGNS--AFHNLS--DLHCLVIRGASLVQWFPNLTGTVHLESLTLTGT 329
Query: 371 APLKYKSLISLSAEDLGCAGAGLTNISD-NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
+ + + L NI D +F G L + L N++ I LT
Sbjct: 330 KISSIPDDLCQNQKMLRTLDLSYNNIRDLPSFNGCRALEEISLQRNQISLIKENTFQGLT 389
Query: 430 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
L L++ +N + +G F L + L+++
Sbjct: 390 SLRILDLSRNLIREIHSGAFAKLGTITNLDVS 421
Score = 210 (79.0 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 99/405 (24%), Positives = 174/405 (42%)
Query: 62 SAIPIYLSL--QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
+A+P LS Q +D+S +P F+ L ELQL N S + +
Sbjct: 49 TAVPEGLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELK 108
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
V N++ + GL+AL+ L LD N + SVP SF L L L + N T +
Sbjct: 109 VLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEV 168
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
+ L L AL L +++I D AF LS L L L +N+++S+ L LE
Sbjct: 169 PVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLE 228
Query: 239 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
L++ N K L LK L +++++ + GAF
Sbjct: 229 TLDLNYNYLDEFPQA-IKALPSLKELGFH-SNSISVIPDGAFGGNPLLRTIHLYDNPLSF 286
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+ A L +L+ L ++ + + ++ L ++ + I + L + ++
Sbjct: 287 -VGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKML 345
Query: 359 RRNTSAVFCNSPAPL-KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL 417
R T + N+ L + +L E++ ++ I +N F+GL+ LR L L+ N +
Sbjct: 346 R--TLDLSYNNIRDLPSFNGCRAL--EEISLQRNQISLIKENTFQGLTSLRILDLSRNLI 401
Query: 418 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
+ I + +KL + L++ F+ L + +GL+ L +L++ G
Sbjct: 402 REIHSGAFAKLGTITNLDVS---FNELTSFPTEGLNGLNQLKLVG 443
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 46/150 (30%), Positives = 72/150 (48%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRI 127
L+ + L+ T IP + Q+ L L L++N + P C + ++ +N+I
Sbjct: 321 LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPSFNGCRALEEISLQ---RNQI 377
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
S I + F+GLT+LRIL L N +R + + +F LG + L V N T+ NGL
Sbjct: 378 SLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLN 437
Query: 188 RLSALDLRGAGLTNISDN-AFRGLSGLRSL 216
+L + G + D A R + LRSL
Sbjct: 438 QLKLV-----GNFKLKDALAARDFANLRSL 462
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 55/230 (23%), Positives = 96/230 (41%)
Query: 314 LNLKENAFTSFSESML-AWPELRTIDIAENPIEC--GCNILWLREMLVRRNTSAVFCNSP 370
L++ N T E ++P L + +A N + + L+E+ V + P
Sbjct: 62 LDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVP 121
Query: 371 APLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
+ +++ LSA + L +T++ +++F GL LR L L DN L +P + LS L
Sbjct: 122 S----EAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLP 177
Query: 430 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXX 489
L+ L + N S + F LS L L + + + + + F D
Sbjct: 178 TLQALTLALNNISSIPDFAFTNLSSLVVLHLHN-NKIKSLSQHCF-DGLDNLETLDLNYN 235
Query: 490 XXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPI 538
+ A+ LP+L L N+ + + P LRTI + +NP+
Sbjct: 236 YLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPL 284
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00047
Identities = 65/276 (23%), Positives = 101/276 (36%)
Query: 192 LDLRGAGLTNISDNAFRGLSGL-RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
+D G GLT + + GLS ++L ++ N + +P LEEL++ N S++
Sbjct: 41 VDCSGKGLTAVPE----GLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLI 96
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
GL LK L + +N R + E + GL
Sbjct: 97 HPKALSGLKELKVLTLQ--NNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQ 154
Query: 311 LYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLR-EMLVRRNTSAVFCN 368
L HL L +N+ T L+ P L+ + +A N I + + LV +
Sbjct: 155 LRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIK 214
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
S + + L +L DL + A + L L+ L N + IP
Sbjct: 215 SLSQHCFDGLDNLETLDLNY---NYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGN 271
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 464
L + + N S + F LS L L I GAS
Sbjct: 272 PLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGAS 307
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 224 (83.9 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 91/392 (23%), Positives = 156/392 (39%)
Query: 71 QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRI 130
+ VD S +P G + +++ +N+ P+ S +++ G N +S I
Sbjct: 39 RRVDCSGKGLTAVP-EGLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAG-NDLSLI 96
Query: 131 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 190
GL L++L L +NQLR+VP+ + L L LR+ N T++ + +F GL +L
Sbjct: 97 HPKALSGLKELKVLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLR 156
Query: 191 ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L L LT + L L++L L N + SIP + L+ L L + N L
Sbjct: 157 HLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSL 216
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
CF GL L+ L++ + L + A I +GA G P
Sbjct: 217 SQHCFDGLDNLETLDLN-YNYLDEFPQAIKA--LPSLKELGFHSNSISVIPDGAFGGNPL 273
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP 370
L ++L +N + S A+ L D+ I + W + + ++
Sbjct: 274 LRTIHLYDNPLSFVGNS--AFHNLS--DLHCLVIRGASLVQWFPNLTGTVHLESLTLTGT 329
Query: 371 APLKYKSLISLSAEDLGCAGAGLTNISD-NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
+ + + L NI D +F G L + L N++ I LT
Sbjct: 330 KISSIPDDLCQNQKMLRTLDLSYNNIRDLPSFNGCRALEEISLQRNQISLIKENTFQGLT 389
Query: 430 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
L L++ +N + +G F L + L+++
Sbjct: 390 SLRILDLSRNLIREIHSGAFAKLGTITNLDVS 421
Score = 210 (79.0 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 99/405 (24%), Positives = 174/405 (42%)
Query: 62 SAIPIYLSL--QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
+A+P LS Q +D+S +P F+ L ELQL N S + +
Sbjct: 49 TAVPEGLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELK 108
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
V N++ + GL+AL+ L LD N + SVP SF L L L + N T +
Sbjct: 109 VLTLQNNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEV 168
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
+ L L AL L +++I D AF LS L L L +N+++S+ L LE
Sbjct: 169 PVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLE 228
Query: 239 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
L++ N K L LK L +++++ + GAF
Sbjct: 229 TLDLNYNYLDEFPQA-IKALPSLKELGFH-SNSISVIPDGAFGGNPLLRTIHLYDNPLSF 286
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+ A L +L+ L ++ + + ++ L ++ + I + L + ++
Sbjct: 287 -VGNSAFHNLSDLHCLVIRGASLVQWFPNLTGTVHLESLTLTGTKISSIPDDLCQNQKML 345
Query: 359 RRNTSAVFCNSPAPL-KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL 417
R T + N+ L + +L E++ ++ I +N F+GL+ LR L L+ N +
Sbjct: 346 R--TLDLSYNNIRDLPSFNGCRAL--EEISLQRNQISLIKENTFQGLTSLRILDLSRNLI 401
Query: 418 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
+ I + +KL + L++ F+ L + +GL+ L +L++ G
Sbjct: 402 REIHSGAFAKLGTITNLDVS---FNELTSFPTEGLNGLNQLKLVG 443
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 46/150 (30%), Positives = 72/150 (48%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRI 127
L+ + L+ T IP + Q+ L L L++N + P C + ++ +N+I
Sbjct: 321 LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNNIRDLPSFNGCRALEEISLQ---RNQI 377
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
S I + F+GLT+LRIL L N +R + + +F LG + L V N T+ NGL
Sbjct: 378 SLIKENTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLN 437
Query: 188 RLSALDLRGAGLTNISDN-AFRGLSGLRSL 216
+L + G + D A R + LRSL
Sbjct: 438 QLKLV-----GNFKLKDALAARDFANLRSL 462
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 55/230 (23%), Positives = 96/230 (41%)
Query: 314 LNLKENAFTSFSESML-AWPELRTIDIAENPIEC--GCNILWLREMLVRRNTSAVFCNSP 370
L++ N T E ++P L + +A N + + L+E+ V + P
Sbjct: 62 LDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALSGLKELKVLTLQNNQLRTVP 121
Query: 371 APLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
+ +++ LSA + L +T++ +++F GL LR L L DN L +P + LS L
Sbjct: 122 S----EAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVRPLSNLP 177
Query: 430 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXX 489
L+ L + N S + F LS L L + + + + + F D
Sbjct: 178 TLQALTLALNNISSIPDFAFTNLSSLVVLHLHN-NKIKSLSQHCF-DGLDNLETLDLNYN 235
Query: 490 XXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPI 538
+ A+ LP+L L N+ + + P LRTI + +NP+
Sbjct: 236 YLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFGGNPLLRTIHLYDNPL 284
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00047
Identities = 65/276 (23%), Positives = 101/276 (36%)
Query: 192 LDLRGAGLTNISDNAFRGLSGL-RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
+D G GLT + + GLS ++L ++ N + +P LEEL++ N S++
Sbjct: 41 VDCSGKGLTAVPE----GLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLI 96
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
GL LK L + +N R + E + GL
Sbjct: 97 HPKALSGLKELKVLTLQ--NNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQ 154
Query: 311 LYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLR-EMLVRRNTSAVFCN 368
L HL L +N+ T L+ P L+ + +A N I + + LV +
Sbjct: 155 LRHLWLDDNSLTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIK 214
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
S + + L +L DL + A + L L+ L N + IP
Sbjct: 215 SLSQHCFDGLDNLETLDLNY---NYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGN 271
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 464
L + + N S + F LS L L I GAS
Sbjct: 272 PLLRTIHLYDNPLSFVGNSAFHNLSDLHCLVIRGAS 307
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 226 (84.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 95/414 (22%), Positives = 159/414 (38%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N T + F GL L L L ++ I AF+ L L L L N LQ P
Sbjct: 65 NNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFL 124
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
++L L++ +N + F+G +K L++ + ++ + GAF
Sbjct: 125 GTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLD-YNQISCIEDGAFR-ALRDLEVLTL 182
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW--------PELRTIDIAENPI 344
+ + +P L L N + + LAW P + P
Sbjct: 183 NNNNITRLSVASFNHMPKLRTFRLHSNNL--YCDCHLAWLSDWLRQRPRVGLYTQCMGPS 240
Query: 345 EC-GCNILWLREM-LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
G N+ +++ V + S + L + + S + C G GLT I N
Sbjct: 241 HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE 300
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
++ +R L N ++ IP S +L +++ N S L F+GL L L + G
Sbjct: 301 TITEIR---LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 357
Query: 463 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESM 522
+ +T + K F + + DA L NL L+L +N + ++
Sbjct: 358 -NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 415
Query: 523 LAWP--ELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNSPAPLKYKSL 572
+ P ++T+ +A+NP C C++ WL + L TS C SP L K +
Sbjct: 416 FS-PLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRI 468
Score = 214 (80.4 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 74/291 (25%), Positives = 125/291 (42%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL G +T I+ F GL LR L L +N++ +I L LE L + +N +
Sbjct: 60 LDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFP 119
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F G S L RL+++ + + + + AF IE+GA L +L
Sbjct: 120 ELLFLGTSKLYRLDLS-ENQIQAIPRKAFRGAVDIKNLQLDYNQISC-IEDGAFRALRDL 177
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CN 368
L L N T S S P+LRT + N + C C++ WL + L +R ++ C
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCM 237
Query: 369 SPAPLKYKSLISLSAEDLGCAG-AGLTNISDNAFRGLSGLR-SLVLTDNR---LQSIPTK 423
P+ L+ ++ + + C+G S + + S + D R L IPT
Sbjct: 238 GPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTN 297
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+T E+ + QN ++ G F L+R++++ + ++ + AF
Sbjct: 298 LPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSN-NQISELAPDAF 344
Score = 174 (66.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 57/209 (27%), Positives = 88/209 (42%)
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
S V C+ A I + E L G +T I+ F GL LR L L +N++ +I
Sbjct: 37 STVDCHGLALRSVPRSIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLMENKISTIER 96
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
L LE L + +N + F G S L RL+++ + + + + AF
Sbjct: 97 GAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLS-ENQIQAIPRKAFRGAVDIKN 155
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECG 541
IE+ A L +L L L N T S S P+LRT + N + C
Sbjct: 156 LQLDYNQIS-CIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCD 214
Query: 542 CNILWLREMLVRRNTSAVF--CNSPAPLK 568
C++ WL + L +R ++ C P+ L+
Sbjct: 215 CHLAWLSDWLRQRPRVGLYTQCMGPSHLR 243
Score = 160 (61.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 115/548 (20%), Positives = 206/548 (37%)
Query: 46 SIQRLVLSTNRIKT--VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
S+Q L+L+ N+I VD+ ++ +L + L I G F P + + L N
Sbjct: 373 SLQLLLLNANKINCLRVDAFQDLH-NLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN- 430
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEG--LTALRILYLDDNQLRSVPTPSFIY 161
P +C + N I C L RI + + R +
Sbjct: 431 --P--FICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFI 486
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRL--SALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
G + R L+ AD A R + +D LT I D+ + + LR L
Sbjct: 487 PGT-EDYRSKLSG-DCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELR---LN 541
Query: 220 DNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
+N + T KL +L ++ N + +E G F+G + + + +T ++ L V+
Sbjct: 542 NNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLT-SNRLENVQHK 600
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTI 337
F + + +GL ++ L+L +N + + L T+
Sbjct: 601 MFKGLESLKTLMLRSNRISC-VGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTL 659
Query: 338 DIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTN 395
++ NP C C + WL E L ++ T C P LK + ++ +D C +
Sbjct: 660 NLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDS 719
Query: 396 ISDNAFR---GLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
R + L ++V N+ L+ +P K + + + EL + N F+++ K
Sbjct: 720 SCSPLSRCPTECTCLDTVVRCSNKGLKVLP-KGIPR--DVTELYLDGNHFTLVP----KE 772
Query: 452 LSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLN 509
L K L + SN ++ + +F++ I GL +L L+
Sbjct: 773 LYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CIPPRTFDGLKSLRLLS 831
Query: 510 LKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAP 566
L N + E + L + I NP+ C CN+ WL + + + C P
Sbjct: 832 LHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGE 891
Query: 567 LKYKSLIS 574
+ K L++
Sbjct: 892 MADKLLLT 899
Score = 148 (57.2 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 45/155 (29%), Positives = 73/155 (47%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
R+++ G N I+RI + F GL LR+L L +N++ ++ +F L L LR+ N
Sbjct: 59 RLDLNGNN-ITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQL 117
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ F G +L LDL + I AFRG +++L L N++ I L L
Sbjct: 118 FPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDL 177
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
E L + N + L F + L+ + ++NL
Sbjct: 178 EVLTLNNNNITRLSVASFNHMPKLRTFRLH-SNNL 211
Score = 143 (55.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 96/396 (24%), Positives = 167/396 (42%)
Query: 64 IPIYL--SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRV 119
IP L ++ + L + +IP G F P +KL + L++N+ + S +
Sbjct: 294 IPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 353
Query: 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
++G N+I+ + ++ FEGL +L++L L+ N++ + +F L L L + N T+A
Sbjct: 354 VLYG-NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 412
Query: 180 DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 239
G F+ L + + L A I D + L+ L N +++ + S RL
Sbjct: 413 KGTFSPLRAIQTMHL--AQNPFICDCHLKWLADY----LHTNPIETSGARCTSP-RRLAN 465
Query: 240 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG-AFADXXXXXXXXXXXXXXXX 298
IGQ +++ F+ S ++ I G + G FAD
Sbjct: 466 KRIGQ-----IKSKKFR-CSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDC 519
Query: 299 XIEEGALVGLPN---LY--HLNLKENAFTSFSESML--AWPELRTIDIAENPI---ECGC 348
++ L +P+ Y L L N FT + + P+LR I+ + N I E G
Sbjct: 520 SNQK--LTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGA 577
Query: 349 --NILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
+ E+L+ N N + +K L SL L ++ + +++F GLS
Sbjct: 578 FEGAAGVNEILLTSNRLE---NVQHKM-FKGLESLKT--LMLRSNRISCVGNDSFIGLSS 631
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
+R L L DN++ +I L L L + N F+
Sbjct: 632 VRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFN 667
Score = 129 (50.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 44/196 (22%), Positives = 82/196 (41%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEA 446
C+ LT I D+ + + LR L +N + T KL +L ++ N + +E
Sbjct: 519 CSNQKLTKIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEE 575
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
G F+G + + + +T ++ L V+ F + D+ +GL ++
Sbjct: 576 GAFEGAAGVNEILLT-SNRLENVQHKMFKGLESLKTLMLRSNRIS-CVGNDSFIGLSSVR 633
Query: 507 HLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNS 563
L+L +N + + L T+++ NP C C + WL E L ++ T C
Sbjct: 634 LLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQK 693
Query: 564 PAPLKYKSLISLSAED 579
P LK + ++ +D
Sbjct: 694 PYFLKEIPIQDVAIQD 709
Score = 126 (49.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 41/163 (25%), Positives = 71/163 (43%)
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
H P CS V+ G+ ++ I E +T +R L+ N ++ +P +F
Sbjct: 272 HCPAACTCS---NNIVDCRGKG-LTEIPTNLPETITEIR---LEQNSIKVIPPGAFSPYK 324
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L + + N + LA AF GL L++L L G +T + + F GL L+ L+L N++
Sbjct: 325 KLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI 384
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ L L L + N + G F L ++ + +
Sbjct: 385 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHL 427
Score = 116 (45.9 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 45/186 (24%), Positives = 80/186 (43%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHV---DL 75
P++ S + + L +P + +RL L+ N I + + L+H+ L
Sbjct: 29 PAQCSCSGSTVDCHGLALRSVPRSIPRNTERLDLNGNNITRITKTD--FAGLRHLRVLQL 86
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
I G F+ ++L L+LN N + FP+ + R+++ +N+I I +
Sbjct: 87 MENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDL-SENQIQAIPRK 145
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F G ++ L LD NQ+ + +F L L L + N T L+ +FN + +L
Sbjct: 146 AFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFR 205
Query: 194 LRGAGL 199
L L
Sbjct: 206 LHSNNL 211
Score = 81 (33.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/125 (21%), Positives = 53/125 (42%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L+S+P + + + T E L++ N + + F GL +L+ L++ + ++ + +GAF D
Sbjct: 46 LRSVP-RSIPRNT--ERLDLNGNNITRITKTDFAGLRHLRVLQLM-ENKISTIERGAFQD 101
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAE 341
E +G LY L+L EN + +++ + +
Sbjct: 102 LKELERLRLNRNHLQL-FPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDY 160
Query: 342 NPIEC 346
N I C
Sbjct: 161 NQISC 165
Score = 73 (30.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 54/250 (21%), Positives = 100/250 (40%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
++RL L+ N ++ + + S L +DLS IP F + LQL++N
Sbjct: 105 LERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYN--- 161
Query: 106 PQQIVC----SIISPRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 159
QI C + + R +E+ N I+R+ A F + LR L N L ++
Sbjct: 162 --QISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAW 219
Query: 160 IYLGMLAELRVGLNVFTTLADGAFNG--LGRLSALDLRGAGLTNISDNAFRGLSGLRSLV 217
+ + RVGL + G + + + +G + + L +
Sbjct: 220 LSDWLRQRPRVGLYT-QCMGPSHLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACT 278
Query: 218 LTDN----R---LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
++N R L IPT +T E+ + QN ++ G F L+R++++ +
Sbjct: 279 CSNNIVDCRGKGLTEIPTNLPETIT---EIRLEQNSIKVIPPGAFSPYKKLRRIDLSN-N 334
Query: 271 NLTRVRKGAF 280
++ + AF
Sbjct: 335 QISELAPDAF 344
Score = 38 (18.4 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 531 IDIAENPIECGCN 543
+D E ++CGC+
Sbjct: 1514 VDEVEKVVKCGCS 1526
Score = 38 (18.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 337 IDIAENPIECGCN 349
+D E ++CGC+
Sbjct: 1514 VDEVEKVVKCGCS 1526
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 223 (83.6 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 100/405 (24%), Positives = 175/405 (43%)
Query: 62 SAIPIYLSL--QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
+A+P LS Q +D+S +P F+ L ELQL N F S + +
Sbjct: 49 TAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
V N++ + GL+AL+ L LD N + SVP SF L L L + N+ T +
Sbjct: 109 VLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEV 168
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
+ L L AL L +++I D AF LS L L L +N+++S+ L LE
Sbjct: 169 PVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDNLE 228
Query: 239 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
L++ N K L LK L +++++ + GAFA
Sbjct: 229 TLDLNYNNLDEFPQA-IKALPSLKELGFH-SNSISVIPDGAFAGNPLLRTIHLYDNPLSF 286
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+ A L +L+ L ++ + + ++ L ++ + I + L + ++
Sbjct: 287 -VGNSAFHNLSDLHSLVIRGASLVQWFPNLAGTVHLESLTLTGTKISSIPDDLCQNQKML 345
Query: 359 RRNTSAVFCNSPAPL-KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL 417
R T + N L + +L E++ ++ I + F+GL+ LR L L+ N +
Sbjct: 346 R--TLDLSYNDIRDLPSFNGCRAL--EEISLQRNQISLIKETTFQGLTSLRILDLSRNLI 401
Query: 418 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
+ I + +KL + L++ F+ L + +GL+ L +L++ G
Sbjct: 402 REIHSGAFAKLGTITNLDVS---FNELTSFPTEGLNGLNQLKLVG 443
Score = 222 (83.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 89/392 (22%), Positives = 157/392 (40%)
Query: 71 QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRI 130
+ VD S +P G + +++ +N+ P+ + +++ G N +S I
Sbjct: 39 RRVDCSGKGLTAVP-EGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAG-NDLSFI 96
Query: 131 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 190
GL L++L L +NQL++VP+ + L L LR+ N T++ + +F GL +L
Sbjct: 97 HPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLR 156
Query: 191 ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L L LT + L L++L L N + SIP + L+ L L + N L
Sbjct: 157 HLWLDDNILTEVPVRPLSNLPTLQALTLALNNISSIPDFAFTNLSSLVVLHLHNNKIKSL 216
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
CF GL L+ L++ +NL + A I +GA G P
Sbjct: 217 SQHCFDGLDNLETLDLN-YNNLDEFPQAIKA--LPSLKELGFHSNSISVIPDGAFAGNPL 273
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP 370
L ++L +N + S A+ L D+ I + W + + ++
Sbjct: 274 LRTIHLYDNPLSFVGNS--AFHNLS--DLHSLVIRGASLVQWFPNLAGTVHLESLTLTGT 329
Query: 371 APLKYKSLISLSAEDLGCAGAGLTNISD-NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
+ + + L +I D +F G L + L N++ I LT
Sbjct: 330 KISSIPDDLCQNQKMLRTLDLSYNDIRDLPSFNGCRALEEISLQRNQISLIKETTFQGLT 389
Query: 430 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
L L++ +N + +G F L + L+++
Sbjct: 390 SLRILDLSRNLIREIHSGAFAKLGTITNLDVS 421
Score = 149 (57.5 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 64/225 (28%), Positives = 102/225 (45%)
Query: 50 LVLSTNRIKTVDS-AIPIYLSLQ--HVDLSHTTWLIIPIGGFEPQEKLVELQLNHN--KH 104
L L N++KTV S AI +LQ +D +H T +P FE +L L L+ N
Sbjct: 110 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT--SVPEDSFEGLVQLRHLWLDDNILTE 167
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
P + + ++ + + + + N IS I F L++L +L+L +N+++S+ F L
Sbjct: 168 VPVRPLSNLPTLQALTL-ALNNISSIPDFAFTNLSSLVVLHLHNNKIKSLSQHCFDGLDN 226
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N A L L L ++ I D AF G LR++ L DN L
Sbjct: 227 LETLDLNYNNLDEFPQ-AIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPLS 285
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEITG 268
+ L+ L L I G S+++ G +L+ L +TG
Sbjct: 286 FVGNSAFHNLSDLHSLVI--RGASLVQWFPNLAGTVHLESLTLTG 328
Score = 132 (51.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 46/150 (30%), Positives = 72/150 (48%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRI 127
L+ + L+ T IP + Q+ L L L++N + P C + ++ +N+I
Sbjct: 321 LESLTLTGTKISSIPDDLCQNQKMLRTLDLSYNDIRDLPSFNGCRALEEISLQ---RNQI 377
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
S I + F+GLT+LRIL L N +R + + +F LG + L V N T+ NGL
Sbjct: 378 SLIKETTFQGLTSLRILDLSRNLIREIHSGAFAKLGTITNLDVSFNELTSFPTEGLNGLN 437
Query: 188 RLSALDLRGAGLTNISDN-AFRGLSGLRSL 216
+L + G + D A R + LRSL
Sbjct: 438 QLKLV-----GNFQLKDALAARDFANLRSL 462
Score = 126 (49.4 bits), Expect = 0.00029, P = 0.00029
Identities = 68/280 (24%), Positives = 104/280 (37%)
Query: 192 LDLRGAGLTNISDNAFRGLSGL-RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
+D G GLT + + GLS ++L ++ N + +P LEEL++ N S +
Sbjct: 41 VDCSGKGLTAVPE----GLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFI 96
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
GL LK L + + L V A + E + GL
Sbjct: 97 HPKALSGLKELKVLTLQN-NQLKTVPSEAIRGLSALQSLRLDANHITS-VPEDSFEGLVQ 154
Query: 311 LYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNS 369
L HL L +N T L+ P L+ + +A N NI + + +S V +
Sbjct: 155 LRHLWLDDNILTEVPVRPLSNLPTLQALTLALN------NISSIPDFAFTNLSSLVVLHL 208
Query: 370 PAPLKYKSLISL---SAEDLGCAGAGLTNISD--NAFRGLSGLRSLVLTDNRLQSIPTKQ 424
K KSL ++L N+ + A + L L+ L N + IP
Sbjct: 209 HNN-KIKSLSQHCFDGLDNLETLDLNYNNLDEFPQAIKALPSLKELGFHSNSISVIPDGA 267
Query: 425 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 464
+ L + + N S + F LS L L I GAS
Sbjct: 268 FAGNPLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGAS 307
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 44/165 (26%), Positives = 73/165 (44%)
Query: 376 KSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 434
+++ LSA + L +T++ +++F GL LR L L DN L +P + LS L L+ L
Sbjct: 123 EAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNILTEVPVRPLSNLPTLQAL 182
Query: 435 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXII 494
+ N S + F LS L L + + + + + F D
Sbjct: 183 TLALNNISSIPDFAFTNLSSLVVLHLHN-NKIKSLSQHCF-DGLDNLETLDLNYNNLDEF 240
Query: 495 EEDALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPI 538
+ A+ LP+L L N+ + + A P LRTI + +NP+
Sbjct: 241 PQ-AIKALPSLKELGFHSNSISVIPDGAFAGNPLLRTIHLYDNPL 284
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 220 (82.5 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 96/366 (26%), Positives = 153/366 (41%)
Query: 24 TRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSA-IPIYLSLQHVDLSHTTWLI 82
TR SC+ + L +P + L LS NR++ V L L+ +DLS+
Sbjct: 37 TRSVSCHRRR--LAQVPEGIPIETRSLDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSS 94
Query: 83 IPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
+ F Q +L L+L N+ P+ + + +++ QNR+ + FE
Sbjct: 95 VEPNSFRAQPRLRSLRLRSNQLTLLPRGALAGLSELTLLDV-SQNRLVILLDYGFEEQRR 153
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
LR+L L DN+L + +F L L L + +T+ A L L++L LR G+
Sbjct: 154 LRVLELSDNELVFIAPRAFSGLASLRSLTLQRCNLSTVPTHALAHLHGLTSLRLRDLGIA 213
Query: 201 NISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
+ + F+GL L+ L + L+ PT L L L L I + + L
Sbjct: 214 ELQAHTFKGLPRLKHLEVDRWPLLEGFPTSALQGLN-LSTLSITHTNLTSVPV--VTNLL 270
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
YL L ++ S + RV + +E A G +L L+L N
Sbjct: 271 YLTHLNLS-YSRI-RVLPAGWLRGMDRLEVLRVRQANLLSVEPQAFQGASSLRILDLCYN 328
Query: 320 AFTSFSESMLAWPE-LRTIDIAENPIECGCNILWLREM---LVRRNTSAVFCNSPAPLKY 375
+ S+ E L+T+ I +NP+ C C + WL E L+ + C++PAPL
Sbjct: 329 RLATLERSVFPVTEALQTLLIGQNPLVCDCRLRWLLERTPPLLYGDVQPE-CSAPAPLAG 387
Query: 376 KSLISL 381
K L L
Sbjct: 388 KPLRDL 393
Score = 205 (77.2 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 93/339 (27%), Positives = 140/339 (41%)
Query: 106 PQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA-LRILYLDDNQLRSVPTPSFIYLGM 164
P + CS+ P R + R++++ EG+ R L L N+LR V +F L +
Sbjct: 28 PARCECSV--PTRSVSCHRRRLAQVP----EGIPIETRSLDLSKNRLRIVTPQNFSSLLL 81
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L EL + N+ +++ +F RL +L LR LT + A GLS L L ++ NRL
Sbjct: 82 LEELDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLV 141
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 284
+ + RL LE+ N + F GL+ L+ L + NL+ V A A
Sbjct: 142 ILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRSLTLQRC-NLSTVPTHALAHLH 200
Query: 285 XXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESMLAWPELRTIDIAEN- 342
++ GLP L HL + F S L L T+ I
Sbjct: 201 GLTSLRLRDLGIAE-LQAHTFKGLPRLKHLEVDRWPLLEGFPTSALQGLNLSTLSITHTN 259
Query: 343 --PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
+ N+L+L + + + V PA + + L E L A L ++ A
Sbjct: 260 LTSVPVVTNLLYLTHLNLSYSRIRVL---PAGW-LRGMDRL--EVLRVRQANLLSVEPQA 313
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
F+G S LR L L NRL ++ L+ L IGQN
Sbjct: 314 FQGASSLRILDLCYNRLATLERSVFPVTEALQTLLIGQN 352
Score = 156 (60.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 90/374 (24%), Positives = 149/374 (39%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
RS+ RL +P + + TR L++ +N ++ F L L+ L+++ + L+
Sbjct: 38 RSVSCHRRRLAQVP-EGIPIETR--SLDLSKNRLRIVTPQNFSSLLLLEELDLSN-NLLS 93
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWP 332
V +F + GAL GL L L++ +N +
Sbjct: 94 SVEPNSFR-AQPRLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLVILLDYGFEEQR 152
Query: 333 ELRTIDIAENPI-----ECGCNILWLREMLVRR-NTSAVFCNSPAPLKYKSLISLSAEDL 386
LR +++++N + + LR + ++R N S V ++ A L L SL DL
Sbjct: 153 RLRVLELSDNELVFIAPRAFSGLASLRSLTLQRCNLSTVPTHALAHLH--GLTSLRLRDL 210
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 445
G A + + F+GL L+ L + L+ PT L L L L I + +
Sbjct: 211 GIA-----ELQAHTFKGLPRLKHLEVDRWPLLEGFPTSALQGLN-LSTLSITHTNLTSVP 264
Query: 446 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNL 505
L YL L ++ S + RV + +E A G +L
Sbjct: 265 V--VTNLLYLTHLNLS-YSRI-RVLPAGWLRGMDRLEVLRVRQANLLSVEPQAFQGASSL 320
Query: 506 YHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCNILWLREM---LVRRNTSAVFC 561
L+L N + S+ E L+T+ I +NP+ C C + WL E L+ + C
Sbjct: 321 RILDLCYNRLATLERSVFPVTEALQTLLIGQNPLVCDCRLRWLLERTPPLLYGDVQPE-C 379
Query: 562 NSPAPLKYKSLISL 575
++PAPL K L L
Sbjct: 380 SAPAPLAGKPLRDL 393
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 219 (82.2 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 60/167 (35%), Positives = 90/167 (53%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N I I+ F GL L L L DN+L ++P +F+YL L EL + N
Sbjct: 68 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNP 127
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
++ AFN + L LDL L+ IS+ AF GLS LR L L L+ IP L+
Sbjct: 128 IESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTP 185
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
L +L+EL++ N + + G F+GL +L++L + S + + + AF
Sbjct: 186 LVKLDELDLSGNHLTAIRPGSFQGLMHLQKLWMI-QSQIQVIERNAF 231
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 76/270 (28%), Positives = 114/270 (42%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 53 ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 112
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL I L+ L L +
Sbjct: 113 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 172
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
++ E L L L+++G ++LT +R G+F IE
Sbjct: 173 AM--CNLREIPNLTPLVKLDELDLSG-NHLTAIRPGSF-QGLMHLQKLWMIQSQIQVIER 228
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRR-- 360
A L +L +NL N T + L I + NP C C+ILWL + +
Sbjct: 229 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHNPWNCNCDILWLSWWIKDKAP 288
Query: 361 -NTSAVF-CNSPAPLKYKSLISLSAEDLGC 388
NT+ C++P LK + + L C
Sbjct: 289 SNTACCARCHTPPSLKGRYIGELDLNYFTC 318
Score = 202 (76.2 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 73/233 (31%), Positives = 105/233 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NL E + +I +S ++ L LS N I+T++ A +L ++
Sbjct: 39 PDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 98
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G F KL EL L +N + P I S RR+++ R+S I +
Sbjct: 99 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 158
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
FEGL+ LR L L LR +P + L L EL + N T + G+F GL L L
Sbjct: 159 GAFEGLSNLRYLNLAMCNLREIP--NLTPLVKLDELDLSGNHLTAIRPGSFQGLMHLQKL 216
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ + + I NAF L L + L N L +P + L RLE + + N
Sbjct: 217 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL-RLERIHLHHN 268
Score = 193 (73.0 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 136 EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ T R+L L +NQ++ + SF +L L L++ N T+ GAFNGL L+ L+L
Sbjct: 40 DGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 99
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAG 253
LT I + AF LS L+ L L +N ++SIP+ +++ L L++G+ S + G
Sbjct: 100 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 159
Query: 254 CFKGLSYLKRLEITGASNLTRV 275
F+GLS L+ L + NL +
Sbjct: 160 AFEGLSNLRYLNLA-MCNLREI 180
Score = 140 (54.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 56/218 (25%), Positives = 89/218 (40%)
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD- 414
L NT +F N + + + LS ++L + +I AF + LR L L +
Sbjct: 91 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 150
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL I L+ L L + ++ E L L L+++G ++LT +R G+F
Sbjct: 151 KRLSYISEGAFEGLSNLRYLNLAM--CNLREIPNLTPLVKLDELDLSG-NHLTAIRPGSF 207
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIA 534
+IE +A L +L +NL N T + L I +
Sbjct: 208 -QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLH 266
Query: 535 ENPIECGCNILWLREMLVRR---NTSAVF-CNSPAPLK 568
NP C C+ILWL + + NT+ C++P LK
Sbjct: 267 HNPWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLK 304
>UNIPROTKB|O94991 [details] [associations]
symbol:SLITRK5 "SLIT and NTRK-like protein 5" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471085
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 eggNOG:NOG147171 EMBL:AB020725 EMBL:AK024251
EMBL:AL603883 EMBL:BC098106 EMBL:BC103509 IPI:IPI00016679
RefSeq:NP_056382.1 UniGene:Hs.591208 ProteinModelPortal:O94991
SMR:O94991 STRING:O94991 PhosphoSite:O94991 PaxDb:O94991
PRIDE:O94991 Ensembl:ENST00000325089 GeneID:26050 KEGG:hsa:26050
UCSC:uc001vln.3 CTD:26050 GeneCards:GC13P088324 HGNC:HGNC:20295
HPA:HPA013843 MIM:609680 neXtProt:NX_O94991 PharmGKB:PA134885524
InParanoid:O94991 OMA:HHRGPAL OrthoDB:EOG4X97GH PhylomeDB:O94991
GenomeRNAi:26050 NextBio:47908 ArrayExpress:O94991 Bgee:O94991
CleanEx:HS_SLITRK5 Genevestigator:O94991 GermOnline:ENSG00000165300
Uniprot:O94991
Length = 958
Score = 144 (55.7 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 53/186 (28%), Positives = 79/186 (42%)
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F +GL L L +NR+ I + LT L L + N L F GL L+ L +
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFL 488
Query: 267 TGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
NL R ++ G F D + G GL L LNL+ N FTS
Sbjct: 489 Q--YNLIREIQSGTF-DPVPNLQLLFLNNNLLQAMPSGVFSGL-TLLRLNLRSNHFTSLP 544
Query: 326 ESMLAWPELRT---IDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPAPLKYKSL 378
S + +L++ ID+ +NP +C C+I LW+ ++ V V C +P +
Sbjct: 545 VSGVL-DQLKSLIQIDLHDNPWDCTCDIVGMKLWVEQLKVGVLVDEVICKAPKKFAETDM 603
Query: 379 ISLSAE 384
S+ +E
Sbjct: 604 RSIKSE 609
Score = 143 (55.4 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 66/270 (24%), Positives = 111/270 (41%)
Query: 317 KENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYK 376
K+ ++++ S +A+ + + E P C CN L + ++ + N S A L+ K
Sbjct: 351 KDLGYSNYGPS-IAYQTKSPVPL-ECPTACSCN-LQISDLGLNVNCQERKIESIAELQPK 407
Query: 377 SLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
+ + + + + F +GL L L +NR+ I + LT L L +
Sbjct: 408 PY---NPKKMYLTENYIAVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYL 464
Query: 437 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIE 495
N L F GL L+ L + NL R ++ G F D +
Sbjct: 465 NGNRIERLSPELFYGLQSLQYLFLQ--YNLIREIQSGTF-DPVPNLQLLFLNNNLLQAMP 521
Query: 496 EDALVGLPNLYHLNLKENAFTSFSESMLAWPELRT---IDIAENPIECGCNI----LWLR 548
GL L LNL+ N FTS S + +L++ ID+ +NP +C C+I LW+
Sbjct: 522 SGVFSGL-TLLRLNLRSNHFTSLPVSGVL-DQLKSLIQIDLHDNPWDCTCDIVGMKLWVE 579
Query: 549 EMLVRRNTSAVFCNSPAPLKYKSLISLSAE 578
++ V V C +P + S+ +E
Sbjct: 580 QLKVGVLVDEVICKAPKKFAETDMRSIKSE 609
Score = 132 (51.5 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 48/163 (29%), Positives = 73/163 (44%)
Query: 109 IVCSIISPRRVEIF----GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
I S ISP R I+ N ++R+ F T IL+L N ++ + T +F L
Sbjct: 71 ISLSEISPPRFPIYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRG 130
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N L D F GL L L + ++ I NAF L L+ L+L DN L
Sbjct: 131 LRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLS 190
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEI 266
S+P L + L L++ N +L G + + + L++
Sbjct: 191 SLPNN-LFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQL 232
Score = 127 (49.8 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 40/124 (32%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRIS I F LT LR LYL+ N++ + F L L L + N+ + G
Sbjct: 441 GNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGT 500
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L + F GL+ LR L L N S+P L +L L +++
Sbjct: 501 FDPVPNLQLLFLNNNLLQAMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLDQLKSLIQID 559
Query: 242 IGQN 245
+ N
Sbjct: 560 LHDN 563
Score = 121 (47.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+YL +N + V F+ L L +G N + + D AF L L L L G + +S
Sbjct: 414 MYLTENYIAVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLS 473
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
F GL L+ L L N ++ I + + L+ L + N + +G F GL+ L+
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTLLR 532
Score = 88 (36.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 35/160 (21%), Positives = 64/160 (40%)
Query: 189 LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248
L L L ++ I D AF L+ LR L L NR++ + + L L+ L + N
Sbjct: 435 LDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIR 494
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+++G F + L+ L + + L + G F+ + G L L
Sbjct: 495 EIQSGTFDPVPNLQLLFLNN-NLLQAMPSGVFSGLTLLRLNLRSNHFTSLPVS-GVLDQL 552
Query: 309 PNLYHLNLKENAFTSFSE--SMLAWPELRTIDIAENPIEC 346
+L ++L +N + + M W E + + + + C
Sbjct: 553 KSLIQIDLHDNPWDCTCDIVGMKLWVEQLKVGVLVDEVIC 592
Score = 84 (34.6 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHF 105
+Q L+L+ N + ++ + + ++ L H+DL ++P +G + +K+VELQL N
Sbjct: 179 LQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN--- 235
Query: 106 PQQIVCSIIS 115
P C +IS
Sbjct: 236 PWNCSCELIS 245
Score = 67 (28.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 31/119 (26%), Positives = 49/119 (41%)
Query: 47 IQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH- 104
I L+LS N + + + Y + L I G F L L LN+NK
Sbjct: 83 IYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 105 -FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ + +++ N IS I+ F L L++L L+DN L S+P F ++
Sbjct: 143 LLRDDTFLGLENLEYLQV-DYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFV 200
>FB|FBgn0003255 [details] [associations]
symbol:rk "rickets" species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS;NAS]
[GO:0016021 "integral to membrane" evidence=IEA;ISS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA;ISS]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0008188
"neuropeptide receptor activity" evidence=ISS] [GO:0007564
"regulation of chitin-based cuticle tanning" evidence=IMP]
[GO:0001837 "epithelial to mesenchymal transition" evidence=IMP]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:AE014134
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0001837
InterPro:IPR025875 Pfam:PF12799 GO:GO:0016500 GO:GO:0008188
GeneTree:ENSGT00650000092962 KO:K08399 RefSeq:NP_476702.1
UniGene:Dm.6481 ProteinModelPortal:Q7KTA0 SMR:Q7KTA0 STRING:Q7KTA0
PRIDE:Q7KTA0 EnsemblMetazoa:FBtr0080610 GeneID:34819
KEGG:dme:Dmel_CG8930 UCSC:CG8930-RA CTD:34819 FlyBase:FBgn0003255
InParanoid:Q7KTA0 OMA:WLITRKT OrthoDB:EOG4FN2ZQ PhylomeDB:Q7KTA0
GenomeRNAi:34819 NextBio:790377 ArrayExpress:Q7KTA0 Bgee:Q7KTA0
GO:GO:0007564 Uniprot:Q7KTA0
Length = 1360
Score = 224 (83.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 113/429 (26%), Positives = 176/429 (41%)
Query: 42 HSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHV--DLSHTTWLIIPIGGFEPQEKLVELQL 99
H S++ L LS I + A+P+ L + V DL + + F L EL L
Sbjct: 153 HCTGSLEVLRLSCRGIGIL--AVPVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELTL 210
Query: 100 NHNK--HFPQQIVCSIISPRRVEIFGQN-RISRIDQACFEGLTALRILYLDDNQLRSVPT 156
+ N + + +R+ + QN + + F+GL L L L+ N L S+
Sbjct: 211 SDNSIINMDPNAFYGLAKLKRLSL--QNCGLKSLPPQSFQGLAQLTSLQLNGNALVSLDG 268
Query: 157 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSL 216
+L L LR+ N+F + A GL L AL+L LT I+D F + L L
Sbjct: 269 DCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPRMPNLIVL 328
Query: 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 276
+L N++ I L LT L+ LE+ N S L G K LS L+ L IT SN R+R
Sbjct: 329 LLKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGLSK-LSQLQELSIT--SN--RLR 383
Query: 277 KGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESMLAWP-EL 334
+ I GA G+ L L L + SF E E+
Sbjct: 384 WINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTLRSFPELEACHALEI 443
Query: 335 RTID---IAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
+D I E P L+ + ++ N+ N + + L+ LS+ +
Sbjct: 444 LKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCRDLR-LLDLSSNQI----- 497
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
I F GL L L+L+ NR++++P + +L+ L++ N S + F G
Sbjct: 498 --EKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEAFSG 555
Query: 452 LSYLKRLEI 460
+ L+ L +
Sbjct: 556 FTALEDLNL 564
Score = 213 (80.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 96/392 (24%), Positives = 167/392 (42%)
Query: 69 SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNR 126
+L+ + LS + + + F KL L L + K P Q + +++ G N
Sbjct: 204 NLEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLKSLPPQSFQGLAQLTSLQLNG-NA 262
Query: 127 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 186
+ +D C L LR L L+ N +PT + L L L +G N+ T + D F +
Sbjct: 263 LVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLLTIINDEDFPRM 322
Query: 187 GRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 246
L L L+ + IS A + L+ L+ L L DN + S+P + LSKL++L+EL I N
Sbjct: 323 PNLIVLLLKRNQIMKISAGALKNLTALKVLELDDNLISSLP-EGLSKLSQLQELSITSNR 381
Query: 247 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV 306
+ ++ L++ A+ L+ + GAF E L
Sbjct: 382 LRWINDTELP--RSMQMLDMR-ANPLSTISPGAFRGMSKLRKLILSDVRTLRSFPE--LE 436
Query: 307 GLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREM-LVRRNTSA 364
L L L ++ P L+++++ N ++ N+ R++ L+ +++
Sbjct: 437 ACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCRDLRLLDLSSNQ 496
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 424
+ P + L L+ DL + + + +AF+G+ L+ L L N + I +
Sbjct: 497 IEKIQGKP--FNGLKQLN--DLLLSYNRIKALPQDAFQGIPKLQLLDLEGNEISYIHKEA 552
Query: 425 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
S T LE+L +G N F L + L +LK
Sbjct: 553 FSGFTALEDLNLGNNIFPELPESGLRALLHLK 584
Score = 149 (57.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 58/220 (26%), Positives = 99/220 (45%)
Query: 47 IQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-- 103
+Q L +++NR++ + D+ +P S+Q +D+ I G F KL +L L+ +
Sbjct: 372 LQELSITSNRLRWINDTELP--RSMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTL 429
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
FP+ C + +++ G + C + L+ L L N L+ +P S
Sbjct: 430 RSFPELEACHALEILKLDRAGIQEVPA--NLCRQ-TPRLKSLELKTNSLKRIPNLSSCRD 486
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L +L N + FNGL +L+ L L + + +AF+G+ L+ L L N
Sbjct: 487 LRLLDL--SSNQIEKIQGKPFNGLKQLNDLLLSYNRIKALPQDAFQGIPKLQLLDLEGNE 544
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ I + S T LE+L +G N F L + L +LK
Sbjct: 545 ISYIHKEAFSGFTALEDLNLGNNIFPELPESGLRALLHLK 584
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 88/367 (23%), Positives = 144/367 (39%)
Query: 187 GRLSALDL--RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
G L L L RG G+ + N + + L L +N L + LEEL +
Sbjct: 156 GSLEVLRLSCRGIGILAVPVNL---PNEVVVLDLGNNNLTKLEANSFFMAPNLEELTLSD 212
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N ++ F GL+ LKRL + L + +F ++
Sbjct: 213 NSIINMDPNAFYGLAKLKRLSLQNCG-LKSLPPQSF-QGLAQLTSLQLNGNALVSLDGDC 270
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWL--REMLVRRNT 362
L L L L L+ N F + LA LRT++ + G N+L + E R
Sbjct: 271 LGHLQKLRTLRLEGNLFYRIPTNALAG--LRTLEA----LNLGSNLLTIINDEDFPRMPN 324
Query: 363 SAVFCNSPAPLKYKSLISLSAEDL-GCAGAGLTNISDNAFRGL-------SGLRSLVLTD 414
V LK ++ +SA L + + DN L S L+ L +T
Sbjct: 325 LIVLL-----LKRNQIMKISAGALKNLTALKVLELDDNLISSLPEGLSKLSQLQELSITS 379
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
NRL+ I +L + ++ L++ N S + G F+G+S L++L + S++ +R +F
Sbjct: 380 NRLRWINDTELPR--SMQMLDMRANPLSTISPGAFRGMSKLRKLIL---SDVRTLR--SF 432
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALV--GLPNLYHLNLKENAFTSFSESMLAWPELRTID 532
+ I E A + P L L LK N+ ++ + +LR +D
Sbjct: 433 PELEACHALEILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIP-NLSSCRDLRLLD 491
Query: 533 IAENPIE 539
++ N IE
Sbjct: 492 LSSNQIE 498
>UNIPROTKB|I3LT51 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 GO:GO:0048839 GeneTree:ENSGT00650000092962
EMBL:CU695170 EMBL:CU463987 EMBL:CU466536
Ensembl:ENSSSCT00000029371 OMA:YSTHILM Uniprot:I3LT51
Length = 210
Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 51/161 (31%), Positives = 76/161 (47%)
Query: 97 LQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 156
LQ NH + P + + ++ S + + + N IS + +CF GL +LR L+LDDN L +P
Sbjct: 2 LQNNHLRQVPTEALQNLRSLQSLRL-DANHISYVPPSCFSGLHSLRHLWLDDNALTEIPV 60
Query: 157 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSL 216
+F L L + + LN + D AF L L L L + ++ F GL L +L
Sbjct: 61 QAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETL 120
Query: 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 257
L N L PT + L+ L+EL N + F G
Sbjct: 121 DLNYNNLDEFPTA-IRTLSNLKELGFHSNNIKSIPEKAFVG 160
Score = 174 (66.3 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 58/195 (29%), Positives = 81/195 (41%)
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L +N LR VPT + L L LR+ N + + F+GL L L L LT I
Sbjct: 2 LQNNHLRQVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQ 61
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
AFR LS L+++ L N++ IP L+ L L + N L CF GL L+ L+
Sbjct: 62 AFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLD 121
Query: 266 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
+ +NL I E A VG P+L ++ +N
Sbjct: 122 LN-YNNLDEFPTAI--RTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVG 178
Query: 326 ESMLAW-PELRTIDI 339
S PELRT+ +
Sbjct: 179 RSAFQHLPELRTLTL 193
Score = 161 (61.7 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 53/193 (27%), Positives = 82/193 (42%)
Query: 83 IPIGGFEPQEKLVELQL--NHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
+P + L L+L NH + P + S R + + N ++ I F L+A
Sbjct: 10 VPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWL-DDNALTEIPVQAFRSLSA 68
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
L+ + L N++ +P +F L L L + N +L F+GL L LDL L
Sbjct: 69 LQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLD 128
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 260
A R LS L+ L N ++SIP K L + N ++ F+ L
Sbjct: 129 EFP-TAIRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGRSAFQHLPE 187
Query: 261 LKRLEITGASNLT 273
L+ L + GAS +T
Sbjct: 188 LRTLTLNGASQIT 200
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/194 (29%), Positives = 85/194 (43%)
Query: 31 LQEANLDVIPSHS--N-PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIG 86
LQ +L +P+ + N S+Q L L N I V S SL+H+ L IP+
Sbjct: 2 LQNNHLRQVPTEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQ 61
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F L + L NK H P ++ S + + NRI + + CF+GL +L L
Sbjct: 62 AFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHN-NRIHSLGKKCFDGLHSLETL 120
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L+ N L PT + L L EL N ++ + AF G L + + +
Sbjct: 121 DLNYNNLDEFPT-AIRTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYDNPIQLVGR 179
Query: 205 NAFRGLSGLRSLVL 218
+AF+ L LR+L L
Sbjct: 180 SAFQHLPELRTLTL 193
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 40/142 (28%), Positives = 57/142 (40%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
LT I AFR LS L+++ L N++ IP L+ L L + N L CF GL
Sbjct: 55 LTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGL 114
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
L+ L++ +NL I E A VG P+L ++ +
Sbjct: 115 HSLETLDLN-YNNLDEFPTAI--RTLSNLKELGFHSNNIKSIPEKAFVGNPSLITIHFYD 171
Query: 513 NAFTSFSESMLAW-PELRTIDI 533
N S PELRT+ +
Sbjct: 172 NPIQLVGRSAFQHLPELRTLTL 193
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 219 (82.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 92/362 (25%), Positives = 154/362 (42%)
Query: 23 STRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI-YLSLQHVDLSHTTWL 81
S ++ S + L IP + L LS NR+K+++ I Y L+ +DLS
Sbjct: 35 SAQNKSVSCHRRRLLAIPEGIPIETKILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIA 94
Query: 82 IIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLT 139
+ G F L L+L N K P + + + +++I +N+I + F+ L
Sbjct: 95 NVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDI-SENKIVILLDYMFQDLH 153
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
L+ L + DN L + +F L L +L + T + A + L L AL L+ +
Sbjct: 154 NLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNI 213
Query: 200 TNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
N+ AF+ L L++L + L +P L L L L I S + FK L
Sbjct: 214 NNMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGLN-LTSLSITNTNLSTVPFLAFKHL 272
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
YL L ++ + ++ + G F+D IE + GL L LN+ +
Sbjct: 273 VYLTHLNLS-YNPISTIEAGMFSDLIRLQELHIVGAQLRT-IEPHSFQGLRFLRVLNVSQ 330
Query: 319 NAFTSFSESMLAWPE-LRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCNSPAPLKY 375
N + E++ + P L + I NP+ C C +LWL R+ ++ C P ++
Sbjct: 331 NLLETLEENVFSSPRALEVLSINNNPLACDCRLLWLLQRQPNLQFGGQQPMCAGPDTIRE 390
Query: 376 KS 377
+S
Sbjct: 391 RS 392
Score = 168 (64.2 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 81/361 (22%), Positives = 151/361 (41%)
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
RL +IP + + T++ L++ +N + F L+ ++++ + + V GAF
Sbjct: 47 RLLAIP-EGIPIETKI--LDLSKNRLKSINPEEFISYPLLEEIDLSD-NIIANVEPGAF- 101
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIA 340
+ + G GL NL L++ EN + M L+++++
Sbjct: 102 NNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVG 161
Query: 341 ENPI-----ECGCNILWLREMLVRR-NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
+N + +L L ++ + + N +AV + + L+ SLI+L + L +
Sbjct: 162 DNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLR--SLIALHLKHLN-----IN 214
Query: 395 NISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 453
N+ AF+ L L++L + L +P L L L L I S + FK L
Sbjct: 215 NMPVYAFKRLFHLKNLEIDYWPLLDLMPANSLYGLN-LTSLSITNTNLSTVPFLAFKHLV 273
Query: 454 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN 513
YL L ++ + ++ + G F+D I E + GL L LN+ +N
Sbjct: 274 YLTHLNLS-YNPISTIEAGMFSDLIRLQELHIVGAQLRTI-EPHSFQGLRFLRVLNVSQN 331
Query: 514 AFTSFSESMLAWPE-LRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCNSPAPLKYK 570
+ E++ + P L + I NP+ C C +LWL R+ ++ C P ++ +
Sbjct: 332 LLETLEENVFSSPRALEVLSINNNPLACDCRLLWLLQRQPNLQFGGQQPMCAGPDTIRER 391
Query: 571 S 571
S
Sbjct: 392 S 392
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 64/254 (25%), Positives = 101/254 (39%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
L L+ NRL+SI ++ LEE+++ N + +E G F L L+ L + G + L V
Sbjct: 62 LDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKG-NRLKLV 120
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE----SMLAW 331
G F ++ L NL L + +N S +L+
Sbjct: 121 PLGVFTGLSNLTKLDISENKIVILLDY-MFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 332 PEL--RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
+L ++ P E + LR ++ N P +K L L ++
Sbjct: 180 EQLTLEKCNLTAVPTEA---LSHLRSLIALHLKHLNINNMPV-YAFKRLFHLKNLEIDYW 235
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
L + N+ GL+ L SL +T+ L ++P L L L + N S +EAG F
Sbjct: 236 PL-LDLMPANSLYGLN-LTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMF 293
Query: 450 KGLSYLKRLEITGA 463
L L+ L I GA
Sbjct: 294 SDLIRLQELHIVGA 307
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 65/273 (23%), Positives = 110/273 (40%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL L +I+ F L + L+DN + ++ + L L L + N ++
Sbjct: 62 LDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVP 121
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 122 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLHNLKSLEVGDNDLVY-ISHRAFSGLLSL 179
Query: 312 YHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCN---ILWLREMLVRRNTSAVFCN 368
L L++ T+ L+ LR++ IA + N + + + +N +
Sbjct: 180 EQLTLEKCNLTAVPTEALS--HLRSL-IALHLKHLNINNMPVYAFKRLFHLKNLEIDYWP 236
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
+ SL L+ L L+ + AF+ L L L L+ N + +I S L
Sbjct: 237 LLDLMPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDL 296
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
RL+EL I +E F+GL +L+ L ++
Sbjct: 297 IRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVS 329
Score = 128 (50.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 63/265 (23%), Positives = 118/265 (44%)
Query: 10 RSKCMNPYEPSRFSTR---DPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI 66
R K +NP E + D S N+ AN++ ++ +++ L L NR+K V +
Sbjct: 68 RLKSINPEEFISYPLLEEIDLSDNII-ANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFT 126
Query: 67 YLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFG 123
LS L +D+S +I+ F+ L L++ N + + ++S ++ +
Sbjct: 127 GLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL-NVFTTLADGA 182
N ++ + L +L L+L + ++P +F L L L + + + +
Sbjct: 187 CN-LTAVPTEALSHLRSLIALHLKHLNINNMPVYAFKRLFHLKNLEIDYWPLLDLMPANS 245
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 242
GL L++L + L+ + AF+ L L L L+ N + +I S L RL+EL I
Sbjct: 246 LYGLN-LTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHI 304
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEIT 267
+E F+GL +L+ L ++
Sbjct: 305 VGAQLRTIEPHSFQGLRFLRVLNVS 329
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 213 (80.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 79/308 (25%), Positives = 124/308 (40%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIIS-PRRVEIFGQN-RI 127
LQHV IP + KL+ LQ N+ FP S + P V + Q+ +I
Sbjct: 35 LQHVICDKVGLQKIP--KVSEKTKLLNLQRNN---FPVLATNSFRAMPNLVSLHLQHCQI 89
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
+ F GL L LYL N +R + +F L L L + N T L G + L
Sbjct: 90 REVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLV 149
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L L L + + AF+G LR L L++N L S+ L + L + + +N
Sbjct: 150 NLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQL 209
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
S + L ++ L+++ + L + AF +GA +G
Sbjct: 210 SSYPSAALSKLRVVEELKLSH-NPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLG 268
Query: 308 LPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA-VF 366
+ L H++L+ N S + L T+ + NP +C C + LR L + +
Sbjct: 269 VTTLKHVHLENNRLHQLP-SNFPFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSRPDAT 327
Query: 367 CNSPAPLK 374
C SPA +
Sbjct: 328 CASPAKFR 335
Score = 179 (68.1 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 62/224 (27%), Positives = 100/224 (44%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLII 83
S +LQ + + + + +++L+ LS N I+ + + A L ++ L H +
Sbjct: 81 SLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTEL 140
Query: 84 PIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
P G P L LQLN+NK + R +N +S + + + L
Sbjct: 141 PRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLA 200
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTN 201
YLD NQL S P+ + L ++ EL++ N ++ D AF GR L L L L
Sbjct: 201 KFYLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEK 260
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
SD AF G++ L+ + L +NRL +P+ LE L + N
Sbjct: 261 FSDGAFLGVTTLKHVHLENNRLHQLPSN--FPFDSLETLTLTNN 302
Score = 160 (61.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 59/237 (24%), Positives = 107/237 (45%)
Query: 21 RFSTRDPSCNLQEANLDVIPSHS---NPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLS 76
+ S + NLQ N V+ ++S P++ L L +I+ V + A L ++ LS
Sbjct: 50 KVSEKTKLLNLQRNNFPVLATNSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLS 109
Query: 77 HTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQAC 134
H ++ G F+ +L L L+HNK P+ ++ +++ +++ N+I +
Sbjct: 110 HNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQL-NNNKIRELRSGA 168
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F+G LR LYL +N L S+ + + LA+ + N ++ A + L + L L
Sbjct: 169 FQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVEELKL 228
Query: 195 RGAGLTNISDNAFRGLSG-LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L +I DNAF+ L +L L + L+ +T L+ + + N L
Sbjct: 229 SHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLHQL 285
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/218 (22%), Positives = 94/218 (43%)
Query: 51 VLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQI 109
VL+TN + + + + ++L QH + + G F ++L+ L L+HN +
Sbjct: 67 VLATNSFRAMPNLVSLHL--QHCQIRE-----VAAGAFRGLKQLIYLYLSHNDIRVLRAG 119
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
++ N+++ + + L L IL L++N++R + + +F L L
Sbjct: 120 AFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLY 179
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+ N ++L GA + + L+ L L++ A L + L L+ N L+SIP
Sbjct: 180 LSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDN 239
Query: 230 QLSKLTR-LEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
R LE L + G F G++ LK + +
Sbjct: 240 AFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHL 277
Score = 129 (50.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 39/177 (22%), Positives = 71/177 (40%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
+ + AF+G LR L L++N L S+ L + L + + +N S + L
Sbjct: 161 IRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKL 220
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
++ L+++ + L + AF + A +G+ L H++L+
Sbjct: 221 RVVEELKLSH-NPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLEN 279
Query: 513 NAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA-VFCNSPAPLK 568
N S + L T+ + NP +C C + LR L + + C SPA +
Sbjct: 280 NRLHQLP-SNFPFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSRPDATCASPAKFR 335
>UNIPROTKB|F1NG27 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002756 "MyD88-independent toll-like receptor signaling
pathway" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0032722 "positive regulation of
chemokine production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=IEA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IEA] [GO:0032760 "positive regulation of tumor
necrosis factor production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045356 "positive regulation of interferon-alpha
biosynthetic process" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:LNLGYNI EMBL:AADN02031435
IPI:IPI00590386 Ensembl:ENSGALT00000021952 Uniprot:F1NG27
Length = 900
Score = 221 (82.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 125/488 (25%), Positives = 194/488 (39%)
Query: 119 VEIFGQNRISRIDQACFE-GLTALRILYLDDNQLRSVPTPSFIYL-GM-LAELRVGLNVF 175
VE+ G+NR ++ C E TA++ L L +L + + L G L L + N
Sbjct: 235 VEL-GENRTKKL---CTELSDTAIQNLSLSHVKLSHINRLTLQGLQGTNLTVLNLSKNSL 290
Query: 176 TTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 235
+ + D +F L +L L+L + N+S + F GLS + L L ++ I L
Sbjct: 291 SVIEDDSFQWLSKLEYLNLEDNNIINVSSHLFYGLSSITHLNLINSLTGKIEDFSFQWLH 350
Query: 236 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS-NLTRVRKGAFADXXXXXXXXXXXX 294
LE L + N F + F GL LK L + + NL R+ F
Sbjct: 351 HLEYLIMDNNNFPRITTNMFTGLKNLKYLSLYNCNTNLQRITNKTFVSLANSRLQVLNLT 410
Query: 295 XXX-XXIEEGALVGLPNLYHLNLKENAFTS--FSESMLAWPELRTIDIAENP-----IEC 346
+E A L L L+L N + I ++ N E
Sbjct: 411 KTRISTVESEAFSSLGQLKILDLGLNEINQELTGHEFEGLNNIEYIYLSYNKNVTLRSES 470
Query: 347 GCNILWLREMLVRRNTSAVFCNSPA--PLKYKSLISLSAEDLGCAGAGLTNISDNAFRGL 404
+ LR++++R+ V CN+ A P + L +L+ D+ + + NI ++ F GL
Sbjct: 471 FIFVPSLRKLMLRK----VGCNNLAISPSPFHPLRNLTVLDI--SNNNIANIREDLFNGL 524
Query: 405 SGLRSLVLTDNRLQSI--------PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
L L L N L + P L + L L + NGF + FKGL LK
Sbjct: 525 HELDILNLQHNNLARLWKCANPGGPVLFLKDVPNLHILNLKSNGFDEIPVHVFKGLHQLK 584
Query: 457 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFT 516
L++ G++NL + F D +L LNL++N T
Sbjct: 585 DLDL-GSNNLNLLPATLFDDQT-------------------------SLNTLNLQKNLIT 618
Query: 517 SFSESML--AWPELRTIDIAENPIECGC-NILWLREML------VRRNTSAVFCNSPAPL 567
S E++ A+ LRT+++ NP +C C +I W L + S CN+P P
Sbjct: 619 SVEENVFGPAFKSLRTLEMDFNPFDCTCESIAWFASWLNDTQAYIPGLQSQYICNTP-P- 676
Query: 568 KYKSLISL 575
KY + L
Sbjct: 677 KYHGTLVL 684
Score = 219 (82.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 101/430 (23%), Positives = 165/430 (38%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N IS++ + L L+IL L+ NQL +P F L EL +G N+ D
Sbjct: 88 GYNIISKLKPGLCKNLPLLQILKLEHNQLHELPDGVFASCSNLTELNLGYNIIEVKND-P 146
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL--TRLEEL 240
F L L+ LDL L + + + L LR LVL N++ + + L L T L L
Sbjct: 147 FKTLENLNILDLSHNHLKSANLGLQQQLKNLRELVLYSNQITELNKEDLKFLSNTSLNSL 206
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGAS-NLTRVRKGAFADXXXXXXXXXXXXXXXXX 299
++ N GC + L L + R +K
Sbjct: 207 DLSSNPLKEFHTGCLHAIGNLFGLILNNVELGENRTKKLCTELSDTAIQNLSLSHVKLSH 266
Query: 300 IEEGALVGLP--NLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPI-ECGCNILWLRE 355
I L GL NL LNL +N+ + + W +L +++ +N I ++ +
Sbjct: 267 INRLTLQGLQGTNLTVLNLSKNSLSVIEDDSFQWLSKLEYLNLEDNNIINVSSHLFYGLS 326
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVL--T 413
+ N ++ L L E L I+ N F GL L+ L L
Sbjct: 327 SITHLNLINSLTGKIEDFSFQWLHHL--EYLIMDNNNFPRITTNMFTGLKNLKYLSLYNC 384
Query: 414 DNRLQSIPTKQLSKL--TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 471
+ LQ I K L +RL+ L + + S +E+ F L LK L++ G + + +
Sbjct: 385 NTNLQRITNKTFVSLANSRLQVLNLTKTRISTVESEAFSSLGQLKILDL-GLNEINQELT 443
Query: 472 GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTI 531
G + + ++ + +P+L L L++ + + S + LR +
Sbjct: 444 GHEFEGLNNIEYIYLSYNKNVTLRSESFIFVPSLRKLMLRKVGCNNLAISPSPFHPLRNL 503
Query: 532 ---DIAENPI 538
DI+ N I
Sbjct: 504 TVLDISNNNI 513
Score = 187 (70.9 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 115/466 (24%), Positives = 195/466 (41%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS----AIP-IY-LSLQHVDL--SHTT 79
S + E N + + SN S+ L LS+N +K + AI ++ L L +V+L + T
Sbjct: 184 SNQITELNKEDLKFLSNTSLNSLDLSSNPLKEFHTGCLHAIGNLFGLILNNVELGENRTK 243
Query: 80 WLIIPIGGFEPQE-KLVELQLNH-NKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEG 137
L + Q L ++L+H N+ Q + + ++ V +N +S I+ F+
Sbjct: 244 KLCTELSDTAIQNLSLSHVKLSHINRLTLQGLQGTNLT---VLNLSKNSLSVIEDDSFQW 300
Query: 138 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT-TLADGAFNGLGRLSALDLRG 196
L+ L L L+DN + +V + F L + L + +N T + D +F L L L +
Sbjct: 301 LSKLEYLNLEDNNIINVSSHLFYGLSSITHLNL-INSLTGKIEDFSFQWLHHLEYLIMDN 359
Query: 197 AGLTNISDNAFRGLSGLRSLVL--TDNRLQSIPTKQLSKL--TRLEELEIGQNGFSMLEA 252
I+ N F GL L+ L L + LQ I K L +RL+ L + + S +E+
Sbjct: 360 NNFPRITTNMFTGLKNLKYLSLYNCNTNLQRITNKTFVSLANSRLQVLNLTKTRISTVES 419
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
F L LK L++ G + + + G + + + + +P+L
Sbjct: 420 EAFSSLGQLKILDL-GLNEINQELTGHEFEGLNNIEYIYLSYNKNVTLRSESFIFVPSLR 478
Query: 313 HLNLKENAFTSFSESMLAWPELRTI---DIAENPIECGCNILWLREMLVRRNTSAVFCNS 369
L L++ + + S + LR + DI+ N NI +RE L N
Sbjct: 479 KLMLRKVGCNNLAISPSPFHPLRNLTVLDISNN------NIANIREDLFNGLHELDILN- 531
Query: 370 PAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
L++ +L L CA G + + + L L L N IP L
Sbjct: 532 ---LQHNNLARLWK----CANPGGPVLF---LKDVPNLHILNLKSNGFDEIPVHVFKGLH 581
Query: 430 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL-TRVRKGAF 474
+L++L++G N ++L A F + L L + NL T V + F
Sbjct: 582 QLKDLDLGSNNLNLLPATLFDDQTSLNTLNLQ--KNLITSVEENVF 625
Score = 161 (61.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 104/430 (24%), Positives = 169/430 (39%)
Query: 47 IQRLVLSTNRIKTV-----DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNH 101
+ + L NR K + D+AI LSL HV LSH L + G + L L L+
Sbjct: 232 LNNVELGENRTKKLCTELSDTAIQ-NLSLSHVKLSHINRLTLQ--GLQGTN-LTVLNLSK 287
Query: 102 NK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
N + +S N I + F GL+++ L L ++ + SF
Sbjct: 288 NSLSVIEDDSFQWLSKLEYLNLEDNNIINVSSHLFYGLSSITHLNLINSLTGKIEDFSFQ 347
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG--LTNISDNAFRGL--SGLRSL 216
+L L L + N F + F GL L L L L I++ F L S L+ L
Sbjct: 348 WLHHLEYLIMDNNNFPRITTNMFTGLKNLKYLSLYNCNTNLQRITNKTFVSLANSRLQVL 407
Query: 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC-FKGLSYLKRLEITGASNLTRV 275
LT R+ ++ ++ S L +L+ L++G N + G F+GL+ ++ + ++ N+T +
Sbjct: 408 NLTKTRISTVESEAFSSLGQLKILDLGLNEINQELTGHEFEGLNNIEYIYLSYNKNVT-L 466
Query: 276 RKGAFADXXXXXXXXXXXXX-XXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPE 333
R +F I L NL L++ N + E + E
Sbjct: 467 RSESFIFVPSLRKLMLRKVGCNNLAISPSPFHPLRNLTVLDISNNNIANIREDLFNGLHE 526
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPA-PLKY-KSLISLSAEDLGCAGA 391
L +++ N + LW C +P P+ + K + +L L
Sbjct: 527 LDILNLQHNNLAR----LWK-------------CANPGGPVLFLKDVPNLHI--LNLKSN 567
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF-K 450
G I + F+GL L+ L L N L +P T L L + +N + +E F
Sbjct: 568 GFDEIPVHVFKGLHQLKDLDLGSNNLNLLPATLFDDQTSLNTLNLQKNLITSVEENVFGP 627
Query: 451 GLSYLKRLEI 460
L+ LE+
Sbjct: 628 AFKSLRTLEM 637
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 113/464 (24%), Positives = 186/464 (40%)
Query: 25 RDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSA-IPIYLSLQHVDLSHTTWLII 83
R+ + L IPS +I L +S N++K +D + Y +L +++ + +
Sbjct: 36 RNTMADCSHLKLTQIPSDLPKNITGLDISHNQLKKLDPENLTEYSNLIYLNAGYNIISKL 95
Query: 84 PIGGFEPQEKLVELQLNHNK-H-FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTAL 141
G + L L+L HN+ H P + S + + + G N I + F+ L L
Sbjct: 96 KPGLCKNLPLLQILKLEHNQLHELPDGVFASCSNLTELNL-GYN-IIEVKNDPFKTLENL 153
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL--ADGAFNGLGRLSALDLRGAGL 199
IL L N L+S L L EL + N T L D F L++LDL L
Sbjct: 154 NILDLSHNHLKSANLGLQQQLKNLRELVLYSNQITELNKEDLKFLSNTSLNSLDLSSNPL 213
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
+ L L+L + L TK+L T L + I QN L K LS
Sbjct: 214 KEFHTGCLHAIGNLFGLILNNVELGENRTKKLC--TELSDTAI-QN----LSLSHVK-LS 265
Query: 260 YLKRLEITG--ASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLK 317
++ RL + G +NLT + + + + L + +N+
Sbjct: 266 HINRLTLQGLQGTNLTVLN-------LSKNSLSVIEDDSFQWLSKLEYLNLEDNNIINVS 318
Query: 318 ENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLR--EMLVRRNTS--AVFCNSPAPL 373
+ F S L I+ IE + WL E L+ N + + N L
Sbjct: 319 SHLFYGLSSIT----HLNLINSLTGKIE-DFSFQWLHHLEYLIMDNNNFPRITTNMFTGL 373
Query: 374 KYKSLISLSAEDLGCAGAGLTNISDNAFRGL--SGLRSLVLTDNRLQSIPTKQLSKLTRL 431
K +SL C L I++ F L S L+ L LT R+ ++ ++ S L +L
Sbjct: 374 KNLKYLSL----YNC-NTNLQRITNKTFVSLANSRLQVLNLTKTRISTVESEAFSSLGQL 428
Query: 432 EELEIGQNGFSMLEAGC-FKGLSYLKRLEITGASNLTRVRKGAF 474
+ L++G N + G F+GL+ ++ + ++ N+T +R +F
Sbjct: 429 KILDLGLNEINQELTGHEFEGLNNIEYIYLSYNKNVT-LRSESF 471
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 87/398 (21%), Positives = 140/398 (35%)
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 185
++++I + +T L I + NQL+ + + L L G N+ + L G
Sbjct: 46 KLTQIPSDLPKNITGLDISH---NQLKKLDPENLTEYSNLIYLNAGYNIISKLKPGLCKN 102
Query: 186 LGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
L L L L L + D F S L L L N ++ + L L L++ N
Sbjct: 103 LPLLQILKLEHNQLHELPDGVFASCSNLTELNLGYNIIE-VKNDPFKTLENLNILDLSHN 161
Query: 246 GFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX-XXXIEEGA 304
G + L L+ L + ++ +T + K G
Sbjct: 162 HLKSANLGLQQQLKNLREL-VLYSNQITELNKEDLKFLSNTSLNSLDLSSNPLKEFHTGC 220
Query: 305 LVGLPNLYHL-----NLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVR 359
L + NL+ L L EN L+ ++ + ++ + N L L+ +
Sbjct: 221 LHAIGNLFGLILNNVELGENRTKKLCTE-LSDTAIQNLSLSHVKLS-HINRLTLQGLQGT 278
Query: 360 RNTSAVFC-NSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL 417
T NS + ++ S LS E L + N+S + F GLS + L L ++
Sbjct: 279 NLTVLNLSKNSLSVIEDDSFQWLSKLEYLNLEDNNIINVSSHLFYGLSSITHLNLINSLT 338
Query: 418 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS-NLTRVRKGAFAD 476
I L LE L + N F + F GL LK L + + NL R+ F
Sbjct: 339 GKIEDFSFQWLHHLEYLIMDNNNFPRITTNMFTGLKNLKYLSLYNCNTNLQRITNKTFVS 398
Query: 477 XXXXXXXXXXXXXXX-XIIEEDALVGLPNLYHLNLKEN 513
+E +A L L L+L N
Sbjct: 399 LANSRLQVLNLTKTRISTVESEAFSSLGQLKILDLGLN 436
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 103/459 (22%), Positives = 165/459 (35%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISR 129
LQ + L H +P G F L EL L +N + + + N +
Sbjct: 106 LQILKLEHNQLHELPDGVFASCSNLTELNLGYNIIEVKNDPFKTLENLNILDLSHNHLKS 165
Query: 130 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG--MLAELRVGLNVFTTLADGAFNGLG 187
+ + L LR L L NQ+ + +L L L + N G + +G
Sbjct: 166 ANLGLQQQLKNLRELVLYSNQITELNKEDLKFLSNTSLNSLDLSSNPLKEFHTGCLHAIG 225
Query: 188 RLSALDLRGAGL---------TNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRL 237
L L L L T +SD A + LS L + L+ NRL T Q + T L
Sbjct: 226 NLFGLILNNVELGENRTKKLCTELSDTAIQNLS-LSHVKLSHINRL----TLQGLQGTNL 280
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 297
L + +N S++E F+ LS L+ L + +N+ V F
Sbjct: 281 TVLNLSKNSLSVIEDDSFQWLSKLEYLNLED-NNIINVSSHLFYGLSSITHLNLINSLTG 339
Query: 298 XXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREML 357
IE+ + L +L +L + N F + +M L+ + + C N+
Sbjct: 340 K-IEDFSFQWLHHLEYLIMDNNNFPRITTNMFTG--LKNLKYL-SLYNCNTNL------- 388
Query: 358 VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL 417
+R T+ F SL + + L ++ + AF L L+ L L N +
Sbjct: 389 -QRITNKTFV---------SLANSRLQVLNLTKTRISTVESEAFSSLGQLKILDLGLNEI 438
Query: 418 -QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI--TGASNLTRVRKGAF 474
Q + + L +E + + N L + F + L++L + G +NL + F
Sbjct: 439 NQELTGHEFEGLNNIEYIYLSYNKNVTLRSESFIFVPSLRKLMLRKVGCNNLA-ISPSPF 497
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN 513
I ED GL L LNL+ N
Sbjct: 498 HPLRNLTVLDISNNNIANI-REDLFNGLHELDILNLQHN 535
>UNIPROTKB|E1B8X9 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:HHRGPAL EMBL:DAAA02033829 EMBL:DAAA02033830 IPI:IPI00697816
Ensembl:ENSBTAT00000013364 Uniprot:E1B8X9
Length = 901
Score = 141 (54.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 51/185 (27%), Positives = 75/185 (40%)
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F +GL L L +NR+ I + LT L L + N L F GL L+ L +
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFL 488
Query: 267 TGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
NL R ++ G F D + G GL L LNL+ N FTS
Sbjct: 489 Q--YNLIREIQPGTF-DPVPNLQLLFLNNNLLQTLPSGVFSGL-TLLRLNLRSNHFTSLP 544
Query: 326 ESMLA--WPELRTIDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPAPLKYKSLI 379
S + L ID+ +NP +C C++ LW+ ++ V C +P +
Sbjct: 545 VSRVLDQLTSLIQIDLHDNPWDCTCDVVGMKLWVEQLKAGVLVDEVICKAPKKFAETDMR 604
Query: 380 SLSAE 384
S+ +E
Sbjct: 605 SIKSE 609
Score = 139 (54.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 65/249 (26%), Positives = 95/249 (38%)
Query: 341 ENPIECGCNI----LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
E P C CN+ L L R ++ P P K + L+ + L
Sbjct: 373 ECPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMY-LTENYIA-----LVRR 426
Query: 397 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
SD F +GL L L +NR+ I + LT L L + N L F GL L+
Sbjct: 427 SD--FLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQ 484
Query: 457 RLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAF 515
L + NL R ++ G F D + GL L LNL+ N F
Sbjct: 485 YLFLQ--YNLIREIQPGTF-DPVPNLQLLFLNNNLLQTLPSGVFSGL-TLLRLNLRSNHF 540
Query: 516 TSFSESMLA--WPELRTIDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPAPLKY 569
TS S + L ID+ +NP +C C++ LW+ ++ V C +P
Sbjct: 541 TSLPVSRVLDQLTSLIQIDLHDNPWDCTCDVVGMKLWVEQLKAGVLVDEVICKAPKKFAE 600
Query: 570 KSLISLSAE 578
+ S+ +E
Sbjct: 601 TDMRSIKSE 609
Score = 138 (53.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 41/124 (33%), Positives = 59/124 (47%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRIS I F LT LR LYL+ N++ + F L L L + N+ + G
Sbjct: 441 GNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQPGT 500
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L + F GL+ LR L L N S+P + L +LT L +++
Sbjct: 501 FDPVPNLQLLFLNNNLLQTLPSGVFSGLTLLR-LNLRSNHFTSLPVSRVLDQLTSLIQID 559
Query: 242 IGQN 245
+ N
Sbjct: 560 LHDN 563
Score = 134 (52.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 49/163 (30%), Positives = 73/163 (44%)
Query: 109 IVCSIISPRRVEIF----GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
I S ISP R I+ N +SR+ F T IL+L N ++ + T +F L
Sbjct: 71 ISLSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRG 130
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N L D F GL L L + ++ I NAF L L+ L+L DN L
Sbjct: 131 LRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLS 190
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEI 266
S+P L + L L++ N +L G + + + L++
Sbjct: 191 SLPNN-LFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQL 232
Score = 121 (47.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 35/119 (29%), Positives = 53/119 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+YL +N + V F+ L L +G N + + D AF L L L L G + +S
Sbjct: 414 MYLTENYIALVRRSDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLS 473
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
F GL L+ L L N ++ I + L+ L + N L +G F GL+ L+
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLTLLR 532
Score = 107 (42.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 46/199 (23%), Positives = 79/199 (39%)
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
L G L+ + N F +G L L N +Q I T L L L + N +L
Sbjct: 88 LSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDD 147
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYH 313
F GL L+ L++ + ++ + AF + +P L H
Sbjct: 148 TFLGLESLEYLQVD-YNYISVIEPNAFGKLHLLQVLILNDNLLSS-LPNNLFRFVP-LTH 204
Query: 314 LNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA----VFC 367
L+L+ N + + ++ + + ENP C C ++ L++ L + SA V C
Sbjct: 205 LDLRGNRLKLLPYVGLLQHMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVC 264
Query: 368 NSPAPLKYKSLISLSAEDL 386
+P L + L +S ++L
Sbjct: 265 ETPFRLHGRDLDEVSKQEL 283
Score = 84 (34.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHF 105
+Q L+L+ N + ++ + + ++ L H+DL ++P +G + +K+VELQL N
Sbjct: 179 LQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN--- 235
Query: 106 PQQIVCSIIS 115
P C +IS
Sbjct: 236 PWNCSCELIS 245
Score = 81 (33.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 37/174 (21%), Positives = 70/174 (40%)
Query: 369 SPAPLKYKSLIS--LSAEDLG----CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
SP PL+ + + L DLG C + +I++ + + + + LT+N + +
Sbjct: 368 SPVPLECPTACTCNLQISDLGLNVNCQERKIESIAELQPKPYNP-KKMYLTENYIALVRR 426
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
+ T L+ L +G N SM++ F L+ L+RL + G + + R+ F
Sbjct: 427 SDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNG-NRIERLSPELFYGLQSLQY 485
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAEN 536
I + +PNL L L N + + + L +++ N
Sbjct: 486 LFLQYNLIREI-QPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLTLLRLNLRSN 538
Score = 70 (29.7 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 32/119 (26%), Positives = 49/119 (41%)
Query: 47 IQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH- 104
I L+LS N + + + Y + L I G F L L LN+NK
Sbjct: 83 IYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 105 -FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ S +++ N IS I+ F L L++L L+DN L S+P F ++
Sbjct: 143 LLRDDTFLGLESLEYLQV-DYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFV 200
>UNIPROTKB|E1C125 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:AADN02013465 IPI:IPI00592627 RefSeq:XP_420266.3
Ensembl:ENSGALT00000011717 GeneID:422287 KEGG:gga:422287
Uniprot:E1C125
Length = 837
Score = 159 (61.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 39/124 (31%), Positives = 69/124 (55%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N++ I+ F GL+AL+ L+L++N+L+ + +F+ + L L+ N+ ++ GA
Sbjct: 91 GNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKSIERGA 150
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
FN L +L L L ++ + DN FR + L L + NR+Q +P L + R+ EL+
Sbjct: 151 FNKLHKLKVLILNDNLISFLPDNIFR-FASLTHLDIRGNRIQKLPYIGVLEHIGRIVELQ 209
Query: 242 IGQN 245
+ N
Sbjct: 210 LEDN 213
Score = 116 (45.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 39/124 (31%), Positives = 56/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRIS I F LT LR LYL+ NQ+ + F L L L + NV + G
Sbjct: 409 GSNRISAIRGEVFRNLTNLRRLYLNGNQIERLSPEMFAGLHNLQYLYLEYNVIKEILAGT 468
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L ++ F G + L L L +N +P L +L L +++
Sbjct: 469 FDLMPNLQLLYLNNNLLRSLPAYIFAG-APLARLNLRNNHFMYLPVSGVLDQLKSLTQID 527
Query: 242 IGQN 245
+ N
Sbjct: 528 LEGN 531
Score = 112 (44.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 52/206 (25%), Positives = 77/206 (37%)
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
L+A+ L G + ++ F GL L L NR+ +I + LT L L + N
Sbjct: 377 LNAKKLHVNGNYIKDVDTADFTEFEGLDLLHLGSNRISAIRGEVFRNLTNLRRLYLNGNQ 436
Query: 441 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALV 500
L F GL L+ L + + + + G F D +
Sbjct: 437 IERLSPEMFAGLHNLQYLYLE-YNVIKEILAGTF-DLMPNLQLLYLNNNLLRSLPAYIFA 494
Query: 501 GLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNI----LWLREMLVRR 554
G P L LNL+ N F S + L ID+ NP +C C++ LWL ++
Sbjct: 495 GAP-LARLNLRNNHFMYLPVSGVLDQLKSLTQIDLEGNPWDCTCDLVALKLWLEKLSEGI 553
Query: 555 NTSAVFCNSPAPLKYKSLISLSAEDL 580
+ C +P L SL E L
Sbjct: 554 VVKELKCETPVQFANIELRSLKNEIL 579
Score = 111 (44.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 44/195 (22%), Positives = 80/195 (41%)
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
N F + SL L +N+LQ+I L+ L++L + N +L A F G+ L+ L
Sbjct: 77 NTFLNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYL 136
Query: 265 EITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
+ NL + + +GAF + + + + +L HL+++ N
Sbjct: 137 QAD--YNLIKSIERGAF-NKLHKLKVLILNDNLISFLPDN-IFRFASLTHLDIRGNRIQK 192
Query: 324 FSE-SMLAW-PELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKS 377
+L + + + +NP C C++L WL M C +P+ L +
Sbjct: 193 LPYIGVLEHIGRIVELQLEDNPWNCTCDLLPLKAWLENMPYNIYIGEAICETPSDLYGRL 252
Query: 378 LISLSAEDLGCAGAG 392
L + ++L G G
Sbjct: 253 LKETNKQELCSMGTG 267
Score = 110 (43.8 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 50/201 (24%), Positives = 74/201 (36%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L + G + ++ F GL L L NR+ +I + LT L L + N L
Sbjct: 382 LHVNGNYIKDVDTADFTEFEGLDLLHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLS 441
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L + + + + G F D + G P L
Sbjct: 442 PEMFAGLHNLQYLYLE-YNVIKEILAGTF-DLMPNLQLLYLNNNLLRSLPAYIFAGAP-L 498
Query: 312 YHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNI----LWLREMLVRRNTSAV 365
LNL+ N F S + L ID+ NP +C C++ LWL ++ +
Sbjct: 499 ARLNLRNNHFMYLPVSGVLDQLKSLTQIDLEGNPWDCTCDLVALKLWLEKLSEGIVVKEL 558
Query: 366 FCNSPAPLKYKSLISLSAEDL 386
C +P L SL E L
Sbjct: 559 KCETPVQFANIELRSLKNEIL 579
Score = 104 (41.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 149 NQLRSVPTPS-FIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAF 207
N L + P+ F+ L++G N + GAF GL L L L L + + F
Sbjct: 68 NNLLIILYPNTFLNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTF 127
Query: 208 RGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 267
G+ L L N ++SI +KL +L+ L + N S L F+ S L L+I
Sbjct: 128 LGIENLEYLQADYNLIKSIERGAFNKLHKLKVLILNDNLISFLPDNIFRFAS-LTHLDIR 186
Query: 268 G 268
G
Sbjct: 187 G 187
Score = 103 (41.3 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 40/156 (25%), Positives = 68/156 (43%)
Query: 114 ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
++ +++ + G N I +D A F L +L+L N++ ++ F L L L + N
Sbjct: 377 LNAKKLHVNG-NYIKDVDTADFTEFEGLDLLHLGSNRISAIRGEVFRNLTNLRRLYLNGN 435
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L+ F GL L L L + I F + L+ L L +N L+S+P +
Sbjct: 436 QIERLSPEMFAGLHNLQYLYLEYNVIKEILAGTFDLMPNLQLLYLNNNLLRSLPAYIFAG 495
Query: 234 LTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEITG 268
L L + N F L +G L L ++++ G
Sbjct: 496 AP-LARLNLRNNHFMYLPVSGVLDQLKSLTQIDLEG 530
Score = 79 (32.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 31/134 (23%), Positives = 58/134 (43%)
Query: 65 PIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIF 122
P + + H++ + +I+ F V LQL +NK + + + +++ +
Sbjct: 56 PPWSNFYHLNFQNNLLIILYPNTFLNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHL- 114
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
N + + F G+ L L D N ++S+ +F L L L + N+ + L D
Sbjct: 115 NNNELKILRADTFLGIENLEYLQADYNLIKSIERGAFNKLHKLKVLILNDNLISFLPDNI 174
Query: 183 FNGLGRLSALDLRG 196
F L+ LD+RG
Sbjct: 175 FR-FASLTHLDIRG 187
Score = 66 (28.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHFPQQ 108
L+L+ N I + I + SL H+D+ +P IG E ++VELQL N P
Sbjct: 160 LILNDNLISFLPDNIFRFASLTHLDIRGNRIQKLPYIGVLEHIGRIVELQLEDN---PWN 216
Query: 109 IVCSII 114
C ++
Sbjct: 217 CTCDLL 222
>UNIPROTKB|F1RP61 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AEMK01182519 EMBL:CT963117 EMBL:CU041325
RefSeq:XP_003357919.1 Ensembl:ENSSSCT00000010403 GeneID:100155909
KEGG:ssc:100155909 Uniprot:F1RP61
Length = 964
Score = 143 (55.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 69/274 (25%), Positives = 111/274 (40%)
Query: 317 KENAFTSFSESMLAWPELRTIDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPAP 372
K+ ++++ S +A+ + + E P C CN+ L L R ++ P P
Sbjct: 351 KDLGYSNYGPS-IAYQTKSPVPL-ECPTACTCNLQISDLGLNVNCQERKIESIAELQPKP 408
Query: 373 LKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
K + L+ + L SD F +GL L L +NR+ I + LT L
Sbjct: 409 YNPKKMY-LTENYIA-----LVRRSD--FLEATGLDLLHLGNNRISMIQDRAFGDLTNLR 460
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXX 491
L + N L F GL L+ L + NL R ++ G F D
Sbjct: 461 RLYLNGNRIERLSPELFYGLQSLQYLFLQ--YNLIREIQPGTF-DPVPNLQLLFLNNNLL 517
Query: 492 XIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRT---IDIAENPIECGCNI---- 544
+ GL L LNL+ N FTS S + +L++ ID+ +NP +C C++
Sbjct: 518 QTMPSGVFSGL-TLLRLNLRSNHFTSLPVSGVL-DQLKSLIQIDLHDNPWDCTCDVVGMK 575
Query: 545 LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAE 578
LW+ ++ V V C +P + S+ +E
Sbjct: 576 LWVEQLKVGVLVDEVICKAPKKFAETDMRSIKSE 609
Score = 142 (55.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 52/186 (27%), Positives = 79/186 (42%)
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F +GL L L +NR+ I + LT L L + N L F GL L+ L +
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFL 488
Query: 267 TGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
NL R ++ G F D + G GL L LNL+ N FTS
Sbjct: 489 Q--YNLIREIQPGTF-DPVPNLQLLFLNNNLLQTMPSGVFSGL-TLLRLNLRSNHFTSLP 544
Query: 326 ESMLAWPELRT---IDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPAPLKYKSL 378
S + +L++ ID+ +NP +C C++ LW+ ++ V V C +P +
Sbjct: 545 VSGVL-DQLKSLIQIDLHDNPWDCTCDVVGMKLWVEQLKVGVLVDEVICKAPKKFAETDM 603
Query: 379 ISLSAE 384
S+ +E
Sbjct: 604 RSIKSE 609
Score = 130 (50.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 46/146 (31%), Positives = 66/146 (45%)
Query: 109 IVCSIISPRRVEIF----GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
I S ISP R I+ N ++R+ F T IL+L N ++ + T +F L
Sbjct: 71 ISLSEISPPRFPIYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRG 130
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N L D F GL L L + ++ I NAF L L+ L+L DN L
Sbjct: 131 LRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLS 190
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSML 250
S+P L + L L++ N +L
Sbjct: 191 SLPNN-LFRFVPLTHLDLRGNRLKLL 215
Score = 128 (50.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 40/124 (32%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRIS I F LT LR LYL+ N++ + F L L L + N+ + G
Sbjct: 441 GNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQPGT 500
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L + F GL+ LR L L N S+P L +L L +++
Sbjct: 501 FDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLDQLKSLIQID 559
Query: 242 IGQN 245
+ N
Sbjct: 560 LHDN 563
Score = 119 (46.9 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+YL +N + V F+ L L +G N + + D AF L L L L G + +S
Sbjct: 414 MYLTENYIALVRRSDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLS 473
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
F GL L+ L L N ++ I + L+ L + N + +G F GL+ L+
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQPGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR 532
Score = 110 (43.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 39/126 (30%), Positives = 55/126 (43%)
Query: 144 LYLDDNQLRSVPTPSFI-YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L N L + F+ Y G + L +G NV + GAF+GL L L L L +
Sbjct: 86 LLLSGNLLNRLYPNEFVNYTGA-SILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELL 144
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
D+ F GL L L + N + I KL L+ L + N S L F+ + L
Sbjct: 145 RDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-LT 203
Query: 263 RLEITG 268
L++ G
Sbjct: 204 HLDLRG 209
Score = 82 (33.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHF 105
+Q L+L+ N + ++ + + ++ L H+DL ++P +G + +K+VELQL N
Sbjct: 179 LQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLPYMGLLQHMDKVVELQLEEN--- 235
Query: 106 PQQIVCSIIS 115
P C +IS
Sbjct: 236 PWNCSCELIS 245
Score = 70 (29.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 32/119 (26%), Positives = 49/119 (41%)
Query: 47 IQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH- 104
I L+LS N + + + Y + L I G F L L LN+NK
Sbjct: 83 IYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 105 -FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ S +++ N IS I+ F L L++L L+DN L S+P F ++
Sbjct: 143 LLRDDTFLGLESLEYLQV-DYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFV 200
>UNIPROTKB|F1NEL3 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
[GO:0030539 "male genitalia development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0050673 "epithelial cell proliferation"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0072202 "cell differentiation involved in metanephros
development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0045892
GO:GO:0045893 InterPro:IPR003591 SMART:SM00369 GO:GO:0090190
GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 GeneTree:ENSGT00650000092962 OMA:DGYWSDC
EMBL:AADN02040116 EMBL:AADN02040117 EMBL:AADN02040118
EMBL:AADN02040119 IPI:IPI00595681 ProteinModelPortal:F1NEL3
Ensembl:ENSGALT00000019904 Uniprot:F1NEL3
Length = 1038
Score = 221 (82.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 104/410 (25%), Positives = 175/410 (42%)
Query: 62 SAIPIYLSL--QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
+A+P LS Q +D+S +P F+ L EL+L N F S + +
Sbjct: 132 AAVPPGLSAFTQALDVSMNNITRLPEDAFKNFPYLEELRLAGNDLSFIHPKALSGLKELK 191
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
V N++ + GL+ L+ L LD N + +VP SF L L L + N T +
Sbjct: 192 VLTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHLWLDDNSLTEV 251
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
+ L L AL L +T+I D AF LS L L L +N++++I L LE
Sbjct: 252 PIHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKHCFDGLDNLE 311
Query: 239 ELEIGQNGFSMLE-AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 297
L++ N +M+E K L LK L ++ ++ + GAFA
Sbjct: 312 TLDLNYN--NMVEFPEAIKALPNLKELAFH-SNYISIIPDGAFAGNPLLRMIHLYDNPLS 368
Query: 298 XXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC-GCNILWLREM 356
+ A L +L+ L ++ + ++ L ++ + I N+ ++M
Sbjct: 369 F-VGNSAFQNLSDLHSLVIRGASMVQRFPNLTGTVNLESLTLTGTKINSIPVNLCQEQKM 427
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNR 416
L R + N + SL E++ + I+D+ F+GLS LR L L+ NR
Sbjct: 428 L--RTLDLSYNNIKDLPSFTGCRSL--EEISLQHNQIHEITDDTFQGLSSLRILDLSRNR 483
Query: 417 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
+ I + + + + L++ N + + +GLS L +L++ G S L
Sbjct: 484 ICKIHKEAFTTIGAIVNLDLSFNELTSVPT---EGLSGLNQLKLAGNSEL 530
Score = 200 (75.5 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 91/401 (22%), Positives = 158/401 (39%)
Query: 73 VDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
VD S +P G + +++ +N+ P+ + + + G N +S I
Sbjct: 124 VDCSGRGLAAVP-PGLSAFTQALDVSMNNITRLPEDAFKNFPYLEELRLAG-NDLSFIHP 181
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
GL L++L L +NQL++VP + L L LR+ N T + +F GL +L L
Sbjct: 182 KALSGLKELKVLTLQNNQLKTVPNEAIRGLSGLQSLRLDANHITAVPKDSFEGLVQLRHL 241
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 252
L LT + + L L++L L N++ IP + L+ L L + N +
Sbjct: 242 WLDDNSLTEVPIHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGK 301
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
CF GL L+ L++ +N+ + A I +GA G P L
Sbjct: 302 HCFDGLDNLETLDLN-YNNMVEFPEAIKA--LPNLKELAFHSNYISIIPDGAFAGNPLLR 358
Query: 313 HLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAP 372
++L +N + S A+ L D+ I + + N ++
Sbjct: 359 MIHLYDNPLSFVGNS--AFQNLS--DLHSLVIRGASMVQRFPNLTGTVNLESLTLTGT-- 412
Query: 373 LKYKSL-ISLSAED--LGCAGAGLTNISD-NAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
K S+ ++L E L NI D +F G L + L N++ I L
Sbjct: 413 -KINSIPVNLCQEQKMLRTLDLSYNNIKDLPSFTGCRSLEEISLQHNQIHEITDDTFQGL 471
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 469
+ L L++ +N + F + + L+++ + LT V
Sbjct: 472 SSLRILDLSRNRICKIHKEAFTTIGAIVNLDLS-FNELTSV 511
Score = 191 (72.3 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 89/332 (26%), Positives = 142/332 (42%)
Query: 31 LQEANLDVIPSH--SN-PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIG 86
L + +L +P H SN PS+Q L L+ N+I + D A SL + L + I
Sbjct: 243 LDDNSLTEVPIHPLSNLPSLQALTLALNKITHIPDYAFTNLSSLVVLHLHNNKIKTIGKH 302
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEI-FGQNRISRIDQACFEGLTALRI 143
F+ + L L LN+N FP+ I P E+ F N IS I F G LR+
Sbjct: 303 CFDGLDNLETLDLNYNNMVEFPEAIKAL---PNLKELAFHSNYISIIPDGAFAGNPLLRM 359
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
++L DN L V +F L L L + G ++ + G L +L L G + +I
Sbjct: 360 IHLYDNPLSFVGNSAFQNLSDLHSLVIRGASMVQRFPN--LTGTVNLESLTLTGTKINSI 417
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
N + LR+L L+ N ++ +P+ + LEE+ + N + F+GLS L+
Sbjct: 418 PVNLCQEQKMLRTLDLSYNNIKDLPS--FTGCRSLEEISLQHNQIHEITDDTFQGLSSLR 475
Query: 263 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFT 322
L+++ + + ++ K AF EG L L L L N+
Sbjct: 476 ILDLS-RNRICKIHKEAFTTIGAIVNLDLSFNELTSVPTEG----LSGLNQLKLAGNS-- 528
Query: 323 SFSESMLA--WPELRTIDIAENPIECGCNILW 352
E++ A + +LR++ + P C W
Sbjct: 529 ELKEALAAQNFAKLRSLSV---PYAYQCCAFW 557
>WB|WBGene00019351 [details] [associations]
symbol:lron-7 species:6239 "Caenorhabditis elegans"
[GO:0004623 "phospholipase A2 activity" evidence=IEA] [GO:0006644
"phospholipid metabolic process" evidence=IEA] [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:FO081579 GeneID:180991 KEGG:cel:CELE_K03A1.2
CTD:180991 GeneTree:ENSGT00690000102720 PIR:T34319
RefSeq:NP_509227.2 ProteinModelPortal:Q21164 SMR:Q21164
STRING:Q21164 PRIDE:Q21164 EnsemblMetazoa:K03A1.2a.1
EnsemblMetazoa:K03A1.2a.2 UCSC:K03A1.2b.1 WormBase:K03A1.2a
HOGENOM:HOG000004765 InParanoid:Q21164 OMA:EIRDHAF NextBio:911890
ArrayExpress:Q21164 Uniprot:Q21164
Length = 586
Score = 172 (65.6 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 76/298 (25%), Positives = 121/298 (40%)
Query: 26 DPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPI 85
D S Q N D P + + + I T++S P YL V + + PI
Sbjct: 126 DDSNEYQACNADTSPDNELCHCDVHEIDCSEI-TMESGDP-YLRTLDVAIMKKDFE--PI 181
Query: 86 GGFEPQEKLVELQLNHNKHFPQ-QIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
+ K+ LQ ++K P+ + SI+ N I ID F+ T L L
Sbjct: 182 TAKFTKNKISRLQ--NDKVLPKFEKFVSILD------VSYNEIRFIDNDVFKPFTNLTKL 233
Query: 145 YLDDNQLRSVPTPSF-IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
YL N L++V F L L +G N ++D +F+ L +L L L G +
Sbjct: 234 YLSHNVLQTVKKDVFDAAKNTLHRLDLGYNRIKVVSDNSFDTLSKLKVLSLDGNPIKAWR 293
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
F+GL L L L + ++++P L +L +L + +N + A L LK
Sbjct: 294 KEMFKGLDSLEELSLDNCNIENLPADIFEYLPKLVKLSLRENPLEEIPA-VVAHLKSLKD 352
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
++++ +NLT +R AFA + + GLP L L L +N +
Sbjct: 353 IDLS-VTNLTEIRDHAFAGDSDLEEIILEKMPFLTVVRDCGFCGLPQLKTLILNDNKY 409
Score = 167 (63.8 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 76/356 (21%), Positives = 139/356 (39%)
Query: 88 FEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGL-TALRILYL 146
FE ++++ N + + + ++ + N + + + F+ L L L
Sbjct: 202 FEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYL-SHNVLQTVKKDVFDAAKNTLHRLDL 260
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
N+++ V SF L L L + N F GL L L L + N+ +
Sbjct: 261 GYNRIKVVSDNSFDTLSKLKVLSLDGNPIKAWRKEMFKGLDSLEELSLDNCNIENLPADI 320
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F L L L L +N L+ IP ++ L L+++++ + + F G S L+ + +
Sbjct: 321 FEYLPKLVKLSLRENPLEEIPAV-VAHLKSLKDIDLSVTNLTEIRDHAFAGDSDLEEIIL 379
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA---LVGLPN-----LYHLNLKE 318
LT VR F + A + P + L +
Sbjct: 380 EKMPFLTVVRDCGFCGLPQLKTLILNDNKYLQELHPNAFGYIKSQPGHKSAAITSLQIHN 439
Query: 319 NAFTSFSESMLAWPELRTIDIAENPIECGCNILWLRE--MLVRRNTSAVFCNSPAPLKYK 376
+ ++ SE M+ + L+T + NP C C+ ++ E ++++ A C SPA L +
Sbjct: 440 SNISTISEHMVDYDNLKTFQVGGNPWNCNCDTQFMLEEKFAFKQDSVAPKCTSPAGLNGR 499
Query: 377 SLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLV--LTDNRLQSIPTKQLSKLTR 430
L+++ A D C A S F + GL LV + + + +L +L R
Sbjct: 500 LLVTVRASD-ACEDARFLGRSGR-FSSVLGLALLVGFIAIGTYYMVSSGKLERLVR 553
Score = 102 (41.0 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 29/115 (25%), Positives = 51/115 (44%)
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
F+GL L L L + ++++P L +L +L + +N + A L LK +++
Sbjct: 297 FKGLDSLEELSLDNCNIENLPADIFEYLPKLVKLSLRENPLEEIPA-VVAHLKSLKDIDL 355
Query: 461 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAF 515
+ +NLT +R AFA ++ + GLP L L L +N +
Sbjct: 356 S-VTNLTEIRDHAFAGDSDLEEIILEKMPFLTVVRDCGFCGLPQLKTLILNDNKY 409
Score = 93 (37.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 508 LNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLRE--MLVRRNTSAVFCNSPA 565
L + + ++ SE M+ + L+T + NP C C+ ++ E ++++ A C SPA
Sbjct: 435 LQIHNSNISTISEHMVDYDNLKTFQVGGNPWNCNCDTQFMLEEKFAFKQDSVAPKCTSPA 494
Query: 566 PLKYKSLISLSAED 579
L + L+++ A D
Sbjct: 495 GLNGRLLVTVRASD 508
>UNIPROTKB|E2QXQ1 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AAEX03013291 RefSeq:XP_849372.1
Ensembl:ENSCAFT00000008533 GeneID:485513 KEGG:cfa:485513
NextBio:20859499 Uniprot:E2QXQ1
Length = 958
Score = 143 (55.4 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 52/186 (27%), Positives = 79/186 (42%)
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F +GL L L +NR+ I + LT L L + N L F GL L+ L +
Sbjct: 429 FLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFL 488
Query: 267 TGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
NL R ++ G F D + G GL L LNL+ N FTS
Sbjct: 489 Q--YNLIREIQSGTF-DPVPNLQLLFLNNNLLQTMPSGVFSGL-TLLRLNLRSNHFTSLP 544
Query: 326 ESMLAWPELRT---IDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPAPLKYKSL 378
S + +L++ ID+ +NP +C C++ LW+ ++ V V C +P +
Sbjct: 545 VSGVL-DQLKSLIQIDLHDNPWDCTCDVVGMKLWVEQLKVGVLVDEVICKAPKKFAETDM 603
Query: 379 ISLSAE 384
S+ +E
Sbjct: 604 RSIKSE 609
Score = 141 (54.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 68/274 (24%), Positives = 111/274 (40%)
Query: 317 KENAFTSFSESMLAWPELRTIDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPAP 372
K+ ++++ S +A+ + + E P C CN+ L L R ++ P P
Sbjct: 351 KDLGYSNYGPS-IAYQTKSPVPL-ECPTACTCNLQISDLGLNVNCQERKIESIAELQPKP 408
Query: 373 LKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
K + L+ + + SD F +GL L L +NR+ I + LT L
Sbjct: 409 YNPKKMY-LTENYIA-----VVRRSD--FLEATGLDLLHLGNNRISMIQDRAFGDLTNLR 460
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXX 491
L + N L F GL L+ L + NL R ++ G F D
Sbjct: 461 RLYLNGNRIERLSPELFYGLQSLQYLFLQ--YNLIREIQSGTF-DPVPNLQLLFLNNNLL 517
Query: 492 XIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRT---IDIAENPIECGCNI---- 544
+ GL L LNL+ N FTS S + +L++ ID+ +NP +C C++
Sbjct: 518 QTMPSGVFSGL-TLLRLNLRSNHFTSLPVSGVL-DQLKSLIQIDLHDNPWDCTCDVVGMK 575
Query: 545 LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAE 578
LW+ ++ V V C +P + S+ +E
Sbjct: 576 LWVEQLKVGVLVDEVICKAPKKFAETDMRSIKSE 609
Score = 131 (51.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 48/163 (29%), Positives = 73/163 (44%)
Query: 109 IVCSIISPRRVEIF----GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
I S ISP R I+ N ++R+ F T IL+L N ++ + T +F L
Sbjct: 71 ISLSEISPPRFPIYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRG 130
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N L D F GL L L + ++ I NAF L L+ L+L DN L
Sbjct: 131 LRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLS 190
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEI 266
S+P L + L L++ N +L G + + + L++
Sbjct: 191 SLPNN-LFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQL 232
Score = 129 (50.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 40/124 (32%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRIS I F LT LR LYL+ N++ + F L L L + N+ + G
Sbjct: 441 GNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGT 500
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L + F GL+ LR L L N S+P L +L L +++
Sbjct: 501 FDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVLDQLKSLIQID 559
Query: 242 IGQN 245
+ N
Sbjct: 560 LHDN 563
Score = 121 (47.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+YL +N + V F+ L L +G N + + D AF L L L L G + +S
Sbjct: 414 MYLTENYIAVVRRSDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLS 473
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
F GL L+ L L N ++ I + + L+ L + N + +G F GL+ L+
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR 532
Score = 88 (36.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 35/160 (21%), Positives = 64/160 (40%)
Query: 189 LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248
L L L ++ I D AF L+ LR L L NR++ + + L L+ L + N
Sbjct: 435 LDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIR 494
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
+++G F + L+ L + + L + G F+ + G L L
Sbjct: 495 EIQSGTFDPVPNLQLLFLNN-NLLQTMPSGVFSGLTLLRLNLRSNHFTSLPVS-GVLDQL 552
Query: 309 PNLYHLNLKENAFTSFSE--SMLAWPELRTIDIAENPIEC 346
+L ++L +N + + M W E + + + + C
Sbjct: 553 KSLIQIDLHDNPWDCTCDVVGMKLWVEQLKVGVLVDEVIC 592
Score = 84 (34.6 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHF 105
+Q L+L+ N + ++ + + ++ L H+DL ++P +G + +K+VELQL N
Sbjct: 179 LQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN--- 235
Query: 106 PQQIVCSIIS 115
P C +IS
Sbjct: 236 PWNCSCELIS 245
Score = 70 (29.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 32/119 (26%), Positives = 49/119 (41%)
Query: 47 IQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH- 104
I L+LS N + + + Y + L I G F L L LN+NK
Sbjct: 83 IYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 105 -FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ S +++ N IS I+ F L L++L L+DN L S+P F ++
Sbjct: 143 LLRDDTFLGLESLEYLQV-DYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFV 200
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 220 (82.5 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 97/424 (22%), Positives = 175/424 (41%)
Query: 111 CSIISPRRVEIFGQNRISRIDQACFEGLTAL-RILYLDDNQLRSVPTPSFIYLGMLAELR 169
CS RRV+ G+ ++ + EGL+A ++L + N + +P +F L ELR
Sbjct: 116 CSCDGDRRVDCSGKG-LTAVP----EGLSAFTQLLDISMNNITQLPEDAFKNFPFLEELR 170
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+ N + + A +GL L L L+ L + A RGLS L+SL L N + S+P
Sbjct: 171 LAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPED 230
Query: 230 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 289
LT+L L + N + + L L+ L + + ++ + AF +
Sbjct: 231 SFEGLTQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLA-LNKISSIPDFAFTNLSSLVVL 289
Query: 290 XXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCN 349
+ + GL NL L+L N F +++ A P L+ + N I +
Sbjct: 290 HLHNNKIKS-LGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSNSISVIPD 348
Query: 350 ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLR 408
+ L++ T ++ N + + + +LS L GA + N G L
Sbjct: 349 GAFDGNPLLK--TIHLYDNPLSFVGNSAFHNLSELHSLVIRGASMVQRFPN-LTGTVRLE 405
Query: 409 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 468
SL LT ++ SI + RL L++ N L + F G L+ + + + + +
Sbjct: 406 SLTLTGTKISSISNNLCQEQKRLRTLDLSYNSIKDLPS--FNGCHALEEISLQ-RNQIHQ 462
Query: 469 VRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAWPE 527
+++ F I ++ A L ++ +L++ N TSF +E + +
Sbjct: 463 IKEDTFQGLTSLKILDLSRNLIHEI-DDRAFAKLGSITNLDVSFNELTSFPTEGLNGLNQ 521
Query: 528 LRTI 531
L+ +
Sbjct: 522 LKLV 525
Score = 219 (82.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 96/396 (24%), Positives = 167/396 (42%)
Query: 71 QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRI 130
+ VD S +P G +L+++ +N+ P+ + + + G N +S I
Sbjct: 122 RRVDCSGKGLTAVP-EGLSAFTQLLDISMNNITQLPEDAFKNFPFLEELRLAG-NDLSFI 179
Query: 131 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 190
GL L++L L +NQL++VP+ + L L LR+ N T++ + +F GL +L
Sbjct: 180 HPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLR 239
Query: 191 ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L L LT + + L L++L L N++ SIP + L+ L L + N L
Sbjct: 240 HLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSL 299
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
CF GL L+ L++ +NL + A I +GA G P
Sbjct: 300 GQHCFDGLDNLETLDLN-YNNLGEFPQAIKA--LPSLKELLFHSNSISVIPDGAFDGNPL 356
Query: 311 LYHLNLKENAFTSFSESMLA-WPELRTIDI-AENPIECGCNILW-LR-EMLVRRNTSAVF 366
L ++L +N + S EL ++ I + ++ N+ +R E L T
Sbjct: 357 LKTIHLYDNPLSFVGNSAFHNLSELHSLVIRGASMVQRFPNLTGTVRLESLTLTGTKISS 416
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISD-NAFRGLSGLRSLVLTDNRLQSIPTKQL 425
++ + K L +L DL +I D +F G L + L N++ I
Sbjct: 417 ISNNLCQEQKRLRTL---DLS-----YNSIKDLPSFNGCHALEEISLQRNQIHQIKEDTF 468
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
LT L+ L++ +N ++ F L + L+++
Sbjct: 469 QGLTSLKILDLSRNLIHEIDDRAFAKLGSITNLDVS 504
Score = 214 (80.4 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 99/405 (24%), Positives = 172/405 (42%)
Query: 62 SAIPIYLSL--QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
+A+P LS Q +D+S +P F+ L EL+L N F S + +
Sbjct: 132 TAVPEGLSAFTQLLDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELK 191
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
V N++ + GL++L+ L LD N + SVP SF L L L + N T +
Sbjct: 192 VLTLQNNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNSLTEV 251
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
+ L L AL L +++I D AF LS L L L +N+++S+ L LE
Sbjct: 252 PVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLE 311
Query: 239 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
L++ N K L LK L + +++++ + GAF D
Sbjct: 312 TLDLNYNNLGEFPQA-IKALPSLKEL-LFHSNSISVIPDGAF-DGNPLLKTIHLYDNPLS 368
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+ A L L+ L ++ + ++ L ++ + I N L + +
Sbjct: 369 FVGNSAFHNLSELHSLVIRGASMVQRFPNLTGTVRLESLTLTGTKISSISNNLCQEQKRL 428
Query: 359 RRNTSAVFCNSPAPL-KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL 417
R T + NS L + +L E++ + I ++ F+GL+ L+ L L+ N +
Sbjct: 429 R--TLDLSYNSIKDLPSFNGCHAL--EEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLI 484
Query: 418 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
I + +KL + L++ F+ L + +GL+ L +L++ G
Sbjct: 485 HEIDDRAFAKLGSITNLDVS---FNELTSFPTEGLNGLNQLKLVG 526
Score = 202 (76.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 93/342 (27%), Positives = 153/342 (44%)
Query: 31 LQEANLDVIPSH--SN-PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIG 86
L + +L +P H SN P++Q L L+ N+I ++ D A SL + L + +
Sbjct: 243 LDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQH 302
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F+ + L L LN+N FPQ I ++ S + + +F N IS I F+G L+ +
Sbjct: 303 CFDGLDNLETLDLNYNNLGEFPQAIK-ALPSLKEL-LFHSNSISVIPDGAFDGNPLLKTI 360
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+L DN L V +F L L L + G ++ + G RL +L L G +++IS
Sbjct: 361 HLYDNPLSFVGNSAFHNLSELHSLVIRGASMVQRFPN--LTGTVRLESLTLTGTKISSIS 418
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+N + LR+L L+ N ++ +P+ + LEE+ + +N ++ F+GL+ LK
Sbjct: 419 NNLCQEQKRLRTLDLSYNSIKDLPS--FNGCHALEEISLQRNQIHQIKEDTFQGLTSLKI 476
Query: 264 LEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFT 322
L+++ NL + AFA EG L L L L N F
Sbjct: 477 LDLS--RNLIHEIDDRAFAKLGSITNLDVSFNELTSFPTEG----LNGLNQLKLVGN-F- 528
Query: 323 SFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNT 362
E++ A + LR++ + P C W + NT
Sbjct: 529 KLKEALAAKDFVNLRSLSV---PYAYQCCAFWGCDSYTHSNT 567
Score = 162 (62.1 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 89/381 (23%), Positives = 153/381 (40%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + +N T L + AF L L L G L+ I A GL L+ L L +N+L+++P
Sbjct: 145 LDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQLKTVP 204
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 287
++ + L+ L+ L + N + + F+GL+ L+ L + S LT V ++
Sbjct: 205 SEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLDDNS-LTEVPVHPLSNLPTLQ 263
Query: 288 XXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPI-- 344
I + A L +L L+L N S + L T+D+ N +
Sbjct: 264 ALTLALNKISS-IPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDNLETLDLNYNNLGE 322
Query: 345 --ECGCNILWLREMLVRRNTSAVFCNSPA---PLKYKSLISLSAEDLGCAGAGLTNISDN 399
+ + L+E+L N+ +V + PL K+ I L L G ++
Sbjct: 323 FPQAIKALPSLKELLFHSNSISVIPDGAFDGNPL-LKT-IHLYDNPLSFVG-------NS 373
Query: 400 AFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
AF LS L SLV+ + +Q P L+ RLE L + S + + L+ L
Sbjct: 374 AFHNLSELHSLVIRGASMVQRFPN--LTGTVRLESLTLTGTKISSISNNLCQEQKRLRTL 431
Query: 459 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF 518
+++ S ++ + I+ED GL +L L+L N
Sbjct: 432 DLSYNS----IKDLPSFNGCHALEEISLQRNQIHQIKEDTFQGLTSLKILDLSRNLIHEI 487
Query: 519 SESMLA-WPELRTIDIAENPI 538
+ A + +D++ N +
Sbjct: 488 DDRAFAKLGSITNLDVSFNEL 508
Score = 149 (57.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 65/221 (29%), Positives = 100/221 (45%)
Query: 50 LVLSTNRIKTVDS-AIPIYLSLQ--HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--H 104
L L N++KTV S AI SLQ +D +H T +P FE +L L L+ N
Sbjct: 193 LTLQNNQLKTVPSEAIRGLSSLQSLRLDANHIT--SVPEDSFEGLTQLRHLWLDDNSLTE 250
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
P + ++ + + + + N+IS I F L++L +L+L +N+++S+ F L
Sbjct: 251 VPVHPLSNLPTLQALTL-ALNKISSIPDFAFTNLSSLVVLHLHNNKIKSLGQHCFDGLDN 309
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N A L L L ++ I D AF G L+++ L DN L
Sbjct: 310 LETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLKTIHLYDNPLS 368
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
+ L+ L L I G SM++ F L+ RLE
Sbjct: 369 FVGNSAFHNLSELHSLVI--RGASMVQR--FPNLTGTVRLE 405
Score = 38 (18.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTD 414
GC +N DN+ + SG + L+D
Sbjct: 558 GCDSYTHSNTEDNSLQDHSGSKDKGLSD 585
>ZFIN|ZDB-GENE-040220-5 [details] [associations]
symbol:tlr22 "toll-like receptor 22" species:7955
"Danio rerio" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
ZFIN:ZDB-GENE-040220-5 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 InterPro:IPR025875 Pfam:PF12799 GO:GO:0052033
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 EMBL:BC163527
IPI:IPI00898178 RefSeq:NP_001122147.1 UniGene:Dr.30190
ProteinModelPortal:B3DJL6 STRING:B3DJL6 GeneID:403135
KEGG:dre:403135 CTD:403135 HOVERGEN:HBG055859 NextBio:20816896
Uniprot:B3DJL6
Length = 947
Score = 219 (82.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 117/553 (21%), Positives = 218/553 (39%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHT------TWLIIPIGGFEPQEKLVELQL 99
S++RL LS NR I+ +L H+DLS+ W + + L + +
Sbjct: 205 SLKRLDLSNNRFAAFQLTNNIFPTLNHLDLSYCGHNGTMAWNVTEKSYLASVKTLYFMDV 264
Query: 100 NHNKHFPQQIVCSIISP-RRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 158
N + ++ S + ++ + G R+++ LR+L L +++ +
Sbjct: 265 NMSIQTADNVLQSFNNTLNKIRLNGNVRLNKTSLLLSVCSPMLRVLRLIATKIKHLTNHM 324
Query: 159 FIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVL 218
F L+EL +G N + L+ F G +L L L+ LT ++ N+F+ L+ L + L
Sbjct: 325 FDPCSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQINKLTRVT-NSFQILTSLEFIDL 383
Query: 219 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
+ N + + + LT+++ L + N S + + FK L L+ L + G +NL ++
Sbjct: 384 SRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLKSLEVLRL-GTNNLLKI-DD 441
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTI 337
F++ I+ LP L +L+L++N + E L ++
Sbjct: 442 VFSNGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGYAFGGLENLTSL 501
Query: 338 DIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNIS 397
++ N I G + + N VF P ++L L A + A +
Sbjct: 502 FLSSNKIT-G------KTLTTHPN---VFSGMP---NLQNL-DLFANSISFA---YDKLK 544
Query: 398 DNAFRGLSGLRSLVLTDNR--LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 455
F+ L LR L L R + +P+ L L+ L+ IG + L F L
Sbjct: 545 YPLFKDLKNLRELSLYSQRRGIGQLPSNLLEGLSSLQMFYIGNTNLNQLNPNLFNFTPQL 604
Query: 456 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEE-DALVG--LPNLYHLNLKE 512
L+++ N R + + + L+G L L L
Sbjct: 605 WFLDLS--KNALREDDAIPPELFHPIPNLTKLIISRTQLRSLNFLLGANLNKLSTLRASG 662
Query: 513 NAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF------CNSPA 565
N S +E+++ + P L +D+ N C CN + + + ++ V+ C+ P
Sbjct: 663 NEIDSVNETLIKSLPRLAVLDLQNNTFTCDCNNAFFIDWAKKNESTQVYYLSRYTCSYPR 722
Query: 566 PLKYKSLISLSAE 578
L+ SL + +
Sbjct: 723 TLRGTSLAEFNTD 735
Score = 140 (54.3 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 74/313 (23%), Positives = 122/313 (38%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N F + N L L L++ ++ I D AF L L L L NRL ++
Sbjct: 63 LDISFNSFAQIQIEDLNILLNLQYLNVSNNKISKIQDGAFGSLFNLTDLNLASNRLNAVS 122
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR--KGAFADXXX 285
L LT L L + +N S+++ F L L+ L ++ ++L + K A
Sbjct: 123 NGMLRGLTNLLVLRLDRNYISVIKESAFSTLHSLQVLNLS-KNHLRHIDDVKPVLASLYL 181
Query: 286 XXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIE 345
E + L +L L+L N F +F + +P L +D++
Sbjct: 182 EELYIGSNYFNVFNSSELSTKPL-SLKRLDLSNNRFAAFQLTNNIFPTLNHLDLSY---- 236
Query: 346 CGCN--ILW-LREMLVRRNTSAVF---CNSPAPLKYKSLISLS--AEDLGCAGAGLTNIS 397
CG N + W + E + ++ N L S + + G N +
Sbjct: 237 CGHNGTMAWNVTEKSYLASVKTLYFMDVNMSIQTADNVLQSFNNTLNKIRLNGNVRLNKT 296
Query: 398 DNAFRGLSG-LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
S LR L L +++ + + L EL++G N S L F+G LK
Sbjct: 297 SLLLSVCSPMLRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQLK 356
Query: 457 RLEITGASNLTRV 469
+L++ + LTRV
Sbjct: 357 KLQLQ-INKLTRV 368
Score = 129 (50.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 61/242 (25%), Positives = 102/242 (42%)
Query: 30 NLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGF 88
N++ ++ S +P ++ L L +IK + + + S L +DL + F
Sbjct: 290 NVRLNKTSLLLSVCSPMLRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMF 349
Query: 89 EPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDD 148
++L +LQL NK I++ +N I ++ F LT ++ LYL
Sbjct: 350 RGFKQLKKLQLQINKLTRVTNSFQILTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYS 409
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
N++ S+ + F L L LR+G N + D NG L L L L+ I + F
Sbjct: 410 NKISSIRSCLFKDLKSLEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKSHTFG 469
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN---GFSML-EAGCFKGLSYLKRL 264
L L +L L DN++ I L L L + N G ++ F G+ L+ L
Sbjct: 470 NLPQLNNLSLEDNQISEIEGYAFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNL 529
Query: 265 EI 266
++
Sbjct: 530 DL 531
Score = 44 (20.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 417 LQSIPTKQLSKLTRLEEL 434
L+ IPT QLS RL +L
Sbjct: 890 LEDIPTHQLSPYHRLRKL 907
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 216 (81.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 90/362 (24%), Positives = 153/362 (42%)
Query: 23 STRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI-YLSLQHVDLSHTTWL 81
S ++ S + L IP + L LS NR+K+V+ I Y L+ +DLS
Sbjct: 35 SAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIA 94
Query: 82 IIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLT 139
+ G F L L+L N K P + + + +++I +N+I + F+ L
Sbjct: 95 NVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDI-SENKIVILLDYMFQDLH 153
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
L+ L + DN L + +F L L +L + T + A + L L +L L+ +
Sbjct: 154 NLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNI 213
Query: 200 TNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
N+ AF+ L L+ L + L +P L L L L + S + FK L
Sbjct: 214 NNMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLN-LTSLSVTNTNLSTVPFLAFKHL 272
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
YL L ++ + ++ + G F+D IE + GL L LN+ +
Sbjct: 273 VYLTHLNLS-YNPISTIEAGMFSDLIRLQELHIVGAQLRT-IEPHSFQGLRFLRVLNVSQ 330
Query: 319 NAFTSFSESMLAWPE-LRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCNSPAPLKY 375
N + E++ + P L + I NP+ C C +LW+ R+ ++ C P ++
Sbjct: 331 NLLETLEENVFSSPRALEVLSINNNPLACDCRLLWILQRQPTLQFGGQQPMCAGPDTIRE 390
Query: 376 KS 377
+S
Sbjct: 391 RS 392
Score = 167 (63.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 80/361 (22%), Positives = 150/361 (41%)
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
RL +IP + + T++ L++ +N + F L+ ++++ + + V GAF
Sbjct: 47 RLIAIP-EGIPIETKI--LDLSKNRLKSVNPEEFISYPLLEEIDLSD-NIIANVEPGAF- 101
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIA 340
+ + G GL NL L++ EN + M L+++++
Sbjct: 102 NNLFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVG 161
Query: 341 ENPI-----ECGCNILWLREMLVRR-NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
+N + +L L ++ + + N +AV + + L+ SLISL + L +
Sbjct: 162 DNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLR--SLISLHLKHLN-----IN 214
Query: 395 NISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 453
N+ AF+ L L+ L + L +P L L L L + S + FK L
Sbjct: 215 NMPVYAFKRLFHLKHLEIDYWPLLDMMPANSLYGLN-LTSLSVTNTNLSTVPFLAFKHLV 273
Query: 454 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN 513
YL L ++ + ++ + G F+D I E + GL L LN+ +N
Sbjct: 274 YLTHLNLS-YNPISTIEAGMFSDLIRLQELHIVGAQLRTI-EPHSFQGLRFLRVLNVSQN 331
Query: 514 AFTSFSESMLAWPE-LRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCNSPAPLKYK 570
+ E++ + P L + I NP+ C C +LW+ R+ ++ C P ++ +
Sbjct: 332 LLETLEENVFSSPRALEVLSINNNPLACDCRLLWILQRQPTLQFGGQQPMCAGPDTIRER 391
Query: 571 S 571
S
Sbjct: 392 S 392
Score = 138 (53.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 63/254 (24%), Positives = 103/254 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
L L+ NRL+S+ ++ LEE+++ N + +E G F L L+ L + G + L V
Sbjct: 62 LDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKG-NRLKLV 120
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE----SMLAW 331
G F ++ L NL L + +N S +L+
Sbjct: 121 PLGVFTGLSNLTKLDISENKIVILLDY-MFQDLHNLKSLEVGDNDLVYISHRAFSGLLSL 179
Query: 332 PEL--RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
+L ++ P E + LR L+ + + N+ +K L L ++
Sbjct: 180 EQLTLEKCNLTAVPTEA---LSHLRS-LISLHLKHLNINNMPVYAFKRLFHLKHLEIDYW 235
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
L + N+ GL+ L SL +T+ L ++P L L L + N S +EAG F
Sbjct: 236 PL-LDMMPANSLYGLN-LTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMF 293
Query: 450 KGLSYLKRLEITGA 463
L L+ L I GA
Sbjct: 294 SDLIRLQELHIVGA 307
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 65/276 (23%), Positives = 114/276 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL L +++ F L + L+DN + ++ + L L L + N ++
Sbjct: 62 LDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVP 121
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 122 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLHNLKSLEVGDNDLVY-ISHRAFSGLLSL 179
Query: 312 YHLNLKENAFTSF-SESM-----LAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 365
L L++ T+ +E++ L L+ ++I P+ + L+ + + + +
Sbjct: 180 EQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEI--DYWPL 237
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
PA SL L+ L L+ + AF+ L L L L+ N + +I
Sbjct: 238 LDMMPA----NSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMF 293
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
S L RL+EL I +E F+GL +L+ L ++
Sbjct: 294 SDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVS 329
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 63/265 (23%), Positives = 118/265 (44%)
Query: 10 RSKCMNPYEPSRFSTR---DPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI 66
R K +NP E + D S N+ AN++ ++ +++ L L NR+K V +
Sbjct: 68 RLKSVNPEEFISYPLLEEIDLSDNII-ANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFT 126
Query: 67 YLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFG 123
LS L +D+S +I+ F+ L L++ N + + ++S ++ +
Sbjct: 127 GLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEK 186
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL-NVFTTLADGA 182
N ++ + L +L L+L + ++P +F L L L + + + +
Sbjct: 187 CN-LTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDMMPANS 245
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 242
GL L++L + L+ + AF+ L L L L+ N + +I S L RL+EL I
Sbjct: 246 LYGLN-LTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHI 304
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEIT 267
+E F+GL +L+ L ++
Sbjct: 305 VGAQLRTIEPHSFQGLRFLRVLNVS 329
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 219 (82.2 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 105/414 (25%), Positives = 173/414 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F L+ L L L N L +P +F L L L + N + A
Sbjct: 75 NNLTELQPGLFRHLSFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALW 134
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L +L L ++ + D +F GL LR L L DN L +P LS L L+ + +
Sbjct: 135 ELPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNALTEVPVGALSSLPALQAMTLAL 194
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK-GAFADXXXXXXXXXXXXXXXXXIEEG 303
N S + F+ LS L L + R++ GA +
Sbjct: 195 NRISHVPDYAFQNLSSLVVLHLHN----NRIQHLGAHSFEGLHSLETLDLNHNELQEFPV 250
Query: 304 ALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRN 361
A+ L L L N + E + L P L+TI +NPI+ G + L R +
Sbjct: 251 AIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAF---RHLPRLH 307
Query: 362 TSAVFCNSPAPLK-YKSLI-SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
T ++ N + ++ + L + S E L AGL + + L L+ L L+ N++Q
Sbjct: 308 TLSL--NGASDIQEFPDLKGTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLELSHNQIQG 365
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 479
+P+ L + +LE++ + N + A F L+ L+ L+++ + + + AFA
Sbjct: 366 LPS--LHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNA-IRSIHPEAFATLRA 422
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDI 533
+ L GL L HL LK N S + S ++P+LRT+++
Sbjct: 423 LVKLDLTHNQLTML----PLAGLGGLVHLKLKGNLGLSQAFSKDSFPKLRTLEV 472
Score = 216 (81.1 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 97/396 (24%), Positives = 154/396 (38%)
Query: 74 DLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
D S +P G P ++L +N+ + + + + G N +S I
Sbjct: 50 DCSERGLSAVP-GDLHPLTAYLDLSMNNLTELQPGLFRHLSFLEELRLSG-NHLSHIPGQ 107
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F GL +L+IL L +NQL +P + L L LR+ N+ + + DG+F GL L L
Sbjct: 108 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPDGSFEGLPALRHLW 167
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
L LT + A L L+++ L NR+ +P L+ L L + N L A
Sbjct: 168 LDDNALTEVPVGALSSLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAH 227
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFA-DXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
F+GL L+ L++ N +++ A I E A +G P L
Sbjct: 228 SFEGLHSLETLDL----NHNELQEFPVAIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQ 283
Query: 313 HLNLKENAFTSFSESMLAW-PELRTI------DIAENPIECGCNILWLREMLVRRNTSAV 365
++ +N S P L T+ DI E P G L + L R +
Sbjct: 284 TIHFYDNPIQFVGRSAFRHLPRLHTLSLNGASDIQEFPDLKGTTSLEILT-LTRAGLQRL 342
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
L ++ LS + GL ++ L + L NR+ I
Sbjct: 343 PPGMCQQLPRLQVLELSHNQI----QGLPSL-----HRCQKLEKIGLQHNRIWEIGADTF 393
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
S+LT L+ L++ N + F L L +L++T
Sbjct: 394 SQLTSLQALDLSWNAIRSIHPEAFATLRALVKLDLT 429
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 81/301 (26%), Positives = 133/301 (44%)
Query: 43 SNPSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNH 101
S P++Q + L+ NRI V D A SL + L + + FE L L LNH
Sbjct: 183 SLPALQAMTLALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNH 242
Query: 102 NKHFPQQIVCSIISPRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 159
N+ Q+ +I + R++ G N I I + F G L+ ++ DN ++ V +F
Sbjct: 243 NEL--QEFPVAIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNPIQFVGRSAF 300
Query: 160 IYLGMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVL 218
+L L L + G + D G L L L AGL + + L L+ L L
Sbjct: 301 RHLPRLHTLSLNGASDIQEFPD--LKGTTSLEILTLTRAGLQRLPPGMCQQLPRLQVLEL 358
Query: 219 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
+ N++Q +P+ L + +LE++ + N + A F L+ L+ L+++ + + +
Sbjct: 359 SHNQIQGLPS--LHRCQKLEKIGLQHNRIWEIGADTFSQLTSLQALDLSWNA-IRSIHPE 415
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTID 338
AFA L GL L HL LK N S + S ++P+LRT++
Sbjct: 416 AFATLRALVKLDLTHNQLTML----PLAGLGGLVHLKLKGNLGLSQAFSKDSFPKLRTLE 471
Query: 339 I 339
+
Sbjct: 472 V 472
Score = 159 (61.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 66/237 (27%), Positives = 109/237 (45%)
Query: 46 SIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
S++ L+L N++ + + A+ SLQ + L ++P G FE L L L+ N
Sbjct: 114 SLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPDGSFEGLPALRHLWLDDNAL 173
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
P + S+ + + + + NRIS + F+ L++L +L+L +N+++ + SF L
Sbjct: 174 TEVPVGALSSLPALQAMTL-ALNRISHVPDYAFQNLSSLVVLHLHNNRIQHLGAHSFEGL 232
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N A LGRL L + I + AF G L+++ DN
Sbjct: 233 HSLETLDLNHNELQEFPV-AIRTLGRLQELGFHNNNIQTIPEKAFLGNPLLQTIHFYDNP 291
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSML-EAGCFKGLSYLKRLEITGASNLTRVRKG 278
+Q + L RL L + NG S + E KG + L+ L +T A L R+ G
Sbjct: 292 IQFVGRSAFRHLPRLHTLSL--NGASDIQEFPDLKGTTSLEILTLTRAG-LQRLPPG 345
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 215 (80.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 89/367 (24%), Positives = 155/367 (42%)
Query: 30 NLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGF 88
N Q +L+ P +Q L ++ + + + + I LS L+ + L +P F
Sbjct: 82 NTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLF 141
Query: 89 EPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
+ L LQL N + P ++ S+ R + + QN ++++ + F+ LT L++L L
Sbjct: 142 CHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNL-AQNLLTQLPKGAFQSLTGLQMLKL 200
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
+N L +P + L L EL + N T L+ F+ L L L L+ + ++ +
Sbjct: 201 SNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSL 260
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F L L L L DN L+++P + L L + N + G F LS L L +
Sbjct: 261 FSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTL 320
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE 326
+ + +T + + F + + L L LNL N T+
Sbjct: 321 SHNA-ITDLPEHVFRNLEQLVKLSLDSNNLTA-LHPALFHNLSRLQLLNLSRNQLTTLPG 378
Query: 327 SMLAWP-ELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISL 381
+ +L + + NP +C C++ WLR + + + FC PA LK + + +L
Sbjct: 379 GIFDTNYDLFNLALLGNPWQCDCHLSYLTSWLRLYNNQISNTHTFCAGPAYLKGQLVPNL 438
Query: 382 SAEDLGC 388
E L C
Sbjct: 439 KQEQLIC 445
Score = 203 (76.5 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 87/356 (24%), Positives = 149/356 (41%)
Query: 127 ISRIDQACFEGLTAL-RILYLDDNQLRSVPT--PSFIYLGMLAELRVGLNVFTTLADGAF 183
++R+ Q C G R ++ D QL +P P I + E FTT+ AF
Sbjct: 15 LARLTQPCPVGCDCFGREVFCSDEQLADIPPDIPPHITDIVFVE-----TAFTTVRTRAF 69
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+G L+ + + ++ +AF GL L+ L +T + + ++ S L+ LE+L +
Sbjct: 70 SGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLD 129
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
+ + L F + L+ L++ G N R G + +G
Sbjct: 130 FDRLAGLPEDLFCHMDILESLQLQG--NQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKG 187
Query: 304 ALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPI-ECGCNI---LWLREMLV 358
A L L L L N E L + L+ + + N I E ++ L+ EML
Sbjct: 188 AFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLW 247
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
++ + C+ P L + SL +L+ L L + + F GL L L+ N+L+
Sbjct: 248 LQHNA--ICHLPVSL-FSSLHNLTF--LSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLE 302
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
+IP + L+RL L + N + L F+ L L +L + ++NLT + F
Sbjct: 303 TIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLD-SNNLTALHPALF 357
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 64/234 (27%), Positives = 99/234 (42%)
Query: 28 SCNLQEANLDVIPSH---SNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLII 83
S LQ L +P S ++ L L+ N + + A LQ + LS+ +
Sbjct: 149 SLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARL 208
Query: 84 PIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTAL 141
P G L EL L+ N + + S + + N I + + F L L
Sbjct: 209 PEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWL-QHNAICHLPVSLFSSLHNL 267
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
L L DN LR++P F + L L + N T+ +GAF L RL +L L +T+
Sbjct: 268 TFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITD 327
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
+ ++ FR L L L L N L ++ L+RL+ L + +N + L G F
Sbjct: 328 LPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLPGGIF 381
Score = 178 (67.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 96/407 (23%), Positives = 162/407 (39%)
Query: 53 STNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVC 111
S ++ + IP +++ + V+ + TT G K+V L +H
Sbjct: 36 SDEQLADIPPDIPPHITDIVFVETAFTTVRTRAFSGSPNLTKVVFLN-TQVRHLEPDAFG 94
Query: 112 SIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG 171
+ + +EI G + +S + F L++L L LD ++L +P F ++ +L L++
Sbjct: 95 GLPRLQDLEITG-SPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESLQLQ 153
Query: 172 LNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 231
N TL F L L L+L LT + AF+ L+GL+ L L++N L +P L
Sbjct: 154 GNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGAL 213
Query: 232 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 291
L+ L+EL + N + L F L L+ L + + + + F+
Sbjct: 214 GSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNA-ICHLPVSLFSSLHNLTFLSL 272
Query: 292 XXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPI-ECGCN 349
+ EG L HL+L N + E L ++ ++ N I + +
Sbjct: 273 KDNALRT-LPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHNAITDLPEH 331
Query: 350 ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRS 409
+ E LV+ + + + P + +L L L + LT + F L +
Sbjct: 332 VFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQL--LNLSRNQLTTLPGGIFDTNYDLFN 389
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
L L N Q LS LT L + N S C G +YLK
Sbjct: 390 LALLGNPWQC--DCHLSYLTSW--LRLYNNQISNTHTFC-AGPAYLK 431
Score = 157 (60.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 90/394 (22%), Positives = 154/394 (39%)
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
T + AF G L +V + +++ + L RL++LEI + S L A F LS
Sbjct: 62 TTVRTRAFSGSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLS 121
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV-GLPNLYHLNLKE 318
L++L + L + + F G L L +L LNL +
Sbjct: 122 SLEKLTLD-FDRLAGLPEDLFCHMDILESLQLQGNQLRTL--PGRLFQSLRDLRTLNLAQ 178
Query: 319 NAFTSFSESML-AWPELRTIDIAENPIEC---GC--NILWLREMLVRRNTSAVFCNSPAP 372
N T + + L+ + ++ N + G ++ L+E+ + N A+ +P
Sbjct: 179 NLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGN--AI--TELSP 234
Query: 373 LKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 432
+ L SL E L + ++ + F L L L L DN L+++P + L
Sbjct: 235 HLFSQLFSL--EMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLL 292
Query: 433 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 492
L + N + G F LS L L ++ + +T + + F +
Sbjct: 293 HLSLSYNQLETIPEGAFTNLSRLVSLTLSHNA-ITDLPEHVFRNLEQLVKLSLDSNNLTA 351
Query: 493 IIEEDALV-GLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAENPIECGCNIL----W 546
+ AL L L LNL N T+ + +L + + NP +C C++ W
Sbjct: 352 L--HPALFHNLSRLQLLNLSRNQLTTLPGGIFDTNYDLFNLALLGNPWQCDCHLSYLTSW 409
Query: 547 LREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 580
LR + + + FC PA LK + + +L E L
Sbjct: 410 LRLYNNQISNTHTFCAGPAYLKGQLVPNLKQEQL 443
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 217 (81.4 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 85/292 (29%), Positives = 135/292 (46%)
Query: 117 RRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
R +EI +N+I +I+ F GL L L L DN+L VP+ +F YL L EL + N
Sbjct: 93 RHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNP 152
Query: 175 FTTLADGAFNGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
TL AF+ + L LDL L ISD AF GL LR L L L+ IP L+
Sbjct: 153 IETLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLRYLNLGMCGLKDIPN--LTP 210
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXX 293
L RLEELE+ N ++ G F+GL L++L + S ++ + + AF D
Sbjct: 211 LVRLEELELSGNRLEIIRPGSFQGLESLRKLWLMH-SQMSVIERNAF-DDLKNLEELNLS 268
Query: 294 XXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESM-LAWPELRTIDIAENPIECG-CNIL 351
+ L L ++L N + + + L+W T+ N C C+
Sbjct: 269 HNSLHSLPHDLFTPLQKLERVHLNHNPWVCNCDVLWLSWWLKETVP--SNTTCCARCHAP 326
Query: 352 -WLREMLVRRNTSAVF-CNSPAPLKYKSLISLS---AEDLGC-AGAGLTNIS 397
+L+ + + F C +P ++ + ++++ A +L C G +T+++
Sbjct: 327 PYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVN 378
Score = 196 (74.1 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 69/233 (29%), Positives = 105/233 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P S NLQE + VI S + ++ L LS N+I+ ++ A +L ++
Sbjct: 64 PDNISNNTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLE 123
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L ++P FE KL EL L +N + P + S RR+++ ++ I
Sbjct: 124 LFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDYISD 183
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
A F GL LR L L L+ +P + L L EL + N + G+F GL L L
Sbjct: 184 AAFVGLINLRYLNLGMCGLKDIP--NLTPLVRLEELELSGNRLEIIRPGSFQGLESLRKL 241
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
L + ++ I NAF L L L L+ N L S+P + L +LE + + N
Sbjct: 242 WLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHN 294
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + + +F +L L L++ N + GAFNGL L+ L+L LT
Sbjct: 72 RYLNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTL 131
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
+ AF LS LR L L +N ++++P ++ L L++G+ + F GL
Sbjct: 132 VPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLIN 191
Query: 261 LKRLEI 266
L+ L +
Sbjct: 192 LRYLNL 197
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 67/270 (24%), Positives = 107/270 (39%)
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNI-LWLREMLVRRNTSAVFC 367
N +LNL+EN S++ L + +++N I I + L NT +F
Sbjct: 70 NTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNQIR---QIEVGAFNGLPNLNTLELFD 126
Query: 368 NSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQL 425
N + ++ LS +L + + AF + LR L L + +L I
Sbjct: 127 NRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDYISDAAF 186
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
L L L +G G + L L+ LE++G + L +R G+F
Sbjct: 187 VGLINLRYLNLGMCGLKDIPN--LTPLVRLEELELSG-NRLEIIRPGSF-QGLESLRKLW 242
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNI 544
+IE +A L NL LNL N+ S + +L + + NP C C++
Sbjct: 243 LMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNCDV 302
Query: 545 LWL----REMLVRRNTSAVFCNSPAPLKYK 570
LWL +E + T C++P LK K
Sbjct: 303 LWLSWWLKETVPSNTTCCARCHAPPYLKGK 332
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 62/244 (25%), Positives = 97/244 (39%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
L + DN + R L L +N +Q I + L LE L++ +N +E G F GL
Sbjct: 60 LEEVPDNIS---NNTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGL 116
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE 318
L LE+ + LT V AF + + A +P+L L+L E
Sbjct: 117 PNLNTLELFD-NRLTLVPSQAF-EYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGE 174
Query: 319 -NAFTSFSES-MLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYK 376
S++ + LR +++ CG + LVR + N ++
Sbjct: 175 LKKLDYISDAAFVGLINLRYLNLGM----CGLKDIPNLTPLVRLEELELSGNRLEIIRPG 230
Query: 377 SLISL-SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 435
S L S L + ++ I NAF L L L L+ N L S+P + L +LE +
Sbjct: 231 SFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVH 290
Query: 436 IGQN 439
+ N
Sbjct: 291 LNHN 294
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 215 (80.7 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 87/339 (25%), Positives = 140/339 (41%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F G+T L+ L L D+ + ++ +F L L LR+ N + L + + L L L
Sbjct: 70 FSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFL 129
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
L ++ N F+ L LR L L N+L +P S L +L+ L++ +N + L G
Sbjct: 130 DHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGL 189
Query: 255 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHL 314
L++L + ++ L + G A+ I GA L NL L
Sbjct: 190 LGAQIKLEKL-LLYSNRLMSLDSGLLANLGALTELRLERNHLRS-IAPGAFDSLGNLSTL 247
Query: 315 NLKENAFTSFSESM---LAWPELRTIDIAENPIE----------CGCNILWLREMLVRRN 361
L N S ++ ++W L + + ENP+E G LWL +R
Sbjct: 248 TLSGNLLESLPPALFLHVSW--LTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTL 305
Query: 362 TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 421
+A F N L + L+ L L+ + F GL+ LR L + N L+ +P
Sbjct: 306 PAAAFRN----LSGLQTLGLTRNPL------LSALPPGMFHGLTELRVLAVHTNALEELP 355
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
L L RL ++ + N L F+ LS L +++
Sbjct: 356 EDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQL 394
Score = 212 (79.7 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 81/322 (25%), Positives = 139/322 (43%)
Query: 31 LQEANLDVI-PSHSNP--SIQRLVLSTNRIKTVDSAI-PIYLSLQHVDLSHTTWLIIPIG 86
L ++++ I P N ++ L L+ N+I + AI + L+ + L H +
Sbjct: 81 LSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLDQN 140
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F+ L +L LN N+ P + S+ + +++ +N ++ + Q L L
Sbjct: 141 LFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDL-SRNNLTHLPQGLLGAQIKLEKL 199
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L N+L S+ + LG L ELR+ N ++A GAF+ LG LS L L G L ++
Sbjct: 200 LLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPP 259
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
F +S L L L +N L+ +P ++ L EL + L A F+ LS L+ L
Sbjct: 260 ALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTL 319
Query: 265 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF 324
+T L+ + G F + E AL GL L ++L+ N +
Sbjct: 320 GLTRNPLLSALPPGMF-HGLTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRAL 378
Query: 325 SESMLA-WPELRTIDIAENPIE 345
++ L T+ + N ++
Sbjct: 379 PRTLFRNLSSLVTVQLEHNQLK 400
Score = 204 (76.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 90/349 (25%), Positives = 144/349 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+IS + +A + + L L+LD N LR + F L L +L + N + L F
Sbjct: 107 RNKISHLPRAILDKMVLLEQLFLDHNALRDLDQNLFQKLLNLRDLCLNQNQLSFLPANLF 166
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+ LG+L LDL LT++ L L+L NRL S+ + L+ L L EL +
Sbjct: 167 SSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLE 226
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE- 302
+N + G F L L L ++G NL A + E
Sbjct: 227 RNHLRSIAPGAFDSLGNLSTLTLSG--NLLESLPPALFLHVSWLTRLTLFENPLEELPEV 284
Query: 303 --GALVGLPNLY----HLN-LKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLRE 355
G + GL L+ HL L AF + S L+T+ + NP+ +
Sbjct: 285 LFGEMAGLRELWLNGTHLRTLPAAAFRNLSG-------LQTLGLTRNPLLSALPP-GMFH 336
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
L AV N+ L +L L + L + FR LS L ++ L
Sbjct: 337 GLTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEH 396
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR-LEITG 462
N+L+++P + L +L + +G N + + + G + L +L+ LE+ G
Sbjct: 397 NQLKTLPGDVFAALPQLTRVLLGHNPW-LCDCGLWPFLQWLRHHLELLG 444
Score = 201 (75.8 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 89/359 (24%), Positives = 144/359 (40%)
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
FP C + V+ G + + LT + + +D L+S SF + +
Sbjct: 19 FPCPKTCKCVVRDAVQCSGGSVAHIAELGLPTNLTHILLFRMDRGVLQS---HSFSGMTV 75
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + + + + G FN L +L L L ++++ + L L L N L+
Sbjct: 76 LQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALR 135
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 284
+ KL L +L + QN S L A F L LK L+++ +NLT + +G
Sbjct: 136 DLDQNLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLS-RNNLTHLPQGLLG-AQ 193
Query: 285 XXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENP 343
++ G L L L L L+ N S + + L T+ ++ N
Sbjct: 194 IKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNL 253
Query: 344 IECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFR 402
+E L+L + R T +F N L ++ +L G L + AFR
Sbjct: 254 LESLPPALFLHVSWLTRLT--LFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFR 311
Query: 403 GLSGLRSLVLTDNRLQS-IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
LSGL++L LT N L S +P LT L L + N L +GL L+++ +
Sbjct: 312 NLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSL 370
Score = 185 (70.2 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 82/344 (23%), Positives = 131/344 (38%)
Query: 121 IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 180
+ + IS ID F L L+ L L N++ +P + +L +L + N L
Sbjct: 80 MLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLLEQLFLDHNALRDLDQ 139
Query: 181 GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
F L L L L L+ + N F L L+ L L+ N L +P L +LE+L
Sbjct: 140 NLFQKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNLTHLPQGLLGAQIKLEKL 199
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
+ N L++G L L L + ++L + GAF D +
Sbjct: 200 LLYSNRLMSLDSGLLANLGALTELRLE-RNHLRSIAPGAF-DSLGNLSTLTLSGNLLESL 257
Query: 301 EEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTI-----DIAENPIECGCNILWLR 354
+ + L L L EN E + LR + + P N+ L+
Sbjct: 258 PPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQ 317
Query: 355 EMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
+ + RN ++ P + L L L L + ++A RGL LR + L
Sbjct: 318 TLGLTRNP---LLSALPPGMFHGLTELRV--LAVHTNALEELPEDALRGLGRLRQVSLRH 372
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
NRL+++P L+ L +++ N L F L L R+
Sbjct: 373 NRLRALPRTLFRNLSSLVTVQLEHNQLKTLPGDVFAALPQLTRV 416
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 77/312 (24%), Positives = 128/312 (41%)
Query: 38 VIPSHSNPS---IQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEK 93
V+ SHS +QRL+LS + I +D + L+ + L+ +P +
Sbjct: 64 VLQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVL 123
Query: 94 LVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQL 151
L +L L+HN + Q + +++ R + QN++S + F L L++L L N L
Sbjct: 124 LEQLFLDHNALRDLDQNLFQKLLNLRDL-CLNQNQLSFLPANLFSSLGKLKVLDLSRNNL 182
Query: 152 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLS 211
+P L +L + N +L G LG L+ L L L +I+ AF L
Sbjct: 183 THLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERNHLRSIAPGAFDSLG 242
Query: 212 GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L +L L+ N L+S+P ++ L L + +N L F ++ L+ L + G ++
Sbjct: 243 NLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELWLNG-TH 301
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-A 330
L + AF + + G GL L L + NA E L
Sbjct: 302 LRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEELPEDALRG 361
Query: 331 WPELRTIDIAEN 342
LR + + N
Sbjct: 362 LGRLRQVSLRHN 373
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 60/228 (26%), Positives = 101/228 (44%)
Query: 46 SIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN-- 102
++ L L N ++++ A +L + LS +P F L L L N
Sbjct: 219 ALTELRLERNHLRSIAPGAFDSLGNLSTLTLSGNLLESLPPALFLHVSWLTRLTLFENPL 278
Query: 103 KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY- 161
+ P+ + + R + + G + + + A F L+ L+ L L N L S P +
Sbjct: 279 EELPEVLFGEMAGLRELWLNGTH-LRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHG 337
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L L V N L + A GLGRL + LR L + FR LS L ++ L N
Sbjct: 338 LTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHN 397
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR-LEITG 268
+L+++P + L +L + +G N + + + G + L +L+ LE+ G
Sbjct: 398 QLKTLPGDVFAALPQLTRVLLGHNPW-LCDCGLWPFLQWLRHHLELLG 444
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 77/345 (22%), Positives = 140/345 (40%)
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
+ ++F G++ L+ L+L+D+ + +I + L +L+ L + +N S L + L
Sbjct: 65 LQSHSFSGMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISHLPRAILDKMVLL 124
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
++L + + L + + F + L L L+L N
Sbjct: 125 EQLFLDHNA-LRDLDQNLF-QKLLNLRDLCLNQNQLSFLPANLFSSLGKLKVLDLSRNNL 182
Query: 322 TSFSESML-AWPELRTIDIAEN---PIECG--CNILWLREMLVRRNTSAVFCNSPAPLKY 375
T + +L A +L + + N ++ G N+ L E+ + RN S AP +
Sbjct: 183 THLPQGLLGAQIKLEKLLLYSNRLMSLDSGLLANLGALTELRLERN----HLRSIAPGAF 238
Query: 376 KSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 435
SL +LS L +G L ++ F +S L L L +N L+ +P ++ L EL
Sbjct: 239 DSLGNLST--LTLSGNLLESLPPALFLHVSWLTRLTLFENPLEELPEVLFGEMAGLRELW 296
Query: 436 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIE 495
+ L A F+ LS L+ L +T L+ + G F +
Sbjct: 297 LNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLSALPPGMFHGLTELRVLAVHTNALEEL-P 355
Query: 496 EDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
EDAL GL L ++L+ N + ++ L T+ + N ++
Sbjct: 356 EDALRGLGRLRQVSLRHNRLRALPRTLFRNLSSLVTVQLEHNQLK 400
>RGD|1588563 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] REFSEQ:NM_001106947 Ncbi:NP_001100417
Length = 836
Score = 155 (59.6 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 39/124 (31%), Positives = 68/124 (54%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N++ I+ F GL+AL+ L+L++N+L+ + +F+ + L L+ N+ + GA
Sbjct: 91 GNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
FN L +L L L ++ + DN FR + L L + NR+Q +P L + R+ EL+
Sbjct: 151 FNKLHKLKVLILNDNLISFLPDNIFR-FASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQ 209
Query: 242 IGQN 245
+ N
Sbjct: 210 LEDN 213
Score = 113 (44.8 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 54/207 (26%), Positives = 80/207 (38%)
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
L+A+ L G + ++ + F GL L L N++ +I + LT L L + N
Sbjct: 377 LNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITAIKGEVFHNLTNLRRLYLNGNQ 436
Query: 441 FSMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDAL 499
L F GL L+ L + NL + + G F D +
Sbjct: 437 IERLYPEIFSGLHNLQYLYLE--YNLIKEILAGTF-DSLPNLQLLYLNNNLLKSLPVYIF 493
Query: 500 VGLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
G P L LNL+ N F S + L ID+ NP +C C+++ L+ L + N
Sbjct: 494 SGAP-LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDG 552
Query: 558 AVF----CNSPAPLKYKSLISLSAEDL 580
V C +P L SL E L
Sbjct: 553 IVVKELKCETPVQFANIELKSLKNEIL 579
Score = 113 (44.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 47/208 (22%), Positives = 85/208 (40%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+ + L + N F S SL L +N+LQ+I L+ L++L + N +L
Sbjct: 64 LNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 252 AGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
A F G+ L+ L+ NL + + +GAF + + + + +
Sbjct: 124 ADTFLGIENLEYLQAD--YNLIKYIERGAF-NKLHKLKVLILNDNLISFLPDN-IFRFAS 179
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIA--ENPIECGCNIL----WLREMLVRRNTSA 364
L HL+++ N + R +++ +NP C C++L WL M
Sbjct: 180 LTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGE 239
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAG 392
C +P+ L + L + ++L G G
Sbjct: 240 AICETPSDLYGRLLKETNKQELCPMGTG 267
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 42/156 (26%), Positives = 68/156 (43%)
Query: 114 ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
++ +++ + G N I +D + F L +L+L NQ+ ++ F L L L + N
Sbjct: 377 LNAKKLHVNGNN-IKDVDISDFTEFEGLDLLHLGSNQITAIKGEVFHNLTNLRRLYLNGN 435
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L F+GL L L L + I F L L+ L L +N L+S+P S
Sbjct: 436 QIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSLPNLQLLYLNNNLLKSLPVYIFSG 495
Query: 234 LTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEITG 268
L L + N F L +G L L ++++ G
Sbjct: 496 AP-LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEG 530
Score = 111 (44.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 52/202 (25%), Positives = 77/202 (38%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L + G + ++ + F GL L L N++ +I + LT L L + N L
Sbjct: 382 LHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITAIKGEVFHNLTNLRRLYLNGNQIERLY 441
Query: 252 AGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
F GL L+ L + NL + + G F D + G P
Sbjct: 442 PEIFSGLHNLQYLYLE--YNLIKEILAGTF-DSLPNLQLLYLNNNLLKSLPVYIFSGAP- 497
Query: 311 LYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF-- 366
L LNL+ N F S + L ID+ NP +C C+++ L+ L + N V
Sbjct: 498 LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVKE 557
Query: 367 --CNSPAPLKYKSLISLSAEDL 386
C +P L SL E L
Sbjct: 558 LKCETPVQFANIELKSLKNEIL 579
Score = 110 (43.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N+I+ I F LT LR LYL+ NQ+ + F L L L + N+ + G
Sbjct: 409 GSNQITAIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGT 468
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ L L L L L ++ F G + L L L +N+ +P L +L L +++
Sbjct: 469 FDSLPNLQLLYLNNNLLKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQSLTQID 527
Query: 242 IGQN 245
+ N
Sbjct: 528 LEGN 531
Score = 101 (40.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 35/125 (28%), Positives = 52/125 (41%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L +N L + +F+ L +G N + GAF GL L L L L +
Sbjct: 64 LNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F G+ L L N ++ I +KL +L+ L + N S L F+ S L
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFAS-LTH 182
Query: 264 LEITG 268
L+I G
Sbjct: 183 LDIRG 187
Score = 97 (39.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
NQL+ P +F +L LN+ L F +L L L NI AF
Sbjct: 52 NQLKP-PWSNFYHLNFQNNF---LNI---LYPNTFVNFSHAVSLHLGNNKLQNIEGGAFL 104
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
GLS L+ L L +N L+ + + LE L+ N +E G F L LK L
Sbjct: 105 GLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVL 160
Score = 63 (27.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHFPQQ 108
L+L+ N I + I + SL H+D+ +P IG E ++VELQL N P
Sbjct: 160 LILNDNLISFLPDNIFRFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDN---PWN 216
Query: 109 IVCSII 114
C ++
Sbjct: 217 CSCDLL 222
Score = 58 (25.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 29/109 (26%), Positives = 50/109 (45%)
Query: 46 SIQRLVLSTNRIKTV--DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN- 102
++++L L+ N +K + D+ + I +L+++ + I G F KL L LN N
Sbjct: 108 ALKQLHLNNNELKILRADTFLGIE-NLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNL 166
Query: 103 -KHFPQQIVCSIISPRRVEIFGQNRISRIDQ-ACFEGLTALRILYLDDN 149
P I S ++I G NRI ++ E + + L L+DN
Sbjct: 167 ISFLPDNIF-RFASLTHLDIRG-NRIQKLPYIGVLEHIGRVVELQLEDN 213
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 215 (80.7 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 85/312 (27%), Positives = 136/312 (43%)
Query: 136 EGLTA-LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
EG+ R+L L N+L+++ F+ L +L++ N+ + + GAF+ L L L L
Sbjct: 69 EGIPIDTRLLDLSKNRLKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSNLLGLRTLGL 128
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
R L I F GLS L L +++N++ + +L L+ELE+G N +
Sbjct: 129 RNNNLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQELYNLKELEVGDNDLVFISHRA 188
Query: 255 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHL 314
F GLS L++L + NLT V AF+ I + LY L
Sbjct: 189 FHGLSSLEQLTMERC-NLTSVPTEAFSHLHNLLTLKLRHLNVNV-IRD---FSFRRLYRL 243
Query: 315 NLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCN-SPAPL 373
+ E A ES+ A L ++I I CN+ + + ++ F N S P+
Sbjct: 244 KILEIANWPLLESLTA-KSLHGLNITTLSIT-NCNLTAVPYVAIQHLVYLRFFNLSFNPI 301
Query: 374 ------KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
K +L+ L A L G L +I +F+GL+ LR L ++ N L ++
Sbjct: 302 EVVEGNKMHNLLRLQAFHL--VGGRLVSIEPYSFKGLNYLRVLNVSSNSLSTLEESAFHS 359
Query: 428 LTRLEELEIGQN 439
+ LE L + N
Sbjct: 360 VGNLETLALHDN 371
Score = 187 (70.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 91/367 (24%), Positives = 152/367 (41%)
Query: 19 PSRF--STRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI-YLSLQHVDL 75
PSR S ++ S L +P + L LS NR+K ++ + Y L+ + L
Sbjct: 45 PSRCECSAQERSVVCHRRKLITLPEGIPIDTRLLDLSKNRLKAINPEEFLNYPQLEDLQL 104
Query: 76 SHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
+ +I G F L L L +N K + + + R++I +N+I +
Sbjct: 105 NENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDI-SENKIVILLDY 163
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F+ L L+ L + DN L + +F L L +L + T++ AF+ L L L
Sbjct: 164 MFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLK 223
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 252
LR + I D +FR L L+ L + + L+S+ K L L + L I + +
Sbjct: 224 LRHLNVNVIRDFSFRRLYRLKILEIANWPLLESLTAKSLHGLN-ITTLSITNCNLTAVPY 282
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
+ L YL+ ++ N V +G IE + GL L
Sbjct: 283 VAIQHLVYLRFFNLS--FNPIEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFKGLNYLR 340
Query: 313 HLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCNS 369
LN+ N+ ++ ES + L T+ + +NP+ C C +LW+ R + N C +
Sbjct: 341 VLNVSSNSLSTLEESAFHSVGNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCET 400
Query: 370 PAPLKYK 376
P L+ K
Sbjct: 401 PEFLQGK 407
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 70/286 (24%), Positives = 113/286 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL L I+ F L L L +N + I S L L L + N +++
Sbjct: 78 LDLSKNRLKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQ 137
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L RL+I+ N + I A GL +L
Sbjct: 138 LGVFTGLSNLTRLDIS--ENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSL 195
Query: 312 YHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP 370
L ++ TS +E+ L T+ + + + + R L R + N P
Sbjct: 196 EQLTMERCNLTSVPTEAFSHLHNLLTLKLRHLNVNVIRDFSFRR--LYRLKILEI-ANWP 252
Query: 371 A--PLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
L KSL L+ L LT + A + L LR L+ N ++ + ++ L
Sbjct: 253 LLESLTAKSLHGLNITTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNPIEVVEGNKMHNL 312
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL+ + +E FKGL+YL+ L ++ +++L+ + + AF
Sbjct: 313 LRLQAFHLVGGRLVSIEPYSFKGLNYLRVLNVS-SNSLSTLEESAF 357
Score = 130 (50.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 80/368 (21%), Positives = 150/368 (40%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
RS+V +L ++P + + TRL L++ +N + F L+ L++ + ++
Sbjct: 55 RSVVCHRRKLITLP-EGIPIDTRL--LDLSKNRLKAINPEEFLNYPQLEDLQLN-ENIIS 110
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WP 332
+ GAF++ I+ G GL NL L++ EN + M
Sbjct: 111 VIEPGAFSNLLGLRTLGLRNNNLKL-IQLGVFTGLSNLTRLDISENKIVILLDYMFQELY 169
Query: 333 ELRTIDIAENPI-----ECGCNILWLREMLVRR-NTSAVFCNSPAPLKYKSLISLSAEDL 386
L+ +++ +N + + L ++ + R N ++V + + L +L++L L
Sbjct: 170 NLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLH--NLLTLKLRHL 227
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 445
+ I D +FR L L+ L + + L+S+ K L L + L I + +
Sbjct: 228 N-----VNVIRDFSFRRLYRLKILEIANWPLLESLTAKSLHGLN-ITTLSITNCNLTAVP 281
Query: 446 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNL 505
+ L YL+ ++ N V +G IE + GL L
Sbjct: 282 YVAIQHLVYLRFFNLS--FNPIEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFKGLNYL 339
Query: 506 YHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCN 562
LN+ N+ ++ ES + L T+ + +NP+ C C +LW+ R + N C
Sbjct: 340 RVLNVSSNSLSTLEESAFHSVGNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCE 399
Query: 563 SPAPLKYK 570
+P L+ K
Sbjct: 400 TPEFLQGK 407
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 60/252 (23%), Positives = 100/252 (39%)
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWPE-----LRTIDIAENPIEC-----GCNILW 352
G+ G P+ + +E + ++ PE R +D+++N ++ N
Sbjct: 39 GSATGCPSRCECSAQERSVVCHRRKLITLPEGIPIDTRLLDLSKNRLKAINPEEFLNYPQ 98
Query: 353 LREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVL 412
L ++ + N +V P + +L+ L LG L I F GLS L L +
Sbjct: 99 LEDLQLNENIISVI----EPGAFSNLLGLRT--LGLRNNNLKLIQLGVFTGLSNLTRLDI 152
Query: 413 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 472
++N++ + +L L+ELE+G N + F GLS L++L + NLT V
Sbjct: 153 SENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERC-NLTSVPTE 211
Query: 473 AFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTID 532
AF+ I + LY L + E A ES+ A L ++
Sbjct: 212 AFSHLHNLLTLKLRHLNVNVIRD----FSFRRLYRLKILEIANWPLLESLTA-KSLHGLN 266
Query: 533 IAENPIECGCNI 544
I I CN+
Sbjct: 267 ITTLSIT-NCNL 277
>MGI|MGI:2679448 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0007625 "grooming
behavior" evidence=IMP] [GO:0009410 "response to xenobiotic
stimulus" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0021756
"striatum development" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0043588 "skin development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0072358
"cardiovascular system development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2679448 GO:GO:0016021
GO:GO:0043588 GO:GO:0007268 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048813 GO:GO:0007409
GO:GO:0030534 GO:GO:0009410 InterPro:IPR000372 SMART:SM00013
GO:GO:0007625 GO:GO:0021756 GO:GO:0072358 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 eggNOG:NOG147171
CTD:26050 OMA:HHRGPAL OrthoDB:EOG4X97GH EMBL:AB097574 EMBL:BC065107
EMBL:AK011457 IPI:IPI00329844 IPI:IPI00410889 RefSeq:NP_942565.1
UniGene:Mm.235097 UniGene:Mm.417152 ProteinModelPortal:Q810B7
SMR:Q810B7 STRING:Q810B7 PhosphoSite:Q810B7 PRIDE:Q810B7
Ensembl:ENSMUST00000042767 GeneID:75409 KEGG:mmu:75409
UCSC:uc011zpr.1 InParanoid:Q810B7 NextBio:342932 Bgee:Q810B7
CleanEx:MM_SLITRK5 Genevestigator:Q810B7
GermOnline:ENSMUSG00000033214 Uniprot:Q810B7
Length = 957
Score = 137 (53.3 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 65/269 (24%), Positives = 109/269 (40%)
Query: 317 KENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYK 376
K+ ++++ S +A+ + + E P C CN L + ++ + N S A L+ K
Sbjct: 351 KDLGYSNYGPS-IAYQTKSPVPL-ECPTACTCN-LQISDLGLNVNCQERKIESIAELQPK 407
Query: 377 SLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
+ + + +T + F +GL L L +NR+ I + L L L +
Sbjct: 408 PY---NPKKMYLTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYL 464
Query: 437 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIE 495
N L F GL L+ L + NL R ++ G F D +
Sbjct: 465 NGNRIERLSPELFYGLQSLQYLFLQ--YNLIREIQAGTF-DPVPNLQLLFLNNNQLQAMP 521
Query: 496 EDALVGLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNI----LWLRE 549
GL L LNL+ N+FTS S + L ID+ +NP +C C++ LW+ +
Sbjct: 522 SGVFSGL-TLLRLNLRGNSFTSLPVSGVLDQLTSLIQIDLHDNPWDCTCDVVGMKLWIEQ 580
Query: 550 MLVRRNTSAVFCNSPAPLKYKSLISLSAE 578
+ V V C +P + S+ +E
Sbjct: 581 LKVGVLVDEVICKAPKKFAETYMRSIKSE 609
Score = 137 (53.3 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 39/127 (30%), Positives = 58/127 (45%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+YL +N + V F+ L L +G N + + D AF LG L L L G + +S
Sbjct: 414 MYLTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLS 473
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
F GL L+ L L N ++ I + L+ L + N + +G F GL+ L R
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLL-R 532
Query: 264 LEITGAS 270
L + G S
Sbjct: 533 LNLRGNS 539
Score = 137 (53.3 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 52/193 (26%), Positives = 79/193 (40%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
+T + F +GL L L +NR+ I + L L L + N L F GL
Sbjct: 421 ITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGL 480
Query: 259 SYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLK 317
L+ L + NL R ++ G F D + G GL L LNL+
Sbjct: 481 QSLQYLFLQ--YNLIREIQAGTF-DPVPNLQLLFLNNNQLQAMPSGVFSGL-TLLRLNLR 536
Query: 318 ENAFTSFSESMLA--WPELRTIDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPA 371
N+FTS S + L ID+ +NP +C C++ LW+ ++ V V C +P
Sbjct: 537 GNSFTSLPVSGVLDQLTSLIQIDLHDNPWDCTCDVVGMKLWIEQLKVGVLVDEVICKAPK 596
Query: 372 PLKYKSLISLSAE 384
+ S+ +E
Sbjct: 597 KFAETYMRSIKSE 609
Score = 132 (51.5 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 48/163 (29%), Positives = 72/163 (44%)
Query: 109 IVCSIISPRRVEIF----GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
I S ISP R I+ N +SR+ F T IL+L N ++ + T +F L
Sbjct: 71 ISLSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRG 130
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N L D F GL L L + ++ I NAF L L+ L+L DN L
Sbjct: 131 LRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLS 190
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEI 266
+P L + L L++ N +L G + + + L++
Sbjct: 191 GLPNN-LFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQL 232
Score = 124 (48.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/124 (32%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRIS I F L LR LYL+ N++ + F L L L + N+ + G
Sbjct: 441 GNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQAGT 500
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L + F GL+ LR L L N S+P L +LT L +++
Sbjct: 501 FDPVPNLQLLFLNNNQLQAMPSGVFSGLTLLR-LNLRGNSFTSLPVSGVLDQLTSLIQID 559
Query: 242 IGQN 245
+ N
Sbjct: 560 LHDN 563
Score = 120 (47.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 42/153 (27%), Positives = 77/153 (50%)
Query: 115 SPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
+P+++ + +N I+ + + F T L +L+L +N++ + +F LG L L + N
Sbjct: 410 NPKKMYLT-ENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNR 468
Query: 175 FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
L+ F GL L L L+ + I F + L+ L L +N+LQ++P+ S L
Sbjct: 469 IERLSPELFYGLQSLQYLFLQYNLIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGL 528
Query: 235 TRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEI 266
T L L + N F+ L +G L+ L ++++
Sbjct: 529 TLLR-LNLRGNSFTSLPVSGVLDQLTSLIQIDL 560
Score = 81 (33.6 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHF 105
+Q L+L+ N + + + + ++ L H+DL ++P +G + +K+VELQL N
Sbjct: 179 LQVLILNDNLLSGLPNNLFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN--- 235
Query: 106 PQQIVCSIIS 115
P C +IS
Sbjct: 236 PWNCSCELIS 245
Score = 63 (27.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 30/119 (25%), Positives = 48/119 (40%)
Query: 47 IQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH- 104
I L+LS N + + + Y + L I G F L L LN+NK
Sbjct: 83 IYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 105 -FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ + +++ N IS I+ F L L++L L+DN L +P F ++
Sbjct: 143 LLRDDTFLGLENLEYLQV-DYNYISVIEPNAFGKLHMLQVLILNDNLLSGLPNNLFRFV 200
>RGD|1310957 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10116 "Rattus norvegicus" [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISO]
[GO:0021756 "striatum development" evidence=ISO] [GO:0030534 "adult
behavior" evidence=ISO] [GO:0043588 "skin development"
evidence=ISO] [GO:0048813 "dendrite morphogenesis" evidence=ISO]
[GO:0072358 "cardiovascular system development" evidence=ISO]
REFSEQ:NM_001107284 Ncbi:NP_001100754
Length = 958
Score = 139 (54.0 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 65/269 (24%), Positives = 108/269 (40%)
Query: 317 KENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYK 376
K+ ++++ S +A+ + + E P C CN L + ++ + N S A L+ K
Sbjct: 351 KDLGYSNYGPS-IAYQTKSPVPL-ECPTACTCN-LQISDLGLNVNCQERKIESIAELQPK 407
Query: 377 SLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
+ + + +T + F +GL L L +NR+ I + L L L +
Sbjct: 408 PY---NPKKMYLTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYL 464
Query: 437 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIE 495
N L F GL L+ L + NL R ++ G F D +
Sbjct: 465 NGNRIERLSPELFYGLQSLQYLFLQ--YNLIREIQSGTF-DPVPNLQLLFLNNNQLQAMP 521
Query: 496 EDALVGLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNI----LWLRE 549
GL L LNL+ N+FTS S + L ID+ +NP +C C + LW+ +
Sbjct: 522 SGVFSGL-TLLRLNLRSNSFTSLPVSGVLDQLTSLIQIDLHDNPWDCTCEVVGMKLWIEQ 580
Query: 550 MLVRRNTSAVFCNSPAPLKYKSLISLSAE 578
+ V V C +P + S+ +E
Sbjct: 581 LKVGVLVDEVICKAPKKFAETYMRSIKSE 609
Score = 139 (54.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 52/193 (26%), Positives = 78/193 (40%)
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
+T + F +GL L L +NR+ I + L L L + N L F GL
Sbjct: 421 ITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGL 480
Query: 259 SYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLK 317
L+ L + NL R ++ G F D + G GL L LNL+
Sbjct: 481 QSLQYLFLQ--YNLIREIQSGTF-DPVPNLQLLFLNNNQLQAMPSGVFSGL-TLLRLNLR 536
Query: 318 ENAFTSFSESMLA--WPELRTIDIAENPIECGCNI----LWLREMLVRRNTSAVFCNSPA 371
N+FTS S + L ID+ +NP +C C + LW+ ++ V V C +P
Sbjct: 537 SNSFTSLPVSGVLDQLTSLIQIDLHDNPWDCTCEVVGMKLWIEQLKVGVLVDEVICKAPK 596
Query: 372 PLKYKSLISLSAE 384
+ S+ +E
Sbjct: 597 KFAETYMRSIKSE 609
Score = 132 (51.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 38/127 (29%), Positives = 58/127 (45%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+YL +N + V F+ L L +G N + + D AF LG L L L G + +S
Sbjct: 414 MYLTENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLS 473
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
F GL L+ L L N ++ I + + L+ L + N + +G F GL+ L R
Sbjct: 474 PELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLL-R 532
Query: 264 LEITGAS 270
L + S
Sbjct: 533 LNLRSNS 539
Score = 129 (50.5 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 47/163 (28%), Positives = 72/163 (44%)
Query: 109 IVCSIISPRRVEIF----GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
I S ISP R I+ N ++R+ F T IL+L N ++ + T +F L
Sbjct: 71 ISLSEISPPRFPIYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRG 130
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N L D F GL L L + ++ I NAF L L+ L+L DN L
Sbjct: 131 LRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHMLQVLILNDNLLS 190
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEI 266
+P L + L L++ N +L G + + + L++
Sbjct: 191 GLPNN-LFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQL 232
Score = 127 (49.8 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 40/124 (32%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRIS I F L LR LYL+ N++ + F L L L + N+ + G
Sbjct: 441 GNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGT 500
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L + F GL+ LR L L N S+P L +LT L +++
Sbjct: 501 FDPVPNLQLLFLNNNQLQAMPSGVFSGLTLLR-LNLRSNSFTSLPVSGVLDQLTSLIQID 559
Query: 242 IGQN 245
+ N
Sbjct: 560 LHDN 563
Score = 124 (48.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 42/153 (27%), Positives = 77/153 (50%)
Query: 115 SPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
+P+++ + +N I+ + + F T L +L+L +N++ + +F LG L L + N
Sbjct: 410 NPKKMYLT-ENYITVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNR 468
Query: 175 FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
L+ F GL L L L+ + I F + L+ L L +N+LQ++P+ S L
Sbjct: 469 IERLSPELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNQLQAMPSGVFSGL 528
Query: 235 TRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEI 266
T L L + N F+ L +G L+ L ++++
Sbjct: 529 TLLR-LNLRSNSFTSLPVSGVLDQLTSLIQIDL 560
Score = 81 (33.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHF 105
+Q L+L+ N + + + + ++ L H+DL ++P +G + +K+VELQL N
Sbjct: 179 LQVLILNDNLLSGLPNNLFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEEN--- 235
Query: 106 PQQIVCSIIS 115
P C +IS
Sbjct: 236 PWNCSCELIS 245
Score = 63 (27.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 30/119 (25%), Positives = 48/119 (40%)
Query: 47 IQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH- 104
I L+LS N + + + Y + L I G F L L LN+NK
Sbjct: 83 IYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLE 142
Query: 105 -FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ + +++ N IS I+ F L L++L L+DN L +P F ++
Sbjct: 143 LLRDDTFLGLENLEYLQV-DYNYISVIEPNAFGKLHMLQVLILNDNLLSGLPNNLFRFV 200
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 216 (81.1 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 98/412 (23%), Positives = 171/412 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F L L L L N L +P +F L L L + N + A
Sbjct: 74 NNLTELQPGLFHHLRFLEELRLSGNHLSHIPGHAFSGLYSLKILMLQNNQLGGVPADALW 133
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L +L L ++ + + +F GLS LR L L DN L IP + L+ L L+ + +
Sbjct: 134 ELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLAL 193
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N S + F+ L+ L L + + + + +F A
Sbjct: 194 NRISHIPDYAFQNLTSLVVLHLHN-NRIQHLGTHSFEGLHNLETLDLNYNELQEF--PVA 250
Query: 305 LVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTS 363
+ L L L N + E + + P L+TI +NPI+C + + L + +T
Sbjct: 251 IRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAF--QDLPKLHTL 308
Query: 364 AVFCNSPAPLK-YKSLI-SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 421
++ N ++ + L + S E L AG+ + + L LR L L+ N+++ +P
Sbjct: 309 SL--NGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSHNQIEELP 366
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 481
+ L + +LEE+ + N + A F LS L+ L+++ + + + AF
Sbjct: 367 S--LHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALDLSWNA-IRSIHPEAFVTLRSLV 423
Query: 482 XXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDI 533
+ L GL L HL L+ N S + S ++P+LR +++
Sbjct: 424 KLDLTDNQLSTL----PLAGLGGLMHLKLRGNLALSQAFSKDSFPKLRILEV 471
Score = 205 (77.2 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 104/403 (25%), Positives = 161/403 (39%)
Query: 62 SAIPIYLS--LQHVDLSHTTWLIIPIGGFEPQEKLVELQL--NHNKHFPQQIVCSIISPR 117
SA+P L ++DLS + G F L EL+L NH H P + S
Sbjct: 56 SAVPRDLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGHAFSGLYS-L 114
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
++ + N++ + L +L+ L LD N + VP SF L L L + N T
Sbjct: 115 KILMLQNNQLGGVPADALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTE 174
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ A N L L A+ L +++I D AF+ L+ L L L +NR+Q + T L L
Sbjct: 175 IPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNL 234
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 297
E L++ N + L L+ L +N+ + + AF
Sbjct: 235 ETLDLNYNELQEFPVA-IRTLGRLQELGFHN-NNIKAIPEKAFMGNPLLQTIHFYDNPIQ 292
Query: 298 XXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE--NPIECGCNIL--WL 353
+ A LP L+ L+L N T E +P+L+ E G +L +
Sbjct: 293 C-VGRSAFQDLPKLHTLSL--NGATDIQE----FPDLKGTTSLEILTLTRAGIRLLPPGM 345
Query: 354 REMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLT 413
+ L R + N L E++G + I + F LS LR+L L+
Sbjct: 346 CQQLPRLRVLELSHNQIEELPSLHRCQ-KLEEIGLQHNRIGAIGADTFSQLSSLRALDLS 404
Query: 414 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
N ++SI + L L +L++ N S L GL +LK
Sbjct: 405 WNAIRSIHPEAFVTLRSLVKLDLTDNQLSTLPLAGLGGLMHLK 447
Score = 195 (73.7 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 94/384 (24%), Positives = 148/384 (38%)
Query: 89 EPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDD 148
+P ++L +N+ + + + + G N +S I F GL +L+IL L +
Sbjct: 63 DPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSG-NHLSHIPGHAFSGLYSLKILMLQN 121
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
NQL VP + L L LR+ N+ + + + +F GL L L L LT I A
Sbjct: 122 NQLGGVPADALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALN 181
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
L L+++ L NR+ IP LT L L + N L F+GL L+ L++
Sbjct: 182 NLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDL-- 239
Query: 269 ASNLTRVRKGAFA-DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES 327
N +++ A I E A +G P L ++ +N S
Sbjct: 240 --NYNELQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRS 297
Query: 328 MLA-WPELRTI------DIAENPIECGCN---ILWLREMLVRRNTSAVFCNSPAPLKYKS 377
P+L T+ DI E P G IL L +R + C L+
Sbjct: 298 AFQDLPKLHTLSLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGM-CQQLPRLRVLE 356
Query: 378 LISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 437
L E+L + L + L NR+ +I S+L+ L L++
Sbjct: 357 LSHNQIEELP------------SLHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALDLS 404
Query: 438 QNGFSMLEAGCFKGLSYLKRLEIT 461
N + F L L +L++T
Sbjct: 405 WNAIRSIHPEAFVTLRSLVKLDLT 428
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 77/299 (25%), Positives = 130/299 (43%)
Query: 45 PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P++Q + L+ NRI + D A SL + L + + FE L L LN+N+
Sbjct: 184 PALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNE 243
Query: 104 HFPQQIVCSIISPRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
Q+ +I + R++ G N I I + F G L+ ++ DN ++ V +F
Sbjct: 244 L--QEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQCVGRSAFQD 301
Query: 162 LGMLAELRVGLNVFTTLADGA-FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
L L L LN T + + G L L L AG+ + + L LR L L+
Sbjct: 302 LPKLHTL--SLNGATDIQEFPDLKGTTSLEILTLTRAGIRLLPPGMCQQLPRLRVLELSH 359
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N+++ +P+ L + +LEE+ + N + A F LS L+ L+++ + + + AF
Sbjct: 360 NQIEELPS--LHRCQKLEEIGLQHNRIGAIGADTFSQLSSLRALDLSWNA-IRSIHPEAF 416
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDI 339
L GL L HL L+ N S + S ++P+LR +++
Sbjct: 417 VTLRSLVKLDLTDNQLSTL----PLAGLGGLMHLKLRGNLALSQAFSKDSFPKLRILEV 471
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 77/324 (23%), Positives = 127/324 (39%)
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L ++P + L LT L++ N + L+ G F L +L+ L ++G ++L+ + AF+
Sbjct: 55 LSAVP-RDLDPLTAY--LDLSMNNLTELQPGLFHHLRFLEELRLSG-NHLSHIPGHAFSG 110
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAE 341
+ AL LP+L L L N + E S LR + + +
Sbjct: 111 LYSLKILMLQNNQLGG-VPADALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDD 169
Query: 342 N-----PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
N P+ N+ L+ M + N + + P +++L SL L + ++
Sbjct: 170 NALTEIPVRALNNLPALQAMTLALNRIS---HIP-DYAFQNLTSLVV--LHLHNNRIQHL 223
Query: 397 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
++F GL L +L L N LQ P + L RL+EL N + F G L+
Sbjct: 224 GTHSFEGLHNLETLDLNYNELQEFPVA-IRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQ 282
Query: 457 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFT 516
+ + + V + AF D I E L G +L L L
Sbjct: 283 TIHFYD-NPIQCVGRSAFQDLPKLHTLSLNGATD--IQEFPDLKGTTSLEILTLTRAGIR 339
Query: 517 SFSESMLAW-PELRTIDIAENPIE 539
M P LR ++++ N IE
Sbjct: 340 LLPPGMCQQLPRLRVLELSHNQIE 363
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 207 (77.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 78/308 (25%), Positives = 121/308 (39%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIIS-PRRVEIFGQN-RI 127
LQHV IP KL+ LQ N+ FP S + P V + Q+ I
Sbjct: 32 LQHVICDKVGLQKIP--KVSETTKLLNLQRNN---FPVLAANSFRTVPNLVSLHLQHCNI 86
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
+ F GL L LYL N +R + +F L L L + N + L G + L
Sbjct: 87 REVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLV 146
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L L L + + AF+G LR L L++N L S+ L + L + + +N
Sbjct: 147 NLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQL 206
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
S + L ++ L+++ + L + AF + A G
Sbjct: 207 SSYPSAALSKLRVVEELKLSH-NPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFAG 265
Query: 308 LPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA-VF 366
+ L H++L+ N S + L T+ + NP +C C + LR L + +
Sbjct: 266 VTTLKHVHLENNRLNQLP-STFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKTSRPDAT 324
Query: 367 CNSPAPLK 374
C+SPA K
Sbjct: 325 CSSPAKFK 332
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 61/224 (27%), Positives = 101/224 (45%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLII 83
S +LQ N+ + + + +++L+ LS N I+ + + A L ++ L H +
Sbjct: 78 SLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSEL 137
Query: 84 PIGGFEPQEKLVELQLNHNKHFPQQI-VCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
P G P L LQLN+NK + R +N ++ + + + L
Sbjct: 138 PRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDVENLA 197
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTN 201
+LD NQL S P+ + L ++ EL++ N ++ D AF GR L L L L
Sbjct: 198 KFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEK 257
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
SD AF G++ L+ + L +NRL +P+ LE L + N
Sbjct: 258 FSDAAFAGVTTLKHVHLENNRLNQLPST--FPFDNLETLTLTNN 299
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 57/228 (25%), Positives = 104/228 (45%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV-LSTNRIKTVDSAIPIYLSLQ---HVDLSHTTWLIIPI 85
NLQ N V+ ++S ++ LV L + A + L+ ++ LSH ++
Sbjct: 56 NLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRA 115
Query: 86 GGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G F+ +L L L+HNK P+ ++ +++ +++ N+I + F+G LR
Sbjct: 116 GAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQL-NNNKIRELRAGAFQGAKDLRW 174
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL +N L S+ S + LA+ + N ++ A + L + L L L +I
Sbjct: 175 LYLSENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIP 234
Query: 204 DNAFRGLSG-LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
DNAF+ L +L L + L+ + +T L+ + + N + L
Sbjct: 235 DNAFQSFGRYLETLWLDNTNLEKFSDAAFAGVTTLKHVHLENNRLNQL 282
Score = 138 (53.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 51/218 (23%), Positives = 93/218 (42%)
Query: 51 VLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQI 109
VL+ N +TV + + ++L QH ++ + G F ++L+ L L+HN +
Sbjct: 64 VLAANSFRTVPNLVSLHL--QHCNIRE-----VAAGAFRGLKQLIYLYLSHNDIRVLRAG 116
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
++ N++S + + L L IL L++N++R + +F L L
Sbjct: 117 AFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLY 176
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+ N T+L G+ + + L+ L L++ A L + L L+ N L+SIP
Sbjct: 177 LSENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDN 236
Query: 230 QLSKLTR-LEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
R LE L + F G++ LK + +
Sbjct: 237 AFQSFGRYLETLWLDNTNLEKFSDAAFAGVTTLKHVHL 274
Score = 135 (52.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 40/170 (23%), Positives = 69/170 (40%)
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
AF+G LR L L++N L S+ L + L + + +N S + L ++ L+
Sbjct: 165 AFQGAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRNQLSSYPSAALSKLRVVEELK 224
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
++ + L + AF + A G+ L H++L+ N
Sbjct: 225 LSH-NPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFAGVTTLKHVHLENNRLNQLP 283
Query: 520 ESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA-VFCNSPAPLK 568
S + L T+ + NP +C C + LR L + + C+SPA K
Sbjct: 284 -STFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKTSRPDATCSSPAKFK 332
>UNIPROTKB|E1BT96 [details] [associations]
symbol:E1BT96 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0030282 "bone mineralization" evidence=IEA] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=IEA] [GO:0070171 "negative regulation
of tooth mineralization" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005578 InterPro:IPR003591 SMART:SM00369
GO:GO:0005509 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104006 GO:GO:0070171 GO:GO:0030512
EMBL:AADN02013901 IPI:IPI00602330 Ensembl:ENSGALT00000007519
OMA:NRNIREV Uniprot:E1BT96
Length = 571
Score = 168 (64.2 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 63/219 (28%), Positives = 103/219 (47%)
Query: 67 YLSLQHV-DLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQN 125
Y+ + H DL T+ IP P ++++LQ N + + + + S + + N
Sbjct: 40 YVRVVHCSDLGLTS---IP-RNIPPDTRMIDLQNNKIREVKENDLQGLASLYALAL-NNN 94
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 185
+I++I F+ LR LYL NQL +PT LAELR+ N + AF G
Sbjct: 95 KITKIHPKAFQPTKNLRRLYLSHNQLTEIPTN---LPKTLAELRIHANKVKKIPKDAFKG 151
Query: 186 LGRLSALDLRGAGLTN--ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+ L L++ L N I AF G++ + + + + +L SIP K L + L EL +
Sbjct: 152 MKSLHVLEMSANPLNNDGIEPGAFEGVN-IYHIRIAEAKLTSIP-KDLP--SSLLELHLD 207
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
N + +E F L+RL + G + + V G+FA+
Sbjct: 208 DNKITAVELEDFNRYKDLQRLGL-GNNKIKDVENGSFAN 245
Score = 126 (49.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 68/262 (25%), Positives = 106/262 (40%)
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
+R+++ D L S+P M+ +L+ N + + GL L AL L +T
Sbjct: 41 VRVVHCSDLGLTSIPRNIPPDTRMI-DLQN--NKIREVKENDLQGLASLYALALNNNKIT 97
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 260
I AF+ LR L L+ N+L IPT L K L EL I N + FKG+
Sbjct: 98 KIHPKAFQPTKNLRRLYLSHNQLTEIPTN-LPKT--LAELRIHANKVKKIPKDAFKGMKS 154
Query: 261 LKRLEITGAS-NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP-----NLYHL 314
L LE++ N + GAF I E L +P +L L
Sbjct: 155 LHVLEMSANPLNNDGIEPGAFEGVNIYHIR----------IAEAKLTSIPKDLPSSLLEL 204
Query: 315 NLKENAFTSFS-ESMLAWPELRTIDIAENPI---ECG--CNILWLREMLVRRNTSAVFCN 368
+L +N T+ E + +L+ + + N I E G NI +RE+ + +N
Sbjct: 205 HLDDNKITAVELEDFNRYKDLQRLGLGNNKIKDVENGSFANIPSIREIHLEKNKLKKVPP 264
Query: 369 SPAPLKYKSLISLSAEDLGCAG 390
L+Y ++ L + + G
Sbjct: 265 GLPDLRYLQVVFLHSNHIAKLG 286
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 54/198 (27%), Positives = 95/198 (47%)
Query: 39 IPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTT--WLIIPIGGFEPQEKLV 95
IP+H +Q+L L N I+ V + ++ L+ ++LS+ + ++ G F LV
Sbjct: 341 IPAH----VQQLYLQNNDIEAVPAGPFTNVTILREINLSYNKIKFHMLDHGVFAKLSNLV 396
Query: 96 ELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL-----YLDD 148
+L L+HN+ FP + S+ R+ + G N+IS++ +GL + +L +LDD
Sbjct: 397 QLHLHHNELDEFPFPLPSSL---ERL-LLGFNKISKLPGIALDGLANITMLDLCSNFLDD 452
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
+ L+ P F + L +L + N T+ + L LS + + + NI N F
Sbjct: 453 SVLKGNP---FSAMNNLMQLNLCNNKLQTMPPNLPSSLMYLSLENNSISYIPNIPRNTFI 509
Query: 209 GLSGLRSLVLTDNRLQSI 226
L L L L N+L+ +
Sbjct: 510 SLPNLIELNLGHNKLKQV 527
Score = 121 (47.7 bits), Expect = 0.00052, P = 0.00052
Identities = 67/291 (23%), Positives = 117/291 (40%)
Query: 41 SHSN-PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLI-IPIGGFEP----QEKL 94
S +N PSI+ + L N++K V +P LQ V L H+ + + + F P +++
Sbjct: 242 SFANIPSIREIHLEKNKLKKVPPGLPDLRYLQVVFL-HSNHIAKLGVNDFCPTGRRKKEY 300
Query: 95 VELQLNHNKHFPQQI-VCSIISPRRVEIFGQNRISRIDQACFEGLTA-LRILYLDDNQLR 152
V L N + + ++I + ++ +R + + A ++ LYL +N +
Sbjct: 301 VLLHSNSPRAHSYPLGYNNLIREFPLSMYCDHRKLKT----IPNIPAHVQQLYLQNNDIE 356
Query: 153 SVPTPSFIYLGMLAELRVGLNV--FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGL 210
+VP F + +L E+ + N F L G F L L L L + + F
Sbjct: 357 AVPAGPFTNVTILREINLSYNKIKFHMLDHGVFAKLSNLVQLHLHH---NELDEFPFPLP 413
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF--SMLEAGCFKGLSYLKRLEITG 268
S L L+L N++ +P L L + L++ N S+L+ F ++ L +L +
Sbjct: 414 SSLERLLLGFNKISKLPGIALDGLANITMLDLCSNFLDDSVLKGNPFSAMNNLMQLNL-- 471
Query: 269 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
+N + I + LPNL LNL N
Sbjct: 472 CNNKLQTMPPNLPSSLMYLSLENNSISYIPNIPRNTFISLPNLIELNLGHN 522
Score = 114 (45.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 47/234 (20%), Positives = 102/234 (43%)
Query: 33 EANLDVIPSHSNPSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ 91
+ L IP + P + + L N+I+ V ++ + SL + L++ I F+P
Sbjct: 48 DLGLTSIPRNIPPDTRMIDLQNNKIREVKENDLQGLASLYALALNNNKITKIHPKAFQPT 107
Query: 92 EKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
+ L L L+HN+ P + ++ R+ N++ +I + F+G+ +L +L + N
Sbjct: 108 KNLRRLYLSHNQLTEIPTNLP-KTLAELRIHA---NKVKKIPKDAFKGMKSLHVLEMSAN 163
Query: 150 QLRSVPTPSFIYLGM-LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
L + + G+ + +R+ T++ + L L D + +T + F
Sbjct: 164 PLNNDGIEPGAFEGVNIYHIRIAEAKLTSIPKDLPSSLLELHLDDNK---ITAVELEDFN 220
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
L+ L L +N+++ + + + + E+ + +N + G L YL+
Sbjct: 221 RYKDLQRLGLGNNKIKDVENGSFANIPSIREIHLEKNKLKKVPPG-LPDLRYLQ 273
Score = 92 (37.4 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 40/171 (23%), Positives = 75/171 (43%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIA---ENPI-ECGCNILWLRE 355
+E G+ +P++ ++L++N + P+LR + + N I + G N
Sbjct: 238 VENGSFANIPSIREIHLEKNKLKKVPPGL---PDLRYLQVVFLHSNHIAKLGVNDFCPTG 294
Query: 356 MLVRRNTSAVFCNSPA----PLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLV 411
++ + NSP PL Y +LI + C L I + + ++ L
Sbjct: 295 RR-KKEYVLLHSNSPRAHSYPLGYNNLIREFPLSMYCDHRKLKTIPNIP----AHVQQLY 349
Query: 412 LTDNRLQSIPTKQLSKLTRLEELEIGQNG--FSMLEAGCFKGLSYLKRLEI 460
L +N ++++P + +T L E+ + N F ML+ G F LS L +L +
Sbjct: 350 LQNNDIEAVPAGPFTNVTILREINLSYNKIKFHMLDHGVFAKLSNLVQLHL 400
Score = 66 (28.3 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 25/111 (22%), Positives = 42/111 (37%)
Query: 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF--SMLEAGCFKGLSYLKRLEITG 462
S L L+L N++ +P L L + L++ N S+L+ F ++ L +L +
Sbjct: 414 SSLERLLLGFNKISKLPGIALDGLANITMLDLCSNFLDDSVLKGNPFSAMNNLMQLNL-- 471
Query: 463 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN 513
+N + I + + LPNL LNL N
Sbjct: 472 CNNKLQTMPPNLPSSLMYLSLENNSISYIPNIPRNTFISLPNLIELNLGHN 522
Score = 52 (23.4 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 17/76 (22%), Positives = 34/76 (44%)
Query: 374 KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 433
+YK L + LG + ++ + +F + +R + L N+L+ +P L L L+
Sbjct: 221 RYKDL-----QRLGLGNNKIKDVENGSFANIPSIREIHLEKNKLKKVPPG-LPDLRYLQV 274
Query: 434 LEIGQNGFSMLEAGCF 449
+ + N + L F
Sbjct: 275 VFLHSNHIAKLGVNDF 290
Score = 51 (23.0 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 396 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 431
+ N F ++ L L L +N+LQ++P S L L
Sbjct: 455 LKGNPFSAMNNLMQLNLCNNKLQTMPPNLPSSLMYL 490
Score = 45 (20.9 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 22/79 (27%), Positives = 32/79 (40%)
Query: 342 NPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAF 401
NP N++ L L + N P+ L Y SL + S + + NI N F
Sbjct: 458 NPFSAMNNLMQLN--LCNNKLQTMPPNLPSSLMYLSLENNSI-------SYIPNIPRNTF 508
Query: 402 RGLSGLRSLVLTDNRLQSI 420
L L L L N+L+ +
Sbjct: 509 ISLPNLIELNLGHNKLKQV 527
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 207 (77.9 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 79/311 (25%), Positives = 125/311 (40%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQN-RIS 128
LQHV + IP +L+ LQ N+ + P + + + Q+ +I
Sbjct: 37 LQHVICDNVGLKKIP--RISEATRLLNLQRNNLGNLPTGGFSEMKG--LISLHLQHCQIR 92
Query: 129 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 188
+ F+GL L LYL DN++ ++ +F L L L + N T+L G F+ +
Sbjct: 93 ELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTYLYLDGNQITSLPKGIFSPMIN 152
Query: 189 LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248
L L L L + F+G LR L ++ N L SI L ++ L L + QN S
Sbjct: 153 LFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLS 212
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
L ++ L ++ + L+ + AF A G+
Sbjct: 213 TYPLLAMSKLRVVEELNLS-KNPLSLIPDHAFRSFGRYMEKLHLNDMSLEKFSNAAFEGV 271
Query: 309 PNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREML-VRRNTSAVFC 367
L L+L+ N S S L + ++ I + NP C C + LR+ + RN C
Sbjct: 272 TALKSLHLENNKLRSLPNS-LEFSTIQNITLFNNPWSCTCPLTNLRKWMDTTRNRPDAVC 330
Query: 368 NSPAPLKYKSL 378
SPA K K +
Sbjct: 331 ASPANQKGKQI 341
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 68/245 (27%), Positives = 109/245 (44%)
Query: 42 HSNPSIQRLVLSTNRIKTVD--SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQL 99
H + +Q ++ +K + S L+LQ +L + +P GGF + L+ L L
Sbjct: 32 HCHGDLQHVICDNVGLKKIPRISEATRLLNLQRNNLGN-----LPTGGFSEMKGLISLHL 86
Query: 100 NHN--KHFPQQIVCSIISPRRVEIF-GQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 156
H + Q + + + ++ N IS I FE LT L LYLD NQ+ S+P
Sbjct: 87 QHCQIRELSGQAFKGL--NKLIYLYLSDNEISTIKPGAFEDLTELTYLYLDGNQITSLPK 144
Query: 157 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSL 216
F + L L++ N L G F G L L + G L++I + + L L
Sbjct: 145 GIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVENLAIL 204
Query: 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS-YLKRLEITGASNLTRV 275
L N L + P +SKL +EEL + +N S++ F+ Y+++L + S L +
Sbjct: 205 TLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSFGRYMEKLHLNDMS-LEKF 263
Query: 276 RKGAF 280
AF
Sbjct: 264 SNAAF 268
Score = 181 (68.8 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 62/227 (27%), Positives = 100/227 (44%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLII 83
S +LQ + + + + +L+ LS N I T+ A L ++ L +
Sbjct: 83 SLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTELTYLYLDGNQITSL 142
Query: 84 PIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
P G F P L LQLN+NK Q R N +S I + + L
Sbjct: 143 PKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVENLA 202
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTN 201
IL LD N L + P + L ++ EL + N + + D AF GR + L L L
Sbjct: 203 ILTLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSFGRYMEKLHLNDMSLEK 262
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248
S+ AF G++ L+SL L +N+L+S+P + + ++ + + N +S
Sbjct: 263 FSNAAFEGVTALKSLHLENNKLRSLPNSL--EFSTIQNITLFNNPWS 307
Score = 127 (49.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 45/181 (24%), Positives = 70/181 (38%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
L + F+G LR L ++ N L SI L ++ L L + QN S L
Sbjct: 163 LRELQPGTFKGAKDLRWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMSKL 222
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
++ L ++ + L+ + AF A G+ L L+L+
Sbjct: 223 RVVEELNLS-KNPLSLIPDHAFRSFGRYMEKLHLNDMSLEKFSNAAFEGVTALKSLHLEN 281
Query: 513 NAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREML-VRRNTSAVFCNSPAPLKYKS 571
N S S L + ++ I + NP C C + LR+ + RN C SPA K K
Sbjct: 282 NKLRSLPNS-LEFSTIQNITLFNNPWSCTCPLTNLRKWMDTTRNRPDAVCASPANQKGKQ 340
Query: 572 L 572
+
Sbjct: 341 I 341
Score = 127 (49.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 56/257 (21%), Positives = 111/257 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+L+ L N+ F + GL SL L +++ + + L +L L + N S ++
Sbjct: 60 LNLQRNNLGNLPTGGFSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIK 119
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F+ L+ L L + G + +T + KG F+ ++ G G +L
Sbjct: 120 PGAFEDLTELTYLYLDG-NQITSLPKGIFSPMINLFILQLNNNKLRE-LQPGTFKGAKDL 177
Query: 312 YHLNLKENAFTSFSESMLAWPE---LRTID---IAENPIECGCNILWLREMLVRRNTSAV 365
L + N +S L E + T+D ++ P+ + + E+ + +N ++
Sbjct: 178 RWLYMSGNELSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSL 237
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
+ ++S E L L S+ AF G++ L+SL L +N+L+S+P
Sbjct: 238 IPDHA----FRSF-GRYMEKLHLNDMSLEKFSNAAFEGVTALKSLHLENNKLRSLPNSL- 291
Query: 426 SKLTRLEELEIGQNGFS 442
+ + ++ + + N +S
Sbjct: 292 -EFSTIQNITLFNNPWS 307
>MGI|MGI:2442509 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2442509
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:139065 OrthoDB:EOG4VHK5S
EMBL:AB097573 EMBL:AK032263 EMBL:AK039763 EMBL:AK053065
IPI:IPI00396668 RefSeq:NP_848855.2 UniGene:Mm.101707
ProteinModelPortal:Q810B8 SMR:Q810B8 PhosphoSite:Q810B8
PaxDb:Q810B8 PRIDE:Q810B8 Ensembl:ENSMUST00000069926
Ensembl:ENSMUST00000114679 GeneID:245446 KEGG:mmu:245446
InParanoid:Q810B8 ChiTaRS:SLITRK4 NextBio:386707 Bgee:Q810B8
CleanEx:MM_SLITRK4 Genevestigator:Q810B8
GermOnline:ENSMUSG00000046699 Uniprot:Q810B8
Length = 837
Score = 155 (59.6 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 39/124 (31%), Positives = 68/124 (54%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N++ I+ F GL+AL+ L+L++N+L+ + +F+ + L L+ N+ + GA
Sbjct: 91 GNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
FN L +L L L ++ + DN FR + L L + NR+Q +P L + R+ EL+
Sbjct: 151 FNKLHKLKVLILNDNLISFLPDNIFR-FASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQ 209
Query: 242 IGQN 245
+ N
Sbjct: 210 LEDN 213
Score = 113 (44.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 47/208 (22%), Positives = 85/208 (40%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+ + L + N F S SL L +N+LQ+I L+ L++L + N +L
Sbjct: 64 LNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 252 AGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
A F G+ L+ L+ NL + + +GAF + + + + +
Sbjct: 124 ADTFLGIENLEYLQAD--YNLIKYIERGAF-NKLHKLKVLILNDNLISFLPDN-IFRFAS 179
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIA--ENPIECGCNIL----WLREMLVRRNTSA 364
L HL+++ N + R +++ +NP C C++L WL M
Sbjct: 180 LTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGE 239
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAG 392
C +P+ L + L + ++L G G
Sbjct: 240 AICETPSDLYGRLLKETNKQELCPMGTG 267
Score = 110 (43.8 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 54/207 (26%), Positives = 79/207 (38%)
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
L+A+ L G + ++ + F GL L L N++ I + LT L L + N
Sbjct: 377 LNAKKLHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITLIKGEVFHNLTNLRRLYLNGNQ 436
Query: 441 FSMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDAL 499
L F GL L+ L + NL + + G F D +
Sbjct: 437 IERLYPEIFSGLHNLQYLYLE--YNLIKEILAGTF-DSMPNLQLLYLNNNLLKSLPVYIF 493
Query: 500 VGLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
G P L LNL+ N F S + L ID+ NP +C C+++ L+ L + N
Sbjct: 494 SGAP-LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDG 552
Query: 558 AVF----CNSPAPLKYKSLISLSAEDL 580
V C +P L SL E L
Sbjct: 553 IVVKELKCETPVQFANIELKSLKNEIL 579
Score = 108 (43.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 41/156 (26%), Positives = 67/156 (42%)
Query: 114 ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
++ +++ + G N I +D + F L +L+L NQ+ + F L L L + N
Sbjct: 377 LNAKKLHVNGNN-IKDVDISDFTEFEGLDLLHLGSNQITLIKGEVFHNLTNLRRLYLNGN 435
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
L F+GL L L L + I F + L+ L L +N L+S+P S
Sbjct: 436 QIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSG 495
Query: 234 LTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEITG 268
L L + N F L +G L L ++++ G
Sbjct: 496 AP-LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEG 530
Score = 108 (43.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 52/202 (25%), Positives = 76/202 (37%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L + G + ++ + F GL L L N++ I + LT L L + N L
Sbjct: 382 LHVNGNNIKDVDISDFTEFEGLDLLHLGSNQITLIKGEVFHNLTNLRRLYLNGNQIERLY 441
Query: 252 AGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
F GL L+ L + NL + + G F D + G P
Sbjct: 442 PEIFSGLHNLQYLYLE--YNLIKEILAGTF-DSMPNLQLLYLNNNLLKSLPVYIFSGAP- 497
Query: 311 LYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF-- 366
L LNL+ N F S + L ID+ NP +C C+++ L+ L + N V
Sbjct: 498 LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVKE 557
Query: 367 --CNSPAPLKYKSLISLSAEDL 386
C +P L SL E L
Sbjct: 558 LKCETPVQFANIELKSLKNEIL 579
Score = 107 (42.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N+I+ I F LT LR LYL+ NQ+ + F L L L + N+ + G
Sbjct: 409 GSNQITLIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGT 468
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L ++ F G + L L L +N+ +P L +L L +++
Sbjct: 469 FDSMPNLQLLYLNNNLLKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQSLTQID 527
Query: 242 IGQN 245
+ N
Sbjct: 528 LEGN 531
Score = 101 (40.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 35/125 (28%), Positives = 52/125 (41%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L +N L + +F+ L +G N + GAF GL L L L L +
Sbjct: 64 LNFQNNFLNILYPNTFVNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F G+ L L N ++ I +KL +L+ L + N S L F+ S L
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFAS-LTH 182
Query: 264 LEITG 268
L+I G
Sbjct: 183 LDIRG 187
Score = 97 (39.2 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
NQL+ P +F +L LN+ L F +L L L NI AF
Sbjct: 52 NQLKP-PWSNFYHLNFQNNF---LNI---LYPNTFVNFSHAVSLHLGNNKLQNIEGGAFL 104
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
GLS L+ L L +N L+ + + LE L+ N +E G F L LK L
Sbjct: 105 GLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVL 160
Score = 63 (27.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHFPQQ 108
L+L+ N I + I + SL H+D+ +P IG E ++VELQL N P
Sbjct: 160 LILNDNLISFLPDNIFRFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDN---PWN 216
Query: 109 IVCSII 114
C ++
Sbjct: 217 CSCDLL 222
Score = 58 (25.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 29/109 (26%), Positives = 50/109 (45%)
Query: 46 SIQRLVLSTNRIKTV--DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN- 102
++++L L+ N +K + D+ + I +L+++ + I G F KL L LN N
Sbjct: 108 ALKQLHLNNNELKILRADTFLGIE-NLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNL 166
Query: 103 -KHFPQQIVCSIISPRRVEIFGQNRISRIDQ-ACFEGLTALRILYLDDN 149
P I S ++I G NRI ++ E + + L L+DN
Sbjct: 167 ISFLPDNIF-RFASLTHLDIRG-NRIQKLPYIGVLEHIGRVVELQLEDN 213
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 214 (80.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 101/379 (26%), Positives = 158/379 (41%)
Query: 19 PSRFSTRDPSCNL-QEANLDVIPSHSN-PSIQRLV---LSTNRIKTVDSAIPIYL--SLQ 71
P R + P L L +P S+ PS Q ++ L N I + +A + L+
Sbjct: 28 PERCDCQHPQHLLCTNRGLRAVPKTSSLPSPQDVLTYSLGGNFITNI-TAFDFHRLGQLR 86
Query: 72 HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISP-RRVEIF--GQNRIS 128
+DL + + FE +L EL L +N Q +V ++P R++ I N I
Sbjct: 87 RLDLQYNQIRSLHPKTFEKLSRLEELYLGNN--LLQALVPGTLAPLRKLRILYANGNEIG 144
Query: 129 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 188
R+ + FEGL +L L LD N L ++P F LG L L + N L AF+ LG+
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFSQLGK 204
Query: 189 LSALDLRGAGLTNISDNA--FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 246
L L+L L +A F L L +L+L+ N LQ + + L RL L + N
Sbjct: 205 LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
Query: 247 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV 306
+ L F GL L+ L + G + L ++ + +
Sbjct: 265 LTHLAPEAFWGLEALRELRLEG-NRLNQLPL-TLLEPLHSLEALDLSGNELSALHPATFG 322
Query: 307 GLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSA- 364
L L+L++NA ++ S + A P L +D+ N C C + L+ + ++
Sbjct: 323 HQGRLRELSLRDNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGNWHSQGR 382
Query: 365 ---VF--CNSPAPLKYKSL 378
VF C P L+ K L
Sbjct: 383 LLTVFVQCRHPPALRGKYL 401
Score = 204 (76.9 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 75/271 (27%), Positives = 118/271 (43%)
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
L G +TNI+ F L LR L L N+++S+ K KL+RLEEL +G N L G
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPG 125
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYH 313
L L+ L G + + R+ +G+F + + + L NL +
Sbjct: 126 TLAPLRKLRILYANG-NEIGRLSRGSF-EGLESLVKLRLDGNVLGALPDAVFAPLGNLLY 183
Query: 314 LNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP-- 370
L+L+ N ++ + +LR ++++ N ++ L +T + NS
Sbjct: 184 LHLESNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQH 243
Query: 371 -APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
P ++ L L L +G LT+++ AF GL LR L L NRL +P L L
Sbjct: 244 LGPRVFQHLPRLGL--LSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLH 301
Query: 430 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
LE L++ N S L F L+ L +
Sbjct: 302 SLEALDLSGNELSALHPATFGHQGRLRELSL 332
Score = 122 (48.0 bits), Expect = 0.00064, P = 0.00064
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
G +TNI+ F L LR L L N+++S+ K KL+RLEEL +G N L G
Sbjct: 68 GNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALVPGTL 127
Query: 450 KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLN 509
L L+ L G + + R+ +G+F + + + L NL +L+
Sbjct: 128 APLRKLRILYANG-NEIGRLSRGSF-EGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLH 185
Query: 510 LKENAFTSFSESMLAW-PELRTIDIAENPIE 539
L+ N ++ + +LR ++++ N ++
Sbjct: 186 LESNRIRFLGKNAFSQLGKLRFLNLSANELQ 216
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 215 (80.7 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 98/399 (24%), Positives = 156/399 (39%)
Query: 74 DLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQA 133
D S +P G +P ++L +N+ + + + + G N +S I
Sbjct: 51 DCSELGLSAVP-GDLDPLTAYLDLSMNNLTELQPGLFHHLRFLEELRLSG-NHLSHIPGQ 108
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
F GL +L+IL L +NQL +P + L L LR+ N+ + + + +F GL L L
Sbjct: 109 AFSGLYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLW 168
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
L LT I A L L+++ L NR+ IP LT L L + N L
Sbjct: 169 LDDNALTEIPVRALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTH 228
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFA-DXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
F+GL L+ L++ N ++++ A I E A +G P L
Sbjct: 229 SFEGLHNLETLDL----NYNKLQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQ 284
Query: 313 HLNLKENAFTSFSESMLAW-PELRTI------DIAENPIECGCN---ILWLREMLVRRNT 362
++ +N S + P+L T+ DI E P G IL L +R
Sbjct: 285 TIHFYDNPIQFVGRSAFQYLPKLHTLSLNGAMDIQEFPDLKGTTSLEILTLTRAGIRLLP 344
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
S + C L+ L E+L + L + L NR+ I
Sbjct: 345 SGM-CQQLPRLRVLELSHNQIEELP------------SLHRCQKLEEIGLQHNRIWEIGA 391
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
S+L+ L+ L++ N + F L L +L++T
Sbjct: 392 DTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLT 430
Score = 208 (78.3 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 99/411 (24%), Positives = 165/411 (40%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F L L L L N L +P +F L L L + N + A
Sbjct: 76 NNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQLGGIPAEALW 135
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L +L L ++ + + +F GLS LR L L DN L IP + L+ L L+ + +
Sbjct: 136 ELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLAL 195
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N S + F+ L+ L L + + + + +F A
Sbjct: 196 NRISHIPDYAFQNLTSLVVLHLHN-NRIQHLGTHSFEGLHNLETLDLNYNKLQEF--PVA 252
Query: 305 LVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRNT 362
+ L L L N + E + + P L+TI +NPI+ G + L +
Sbjct: 253 IRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSL 312
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
+ P K SL E L AG+ + + L LR L L+ N+++ +P+
Sbjct: 313 NGAMDIQEFP-DLKGTTSL--EILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELPS 369
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 482
L + +LEE+ + N + A F LS L+ L+++ + + + AF+
Sbjct: 370 --LHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNA-IRSIHPEAFSTLHSLVK 426
Query: 483 XXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDI 533
+ L GL L HL LK N S + S ++P+LR +++
Sbjct: 427 LDLTDNQLTTL----PLAGLGGLMHLKLKGNLALSQAFSKDSFPKLRILEV 473
Score = 191 (72.3 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 79/299 (26%), Positives = 130/299 (43%)
Query: 45 PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P++Q + L+ NRI + D A SL + L + + FE L L LN+NK
Sbjct: 186 PALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNK 245
Query: 104 HFPQQIVCSIISPRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
Q+ +I + R++ G N I I + F G L+ ++ DN ++ V +F Y
Sbjct: 246 L--QEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQY 303
Query: 162 LGMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD 220
L L L + G D G L L L AG+ + + L LR L L+
Sbjct: 304 LPKLHTLSLNGAMDIQEFPD--LKGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSH 361
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N+++ +P+ L + +LEE+ + N + A F LS L+ L+++ + + + AF
Sbjct: 362 NQIEELPS--LHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNA-IRSIHPEAF 418
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDI 339
+ L GL L HL LK N S + S ++P+LR +++
Sbjct: 419 STLHSLVKLDLTDNQLTTL----PLAGLGGLMHLKLKGNLALSQAFSKDSFPKLRILEV 473
Score = 154 (59.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 62/228 (27%), Positives = 105/228 (46%)
Query: 46 SIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
S++ L+L N++ + + A+ SLQ + L ++P FE L L L+ N
Sbjct: 115 SLKILMLQNNQLGGIPAEALWELPSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNAL 174
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
P + + ++ + + + + NRIS I F+ LT+L +L+L +N+++ + T SF L
Sbjct: 175 TEIPVRALNNLPALQAMTL-ALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGL 233
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N A LGRL L + I + AF G L+++ DN
Sbjct: 234 HNLETLDLNYNKLQEFPV-AIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNP 292
Query: 223 LQSIPTKQLSKLTRLEELEIGQNG-FSMLEAGCFKGLSYLKRLEITGA 269
+Q + L +L L + NG + E KG + L+ L +T A
Sbjct: 293 IQFVGRSAFQYLPKLHTLSL--NGAMDIQEFPDLKGTTSLEILTLTRA 338
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 217 (81.4 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 122/454 (26%), Positives = 188/454 (41%)
Query: 30 NLQEANLDVIPSHS--NPSIQR-LVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPI 85
NLQ L I H+ N R L LS NR+ + A + +L +DL H + +
Sbjct: 781 NLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSL 840
Query: 86 GGF-EPQEKLVELQLN--HNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLT- 139
F L+LN HN F ++ S + +++I N +++ D F L
Sbjct: 841 KSFLYVSNTTTPLRLNVSHNHIASFYDEL-SSYMYIYQLDI-SHNHVTKSDS--FTNLAN 896
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
LR L L NQL S+ + +F L L L V N T+L +F GL L LDL L
Sbjct: 897 TLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQL 956
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
+ F L LR L + NRL+++P +++ TRLE L+I +N S+ F +
Sbjct: 957 DQLQVEQFSNLRKLRILRINSNRLRALP-REVFMNTRLEFLDIAENQLSVWPVPAFTDIG 1015
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
+ R +NL + F + + + L NL +L+L +N
Sbjct: 1016 FTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITI-LPDNTFSFLNNLTNLDLSQN 1074
Query: 320 AF--TSFSESMLAWPELRTIDIAENPIECGCNILW-LR-EMLVRRNTSAVFCNSPAPLKY 375
T+ E + P LR + + G +L L+ +L + S + +PL
Sbjct: 1075 PLVTTNLREVFVHTPRLRKLSLHH----MGLYVLPPLKLPLLSYLDVSGNYLQELSPLG- 1129
Query: 376 KSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 435
SL L + + LTN S A +R L L N L+ I L+ L L EL
Sbjct: 1130 -SLRHL--RHVNVSHNKLTNASCAAEHLPPSVRVLDLAHNPLRRITLHDLASLRHLAELN 1186
Query: 436 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 469
I + +A F L L++L + +NL +
Sbjct: 1187 ILDVKVTNPQA--FSKLRSLRKLHASSHANLGEI 1218
Score = 190 (71.9 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 108/461 (23%), Positives = 195/461 (42%)
Query: 30 NLQEANLDVIPS--HSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIG 86
+L+ L +P S ++ L L++N+I +++ +P + +L+ + LS + +IP+
Sbjct: 531 DLERNRLTTVPVALSSLHHLKYLYLTSNQISQLNN-LPSFTENLRVLSLSGNNFSMIPVL 589
Query: 87 GFEPQEKLVELQLNHNK--HFPQQI--VCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
G + +L L + +N P+ I V S S + + N+I+ + F GL ++
Sbjct: 590 GLKNYTQLSYLNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQ 649
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL----DLRGAG 198
+ L N + ++ P ++ + L++ F + L L AL L G
Sbjct: 650 EISLSFNDI-TIHHP-LVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLG 707
Query: 199 LTN-----ISDNAFRGLSGLRSLVLTDNRLQSIPTK--QLSKLTRLEELEIGQNGFSMLE 251
L N +S+ +F + L + L+ N+L+++P Q + L E+++ NG LE
Sbjct: 708 LDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLE 767
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
A F L L+ L + ++ L + + AF + I GA LPNL
Sbjct: 768 AQTFHSLGDLQTLNLQ-SNRLRTIARHAFHNLEFLRYLDLSYNRLVN-ISHGAFTVLPNL 825
Query: 312 YHLNLKENAFTSFS-ESMLAWPELRT---IDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L+L N S S +S L T ++++ N I + L + + + S
Sbjct: 826 AALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDISHNHV 885
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
+ +L + + L A L ++ +AF L L L + N L S+ +
Sbjct: 886 TKSD--SFTNLAN-TLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQG 942
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 468
L L+EL++ N L+ F L L+ L I SN R
Sbjct: 943 LNSLQELDLSHNQLDQLQVEQFSNLRKLRILRIN--SNRLR 981
Score = 168 (64.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 117/499 (23%), Positives = 197/499 (39%)
Query: 86 GG--FEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF--GQNRISRIDQACFEGLTAL 141
GG FE +KL+ L L++N+ + V PR + N ++ Q FE L L
Sbjct: 369 GGRPFEQLQKLLWLDLSNNRIYH---VAGNYLPRSLVTMDLSSNLLTVFPQQLFEQLPEL 425
Query: 142 RILYLDDNQLRSVPTPSFIY--LGM-LAELRVGLNVFTTLADGAFN---GLGRLSALDLR 195
RI+ L DN +RSV L M L L +G N L F L AL+L
Sbjct: 426 RIVSLRDNLIRSVQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLE 485
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR-LEELEIGQNGFSMLEAGC 254
+T + + F+ +G+ LVL N + + LT LE L++ +N + +
Sbjct: 486 QNFVTQLPEAVFKA-TGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPVA- 543
Query: 255 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHL 314
L +LK L +T ++ ++++ I L L +L
Sbjct: 544 LSSLHHLKYLYLT-SNQISQLNN--LPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYL 600
Query: 315 NLKENAFTSFSESMLA---W-PELRTIDIAENPI---ECG--CNILWLREMLVRRNTSAV 365
N+ N+ T E + A W L+TI + N I G + ++E+ + N +
Sbjct: 601 NMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITI 660
Query: 366 FCNSPAPLKYKSLI-SLSAEDLGCA---GAGLTNISD-NAFRGLSGLRSLVLTDNRLQSI 420
PL ++++ +L +L A L ++ +A LS L L L +N L+ +
Sbjct: 661 H----HPLVFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQV 716
Query: 421 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN-LTRVRKGAFADXXX 479
+ +++ L + + N L G F+ ++ +EI + N L R+ F
Sbjct: 717 SNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGD 776
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPI 538
I A L L +L+L N + S + P L +D+ N +
Sbjct: 777 LQTLNLQSNRLRTIARH-AFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQL 835
Query: 539 ECGCNILWLREMLVRRNTS 557
C+ L L+ L NT+
Sbjct: 836 ---CS-LSLKSFLYVSNTT 850
Score = 165 (63.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 88/398 (22%), Positives = 155/398 (38%)
Query: 53 STNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKL--VELQLNHNKHFPQQIV 110
S + +D+ +P+ L + L + + F +L + L N K P+ +
Sbjct: 687 SLESLDPLDALLPLS-QLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLF 745
Query: 111 CSIISPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
S VEI N + R++ F L L+ L L N+LR++ +F L L L
Sbjct: 746 QSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLD 805
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRS---LVLTDNRLQSI 226
+ N ++ GAF L L+ALDL L ++S +F +S + L ++ N + S
Sbjct: 806 LSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASF 865
Query: 227 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 286
+LS + +L+I N + ++ F L+ R + L ++ AF D
Sbjct: 866 -YDELSSYMYIYQLDISHN--HVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFL 922
Query: 287 XXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIE 345
+ + GL +L L+L N E +LR + I N +
Sbjct: 923 EILNVAHNNLTS-LRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLR 981
Query: 346 CGCNILWLREML----VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAF 401
+++ L + N +V+ P P + I + + + L + + F
Sbjct: 982 ALPREVFMNTRLEFLDIAENQLSVW---PVPA-FTD-IGFTLRSIQMSHNNLEYLDASMF 1036
Query: 402 RGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L + L NR+ +P S L L L++ QN
Sbjct: 1037 INSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQN 1074
Score = 161 (61.7 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 123/555 (22%), Positives = 213/555 (38%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGF 88
C+L + + + + P RL +S N I + + Y+ + +D+SH + F
Sbjct: 836 CSLSLKSFLYVSNTTTPL--RLNVSHNHIASFYDELSSYMYIYQLDISHNH--VTKSDSF 891
Query: 89 EPQEKLVE-LQLNHNKHFP-QQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
+ L L HN+ Q + + N ++ + + F+GL +L+ L L
Sbjct: 892 TNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDL 951
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
NQL + F L L LR+ N L F RL LD+ L+ A
Sbjct: 952 SHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNT-RLEFLDIAENQLSVWPVPA 1010
Query: 207 FRGLS-GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
F + LRS+ ++ N L+ + L ++ + +N ++L F L+ L L+
Sbjct: 1011 FTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLNNLTNLD 1070
Query: 266 ITG----ASNLT-------RVRK------GAFADXXXXXXXXXXXXXXXXXIEEGALVG- 307
++ +NL R+RK G + ++E + +G
Sbjct: 1071 LSQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVLPPLKLPLLSYLDVSGNYLQELSPLGS 1130
Query: 308 LPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRNTSAV 365
L +L H+N+ N T+ S + P +R +D+A NP+ + L L N V
Sbjct: 1131 LRHLRHVNVSHNKLTNASCAAEHLPPSVRVLDLAHNPLRRITLHDLASLRHLAELNILDV 1190
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
+P + L SL + A L I GL LR L N Q + K L
Sbjct: 1191 KVTNPQA--FSKLRSLRKLHAS-SHANLGEIVAR-IPGLQQLRVHCLEPNIGQQLFAK-L 1245
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT-GASNLTRVRKGAFADXXXXXXXX 484
+ T++ LE+ + + F GLS +RL++ + ++ + G F
Sbjct: 1246 ANNTKIRLLELYGSNVQTIAPDVFTGLSRSQRLQVKISHTRISDLPPGIF---------- 1295
Query: 485 XXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDI------AENPI 538
+ E + + ++ H + A SF + W + T I + NP+
Sbjct: 1296 -------YALREVPHLSI-DISHNRINALAADSFYPNKSYWDAVGTRSIMGGLITSHNPL 1347
Query: 539 ECGCNILWLREMLVR 553
EC C ++W L R
Sbjct: 1348 ECECGLVWFGHWLRR 1362
Score = 138 (53.6 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 98/421 (23%), Positives = 160/421 (38%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE-LRVGLNVFTTLADGA 182
QN ++++ +A F+ T + L L N + V +F L E L + N TT+ A
Sbjct: 486 QNFVTQLPEAVFKA-TGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPV-A 543
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 242
+ L L L L ++ ++ N LR L L+ N IP L T+L L +
Sbjct: 544 LSSLHHLKYLYLTSNQISQLN-NLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYLNM 602
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
G N + + G F S+ L+ N +T + G+FA
Sbjct: 603 GYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITI-- 660
Query: 301 EEGALVGLPNLYH-LNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVR 359
LV N+ L + E +F F L L +D A P+ ++WL L
Sbjct: 661 -HHPLV-FENVSRTLKILELSFAVFPARSLE--SLDPLD-ALLPLS---QLIWLG--LDN 710
Query: 360 RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
N V S A ++ S I+LS L GL SD S L + L+ N L+
Sbjct: 711 NNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQ-SD----AHSHLVEIDLSYNGLER 765
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 479
+ + L L+ L + N + F L +L+ L+++ + L + GAF
Sbjct: 766 LEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLS-YNRLVNISHGAFTVLPN 824
Query: 480 XXXXXXXXXXXXXIIEEDALV--GLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENP 537
+ + L LN+ N SF + + ++ + +DI+ N
Sbjct: 825 LAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDISHNH 884
Query: 538 I 538
+
Sbjct: 885 V 885
Score = 58 (25.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 29/116 (25%), Positives = 50/116 (43%)
Query: 42 HSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ-EKLVELQLN 100
HS S++ + +S +++VD L L+ + L I F L+ L ++
Sbjct: 209 HS--SVRYIEMSNTHLQSVDDETFQGLRLKTLKLIDNELQDISERSFSTMTHSLMTLDIS 266
Query: 101 HNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSV 154
NK H P + + S R+ + +N I+ +D LR L+L DN + V
Sbjct: 267 GNKMQHLPLDALQRLHSLSRL-VAQRNHITTLDGNWDAQHDTLRSLHLSDNDITEV 321
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 206 (77.6 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 78/308 (25%), Positives = 120/308 (38%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIIS-PRRVEIFGQN-RI 127
LQHV IP KL+ LQ N+ FP S + P V + Q+ I
Sbjct: 32 LQHVICDKVGLQKIP--KVSETTKLLNLQRNN---FPVLAANSFRTMPNLVSLHLQHCNI 86
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
+ F GL L LYL N +R + +F L L L + N + L G + L
Sbjct: 87 REVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLV 146
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L L L + + AF+G LR L L++N L S+ L + L + + +N
Sbjct: 147 NLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQL 206
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
S + L ++ L+++ + L + AF + A G
Sbjct: 207 SSYPSAALSKLRVVEELKLSH-NPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFSG 265
Query: 308 LPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREML-VRRNTSAVF 366
+ L H++L N S + L T+ + NP +C C + LR L + +
Sbjct: 266 VTTLKHVHLDNNRLNQLPSSF-PFDNLETLTLTNNPWKCTCQLRGLRRWLEAKASRPDAT 324
Query: 367 CNSPAPLK 374
C+SPA K
Sbjct: 325 CSSPAKFK 332
Score = 179 (68.1 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 62/224 (27%), Positives = 101/224 (45%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLII 83
S +LQ N+ + + + +++L+ LS N I+ + + A L ++ L H +
Sbjct: 78 SLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSEL 137
Query: 84 PIGGFEPQEKLVELQLNHNKHFPQQI-VCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
P G P L LQLN+NK + R +N +S + + + L
Sbjct: 138 PRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLA 197
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTN 201
+LD NQL S P+ + L ++ EL++ N ++ D AF GR L L L L
Sbjct: 198 KFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEK 257
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
SD AF G++ L+ + L +NRL +P+ LE L + N
Sbjct: 258 FSDAAFSGVTTLKHVHLDNNRLNQLPSS--FPFDNLETLTLTNN 299
Score = 134 (52.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 40/170 (23%), Positives = 68/170 (40%)
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
AF+G LR L L++N L S+ L + L + + +N S + L ++ L+
Sbjct: 165 AFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVEELK 224
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
++ + L + AF + A G+ L H++L N
Sbjct: 225 LSH-NPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVTTLKHVHLDNNRLNQLP 283
Query: 520 ESMLAWPELRTIDIAENPIECGCNILWLREML-VRRNTSAVFCNSPAPLK 568
S + L T+ + NP +C C + LR L + + C+SPA K
Sbjct: 284 SSF-PFDNLETLTLTNNPWKCTCQLRGLRRWLEAKASRPDATCSSPAKFK 332
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 49/218 (22%), Positives = 93/218 (42%)
Query: 51 VLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQI 109
VL+ N +T+ + + ++L QH ++ + G F ++L+ L L+HN +
Sbjct: 64 VLAANSFRTMPNLVSLHL--QHCNIRE-----VAAGAFRGLKQLIYLYLSHNDIRVLRAG 116
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELR 169
++ N++S + + L L IL L++N++R + +F L L
Sbjct: 117 AFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLY 176
Query: 170 VGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 229
+ N ++L G+ + + L+ L L++ A L + L L+ N L+SIP
Sbjct: 177 LSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDN 236
Query: 230 QLSKLTR-LEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
R LE L + F G++ LK + +
Sbjct: 237 AFQSFGRYLETLWLDNTNLEKFSDAAFSGVTTLKHVHL 274
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 208 (78.3 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 72/222 (32%), Positives = 100/222 (45%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDL-SHTTWLIIPI 85
P+ + Q N +P PS QRL L N I+T+ +L + L S+ I P
Sbjct: 42 PTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRTLRPGT-FGSNLLTLWLFSNNLSTIYP- 99
Query: 86 GGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR--ISRIDQACFEGLTALRI 143
G F + L EL L N+H + R++ R +S + F GL +L+
Sbjct: 100 GTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQY 159
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL +N L + F L L+ L + N L + F GLG L L L G L +
Sbjct: 160 LYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVH 219
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
AFRGLS L L L +N L S+P + L+ L LE L + N
Sbjct: 220 RAAFRGLSRLTILYLFNNSLASLPGEALADLPSLEFLRLNAN 261
Score = 177 (67.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 64/234 (27%), Positives = 97/234 (41%)
Query: 114 ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
+ P +F QN + R + G L L+L N L ++ +F +L L EL +G N
Sbjct: 58 LPPSTQRLFLQNNLIRTLRPGTFGSNLLT-LWLFSNNLSTIYPGTFRHLQALEELDLGDN 116
Query: 174 V-FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
+L F GL RL +L L L+++ N FRGL L+ L L +N L + +
Sbjct: 117 RHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFA 176
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
L L L + N +L F+GL L RL + G + L V + AF
Sbjct: 177 DLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHG-NRLQGVHRAAFRGLSRLTILYLF 235
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC 346
E AL LP+L L L N + + W + ++ + + C
Sbjct: 236 NNSLASLPGE-ALADLPSLEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTC 288
Score = 158 (60.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 72/272 (26%), Positives = 109/272 (40%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR-GAGLTNI 202
L+L +N +R++ +F L L + N +T+ G F L L LDL L ++
Sbjct: 65 LFLQNNLIRTLRPGTFG--SNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSL 122
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ F+GL L+SL L +L S+P L L+ L + +N L+ F L+ L
Sbjct: 123 EPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLS 182
Query: 263 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFT 322
L + G + L + + F + A GL L L L N+
Sbjct: 183 HLFLHG-NRLRLLTEHVFRGLGSLDRLLLHGNRLQG-VHRAAFRGLSRLTILYLFNNSLA 240
Query: 323 SF-SESMLAWPELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYKSLI 379
S E++ P L + + NP C C LW R ++S V C +P + + L
Sbjct: 241 SLPGEALADLPSLEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDLR 300
Query: 380 SLSAEDL-GCAGAGLTNISDNAFRGLSGLRSL 410
+L D C A T A RG S L
Sbjct: 301 ALREADFQACPPAAPTRPGSRA-RGNSSSNHL 331
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 61/236 (25%), Positives = 95/236 (40%)
Query: 347 GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
G N+L L L N S ++ P ++ L +L DLG L ++ + F+GL
Sbjct: 81 GSNLLTL--WLFSNNLSTIY-----PGTFRHLQALEELDLG-DNRHLRSLEPDTFQGLER 132
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
L+SL L +L S+P L L+ L + +N L+ F L+ L L + G + L
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHG-NRL 191
Query: 467 TRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAW 525
+ + F + A GL L L L N+ S E++
Sbjct: 192 RLLTEHVFRGLGSLDRLLLHGNRLQGV-HRAAFRGLSRLTILYLFNNSLASLPGEALADL 250
Query: 526 PELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 579
P L + + NP C C LW R ++S V C +P + + L +L D
Sbjct: 251 PSLEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDLRALREAD 306
>UNIPROTKB|Q86VH5 [details] [associations]
symbol:LRRTM3 "Leucine-rich repeat transmembrane neuronal
protein 3" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 EMBL:AY182028 EMBL:AY358315 EMBL:AK290168
EMBL:BX640611 EMBL:BC111492 EMBL:BC113715 EMBL:BC113717
IPI:IPI00179801 IPI:IPI00607819 RefSeq:NP_821079.3
UniGene:Hs.652155 ProteinModelPortal:Q86VH5 SMR:Q86VH5
STRING:Q86VH5 PhosphoSite:Q86VH5 DMDM:68052341 PaxDb:Q86VH5
PRIDE:Q86VH5 DNASU:347731 Ensembl:ENST00000361320
Ensembl:ENST00000373722 GeneID:347731 KEGG:hsa:347731
UCSC:uc001jmy.3 UCSC:uc001jmz.1 CTD:347731 GeneCards:GC10P068685
HGNC:HGNC:19410 HPA:HPA024109 MIM:610869 neXtProt:NX_Q86VH5
PharmGKB:PA134962991 InParanoid:Q86VH5 OMA:PCTYSKS
OrthoDB:EOG45TCMT PhylomeDB:Q86VH5 GenomeRNAi:347731 NextBio:99254
ArrayExpress:Q86VH5 Bgee:Q86VH5 CleanEx:HS_LRRTM3
Genevestigator:Q86VH5 Uniprot:Q86VH5
Length = 581
Score = 211 (79.3 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 76/282 (26%), Positives = 116/282 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N IS ID+ F G+ L+ L L N++ +F + L L + N +L F
Sbjct: 95 NHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFR 154
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL +L +L LR L I F+ L L L NR++S+ + + RL+EL +
Sbjct: 155 GLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARNVFAGMIRLKELHLEH 214
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N FS L F L L+ L + + ++ + +
Sbjct: 215 NQFSKLNLALFPRLVSLQNLYLQW-NKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSV 273
Query: 305 LVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNIL----WLREML-V 358
+PNL LNL N T + +L +W L I +A N EC NI WL+ +
Sbjct: 274 FQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGNIWECSRNICSLVNWLKSFKGL 333
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
R NT + C SP L+ ++I + ++ G T D A
Sbjct: 334 RENT--IICASPKELQGVNVID-AVKNYSICGKSTTERFDLA 372
Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/142 (30%), Positives = 66/142 (46%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N + ++ F+GL L LYLD N + ++ +F + L EL + N + + F
Sbjct: 71 NSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFR 130
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
+ L LDL L ++ FRGL L SL L N L++IP + LE L++G
Sbjct: 131 PVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGY 190
Query: 245 NGFSMLEAGCFKGLSYLKRLEI 266
N L F G+ LK L +
Sbjct: 191 NRIRSLARNVFAGMIRLKELHL 212
Score = 158 (60.7 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 71/315 (22%), Positives = 134/315 (42%)
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 185
++ I + G L + Y N L+ + F L L L + N + + + AFNG
Sbjct: 51 KLQEIPSSISAGCLGLSLRY---NSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNG 107
Query: 186 LGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ RL L L ++ +N FR ++ LR+L L+ N+L S+ ++Q L +L L + N
Sbjct: 108 IRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSN 167
Query: 246 GFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGAL 305
+ F+ L+ L++ G + + + + FA +
Sbjct: 168 SLRTIPVRIFQDCRNLELLDL-GYNRIRSLARNVFAGMIRLKELHLEHNQFSK-LNLALF 225
Query: 306 VGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIEC--GCNILWLREMLVRRNT 362
L +L +L L+ N + ++M W L+ +D++ N IE G ++ L R N
Sbjct: 226 PRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNL 285
Query: 363 SAVFCNSPAPLKYKSLIS-LSAEDLGCAGAGLTNISDNAFRGLSGLRSLV-LTDNRLQSI 420
+ N + + L S +S D+ AG + S N ++ L+S L +N +
Sbjct: 286 DS---NKLTFIGQEILDSWISLNDISLAG-NIWECSRNICSLVNWLKSFKGLRENTIICA 341
Query: 421 PTKQLSKLTRLEELE 435
K+L + ++ ++
Sbjct: 342 SPKELQGVNVIDAVK 356
Score = 139 (54.0 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 52/183 (28%), Positives = 80/183 (43%)
Query: 88 FEPQEKLVELQLNHNKHFPQQIVCSIISPRRVE--IFGQNRISRIDQACFEGLTALRILY 145
F+ +L L L+HN H + RR++ I NRIS F +T LR L
Sbjct: 81 FKGLNQLTWLYLDHN-HISNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLD 139
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L NQL S+ + F L L L + N T+ F L LDL + +++ N
Sbjct: 140 LSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARN 199
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
F G+ L+ L L N+ + +L L+ L + N S++ S L+RL+
Sbjct: 200 VFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLD 259
Query: 266 ITG 268
++G
Sbjct: 260 LSG 262
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 67/276 (24%), Positives = 108/276 (39%)
Query: 307 GLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 365
GL L L L N ++ E+ L+ + ++ N I N + R + RN
Sbjct: 83 GLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTF-RPVTNLRNLDLS 141
Query: 366 F--CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
+ +S +++ L L + L L I F+ L L L NR++S+
Sbjct: 142 YNQLHSLGSEQFRGLRKLLS--LHLRSNSLRTIPVRIFQDCRNLELLDLGYNRIRSLARN 199
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
+ + RL+EL + N FS L F L L+ L + + ++ + +
Sbjct: 200 VFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQW-NKISVIGQTMSWTWSSLQRL 258
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGC 542
+PNL LNL N T + +L +W L I +A N EC
Sbjct: 259 DLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGNIWECSR 318
Query: 543 NIL----WLREML-VRRNTSAVFCNSPAPLKYKSLI 573
NI WL+ +R NT + C SP L+ ++I
Sbjct: 319 NICSLVNWLKSFKGLRENT--IICASPKELQGVNVI 352
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 52/216 (24%), Positives = 95/216 (43%)
Query: 34 ANLDVIPSHSNPSIQRLVLSTNRIKT-VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQE 92
+N+D + ++ L+LS+NRI +++ +L+++DLS+ + F
Sbjct: 98 SNIDENAFNGIRRLKELILSSNRISYFLNNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLR 157
Query: 93 KLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQ 150
KL+ L L N + P +I + +++ G NRI + + F G+ L+ L+L+ NQ
Sbjct: 158 KLLSLHLRSNSLRTIPVRIFQDCRNLELLDL-GYNRIRSLARNVFAGMIRLKELHLEHNQ 216
Query: 151 LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD-NAFRG 209
+ F L L L + N + + L LDL G + S + F+
Sbjct: 217 FSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWTWSSLQRLDLSGNEIEAFSGPSVFQC 276
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ L+ L L N+L I + L L ++ + N
Sbjct: 277 VPNLQRLNLDSNKLTFIGQEILDSWISLNDISLAGN 312
>WB|WBGene00002282 [details] [associations]
symbol:let-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0002064
"epithelial cell development" evidence=IMP] [GO:0035150 "regulation
of tube size" evidence=IMP] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0045177 GO:GO:0040011
GO:GO:0040018 GO:GO:0002064 GeneTree:ENSGT00700000104286
GO:GO:0035150 EMBL:Z79598 EMBL:JQ292907 RefSeq:NP_510425.2
ProteinModelPortal:Q93373 SMR:Q93373 STRING:Q93373
EnsemblMetazoa:C44H4.2 GeneID:181554 KEGG:cel:CELE_C44H4.2
CTD:181554 WormBase:C44H4.2 HOGENOM:HOG000018354 OMA:PLVCTEN
Uniprot:Q93373
Length = 773
Score = 213 (80.0 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 76/326 (23%), Positives = 145/326 (44%)
Query: 28 SCNLQEANLDVIPSH--SNPSIQRLVLSTNRIKTVDSAIPIYLS--LQHVDLSHTTWLII 83
S + +A L +P + S I+RL LS N+IK +D A ++ L+ V L+H +
Sbjct: 66 SLTMNQAELVELPPNFFSGLFIRRLDLSQNKIKKIDDAAFAGINPVLEEVVLNHNLIEKV 125
Query: 84 PIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEI-FGQNRISRIDQACFEGL-T 139
P L+ L L++N +Q + ++ + +I G N+I I + F+ +
Sbjct: 126 PAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLN-KLYDINLGSNKIFSIHTSTFQNVKN 184
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
+++ + L N + +VP+ + L L L + N L F L L+ L+L G +
Sbjct: 185 SIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQI 244
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
++ AF + LR L L+ N++ + Q +LE L++ N + A GL
Sbjct: 245 HELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLK 304
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L++L + + ++ + AF + + G + GLPNL ++ ++N
Sbjct: 305 QLRQLYLAH-NKISNISSNAFTNSSIVVLVLSSNELKT--LTAGIISGLPNLQQVSFRDN 361
Query: 320 AFTSFSESMLA-WPELRTIDIAENPI 344
+ + + L +D+A+N +
Sbjct: 362 QIKTINRNAFYDAASLVMLDLAKNQL 387
Score = 207 (77.9 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 94/430 (21%), Positives = 166/430 (38%)
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG-LRSLVLTD 220
+G++ L + L F+GL + LDL + I D AF G++ L +VL
Sbjct: 61 VGLIQSLTMNQAELVELPPNFFSGLF-IRRLDLSQNKIKKIDDAAFAGINPVLEEVVLNH 119
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGF-SMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 279
N ++ +P L+ L L L++ N + E F L+ L + + G++ + +
Sbjct: 120 NLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINL-GSNKIFSIHTST 178
Query: 280 FADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTID 338
F + + A+ GL L L+L +N + L P L ++
Sbjct: 179 FQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLN 238
Query: 339 IAENPI-----ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGL 393
+A N I + N+ LR + + N ++++ L DL G
Sbjct: 239 LAGNQIHELNRQAFLNVPSLRYLYLSGNKITKL----TAYQFQTFEQLEMLDLTNNEIGA 294
Query: 394 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 453
I N+ GL LR L L N++ +I + + + + L + N L AG GL
Sbjct: 295 --IPANSLSGLKQLRQLYLAHNKISNISSNAFTN-SSIVVLVLSSNELKTLTAGIISGLP 351
Query: 454 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN 513
L+++ + + + + AF D I L L NL ++L EN
Sbjct: 352 NLQQVSFRD-NQIKTINRNAFYDAASLVMLDLAKNQLTEIAPTTFLAQL-NLLLVDLSEN 409
Query: 514 AFTSFSESMLAWPELRTIDIAENPIECGCNILWLRE---MLVRRNTSAVFCNSPAPLKYK 570
S + T+ + ENP+ C N+ L++ + VR + + P P
Sbjct: 410 KLPKTPYSAFN-SRVGTVLLKENPLVCTENLHMLQQGTGVYVRDSPDIICGRKPTPKPEP 468
Query: 571 SLISLSAEDL 580
L+ + + L
Sbjct: 469 VLVPIVTDSL 478
Score = 192 (72.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 74/306 (24%), Positives = 133/306 (43%)
Query: 44 NPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQ-EKLVELQLNH 101
NP ++ +VL+ N I+ V +A L +L +DLS+ + + I P KL ++ L
Sbjct: 109 NPVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSIVEIQEQEIFPNLNKLYDINLGS 168
Query: 102 NKHFP--QQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 159
NK F ++ + + G N ++ + + GL L+ L+L N++ + +F
Sbjct: 169 NKIFSIHTSTFQNVKNSIQTINLGHNNMTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNF 228
Query: 160 IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
+ L +L L + N L AF + L L L G +T ++ F+ L L LT
Sbjct: 229 LNLPVLNLLNLAGNQIHELNRQAFLNVPSLRYLYLSGNKITKLTAYQFQTFEQLEMLDLT 288
Query: 220 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 279
+N + +IP LS L +L +L + N S + + F S + + + ++ L + G
Sbjct: 289 NNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAFTNSSIV--VLVLSSNELKTLTAGI 346
Query: 280 FADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES-MLAWPELRTID 338
+ I A +L L+L +N T + + LA L +D
Sbjct: 347 ISGLPNLQQVSFRDNQIKT-INRNAFYDAASLVMLDLAKNQLTEIAPTTFLAQLNLLLVD 405
Query: 339 IAENPI 344
++EN +
Sbjct: 406 LSENKL 411
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 100/405 (24%), Positives = 171/405 (42%)
Query: 62 SAIPIYLSL--QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRR 118
+A+P LS Q +D+S +P F+ L ELQL N F S + +
Sbjct: 49 TAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSGLKELK 108
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
V N++ + GL+AL+ L LD N + SVP SF L L L + N T +
Sbjct: 109 VLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEV 168
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
+ L L AL L +++I D AF LS L L L +N+++S+ L LE
Sbjct: 169 PVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNLE 228
Query: 239 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
L++ N K L LK L +++++ + GAF D
Sbjct: 229 TLDLNYNNLGEFPQA-IKALPSLKELGFH-SNSISVIPDGAF-DGNPLLRTIHLYDNPLS 285
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLV 358
+ A L +L+ L ++ + ++ L ++ + I N L + ++
Sbjct: 286 FVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQKML 345
Query: 359 RRNTSAVFCNSPAPL-KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRL 417
R T + N+ L + +L E++ + I + F+GL LR L L+ N +
Sbjct: 346 R--TLDLSYNNIRDLPSFNGCHAL--EEISLQRNQIYQIKEGTFQGLISLRILDLSRNLI 401
Query: 418 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
I ++ + L + L++ F+ L + +GL+ L +L++ G
Sbjct: 402 HEIHSRAFATLGPITNLDVS---FNELTSFPTEGLNGLNQLKLVG 443
Score = 207 (77.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 91/394 (23%), Positives = 161/394 (40%)
Query: 71 QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRI 130
+ VD S +P G + +++ +N+ P+ + +++ G N +S I
Sbjct: 39 RRVDCSGKGLTAVP-EGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAG-NDLSFI 96
Query: 131 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 190
GL L++L L +NQL++VP+ + L L LR+ N T++ + +F GL +L
Sbjct: 97 HPKALSGLKELKVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLR 156
Query: 191 ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L L LT + + L L++L L N++ SIP + L+ L L + N L
Sbjct: 157 HLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSL 216
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
CF GL L+ L++ +NL + A I +GA G P
Sbjct: 217 SQHCFDGLDNLETLDLN-YNNLGEFPQAIKA--LPSLKELGFHSNSISVIPDGAFDGNPL 273
Query: 311 LYHLNLKENAFTSFSESMLA-WPELRTIDI-AENPIECGCNILWLREMLVRRNTSAVFCN 368
L ++L +N + S +L ++ I + ++ N+ + T +
Sbjct: 274 LRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISS 333
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISD-NAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
P L + + L DL NI D +F G L + L N++ I
Sbjct: 334 IPNNLCQEQKM-LRTLDLS-----YNNIRDLPSFNGCHALEEISLQRNQIYQIKEGTFQG 387
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
L L L++ +N + + F L + L+++
Sbjct: 388 LISLRILDLSRNLIHEIHSRAFATLGPITNLDVS 421
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 76/260 (29%), Positives = 124/260 (47%)
Query: 31 LQEANLDVIPSH--SN-PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIG 86
L + +L +P H SN P++Q L L+ N+I ++ D A SL + L + +
Sbjct: 160 LDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQH 219
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEI-FGQNRISRIDQACFEGLTALRI 143
F+ + L L LN+N FPQ I P E+ F N IS I F+G LR
Sbjct: 220 CFDGLDNLETLDLNYNNLGEFPQAIKAL---PSLKELGFHSNSISVIPDGAFDGNPLLRT 276
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
++L DN L V +F L L L + G ++ + G L +L L G +++I
Sbjct: 277 IHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPN--LTGTVHLESLTLTGTKISSI 334
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+N + LR+L L+ N ++ +P+ + LEE+ + +N ++ G F+GL L+
Sbjct: 335 PNNLCQEQKMLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQGLISLR 392
Query: 263 RLEITGASNLTR-VRKGAFA 281
L+++ NL + AFA
Sbjct: 393 ILDLS--RNLIHEIHSRAFA 410
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 66/225 (29%), Positives = 102/225 (45%)
Query: 50 LVLSTNRIKTVDS-AIPIYLSLQ--HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--H 104
L L N++KTV S AI +LQ +D +H T +P FE +L L L+ N
Sbjct: 110 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT--SVPEDSFEGLVQLRHLWLDDNSLTE 167
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
P + ++ + + + + N+IS I F L++L +L+L +N++RS+ F L
Sbjct: 168 VPVHPLSNLPTLQALTL-ALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDN 226
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N A L L L ++ I D AF G LR++ L DN L
Sbjct: 227 LETLDLNYNNLGEFPQ-AIKALPSLKELGFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 285
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITG 268
+ L+ L L I G SM++ G +L+ L +TG
Sbjct: 286 FVGNSAFHNLSDLHSLVI--RGASMVQQFPNLTGTVHLESLTLTG 328
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 67/276 (24%), Positives = 101/276 (36%)
Query: 192 LDLRGAGLTNISDNAFRGLSGL-RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
+D G GLT + + GLS ++L ++ N + +P LEEL++ N S +
Sbjct: 41 VDCSGKGLTAVPE----GLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFI 96
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
GL LK L + + L V A + E + GL
Sbjct: 97 HPKALSGLKELKVLTLQN-NQLKTVPSEAIRGLSALQSLRLDANHITS-VPEDSFEGLVQ 154
Query: 311 LYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLR-EMLVRRNTSAVFCN 368
L HL L +N+ T L+ P L+ + +A N I + + LV +
Sbjct: 155 LRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIR 214
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
S + + L +L DL G A + L L+ L N + IP
Sbjct: 215 SLSQHCFDGLDNLETLDLNYNNLGEF---PQAIKALPSLKELGFHSNSISVIPDGAFDGN 271
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 464
L + + N S + F LS L L I GAS
Sbjct: 272 PLLRTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGAS 307
>MGI|MGI:2679449 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2679449 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:84631 eggNOG:NOG147171
EMBL:AB097571 EMBL:AK044761 IPI:IPI00329847 RefSeq:NP_001154903.1
RefSeq:NP_942563.2 UniGene:Mm.336081 UniGene:Mm.403134
ProteinModelPortal:Q810C0 SMR:Q810C0 STRING:Q810C0
PhosphoSite:Q810C0 PaxDb:Q810C0 PRIDE:Q810C0
Ensembl:ENSMUST00000036043 Ensembl:ENSMUST00000166241 GeneID:245450
KEGG:mmu:245450 InParanoid:Q810C0 OrthoDB:EOG4GTKC9 NextBio:386711
Bgee:Q810C0 CleanEx:MM_SLITRK2 Genevestigator:Q810C0
GermOnline:ENSMUSG00000036790 Uniprot:Q810C0
Length = 846
Score = 145 (56.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 90 PQEKLVELQLNHN---KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
PQ ++ +L LN N + +P + V + + + + G N + I F GL L+ L+L
Sbjct: 60 PQYRIYQLFLNGNLLTRLYPNEFV-NYSNAVTLHL-GNNGLQEIRPGAFSGLKTLKRLHL 117
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
++N+L + +F+ L L L+ N +T+ GAF+ L +L L L L ++ N
Sbjct: 118 NNNKLEVLREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNV 177
Query: 207 FRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQN 245
FR + L L L NRL+ +P L + + E+++ +N
Sbjct: 178 FRFVL-LTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 129 (50.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI+ I + F LT+LR LYL+ N L + F L L L + NV +
Sbjct: 408 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLT 467
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ L L L L L ++ DN F G + L L L +N +P K L +L +++
Sbjct: 468 FDALINLQLLFLNNNLLRSLPDNIFGG-TALTRLNLRNNHFSHLPVKGVLDQLPAFIQID 526
Query: 242 IGQN 245
+ +N
Sbjct: 527 LQEN 530
Score = 126 (49.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 54/210 (25%), Positives = 87/210 (41%)
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
R+ L L G LT + N F S +L L +N LQ I S L L+ L + N
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKL 122
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
+L F GL L+ L+ + ++ + GAF+ + + L+
Sbjct: 123 EVLREDTFLGLESLEYLQ-ADYNYISTIEAGAFSKLNKLKVLI---------LNDNLLLS 172
Query: 308 LPN-------LYHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML- 357
LP+ L HL+L+ N F+ + + I + ENP C C++L L+ L
Sbjct: 173 LPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLD 232
Query: 358 -VRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
+ + C +P L K + L+ +DL
Sbjct: 233 TITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
Identities = 51/199 (25%), Positives = 84/199 (42%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
LT + N F S +L L +N LQ I S L L+ L + N +L F GL
Sbjct: 74 LTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGL 133
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN-------L 505
L+ L+ + ++ + GAF+ I+ ++ L+ LP+ L
Sbjct: 134 ESLEYLQ-ADYNYISTIEAGAFSKLNKLKVL---------ILNDNLLLSLPSNVFRFVLL 183
Query: 506 YHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML--VRRNTSAVFC 561
HL+L+ N F+ + + I + ENP C C++L L+ L + + C
Sbjct: 184 THLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVC 243
Query: 562 NSPAPLKYKSLISLSAEDL 580
+P L K + L+ +DL
Sbjct: 244 ETPFRLHGKDVTQLTRQDL 262
Score = 119 (46.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 49/186 (26%), Positives = 73/186 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L G L + N S L L L +NR+ I + LT L L + N +L
Sbjct: 381 LYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLY 440
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L + N+ + K D + + G L
Sbjct: 441 PSMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTA-L 497
Query: 312 YHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--- 366
LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 498 TRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEV 557
Query: 367 -CNSPA 371
C SPA
Sbjct: 558 TCESPA 563
Score = 118 (46.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 50/190 (26%), Positives = 75/190 (39%)
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
S + L G L + N S L L L +NR+ I + LT L L + N
Sbjct: 377 SPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYL 436
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVG 501
+L F GL L+ L + N+ + K D + D + G
Sbjct: 437 EVLYPSMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLP-DNIFG 493
Query: 502 LPNLYHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 559
L LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 494 GTALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVI 553
Query: 560 F----CNSPA 565
C SPA
Sbjct: 554 INEVTCESPA 563
Score = 114 (45.2 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 44/181 (24%), Positives = 74/181 (40%)
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
++V + S V P+ S S + ++ C TNISD + S + L LT N
Sbjct: 328 IMVYQTKSPVALTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSP-KKLYLTGN 386
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
LQ++ L + + L+ L +G N ++++ G F L+ L+RL + G N V +
Sbjct: 387 YLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNG--NYLEVLYPSMF 444
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 535
D I+ L NL L L N S +++ L +++
Sbjct: 445 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRN 504
Query: 536 N 536
N
Sbjct: 505 N 505
Score = 112 (44.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L+L+ N L + F+ L +G N + GAF+GL L L L L +
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N + +I SKL +L+ L + N L + F+ + L
Sbjct: 127 EDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTH 185
Query: 264 LEITG 268
L++ G
Sbjct: 186 LDLRG 190
Score = 107 (42.7 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 139 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198
T+ + LYL N L++V + L L +G N + +GAF L L L L G
Sbjct: 376 TSPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNY 435
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
L + + F GL L+ L L N ++ I L L+ L + N L F G
Sbjct: 436 LEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT 495
Query: 259 SYLKRLEI 266
+ L RL +
Sbjct: 496 A-LTRLNL 502
Score = 104 (41.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 37/143 (25%), Positives = 60/143 (41%)
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
TNISD + S + L LT N LQ++ L + + L+ L +G N ++++ G F L+
Sbjct: 366 TNISDLQPKPTSP-KKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLT 424
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L+RL + G N V + D I+ L NL L L N
Sbjct: 425 SLRRLYLNG--NYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNN 482
Query: 320 AFTSFSESMLAWPELRTIDIAEN 342
S +++ L +++ N
Sbjct: 483 LLRSLPDNIFGGTALTRLNLRNN 505
Score = 78 (32.5 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 86 GGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G F + L L LN+NK + + S ++ N IS I+ F L L++
Sbjct: 104 GAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQA-DYNYISTIEAGAFSKLNKLKV 162
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA-DGAFNGLGRLSALDL 194
L L+DN L S+P+ F ++ +L L + N + G +G + + L
Sbjct: 163 LILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQL 213
Score = 63 (27.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG-FEPQEKLVELQLNHNKHFPQQ 108
L+L+ N + ++ S + ++ L H+DL ++P G E ++E+QL N P
Sbjct: 163 LILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN---PWN 219
Query: 109 IVCSII 114
C ++
Sbjct: 220 CTCDLL 225
Score = 50 (22.7 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN 102
+++RL L+ N+++ + + L SL+++ + I G F KL L LN N
Sbjct: 111 TLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDN 168
>RGD|1561361 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1561361 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:LQADYNY OrthoDB:EOG4GTKC9
IPI:IPI00361290 Ensembl:ENSRNOT00000015401 Uniprot:D3ZK41
Length = 846
Score = 145 (56.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 46/160 (28%), Positives = 81/160 (50%)
Query: 90 PQEKLVELQLNHN---KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
PQ ++ +L LN N + +P + V + + + + G N + I F GL L+ L+L
Sbjct: 60 PQYRIYQLFLNGNLLTRLYPNEFV-NYSNAVTLHL-GNNGLQEIRPGAFSGLKTLKRLHL 117
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
++N+L + +F+ L L L+ N +T+ GAF+ L +L L L L ++ N
Sbjct: 118 NNNKLEVLREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNV 177
Query: 207 FRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQN 245
FR + L L L NRL+ +P L + + E+++ +N
Sbjct: 178 FRFVL-LTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 129 (50.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI+ I + F LT+LR LYL+ N L + F L L L + NV +
Sbjct: 408 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLT 467
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ L L L L L ++ DN F G + L L L +N +P K L +L +++
Sbjct: 468 FDALINLQLLFLNNNLLRSLPDNIFGG-TALTRLNLRNNHFSHLPVKGVLDQLPAFIQID 526
Query: 242 IGQN 245
+ +N
Sbjct: 527 LQEN 530
Score = 126 (49.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 54/210 (25%), Positives = 87/210 (41%)
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
R+ L L G LT + N F S +L L +N LQ I S L L+ L + N
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKL 122
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
+L F GL L+ L+ + ++ + GAF+ + + L+
Sbjct: 123 EVLREDTFLGLESLEYLQ-ADYNYISTIEAGAFSKLNKLKVLI---------LNDNLLLS 172
Query: 308 LPN-------LYHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML- 357
LP+ L HL+L+ N F+ + + I + ENP C C++L L+ L
Sbjct: 173 LPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLD 232
Query: 358 -VRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
+ + C +P L K + L+ +DL
Sbjct: 233 TITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
Identities = 51/199 (25%), Positives = 84/199 (42%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
LT + N F S +L L +N LQ I S L L+ L + N +L F GL
Sbjct: 74 LTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGL 133
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN-------L 505
L+ L+ + ++ + GAF+ I+ ++ L+ LP+ L
Sbjct: 134 ESLEYLQ-ADYNYISTIEAGAFSKLNKLKVL---------ILNDNLLLSLPSNVFRFVLL 183
Query: 506 YHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML--VRRNTSAVFC 561
HL+L+ N F+ + + I + ENP C C++L L+ L + + C
Sbjct: 184 THLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVC 243
Query: 562 NSPAPLKYKSLISLSAEDL 580
+P L K + L+ +DL
Sbjct: 244 ETPFRLHGKDVTQLTRQDL 262
Score = 118 (46.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 45/181 (24%), Positives = 74/181 (40%)
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
++V + S V P+ S S + ++ C TNISD + S + L LT N
Sbjct: 328 IMVYQTKSPVALTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSP-KKLYLTGN 386
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
LQ++ L + T L+ L +G N ++++ G F L+ L+RL + G N V +
Sbjct: 387 YLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNG--NYLEVLYPSMF 444
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 535
D I+ L NL L L N S +++ L +++
Sbjct: 445 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRN 504
Query: 536 N 536
N
Sbjct: 505 N 505
Score = 116 (45.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 48/186 (25%), Positives = 73/186 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L G L + N + L L L +NR+ I + LT L L + N +L
Sbjct: 381 LYLTGNYLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLY 440
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L + N+ + K D + + G L
Sbjct: 441 PSMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTA-L 497
Query: 312 YHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--- 366
LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 498 TRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEV 557
Query: 367 -CNSPA 371
C SPA
Sbjct: 558 TCESPA 563
Score = 115 (45.5 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 49/190 (25%), Positives = 75/190 (39%)
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
S + L G L + N + L L L +NR+ I + LT L L + N
Sbjct: 377 SPKKLYLTGNYLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYL 436
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVG 501
+L F GL L+ L + N+ + K D + D + G
Sbjct: 437 EVLYPSMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLP-DNIFG 493
Query: 502 LPNLYHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 559
L LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 494 GTALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVI 553
Query: 560 F----CNSPA 565
C SPA
Sbjct: 554 INEVTCESPA 563
Score = 112 (44.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L+L+ N L + F+ L +G N + GAF+GL L L L L +
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N + +I SKL +L+ L + N L + F+ + L
Sbjct: 127 EDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTH 185
Query: 264 LEITG 268
L++ G
Sbjct: 186 LDLRG 190
Score = 108 (43.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 38/143 (26%), Positives = 60/143 (41%)
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
TNISD + S + L LT N LQ++ L + T L+ L +G N ++++ G F L+
Sbjct: 366 TNISDLQPKPTSP-KKLYLTGNYLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLT 424
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L+RL + G N V + D I+ L NL L L N
Sbjct: 425 SLRRLYLNG--NYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNN 482
Query: 320 AFTSFSESMLAWPELRTIDIAEN 342
S +++ L +++ N
Sbjct: 483 LLRSLPDNIFGGTALTRLNLRNN 505
Score = 105 (42.0 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 139 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198
T+ + LYL N L++V + L L +G N + +GAF L L L L G
Sbjct: 376 TSPKKLYLTGNYLQTVYKNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNY 435
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
L + + F GL L+ L L N ++ I L L+ L + N L F G
Sbjct: 436 LEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT 495
Query: 259 SYLKRLEI 266
+ L RL +
Sbjct: 496 A-LTRLNL 502
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 86 GGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G F + L L LN+NK + + S ++ N IS I+ F L L++
Sbjct: 104 GAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQA-DYNYISTIEAGAFSKLNKLKV 162
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA-DGAFNGLGRLSALDL 194
L L+DN L S+P+ F ++ +L L + N + G +G + + L
Sbjct: 163 LILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQL 213
Score = 63 (27.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG-FEPQEKLVELQLNHNKHFPQQ 108
L+L+ N + ++ S + ++ L H+DL ++P G E ++E+QL N P
Sbjct: 163 LILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN---PWN 219
Query: 109 IVCSII 114
C ++
Sbjct: 220 CTCDLL 225
Score = 50 (22.7 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN 102
+++RL L+ N+++ + + L SL+++ + I G F KL L LN N
Sbjct: 111 TLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDN 168
>UNIPROTKB|F1N5L8 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:DAAA02067886 IPI:IPI00731735 RefSeq:XP_002699658.1
RefSeq:XP_609417.2 Ensembl:ENSBTAT00000015639 GeneID:530936
KEGG:bta:530936 NextBio:20875355 Uniprot:F1N5L8
Length = 837
Score = 155 (59.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 39/124 (31%), Positives = 68/124 (54%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N++ I+ F GL+AL+ L+L++N+L+ + +F+ + L L+ N+ + GA
Sbjct: 91 GNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
FN L +L L L ++ + DN FR + L L + NR+Q +P L + R+ EL+
Sbjct: 151 FNKLHKLKVLILNDNLISFLPDNIFR-FASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQ 209
Query: 242 IGQN 245
+ N
Sbjct: 210 LEDN 213
Score = 115 (45.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 47/208 (22%), Positives = 85/208 (40%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+ + L + N F S SL L +N+LQ+I L+ L++L + N +L
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 252 AGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
A F G+ L+ L+ NL + + +GAF + + + + +
Sbjct: 124 ADTFLGIENLEYLQAD--YNLIKYIERGAF-NKLHKLKVLILNDNLISFLPDN-IFRFAS 179
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIA--ENPIECGCNIL----WLREMLVRRNTSA 364
L HL+++ N + R +++ +NP C C++L WL M
Sbjct: 180 LTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGE 239
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAG 392
C +P+ L + L + ++L G G
Sbjct: 240 AICETPSDLYGRLLKETNKQELCPMGTG 267
Score = 109 (43.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 52/202 (25%), Positives = 76/202 (37%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L + G + ++ + F GL L L N++ +I LT L L + N L
Sbjct: 382 LHVNGNSIKDVDISDFTEFEGLDLLHLGSNQITAIKGDVFRNLTNLRRLYLNGNQIERLY 441
Query: 252 AGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
F GL L+ L + NL + + G F D + G P
Sbjct: 442 PEMFSGLHNLQYLYLE--YNLIKEILAGTF-DSMPNLQLLYLNNNLLKSLPVYIFSGAP- 497
Query: 311 LYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF-- 366
L LNL+ N F S + L ID+ NP +C C+++ L+ L + N V
Sbjct: 498 LARLNLRNNKFMYLPVSGVLDQLQALTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVMKE 557
Query: 367 --CNSPAPLKYKSLISLSAEDL 386
C +P L SL E L
Sbjct: 558 LKCETPVQFANIELKSLKNEIL 579
Score = 108 (43.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N+I+ I F LT LR LYL+ NQ+ + F L L L + N+ + G
Sbjct: 409 GSNQITAIKGDVFRNLTNLRRLYLNGNQIERLYPEMFSGLHNLQYLYLEYNLIKEILAGT 468
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L ++ F G + L L L +N+ +P L +L L +++
Sbjct: 469 FDSMPNLQLLYLNNNLLKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQALTQID 527
Query: 242 IGQN 245
+ N
Sbjct: 528 LEGN 531
Score = 108 (43.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 41/153 (26%), Positives = 66/153 (43%)
Query: 117 RRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 176
+++ + G N I +D + F L +L+L NQ+ ++ F L L L + N
Sbjct: 380 KKLHVNG-NSIKDVDISDFTEFEGLDLLHLGSNQITAIKGDVFRNLTNLRRLYLNGNQIE 438
Query: 177 TLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 236
L F+GL L L L + I F + L+ L L +N L+S+P S
Sbjct: 439 RLYPEMFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP- 497
Query: 237 LEELEIGQNGFSMLE-AGCFKGLSYLKRLEITG 268
L L + N F L +G L L ++++ G
Sbjct: 498 LARLNLRNNKFMYLPVSGVLDQLQALTQIDLEG 530
Score = 107 (42.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 53/206 (25%), Positives = 78/206 (37%)
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
+A+ L G + ++ + F GL L L N++ +I LT L L + N
Sbjct: 378 NAKKLHVNGNSIKDVDISDFTEFEGLDLLHLGSNQITAIKGDVFRNLTNLRRLYLNGNQI 437
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDALV 500
L F GL L+ L + NL + + G F D +
Sbjct: 438 ERLYPEMFSGLHNLQYLYLE--YNLIKEILAGTF-DSMPNLQLLYLNNNLLKSLPVYIFS 494
Query: 501 GLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNTSA 558
G P L LNL+ N F S + L ID+ NP +C C+++ L+ L + N
Sbjct: 495 GAP-LARLNLRNNKFMYLPVSGVLDQLQALTQIDLEGNPWDCTCDLVALKLWLEKLNDGI 553
Query: 559 VF----CNSPAPLKYKSLISLSAEDL 580
V C +P L SL E L
Sbjct: 554 VMKELKCETPVQFANIELKSLKNEIL 579
Score = 101 (40.6 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 35/125 (28%), Positives = 53/125 (42%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L +N L + +F+ L++G N + GAF GL L L L L +
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F G+ L L N ++ I +KL +L+ L + N S L F+ S L
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFAS-LTH 182
Query: 264 LEITG 268
L+I G
Sbjct: 183 LDIRG 187
Score = 98 (39.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
NQL+ P +F +L LN+ L F +L L L NI AF
Sbjct: 52 NQLKP-PWSNFYHLNFQNNF---LNI---LYPNTFLNFSHAVSLQLGNNKLQNIEGGAFL 104
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
GLS L+ L L +N L+ + + LE L+ N +E G F L LK L
Sbjct: 105 GLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVL 160
Score = 80 (33.2 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 32/167 (19%), Positives = 66/167 (39%)
Query: 370 PAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
PAP K+ S + C + ++S+ + S + L + N ++ + ++
Sbjct: 343 PAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKP-SNAKKLHVNGNSIKDVDISDFTEFE 401
Query: 430 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXX 489
L+ L +G N + ++ F+ L+ L+RL + G + + R+ F+
Sbjct: 402 GLDLLHLGSNQITAIKGDVFRNLTNLRRLYLNG-NQIERLYPEMFSGLHNLQYLYLEYNL 460
Query: 490 XXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAEN 536
I+ +PNL L L N S + + L +++ N
Sbjct: 461 IKEILA-GTFDSMPNLQLLYLNNNLLKSLPVYIFSGAPLARLNLRNN 506
Score = 63 (27.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHFPQQ 108
L+L+ N I + I + SL H+D+ +P IG E ++VELQL N P
Sbjct: 160 LILNDNLISFLPDNIFRFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDN---PWN 216
Query: 109 IVCSII 114
C ++
Sbjct: 217 CSCDLL 222
>UNIPROTKB|F1RQ64 [details] [associations]
symbol:LOC100525800 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:TVFVAFC EMBL:CU928352 RefSeq:XP_003135482.1
Ensembl:ENSSSCT00000023710 Ensembl:ENSSSCT00000034435
GeneID:100525800 KEGG:ssc:100525800 Uniprot:F1RQ64
Length = 838
Score = 155 (59.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 39/124 (31%), Positives = 68/124 (54%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N++ I+ F GL+AL+ L+L++N+L+ + +F+ + L L+ N+ + GA
Sbjct: 91 GNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
FN L +L L L ++ + DN FR + L L + NR+Q +P L + R+ EL+
Sbjct: 151 FNKLHKLKVLILNDNLISFLPDNIFR-FASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQ 209
Query: 242 IGQN 245
+ N
Sbjct: 210 LEDN 213
Score = 115 (45.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 47/208 (22%), Positives = 85/208 (40%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+ + L + N F S SL L +N+LQ+I L+ L++L + N +L
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 252 AGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
A F G+ L+ L+ NL + + +GAF + + + + +
Sbjct: 124 ADTFLGIENLEYLQAD--YNLIKYIERGAF-NKLHKLKVLILNDNLISFLPDN-IFRFAS 179
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIA--ENPIECGCNIL----WLREMLVRRNTSA 364
L HL+++ N + R +++ +NP C C++L WL M
Sbjct: 180 LTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGE 239
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAG 392
C +P+ L + L + ++L G G
Sbjct: 240 AICETPSDLYGRLLKETNKQELCPMGTG 267
Score = 109 (43.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 41/162 (25%), Positives = 70/162 (43%)
Query: 108 QIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 167
+++ + +++ + G N I +D + F L +L+L NQ+ ++ F L L
Sbjct: 371 ELIPKPFNAKKLHVNG-NSIKDVDISDFAEFEGLDLLHLGSNQIAAIKGDVFHNLTNLRR 429
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N L F+GL L L L + I F + L+ L L +N L+S+P
Sbjct: 430 LYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLP 489
Query: 228 TKQLSKLTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEITG 268
S L L + N F L +G L L ++++ G
Sbjct: 490 VYIFSGAP-LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEG 530
Score = 109 (43.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 52/202 (25%), Positives = 76/202 (37%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L + G + ++ + F GL L L N++ +I LT L L + N L
Sbjct: 382 LHVNGNSIKDVDISDFAEFEGLDLLHLGSNQIAAIKGDVFHNLTNLRRLYLNGNQIERLY 441
Query: 252 AGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
F GL L+ L + NL + + G F D + G P
Sbjct: 442 PEIFSGLHNLQYLYLE--YNLIKEILAGTF-DSMPNLQLLYLNNNLLKSLPVYIFSGAP- 497
Query: 311 LYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF-- 366
L LNL+ N F S + L ID+ NP +C C+++ L+ L + N V
Sbjct: 498 LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVKE 557
Query: 367 --CNSPAPLKYKSLISLSAEDL 386
C +P L SL E L
Sbjct: 558 LRCETPVQFANIELKSLKNEIL 579
Score = 107 (42.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 53/206 (25%), Positives = 78/206 (37%)
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
+A+ L G + ++ + F GL L L N++ +I LT L L + N
Sbjct: 378 NAKKLHVNGNSIKDVDISDFAEFEGLDLLHLGSNQIAAIKGDVFHNLTNLRRLYLNGNQI 437
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDALV 500
L F GL L+ L + NL + + G F D +
Sbjct: 438 ERLYPEIFSGLHNLQYLYLE--YNLIKEILAGTF-DSMPNLQLLYLNNNLLKSLPVYIFS 494
Query: 501 GLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNILWLREMLVRRNTSA 558
G P L LNL+ N F S + L ID+ NP +C C+++ L+ L + N
Sbjct: 495 GAP-LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGI 553
Query: 559 VF----CNSPAPLKYKSLISLSAEDL 580
V C +P L SL E L
Sbjct: 554 VVKELRCETPVQFANIELKSLKNEIL 579
Score = 107 (42.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N+I+ I F LT LR LYL+ NQ+ + F L L L + N+ + G
Sbjct: 409 GSNQIAAIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEILAGT 468
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L ++ F G + L L L +N+ +P L +L L +++
Sbjct: 469 FDSMPNLQLLYLNNNLLKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQSLTQID 527
Query: 242 IGQN 245
+ N
Sbjct: 528 LEGN 531
Score = 101 (40.6 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 35/125 (28%), Positives = 53/125 (42%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L +N L + +F+ L++G N + GAF GL L L L L +
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F G+ L L N ++ I +KL +L+ L + N S L F+ S L
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFAS-LTH 182
Query: 264 LEITG 268
L+I G
Sbjct: 183 LDIRG 187
Score = 98 (39.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
NQL+ P +F +L LN+ L F +L L L NI AF
Sbjct: 52 NQLKP-PWSNFYHLNFQNNF---LNI---LYPNTFLNFSHAVSLQLGNNKLQNIEGGAFL 104
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
GLS L+ L L +N L+ + + LE L+ N +E G F L LK L
Sbjct: 105 GLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVL 160
Score = 63 (27.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHFPQQ 108
L+L+ N I + I + SL H+D+ +P IG E ++VELQL N P
Sbjct: 160 LILNDNLISFLPDNIFRFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDN---PWN 216
Query: 109 IVCSII 114
C ++
Sbjct: 217 CSCDLL 222
>UNIPROTKB|F1NKM7 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 GO:GO:0016500 GeneTree:ENSGT00650000092962
OMA:AYGKAPS EMBL:AADN02063998 EMBL:AADN02063999 IPI:IPI00591161
ProteinModelPortal:F1NKM7 Ensembl:ENSGALT00000000792 Uniprot:F1NKM7
Length = 811
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 96/394 (24%), Positives = 168/394 (42%)
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
L NQ+ S+P +F L L L + N + + A L L +L L ++ + +
Sbjct: 2 LSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEE 61
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
+F GL LR L L DN L IP + L++L L+ + + N + F+ LS L L
Sbjct: 62 SFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLH 121
Query: 266 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
+ + + R+ F D GA+ L L L N +
Sbjct: 122 LHN-NRIQRLGANGF-DGLHNLETLDLNYNELLEFP-GAIRTLGRLQELGFHNNNIKAIP 178
Query: 326 ESMLAW-PELRTIDIAENPIE-CGCNILWLREMLVRRNTSAVFCNSPAPLK-YKSLI-SL 381
E+ P L+TI +NPI+ G + + L + +T ++ N ++ + L +
Sbjct: 179 ENAFVGNPLLQTIHFYDNPIQFVGQSAF---QYLPKLHTLSL--NGATDIREFPDLKGTT 233
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
S E L AG+ + + L LR L L+ N+++ +P+ + RLEEL + N
Sbjct: 234 SLEVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLPS--FHRCQRLEELGLQHNRI 291
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVG 501
+ A F L+ L+ ++++ +++ + AF + L G
Sbjct: 292 HEIRADTFVQLTALRSIDLSW-NDIHFIHPDAFVTLRSLTKLDLSDNRLAAL----PLGG 346
Query: 502 LPNLYHLNLKENAFTS--FSESMLAWPELRTIDI 533
L +L HL L+ N S F+E ++P+LR +++
Sbjct: 347 LGSLTHLKLQGNPALSEPFAED--SFPKLRVLEV 378
Score = 209 (78.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 93/347 (26%), Positives = 137/347 (39%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N+IS I F GL +L+IL L +NQL +P + L L LR+ N+ + + + +F
Sbjct: 5 NQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEESFE 64
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L L LT I A L L+++ L N++ IP L+ L L +
Sbjct: 65 GLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLHLHN 124
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N L A F GL L+ L++ + L GA I E A
Sbjct: 125 NRIQRLGANGFDGLHNLETLDLN-YNELLEF-PGAIR-TLGRLQELGFHNNNIKAIPENA 181
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAW-PELRTI------DIAENPIECGCN---ILWLR 354
VG P L ++ +N +S + P+L T+ DI E P G +L L
Sbjct: 182 FVGNPLLQTIHFYDNPIQFVGQSAFQYLPKLHTLSLNGATDIREFPDLKGTTSLEVLTLT 241
Query: 355 EMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
+R AV C L+ L EDL +F L L L
Sbjct: 242 RAGIRLLPRAV-CQQLPNLRVLELSHNKIEDLP------------SFHRCQRLEELGLQH 288
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 461
NR+ I +LT L +++ N + F L L +L+++
Sbjct: 289 NRIHEIRADTFVQLTALRSIDLSWNDIHFIHPDAFVTLRSLTKLDLS 335
Score = 178 (67.7 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 79/302 (26%), Positives = 133/302 (44%)
Query: 45 PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P++Q + L+ N+I + D A SL + L + + GF+ L L LN+N+
Sbjct: 91 PALQAMTLALNQIWRIPDYAFQNLSSLVVLHLHNNRIQRLGANGFDGLHNLETLDLNYNE 150
Query: 104 --HFPQQIVCSIISPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
FP I + R E+ F N I I + F G L+ ++ DN ++ V +F
Sbjct: 151 LLEFPGAI--RTLG-RLQELGFHNNNIKAIPENAFVGNPLLQTIHFYDNPIQFVGQSAFQ 207
Query: 161 YLGMLAELRVGLNVFTTLADGA-FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
YL L L LN T + + G L L L AG+ + + L LR L L+
Sbjct: 208 YLPKLHTL--SLNGATDIREFPDLKGTTSLEVLTLTRAGIRLLPRAVCQQLPNLRVLELS 265
Query: 220 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 279
N+++ +P+ + RLEEL + N + A F L+ L+ ++++ +++ + A
Sbjct: 266 HNKIEDLPS--FHRCQRLEELGLQHNRIHEIRADTFVQLTALRSIDLSW-NDIHFIHPDA 322
Query: 280 FADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS--FSESMLAWPELRTI 337
F L GL +L HL L+ N S F+E ++P+LR +
Sbjct: 323 FVTLRSLTKLDLSDNRLAAL----PLGGLGSLTHLKLQGNPALSEPFAED--SFPKLRVL 376
Query: 338 DI 339
++
Sbjct: 377 EV 378
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 90/345 (26%), Positives = 139/345 (40%)
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
++ + N++SRI L L+ L LD N + VP SF L L L + N T
Sbjct: 22 KILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEESFEGLQSLRHLWLDDNALTE 81
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ A N L L A+ L + I D AF+ LS L L L +NR+Q + L L
Sbjct: 82 IPVRALNRLPALQAMTLALNQIWRIPDYAFQNLSSLVVLHLHNNRIQRLGANGFDGLHNL 141
Query: 238 EELEIGQNGFSMLE-AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX 296
E L++ N +LE G + L L+ L +N+ + + AF
Sbjct: 142 ETLDLNYN--ELLEFPGAIRTLGRLQELGFHN-NNIKAIPENAFVGNPLLQTIHFYDNPI 198
Query: 297 XXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE--NPIECGCNIL--W 352
+ + A LP L+ L+L N T E +P+L+ E G +L
Sbjct: 199 QF-VGQSAFQYLPKLHTLSL--NGATDIRE----FPDLKGTTSLEVLTLTRAGIRLLPRA 251
Query: 353 LREMLVRRNTSAVFCNSPAPL-KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLV 411
+ + L + N L + L E+LG + I + F L+ LRS+
Sbjct: 252 VCQQLPNLRVLELSHNKIEDLPSFHRCQRL--EELGLQHNRIHEIRADTFVQLTALRSID 309
Query: 412 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
L+ N + I L L +L++ N + L G L++LK
Sbjct: 310 LSWNDIHFIHPDAFVTLRSLTKLDLSDNRLAALPLGGLGSLTHLK 354
Score = 150 (57.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 59/228 (25%), Positives = 106/228 (46%)
Query: 46 SIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
S++ L+L N++ + + A+ +LQ + L ++P FE + L L L+ N
Sbjct: 20 SLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPEESFEGLQSLRHLWLDDNAL 79
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
P + + + + + + + N+I RI F+ L++L +L+L +N+++ + F L
Sbjct: 80 TEIPVRALNRLPALQAMTL-ALNQIWRIPDYAFQNLSSLVVLHLHNNRIQRLGANGFDGL 138
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N GA LGRL L + I +NAF G L+++ DN
Sbjct: 139 HNLETLDLNYNELLEFP-GAIRTLGRLQELGFHNNNIKAIPENAFVGNPLLQTIHFYDNP 197
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSML-EAGCFKGLSYLKRLEITGA 269
+Q + L +L L + NG + + E KG + L+ L +T A
Sbjct: 198 IQFVGQSAFQYLPKLHTLSL--NGATDIREFPDLKGTTSLEVLTLTRA 243
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 74/346 (21%), Positives = 129/346 (37%)
Query: 169 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 228
R+ N +++ AF+GL L L L+ L+ I A R L L+SL L N + +P
Sbjct: 1 RLSGNQISSIPGEAFSGLYSLKILMLQNNQLSRIPAEALRDLPNLQSLRLDANLISVVPE 60
Query: 229 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 288
+ L L L + N + + L L+ + + + + R+ AF +
Sbjct: 61 ESFEGLQSLRHLWLDDNALTEIPVRALNRLPALQAMTLA-LNQIWRIPDYAFQNLSSLVV 119
Query: 289 XXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGC 348
G GL NL L+L N F ++ L+ + N I+
Sbjct: 120 LHLHNNRIQRLGANG-FDGLHNLETLDLNYNELLEFPGAIRTLGRLQELGFHNNNIKAIP 178
Query: 349 NILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA-FRGLSGL 407
++ L++ + F ++P +S + + G T+I + +G + L
Sbjct: 179 ENAFVGNPLLQ---TIHFYDNPIQFVGQSAFQYLPKLHTLSLNGATDIREFPDLKGTTSL 235
Query: 408 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 467
L LT ++ +P +L L LE+ N L + F L+ L + + +
Sbjct: 236 EVLTLTRAGIRLLPRAVCQQLPNLRVLELSHNKIEDLPS--FHRCQRLEELGLQH-NRIH 292
Query: 468 RVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN 513
+R F I DA V L +L L+L +N
Sbjct: 293 EIRADTFVQLTALRSIDLSWNDIH-FIHPDAFVTLRSLTKLDLSDN 337
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 71/223 (31%), Positives = 100/223 (44%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAI--PIYLSLQHVDLSHTTWLIIP 84
P+ + Q N +P PS QRL L N I+++ P L+L + +T I P
Sbjct: 42 PTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRSLRPGTFGPNLLTLWLFSNNLST--IYP 99
Query: 85 IGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR--ISRIDQACFEGLTALR 142
G F + L EL L N+H + R++ R +S + F GL +L+
Sbjct: 100 -GTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQ 158
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
LYL +N L + F L L+ L + N L + F GLG L L L G L +
Sbjct: 159 YLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGV 218
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
AF GLS L L L +N L S+P + L+ L LE L + N
Sbjct: 219 HRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFLRLNAN 261
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 70/263 (26%), Positives = 106/263 (40%)
Query: 114 ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
+ P +F QN + R + G L L+L N L ++ +F +L L EL +G N
Sbjct: 58 LPPSTQRLFLQNNLIRSLRPGTFGPNLLT-LWLFSNNLSTIYPGTFRHLQALEELDLGDN 116
Query: 174 V-FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
+L F GL RL +L L L+++ N FRGL L+ L L +N L + +
Sbjct: 117 RHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFA 176
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
L L L + N +L F+GL L RL + G + L V + AF
Sbjct: 177 DLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHG-NRLQGVHRAAFHGLSRLTILYLF 235
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILW 352
E AL LP L L L N + + W + ++ + + C
Sbjct: 236 NNSLASLPGE-ALADLPALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPER 294
Query: 353 L-REMLVRRNTSAVFCNSPAPLK 374
R++ R+T C P P +
Sbjct: 295 QGRDLRTLRDTDFQACPPPTPTR 317
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 73/273 (26%), Positives = 109/273 (39%)
Query: 144 LYLDDNQLRSVPTPSFIYLGM-LAELRVGLNVFTTLADGAFNGLGRLSALDLR-GAGLTN 201
L+L +N +RS+ +F G L L + N +T+ G F L L LDL L +
Sbjct: 65 LFLQNNLIRSLRPGTF---GPNLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRS 121
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
+ + F+GL L+SL L +L S+P L L+ L + +N L+ F L+ L
Sbjct: 122 LEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANL 181
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
L + G + L + + F + A GL L L L N+
Sbjct: 182 SHLFLHG-NRLRLLTEHVFRGLGSLDRLLLHGNRLQG-VHRAAFHGLSRLTILYLFNNSL 239
Query: 322 TSF-SESMLAWPELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYKSL 378
S E++ P L + + NP C C LW R ++S V C +P + + L
Sbjct: 240 ASLPGEALADLPALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDL 299
Query: 379 ISLSAEDL-GCAGAGLTNISDNAFRGLSGLRSL 410
+L D C T A RG S L
Sbjct: 300 RTLRDTDFQACPPPTPTRPGSRA-RGNSSSNHL 331
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 61/236 (25%), Positives = 95/236 (40%)
Query: 347 GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
G N+L L L N S ++ P ++ L +L DLG L ++ + F+GL
Sbjct: 81 GPNLLTL--WLFSNNLSTIY-----PGTFRHLQALEELDLG-DNRHLRSLEPDTFQGLER 132
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
L+SL L +L S+P L L+ L + +N L+ F L+ L L + G + L
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHG-NRL 191
Query: 467 TRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAW 525
+ + F + A GL L L L N+ S E++
Sbjct: 192 RLLTEHVFRGLGSLDRLLLHGNRLQGV-HRAAFHGLSRLTILYLFNNSLASLPGEALADL 250
Query: 526 PELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 579
P L + + NP C C LW R ++S V C +P + + L +L D
Sbjct: 251 PALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDLRTLRDTD 306
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 44/177 (24%), Positives = 69/177 (38%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
L+++ N FRGL L+ L L +N L + + L L L + N +L F+GL
Sbjct: 143 LSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 202
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
L RL + G + L V + AF + E AL LP L L L
Sbjct: 203 GSLDRLLLHG-NRLQGVHRAAFHGLSRLTILYLFNNSLASLPGE-ALADLPALEFLRLNA 260
Query: 513 NAFTSFSESMLAWPELRTIDIAENPIECGCNILWL-REMLVRRNTSAVFCNSPAPLK 568
N + + W + ++ + + C R++ R+T C P P +
Sbjct: 261 NPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDLRTLRDTDFQACPPPTPTR 317
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 93/338 (27%), Positives = 142/338 (42%)
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTA-LRILYLDDNQLRSVPTPSFIYLGMLAEL 168
VC S R R+ I GL +L L N+L + LG L EL
Sbjct: 34 VCDCTSQTRAVFCAHRRLDTIPG----GLPLDTELLDLSGNRLWGLQRGMLSRLGQLQEL 89
Query: 169 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 228
+ N +TL GAF+GL L L L+G L + F GL+ L L L N++
Sbjct: 90 DLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLD 149
Query: 229 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 288
S+L L++LE+G N + G F GL+ L + + NL+ V A A
Sbjct: 150 GAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERC-NLSTVPGLALAQLPALVA 208
Query: 289 XXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESMLAWPELRTIDIAE-N---- 342
+ GAL GL L L + + + L L ++ I N
Sbjct: 209 LRLRELDIER-LPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLNLSSLAITRCNLSSV 267
Query: 343 PIECGCNILWLREMLVRRNT-SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAF 401
P + ++ +LR + + +N SA+ PA + L+ L ++L +GA LT+I+ +AF
Sbjct: 268 PFQALHHLSFLRILDLSQNPISAI----PAR-RLSPLVRL--QELRLSGACLTSIAAHAF 320
Query: 402 RGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
GL+ L + DN LQ++ +L L + N
Sbjct: 321 HGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGN 358
Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 62/223 (27%), Positives = 102/223 (45%)
Query: 44 NPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
+P + L+L I + + + V +H IP GG +L++L N
Sbjct: 15 SPLLFLLLLPGGSISSCPTVCDCTSQTRAVFCAHRRLDTIP-GGLPLDTELLDLSGNRLW 73
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
+ ++ + + +++ N++S ++ F GL +L L L N+LR V F L
Sbjct: 74 GLQRGMLSRLGQLQELDL-SYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLT 132
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + LN DGAF+ LG L L++ L ++ AF GL+ L ++ L L
Sbjct: 133 ALTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNL 192
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
++P L++L L L + + L AG +GL LK LEI
Sbjct: 193 STVPGLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEI 235
Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 74/290 (25%), Positives = 120/290 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL G L + L L+ L L+ N+L ++ L L L + N ++
Sbjct: 65 LDLSGNRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVG 124
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GL+ L L++ + + GAF++ + GA GL L
Sbjct: 125 PGIFSGLTALTLLDLR-LNQIVLFLDGAFSELGSLQQLEVGDNHLVF-VAPGAFAGLAKL 182
Query: 312 YHLNLKE-NAFTSFSESMLAWP-----ELRTIDIAENPIECGCNILWLREMLVRRNTSAV 365
+ L+ N T ++ P LR +DI P + L+E+ + S
Sbjct: 183 STITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLE 242
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
+ P SL+ L+ L L+++ A LS LR L L+ N + +IP ++L
Sbjct: 243 ALD-PG-----SLVGLNLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRL 296
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN-LTRVRKGAF 474
S L RL+EL + + + A F GL+ L++ A N L + + AF
Sbjct: 297 SPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDV--ADNALQTLEETAF 344
Score = 150 (57.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 75/263 (28%), Positives = 117/263 (44%)
Query: 26 DPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIP 84
D S N Q + L+ H S+ L L NR++ V I L+ L +DL ++
Sbjct: 90 DLSYN-QLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFL 148
Query: 85 IGGFEPQEKLVELQLNHNKHF----PQQIV-CSIISPRRVEIFGQNRISRIDQACFEGLT 139
G F L +L++ N H P + +S +E + + + A L
Sbjct: 149 DGAFSELGSLQQLEVGDN-HLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALV 207
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNVFTTLADGAFNGLGRLSALDLRGAG 198
ALR+ LD +L P + LG L EL + L G+ GL LS+L +
Sbjct: 208 ALRLRELDIERL---PAGALRGLGQLKELEIHHWPSLEALDPGSLVGLN-LSSLAITRCN 263
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
L+++ A LS LR L L+ N + +IP ++LS L RL+EL + + + A F GL
Sbjct: 264 LSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGL 323
Query: 259 SYLKRLEITGASN-LTRVRKGAF 280
+ L++ A N L + + AF
Sbjct: 324 TAFHLLDV--ADNALQTLEETAF 344
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 85/374 (22%), Positives = 149/374 (39%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S R++ RL +IP L T L L++ N L+ G L L+ L+++ +
Sbjct: 39 SQTRAVFCAHRRLDTIPGG-LPLDTEL--LDLSGNRLWGLQRGMLSRLGQLQELDLS-YN 94
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
L+ + GAF + G GL L L+L+ N F + +
Sbjct: 95 QLSTLEPGAF-HGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFS 153
Query: 331 -WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF-CN-SPAP-LKYKSLISLSAEDL 386
L+ +++ +N + + L + +T + CN S P L L +L A L
Sbjct: 154 ELGSLQQLEVGDNHLVFVAPGAFAG--LAKLSTITLERCNLSTVPGLALAQLPALVA--L 209
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 445
+ + A RGL L+ L + L+++ L L L L I + S +
Sbjct: 210 RLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLN-LSSLAITRCNLSSVP 268
Query: 446 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNL 505
LS+L+ L+++ + ++ + + I A GL
Sbjct: 269 FQALHHLSFLRILDLS-QNPISAIPARRLSPLVRLQELRLSGACLTSIAAH-AFHGLTAF 326
Query: 506 YHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCN 562
+ L++ +NA + E+ P+ L T+ ++ NP+ C C +LWL + R + TS C
Sbjct: 327 HLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRLLWLLRLRRRLDFGTSPPACA 386
Query: 563 SPAPLKYKSLISLS 576
P ++ KSL S
Sbjct: 387 GPQHVQGKSLREFS 400
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 210 (79.0 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 100/379 (26%), Positives = 156/379 (41%)
Query: 19 PSRFSTRDPSCNL-QEANLDVIPSHSN-PSIQRLV---LSTNRIKTVDSAIPIYL--SLQ 71
P R + P L L +P S+ PS Q ++ L N I + +A + L+
Sbjct: 28 PERCDCQHPQHLLCTNRGLRAVPKTSSLPSPQDVLTYSLGGNFITNI-TAFDFHRLGQLR 86
Query: 72 HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISP-RRVEIF--GQNRIS 128
+DL + + FE +L EL L +N Q + ++P R++ I N I
Sbjct: 87 RLDLQYNQIRSLHPKTFEKLSRLEELYLGNN--LLQALAPGTLAPLRKLRILYANGNEIG 144
Query: 129 RIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR 188
R+ + FEGL +L L LD N L ++P F LG L L + N L AF LG+
Sbjct: 145 RLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLEANRIRFLGKNAFTQLGK 204
Query: 189 LSALDLRGAGLTNISDNA--FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 246
L L+L L +A F L L +L+L+ N LQ + + L RL L + N
Sbjct: 205 LRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHLPRLGLLSLSGNQ 264
Query: 247 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV 306
+ L F GL L+ L + G + L ++ + +
Sbjct: 265 LTHLAPEAFWGLEALRELRLEG-NRLNQLPL-TLLEPLHSLEALDLSGNELSALHPATFG 322
Query: 307 GLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSA- 364
L L+L++NA ++ S + A P L +D+ N C C + L+ + ++
Sbjct: 323 HQGRLRELSLRDNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGNWHSQGR 382
Query: 365 ---VF--CNSPAPLKYKSL 378
VF C P L+ K L
Sbjct: 383 LLTVFVQCRHPPALRGKYL 401
Score = 203 (76.5 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 75/271 (27%), Positives = 117/271 (43%)
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
L G +TNI+ F L LR L L N+++S+ K KL+RLEEL +G N L G
Sbjct: 66 LGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPG 125
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYH 313
L L+ L G + + R+ +G+F + + + L NL +
Sbjct: 126 TLAPLRKLRILYANG-NEIGRLSRGSF-EGLESLVKLRLDGNVLGALPDAVFAPLGNLLY 183
Query: 314 LNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP-- 370
L+L+ N ++ +LR ++++ N ++ L +T + NS
Sbjct: 184 LHLEANRIRFLGKNAFTQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQH 243
Query: 371 -APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
P ++ L L L +G LT+++ AF GL LR L L NRL +P L L
Sbjct: 244 LGPRVFQHLPRLGL--LSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLH 301
Query: 430 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
LE L++ N S L F L+ L +
Sbjct: 302 SLEALDLSGNELSALHPATFGHQGRLRELSL 332
Score = 121 (47.7 bits), Expect = 0.00082, P = 0.00082
Identities = 40/151 (26%), Positives = 69/151 (45%)
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
G +TNI+ F L LR L L N+++S+ K KL+RLEEL +G N L G
Sbjct: 68 GNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTL 127
Query: 450 KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLN 509
L L+ L G + + R+ +G+F + + + L NL +L+
Sbjct: 128 APLRKLRILYANG-NEIGRLSRGSF-EGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLH 185
Query: 510 LKENAFTSFSESMLAW-PELRTIDIAENPIE 539
L+ N ++ +LR ++++ N ++
Sbjct: 186 LEANRIRFLGKNAFTQLGKLRFLNLSANELQ 216
>UNIPROTKB|D8MCT0 [details] [associations]
symbol:LGR5 "Leucine-rich repeat-containing G
protein-coupled receptor 5" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0016500 EMBL:AC078860 EMBL:AC090116 HGNC:HGNC:4504
EMBL:FN820440 IPI:IPI00970955 SMR:D8MCT0 Ensembl:ENST00000536515
UCSC:uc021rar.1 Uniprot:D8MCT0
Length = 835
Score = 210 (79.0 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 93/316 (29%), Positives = 132/316 (41%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ I + F GL +L++L L +NQLR VPT + L L L + N +L F+
Sbjct: 100 NALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIHSLGKKCFD 159
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L LDL L A R LS L+ L N ++SIP K L +
Sbjct: 160 GLHSLETLDLNYNNLDEFP-TAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYD 218
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX--XXIEE 302
N + F+ L L+ L + GAS +T F D + +
Sbjct: 219 NPIQFVGRSAFQHLPELRTLTLNGASQITE-----FPDLTGTANLESLTLTGAQISSLPQ 273
Query: 303 GALVGLPNLYHLNLKENAFT---SFSESM-LAWPELRTIDIAENPIECGCNILWLREMLV 358
LPNL L+L N SFS L +LR +I E ++ +L LR + +
Sbjct: 274 TVCNQLPNLQVLDLSYNLLEDLPSFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNL 333
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNR-L 417
N A+ P + +L SL DL + L +S GL GL L LT N L
Sbjct: 334 AWNKIAII----HPNAFSTLPSLIKLDLS---SNL--LSSFPITGLHGLTHLKLTGNHAL 384
Query: 418 QS-IPTKQLSKLTRLE 432
QS I ++ +L +E
Sbjct: 385 QSLISSENFPELKVIE 400
Score = 172 (65.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 82/320 (25%), Positives = 130/320 (40%)
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRL-----------SALDLRGAGLTNISDNAFRGL 210
LG L+EL L+VFT+ D + N + +L L L G LT I AF GL
Sbjct: 55 LG-LSELPSNLSVFTSYLDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGL 113
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
L+ L+L +N+L+ +PT+ L L L+ L + N L CF GL L+ L++ +
Sbjct: 114 YSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIHSLGKKCFDGLHSLETLDLN-YN 172
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
NL I E A VG P+L ++ +N S
Sbjct: 173 NLDEFPTAI--RTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQ 230
Query: 331 W-PELRTIDI-AENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
PELRT+ + + I ++ + T A + P + L +L DL
Sbjct: 231 HLPELRTLTLNGASQITEFPDLTGTANLESLTLTGAQISSLPQTV-CNQLPNLQVLDLSY 289
Query: 389 AGAGLTNISDN--AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 446
N+ ++ +F L+ + L N + I +L L L + N +++
Sbjct: 290 ------NLLEDLPSFSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAWNKIAIIHP 343
Query: 447 GCFKGLSYLKRLEITGASNL 466
F L L +L+++ SNL
Sbjct: 344 NAFSTLPSLIKLDLS--SNL 361
Score = 160 (61.4 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 73/299 (24%), Positives = 129/299 (43%)
Query: 46 SIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
S++ L+L N+++ V + A+ SLQ + L + + F+ L L LN+N
Sbjct: 115 SLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNL 174
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
FP I +S + F N I I + F G +L ++ DN ++ V +F +L
Sbjct: 175 DEFPTAI--RTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHL 232
Query: 163 GMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L + G + T D G L +L L GA ++++ L L+ L L+ N
Sbjct: 233 PELRTLTLNGASQITEFPD--LTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYN 290
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
L+ +P+ S +L+++++ N ++ F+ L L+ L + + + + AF+
Sbjct: 291 LLEDLPS--FSVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAW-NKIAIIHPNAFS 347
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN-AFTSFSESMLAWPELRTIDI 339
+ + GL L HL L N A S S +PEL+ I++
Sbjct: 348 ----TLPSLIKLDLSSNLLSSFPITGLHGLTHLKLTGNHALQSLISSE-NFPELKVIEM 401
Score = 150 (57.9 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 62/239 (25%), Positives = 106/239 (44%)
Query: 33 EANLDVIPSHSNPSIQRLVLSTNRI-KTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ 91
+ L +PS+ + L LS N I + + + +P L+ + L+ IP G F
Sbjct: 54 DLGLSELPSNLSVFTSYLDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGL 113
Query: 92 EKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
L L L +N +H P + + ++ S + + + NRI + + CF+GL +L L L+ N
Sbjct: 114 YSLKVLMLQNNQLRHVPTEALQNLRSLQSLHLHN-NRIHSLGKKCFDGLHSLETLDLNYN 172
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
L PT + L L EL N ++ + AF G L + + + +AF+
Sbjct: 173 NLDEFPT-AIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQH 231
Query: 210 LSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 267
L LR+L L +++ P L+ LE L + S L L L+ L+++
Sbjct: 232 LPELRTLTLNGASQITEFP--DLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLS 288
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 80/340 (23%), Positives = 129/340 (37%)
Query: 187 GR-LSALDLRGAGLTNISDNAFRGLSGLRS-LVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GR L +D GL+ + N LS S L L+ N + + L L LEEL +
Sbjct: 44 GRMLLRVDCSDLGLSELPSN----LSVFTSYLDLSMNNISQLLPNPLPSLRFLEELRLAG 99
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N + + G F GL LK L + + L V A + + +
Sbjct: 100 NALTYIPKGAFTGLYSLKVLMLQN-NQLRHVPTEALQNLRSLQSLHLHNNRIHS-LGKKC 157
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA 364
GL +L L+L N F ++ L+ + N NI + E N S
Sbjct: 158 FDGLHSLETLDLNYNNLDEFPTAIRTLSNLKELGFHSN------NIRSIPEKAFVGNPSL 211
Query: 365 V---FCNSPAPLKYKSLISLSAE--DLGCAGAG-LTNISDNAFRGLSGLRSLVLTDNRLQ 418
+ F ++P +S E L GA +T D G + L SL LT ++
Sbjct: 212 ITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPD--LTGTANLESLTLTGAQIS 269
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
S+P ++L L+ L++ N L + F L+++++ + + ++ F
Sbjct: 270 SLPQTVCNQLPNLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRH-NEIYEIKVDTFQQLL 326
Query: 479 XXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF 518
II +A LP+L L+L N +SF
Sbjct: 327 SLRSLNLAWNKIA-IIHPNAFSTLPSLIKLDLSSNLLSSF 365
Score = 122 (48.0 bits), Expect = 0.00067, P = 0.00067
Identities = 77/349 (22%), Positives = 135/349 (38%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 249
S LDL ++ + N L L L L N L IP + L L+ L + N
Sbjct: 69 SYLDLSMNNISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRH 128
Query: 250 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP 309
+ + L L+ L + + + + K F D A+ L
Sbjct: 129 VPTEALQNLRSLQSLHLHN-NRIHSLGKKCF-DGLHSLETLDLNYNNLDEFPT-AIRTLS 185
Query: 310 NLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRNTSAVFC 367
NL L N S E + + P L TI +NPI+ G + + L T +
Sbjct: 186 NLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSAF---QHLPELRTLTL-- 240
Query: 368 NSPAPL-KYKSLI-SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
N + + ++ L + + E L GA ++++ L L+ L L+ N L+ +P+
Sbjct: 241 NGASQITEFPDLTGTANLESLTLTGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPS--F 298
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
S +L+++++ N ++ F+ L L+ L + + + + AF+
Sbjct: 299 SVCQKLQKIDLRHNEIYEIKVDTFQQLLSLRSLNLAW-NKIAIIHPNAFS----TLPSLI 353
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKEN-AFTSFSESMLAWPELRTIDI 533
++ + GL L HL L N A S S +PEL+ I++
Sbjct: 354 KLDLSSNLLSSFPITGLHGLTHLKLTGNHALQSLISSE-NFPELKVIEM 401
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 208 (78.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 86/355 (24%), Positives = 149/355 (41%)
Query: 30 NLQEANLDVIPSHSNPSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGF 88
N + L IP + S L L+ N I + +S + SL + L ++ L + F
Sbjct: 45 NCRNLGLSSIPKNFPESTVFLYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAF 104
Query: 89 EPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
L L LN+N K I +++ R + + N++S + + F L +++ L L
Sbjct: 105 VQLRHLYFLFLNNNFIKRLDPGIFKGLLNLRNLYL-QYNQVSFVPRGVFNDLVSVQYLNL 163
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
N+L + + +F+ + L L + N +++ F L L+ L L LT + NA
Sbjct: 164 QRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNA 223
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F L LR L L+ N +++I L LE L + + + F G++ LK L I
Sbjct: 224 FEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHL-I 282
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL-PNLYHLNLKENAFTSFS 325
++L + F+ I+ + +L LNL N T+
Sbjct: 283 LSHNDLENLNSDTFS-LLKNLIYLKLDRNRIISIDNDTFENMGASLKILNLSFNNLTALH 341
Query: 326 ESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRN-TSAVFCNSPAPLKYKSL 378
+L L + NP EC C +L LR+ L T ++C +P ++ ++L
Sbjct: 342 PRVLKPLSSLIHLQANSNPWECNCKLLGLRDWLASSAITLNIYCQNPPSMRGRAL 396
Score = 169 (64.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 69/279 (24%), Positives = 126/279 (45%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L G ++ I+++ GL L +L L ++ + + K +L L L + N L+
Sbjct: 65 LYLTGNNISYINESELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLD 124
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G FKGL L+ L + + ++ V +G F D + G VG+ L
Sbjct: 125 PGIFKGLLNLRNLYLQ-YNQVSFVPRGVFNDLVSVQYLNLQRNRLTV-LGSGTFVGMVAL 182
Query: 312 YHLNLKENAFTSFSESMLAWPE-LRTIDIAENPI-ECGCNILWLREMLVRRNTSAVFCNS 369
L+L N SES E L + + N + + N + + L R + S +
Sbjct: 183 RILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEA 242
Query: 370 PAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
P +K L +L E L + + N++ + F G++ L+ L+L+ N L+++ + S L
Sbjct: 243 IQPFAFKGLANL--EYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLK 300
Query: 430 RLEELEIGQNGFSMLEAGCFKGL-SYLKRLEITGASNLT 467
L L++ +N ++ F+ + + LK L ++ +NLT
Sbjct: 301 NLIYLKLDRNRIISIDNDTFENMGASLKILNLS-FNNLT 338
Score = 138 (53.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 51/195 (26%), Positives = 81/195 (41%)
Query: 384 EDLGCAGAG---LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
E+L C G LT + NAF L LR L L+ N +++I L LE L + +
Sbjct: 204 ENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSR 263
Query: 441 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALV 500
+ F G++ LK L I ++L + F+ I+ D
Sbjct: 264 IRNVTRDGFSGINNLKHL-ILSHNDLENLNSDTFS-LLKNLIYLKLDRNRIISIDNDTFE 321
Query: 501 GL-PNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRN-TS 557
+ +L LNL N T+ +L L + NP EC C +L LR+ L T
Sbjct: 322 NMGASLKILNLSFNNLTALHPRVLKPLSSLIHLQANSNPWECNCKLLGLRDWLASSAITL 381
Query: 558 AVFCNSPAPLKYKSL 572
++C +P ++ ++L
Sbjct: 382 NIYCQNPPSMRGRAL 396
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 208 (78.3 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 77/272 (28%), Positives = 113/272 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 85 ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 144
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL I L+ L L +
Sbjct: 145 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
++ E L L L+++G ++L+ +R G+F IE
Sbjct: 205 AM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF-QGLMHLQKLWMIQSQIQVIER 260
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L +NL N T + P L I + NP C C+ILWL R+M
Sbjct: 261 NAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIHLHHNPWNCNCDILWLSWWIRDM 319
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
CN+P LK + + L C
Sbjct: 320 APSNTACCARCNTPPNLKGRYIGELDQNYFTC 351
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 71/233 (30%), Positives = 104/233 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NL E + +I +S ++ L LS N I+T++ A +L ++
Sbjct: 71 PDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 130
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G F KL EL L +N + P I S RR+++ R+S I +
Sbjct: 131 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 190
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
FEGL+ LR L L LR +P + L L EL + N + + G+F GL L L
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ + + I NAF L L + L N L +P + L LE + + N
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 193 (73.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 136 EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ T R+L L +NQ++ + SF +L L L++ N T+ GAFNGL L+ L+L
Sbjct: 72 DGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAG 253
LT I + AF LS L+ L L +N ++SIP+ +++ L L++G+ S + G
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 254 CFKGLSYLKRLEITGASNLTRV 275
F+GLS L+ L + NL +
Sbjct: 192 AFEGLSNLRYLNLA-MCNLREI 212
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/246 (23%), Positives = 103/246 (41%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
++ L+ +P +S TRL L + +N +++ FK L +L+ L+++ +++ +
Sbjct: 60 VICVRKNLREVPDG-ISTNTRL--LNLHENQIQIIKVNSFKHLRHLEILQLS-RNHIRTI 115
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA V L L L L+ N S S + P L
Sbjct: 116 EIGAF-NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSL 174
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
R +D+ E + + R + CN LI L DL +G L+
Sbjct: 175 RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDL--SGNHLS 232
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I +F+GL L+ L + +++Q I L L E+ + N ++L F L +
Sbjct: 233 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Query: 455 LKRLEI 460
L+R+ +
Sbjct: 293 LERIHL 298
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 57/220 (25%), Positives = 88/220 (40%)
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD- 414
L NT +F N + + + LS ++L + +I AF + LR L L +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL I L+ L L + ++ E L L L+++G ++L+ +R G+F
Sbjct: 183 KRLSYISEGAFEGLSNLRYLNLAM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF 239
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTID 532
+IE +A L +L +NL N T + P L I
Sbjct: 240 -QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIH 297
Query: 533 IAENPIECGCNILWL----REMLVRRNTSAVFCNSPAPLK 568
+ NP C C+ILWL R+M CN+P LK
Sbjct: 298 LHHNPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPNLK 337
Score = 131 (51.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 57/237 (24%), Positives = 103/237 (43%)
Query: 35 NLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVD---LSHTTWLIIPIGGFEPQ 91
NL +P + + + L L N+I+ + + + L+H++ LS I IG F
Sbjct: 66 NLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 92 EKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDD-N 149
L L+L N+ + + E++ +N I I F + +LR L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
+L + +F L L L + + + + L +L LDL G L+ I +F+G
Sbjct: 184 RLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L L+ L + +++Q I L L E+ + N ++L F L +L+R+ +
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/191 (24%), Positives = 83/191 (43%)
Query: 90 PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
PQ+ ++ + N P +V +++ + + + G R C +++ + N
Sbjct: 9 PQQIMIGPRFNRALFDPLLVV--LLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKN 66
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
LR VP +L + N + +F L L L L + I AF G
Sbjct: 67 -LREVPDGISTNTRLL---NLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNG 122
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L+ L +L L DNRL +IP L++L+EL + N + + F + L+RL++
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 270 SNLTRVRKGAF 280
L+ + +GAF
Sbjct: 183 KRLSYISEGAF 193
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 208 (78.3 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 77/272 (28%), Positives = 113/272 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 85 ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 144
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL I L+ L L +
Sbjct: 145 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
++ E L L L+++G ++L+ +R G+F IE
Sbjct: 205 AM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF-QGLMHLQKLWMIQSQIQVIER 260
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L +NL N T + P L I + NP C C+ILWL R+M
Sbjct: 261 NAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIHLHHNPWNCNCDILWLSWWIRDM 319
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
CN+P LK + + L C
Sbjct: 320 APSNTACCARCNTPPNLKGRYIGELDQNYFTC 351
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 71/233 (30%), Positives = 104/233 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NL E + +I +S ++ L LS N I+T++ A +L ++
Sbjct: 71 PDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 130
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G F KL EL L +N + P I S RR+++ R+S I +
Sbjct: 131 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 190
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
FEGL+ LR L L LR +P + L L EL + N + + G+F GL L L
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ + + I NAF L L + L N L +P + L LE + + N
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 193 (73.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 136 EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ T R+L L +NQ++ + SF +L L L++ N T+ GAFNGL L+ L+L
Sbjct: 72 DGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAG 253
LT I + AF LS L+ L L +N ++SIP+ +++ L L++G+ S + G
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 254 CFKGLSYLKRLEITGASNLTRV 275
F+GLS L+ L + NL +
Sbjct: 192 AFEGLSNLRYLNLA-MCNLREI 212
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/246 (23%), Positives = 103/246 (41%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
++ L+ +P +S TRL L + +N +++ FK L +L+ L+++ +++ +
Sbjct: 60 VICVRKNLREVPDG-ISTNTRL--LNLHENQIQIIKVNSFKHLRHLEILQLS-RNHIRTI 115
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA V L L L L+ N S S + P L
Sbjct: 116 EIGAF-NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSL 174
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
R +D+ E + + R + CN LI L DL +G L+
Sbjct: 175 RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDL--SGNHLS 232
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I +F+GL L+ L + +++Q I L L E+ + N ++L F L +
Sbjct: 233 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Query: 455 LKRLEI 460
L+R+ +
Sbjct: 293 LERIHL 298
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 57/220 (25%), Positives = 88/220 (40%)
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD- 414
L NT +F N + + + LS ++L + +I AF + LR L L +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL I L+ L L + ++ E L L L+++G ++L+ +R G+F
Sbjct: 183 KRLSYISEGAFEGLSNLRYLNLAM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF 239
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTID 532
+IE +A L +L +NL N T + P L I
Sbjct: 240 -QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIH 297
Query: 533 IAENPIECGCNILWL----REMLVRRNTSAVFCNSPAPLK 568
+ NP C C+ILWL R+M CN+P LK
Sbjct: 298 LHHNPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPNLK 337
Score = 131 (51.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 57/237 (24%), Positives = 103/237 (43%)
Query: 35 NLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVD---LSHTTWLIIPIGGFEPQ 91
NL +P + + + L L N+I+ + + + L+H++ LS I IG F
Sbjct: 66 NLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 92 EKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDD-N 149
L L+L N+ + + E++ +N I I F + +LR L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
+L + +F L L L + + + + L +L LDL G L+ I +F+G
Sbjct: 184 RLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L L+ L + +++Q I L L E+ + N ++L F L +L+R+ +
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/191 (24%), Positives = 83/191 (43%)
Query: 90 PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
PQ+ ++ + N P +V +++ + + + G R C +++ + N
Sbjct: 9 PQQIMIGPRFNRALFDPLLVV--LLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKN 66
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
LR VP +L + N + +F L L L L + I AF G
Sbjct: 67 -LREVPDGISTNTRLL---NLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNG 122
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L+ L +L L DNRL +IP L++L+EL + N + + F + L+RL++
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 270 SNLTRVRKGAF 280
L+ + +GAF
Sbjct: 183 KRLSYISEGAF 193
>UNIPROTKB|F1P9F0 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:DGYWSDC EMBL:AAEX03013024
Ensembl:ENSCAFT00000016178 Uniprot:F1P9F0
Length = 905
Score = 210 (79.0 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 96/396 (24%), Positives = 169/396 (42%)
Query: 69 SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRI 127
+L+ + +++ T L P F+ L EL+L N F S + +V N++
Sbjct: 14 ALRDISMNNITQL--PEDAFKNFPFLEELRLAGNDLSFIHPKALSGLKELKVLTLQNNQL 71
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
+ GL+AL+ L LD N + SVP SF L L L + N + + L
Sbjct: 72 KTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLAQLRHLWLDDNSLMEVPVHPLSNLP 131
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L AL L +++I D AF LS L L L +N+++++ L LE L++ N
Sbjct: 132 TLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDNLETLDLNYNNL 191
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
K L LK L + +++++ + GAF D + A
Sbjct: 192 GEFPQA-IKALPSLKEL-LFHSNSISVIPDGAF-DGNPLLRTIHLYDNPLSFVGNSAFHN 248
Query: 308 LPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L +L+ L ++ + ++ L ++ + I + L + ++R T +
Sbjct: 249 LSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSISSNLCQEQKMLR--TLDLSY 306
Query: 368 NSPAPL-KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 426
NS L + +L E++ + I + F+GL LR L L+ N++ I + +
Sbjct: 307 NSIKDLPSFDGCHAL--EEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIHNRAFA 364
Query: 427 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
KL + L+I F+ L + +GLS L +L++ G
Sbjct: 365 KLGSITNLDIS---FNELTSFPTEGLSGLNQLKLVG 397
Score = 201 (75.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 84/298 (28%), Positives = 137/298 (45%)
Query: 31 LQEANLDVIPSH--SN-PSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIG 86
L + +L +P H SN P++Q L L+ N+I ++ D A SL + L + +
Sbjct: 114 LDDNSLMEVPVHPLSNLPTLQALTLALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQH 173
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
F+ + L L LN+N FPQ I ++ S + + +F N IS I F+G LR +
Sbjct: 174 CFDGLDNLETLDLNYNNLGEFPQAIK-ALPSLKEL-LFHSNSISVIPDGAFDGNPLLRTI 231
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRV-GLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
+L DN L V +F L L L + G ++ + G L +L L G +++IS
Sbjct: 232 HLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPN--LTGTVHLESLTLTGTKISSIS 289
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
N + LR+L L+ N ++ +P+ LEE+ + +N ++ G F+GL L+
Sbjct: 290 SNLCQEQKMLRTLDLSYNSIKDLPS--FDGCHALEEISLQRNQIHQIKEGTFQGLVSLRI 347
Query: 264 LEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLY---HLNLKE 318
L+++ + + + AFA EG L GL L +L LKE
Sbjct: 348 LDLS-RNQIHEIHNRAFAKLGSITNLDISFNELTSFPTEG-LSGLNQLKLVGNLKLKE 403
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 64/225 (28%), Positives = 102/225 (45%)
Query: 50 LVLSTNRIKTVDS-AIPIYLSLQ--HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--H 104
L L N++KTV S AI +LQ +D +H T +P FE +L L L+ N
Sbjct: 64 LTLQNNQLKTVPSEAIRGLSALQSLRLDANHIT--SVPEDSFEGLAQLRHLWLDDNSLME 121
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
P + ++ + + + + N+IS I F L++L +L+L +N+++++ F L
Sbjct: 122 VPVHPLSNLPTLQALTL-ALNKISSIPDYAFTNLSSLVVLHLHNNKIKNLGQHCFDGLDN 180
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L L + N A L L L ++ I D AF G LR++ L DN L
Sbjct: 181 LETLDLNYNNLGEFPQ-AIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLS 239
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEA-GCFKGLSYLKRLEITG 268
+ L+ L L I G SM++ G +L+ L +TG
Sbjct: 240 FVGNSAFHNLSDLHSLVI--RGASMVQQFPNLTGTVHLESLTLTG 282
Score = 122 (48.0 bits), Expect = 0.00074, P = 0.00074
Identities = 55/215 (25%), Positives = 89/215 (41%)
Query: 30 NLQEANLDVIPS--HSNPSIQRLVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIG 86
+L NL P + PS++ L+ +N I + D A L+ + L +
Sbjct: 185 DLNYNNLGEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLLRTIHLYDNPLSFVGNS 244
Query: 87 GFEPQEKLVELQLNHN---KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
F L L + + FP + + + + G +IS I + LR
Sbjct: 245 AFHNLSDLHSLVIRGASMVQQFPN--LTGTVHLESLTLTG-TKISSISSNLCQEQKMLRT 301
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N ++ +P SF L E+ + N + +G F GL L LDL + I
Sbjct: 302 LDLSYNSIKDLP--SFDGCHALEEISLQRNQIHQIKEGTFQGLVSLRILDLSRNQIHEIH 359
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
+ AF L + +L ++ N L S PT+ LS L +L+
Sbjct: 360 NRAFAKLGSITNLDISFNELTSFPTEGLSGLNQLK 394
>UNIPROTKB|Q8IW52 [details] [associations]
symbol:SLITRK4 "SLIT and NTRK-like protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL080239 EMBL:CH471170 EMBL:BC040986
EMBL:AL713693 EMBL:AK057619 IPI:IPI00217146 RefSeq:NP_001171678.1
RefSeq:NP_001171679.1 RefSeq:NP_775101.1 UniGene:Hs.272284
ProteinModelPortal:Q8IW52 SMR:Q8IW52 PhosphoSite:Q8IW52
DMDM:46396931 PaxDb:Q8IW52 PRIDE:Q8IW52 DNASU:139065
Ensembl:ENST00000338017 Ensembl:ENST00000356928
Ensembl:ENST00000381779 GeneID:139065 KEGG:hsa:139065
UCSC:uc004fbx.3 CTD:139065 GeneCards:GC0XM142715 HGNC:HGNC:23502
HPA:HPA001039 MIM:300562 neXtProt:NX_Q8IW52 PharmGKB:PA134926932
InParanoid:Q8IW52 OMA:TVFVAFC OrthoDB:EOG4VHK5S PhylomeDB:Q8IW52
GenomeRNAi:139065 NextBio:83882 Bgee:Q8IW52 CleanEx:HS_SLITRK4
Genevestigator:Q8IW52 GermOnline:ENSG00000179542 Uniprot:Q8IW52
Length = 837
Score = 155 (59.6 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 39/124 (31%), Positives = 68/124 (54%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N++ I+ F GL+AL+ L+L++N+L+ + +F+ + L L+ N+ + GA
Sbjct: 91 GNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGA 150
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELE 241
FN L +L L L ++ + DN FR + L L + NR+Q +P L + R+ EL+
Sbjct: 151 FNKLHKLKVLILNDNLISFLPDNIFR-FASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQ 209
Query: 242 IGQN 245
+ N
Sbjct: 210 LEDN 213
Score = 116 (45.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 42/162 (25%), Positives = 71/162 (43%)
Query: 108 QIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 167
+++ ++ +++ + G N I +D + F L +L+L NQ+ + F L L
Sbjct: 371 ELIPKPLNAKKLHVNG-NSIKDVDVSDFTDFEGLDLLHLGSNQITVIKGDVFHNLTNLRR 429
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N L F+GL L L L + IS F + L+ L L +N L+S+P
Sbjct: 430 LYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEISAGTFDSMPNLQLLYLNNNLLKSLP 489
Query: 228 TKQLSKLTRLEELEIGQNGFSMLE-AGCFKGLSYLKRLEITG 268
S L L + N F L +G L L ++++ G
Sbjct: 490 VYIFSGAP-LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEG 530
Score = 114 (45.2 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 47/208 (22%), Positives = 85/208 (40%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L+ + L + N F S SL L +N+LQ+I L+ L++L + N +L
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 252 AGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
A F G+ L+ L+ NL + + +GAF + + + + +
Sbjct: 124 ADTFLGIENLEYLQAD--YNLIKYIERGAF-NKLHKLKVLILNDNLISFLPDN-IFRFAS 179
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIA--ENPIECGCNIL----WLREMLVRRNTSA 364
L HL+++ N + R +++ +NP C C++L WL M
Sbjct: 180 LTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGE 239
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAG 392
C +P+ L + L + ++L G G
Sbjct: 240 AICETPSDLYGRLLKETNKQELCPMGTG 267
Score = 107 (42.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N+I+ I F LT LR LYL+ NQ+ + F L L L + N+ ++ G
Sbjct: 409 GSNQITVIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIKEISAGT 468
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ + L L L L ++ F G + L L L +N+ +P L +L L +++
Sbjct: 469 FDSMPNLQLLYLNNNLLKSLPVYIFSG-APLARLNLRNNKFMYLPVSGVLDQLQSLTQID 527
Query: 242 IGQN 245
+ N
Sbjct: 528 LEGN 531
Score = 104 (41.7 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 52/207 (25%), Positives = 77/207 (37%)
Query: 381 LSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 440
L+A+ L G + ++ + F GL L L N++ I LT L L + N
Sbjct: 377 LNAKKLHVNGNSIKDVDVSDFTDFEGLDLLHLGSNQITVIKGDVFHNLTNLRRLYLNGNQ 436
Query: 441 FSMLEAGCFKGLSYLKRLEITGASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDAL 499
L F GL L+ L + NL + + G F D +
Sbjct: 437 IERLYPEIFSGLHNLQYLYLE--YNLIKEISAGTF-DSMPNLQLLYLNNNLLKSLPVYIF 493
Query: 500 VGLPNLYHLNLKENAFTSFSESMLA--WPELRTIDIAENPIECGCNI----LWLREMLVR 553
G P L LNL+ N F S + L ID+ NP +C C++ LW+ ++
Sbjct: 494 SGAP-LARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWVEKLSDG 552
Query: 554 RNTSAVFCNSPAPLKYKSLISLSAEDL 580
+ C +P L SL E L
Sbjct: 553 IVVKELKCETPVQFANIELKSLKNEIL 579
Score = 100 (40.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 35/125 (28%), Positives = 52/125 (41%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L +N L + +F+ L +G N + GAF GL L L L L +
Sbjct: 64 LNFQNNFLNILYPNTFLNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILR 123
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F G+ L L N ++ I +KL +L+ L + N S L F+ S L
Sbjct: 124 ADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFAS-LTH 182
Query: 264 LEITG 268
L+I G
Sbjct: 183 LDIRG 187
Score = 97 (39.2 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 36/116 (31%), Positives = 48/116 (41%)
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
NQL+ P +F +L LN+ L F +L L L NI AF
Sbjct: 52 NQLKP-PWSNFYHLNFQNNF---LNI---LYPNTFLNFSHAVSLHLGNNKLQNIEGGAFL 104
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
GLS L+ L L +N L+ + + LE L+ N +E G F L LK L
Sbjct: 105 GLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVL 160
Score = 63 (27.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IGGFEPQEKLVELQLNHNKHFPQQ 108
L+L+ N I + I + SL H+D+ +P IG E ++VELQL N P
Sbjct: 160 LILNDNLISFLPDNIFRFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDN---PWN 216
Query: 109 IVCSII 114
C ++
Sbjct: 217 CSCDLL 222
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 219 (82.2 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 132/529 (24%), Positives = 219/529 (41%)
Query: 43 SNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN 102
+N S + + + K+ S+ L L+++D+SH ++++P GF +L L +N+N
Sbjct: 252 TNGSTESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNN 311
Query: 103 KHFPQQIVCSIISP-RRVEIFG--QNRISRIDQACF-EGLTALRILYLDDNQLRSVPTPS 158
I +S + ++I N+I + F E ++ +YL +N + SV P
Sbjct: 312 GI--SMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSI-SVLNPQ 368
Query: 159 -FIYLGMLAELRVGLNVFT-TLAD-GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRS 215
F L L L + +N T T D F GL RL L+L LT + F L L+
Sbjct: 369 LFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQI 428
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
L L N+L++I + + L L + N L+A GL L L + + L V
Sbjct: 429 LNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNA-LIGV 487
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-- 333
AF + AL + +L ++L EN T +S
Sbjct: 488 HPDAFRNCSALQDLNLNGNQLKTV--PLALRNMRHLRTVDLGENMITVMEDSAFKGLGNL 545
Query: 334 --LRTI-DIAEN-PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
LR I + EN + ++ L+ + + RN AV P + S S+ A L
Sbjct: 546 YGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVV--EPGAFEMTS--SIQAVRLD-- 599
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
G L +I+ F + L L ++DNRL+S + + L+ L++ +N S L + F
Sbjct: 600 GNELNDIN-GLFSNMPSLLWLNISDNRLESFDYGHVP--STLQWLDLHKNRLSSL-SNRF 655
Query: 450 KGLSYLKRLEITGAS--NLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
GL +L+ S L R+ + + ++ D + NL
Sbjct: 656 -GLDSELKLQTLDVSFNQLQRIGPSSIPNSIELLFLNDNLITT---VDPDTFMHKTNLTR 711
Query: 508 LNLKENAFTSFS-ESMLAWP--ELRTID---IAENPIECGCNILWLREM 550
++L N T+ +S+ P E R + I NP C CNI WL+++
Sbjct: 712 VDLYANQITTLDIKSLRILPVWEHRALPEFYIGGNPFTCDCNIDWLQKI 760
Score = 184 (69.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 99/465 (21%), Positives = 180/465 (38%)
Query: 83 IPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLT- 139
I F +L L L+ N P I C++ + + +NR+ +++ F +
Sbjct: 191 IEADAFSVTRRLERLDLSSNNIWSLPDNIFCTLSELSALNM-SENRLQDVNELGFRDRSQ 249
Query: 140 -----ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+ ++ +S + + L L L V N F L F L RL L +
Sbjct: 250 EPTNGSTESTSTTESAKKSSSSSTSCSLD-LEYLDVSHNDFVVLPANGFGTLRRLRVLSV 308
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL-EELEIGQNGFSMLEAG 253
G++ I+D A GL L+ L L+ N++ ++PT+ ++ ++ +E+ + N S+L
Sbjct: 309 NNNGISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQ 368
Query: 254 CFKGLSYLKRLEIT-GASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
F L L+ L+++ T + K F +E L L
Sbjct: 369 LFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTK-LEPEIFSDLYTLQ 427
Query: 313 HLNLKENAFTSFSESMLA-WPELRTIDIAENPIEC----GCNILWLREMLVRRNTSAVFC 367
LNL+ N + + A L T+ ++ N ++ N L++ +L N + +
Sbjct: 428 ILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGV 487
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
+ A +++ +L +DL G L + A R + LR++ L +N + +
Sbjct: 488 HPDA---FRNCSAL--QDLNLNGNQLKTVP-LALRNMRHLRTVDLGENMITVMEDSAFKG 541
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXX 487
L L L + N + F+ L L+ L + + + V GAF
Sbjct: 542 LGNLYGLRLIGNYLENITMHTFRDLPNLQILNLA-RNRIAVVEPGAFEMTSSIQAVRLDG 600
Query: 488 XXXXXIIEEDALVGLPNLYHLNLKENAFTSFS----ESMLAWPEL 528
I +P+L LN+ +N SF S L W +L
Sbjct: 601 NELNDI--NGLFSNMPSLLWLNISDNRLESFDYGHVPSTLQWLDL 643
Score = 134 (52.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 94/421 (22%), Positives = 158/421 (37%)
Query: 136 EGLTALRILYLDDNQLRS-VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
E AL IL D+ +S + SF +L L +L + L +GL +L L L
Sbjct: 118 EHTIALHILCNDEIMAKSRLEAQSFAHLVRLQQLSIQYCKLGRLGRQVLDGLEQLRNLTL 177
Query: 195 RGAGLT------NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 248
R + I +AF L L L+ N + S+P L+ L L + +N
Sbjct: 178 RTHNILWPALNFEIEADAFSVTRRLERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQ 237
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXX---IEEGAL 305
+ F+ S T +++ T K + + +
Sbjct: 238 DVNELGFRDRSQEPTNGSTESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGF 297
Query: 306 VGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILW------LREMLV 358
L L L++ N + ++ L+ L+ ++++ N I L+ ++E+ +
Sbjct: 298 GTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYL 357
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
+ N+ +V N P + +L L A DL T I N F GL L L L+ N+L
Sbjct: 358 QNNSISVL-N---PQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLT 413
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 478
+ + S L L+ L + N + A F ++ L L + + L + A+A
Sbjct: 414 KLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTL-LLSHNKLKYL--DAYALNG 470
Query: 479 XXXXXXXXXXXXXXI-IEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENP 537
I + DA L LNL N + ++ LRT+D+ EN
Sbjct: 471 LYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALRNMRHLRTVDLGENM 530
Query: 538 I 538
I
Sbjct: 531 I 531
Score = 43 (20.2 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 16/45 (35%), Positives = 18/45 (40%)
Query: 502 LPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNIL 545
L L L L N F L A P L I +A+N C C L
Sbjct: 954 LRKLEVLRLDGNRLMHFEVWQLSANPYLVEISLADNQWSCECGYL 998
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 208 (78.3 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 76/244 (31%), Positives = 116/244 (47%)
Query: 12 KCMNPYEPSRFSTRDPSCNLQEANLDVIPS----HSNPSIQRLVLSTNRIKTVD----SA 63
K +N P S+ NLQE ++ VI S H N ++ L LS N+I+ ++ +
Sbjct: 76 KSLNEV-PQSISSNTRYLNLQENSIQVIRSDTFKHLN-HLEILQLSKNQIRQIEVGAFNG 133
Query: 64 IPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEI 121
+P ++L+ D ++P FE KL EL L +N + P + S RR+++
Sbjct: 134 LPNLITLELFD---NRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDL 190
Query: 122 FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 181
++S I +A FEGL LR L L L+ VP + L L EL + N + G
Sbjct: 191 GELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVP--NLTPLVRLEELELSGNQLGVVRPG 248
Query: 182 AFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 241
+F GL L L L + ++ I NAF L L L L+ N L S+P + L +LE +
Sbjct: 249 SFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVH 308
Query: 242 IGQN 245
+ N
Sbjct: 309 LNHN 312
Score = 203 (76.5 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 61/160 (38%), Positives = 87/160 (54%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I +I+ F GL L L L DN+L VP+ +F YL L EL + N TL AF
Sbjct: 120 KNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAF 179
Query: 184 NGLGRLSALDLRGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 242
+ + L LDL L+ IS+ AF GL LR L L L+ +P L+ L RLEELE+
Sbjct: 180 HRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVPN--LTPLVRLEELEL 237
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
N ++ G F+GL L++L + S ++ + + AF D
Sbjct: 238 SGNQLGVVRPGSFQGLVSLRKLWLMH-SRISVIERNAFDD 276
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
R L L +N ++ + + +F +L L L++ N + GAFNGL L L+L L
Sbjct: 90 RYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPL 149
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAGCFKGLSY 260
+ AF LS LR L L +N ++++P ++ L L++G+ S + F+GL
Sbjct: 150 VPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLN 209
Query: 261 LKRLEI 266
L+ L +
Sbjct: 210 LRFLNL 215
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 69/281 (24%), Positives = 112/281 (39%)
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPI---ECGCNILWLREMLVRRNTSAV 365
N +LNL+EN+ S++ L + +++N I E G L ++ T +
Sbjct: 88 NTRYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGA-FNGLPNLI----TLEL 142
Query: 366 FCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNR-LQSIPTK 423
F N + ++ LS +L + + AF + LR L L + R L I
Sbjct: 143 FDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFISEA 202
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
L L L +G G + L L+ LE++G + L VR G+F
Sbjct: 203 AFEGLLNLRFLNLGMCGLK--DVPNLTPLVRLEELELSG-NQLGVVRPGSF-QGLVSLRK 258
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGC 542
+IE +A L NL LNL N+ S + +L + + NP C C
Sbjct: 259 LWLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNC 318
Query: 543 NILWL----REMLVRRNTSAVFCNSPAPLKYKSLISLSAED 579
++LWL +E + +T C++P K + + L D
Sbjct: 319 DVLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLDQRD 359
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 56/246 (22%), Positives = 99/246 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
++ T L +P + +S TR L + +N ++ + FK L++L+ L+++ + + ++
Sbjct: 71 VICTKKSLNEVP-QSISSNTRY--LNLQENSIQVIRSDTFKHLNHLEILQLS-KNQIRQI 126
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + + A L L L L+ N + + + P L
Sbjct: 127 EVGAF-NGLPNLITLELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSL 185
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
R +D+ E + +L R + C L+ L E+L +G L
Sbjct: 186 RRLDLGELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVPNLTPLVRL--EELELSGNQLG 243
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
+ +F+GL LR L L +R+ I L LEEL + N L F L
Sbjct: 244 VVRPGSFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQ 303
Query: 455 LKRLEI 460
L+R+ +
Sbjct: 304 LERVHL 309
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 63/232 (27%), Positives = 93/232 (40%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S R L L +N +Q I + L LE L++ +N +E G F GL L LE+ +
Sbjct: 87 SNTRYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLITLELFD-N 145
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
L V AF + + A +P+L L+L E SF S A
Sbjct: 146 RLPLVPSQAF-EYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFI-SEAA 203
Query: 331 WPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPA---PLKYKSLISLSAEDLG 387
+ L + N CG + LVR + N P ++ L+SL L
Sbjct: 204 FEGLLNLRFL-NLGMCGLKDVPNLTPLVRLEELELSGNQLGVVRPGSFQGLVSL--RKLW 260
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ ++ I NAF L L L L+ N L S+P + L +LE + + N
Sbjct: 261 LMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHN 312
Score = 122 (48.0 bits), Expect = 0.00058, P = 0.00058
Identities = 33/108 (30%), Positives = 49/108 (45%)
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N + F L L L L + I AF GL L +L L DNRL +P++
Sbjct: 97 NSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAFE 156
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
L++L EL + N L A F + L+RL++ L+ + + AF
Sbjct: 157 YLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFISEAAF 204
>UNIPROTKB|E2RGP5 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:22865 OMA:IAPYQTR
EMBL:AAEX03017345 RefSeq:XP_851171.1 Ensembl:ENSCAFT00000022943
GeneID:608925 KEGG:cfa:608925 NextBio:20894548 Uniprot:E2RGP5
Length = 979
Score = 144 (55.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 40/125 (32%), Positives = 58/125 (46%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N +R + T SF++L + +G N + GAFNGL L L L L
Sbjct: 82 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQSGAFNGLKILKRLYLHENKLDIFR 141
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N ++ I + L++L L + N ML FK +S L
Sbjct: 142 NDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVS-LTH 200
Query: 264 LEITG 268
L++ G
Sbjct: 201 LDLRG 205
Score = 144 (55.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 60/212 (28%), Positives = 94/212 (44%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N + I F GL L+ LYL +N+L +F+ L L L+ NV + GA
Sbjct: 109 GNNALQDIQSGAFNGLKILKRLYLHENKLDIFRNDTFLGLESLEYLQADYNVIKRIESGA 168
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK-QLSKLTR-LEEL 240
F L +L L L + + N F+ +S L L L NRL+ + + L + R L EL
Sbjct: 169 FRNLSKLRVLILNDNLIPMLPTNLFKAVS-LTHLDLRGNRLKVLFYRGMLDHIGRSLMEL 227
Query: 241 EIGQNGFSML-EAGCFKGLSYLKRLEITG-ASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
++ +N ++ E K S+L+R+ T ++T F
Sbjct: 228 QLEENPWNCTCEIVQLK--SWLERIPYTALVGDITCETPFHFHGKDLREIRKTELCPLLS 285
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
E A +G+P+L + KENA+ + SML+
Sbjct: 286 DSEVEASLGIPHLS--SSKENAWPTKPSSMLS 315
Score = 123 (48.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I +I ++ F ++L +L+L +N++ V +FI L L L + N L G F
Sbjct: 418 NLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFR 477
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L + I AF + L+ L L +N L+++PT + T L L + +
Sbjct: 478 GLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAG-TSLARLNLRK 536
Query: 245 NGFSMLE-AGCFKGLSYLKRLEI 266
N F L AG + L+ + ++++
Sbjct: 537 NYFLYLPVAGVLEHLNAIVQIDL 559
Score = 122 (48.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 37/123 (30%), Positives = 53/123 (43%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N ++ + F L L +G N + + DGAF L L +L L G + ++
Sbjct: 413 LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLT 472
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
FRGL L L N ++ I S + L+ L + N L F G S L R
Sbjct: 473 PGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTS-LAR 531
Query: 264 LEI 266
L +
Sbjct: 532 LNL 534
Score = 117 (46.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 58/245 (23%), Positives = 99/245 (40%)
Query: 343 PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
P C CN L + ++ + N N+ + L + L +A+ L + + I + F
Sbjct: 374 PTGCTCN-LHINDLGLTVNCKERGFNNISELLPRPL---NAKKLYLSSNLIQKIYRSDFW 429
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
S L L L +NR+ + L L+ L + N L G F+GL L L
Sbjct: 430 NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFE- 488
Query: 463 ASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSES 521
N+ R ++ AF+ + DA G +L LNL++N F +
Sbjct: 489 -FNVIREIQPAAFS-LMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVA 545
Query: 522 MLA--WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISL 575
+ + ID+ ENP +C C+++ W+ + V C SP L ++ + ++
Sbjct: 546 GVLEHLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHRDVRTI 605
Query: 576 SAEDL 580
E L
Sbjct: 606 ELEVL 610
Score = 53 (23.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ--EKLVELQLNHNKHFPQ 107
L+L+ N I + + + +SL H+DL ++ G L+ELQL N P
Sbjct: 178 LILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVLFYRGMLDHIGRSLMELQLEEN---PW 234
Query: 108 QIVCSII 114
C I+
Sbjct: 235 NCTCEIV 241
>UNIPROTKB|B3KTY4 [details] [associations]
symbol:SLITRK2 "cDNA FLJ38959 fis, clone NT2RI2000167,
highly similar to SLIT and NTRK-like protein 2" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL109653 IPI:IPI00410358
RefSeq:NP_001137478.1 RefSeq:NP_001137480.1 RefSeq:NP_001137481.1
RefSeq:NP_001137482.1 RefSeq:NP_115928.1 UniGene:Hs.320368
GeneID:84631 KEGG:hsa:84631 CTD:84631 HGNC:HGNC:13449
PharmGKB:PA134968225 ChiTaRS:SLITRK2 GenomeRNAi:84631 NextBio:74551
OrthoDB:EOG4GTKC9 EMBL:AK096278 EMBL:CH471175 SMR:B3KTY4
STRING:B3KTY4 Ensembl:ENST00000335565 Uniprot:B3KTY4
Length = 724
Score = 140 (54.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 90 PQEKLVELQLNHN---KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
PQ ++ +L LN N + +P + V + + + + G N + I F GL L+ L+L
Sbjct: 60 PQYRIYQLFLNGNLLTRLYPNEFV-NYSNAVTLHL-GNNGLQEIRTGAFSGLKTLKRLHL 117
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
++N+L + +F+ L L L+ N + + GAF+ L +L L L L ++ N
Sbjct: 118 NNNKLEILREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNV 177
Query: 207 FRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQN 245
FR + L L L NRL+ +P L + + E+++ +N
Sbjct: 178 FRFVL-LTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 135 (52.6 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 60/227 (26%), Positives = 96/227 (42%)
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
R+ L L G LT + N F S +L L +N LQ I T S L L+ L + N
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKL 122
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
+L F GL L+ L+ + ++ + GAF+ + + L+
Sbjct: 123 EILREDTFLGLESLEYLQ-ADYNYISAIEAGAFSKLNKLKVLI---------LNDNLLLS 172
Query: 308 LPN-------LYHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML- 357
LP+ L HL+L+ N F+ + + I + ENP C C++L L+ L
Sbjct: 173 LPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLD 232
Query: 358 -VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRG 403
+ + C +P L K + L+ +DL C + SD++ RG
Sbjct: 233 TITVFVGEIVCETPFRLHGKDVTQLTRQDL-CPRK---SASDSSQRG 275
Score = 129 (50.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI+ I + F LT+LR LYL+ N L + F L L L + NV +
Sbjct: 407 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLT 466
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ L L L L L ++ DN F G + L L L +N +P K L +L +++
Sbjct: 467 FDALINLQLLFLNNNLLRSLPDNIFGG-TALTRLNLRNNHFSHLPVKGVLDQLPAFIQID 525
Query: 242 IGQN 245
+ +N
Sbjct: 526 LQEN 529
Score = 129 (50.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 52/199 (26%), Positives = 85/199 (42%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
LT + N F S +L L +N LQ I T S L L+ L + N +L F GL
Sbjct: 74 LTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGL 133
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN-------L 505
L+ L+ + ++ + GAF+ I+ ++ L+ LP+ L
Sbjct: 134 ESLEYLQ-ADYNYISAIEAGAFSKLNKLKVL---------ILNDNLLLSLPSNVFRFVLL 183
Query: 506 YHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML--VRRNTSAVFC 561
HL+L+ N F+ + + I + ENP C C++L L+ L + + C
Sbjct: 184 THLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVC 243
Query: 562 NSPAPLKYKSLISLSAEDL 580
+P L K + L+ +DL
Sbjct: 244 ETPFRLHGKDVTQLTRQDL 262
Score = 122 (48.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 56/213 (26%), Positives = 84/213 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L G L + N S L L L +NR+ I + LT L L + N +L
Sbjct: 380 LYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLY 439
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L + N+ + K D + + G L
Sbjct: 440 PSMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTA-L 496
Query: 312 YHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--- 366
LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 497 TRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEV 556
Query: 367 -CNSPAPLKYKSLISLSAEDLGCAGAGLTNISD 398
C SPA + L L E + C + N+SD
Sbjct: 557 TCESPAKHAGEILKFLGREAI-CPDS--PNLSD 586
Score = 118 (46.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 50/190 (26%), Positives = 75/190 (39%)
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
S + L G L + N S L L L +NR+ I + LT L L + N
Sbjct: 376 SPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYL 435
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVG 501
+L F GL L+ L + N+ + K D + D + G
Sbjct: 436 EVLYPSMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLP-DNIFG 492
Query: 502 LPNLYHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 559
L LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 493 GTALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVI 552
Query: 560 F----CNSPA 565
C SPA
Sbjct: 553 INEVTCESPA 562
Score = 112 (44.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 44/181 (24%), Positives = 74/181 (40%)
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
++V + S V P+ S S + ++ C TNISD + S + L LT N
Sbjct: 327 IMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSP-KKLYLTGN 385
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
LQ++ L + + L+ L +G N ++++ G F L+ L+RL + G N V +
Sbjct: 386 YLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNG--NYLEVLYPSMF 443
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 535
D I+ L NL L L N S +++ L +++
Sbjct: 444 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRN 503
Query: 536 N 536
N
Sbjct: 504 N 504
Score = 112 (44.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L+L+ N L + F+ L +G N + GAF+GL L L L L +
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILR 126
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N + +I SKL +L+ L + N L + F+ + L
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTH 185
Query: 264 LEITG 268
L++ G
Sbjct: 186 LDLRG 190
Score = 107 (42.7 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 139 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198
T+ + LYL N L++V + L L +G N + +GAF L L L L G
Sbjct: 375 TSPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNY 434
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
L + + F GL L+ L L N ++ I L L+ L + N L F G
Sbjct: 435 LEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT 494
Query: 259 SYLKRLEI 266
+ L RL +
Sbjct: 495 A-LTRLNL 501
Score = 104 (41.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 37/143 (25%), Positives = 60/143 (41%)
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
TNISD + S + L LT N LQ++ L + + L+ L +G N ++++ G F L+
Sbjct: 365 TNISDLQPKPTSP-KKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLT 423
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L+RL + G N V + D I+ L NL L L N
Sbjct: 424 SLRRLYLNG--NYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNN 481
Query: 320 AFTSFSESMLAWPELRTIDIAEN 342
S +++ L +++ N
Sbjct: 482 LLRSLPDNIFGGTALTRLNLRNN 504
Score = 79 (32.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 83 IPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
I G F + L L LN+NK + + S ++ N IS I+ F L
Sbjct: 101 IRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQA-DYNYISAIEAGAFSKLNK 159
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA-DGAFNGLGRLSALDL 194
L++L L+DN L S+P+ F ++ +L L + N + G +G + + L
Sbjct: 160 LKVLILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQL 213
Score = 63 (27.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG-FEPQEKLVELQLNHNKHFPQQ 108
L+L+ N + ++ S + ++ L H+DL ++P G E ++E+QL N P
Sbjct: 163 LILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN---PWN 219
Query: 109 IVCSII 114
C ++
Sbjct: 220 CTCDLL 225
Score = 49 (22.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN 102
+++RL L+ N+++ + + L SL+++ + I G F KL L LN N
Sbjct: 111 TLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDN 168
>UNIPROTKB|E1C5R1 [details] [associations]
symbol:LOC428618 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005614
"interstitial matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0000122 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030512 GO:GO:0005614
GeneTree:ENSGT00700000104286 OMA:RRLYISH EMBL:AADN02001982
IPI:IPI00573069 RefSeq:XP_426175.3 ProteinModelPortal:E1C5R1
Ensembl:ENSGALT00000024034 GeneID:428618 KEGG:gga:428618
Uniprot:E1C5R1
Length = 512
Score = 205 (77.2 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 104/413 (25%), Positives = 172/413 (41%)
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 242
F + L L L +G +I +N F+ LS L+SL L N+L+ IP + + LE L++
Sbjct: 67 FRRMSALEELVLSCSGTESIENNTFKALSSLKSLELYKNQLKQIP---IFLPSGLEILKL 123
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
N + L A F+GL L+ L+I + + + AF+
Sbjct: 124 ADNSINTLHATDFEGLVKLRVLDIRN-NLIATLPSSAFSSLCNLQSLILDGNNMEFV--- 179
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAEN-----PIECGCNILWLREM 356
A + LP L +L++ +N S S A + L+ + ++ N P++ ++L L+
Sbjct: 180 SAPLKLPRLKYLSMADNRLNSLPASFFASFGNLQFLSLSGNFLTKVPLDLPKSLLSLK-- 237
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA-GA----GLTNI--SDNAFRGLS---- 405
L + V L+ S LS L GA LT + S N + L
Sbjct: 238 LDKNQLKTVQLQDMKHLENLSEFFLSENQLTSVDGAHLLPNLTTLELSKNQLQALPLRLP 297
Query: 406 G-LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 464
G L+ L ++N +Q + ++ L L+ L + N SM EAG + + L L +
Sbjct: 298 GRLQKLDCSNNLIQRVTAQEFQGLQDLKHLFLDNNAVSMFEAGALQHCAQLSNLALE--Q 355
Query: 465 NLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA 524
NL D + E L L L LNL+ N ++ +L
Sbjct: 356 NLLISIPLRLPDTLARLDLKGNDIED---VGEQELKDLKQLQVLNLRNNKISALDRKVLE 412
Query: 525 W-PELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--CNSPAPLKYKSLIS 574
+ P LR + + NP C C++L R +L+ + T C +PA + +S +S
Sbjct: 413 YLPRLRHLYLDGNPWNCTCDLLRTRGVLMAKGTDVRGGQCAAPAESRGESWMS 465
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 80/303 (26%), Positives = 132/303 (43%)
Query: 130 IDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 189
I+ F+ L++L+ L L NQL+ +P F+ G L L++ N TL F GL +L
Sbjct: 86 IENNTFKALSSLKSLELYKNQLKQIPI--FLPSG-LEILKLADNSINTLHATDFEGLVKL 142
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 249
LD+R + + +AF L L+SL+L N ++ + KL RL+ L + N +
Sbjct: 143 RVLDIRNNLIATLPSSAFSSLCNLQSLILDGNNMEFVSAPL--KLPRLKYLSMADNRLNS 200
Query: 250 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP 309
L A F L+ L ++G + LT+V D ++ + L
Sbjct: 201 LPASFFASFGNLQFLSLSG-NFLTKVP----LDLPKSLLSLKLDKNQLKTVQLQDMKHLE 255
Query: 310 NLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNS 369
NL L EN TS + L P L T+++++N ++ L L L + + S
Sbjct: 256 NLSEFFLSENQLTSVDGAHLL-PNLTTLELSKNQLQA--LPLRLPGRLQKLDCSNNLIQR 312
Query: 370 PAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 429
+++ L L + L ++ A + + L +L L N L SIP + L
Sbjct: 313 VTAQEFQGLQDL--KHLFLDNNAVSMFEAGALQHCAQLSNLALEQNLLISIPLRLPDTLA 370
Query: 430 RLE 432
RL+
Sbjct: 371 RLD 373
Score = 158 (60.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 81/335 (24%), Positives = 140/335 (41%)
Query: 50 LVLSTNRIKTV-DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQ 108
L + N I T+ SA +LQ + L + P+ K + + N P
Sbjct: 145 LDIRNNLIATLPSSAFSSLCNLQSLILDGNNMEFVSAPLKLPRLKYLSMADNRLNSLPAS 204
Query: 109 IVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 168
S + + + + G N ++++ + L +L+ LD NQL++V +L L+E
Sbjct: 205 FFASFGNLQFLSLSG-NFLTKVPLDLPKSLLSLK---LDKNQLKTVQLQDMKHLENLSEF 260
Query: 169 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 228
+ N T++ DGA + L L+ L+L L + R L+ L ++N +Q +
Sbjct: 261 FLSENQLTSV-DGA-HLLPNLTTLELSKNQLQALP---LRLPGRLQKLDCSNNLIQRVTA 315
Query: 229 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 288
++ L L+ L + N SM EAG + + L L + NL D
Sbjct: 316 QEFQGLQDLKHLFLDNNAVSMFEAGALQHCAQLSNLALE--QNLLISIPLRLPDTLARLD 373
Query: 289 XXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECG 347
+ E L L L LNL+ N ++ +L + P LR + + NP C
Sbjct: 374 LKGNDIED---VGEQELKDLKQLQVLNLRNNKISALDRKVLEYLPRLRHLYLDGNPWNCT 430
Query: 348 CNILWLREMLVRRNTSAVF--CNSPAPLKYKSLIS 380
C++L R +L+ + T C +PA + +S +S
Sbjct: 431 CDLLRTRGVLMAKGTDVRGGQCAAPAESRGESWMS 465
Score = 128 (50.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 52/213 (24%), Positives = 92/213 (43%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKL 94
L +P S+ L L N++KTV +L +L LS + P
Sbjct: 222 LTKVPLDLPKSLLSLKLDKNQLKTVQLQDMKHLENLSEFFLSENQLTSVDGAHLLPNLTT 281
Query: 95 VELQLNHNKHFPQQIVCSIISPRRVEIF--GQNRISRIDQACFEGLTALRILYLDDNQLR 152
+EL N + P ++ P R++ N I R+ F+GL L+ L+LD+N +
Sbjct: 282 LELSKNQLQALPLRL------PGRLQKLDCSNNLIQRVTAQEFQGLQDLKHLFLDNNAVS 335
Query: 153 SVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG 212
+ + L+ L + N+ ++ + L RL DL+G + ++ + + L
Sbjct: 336 MFEAGALQHCAQLSNLALEQNLLISIPLRLPDTLARL---DLKGNDIEDVGEQELKDLKQ 392
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
L+ L L +N++ ++ K L L RL L + N
Sbjct: 393 LQVLNLRNNKISALDRKVLEYLPRLRHLYLDGN 425
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 69/260 (26%), Positives = 115/260 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSH 77
P R S DP+ ++Q IP + +RL +S ++IK + +S L+ + LS
Sbjct: 22 PRRCSC-DPAQSVQCYRASEIPREIPFTTRRLYISHSKIKQLQITDFRRMSALEELVLSC 80
Query: 78 TTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIF--GQNRISRIDQACF 135
+ I F+ L L+L N+ +QI I P +EI N I+ + F
Sbjct: 81 SGTESIENNTFKALSSLKSLELYKNQL--KQI--PIFLPSGLEILKLADNSINTLHATDF 136
Query: 136 EGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
EGL LR+L + +N + ++P+ +F L L L + N ++ A L RL L +
Sbjct: 137 EGLVKLRVLDIRNNLIATLPSSAFSSLCNLQSLILDGNNMEFVS--APLKLPRLKYLSMA 194
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
L ++ + F L+ L L+ N L +P L K L L++ +N ++
Sbjct: 195 DNRLNSLPASFFASFGNLQFLSLSGNFLTKVPL-DLPK--SLLSLKLDKNQLKTVQLQDM 251
Query: 256 KGLSYLKRLEITGASNLTRV 275
K L L ++ + LT V
Sbjct: 252 KHLENLSEFFLS-ENQLTSV 270
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 203 (76.5 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 71/223 (31%), Positives = 100/223 (44%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAI--PIYLSLQHVDLSHTTWLIIP 84
P+ + Q N +P PS QRL L N I+++ P L+L + +T I P
Sbjct: 42 PTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRSLRPGTFGPNLLTLWLFSNNLST--IHP 99
Query: 85 IGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR--ISRIDQACFEGLTALR 142
G F + L EL L N+H + R++ R +S + F GL +L+
Sbjct: 100 -GTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQ 158
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
LYL +N L + F L L+ L + N L + F GLG L L L G L +
Sbjct: 159 YLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGV 218
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
AF GLS L L L +N L S+P + L+ L LE L + N
Sbjct: 219 HRAAFHGLSRLTILYLFNNSLASLPGEALADLPALEFLRLNAN 261
Score = 176 (67.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 69/263 (26%), Positives = 106/263 (40%)
Query: 114 ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
+ P +F QN + R + G L L+L N L ++ +F +L L EL +G N
Sbjct: 58 LPPSTQRLFLQNNLIRSLRPGTFGPNLLT-LWLFSNNLSTIHPGTFRHLQALEELDLGDN 116
Query: 174 V-FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
+L F GL RL +L L L+++ N FRGL L+ L L +N L + +
Sbjct: 117 RHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFA 176
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
L L L + N +L F+GL L RL + G + L V + AF
Sbjct: 177 DLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHG-NRLQGVHRAAFHGLSRLTILYLF 235
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILW 352
E AL LP L L L N + + W + ++ + + C
Sbjct: 236 NNSLASLPGE-ALADLPALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPER 294
Query: 353 L-REMLVRRNTSAVFCNSPAPLK 374
R++ R++ C P P +
Sbjct: 295 QGRDLRALRDSDFQACPPPTPTR 317
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 73/273 (26%), Positives = 109/273 (39%)
Query: 144 LYLDDNQLRSVPTPSFIYLGM-LAELRVGLNVFTTLADGAFNGLGRLSALDLR-GAGLTN 201
L+L +N +RS+ +F G L L + N +T+ G F L L LDL L +
Sbjct: 65 LFLQNNLIRSLRPGTF---GPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRS 121
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
+ + F+GL L+SL L +L S+P L L+ L + +N L+ F L+ L
Sbjct: 122 LEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANL 181
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
L + G + L + + F + A GL L L L N+
Sbjct: 182 SHLFLHG-NRLRLLTEHVFRGLGSLDRLLLHGNRLQG-VHRAAFHGLSRLTILYLFNNSL 239
Query: 322 TSF-SESMLAWPELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYKSL 378
S E++ P L + + NP C C LW R ++S V C +P + + L
Sbjct: 240 ASLPGEALADLPALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDL 299
Query: 379 ISLSAEDL-GCAGAGLTNISDNAFRGLSGLRSL 410
+L D C T A RG S L
Sbjct: 300 RALRDSDFQACPPPTPTRPGSRA-RGNSSSNHL 331
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 61/236 (25%), Positives = 94/236 (39%)
Query: 347 GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
G N+L L L N S + P ++ L +L DLG L ++ + F+GL
Sbjct: 81 GPNLLTL--WLFSNNLSTIH-----PGTFRHLQALEELDLG-DNRHLRSLEPDTFQGLER 132
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 466
L+SL L +L S+P L L+ L + +N L+ F L+ L L + G + L
Sbjct: 133 LQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHG-NRL 191
Query: 467 TRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAW 525
+ + F + A GL L L L N+ S E++
Sbjct: 192 RLLTEHVFRGLGSLDRLLLHGNRLQGV-HRAAFHGLSRLTILYLFNNSLASLPGEALADL 250
Query: 526 PELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 579
P L + + NP C C LW R ++S V C +P + + L +L D
Sbjct: 251 PALEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDLRALRDSD 306
Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
Identities = 43/177 (24%), Positives = 69/177 (38%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
L+++ N FRGL L+ L L +N L + + L L L + N +L F+GL
Sbjct: 143 LSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGL 202
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKE 512
L RL + G + L V + AF + E AL LP L L L
Sbjct: 203 GSLDRLLLHG-NRLQGVHRAAFHGLSRLTILYLFNNSLASLPGE-ALADLPALEFLRLNA 260
Query: 513 NAFTSFSESMLAWPELRTIDIAENPIECGCNILWL-REMLVRRNTSAVFCNSPAPLK 568
N + + W + ++ + + C R++ R++ C P P +
Sbjct: 261 NPWACDCRARPLWAWFQRARVSSSDVTCATPPERQGRDLRALRDSDFQACPPPTPTR 317
>UNIPROTKB|G3X6G8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 OMA:AYGKAPS EMBL:DAAA02043707
EMBL:DAAA02043700 EMBL:DAAA02043701 EMBL:DAAA02043702
EMBL:DAAA02043703 EMBL:DAAA02043704 EMBL:DAAA02043705
EMBL:DAAA02043706 Ensembl:ENSBTAT00000006288 Uniprot:G3X6G8
Length = 943
Score = 209 (78.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 102/399 (25%), Positives = 158/399 (39%)
Query: 73 VDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
VD S +P G +P ++L +N + + + + G NR++ I
Sbjct: 47 VDCSERGLSTVP-AGLDPLTAYLDLSMNSLTELWPGVFHHLRFLEELRLSG-NRLAHIPG 104
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
F GL++L+IL L +N+L +P + L L LR+ N+ + + D +F GL L L
Sbjct: 105 QAFSGLSSLKILMLQNNRLGGIPAEALWELPGLQSLRLDANLISLVPDRSFEGLTSLRHL 164
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 252
L LT I A L L+++ L NR+ +P L+ L L + N L A
Sbjct: 165 WLDDNALTEIPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGA 224
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAFA-DXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+GL L+ L++ N ++ + A I E A +G P L
Sbjct: 225 HSFEGLQNLETLDL----NCNQLHEFPVAIQTLGRLQELGFHNNNIRAIPEKAFLGNPLL 280
Query: 312 YHLNLKENAFTSFSESMLAW-PELRTI------DIAENPIECGCNILWLREMLVRRNTSA 364
++ +N S P L T+ DI E P G L E L T A
Sbjct: 281 QTIHFYDNPIQFVGRSAFQHLPGLHTLSLNGATDIQEFPDLRGTTSL---ESLTL--TRA 335
Query: 365 VFCNSPAPLKYKSLISLSAEDLGC-AGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
P P + L L +L GL ++ RG L + L NR+ +
Sbjct: 336 GLQRLP-PGMCQQLPRLRVLELSHNLIEGLPSL-----RGCQKLEEIGLQHNRIWEVRAD 389
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
+LT L L++ N + F L L +L++TG
Sbjct: 390 TFRELTFLRSLDLSWNAIRSIHPEAFSTLRSLVKLDLTG 428
Score = 197 (74.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 103/416 (24%), Positives = 170/416 (40%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N ++ + F L L L L N+L +P +F L L L + N + A
Sbjct: 73 NSLTELWPGVFHHLRFLEELRLSGNRLAHIPGQAFSGLSSLKILMLQNNRLGGIPAEALW 132
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L +L L ++ + D +F GL+ LR L L DN L IP + LS L L+ + +
Sbjct: 133 ELPGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNALTEIPVRALSHLRALQAVTLAL 192
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK-GAFADXXXXXXXXXXXXXXXXXIEEG 303
N + F LS L L + R+R GA +
Sbjct: 193 NRIGRVPDYAFWNLSSLVVLHLHN----NRIRHLGAHSFEGLQNLETLDLNCNQLHEFPV 248
Query: 304 ALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRN 361
A+ L L L N + E + L P L+TI +NPI+ G + + L +
Sbjct: 249 AIQTLGRLQELGFHNNNIRAIPEKAFLGNPLLQTIHFYDNPIQFVGRSAF---QHLPGLH 305
Query: 362 TSAVFCNSPAPLK-YKSLI-SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 419
T ++ N ++ + L + S E L AGL + + L LR L L+ N ++
Sbjct: 306 TLSL--NGATDIQEFPDLRGTTSLESLTLTRAGLQRLPPGMCQQLPRLRVLELSHNLIEG 363
Query: 420 IPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 479
+P+ L +LEE+ + N + A F+ L++L+ L+++ + + + AF+
Sbjct: 364 LPS--LRGCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDLSWNA-IRSIHPEAFSTLRS 420
Query: 480 XXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPEL--RTIDI 533
+ L GL L HL L+ N S + ++P L RT+++
Sbjct: 421 LVKLDLTGNQLSVL----PLAGLGGLVHLKLRGNRALSQAFPKDSFPRLSPRTLEV 472
Score = 187 (70.9 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 107/404 (26%), Positives = 165/404 (40%)
Query: 62 SAIPIYLS--LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPR 117
S +P L ++DLS + + G F L EL+L+ N+ H P Q S +S
Sbjct: 55 STVPAGLDPLTAYLDLSMNSLTELWPGVFHHLRFLEELRLSGNRLAHIPGQAF-SGLSSL 113
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
++ + NR+ I L L+ L LD N + VP SF L L L + N T
Sbjct: 114 KILMLQNNRLGGIPAEALWELPGLQSLRLDANLISLVPDRSFEGLTSLRHLWLDDNALTE 173
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 237
+ A + L L A+ L + + D AF LS L L L +NR++ + L L
Sbjct: 174 IPVRALSHLRALQAVTLALNRIGRVPDYAFWNLSSLVVLHLHNNRIRHLGAHSFEGLQNL 233
Query: 238 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 297
E L++ N + L L+ L +N+ + + AF
Sbjct: 234 ETLDLNCNQLHEFPVA-IQTLGRLQELGFHN-NNIRAIPEKAFLGNPLLQTIHFYDNPIQ 291
Query: 298 XXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELR-TIDIAENPI-ECGCNIL--WL 353
+ A LP L+ L+L N T E +P+LR T + + G L +
Sbjct: 292 F-VGRSAFQHLPGLHTLSL--NGATDIQE----FPDLRGTTSLESLTLTRAGLQRLPPGM 344
Query: 354 REMLVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVL 412
+ L R + N L SL E++G + + + FR L+ LRSL L
Sbjct: 345 CQQLPRLRVLELSHNLIEGLP--SLRGCQKLEEIGLQHNRIWEVRADTFRELTFLRSLDL 402
Query: 413 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
+ N ++SI + S L L +L++ N S+L GL +LK
Sbjct: 403 SWNAIRSIHPEAFSTLRSLVKLDLTGNQLSVLPLAGLGGLVHLK 446
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 206 (77.6 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 95/357 (26%), Positives = 154/357 (43%)
Query: 29 CNLQEAN-------LDVIPSHSNPSIQRLV-LSTNRIKTVD-SAIPIYLSLQHVDLSHTT 79
CN+QE + L +P PS RL+ LS NRIKT++ + L+ ++L+ T
Sbjct: 45 CNVQERSVLCHRKKLMSVPE-GIPSETRLLDLSKNRIKTINPDEFSAFPQLEELELNENT 103
Query: 80 WLIIPIGGFEPQEKLVELQLNHNKHFPQQ--IVCSIISPRRVEIFGQNRISRIDQACFEG 137
I G F L L L NK Q + + + +++I +N+I + F+
Sbjct: 104 ISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDI-SENKIVILLDYMFQD 162
Query: 138 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGA 197
L LR L + DN L + +F L L +L + T++ AF L L L LR
Sbjct: 163 LYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNL 222
Query: 198 GLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 256
+ +I D +F+ L L+ L + + L ++ T L L L L I + + +
Sbjct: 223 NINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLN-LTSLTITNANLTSIPYLALR 281
Query: 257 GLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNL 316
L YL+ L ++ N ++ +G IE + GL L LN+
Sbjct: 282 HLVYLRFLNMS--YNPIQMIEGNRLHDLLRLQELYLVGGRLSVIEPYSFRGLNYLKVLNV 339
Query: 317 KENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCNSP 370
N T+ ES+ + L T+ + +NP+ C C +LW+ R + N C+SP
Sbjct: 340 SSNFLTTLEESVFHSVGNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPTCSSP 396
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 76/286 (26%), Positives = 123/286 (43%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL + I+ + F L L L +N + +I + L L+ L + N +++
Sbjct: 73 LDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQ 132
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 133 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLYNLRSLEVGDNDLVF-ISHRAFHGLSSL 190
Query: 312 YHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP 370
L L++ TS +E+ L T+ + I + + R L R + N P
Sbjct: 191 EQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKR--LYRLKVLEI-ANWP 247
Query: 371 A--PLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 428
+ L L+ L A LT+I A R L LR L ++ N +Q I +L L
Sbjct: 248 YLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDL 307
Query: 429 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL+EL + S++E F+GL+YLK L ++ ++ LT + + F
Sbjct: 308 LRLQELYLVGGRLSVIEPYSFRGLNYLKVLNVS-SNFLTTLEESVF 352
Score = 169 (64.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 78/286 (27%), Positives = 130/286 (45%)
Query: 2 LVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVI-PSHSNP--SIQRLVLSTNRIK 58
L+D + R K +NP E S F + L E + I P N +Q L L +N++K
Sbjct: 72 LLDLSKN-RIKTINPDEFSAFPQLE-ELELNENTISAIEPGAFNNLYGLQTLGLRSNKLK 129
Query: 59 TVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIIS 115
+ + LS L +D+S +I+ F+ L L++ N + + S
Sbjct: 130 LIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSS 189
Query: 116 PRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LNV 174
++ + N ++ + F L +L L L + + S+ SF L L L +
Sbjct: 190 LEQLTLEKCN-LTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIANWPY 248
Query: 175 FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
T+ GL L++L + A LT+I A R L LR L ++ N +Q I +L L
Sbjct: 249 LDTMTTNCLYGLN-LTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQMIEGNRLHDL 307
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
RL+EL + S++E F+GL+YLK L ++ ++ LT + + F
Sbjct: 308 LRLQELYLVGGRLSVIEPYSFRGLNYLKVLNVS-SNFLTTLEESVF 352
Score = 166 (63.5 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 81/360 (22%), Positives = 146/360 (40%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
RS++ +L S+P + + TRL L++ +N + F L+ LE+ + ++
Sbjct: 50 RSVLCHRKKLMSVP-EGIPSETRL--LDLSKNRIKTINPDEFSAFPQLEELELN-ENTIS 105
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WP 332
+ GAF + I+ G GL NL L++ EN + M
Sbjct: 106 AIEPGAF-NNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 164
Query: 333 ELRTIDIAENPI----ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
LR++++ +N + + L E L + + A SL++L +L
Sbjct: 165 NLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLN- 223
Query: 389 AGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
+ +I D +F+ L L+ L + + L ++ T L L L L I + +
Sbjct: 224 ----INSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLN-LTSLTITNANLTSIPYL 278
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
+ L YL+ L ++ N ++ +G +IE + GL L
Sbjct: 279 ALRHLVYLRFLNMS--YNPIQMIEGNRLHDLLRLQELYLVGGRLSVIEPYSFRGLNYLKV 336
Query: 508 LNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCNSP 564
LN+ N T+ ES+ + L T+ + +NP+ C C +LW+ R + N C+SP
Sbjct: 337 LNVSSNFLTTLEESVFHSVGNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPTCSSP 396
Score = 120 (47.3 bits), Expect = 0.00075, P = 0.00075
Identities = 50/184 (27%), Positives = 81/184 (44%)
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWPE-----LRTIDIAENPIECGCN------IL 351
G+ G P+ N++E + + +++ PE R +D+++N I+ N
Sbjct: 34 GSATGCPSRCECNVQERSVLCHRKKLMSVPEGIPSETRLLDLSKNRIKT-INPDEFSAFP 92
Query: 352 WLREMLVRRNT-SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSL 410
L E+ + NT SA+ P + +L L + LG L I F GLS L L
Sbjct: 93 QLEELELNENTISAI-----EPGAFNNLYGL--QTLGLRSNKLKLIQLGVFTGLSNLTKL 145
Query: 411 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 470
+++N++ + L L LE+G N + F GLS L++L + NLT V
Sbjct: 146 DISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKC-NLTSVP 204
Query: 471 KGAF 474
AF
Sbjct: 205 TEAF 208
>UNIPROTKB|Q59HI8 [details] [associations]
symbol:TLR2 "Toll-like receptor" species:9823 "Sus scrofa"
[GO:0071727 "cellular response to triacyl bacterial lipopeptide"
evidence=IEA] [GO:0071726 "cellular response to diacyl bacterial
lipopeptide" evidence=IEA] [GO:0071224 "cellular response to
peptidoglycan" evidence=IEA] [GO:0071223 "cellular response to
lipoteichoic acid" evidence=IEA] [GO:0070891 "lipoteichoic acid
binding" evidence=IEA] [GO:0060907 "positive regulation of
macrophage cytokine production" evidence=IEA] [GO:0052063
"induction by symbiont of defense-related host nitric oxide
production" evidence=IEA] [GO:0051637 "Gram-positive bacterial cell
surface binding" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050830
"defense response to Gram-positive bacterium" evidence=IEA]
[GO:0050715 "positive regulation of cytokine secretion"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045429 "positive regulation of nitric oxide
biosynthetic process" evidence=IEA] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IEA] [GO:0042892
"chloramphenicol transport" evidence=IEA] [GO:0042834
"peptidoglycan binding" evidence=IEA] [GO:0042535 "positive
regulation of tumor necrosis factor biosynthetic process"
evidence=IEA] [GO:0042498 "diacyl lipopeptide binding"
evidence=IEA] [GO:0042497 "triacyl lipopeptide binding"
evidence=IEA] [GO:0042496 "detection of diacyl bacterial
lipopeptide" evidence=IEA] [GO:0042495 "detection of triacyl
bacterial lipopeptide" evidence=IEA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0035355 "Toll-like receptor 2-Toll-like receptor 6 protein
complex" evidence=IEA] [GO:0035354 "Toll-like receptor 1-Toll-like
receptor 2 protein complex" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032700 "negative regulation of interleukin-17 production"
evidence=IEA] [GO:0032695 "negative regulation of interleukin-12
production" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=IEA] [GO:0008329 "pattern
recognition receptor activity" evidence=IEA] [GO:0007252 "I-kappaB
phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0002752 "cell surface pattern
recognition receptor signaling pathway" evidence=IEA] [GO:0002687
"positive regulation of leukocyte migration" evidence=IEA]
[GO:0002238 "response to molecule of fungal origin" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0034134 "toll-like
receptor 2 signaling pathway" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR017241
InterPro:IPR027185 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0009897 GO:GO:0050830 GO:GO:0050715 GO:GO:0006954
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0002687
GO:GO:0044130 GO:GO:0051092 GO:GO:0032757 GO:GO:0045429
GO:GO:0004888 GO:GO:0030177 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0002755 GO:GO:0002238 GO:GO:0008329
GO:GO:0042535 GO:GO:0042346 GO:GO:0070891 GO:GO:0071223
GO:GO:0051637 GO:GO:0060907 GO:GO:0002752 GO:GO:0007252
SUPFAM:SSF52200 GO:GO:0032700 GO:GO:0071224
GeneTree:ENSGT00700000104367 GO:GO:0035354 GO:GO:0071727
GO:GO:0042495 GO:GO:0042497 HOGENOM:HOG000110611 HOVERGEN:HBG108574
PANTHER:PTHR24365:SF17 GO:GO:0035355 GO:GO:0042498 GO:GO:0071726
GO:GO:0042892 GO:GO:0042496 GO:GO:0052063 GO:GO:0034123 OMA:IDWPENY
EMBL:FP086612 EMBL:AB208696 UniGene:Ssc.17337
ProteinModelPortal:Q59HI8 SMR:Q59HI8 STRING:Q59HI8
Ensembl:ENSSSCT00000009859 Ensembl:ENSSSCT00000033729
ArrayExpress:Q59HI8 Uniprot:Q59HI8
Length = 785
Score = 178 (67.7 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 53/141 (37%), Positives = 81/141 (57%)
Query: 137 GLTA-LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLR 195
GLTA ++ L L +N++ V + L LR+G N T+ + +F+ LG L LDL
Sbjct: 50 GLTAAVKSLDLSNNRIAYVGSSDLRKCVNLRALRLGANSIHTVEEDSFSSLGSLEHLDLS 109
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSI-PTKQLSKLTRLEELEIGQNG-FSMLEAG 253
L+N+S + F+ LS L+ L L N +++ T S L L L+IG N F+ ++A
Sbjct: 110 YNHLSNLSSSWFKSLSTLKFLNLLGNPYKTLGETPLFSHLPNLRILKIGNNDTFAEIQAK 169
Query: 254 CFKGLSYLKRLEITGASNLTR 274
F+GL++L+ LEI GAS+L R
Sbjct: 170 DFQGLTFLQELEI-GASHLQR 189
Score = 124 (48.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 49/193 (25%), Positives = 88/193 (45%)
Query: 62 SAIPIYLS--LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQ-IVCSIISPR 117
S+IP L+ ++ +DLS+ + L L+L N H ++ S+ S
Sbjct: 45 SSIPSGLTAAVKSLDLSNNRIAYVGSSDLRKCVNLRALRLGANSIHTVEEDSFSSLGSLE 104
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSV-PTPSFIYLGMLAELRVGLN-VF 175
+++ N +S + + F+ L+ L+ L L N +++ TP F +L L L++G N F
Sbjct: 105 HLDL-SYNHLSNLSSSWFKSLSTLKFLNLLGNPYKTLGETPLFSHLPNLRILKIGNNDTF 163
Query: 176 TTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT 235
+ F GL L L++ + L + + R + + L+L R +P + L+
Sbjct: 164 AEIQAKDFQGLTFLQELEIGASHLQRYAPKSLRSIQNISHLILHMRRPALLPKIFVDLLS 223
Query: 236 RLEELEIGQNGFS 248
LE LE+ FS
Sbjct: 224 SLEYLELRNTDFS 236
Score = 122 (48.0 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 47/139 (33%), Positives = 76/139 (54%)
Query: 334 LRTIDIAENPIE-CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISL-SAEDLGCAGA 391
++++D++ N I G + L R+ V + NS ++ S SL S E L +
Sbjct: 55 VKSLDLSNNRIAYVGSSDL--RKC-VNLRALRLGANSIHTVEEDSFSSLGSLEHLDLSYN 111
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSI-PTKQLSKLTRLEELEIGQNG-FSMLEAGCF 449
L+N+S + F+ LS L+ L L N +++ T S L L L+IG N F+ ++A F
Sbjct: 112 HLSNLSSSWFKSLSTLKFLNLLGNPYKTLGETPLFSHLPNLRILKIGNNDTFAEIQAKDF 171
Query: 450 KGLSYLKRLEITGASNLTR 468
+GL++L+ LEI GAS+L R
Sbjct: 172 QGLTFLQELEI-GASHLQR 189
Score = 94 (38.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 45/185 (24%), Positives = 78/185 (42%)
Query: 16 PYEPSRFSTRDPS--CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSA-IPIYLSLQH 72
P++ S S DP+ C+ + +L IPS +++ L LS NRI V S+ + ++L+
Sbjct: 23 PHQASSLSC-DPAGVCDGRSRSLSSIPSGLTAAVKSLDLSNNRIAYVGSSDLRKCVNLRA 81
Query: 73 VDLSHTTWLIIPIGGFEPQEKLVELQL--NHNKHFPQQIVCSIISPRRVEIFGQNRISRI 130
+ L + + F L L L NH + S+ + + + + G +
Sbjct: 82 LRLGANSIHTVEEDSFSSLGSLEHLDLSYNHLSNLSSSWFKSLSTLKFLNLLGNPYKTLG 141
Query: 131 DQACFEGLTALRILYLDDNQ-LRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRL 189
+ F L LRIL + +N + F L L EL +G + A + + +
Sbjct: 142 ETPLFSHLPNLRILKIGNNDTFAEIQAKDFQGLTFLQELEIGASHLQRYAPKSLRSIQNI 201
Query: 190 SALDL 194
S L L
Sbjct: 202 SHLIL 206
Score = 91 (37.1 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 45/186 (24%), Positives = 77/186 (41%)
Query: 83 IPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
IP G K ++L N + + ++ R + + G N I +++ F L +L
Sbjct: 47 IP-SGLTAAVKSLDLSNNRIAYVGSSDLRKCVNLRALRL-GANSIHTVEEDSFSSLGSLE 104
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA-FNGLGRLSALDL-RGAGLT 200
L L N L ++ + F L L L + N + TL + F+ L L L +
Sbjct: 105 HLDLSYNHLSNLSSSWFKSLSTLKFLNLLGNPYKTLGETPLFSHLPNLRILKIGNNDTFA 164
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 260
I F+GL+ L+ L + + LQ K L + + L + ++L LS
Sbjct: 165 EIQAKDFQGLTFLQELEIGASHLQRYAPKSLRSIQNISHLILHMRRPALLPKIFVDLLSS 224
Query: 261 LKRLEI 266
L+ LE+
Sbjct: 225 LEYLEL 230
Score = 78 (32.5 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 38/138 (27%), Positives = 62/138 (44%)
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCNILWLREMLVRRNTS 363
LV L NL +L++ +N F S E+ WPE ++ ++++ I L L + T
Sbjct: 410 LVTLKNLTNLDISKNNFDSMPETC-QWPEKMKYLNLSSTRIHS------LTHCLPQ--TL 460
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
V S L SL ++L + L + D +F L L L ++ N + + +
Sbjct: 461 EVLDISNNNLNSFSLSLPQLKELYISRNKLKTLPDASF--LPMLSVLRISRNTINTFSKE 518
Query: 424 QLSKLTRLEELEIGQNGF 441
QL +L+ LE G N F
Sbjct: 519 QLDSFQKLKTLEAGGNNF 536
Score = 73 (30.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 36/155 (23%), Positives = 61/155 (39%)
Query: 407 LRSLVLTDNRLQSIPT--KQLSKLTRLEELEIGQNGFSMLEAGCF--KGLSYLKRLEITG 462
L +L+L N L+S+ + L L L L+I +N F + C + + YL L T
Sbjct: 390 LHTLILRQNHLKSLEKTGEVLVTLKNLTNLDISKNNFDSMPETCQWPEKMKYLN-LSSTR 448
Query: 463 ASNLTRVRKGAF-----ADXXXXXXXXXXXXXXXXIIEEDALVGLPN------LYHLNLK 511
+LT ++ I + L LP+ L L +
Sbjct: 449 IHSLTHCLPQTLEVLDISNNNLNSFSLSLPQLKELYISRNKLKTLPDASFLPMLSVLRIS 508
Query: 512 ENAFTSFSESML-AWPELRTIDIAENPIECGCNIL 545
N +FS+ L ++ +L+T++ N C C+ L
Sbjct: 509 RNTINTFSKEQLDSFQKLKTLEAGGNNFICSCDFL 543
Score = 60 (26.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 45/177 (25%), Positives = 71/177 (40%)
Query: 308 LPNLYHLNLKENAFTS--FSESML--AWPELRTIDIAENPIEC----GCNILWLREM--- 356
L +L +L+L EN + S AWP L T+ + +N ++ G ++ L+ +
Sbjct: 360 LKSLEYLDLSENLMSEEYLKNSACEHAWPFLHTLILRQNHLKSLEKTGEVLVTLKNLTNL 419
Query: 357 -LVRRNTSAV--FCNSPAPLKYKSLISLSAEDLG-CAGAGLT--NISDNAFRGLS-GLRS 409
+ + N ++ C P +KY +L S L C L +IS+N S L
Sbjct: 420 DISKNNFDSMPETCQWPEKMKYLNLSSTRIHSLTHCLPQTLEVLDISNNNLNSFSLSLPQ 479
Query: 410 LV-LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 465
L L +R + S L L L I +N + LK LE G +N
Sbjct: 480 LKELYISRNKLKTLPDASFLPMLSVLRISRNTINTFSKEQLDSFQKLKTLE-AGGNN 535
Score = 48 (22.0 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 502 LPNLYHLNLKENAFTS--FSESML--AWPELRTIDIAENPIEC----GCNILWLREM--- 550
L +L +L+L EN + S AWP L T+ + +N ++ G ++ L+ +
Sbjct: 360 LKSLEYLDLSENLMSEEYLKNSACEHAWPFLHTLILRQNHLKSLEKTGEVLVTLKNLTNL 419
Query: 551 -LVRRNTSAV--FCNSPAPLKYKSLISLSAEDL 580
+ + N ++ C P +KY +L S L
Sbjct: 420 DISKNNFDSMPETCQWPEKMKYLNLSSTRIHSL 452
Score = 45 (20.9 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
F+GL+ L+ L + + LQ K L + + L + ++L LS L+ LE+
Sbjct: 171 FQGLTFLQELEIGASHLQRYAPKSLRSIQNISHLILHMRRPALLPKIFVDLLSSLEYLEL 230
>UNIPROTKB|O94933 [details] [associations]
symbol:SLITRK3 "SLIT and NTRK-like protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 GO:GO:0016021 EMBL:CH471052 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AB020655 EMBL:AK290024 EMBL:BC114621
IPI:IPI00016467 RefSeq:NP_055741.2 UniGene:Hs.101745
ProteinModelPortal:O94933 SMR:O94933 STRING:O94933
PhosphoSite:O94933 PRIDE:O94933 Ensembl:ENST00000241274
Ensembl:ENST00000475390 GeneID:22865 KEGG:hsa:22865 UCSC:uc003fej.4
CTD:22865 GeneCards:GC03M164904 H-InvDB:HIX0003827 HGNC:HGNC:23501
HPA:HPA017636 MIM:609679 neXtProt:NX_O94933 PharmGKB:PA134958002
eggNOG:NOG292495 InParanoid:O94933 OMA:IAPYQTR OrthoDB:EOG473PQR
PhylomeDB:O94933 GenomeRNAi:22865 NextBio:43383 ArrayExpress:O94933
Bgee:O94933 CleanEx:HS_SLITRK3 Genevestigator:O94933
GermOnline:ENSG00000121871 Uniprot:O94933
Length = 977
Score = 143 (55.4 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 40/125 (32%), Positives = 58/125 (46%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N +R + T SF++L + +G N + GAFNGL L L L L
Sbjct: 82 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFR 141
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N ++ I + L++L L + N ML FK +S L
Sbjct: 142 NDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVS-LTH 200
Query: 264 LEITG 268
L++ G
Sbjct: 201 LDLRG 205
Score = 139 (54.0 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 59/212 (27%), Positives = 93/212 (43%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N + I F GL L+ LYL +N+L +F+ L L L+ NV + GA
Sbjct: 109 GNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVIKRIESGA 168
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK-QLSKLTR-LEEL 240
F L +L L L + + N F+ +S L L L NRL+ + + L + R L EL
Sbjct: 169 FRNLSKLRVLILNDNLIPMLPTNLFKAVS-LTHLDLRGNRLKVLFYRGMLDHIGRSLMEL 227
Query: 241 EIGQNGFSML-EAGCFKGLSYLKRLEITG-ASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
++ +N ++ E K S+L+R+ T ++T F
Sbjct: 228 QLEENPWNCTCEIVQLK--SWLERIPYTALVGDITCETPFHFHGKDLREIRKTELCPLLS 285
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
E A +G+P + + KENA+ + SML+
Sbjct: 286 DSEVEASLGIP--HSSSSKENAWPTKPSSMLS 315
Score = 123 (48.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I +I ++ F ++L +L+L +N++ V +FI L L L + N L G F
Sbjct: 418 NLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFR 477
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L + I AF + L+ L L +N L+++PT + T L L + +
Sbjct: 478 GLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAG-TSLARLNLRK 536
Query: 245 NGFSMLE-AGCFKGLSYLKRLEI 266
N F L AG + L+ + ++++
Sbjct: 537 NYFLYLPVAGVLEHLNAIVQIDL 559
Score = 122 (48.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 37/123 (30%), Positives = 53/123 (43%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N ++ + F L L +G N + + DGAF L L +L L G + ++
Sbjct: 413 LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLT 472
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
FRGL L L N ++ I S + L+ L + N L F G S L R
Sbjct: 473 PGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTS-LAR 531
Query: 264 LEI 266
L +
Sbjct: 532 LNL 534
Score = 117 (46.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 58/245 (23%), Positives = 99/245 (40%)
Query: 343 PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
P C CN L + ++ + N N+ + L + L +A+ L + + I + F
Sbjct: 374 PTGCTCN-LHINDLGLTVNCKERGFNNISELLPRPL---NAKKLYLSSNLIQKIYRSDFW 429
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
S L L L +NR+ + L L+ L + N L G F+GL L L
Sbjct: 430 NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFE- 488
Query: 463 ASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSES 521
N+ R ++ AF+ + DA G +L LNL++N F +
Sbjct: 489 -FNVIREIQPAAFS-LMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVA 545
Query: 522 MLA--WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISL 575
+ + ID+ ENP +C C+++ W+ + V C SP L ++ + ++
Sbjct: 546 GVLEHLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHRDVRTI 605
Query: 576 SAEDL 580
E L
Sbjct: 606 ELEVL 610
Score = 53 (23.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ--EKLVELQLNHNKHFPQ 107
L+L+ N I + + + +SL H+DL ++ G L+ELQL N P
Sbjct: 178 LILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVLFYRGMLDHIGRSLMELQLEEN---PW 234
Query: 108 QIVCSII 114
C I+
Sbjct: 235 NCTCEIV 241
>UNIPROTKB|F1RZN4 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0032722 "positive
regulation of chemokine production" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 PANTHER:PTHR24365:SF5 EMBL:CU466336
Ensembl:ENSSSCT00000017206 Uniprot:F1RZN4
Length = 902
Score = 208 (78.3 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 97/406 (23%), Positives = 161/406 (39%)
Query: 74 DLSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRID 131
D SH IP + + L L HN + P +I S G N IS+++
Sbjct: 37 DCSHLKLTQIPD---DLPANITVLNLTHNQLRRLPPANF-TIYSQLTTLDGGFNTISKLE 92
Query: 132 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 191
+ L L IL L N+L + +FI+ L EL + N + + F L L
Sbjct: 93 PELCQSLPLLEILNLQHNELSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIK 152
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL--TRLEELEIGQNGFSM 249
LDL GL++ L L+ L+L +N++ ++ ++L L + L+ LE+ N
Sbjct: 153 LDLSHNGLSSTKLGTQLQLENLQELLLANNKISALKREELDFLGNSSLKRLELSSNQIQE 212
Query: 250 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP 309
GCF + L L + + + + + +
Sbjct: 213 FSPGCFHAIGKLFGLSLNNVKLSPSLTEKLCLELSNTSIENLSLSNAVQNQQHDFGLKQT 272
Query: 310 NLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIE-------CGC-NILWL--REMLV 358
NL L+L N+ + AW P L+ + N IE G N+ +L R
Sbjct: 273 NLSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSFT 332
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN--R 416
+++ S ++ L SL E L I N F GL L+SL L+++
Sbjct: 333 KQSISLASLPKIEDFSFQWLKSL--EYLNMEDNNFPGIKRNTFTGLIKLKSLSLSNSFSS 390
Query: 417 LQSIPTKQLSKL--TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
L+++ + L + L L + +N S +E+G F L +LK L++
Sbjct: 391 LRTLTNETFISLADSPLLILNLTKNKISKIESGAFSWLGHLKVLDL 436
Score = 144 (55.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 86/351 (24%), Positives = 135/351 (38%)
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
+ +L L NQLR +P +F L L G N + L L L L+L+ L+
Sbjct: 54 ITVLNLTHNQLRRLPPANFTIYSQLTTLDGGFNTISKLEPELCQSLPLLEILNLQHNELS 113
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 260
+SD F L L L N +Q I L L +L++ NG S + G L
Sbjct: 114 QLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHNGLSSTKLGTQLQLEN 173
Query: 261 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE--EGALVGLPNLYHLNLKE 318
L+ L + A+N K D E G + L+ L+L
Sbjct: 174 LQELLL--ANNKISALKREELDFLGNSSLKRLELSSNQIQEFSPGCFHAIGKLFGLSLNN 231
Query: 319 NAFT-SFSESM---LAWPELRTIDIAENPIECGCNILWLRE----ML-VRRNTSAVFCNS 369
+ S +E + L+ + + ++ N ++ + L++ ML + N+ +V N
Sbjct: 232 VKLSPSLTEKLCLELSNTSIENLSLS-NAVQNQQHDFGLKQTNLSMLDLSHNSLSVIGND 290
Query: 370 P---AP-LKYKSLISLSAEDLGCAGA-GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 424
P LKY L + E L GL+N+ R +S+ L L I
Sbjct: 291 SFAWLPHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSFTKQSISLAS--LPKIEDFS 348
Query: 425 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA-SNLTRVRKGAF 474
L LE L + N F ++ F GL LK L ++ + S+L + F
Sbjct: 349 FQWLKSLEYLNMEDNNFPGIKRNTFTGLIKLKSLSLSNSFSSLRTLTNETF 399
Score = 141 (54.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 105/468 (22%), Positives = 185/468 (39%)
Query: 31 LQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS----AI-PIY-LSLQHVDLSH--TTWLI 82
L+ LD + N S++RL LS+N+I+ AI ++ LSL +V LS T L
Sbjct: 187 LKREELDFL---GNSSLKRLELSSNQIQEFSPGCFHAIGKLFGLSLNNVKLSPSLTEKLC 243
Query: 83 IPIGGFEPQEKLVELQLNHNKH-FP-QQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
+ + + + + + +H F +Q S++ N +S I F L
Sbjct: 244 LELSNTSIENLSLSNAVQNQQHDFGLKQTNLSMLD------LSHNSLSVIGNDSFAWLPH 297
Query: 141 LRILYLDDNQLRSVPTPSFI------YLGM---LAELRVGLNVFTTLADGAFNGLGRLSA 191
L+ +L+ N + + + S YL + + + L + D +F L L
Sbjct: 298 LKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSFTKQSISLASLPKIEDFSFQWLKSLEY 357
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDN--RLQSIPTKQLSKL--TRLEELEIGQNGF 247
L++ I N F GL L+SL L+++ L+++ + L + L L + +N
Sbjct: 358 LNMEDNNFPGIKRNTFTGLIKLKSLSLSNSFSSLRTLTNETFISLADSPLLILNLTKNKI 417
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
S +E+G F L +LK L++ G + + + G + +
Sbjct: 418 SKIESGAFSWLGHLKVLDL-GLNEIGQELTGQEWRGLKNIVEVYLSYNRYLELTTDSFAL 476
Query: 308 LPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
+P+L L L+ A LR +D + +P N+ L L N + +
Sbjct: 477 VPSLQQLMLRRVA-------------LRNMDCSPSPFHPLFNLTILD--LSNNNIANIND 521
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAF-RGLSGLRSLVLTDNRLQSIPTKQLS 426
L+ ++ L +L F +GLS L L L N IP
Sbjct: 522 ELLKGLEKLQILDLQHNNLARLWKHANPGGPVQFLKGLSHLHILNLESNGFDEIPADAFR 581
Query: 427 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L+ L+ +++G N ++L F LK L + + +T V+K F
Sbjct: 582 DLSELKSIDLGLNNLNILPPSVFDNQVSLKSLSLQ-KNLITSVKKTVF 628
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 95/426 (22%), Positives = 163/426 (38%)
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L+ L + N + + + +F L L L + +S + GLS ++ L N +
Sbjct: 274 LSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIERLSSRSLYGLSNVKYL----NLRR 329
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 284
S TKQ L L ++E F L K L YL + +N +++ F
Sbjct: 330 SF-TKQSISLASLPKIE--DFSFQWL-----KSLEYLNMED----NNFPGIKRNTFTGLI 377
Query: 285 XXXXXXXXXXXXXX-XIEEGALVGLPN--LYHLNLKENAFTSFSESMLAW-PELRTIDIA 340
+ + L + L LNL +N + +W L+ +D+
Sbjct: 378 KLKSLSLSNSFSSLRTLTNETFISLADSPLLILNLTKNKISKIESGAFSWLGHLKVLDLG 437
Query: 341 ENPIECGCNILWLREMLVRRNTSAVFC--NSPAPLKYKSLISL-SAEDLGCAGAGLTNI- 396
N E G + +E +N V+ N L S + S + L L N+
Sbjct: 438 LN--EIGQELTG-QEWRGLKNIVEVYLSYNRYLELTTDSFALVPSLQQLMLRRVALRNMD 494
Query: 397 -SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML----EAG---- 447
S + F L L L L++N + +I + L L +L+ L++ N + L G
Sbjct: 495 CSPSPFHPLFNLTILDLSNNNIANINDELLKGLEKLQILDLQHNNLARLWKHANPGGPVQ 554
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
KGLS+L L + ++ + AF D I+ +L
Sbjct: 555 FLKGLSHLHILNLE-SNGFDEIPADAFRDLSELKSIDLGLNNLN-ILPPSVFDNQVSLKS 612
Query: 508 LNLKENAFTSFSESML--AWPELRTIDIAENPIECGC-NILWLREMLVRRNT------SA 558
L+L++N TS +++ A+ +L +D+ NP +C C +I W + +T S
Sbjct: 613 LSLQKNLITSVKKTVFGPAFQKLSNLDMRFNPFDCTCESIAWFVSWINSTHTNISELSSH 672
Query: 559 VFCNSP 564
CN+P
Sbjct: 673 YLCNTP 678
>UNIPROTKB|F1N513 [details] [associations]
symbol:LOC527364 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:IAPYQTR EMBL:DAAA02002302
IPI:IPI00907843 RefSeq:XP_003585735.1 RefSeq:XP_003585736.1
Ensembl:ENSBTAT00000022827 GeneID:527364 KEGG:bta:527364
Uniprot:F1N513
Length = 980
Score = 143 (55.4 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 40/125 (32%), Positives = 58/125 (46%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N +R + T SF++L + +G N + GAFNGL L L L L
Sbjct: 83 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDIFR 142
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N ++ I + L++L L + N ML FK +S L
Sbjct: 143 NDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVS-LTH 201
Query: 264 LEITG 268
L++ G
Sbjct: 202 LDLRG 206
Score = 142 (55.0 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 61/212 (28%), Positives = 94/212 (44%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N + I F GL L+ LYL +N+L +F+ L L L+ NV + GA
Sbjct: 110 GNNALQDIQTGAFNGLKILKRLYLHENKLDIFRNDTFLGLESLEYLQADYNVIKRIESGA 169
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK-QLSKLTR-LEEL 240
F L +L L L + + N F+ +S L L L NRL+ + + L + R L EL
Sbjct: 170 FRNLSKLRVLILNDNLIPMLPTNLFKAVS-LTHLDLRGNRLKVLFYRGMLDHIGRSLMEL 228
Query: 241 EIGQNGFSML-EAGCFKGLSYLKRLEITG-ASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
++ +N ++ E K S+L+R+ T ++T F
Sbjct: 229 QLEENPWNCTCEIVQLK--SWLERIPYTALVGDITCETPFHFHGKDLREIRKTELCPLLS 286
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
E A +G+P+L N KENA+ + SML+
Sbjct: 287 DSEVEASLGIPHLSS-N-KENAWPTKPSSMLS 316
Score = 123 (48.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I +I ++ F ++L +L+L +N++ V +FI L L L + N L G F
Sbjct: 419 NLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFR 478
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L + I AF + L+ L L +N L+++PT + T L L + +
Sbjct: 479 GLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAG-TSLARLNLRK 537
Query: 245 NGFSMLE-AGCFKGLSYLKRLEI 266
N F L AG + L+ + ++++
Sbjct: 538 NYFLYLPVAGVLEHLNAIVQIDL 560
Score = 122 (48.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 37/123 (30%), Positives = 53/123 (43%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N ++ + F L L +G N + + DGAF L L +L L G + ++
Sbjct: 414 LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLT 473
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
FRGL L L N ++ I S + L+ L + N L F G S L R
Sbjct: 474 PGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTS-LAR 532
Query: 264 LEI 266
L +
Sbjct: 533 LNL 535
Score = 117 (46.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 58/245 (23%), Positives = 99/245 (40%)
Query: 343 PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
P C CN L + ++ + N N+ + L + L +A+ L + + I + F
Sbjct: 375 PTGCTCN-LHINDLGLTVNCKERGFNNISELLPRPL---NAKKLYLSSNLIQKIYRSDFW 430
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
S L L L +NR+ + L L+ L + N L G F+GL L L
Sbjct: 431 NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFE- 489
Query: 463 ASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSES 521
N+ R ++ AF+ + DA G +L LNL++N F +
Sbjct: 490 -FNVIREIQPAAFS-LMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVA 546
Query: 522 MLA--WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISL 575
+ + ID+ ENP +C C+++ W+ + V C SP L ++ + ++
Sbjct: 547 GVLEHLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHRDVRTI 606
Query: 576 SAEDL 580
E L
Sbjct: 607 ELEVL 611
Score = 53 (23.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ--EKLVELQLNHNKHFPQ 107
L+L+ N I + + + +SL H+DL ++ G L+ELQL N P
Sbjct: 179 LILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVLFYRGMLDHIGRSLMELQLEEN---PW 235
Query: 108 QIVCSII 114
C I+
Sbjct: 236 NCTCEIV 242
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 202 (76.2 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 71/223 (31%), Positives = 97/223 (43%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTV--DSAIPIYLSLQHVDLSHTTWLIIP 84
P+ + Q N +P P QRL L N I + S P L+L S+ I P
Sbjct: 39 PTVSCQANNFSAVPRALPPGTQRLFLQNNLIGALRPGSFGPSLLTLWL--FSNNLSAIYP 96
Query: 85 IGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR--ISRIDQACFEGLTALR 142
G F + L EL L N+H + R++ R +S + F GL +L+
Sbjct: 97 -GTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQ 155
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
LYL +N L + F L L+ L + N L + F GLG L L L G L +
Sbjct: 156 YLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGV 215
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
AFRGL L L L +N L S+P + L+ L LE L + N
Sbjct: 216 HRAAFRGLGRLTILYLFNNSLASLPGEALADLPSLEFLRLNAN 258
Score = 168 (64.2 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 69/259 (26%), Positives = 104/259 (40%)
Query: 90 PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDD 148
P V Q N+ P+ + P +F QN I + F G +L L+L
Sbjct: 36 PAPPTVSCQANNFSAVPRAL-----PPGTQRLFLQNNLIGALRPGSF-G-PSLLTLWLFS 88
Query: 149 NQLRSVPTPSFIYLGMLAELRVGLNV-FTTLADGAFNGLGRLSALDLRGAGLTNISDNAF 207
N L ++ +F +L L EL +G N +L F GL RL +L L L+++ F
Sbjct: 89 NNLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIF 148
Query: 208 RGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 267
RGL L+ L L +N L + + L L L + N +L F+GL L RL +
Sbjct: 149 RGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLH 208
Query: 268 GASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSES 327
G + L V + AF E AL LP+L L L N + +
Sbjct: 209 G-NRLQGVHRAAFRGLGRLTILYLFNNSLASLPGE-ALADLPSLEFLRLNANPWACDCRA 266
Query: 328 MLAWPELRTIDIAENPIEC 346
W + ++ + + C
Sbjct: 267 RPLWAWFQRARVSSSDVTC 285
Score = 146 (56.5 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 68/257 (26%), Positives = 103/257 (40%)
Query: 144 LYLDDNQLRSVPTPSFIYLG-MLAELRVGLNVFTTLADGAFNGLGRLSALDLR-GAGLTN 201
L+L +N + ++ SF G L L + N + + G F L L LDL L +
Sbjct: 62 LFLQNNLIGALRPGSF---GPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRS 118
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
+ + F+GL L+SL L +L S+P L L+ L + +N L+ F L+ L
Sbjct: 119 LEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANL 178
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
L + G + L + + F + A GL L L L N+
Sbjct: 179 SHLFLHG-NRLRLLTEHVFRGLGSLDRLLLHGNRLQG-VHRAAFRGLGRLTILYLFNNSL 236
Query: 322 TSF-SESMLAWPELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYKSL 378
S E++ P L + + NP C C LW R ++S V C SP + + L
Sbjct: 237 ASLPGEALADLPSLEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCASPPERRGRDL 296
Query: 379 ISLSAEDL-GCAGAGLT 394
+L D C A T
Sbjct: 297 RALREADFQACPPAAPT 313
Score = 135 (52.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 64/243 (26%), Positives = 98/243 (40%)
Query: 340 AENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
A P G ++L L L N SA++ P ++ L +L DLG L ++ +
Sbjct: 71 ALRPGSFGPSLLTL--WLFSNNLSAIY-----PGTFRHLQALEELDLG-DNRHLRSLEPD 122
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
F+GL L+SL L +L S+P L L+ L + +N L+ F L+ L L
Sbjct: 123 TFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLF 182
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF- 518
+ G + L + + F + A GL L L L N+ S
Sbjct: 183 LHG-NRLRLLTEHVFRGLGSLDRLLLHGNRLQGV-HRAAFRGLGRLTILYLFNNSLASLP 240
Query: 519 SESMLAWPELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYKSLISLS 576
E++ P L + + NP C C LW R ++S V C SP + + L +L
Sbjct: 241 GEALADLPSLEFLRLNANPWACDCRARPLWAWFQRARVSSSDVTCASPPERRGRDLRALR 300
Query: 577 AED 579
D
Sbjct: 301 EAD 303
>UNIPROTKB|F1PE17 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060658 "nipple morphogenesis" evidence=IEA]
[GO:0060427 "lung connective tissue development" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50262
PROSITE:PS51450 GO:GO:0016021 GO:GO:0030154 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
GO:GO:0007188 GO:GO:0007567 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0060427 OMA:YTLTTRP GO:GO:0060658
GeneTree:ENSGT00650000093266 EMBL:AAEX03010082 EMBL:AAEX03010083
ProteinModelPortal:F1PE17 Ensembl:ENSCAFT00000013759 Uniprot:F1PE17
Length = 696
Score = 206 (77.6 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 73/273 (26%), Positives = 123/273 (45%)
Query: 11 SKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLS 69
S+C+ P + R + E NL +PS S+ ++ + L N I+ + Y +
Sbjct: 31 SECLVGSVPMQCVCRGLEVDCDETNLRAVPSVSS-NVTLMSLRWNLIRKLPPDGFRKYHN 89
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRIS 128
LQ + L + IPI F L +L L+HN+ F + V + I N +S
Sbjct: 90 LQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLS 149
Query: 129 RIDQACFEGLTALRILYLDDNQLRSVPT-PSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
RI F GL +L +L L +N L +P P Y+ L L + N L + F G
Sbjct: 150 RISPLTFYGLNSLILLALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHNLRNLTFISCG 209
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L+ L +R + ++++N F L L L L N+++++P + L L +L + N
Sbjct: 210 NLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLNLSYNPI 269
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
++A F L LK L + G ++ +++ F
Sbjct: 270 QKIQADQFDYLVKLKSLSLEGIE-ISNIQQRMF 301
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 58/227 (25%), Positives = 99/227 (43%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-----SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLN 100
++Q+L L N+I++ IPIY SL + LSH + G FE +L L +
Sbjct: 89 NLQKLCLQNNKIRS----IPIYAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIE 144
Query: 101 HNKHFPQQIVCSIISPRRVEIFG--QNRISRI-DQACFEGLTALRILYLDDNQLRSVPTP 157
N H + + + + N ++ + D+ + + L L L+DN + ++
Sbjct: 145 DN-HLSRISPLTFYGLNSLILLALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHNLRNL 203
Query: 158 SFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLV 217
+FI G L L + N L + F L +L+ LDL + N+ F+ L L L
Sbjct: 204 TFISCGNLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLN 263
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
L+ N +Q I Q L +L+ L + S ++ F+ L L +
Sbjct: 264 LSYNPIQKIQADQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 310
Score = 131 (51.2 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 47/158 (29%), Positives = 71/158 (44%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I ++ F L+ L L +N++RS+P +F L L +L + N T L G F
Sbjct: 74 NLIRKLPPDGFRKYHNLQKLCLQNNKIRSIPIYAFRGLHSLTKLYLSHNRITFLKPGVFE 133
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK-LTRLEELEIG 243
L RL L + L+ IS F GL+ L L L +N L +P K L + + RL L++
Sbjct: 134 DLHRLEWLIIEDNHLSRISPLTFYGLNSLILLALMNNVLTHLPDKPLCQYMPRLHWLDLE 193
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
N L F L L + + + + + FA
Sbjct: 194 DNHIHNLRNLTFISCGNLTVL-VMRKNKINHLNENTFA 230
Score = 87 (35.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
+ ++++N F L L L L N+++++P + L L +L + N ++A F L
Sbjct: 221 INHLNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLNLSYNPIQKIQADQFDYL 280
Query: 453 SYLKRLEITGASNLTRVRKGAF 474
LK L + G ++ +++ F
Sbjct: 281 VKLKSLSLEGIE-ISNIQQRMF 301
>UNIPROTKB|Q9H156 [details] [associations]
symbol:SLITRK2 "SLIT and NTRK-like protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:Y19205 EMBL:AY358828 EMBL:AK091015
EMBL:AK289732 EMBL:AL109653 EMBL:BC113011 EMBL:BC113012
EMBL:AB058757 IPI:IPI00176104 IPI:IPI00410358 RefSeq:NP_001137475.1
RefSeq:NP_001137476.1 RefSeq:NP_001137477.1 RefSeq:NP_001137478.1
RefSeq:NP_001137480.1 RefSeq:NP_001137481.1 RefSeq:NP_001137482.1
RefSeq:NP_115928.1 UniGene:Hs.320368 ProteinModelPortal:Q9H156
SMR:Q9H156 STRING:Q9H156 PhosphoSite:Q9H156 DMDM:46397026
PaxDb:Q9H156 PRIDE:Q9H156 Ensembl:ENST00000370490
Ensembl:ENST00000413937 Ensembl:ENST00000428560
Ensembl:ENST00000434188 Ensembl:ENST00000447897 GeneID:84631
KEGG:hsa:84631 UCSC:uc004fcd.3 CTD:84631 GeneCards:GC0XP144900
H-InvDB:HIX0017096 H-InvDB:HIX0176721 HGNC:HGNC:13449 HPA:HPA051847
MIM:300561 neXtProt:NX_Q9H156 PharmGKB:PA134968225 eggNOG:NOG147171
InParanoid:Q9H156 OMA:LQADYNY PhylomeDB:Q9H156 ChiTaRS:SLITRK2
GenomeRNAi:84631 NextBio:74551 ArrayExpress:Q9H156 Bgee:Q9H156
CleanEx:HS_SLITRK2 Genevestigator:Q9H156 GermOnline:ENSG00000185985
Uniprot:Q9H156
Length = 845
Score = 140 (54.3 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 90 PQEKLVELQLNHN---KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
PQ ++ +L LN N + +P + V + + + + G N + I F GL L+ L+L
Sbjct: 60 PQYRIYQLFLNGNLLTRLYPNEFV-NYSNAVTLHL-GNNGLQEIRTGAFSGLKTLKRLHL 117
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
++N+L + +F+ L L L+ N + + GAF+ L +L L L L ++ N
Sbjct: 118 NNNKLEILREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNV 177
Query: 207 FRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQN 245
FR + L L L NRL+ +P L + + E+++ +N
Sbjct: 178 FRFVL-LTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 135 (52.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 60/227 (26%), Positives = 96/227 (42%)
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
R+ L L G LT + N F S +L L +N LQ I T S L L+ L + N
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKL 122
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
+L F GL L+ L+ + ++ + GAF+ + + L+
Sbjct: 123 EILREDTFLGLESLEYLQ-ADYNYISAIEAGAFSKLNKLKVLI---------LNDNLLLS 172
Query: 308 LPN-------LYHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML- 357
LP+ L HL+L+ N F+ + + I + ENP C C++L L+ L
Sbjct: 173 LPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLD 232
Query: 358 -VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRG 403
+ + C +P L K + L+ +DL C + SD++ RG
Sbjct: 233 TITVFVGEIVCETPFRLHGKDVTQLTRQDL-CPRK---SASDSSQRG 275
Score = 129 (50.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI+ I + F LT+LR LYL+ N L + F L L L + NV +
Sbjct: 407 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLT 466
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ L L L L L ++ DN F G + L L L +N +P K L +L +++
Sbjct: 467 FDALINLQLLFLNNNLLRSLPDNIFGG-TALTRLNLRNNHFSHLPVKGVLDQLPAFIQID 525
Query: 242 IGQN 245
+ +N
Sbjct: 526 LQEN 529
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 52/199 (26%), Positives = 85/199 (42%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
LT + N F S +L L +N LQ I T S L L+ L + N +L F GL
Sbjct: 74 LTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGL 133
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN-------L 505
L+ L+ + ++ + GAF+ I+ ++ L+ LP+ L
Sbjct: 134 ESLEYLQ-ADYNYISAIEAGAFSKLNKLKVL---------ILNDNLLLSLPSNVFRFVLL 183
Query: 506 YHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML--VRRNTSAVFC 561
HL+L+ N F+ + + I + ENP C C++L L+ L + + C
Sbjct: 184 THLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVC 243
Query: 562 NSPAPLKYKSLISLSAEDL 580
+P L K + L+ +DL
Sbjct: 244 ETPFRLHGKDVTQLTRQDL 262
Score = 122 (48.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 56/213 (26%), Positives = 84/213 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L G L + N S L L L +NR+ I + LT L L + N +L
Sbjct: 380 LYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLY 439
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L + N+ + K D + + G L
Sbjct: 440 PSMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTA-L 496
Query: 312 YHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--- 366
LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 497 TRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEV 556
Query: 367 -CNSPAPLKYKSLISLSAEDLGCAGAGLTNISD 398
C SPA + L L E + C + N+SD
Sbjct: 557 TCESPAKHAGEILKFLGREAI-CPDS--PNLSD 586
Score = 118 (46.6 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 50/190 (26%), Positives = 75/190 (39%)
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
S + L G L + N S L L L +NR+ I + LT L L + N
Sbjct: 376 SPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYL 435
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVG 501
+L F GL L+ L + N+ + K D + D + G
Sbjct: 436 EVLYPSMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLP-DNIFG 492
Query: 502 LPNLYHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 559
L LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 493 GTALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVI 552
Query: 560 F----CNSPA 565
C SPA
Sbjct: 553 INEVTCESPA 562
Score = 112 (44.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 44/181 (24%), Positives = 74/181 (40%)
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
++V + S V P+ S S + ++ C TNISD + S + L LT N
Sbjct: 327 IMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSP-KKLYLTGN 385
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
LQ++ L + + L+ L +G N ++++ G F L+ L+RL + G N V +
Sbjct: 386 YLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNG--NYLEVLYPSMF 443
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 535
D I+ L NL L L N S +++ L +++
Sbjct: 444 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRN 503
Query: 536 N 536
N
Sbjct: 504 N 504
Score = 112 (44.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L+L+ N L + F+ L +G N + GAF+GL L L L L +
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILR 126
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N + +I SKL +L+ L + N L + F+ + L
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTH 185
Query: 264 LEITG 268
L++ G
Sbjct: 186 LDLRG 190
Score = 107 (42.7 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 139 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198
T+ + LYL N L++V + L L +G N + +GAF L L L L G
Sbjct: 375 TSPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNY 434
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
L + + F GL L+ L L N ++ I L L+ L + N L F G
Sbjct: 435 LEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT 494
Query: 259 SYLKRLEI 266
+ L RL +
Sbjct: 495 A-LTRLNL 501
Score = 104 (41.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 37/143 (25%), Positives = 60/143 (41%)
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
TNISD + S + L LT N LQ++ L + + L+ L +G N ++++ G F L+
Sbjct: 365 TNISDLQPKPTSP-KKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLT 423
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L+RL + G N V + D I+ L NL L L N
Sbjct: 424 SLRRLYLNG--NYLEVLYPSMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNN 481
Query: 320 AFTSFSESMLAWPELRTIDIAEN 342
S +++ L +++ N
Sbjct: 482 LLRSLPDNIFGGTALTRLNLRNN 504
Score = 79 (32.9 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 83 IPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
I G F + L L LN+NK + + S ++ N IS I+ F L
Sbjct: 101 IRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQA-DYNYISAIEAGAFSKLNK 159
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA-DGAFNGLGRLSALDL 194
L++L L+DN L S+P+ F ++ +L L + N + G +G + + L
Sbjct: 160 LKVLILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQL 213
Score = 63 (27.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG-FEPQEKLVELQLNHNKHFPQQ 108
L+L+ N + ++ S + ++ L H+DL ++P G E ++E+QL N P
Sbjct: 163 LILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN---PWN 219
Query: 109 IVCSII 114
C ++
Sbjct: 220 CTCDLL 225
>UNIPROTKB|F1RQ61 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:FP236785 RefSeq:XP_003135487.1
Ensembl:ENSSSCT00000013911 Ensembl:ENSSSCT00000034054
Ensembl:ENSSSCT00000034972 Ensembl:ENSSSCT00000035609
GeneID:100511615 KEGG:ssc:100511615 Uniprot:F1RQ61
Length = 849
Score = 140 (54.3 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 90 PQEKLVELQLNHN---KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
PQ ++ +L LN N + +P + V + + + + G N + I F GL L+ L+L
Sbjct: 60 PQYRIYQLFLNGNLLTRLYPNEFV-NYSNAVTLHL-GNNGLQEIRTGAFSGLKTLKRLHL 117
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
++N+L + +F+ L L L+ N + + GAF+ L +L L L L ++ N
Sbjct: 118 NNNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNV 177
Query: 207 FRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQN 245
FR + L L L NRL+ +P L + + E+++ +N
Sbjct: 178 FRFVL-LTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN 216
Score = 132 (51.5 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 55/210 (26%), Positives = 88/210 (41%)
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
R+ L L G LT + N F S +L L +N LQ I T S L L+ L + N
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKL 122
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
+L F GL L+ L+ + ++ + GAF+ + + L+
Sbjct: 123 EVLREDTFLGLESLEYLQ-ADYNYISAIEAGAFSKLNKLKVLI---------LNDNLLLS 172
Query: 308 LPN-------LYHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML- 357
LP+ L HL+L+ N F+ + + I + ENP C C++L L+ L
Sbjct: 173 LPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLD 232
Query: 358 -VRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
+ + C +P L K + L+ +DL
Sbjct: 233 TITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Score = 129 (50.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI+ I + F LT+LR LYL+ N L + F L L L + NV +
Sbjct: 411 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMFDGLQSLQYLYLEYNVIKEIKPLT 470
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ L L L L L ++ DN F G + L L L +N +P K L +L +++
Sbjct: 471 FDALINLQLLFLNNNLLRSLPDNIFGG-TALTRLNLRNNHFSHLPVKGVLDQLPAFIQID 529
Query: 242 IGQN 245
+ +N
Sbjct: 530 LQEN 533
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 52/199 (26%), Positives = 85/199 (42%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
LT + N F S +L L +N LQ I T S L L+ L + N +L F GL
Sbjct: 74 LTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGL 133
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN-------L 505
L+ L+ + ++ + GAF+ I+ ++ L+ LP+ L
Sbjct: 134 ESLEYLQ-ADYNYISAIEAGAFSKLNKLKVL---------ILNDNLLLSLPSNVFRFVLL 183
Query: 506 YHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML--VRRNTSAVFC 561
HL+L+ N F+ + + I + ENP C C++L L+ L + + C
Sbjct: 184 THLDLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVC 243
Query: 562 NSPAPLKYKSLISLSAEDL 580
+P L K + L+ +DL
Sbjct: 244 ETPFRLHGKDVTQLTRQDL 262
Score = 123 (48.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 56/220 (25%), Positives = 86/220 (39%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L G L + N S L L L +NR+ I + LT L L + N +L
Sbjct: 384 LYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLY 443
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L + N+ + K D + + G L
Sbjct: 444 PAMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTA-L 500
Query: 312 YHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--- 366
LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 501 TRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEV 560
Query: 367 -CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLS 405
C SPA + L L E + C + N+SD ++
Sbjct: 561 TCESPAKHAGEILKFLGREAI-CPDS--PNLSDGTILSMN 597
Score = 118 (46.6 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 50/190 (26%), Positives = 75/190 (39%)
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
S + L G L + N S L L L +NR+ I + LT L L + N
Sbjct: 380 SPKKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYL 439
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVG 501
+L F GL L+ L + N+ + K D + D + G
Sbjct: 440 EVLYPAMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLP-DNIFG 496
Query: 502 LPNLYHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 559
L LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 497 GTALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVI 556
Query: 560 F----CNSPA 565
C SPA
Sbjct: 557 INEVTCESPA 566
Score = 115 (45.5 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 45/181 (24%), Positives = 74/181 (40%)
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
++V + S V P+ S S + ++ C TNISD + S + L LT N
Sbjct: 331 IMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSP-KKLYLTGN 389
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
LQ++ L + + L+ L +G N ++++ G F L+ L+RL + G N V A
Sbjct: 390 YLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNG--NYLEVLYPAMF 447
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 535
D I+ L NL L L N S +++ L +++
Sbjct: 448 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRN 507
Query: 536 N 536
N
Sbjct: 508 N 508
Score = 112 (44.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L+L+ N L + F+ L +G N + GAF+GL L L L L +
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N + +I SKL +L+ L + N L + F+ + L
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTH 185
Query: 264 LEITG 268
L++ G
Sbjct: 186 LDLRG 190
Score = 107 (42.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 38/143 (26%), Positives = 60/143 (41%)
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
TNISD + S + L LT N LQ++ L + + L+ L +G N ++++ G F L+
Sbjct: 369 TNISDLQPKPTSP-KKLYLTGNYLQTVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLT 427
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L+RL + G N V A D I+ L NL L L N
Sbjct: 428 SLRRLYLNG--NYLEVLYPAMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNN 485
Query: 320 AFTSFSESMLAWPELRTIDIAEN 342
S +++ L +++ N
Sbjct: 486 LLRSLPDNIFGGTALTRLNLRNN 508
Score = 79 (32.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 83 IPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
I G F + L L LN+NK + + S ++ N IS I+ F L
Sbjct: 101 IRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQA-DYNYISAIEAGAFSKLNK 159
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA-DGAFNGLGRLSALDL 194
L++L L+DN L S+P+ F ++ +L L + N + G +G + + L
Sbjct: 160 LKVLILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQL 213
Score = 63 (27.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG-FEPQEKLVELQLNHNKHFPQQ 108
L+L+ N + ++ S + ++ L H+DL ++P G E ++E+QL N P
Sbjct: 163 LILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKVMPFAGVLEHIGGIMEIQLEEN---PWN 219
Query: 109 IVCSII 114
C ++
Sbjct: 220 CTCDLL 225
Score = 50 (22.7 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN 102
+++RL L+ N+++ + + L SL+++ + I G F KL L LN N
Sbjct: 111 TLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDN 168
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 205 (77.2 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 76/272 (27%), Positives = 113/272 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 85 ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 144
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL I L+ L L +
Sbjct: 145 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
++ E L L L+++G ++L+ +R G+F IE
Sbjct: 205 AM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF-QGLMHLQKLWMIQSQIQVIER 260
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L +NL N T + P L I + NP C C+ILWL ++M
Sbjct: 261 NAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIHLHHNPWNCNCDILWLSWWIKDM 319
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
CN+P LK + + L C
Sbjct: 320 APSNTACCARCNTPPNLKGRYIGELDQNYFTC 351
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 71/233 (30%), Positives = 104/233 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NL E + +I +S ++ L LS N I+T++ A +L ++
Sbjct: 71 PDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 130
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G F KL EL L +N + P I S RR+++ R+S I +
Sbjct: 131 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 190
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
FEGL+ LR L L LR +P + L L EL + N + + G+F GL L L
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ + + I NAF L L + L N L +P + L LE + + N
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 193 (73.0 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 136 EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ T R+L L +NQ++ + SF +L L L++ N T+ GAFNGL L+ L+L
Sbjct: 72 DGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAG 253
LT I + AF LS L+ L L +N ++SIP+ +++ L L++G+ S + G
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 254 CFKGLSYLKRLEITGASNLTRV 275
F+GLS L+ L + NL +
Sbjct: 192 AFEGLSNLRYLNLA-MCNLREI 212
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/246 (23%), Positives = 103/246 (41%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
++ L+ +P +S TRL L + +N +++ FK L +L+ L+++ +++ +
Sbjct: 60 VICVRKNLREVPDG-ISTNTRL--LNLHENQIQIIKVNSFKHLRHLEILQLS-RNHIRTI 115
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA V L L L L+ N S S + P L
Sbjct: 116 EIGAF-NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSL 174
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
R +D+ E + + R + CN LI L DL +G L+
Sbjct: 175 RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDL--SGNHLS 232
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I +F+GL L+ L + +++Q I L L E+ + N ++L F L +
Sbjct: 233 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Query: 455 LKRLEI 460
L+R+ +
Sbjct: 293 LERIHL 298
Score = 138 (53.6 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 56/220 (25%), Positives = 88/220 (40%)
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD- 414
L NT +F N + + + LS ++L + +I AF + LR L L +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL I L+ L L + ++ E L L L+++G ++L+ +R G+F
Sbjct: 183 KRLSYISEGAFEGLSNLRYLNLAM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF 239
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTID 532
+IE +A L +L +NL N T + P L I
Sbjct: 240 -QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIH 297
Query: 533 IAENPIECGCNILWL----REMLVRRNTSAVFCNSPAPLK 568
+ NP C C+ILWL ++M CN+P LK
Sbjct: 298 LHHNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLK 337
Score = 131 (51.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 57/237 (24%), Positives = 103/237 (43%)
Query: 35 NLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVD---LSHTTWLIIPIGGFEPQ 91
NL +P + + + L L N+I+ + + + L+H++ LS I IG F
Sbjct: 66 NLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 92 EKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDD-N 149
L L+L N+ + + E++ +N I I F + +LR L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
+L + +F L L L + + + + L +L LDL G L+ I +F+G
Sbjct: 184 RLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L L+ L + +++Q I L L E+ + N ++L F L +L+R+ +
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/191 (24%), Positives = 83/191 (43%)
Query: 90 PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
PQ+ ++ + N P +V +++ + + + G R C +++ + N
Sbjct: 9 PQQIMIGPRFNRALFDPLLVV--LLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKN 66
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
LR VP +L + N + +F L L L L + I AF G
Sbjct: 67 -LREVPDGISTNTRLL---NLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNG 122
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L+ L +L L DNRL +IP L++L+EL + N + + F + L+RL++
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 270 SNLTRVRKGAF 280
L+ + +GAF
Sbjct: 183 KRLSYISEGAF 193
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 205 (77.2 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 76/272 (27%), Positives = 113/272 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 85 ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 144
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL I L+ L L +
Sbjct: 145 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
++ E L L L+++G ++L+ +R G+F IE
Sbjct: 205 AM--CNLREIPNLTPLVKLDELDLSG-NHLSAIRPGSF-QGLMHLQKLWMIQSQIQVIER 260
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L +NL N T + P L I + NP C C+ILWL ++M
Sbjct: 261 NAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIHLHHNPWNCNCDILWLSWWIKDM 319
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
CN+P LK + + L C
Sbjct: 320 APSNTACCARCNTPPNLKGRYIGELDQNYFTC 351
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 71/233 (30%), Positives = 104/233 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NL E + +I +S ++ L LS N I+T++ A +L ++
Sbjct: 71 PDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 130
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G F KL EL L +N + P I S RR+++ R+S I +
Sbjct: 131 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 190
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
FEGL+ LR L L LR +P + L L EL + N + + G+F GL L L
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIP--NLTPLVKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ + + I NAF L L + L N L +P + L LE + + N
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 193 (73.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 136 EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ T R+L L +NQ++ + SF +L L L++ N T+ GAFNGL L+ L+L
Sbjct: 72 DGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAG 253
LT I + AF LS L+ L L +N ++SIP+ +++ L L++G+ S + G
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 254 CFKGLSYLKRLEITGASNLTRV 275
F+GLS L+ L + NL +
Sbjct: 192 AFEGLSNLRYLNLA-MCNLREI 212
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 58/246 (23%), Positives = 103/246 (41%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
++ L+ +P +S TRL L + +N +++ FK L +L+ L+++ +++ +
Sbjct: 60 VICVRKNLREVPDG-ISTNTRL--LNLHENQIQIIKVNSFKHLRHLEILQLS-RNHIRTI 115
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA V L L L L+ N S S + P L
Sbjct: 116 EIGAF-NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSL 174
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
R +D+ E + + R + CN L+ L DL +G L+
Sbjct: 175 RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDL--SGNHLS 232
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I +F+GL L+ L + +++Q I L L E+ + N ++L F L +
Sbjct: 233 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Query: 455 LKRLEI 460
L+R+ +
Sbjct: 293 LERIHL 298
Score = 138 (53.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 56/220 (25%), Positives = 88/220 (40%)
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD- 414
L NT +F N + + + LS ++L + +I AF + LR L L +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL I L+ L L + ++ E L L L+++G ++L+ +R G+F
Sbjct: 183 KRLSYISEGAFEGLSNLRYLNLAM--CNLREIPNLTPLVKLDELDLSG-NHLSAIRPGSF 239
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTID 532
+IE +A L +L +NL N T + P L I
Sbjct: 240 -QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIH 297
Query: 533 IAENPIECGCNILWL----REMLVRRNTSAVFCNSPAPLK 568
+ NP C C+ILWL ++M CN+P LK
Sbjct: 298 LHHNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLK 337
Score = 132 (51.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 57/237 (24%), Positives = 103/237 (43%)
Query: 35 NLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVD---LSHTTWLIIPIGGFEPQ 91
NL +P + + + L L N+I+ + + + L+H++ LS I IG F
Sbjct: 66 NLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 92 EKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDD-N 149
L L+L N+ + + E++ +N I I F + +LR L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
+L + +F L L L + + + + L +L LDL G L+ I +F+G
Sbjct: 184 RLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLVKLDELDLSGNHLSAIRPGSFQG 241
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L L+ L + +++Q I L L E+ + N ++L F L +L+R+ +
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/191 (24%), Positives = 83/191 (43%)
Query: 90 PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
PQ+ ++ + N P +V +++ + + + G R C +++ + N
Sbjct: 9 PQQIMIGPRFNRALFDPLLVV--LLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKN 66
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
LR VP +L + N + +F L L L L + I AF G
Sbjct: 67 -LREVPDGISTNTRLL---NLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNG 122
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L+ L +L L DNRL +IP L++L+EL + N + + F + L+RL++
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 270 SNLTRVRKGAF 280
L+ + +GAF
Sbjct: 183 KRLSYISEGAF 193
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 205 (77.2 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 76/272 (27%), Positives = 113/272 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 85 ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 144
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL I L+ L L +
Sbjct: 145 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
++ E L L L+++G ++L+ +R G+F IE
Sbjct: 205 AM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF-QGLMHLQKLWMIQSQIQVIER 260
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L +NL N T + P L I + NP C C+ILWL ++M
Sbjct: 261 NAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIHLHHNPWNCNCDILWLSWWIKDM 319
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
CN+P LK + + L C
Sbjct: 320 APSNTACCARCNTPPNLKGRYIGELDQNYFTC 351
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 71/233 (30%), Positives = 104/233 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NL E + +I +S ++ L LS N I+T++ A +L ++
Sbjct: 71 PDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 130
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G F KL EL L +N + P I S RR+++ R+S I +
Sbjct: 131 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 190
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
FEGL+ LR L L LR +P + L L EL + N + + G+F GL L L
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ + + I NAF L L + L N L +P + L LE + + N
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 193 (73.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 136 EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ T R+L L +NQ++ + SF +L L L++ N T+ GAFNGL L+ L+L
Sbjct: 72 DGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAG 253
LT I + AF LS L+ L L +N ++SIP+ +++ L L++G+ S + G
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 254 CFKGLSYLKRLEITGASNLTRV 275
F+GLS L+ L + NL +
Sbjct: 192 AFEGLSNLRYLNLA-MCNLREI 212
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/246 (23%), Positives = 103/246 (41%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
++ L+ +P +S TRL L + +N +++ FK L +L+ L+++ +++ +
Sbjct: 60 VICVRKNLREVPDG-ISTNTRL--LNLHENQIQIIKVNSFKHLRHLEILQLS-RNHIRTI 115
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA V L L L L+ N S S + P L
Sbjct: 116 EIGAF-NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSL 174
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
R +D+ E + + R + CN LI L DL +G L+
Sbjct: 175 RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDL--SGNHLS 232
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I +F+GL L+ L + +++Q I L L E+ + N ++L F L +
Sbjct: 233 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Query: 455 LKRLEI 460
L+R+ +
Sbjct: 293 LERIHL 298
Score = 138 (53.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 56/220 (25%), Positives = 88/220 (40%)
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD- 414
L NT +F N + + + LS ++L + +I AF + LR L L +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL I L+ L L + ++ E L L L+++G ++L+ +R G+F
Sbjct: 183 KRLSYISEGAFEGLSNLRYLNLAM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF 239
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTID 532
+IE +A L +L +NL N T + P L I
Sbjct: 240 -QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIH 297
Query: 533 IAENPIECGCNILWL----REMLVRRNTSAVFCNSPAPLK 568
+ NP C C+ILWL ++M CN+P LK
Sbjct: 298 LHHNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLK 337
Score = 131 (51.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 57/237 (24%), Positives = 103/237 (43%)
Query: 35 NLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVD---LSHTTWLIIPIGGFEPQ 91
NL +P + + + L L N+I+ + + + L+H++ LS I IG F
Sbjct: 66 NLREVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 92 EKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDD-N 149
L L+L N+ + + E++ +N I I F + +LR L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
+L + +F L L L + + + + L +L LDL G L+ I +F+G
Sbjct: 184 RLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L L+ L + +++Q I L L E+ + N ++L F L +L+R+ +
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/191 (24%), Positives = 83/191 (43%)
Query: 90 PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
PQ+ ++ + N P +V +++ + + + G R C +++ + N
Sbjct: 9 PQQIMIGPRFNRALFDPLLVV--LLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKN 66
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
LR VP +L + N + +F L L L L + I AF G
Sbjct: 67 -LREVPDGISTNTRLL---NLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNG 122
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L+ L +L L DNRL +IP L++L+EL + N + + F + L+RL++
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 270 SNLTRVRKGAF 280
L+ + +GAF
Sbjct: 183 KRLSYISEGAF 193
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 205 (77.2 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 76/272 (27%), Positives = 113/272 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I I F+ L L IL L N +R++ +F L L L + N TT+ +GAF
Sbjct: 85 ENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 144
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + LR L L + RL I L+ L L +
Sbjct: 145 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 204
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
++ E L L L+++G ++L+ +R G+F IE
Sbjct: 205 AM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF-QGLMHLQKLWMIQSQIQVIER 260
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A L +L +NL N T + P L I + NP C C+ILWL ++M
Sbjct: 261 NAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIHLHHNPWNCNCDILWLSWWIKDM 319
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
CN+P LK + + L C
Sbjct: 320 APSNTACCARCNTPPNLKGRYIGELDQNYFTC 351
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 71/233 (30%), Positives = 104/233 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVD 74
P ST NL E + +I +S ++ L LS N I+T++ A +L ++
Sbjct: 71 PDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLE 130
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQ 132
L IP G F KL EL L +N + P I S RR+++ R+S I +
Sbjct: 131 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 190
Query: 133 ACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
FEGL+ LR L L LR +P + L L EL + N + + G+F GL L L
Sbjct: 191 GAFEGLSNLRYLNLAMCNLREIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 248
Query: 193 DLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
+ + + I NAF L L + L N L +P + L LE + + N
Sbjct: 249 WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 301
Score = 193 (73.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 136 EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ T R+L L +NQ++ + SF +L L L++ N T+ GAFNGL L+ L+L
Sbjct: 72 DGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 131
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEAG 253
LT I + AF LS L+ L L +N ++SIP+ +++ L L++G+ S + G
Sbjct: 132 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG 191
Query: 254 CFKGLSYLKRLEITGASNLTRV 275
F+GLS L+ L + NL +
Sbjct: 192 AFEGLSNLRYLNLA-MCNLREI 212
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 59/246 (23%), Positives = 103/246 (41%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
++ L+ +P +S TRL L + +N +++ FK L +L+ L+++ +++ +
Sbjct: 60 VICVRKNLRDVPDG-ISTNTRL--LNLHENQIQIIKVNSFKHLRHLEILQLS-RNHIRTI 115
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA V L L L L+ N S S + P L
Sbjct: 116 EIGAF-NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSL 174
Query: 335 RTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
R +D+ E + + R + CN LI L DL +G L+
Sbjct: 175 RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDL--SGNHLS 232
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
I +F+GL L+ L + +++Q I L L E+ + N ++L F L +
Sbjct: 233 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 292
Query: 455 LKRLEI 460
L+R+ +
Sbjct: 293 LERIHL 298
Score = 138 (53.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 56/220 (25%), Positives = 88/220 (40%)
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD- 414
L NT +F N + + + LS ++L + +I AF + LR L L +
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
RL I L+ L L + ++ E L L L+++G ++L+ +R G+F
Sbjct: 183 KRLSYISEGAFEGLSNLRYLNLAM--CNLREIPNLTPLIKLDELDLSG-NHLSAIRPGSF 239
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTID 532
+IE +A L +L +NL N T + P L I
Sbjct: 240 -QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT-PLHHLERIH 297
Query: 533 IAENPIECGCNILWL----REMLVRRNTSAVFCNSPAPLK 568
+ NP C C+ILWL ++M CN+P LK
Sbjct: 298 LHHNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLK 337
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/191 (24%), Positives = 83/191 (43%)
Query: 90 PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
PQ+ ++ + N P +V +++ + + + G R C +++ + N
Sbjct: 9 PQQIMIGPRFNRALFDPLLVV--LLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVRKN 66
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
LR VP +L + N + +F L L L L + I AF G
Sbjct: 67 -LRDVPDGISTNTRLL---NLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNG 122
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L+ L +L L DNRL +IP L++L+EL + N + + F + L+RL++
Sbjct: 123 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 182
Query: 270 SNLTRVRKGAF 280
L+ + +GAF
Sbjct: 183 KRLSYISEGAF 193
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 57/237 (24%), Positives = 103/237 (43%)
Query: 35 NLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVD---LSHTTWLIIPIGGFEPQ 91
NL +P + + + L L N+I+ + + + L+H++ LS I IG F
Sbjct: 66 NLRDVPDGISTNTRLLNLHENQIQIIK--VNSFKHLRHLEILQLSRNHIRTIEIGAFNGL 123
Query: 92 EKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDD-N 149
L L+L N+ + + E++ +N I I F + +LR L L +
Sbjct: 124 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 183
Query: 150 QLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
+L + +F L L L + + + + L +L LDL G L+ I +F+G
Sbjct: 184 RLSYISEGAFEGLSNLRYLNLAMCNLREIPN--LTPLIKLDELDLSGNHLSAIRPGSFQG 241
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
L L+ L + +++Q I L L E+ + N ++L F L +L+R+ +
Sbjct: 242 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 298
>UNIPROTKB|F1SH46 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:IAPYQTR
EMBL:CU466936 Ensembl:ENSSSCT00000012847 Uniprot:F1SH46
Length = 979
Score = 142 (55.0 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 40/125 (32%), Positives = 57/125 (45%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N +R + T SF++L + +G N + GAFNGL L L L L
Sbjct: 83 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFR 142
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F GL L L N ++ I + L++L L + N ML FK +S L
Sbjct: 143 NETFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVS-LTH 201
Query: 264 LEITG 268
L++ G
Sbjct: 202 LDLRG 206
Score = 141 (54.7 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 60/212 (28%), Positives = 94/212 (44%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N + I F GL L+ LYL +N+L +F+ L L L+ NV + GA
Sbjct: 110 GNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNETFLGLESLEYLQADYNVIKRIESGA 169
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK-QLSKLTR-LEEL 240
F L +L L L + + N F+ +S L L L NRL+ + + L + R L EL
Sbjct: 170 FRNLSKLRVLILNDNLIPMLPTNLFKAVS-LTHLDLRGNRLKVLFYRGMLDHIGRSLMEL 228
Query: 241 EIGQNGFSML-EAGCFKGLSYLKRLEITG-ASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
++ +N ++ E K S+L+R+ T ++T F
Sbjct: 229 QLEENPWNCTCEIVQLK--SWLERIPYTALVGDITCETPFHFHGKDLREIRKTELCPLLS 286
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
E A +G+P+L + KENA+ + SML+
Sbjct: 287 DSEVEASLGIPHLS--SGKENAWPTKPSSMLS 316
Score = 123 (48.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I +I ++ F ++L +L+L +N++ V +FI L L L + N L G F
Sbjct: 419 NLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFR 478
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L + I AF + L+ L L +N L+++PT + T L L + +
Sbjct: 479 GLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAG-TSLARLNLRK 537
Query: 245 NGFSMLE-AGCFKGLSYLKRLEI 266
N F L AG + L+ + ++++
Sbjct: 538 NYFLYLPVAGVLEHLNAIVQIDL 560
Score = 122 (48.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 37/123 (30%), Positives = 53/123 (43%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N ++ + F L L +G N + + DGAF L L +L L G + ++
Sbjct: 414 LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLT 473
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
FRGL L L N ++ I S + L+ L + N L F G S L R
Sbjct: 474 PGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTS-LAR 532
Query: 264 LEI 266
L +
Sbjct: 533 LNL 535
Score = 117 (46.2 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 58/245 (23%), Positives = 99/245 (40%)
Query: 343 PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
P C CN L + ++ + N N+ + L + L +A+ L + + I + F
Sbjct: 375 PTGCTCN-LHINDLGLTVNCKERGFNNISELLPRPL---NAKKLYLSSNLIQKIYRSDFW 430
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
S L L L +NR+ + L L+ L + N L G F+GL L L
Sbjct: 431 NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFE- 489
Query: 463 ASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSES 521
N+ R ++ AF+ + DA G +L LNL++N F +
Sbjct: 490 -FNVIREIQPAAFS-LMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVA 546
Query: 522 MLA--WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISL 575
+ + ID+ ENP +C C+++ W+ + V C SP L ++ + ++
Sbjct: 547 GVLEHLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHRDVRTI 606
Query: 576 SAEDL 580
E L
Sbjct: 607 ELEVL 611
Score = 53 (23.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ--EKLVELQLNHNKHFPQ 107
L+L+ N I + + + +SL H+DL ++ G L+ELQL N P
Sbjct: 179 LILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVLFYRGMLDHIGRSLMELQLEEN---PW 235
Query: 108 QIVCSII 114
C I+
Sbjct: 236 NCTCEIV 242
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 204 (76.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 96/342 (28%), Positives = 140/342 (40%)
Query: 106 PQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA-LRILYLDDNQLRSVPTPSFIYLGM 164
P + CS S R V G+ R++ I EG+ A R+L L N++R + L
Sbjct: 25 PARCECSA-STRTVAC-GRRRLTAIP----EGIPAETRMLELSRNRIRCLNPGDLASLPT 78
Query: 165 LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 224
L EL + NV + GAF L RL L LRG L I F L L L L++N+L
Sbjct: 79 LEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLV 138
Query: 225 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXX 284
+ L L+ LE+G N + F GL L L + NLT + +
Sbjct: 139 ILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERC-NLTSLSPESLGHLR 197
Query: 285 XXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 344
+E+ LP L HL + +N + E +A LR +++ I
Sbjct: 198 GLGALRLRHLAIAA-LEDQNFQKLPGLSHLEI-DN-WPLLEE--VAPGSLRGLNLTSLSI 252
Query: 345 ECGCNILWLREMLVRRNTSAVFCN-SPAPLK------YKSLISLSAEDLGCAGAGLTNIS 397
NI + +R+ N S P+ ++ L+ L +L AGA L I
Sbjct: 253 T-HTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRL--RELHLAGALLAVIE 309
Query: 398 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
AF GL +R L L+DN L ++ + LE L + N
Sbjct: 310 PQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGN 351
Score = 183 (69.5 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 92/376 (24%), Positives = 158/376 (42%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R++ RL +IP + + TR+ LE+ +N L G L L+ L++ + +
Sbjct: 35 RTVACGRRRLTAIP-EGIPAETRM--LELSRNRIRCLNPGDLASLPTLEELDLNH-NVIA 90
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE 333
V GAFA+ I G L +L L+L EN + ++ +
Sbjct: 91 HVEPGAFANLPRLRVLRLRGNQLKL-IPPGVFTHLDSLTLLDLSENKLVILLD--FSFQD 147
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLG-CAGAG 392
LR++ +E G N L + RR + + + L+ +L SLS E LG G G
Sbjct: 148 LRSLQ----RLEVGDNDL---VFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGLG 200
Query: 393 --------LTNISDNAFRGLSGLRSLVLTDN--RLQSIPTKQLSKLTRLEELEIGQNGFS 442
+ + D F+ L GL L + DN L+ + L L L L I +
Sbjct: 201 ALRLRHLAIAALEDQNFQKLPGLSHLEI-DNWPLLEEVAPGSLRGLN-LTSLSITHTNIT 258
Query: 443 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGL 502
+ A + ++L L ++ + ++ V +G+F D +IE A VGL
Sbjct: 259 AVPAAALRQQAHLTCLNLSH-NPISMVPRGSFRDLVRLRELHLAGALLA-VIEPQAFVGL 316
Query: 503 PNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAV 559
+ LNL +N ++ E+ + L T+ + NP+ C C +LW+ R + +
Sbjct: 317 RQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLACDCRLLWIVQRRKTLNFDGRLP 376
Query: 560 FCNSPAPLKYKSLISL 575
C +PA ++ +L +L
Sbjct: 377 ACATPAEVRGDALHNL 392
Score = 170 (64.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 56/193 (29%), Positives = 84/193 (43%)
Query: 87 GFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
G + +++EL N + + S+ + +++ N I+ ++ F L LR+L L
Sbjct: 50 GIPAETRMLELSRNRIRCLNPGDLASLPTLEELDL-NHNVIAHVEPGAFANLPRLRVLRL 108
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
NQL+ +P F +L L L + N L D +F L L L++ L IS A
Sbjct: 109 RGNQLKLIPPGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRA 168
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F GL GL L L L S+ + L L L L + + LE F+ L L LEI
Sbjct: 169 FAGLLGLAELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEI 228
Query: 267 TGASNLTRVRKGA 279
L V G+
Sbjct: 229 DNWPLLEEVAPGS 241
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 69/234 (29%), Positives = 106/234 (45%)
Query: 43 SNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNH 101
S P+++ L L+ N I V+ A L+ + L +IP G F + L L L+
Sbjct: 75 SLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSE 134
Query: 102 NK-----HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPT 156
NK F Q + S+ +R+E+ G N + I + F GL L L L+ L S+
Sbjct: 135 NKLVILLDFSFQDLRSL---QRLEV-GDNDLVFISRRAFAGLLGLAELTLERCNLTSLSP 190
Query: 157 PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN-ISDNAFRGLSGLRS 215
S +L L LR+ L D F L LS L++ L ++ + RGL+ L S
Sbjct: 191 ESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDNWPLLEEVAPGSLRGLN-LTS 249
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L +T + ++P L + L L + N SM+ G F+ L L+ L + GA
Sbjct: 250 LSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGA 303
Score = 142 (55.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 79/306 (25%), Positives = 121/306 (39%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N L G L L LDL + ++ AF L LR L L N+L+ IP
Sbjct: 58 LELSRNRIRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIP 117
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 287
+ L L L++ +N +L F+ L L+RLE+ G ++L + + AFA
Sbjct: 118 PGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEV-GDNDLVFISRRAFAGLLGLA 176
Query: 288 XXXXXXXXXXXXIEE--GALVGLP--NLYHLNLKENAFTSFSE----SMLA---WPELRT 336
E G L GL L HL + +F + S L WP L
Sbjct: 177 ELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDNWPLLE- 235
Query: 337 IDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI 396
++A + G N+ L + N +AV + + + ++LS + G
Sbjct: 236 -EVAPGSLR-GLNLTSLS--ITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRG---- 287
Query: 397 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 456
+FR L LR L L L I + L ++ L + N S LE F ++ L+
Sbjct: 288 ---SFRDLVRLRELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLE 344
Query: 457 RLEITG 462
L + G
Sbjct: 345 TLRVDG 350
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 202 (76.2 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 75/269 (27%), Positives = 121/269 (44%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSN---PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVD 74
P F S NL + +L + + PS++ L L N I + A +L +
Sbjct: 53 PKEFPCEASSINLDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELK 112
Query: 75 LSHTTWL-IIPIGGFEPQEKLVELQLNHNKHF--PQQIVCSIISPRRVEIFGQNRISRID 131
++H ++ + F ++LV L L+ F P +I I+ + + F QN R+
Sbjct: 113 MAHNEYIRYLHTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQITLKELLCF-QNNFRRVP 171
Query: 132 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 191
A G+ L +YL+ N++ +V S + L L L + N + D AF L RL
Sbjct: 172 GA-LRGMENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLEN 230
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L ++ AF+GLS L+ L L N L ++ S L LE L + +N S +E
Sbjct: 231 FYLNDNLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIE 290
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAF 280
G F+ L+ L L + ++NLT + F
Sbjct: 291 DGSFENLTSLITLHLN-SNNLTSLPFSVF 318
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 77/277 (27%), Positives = 121/277 (43%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSF--SESMLAWPELRTIDIAE----N-PIECGCNILW 352
I GA GLPNL L + N + + + + A L +D+++ N P +
Sbjct: 97 ITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSDCNLFNMPDRIFLEQIT 156
Query: 353 LREMLVRRNTSAVFCNSPAPLK-YKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLV 411
L+E+L +N F P L+ ++L + E + ++ N+ GL+ L+ L
Sbjct: 157 LKELLCFQNN---FRRVPGALRGMENLTHVYLER-----NKIEAVAYNSLLGLTSLKYLN 208
Query: 412 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 471
L +NR+ I + L RLE + N L FKGLS LK L + G + LT V K
Sbjct: 209 LQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNL-GGNLLTNVSK 267
Query: 472 GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPE--LR 529
F+D I E+ + L +L L+L N TS S+ P +
Sbjct: 268 TWFSDLVELEVLYLDRNRLSYI-EDGSFENLTSLITLHLNSNNLTSLPFSVFQ-PIYFIG 325
Query: 530 TIDIAENPIECGCNILWLREMLVR-RNTSAVFCNSPA 565
+ + NP EC C++ WLRE + + + C SP+
Sbjct: 326 RLYLFRNPWECTCDLEWLREWMESYKLVRDIPCASPS 362
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 73/276 (26%), Positives = 115/276 (41%)
Query: 190 SALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF-S 248
S+++L L +S+ AF L L++L L N + I L L EL++ N +
Sbjct: 61 SSINLDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIR 120
Query: 249 MLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
L F L L RL+++ NL + F + GAL G+
Sbjct: 121 YLHTRTFTALKRLVRLDLSDC-NLFNMPDRIFLEQITLKELLCFQNNFRRV--PGALRGM 177
Query: 309 PNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPI-----ECGCNILWLREMLVRRNT 362
NL H+ L+ N + + S+L L+ +++ EN I E +++ L + N
Sbjct: 178 ENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDN- 236
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 422
+ + P +K L +L +LG G LTN+S F L L L L NRL I
Sbjct: 237 --LLVDLPQQA-FKGLSNLKMLNLG--GNLLTNVSKTWFSDLVELEVLYLDRNRLSYIED 291
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
LT L L + N + L F+ + ++ RL
Sbjct: 292 GSFENLTSLITLHLNSNNLTSLPFSVFQPIYFIGRL 327
Score = 154 (59.3 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 44/141 (31%), Positives = 64/141 (45%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N+I + GLT+L+ L L +N++ + +F L L + N+ L AF
Sbjct: 187 RNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAF 246
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L+L G LTN+S F L L L L NRL I LT L L +
Sbjct: 247 KGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLN 306
Query: 244 QNGFSMLEAGCFKGLSYLKRL 264
N + L F+ + ++ RL
Sbjct: 307 SNNLTSLPFSVFQPIYFIGRL 327
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 63/261 (24%), Positives = 99/261 (37%)
Query: 215 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
S+ L N L+ + + L L+ L + N S + G FKGL L L++ +
Sbjct: 62 SINLDKNSLKFLSERAFGTLPSLKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRY 121
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPEL 334
+ F + + + L L +N F ++ L
Sbjct: 122 LHTRTFT-ALKRLVRLDLSDCNLFNMPDRIFLEQITLKELLCFQNNFRRVPGALRGMENL 180
Query: 335 RTIDIAENPIEC-GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGL 393
+ + N IE N L L N N +K LI L E+ L
Sbjct: 181 THVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRL--ENFYLNDNLL 238
Query: 394 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 453
++ AF+GLS L+ L L N L ++ S L LE L + +N S +E G F+ L+
Sbjct: 239 VDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLT 298
Query: 454 YLKRLEITGASNLTRVRKGAF 474
L L + ++NLT + F
Sbjct: 299 SLITLHLN-SNNLTSLPFSVF 318
>UNIPROTKB|F1PEB2 [details] [associations]
symbol:TLR8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0045416 "positive regulation of interleukin-8
biosynthetic process" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA] [GO:0007249
"I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0050707 "regulation of cytokine secretion"
evidence=IEA] [GO:0034158 "toll-like receptor 8 signaling pathway"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027175 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
GO:GO:0016021 GO:GO:0003677 GO:GO:0003727 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0051607
GO:GO:0005622 GO:GO:0003725 GO:GO:0071260 GO:GO:0045089
InterPro:IPR025875 Pfam:PF12799 GO:GO:0045416 GO:GO:0007249
GO:GO:0045078 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0045356 CTD:51311 KO:K10170
PANTHER:PTHR24365:SF2 OMA:ELHGNPF EMBL:AAEX03026144
RefSeq:XP_003435496.1 Ensembl:ENSCAFT00000036159 GeneID:100684828
KEGG:cfa:100684828 Uniprot:F1PEB2
Length = 1038
Score = 136 (52.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 62/223 (27%), Positives = 102/223 (45%)
Query: 45 PSIQRLVLSTNRIK-TVDSAIPIYLSLQHVDLSHTTWLIIPIG-----GF-EPQEKLVEL 97
P I+ L L+ NR+ D+A+ L+ +DLS+ G GF + +L L
Sbjct: 528 PHIKYLDLTNNRLDFDDDNALSDLPELEVLDLSYNAHYFRIAGVTHRLGFIQNLTQLKVL 587
Query: 98 QLNHNKHFP--QQIVCSIISPRRVEIFGQNRISRIDQA-------CFEGLTALRILYLDD 148
L+HN + +Q + S+ S + +F NR+ + A F L L L L
Sbjct: 588 NLSHNSIYTLTEQDLRSV-SLEEL-VFSGNRLDILWNAEGDKYWKIFTRLRNLTRLDLSL 645
Query: 149 NQLRSVPTPSFIYLGM-LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAF 207
N LR +P +F+ L L +L + N RL LDL G L++I+++
Sbjct: 646 NNLRRIPNEAFLNLPQSLTQLYIKNNALNFFNWTLLQEFPRLQVLDLSGNRLSSITNSLS 705
Query: 208 RGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
+ S L++L+L NR+ +P LS+ + L L++ N M+
Sbjct: 706 KFTSSLQTLLLHRNRISHLPASFLSEASSLIHLDLSSNLLKMI 748
Score = 133 (51.9 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 68/291 (23%), Positives = 123/291 (42%)
Query: 308 LPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENP----IECGCNILWLREMLVRRNT 362
+P++ +L+L N ++ L+ PEL +D++ N I + L + L +
Sbjct: 527 VPHIKYLDLTNNRLDFDDDNALSDLPELEVLDLSYNAHYFRIAGVTHRLGFIQNLTQLKV 586
Query: 363 SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNI----SDNAFRGLSGLRSLVLTD---N 415
+ NS L + L S+S E+L +G L + D ++ + LR+L D N
Sbjct: 587 LNLSHNSIYTLTEQDLRSVSLEELVFSGNRLDILWNAEGDKYWKIFTRLRNLTRLDLSLN 646
Query: 416 RLQSIPTKQLSKLTR-LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L+ IP + L + L +L I N + + L+ L+++G + L+ + +
Sbjct: 647 NLRRIPNEAFLNLPQSLTQLYIKNNALNFFNWTLLQEFPRLQVLDLSG-NRLSSITN-SL 704
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP---ELRTI 531
+ + L +L HL+L N ++S L L +
Sbjct: 705 SKFTSSLQTLLLHRNRISHLPASFLSEASSLIHLDLSSNLLKMINKSTLQTKTNTSLAIL 764
Query: 532 DIAENPIECGCNI----LWLREML---VRRNTSAVFCNSPAPLKYKSLISL 575
++ NP +C C+I W+ E L + R T V C+SP + KS++SL
Sbjct: 765 ELGRNPFDCTCDIGDFRRWMDENLNVTIPRLTD-VICSSPGDQRGKSIVSL 814
Score = 126 (49.4 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 63/222 (28%), Positives = 93/222 (41%)
Query: 56 RIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIIS 115
R++ V + Y+++ +DLS I F + L ++ LNHN + PQ + +
Sbjct: 50 RLQEVPQTVGKYVTV--LDLSDNYITHITNESFHGLQNLTKINLNHNAN-PQHLS---EN 103
Query: 116 PRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVF 175
P G N I F L L L L+DNQL +P G L EL + N
Sbjct: 104 PDNKN--GMN----ITDGAFLNLQNLNQLLLEDNQLYQIPAG---LPGSLKELSLIQNNI 154
Query: 176 TTLADGAFNGLGRLSALDLR-----GAGLTN----ISDNAFRGLSGLRSLVLTDNRLQSI 226
+ +GL L L L G N I D F L+ L L L+ N+L +
Sbjct: 155 IWVTKKNTSGLTNLERLYLSWNCYFGNNCNNKTFNIEDGTFESLTNLEVLSLSFNKLVHV 214
Query: 227 PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
P K S L +EL + ++ FKGL L+ L+++G
Sbjct: 215 PPKLPSSL---KELYLSNAKIKIISQEDFKGLRNLRVLDLSG 253
Score = 95 (38.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 66/248 (26%), Positives = 100/248 (40%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG 87
+CN + N++ S +++ L LS N++ V +P SL+ + LS+ II
Sbjct: 182 NCNNKTFNIEDGTFESLTNLEVLSLSFNKLVHVPPKLPS--SLKELYLSNAKIKIISQED 239
Query: 88 FEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
F+ L L L+ N + F C+ P G I +I F+ LT LR L
Sbjct: 240 FKGLRNLRVLDLSGNCPRCFNAPFPCT---PCE----GGASI-QIHPLAFQTLTELRYLN 291
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT-LADGAF-NGLGRLSALDL-------RG 196
L LR +P F + L L + N +A G F L L LDL +
Sbjct: 292 LSSTSLRKIPATWFDNMRNLKVLHLEFNYLVDEIASGEFLTKLPVLEILDLSYNYVKAKY 351
Query: 197 AGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT---KQLSKLTRLEELEIGQNGFSMLEAG 253
NIS N F L L++L L Q + + L L+ L+ + +G N +
Sbjct: 352 PKYINISHN-FSSLKLLQALHLRGYVFQELRAGDFEPLMGLSNLKTINLGVNFIKQINFT 410
Query: 254 CFKGLSYL 261
F+ L
Sbjct: 411 LFQNFPNL 418
Score = 85 (35.0 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 47/163 (28%), Positives = 66/163 (40%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N+ I+ FE LT L +L L N+L VP P L EL + ++ F
Sbjct: 185 NKTFNIEDGTFESLTNLEVLSLSFNKLVHVP-PKLP--SSLKELYLSNAKIKIISQEDFK 241
Query: 185 GLGRLSALDLRG----------------AGLT-NISDNAFRGLSGLRSLVLTDNRLQSIP 227
GL L LDL G G + I AF+ L+ LR L L+ L+ IP
Sbjct: 242 GLRNLRVLDLSGNCPRCFNAPFPCTPCEGGASIQIHPLAFQTLTELRYLNLSSTSLRKIP 301
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
+ L+ L + N + + E + L+ L LEI S
Sbjct: 302 ATWFDNMRNLKVLHLEFN-YLVDEIASGEFLTKLPVLEILDLS 343
Score = 70 (29.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 39/168 (23%), Positives = 73/168 (43%)
Query: 127 ISRIDQACFEGLTALRILYLDDNQL-RSVPTPSFIY-LGMLAELRVGLNV-------FTT 177
+ +I F+ + L++L+L+ N L + + F+ L +L L + N +
Sbjct: 297 LRKIPATWFDNMRNLKVLHLEFNYLVDEIASGEFLTKLPVLEILDLSYNYVKAKYPKYIN 356
Query: 178 LADGAFNGLGRLSALDLRGAGLTNISDNAFR---GLSGLRSLVLTDNRLQSIPTKQLSKL 234
++ F+ L L AL LRG + F GLS L+++ L N ++ I
Sbjct: 357 ISHN-FSSLKLLQALHLRGYVFQELRAGDFEPLMGLSNLKTINLGVNFIKQINFTLFQNF 415
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L + + +N S L ++ +++ E+ G+S+ V K AD
Sbjct: 416 PNLSIIYLSENRISPL-------VNDIRQNEVNGSSSQRHVLKPRSAD 456
Score = 50 (22.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH 104
P ++ L LS N +K + P Y+++ H S + + G+ QE L
Sbjct: 335 PVLEILDLSYNYVK---AKYPKYINISHNFSSLKLLQALHLRGYVFQE------LRAGDF 385
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQL 151
P + + + + + + G N I +I+ F+ L I+YL +N++
Sbjct: 386 EP---LMGLSNLKTINL-GVNFIKQINFTLFQNFPNLSIIYLSENRI 428
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPI 344
L+GL NL +NL N + ++ +P L I ++EN I
Sbjct: 388 LMGLSNLKTINLGVNFIKQINFTLFQNFPNLSIIYLSENRI 428
Score = 45 (20.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
GLS L+++ L N ++ I L + + +N S L ++ +++ E+ G
Sbjct: 390 GLSNLKTINLGVNFIKQINFTLFQNFPNLSIIYLSENRISPL-------VNDIRQNEVNG 442
Query: 463 ASNLTRVRKGAFAD 476
+S+ V K AD
Sbjct: 443 SSSQRHVLKPRSAD 456
>RGD|1302973 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor 1"
species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IEA;ISO]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IMP] [GO:0007567 "parturition"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030198
"extracellular matrix organization" evidence=IEA;ISO] [GO:0042562
"hormone binding" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060427 "lung connective tissue development"
evidence=IEA;ISO] [GO:0060658 "nipple morphogenesis"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 RGD:1302973 GO:GO:0016021 GO:GO:0005886 GO:GO:0030154
GO:GO:0046872 GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
HSSP:P01130 GO:GO:0060427 CTD:59350 HOVERGEN:HBG026354 KO:K04306
GO:GO:0060658 HOGENOM:HOG000049056 OrthoDB:EOG4NGGM1 EMBL:AY509976
IPI:IPI00409992 RefSeq:NP_958820.1 UniGene:Rn.109230
ProteinModelPortal:Q6R6I6 SMR:Q6R6I6 STRING:Q6R6I6
PhosphoSite:Q6R6I6 PRIDE:Q6R6I6 GeneID:295144 KEGG:rno:295144
UCSC:RGD:1302973 InParanoid:Q6R6I6 NextBio:639021
Genevestigator:Q6R6I6 Uniprot:Q6R6I6
Length = 758
Score = 205 (77.2 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 72/273 (26%), Positives = 123/273 (45%)
Query: 11 SKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLS 69
S+C+ P RD + EANL +PS S+ ++ + L N I+T+ ++ Y
Sbjct: 93 SECLVGSVPMHCLCRDLELDCDEANLRAVPSVSS-NVTVMSLQWNFIRTLPPNSFRKYHD 151
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRIS 128
LQ + L + + + F L +L L+HN+ F + V + I N +S
Sbjct: 152 LQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLS 211
Query: 129 RIDQACFEGLTALRILYLDDNQLRSVPT-PSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
RI F GL +L +L L +N L +P P ++ L L N L + F
Sbjct: 212 RISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCN 271
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L+ L +R + +++++AF L L L L N+++++P L L +L I N
Sbjct: 272 NLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPI 331
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+E F L+ LK L + G ++ +++ F
Sbjct: 332 QKIEVNQFDYLAKLKSLSLEGIE-ISNIQQRMF 363
Score = 168 (64.2 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 72/313 (23%), Positives = 122/313 (38%)
Query: 83 IPIGGFEPQEKLVELQLNHNKHFPQQIVC--SIISPRRVEIFGQNRISRIDQACFEGLTA 140
+P F L +L L +NK + + S ++ + NRI+ + FE L
Sbjct: 141 LPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYL-SHNRITFLKPGVFEDLHR 199
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF-NGLGRLSALDLRGAGL 199
L L ++DN L + +F L L L + N T L D + RL LD G +
Sbjct: 200 LEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRI 259
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
N+ + F + L LV+ N++ + + L +L+EL++G N L FK L
Sbjct: 260 HNLRNLTFISCNNLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLK 319
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L +L I+ + + ++ F D I++ L NL H+ K+
Sbjct: 320 ELSQLNIS-YNPIQKIEVNQF-DYLAKLKSLSLEGIEISNIQQRMFRPLINLSHIYFKKF 377
Query: 320 AFTSFSESMLAW-PELRTIDIAENPIECGCN--ILWLREMLVRRNTSAVFCNSPAPLKYK 376
+ ++ + + P I EN + +W+ + V C P
Sbjct: 378 QYCGYAPHVRSCKPNTDGISSLENLLASIIQRVFVWVVSAITCFGNIFVICMRPYIRSEN 437
Query: 377 SLISLSAEDLGCA 389
L ++S L CA
Sbjct: 438 KLHAMSIMSLCCA 450
Score = 148 (57.2 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 56/222 (25%), Positives = 99/222 (44%)
Query: 47 IQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
+Q+L L N+I++V SA SL + LSH + G FE +L L + N H
Sbjct: 152 LQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN-HL 210
Query: 106 PQQIVCSI--ISPRRVEIFGQNRISRI-DQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ + ++ + + N ++R+ D+ + + L L + N++ ++ +FI
Sbjct: 211 SRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISC 270
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N L + AF L +L LDL + N+ N F+ L L L ++ N
Sbjct: 271 NNLTVLVMRKNKINHLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNP 330
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+Q I Q L +L+ L + S ++ F+ L L +
Sbjct: 331 IQKIEVNQFDYLAKLKSLSLEGIEISNIQQRMFRPLINLSHI 372
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 60/254 (23%), Positives = 99/254 (38%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S + + L N ++++P K L++L + N + F+GL L +L ++ +
Sbjct: 126 SNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSAFRGLHSLTKLYLSH-N 184
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
+T ++ G F D I GL +L L L NA T + L
Sbjct: 185 RITFLKPGVFEDLHRLEWLIIEDNHLSR-ISPLTFYGLNSLILLVLMNNALTRLPDKPLC 243
Query: 331 --WPELRTIDIAENPIECGCNILWLR----EMLVRRNTSAVFCNSPAPLKYKSLISLSAE 384
P L +D N I N+ ++ +LV R N A + L L
Sbjct: 244 QHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNEHA---FTHLQKLDEL 300
Query: 385 DLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
DLG + N+ N F+ L L L ++ N +Q I Q L +L+ L + S +
Sbjct: 301 DLG--SNKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDYLAKLKSLSLEGIEISNI 358
Query: 445 EAGCFKGLSYLKRL 458
+ F+ L L +
Sbjct: 359 QQRMFRPLINLSHI 372
Score = 123 (48.4 bits), Expect = 0.00046, P = 0.00046
Identities = 65/263 (24%), Positives = 101/263 (38%)
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
D+ LR+VP+ S + + + N TL +F L L L+ + ++S +A
Sbjct: 114 DEANLRAVPSVS----SNVTVMSLQWNFIRTLPPNSFRKYHDLQKLCLQNNKIRSVSVSA 169
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
FRGL L L L+ NR+ + L RLE L I N S + F GL+ L L +
Sbjct: 170 FRGLHSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVL 229
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE 326
+ LTR+ + + NL L +++N +E
Sbjct: 230 MNNA-LTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHLNE 288
Query: 327 SMLAW-PELRTIDIAENPIE-CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAE 384
+L +D+ N IE NI + L + N S ++ L L +
Sbjct: 289 HAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDYLAKLKS- 347
Query: 385 DLGCAGAGLTNISDNAFRGLSGL 407
L G ++NI FR L L
Sbjct: 348 -LSLEGIEISNIQQRMFRPLINL 369
>WB|WBGene00006366 [details] [associations]
symbol:sym-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009792 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00690000101816
EMBL:Z79598 EMBL:AJ242473 PIR:T19939 RefSeq:NP_510426.1
UniGene:Cel.8136 ProteinModelPortal:G5EFP4 SMR:G5EFP4
EnsemblMetazoa:C44H4.3 GeneID:181555 KEGG:cel:CELE_C44H4.3
CTD:181555 WormBase:C44H4.3 OMA:NMERFWR NextBio:914424
Uniprot:G5EFP4
Length = 680
Score = 204 (76.9 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 77/304 (25%), Positives = 130/304 (42%)
Query: 47 IQRLVLSTNRIKTV-DSAIP-IYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
I++L+LS NRI+ + D A + +Q + LS +P L L L NK
Sbjct: 85 IKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCNKI 144
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLT-ALRILYLDDNQLRSVPTPSFIY 161
+ + ++ S V + G N+I + F + +L+ L LD+N + P+ +
Sbjct: 145 ENITTKAFVNMTSLIDVNL-GCNQICSMAADTFANVKMSLQNLILDNNCMTEFPSKAVRN 203
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
+ L L + N + F L LS L L G ++ I A + L L L +N
Sbjct: 204 MNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNEN 263
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
LQ++ L + +L+ L++ N F+ + F+GL ++ L + ++ ++ V GAFA
Sbjct: 264 NLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLD-SNRISAVAPGAFA 322
Query: 282 DXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIA 340
+ + L G P L ++L N E S P L T+D+A
Sbjct: 323 GTPLLLLWLPNNCLTE--VSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPNLHTLDLA 380
Query: 341 ENPI 344
N I
Sbjct: 381 NNKI 384
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 75/331 (22%), Positives = 131/331 (39%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL-SYLKRLEITGASN 271
+R L L + + + K L R+++L + N + F GL + ++ L ++ +N
Sbjct: 62 VRELALENADIIEVGPKAFKTL-RIKKLILSNNRIEKIHDHAFTGLENVMQELSLS-ENN 119
Query: 272 LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW 331
L V A A I A V + +L +NL N S + A
Sbjct: 120 LKEVPTSALAGLRVLNILSLKCNKIEN-ITTKAFVNMTSLIDVNLGCNQICSMAADTFAN 178
Query: 332 PELRTID-IAENPIECGCNILWLREM--LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
++ + I +N +R M L+ + N+ + +L SLS L
Sbjct: 179 VKMSLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLN- 237
Query: 389 AGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 448
G ++ I A + L L L +N LQ++ L + +L+ L++ N F+ +
Sbjct: 238 -GNNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEM 296
Query: 449 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHL 508
F+GL ++ L + ++ ++ V GAFA + + L G P L +
Sbjct: 297 FEGLESIQHLNLD-SNRISAVAPGAFAGTPLLLLWLPNNCLTE--VSQQTLKGAPFLRMV 353
Query: 509 NLKENAFTSFSE-SMLAWPELRTIDIAENPI 538
+L N E S P L T+D+A N I
Sbjct: 354 SLSNNNIREVHELSFDHLPNLHTLDLANNKI 384
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 80/379 (21%), Positives = 140/379 (36%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR-LEELEIGQNGFSML 250
L L A + + AF+ L ++ L+L++NR++ I + L ++EL + +N +
Sbjct: 65 LALENADIIEVGPKAFKTLR-IKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEV 123
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX-XXXIEEGALVGLP 309
GL L L + + + + AF + + A V +
Sbjct: 124 PTSALAGLRVLNILSLK-CNKIENITTKAFVNMTSLIDVNLGCNQICSMAADTFANVKM- 181
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCN 368
+L +L L N T F S+++ L + I N I N + + + + S + N
Sbjct: 182 SLQNLILDNNCMTEFPSKAVRNMNNLIALHIKYNKI----NAIRQNDFVNLTSLSMLSLN 237
Query: 369 SPAPLKYKSLISLSAEDLGCAGAGLTNIS--DNA-FRGLSGLRSLVLTDNRLQSIPTKQL 425
+ K + +L N+ DN L+ L L+ N I +
Sbjct: 238 GNNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMF 297
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 485
L ++ L + N S + G F G L L + + LT V +
Sbjct: 298 EGLESIQHLNLDSNRISAVAPGAFAGTPLLL-LWLPN-NCLTEVSQQTLKGAPFLRMVSL 355
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC---GC 542
+ E + LPNL+ L+L N S L+ PE + + ENP+ C G
Sbjct: 356 SNNNIREV-HELSFDHLPNLHTLDLANNKIMSLQNKSLSGPENLAVRLQENPVVCVKNGF 414
Query: 543 NILWLREMLVRRNTSAVFC 561
++L E + N + C
Sbjct: 415 HVLNSGEAIWLTNEANTIC 433
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 74/339 (21%), Positives = 134/339 (39%)
Query: 182 AFNGLGRLSALDLRGAGLTNISDNAFRGLSG-LRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
AF L R+ L L + I D+AF GL ++ L L++N L+ +PT L+ L L L
Sbjct: 79 AFKTL-RIKKLILSNNRIEKIHDHAFTGLENVMQELSLSENNLKEVPTSALAGLRVLNIL 137
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
+ N + F ++ L + + G + + + FA+
Sbjct: 138 SLKCNKIENITTKAFVNMTSLIDVNL-GCNQICSMAADTFANVKMSLQNLILDNNCMTEF 196
Query: 301 EEGALVGLPNLYHLNLKENAFTSFSES-MLAWPELRTIDIAEN---PIECGC--NILWLR 354
A+ + NL L++K N + ++ + L + + N I+ G N L
Sbjct: 197 PSKAVRNMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLH 256
Query: 355 EMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
+ + N N ++K L L DL T+I+ F GL ++ L L
Sbjct: 257 YLYLNENNLQTLDNGVLE-QFKQLQVL---DLSFNN--FTDITKEMFEGLESIQHLNLDS 310
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
NR+ ++ + T L L + N + + KG +L+ + ++ +N+ V + +F
Sbjct: 311 NRISAVAPGAFAG-TPLLLLWLPNNCLTEVSQQTLKGAPFLRMVSLSN-NNIREVHELSF 368
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKEN 513
D ++ +L G NL + L+EN
Sbjct: 369 -DHLPNLHTLDLANNKIMSLQNKSLSGPENLA-VRLQEN 405
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 73/321 (22%), Positives = 123/321 (38%)
Query: 229 KQLSKLTRLEELEIGQNGFSMLEAG--CFKGLSYLKRLEITGASNLTRVRKGAFADXXXX 286
++LS T +E E+ ++E G FK L +K+L I + + ++ AF
Sbjct: 52 EKLSTTTTMEVRELALENADIIEVGPKAFKTLR-IKKL-ILSNNRIEKIHDHAFTGLENV 109
Query: 287 XXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIE 345
+ AL GL L L+LK N + + ++ + L +++ N I
Sbjct: 110 MQELSLSENNLKEVPTSALAGLRVLNILSLKCNKIENITTKAFVNMTSLIDVNLGCNQI- 168
Query: 346 CG------CNI-LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISD 398
C N+ + L+ +++ N F S A +LI+L + + I
Sbjct: 169 CSMAADTFANVKMSLQNLILDNNCMTEF-PSKAVRNMNNLIALHIKY-----NKINAIRQ 222
Query: 399 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 458
N F L+ L L L N + I L L L + +N L+ G + L+ L
Sbjct: 223 NDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYLYLNENNLQTLDNGVLEQFKQLQVL 282
Query: 459 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSF 518
+++ +N T + K F + + A G P L L L N T
Sbjct: 283 DLS-FNNFTDITKEMF-EGLESIQHLNLDSNRISAVAPGAFAGTPLLL-LWLPNNCLTEV 339
Query: 519 SESMLAW-PELRTIDIAENPI 538
S+ L P LR + ++ N I
Sbjct: 340 SQQTLKGAPFLRMVSLSNNNI 360
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 202 (76.2 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 80/327 (24%), Positives = 138/327 (42%)
Query: 69 SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNR 126
SL + L+ +P G F+ L L L N+ P+++ + + + + QN
Sbjct: 122 SLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNL-AQNL 180
Query: 127 ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL 186
++++ + F LT+L+ L L +N L +P F LG L EL + N + L F+ L
Sbjct: 181 LAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQL 240
Query: 187 GRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG 246
L L L+ +T++ + F L L L L N L+ +P + L L + N
Sbjct: 241 FCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQ 300
Query: 247 FSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV 306
+ G F LS L+ L ++ + +T + G F D +
Sbjct: 301 LETVAEGTFAHLSNLRSLMLS-YNAITHLPAGIFRDLEELVKLYLGSNNLTA-LHPALFQ 358
Query: 307 GLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAENPIECGCNIL----WLREMLVRRN 361
L L L+L +N T+ E + L + + NP +C C++ WL++ R
Sbjct: 359 NLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLL 418
Query: 362 TSAVFCNSPAPLKYKSLISLSAEDLGC 388
+C PA LK + + +L+ + L C
Sbjct: 419 NIQTYCAGPAYLKGQVVPALNEKQLVC 445
Score = 188 (71.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 70/256 (27%), Positives = 117/256 (45%)
Query: 30 NLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAI--PIYLSLQHVDLSHTTWLIIPIGG 87
N+ EA + + H +++ L L N+++ + + P+ L+ ++L+ +P
Sbjct: 131 NMLEALPEGLFQHL-AALESLHLQGNQLQALPRRLFQPL-THLKTLNLAQNLLAQLPEEL 188
Query: 88 FEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIF-GQNRISRIDQACFEGLTALRIL 144
F P L L+L++N PQ + + S + E+F N IS + F L L L
Sbjct: 189 FHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQ--ELFLDSNNISELPPQVFSQLFCLERL 246
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
+L N + +P F LG L L + N+ L G F L L L L +++
Sbjct: 247 WLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAE 306
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
F LS LRSL+L+ N + +P L L +L +G N + L F+ LS L+ L
Sbjct: 307 GTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELL 366
Query: 265 EITGASNLTRVRKGAF 280
++ + LT + +G F
Sbjct: 367 SLS-KNQLTTLPEGIF 381
Score = 175 (66.7 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 75/307 (24%), Positives = 129/307 (42%)
Query: 121 IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 180
+F ++ + F GL L L + + ++ T F L L +L + N+ L +
Sbjct: 79 VFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEALPE 138
Query: 181 GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
G F L L +L L+G L + F+ L+ L++L L N L +P + LT L+ L
Sbjct: 139 GLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTL 198
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXI 300
++ N S L G F L L+ L + ++N++ + F+ +
Sbjct: 199 KLSNNALSGLPQGVFGKLGSLQELFLD-SNNISELPPQVFSQLFCLERLWLQRNAITH-L 256
Query: 301 EEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIEC---G--CNILWLR 354
L NL L+L+ N + A P L + + N +E G ++ LR
Sbjct: 257 PLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLR 316
Query: 355 EMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
+++ N + PA + ++ L L LG LT + F+ LS L L L+
Sbjct: 317 SLMLSYNA---ITHLPAGI-FRDLEELVKLYLG--SNNLTALHPALFQNLSKLELLSLSK 370
Query: 415 NRLQSIP 421
N+L ++P
Sbjct: 371 NQLTTLP 377
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 88/356 (24%), Positives = 143/356 (40%)
Query: 127 ISRIDQACFEGLTA-LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNG 185
++R Q C G ++ ++ D +L +VP Y + + FTTL AF
Sbjct: 15 LARPAQPCPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETS---FTTLETRAFGS 71
Query: 186 LGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
L+ + L +AF GL L L +T + ++ T S LT L +L + N
Sbjct: 72 NPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFN 131
Query: 246 GFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGAL 305
L G F+ L+ L+ L + G + L + + F EE
Sbjct: 132 MLEALPEGLFQHLAALESLHLQG-NQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEE-LF 189
Query: 306 VGLPNLYHLNLKENAFTSFSESML----AWPEL--RTIDIAENPIECGCNILWLREMLVR 359
L +L L L NA + + + + EL + +I+E P + + L + ++
Sbjct: 190 HPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQ 249
Query: 360 RNTSAVFCNSP-APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
RN S A L + +SL L AGL F L L LT N+L+
Sbjct: 250 RNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGL-------FAHTPCLVGLSLTHNQLE 302
Query: 419 SIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
++ + L+ L L + N + L AG F+ L L +L + G++NLT + F
Sbjct: 303 TVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYL-GSNNLTALHPALF 357
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 87/393 (22%), Positives = 148/393 (37%)
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
T + AF L +V + +L L RLE+LE+ + F L F L+
Sbjct: 62 TTLETRAFGSNPNLTKVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLT 121
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L +L + + L + +G F + L +L LNL +N
Sbjct: 122 SLGKLTLN-FNMLEALPEGLF-QHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQN 179
Query: 320 AFTSFSESML-AWPELRTIDIAENPIEC---GC--NILWLREMLVRRNTSAVFCNSPAPL 373
E + L+T+ ++ N + G + L+E+ + N + P P
Sbjct: 180 LLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISEL---P-PQ 235
Query: 374 KYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 433
+ L L E L +T++ + F L L L L N L+ +P + L
Sbjct: 236 VFSQLFCL--ERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVG 293
Query: 434 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXI 493
L + N + G F LS L+ L ++ + +T + G F D +
Sbjct: 294 LSLTHNQLETVAEGTFAHLSNLRSLMLS-YNAITHLPAGIFRDLEELVKLYLGSNNLTAL 352
Query: 494 IEEDALV-GLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAENPIECGCNIL----WL 547
AL L L L+L +N T+ E + L + + NP +C C++ WL
Sbjct: 353 --HPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWL 410
Query: 548 REMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 580
++ R +C PA LK + + +L+ + L
Sbjct: 411 QQYTDRLLNIQTYCAGPAYLKGQVVPALNEKQL 443
>UNIPROTKB|E1BAW2 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050710 "negative regulation of cytokine secretion"
evidence=IEA] [GO:0046007 "negative regulation of activated T cell
proliferation" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 GO:GO:0010628 InterPro:IPR000372
SMART:SM00013 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 CTD:2615 OMA:CCGNGWL EMBL:DAAA02041103
IPI:IPI00710724 RefSeq:NP_001180004.1 UniGene:Bt.88092
Ensembl:ENSBTAT00000001716 GeneID:615467 KEGG:bta:615467
NextBio:20899631 Uniprot:E1BAW2
Length = 662
Score = 203 (76.5 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 142/554 (25%), Positives = 221/554 (39%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPI--YLSLQHVDLS 76
P R ++ C Q L +PS + I+ L LS N+++++ A+P+ Y +L+H+DLS
Sbjct: 26 PCRKVDKEVWC--QGRGLLQVPSVLSRDIEVLNLSRNQLRSI-LALPLGFYTALRHLDLS 82
Query: 77 HTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSI--ISP----RRVEIFGQNRISRI 130
+ G F+ L L L HN H + + P +++ G + S +
Sbjct: 83 ANEISFLQPGVFQALPHLEHLNLAHN-HLAVGTALNTGGLGPLLHLTSLDLSGNSLYSGL 141
Query: 131 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 190
+ ALR L L +N L + +F+ L L + NV + DGAF L RL
Sbjct: 142 VEQLLGEAPALRTLSLAENSLTRLGRRTFLSTPALERLDLHSNVLMDIEDGAFEALPRLV 201
Query: 191 ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L+L LT ISD F L LR L L+ N +++ T + +L L++ +N +L
Sbjct: 202 HLNLSRNSLTCISD--F-SLQQLRVLDLSCNSIEAFQTAEPRAEYQLAWLDLREN--KLL 256
Query: 251 EAGCFKGLSYLKRLEITGASN-LTRVR----KGAFADXXXXXXXXXXXXXXXXXIEEGAL 305
F LS L RL ASN L R+ +G A+ +
Sbjct: 257 H---FPDLSALPRLIYLNASNNLIRLPAEPPRGG-AEGLHAPSEGWSSLPLSNPSRNTST 312
Query: 306 VGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVRRNTSA 364
L L +L+L N E L LR+++++ N C LR +
Sbjct: 313 QPLSQLLNLDLSYNEIELVPEGFLEPLTSLRSLNLSRN---C------LRAF--EAQPGS 361
Query: 365 VFCNSPAPLKYKSL--ISLSAEDLGCAGAGLTNISDNAFR--------GLSGLRSLVLTD 414
+ C + + + +L + L A LG L + DNA R L+ L+ L L
Sbjct: 362 LPCLTLLDISHNALETLELGARALGSLRTLL--LQDNALRDLPLYTFTSLASLQRLNLQG 419
Query: 415 NRLQSI--PTKQ-------LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 465
NRL P + S ++ L L + N +L+AG F L L+++
Sbjct: 420 NRLSPCGGPAEPGPSGCVAFSGISSLRVLNLADNEMEILQAGAFLHTP-LAELDLSSNPG 478
Query: 466 LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAW 525
L V GA A +++ D L L LNL EN + AW
Sbjct: 479 LD-VAPGALAGLEGSLEVLALQGNGLAVLQVD-LPCFSCLKRLNLAENRLSRLP----AW 532
Query: 526 PE---LRTIDIAEN 536
+ L +D+ N
Sbjct: 533 TQAVSLEVLDLRNN 546
Score = 148 (57.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 96/374 (25%), Positives = 140/374 (37%)
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
+G GL + R + L L+ N+L+SI L T L L++ N S L+ G
Sbjct: 37 QGRGLLQVPSVLSRDIEVLN---LSRNQLRSILALPLGFYTALRHLDLSANEISFLQPGV 93
Query: 255 FKGLSYLKRLEITGASNL---TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F+ L +L+ L + ++L T + G + E L P L
Sbjct: 94 FQALPHLEHLNLAH-NHLAVGTALNTGGLGPLLHLTSLDLSGNSLYSGLVEQLLGEAPAL 152
Query: 312 YHLNLKENAFTSFSE-SMLAWPELRTIDIAEN---PIECGCNILWLREMLVRRNTSAVFC 367
L+L EN+ T + L+ P L +D+ N IE G R LV N S
Sbjct: 153 RTLSLAENSLTRLGRRTFLSTPALERLDLHSNVLMDIEDGAFEALPR--LVHLNLSR--- 207
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
NS + SL L DL C ++ R L L L +N+L P LS
Sbjct: 208 NSLTCISDFSLQQLRVLDLSCNSIEAFQTAEP--RAEYQLAWLDLRENKLLHFP--DLSA 263
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL--TRVRKGAFADXXXXXXXXX 485
L RL L N L A +G + G S+L + +
Sbjct: 264 LPRLIYLN-ASNNLIRLPAEPPRGGAEGLHAPSEGWSSLPLSNPSRNTSTQPLSQLLNLD 322
Query: 486 XXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC---GC 542
++ E L L +L LNL N +F + P L +DI+ N +E G
Sbjct: 323 LSYNEIELVPEGFLEPLTSLRSLNLSRNCLRAFEAQPGSLPCLTLLDISHNALETLELGA 382
Query: 543 NILW-LREMLVRRN 555
L LR +L++ N
Sbjct: 383 RALGSLRTLLLQDN 396
Score = 142 (55.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 106/436 (24%), Positives = 172/436 (39%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P+++ L L+ N + + + +L+ +DL + I G FE +LV L L+ N
Sbjct: 150 PALRTLSLAENSLTRLGRRTFLSTPALERLDLHSNVLMDIEDGAFEALPRLVHLNLSRNS 209
Query: 104 HFPQQIVC-SIISPRRVEIFGQ--NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
+ C S S +++ + N I A E ++ +LD + + + P
Sbjct: 210 -----LTCISDFSLQQLRVLDLSCNSIEAFQTA--EPRAEYQLAWLDLRENKLLHFPDLS 262
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL--TNISDN-AFRGLSGLRSLV 217
L L L N+ A+ G L A + L +N S N + + LS L +L
Sbjct: 263 ALPRLIYLNASNNLIRLPAEPPRGGAEGLHAPSEGWSSLPLSNPSRNTSTQPLSQLLNLD 322
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 277
L+ N ++ +P L LT L L + +N EA L L L+I+ + L +
Sbjct: 323 LSYNEIELVPEGFLEPLTSLRSLNLSRNCLRAFEAQP-GSLPCLTLLDISHNA-LETLEL 380
Query: 278 GAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE---- 333
GA A + L +L LNL+ N + P
Sbjct: 381 GARA--LGSLRTLLLQDNALRDLPLYTFTSLASLQRLNLQGNRLSPCGGPAEPGPSGCVA 438
Query: 334 ------LRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLG 387
LR +++A+N +E +L L + S+ AP L S E L
Sbjct: 439 FSGISSLRVLNLADNEMEILQAGAFLHTPLAELDLSSNPGLDVAPGALAGLEG-SLEVLA 497
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
G GL + + S L+ L L +NRL +P ++ LE L++ N FS+L
Sbjct: 498 LQGNGLAVLQVD-LPCFSCLKRLNLAENRLSRLPA--WTQAVSLEVLDLRNNSFSLLPGS 554
Query: 448 CFKGL-SYLKRLEITG 462
GL + L+RL + G
Sbjct: 555 AMGGLENSLRRLYLQG 570
Score = 122 (48.0 bits), Expect = 0.00049, P = 0.00049
Identities = 91/352 (25%), Positives = 138/352 (39%)
Query: 13 CMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD--SAIP--IYL 68
C++ + + D SCN EA P + + L L N++ SA+P IYL
Sbjct: 212 CISDFSLQQLRVLDLSCNSIEAFQTAEP-RAEYQLAWLDLRENKLLHFPDLSALPRLIYL 270
Query: 69 SLQHVDLSHTTWLIIPIGGFE----PQEKLVELQL-NHNKHFPQQIVCSIISPRRVEIFG 123
+ + +L P GG E P E L L N +++ Q + +++ +++
Sbjct: 271 NASN-NLIRLP-AEPPRGGAEGLHAPSEGWSSLPLSNPSRNTSTQPLSQLLN---LDL-S 324
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPT-PSFIYLGMLAELRVGLNVFTTLADGA 182
N I + + E LT+LR L L N LR+ P L L L + N TL GA
Sbjct: 325 YNEIELVPEGFLEPLTSLRSLNLSRNCLRAFEAQPGS--LPCLTLLDISHNALETLELGA 382
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI--PTKQ-------LSK 233
LG L L L+ L ++ F L+ L+ L L NRL P + S
Sbjct: 383 -RALGSLRTLLLQDNALRDLPLYTFTSLASLQRLNLQGNRLSPCGGPAEPGPSGCVAFSG 441
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXX 293
++ L L + N +L+AG F L L+++ L V GA A
Sbjct: 442 ISSLRVLNLADNEMEILQAGAFLHTP-LAELDLSSNPGLD-VAPGALAGLEGSLEVLALQ 499
Query: 294 XXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE---LRTIDIAEN 342
++ L L LNL EN + AW + L +D+ N
Sbjct: 500 GNGLAVLQVD-LPCFSCLKRLNLAENRLSRLP----AWTQAVSLEVLDLRNN 546
>UNIPROTKB|G3N2N1 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:DAAA02067944 RefSeq:XP_002699667.1
RefSeq:XP_591589.3 UniGene:Bt.78166 Ensembl:ENSBTAT00000057033
GeneID:540117 KEGG:bta:540117 NextBio:20878426 Uniprot:G3N2N1
Length = 844
Score = 140 (54.3 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 90 PQEKLVELQLNHN---KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
PQ ++ +L LN N + +P + V + + + + G N + I F GL L+ L+L
Sbjct: 60 PQYRIYQLFLNGNLLTRLYPNEFV-NYSNAVTLHL-GNNGLQEIRTGAFSGLKTLKRLHL 117
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
++N+L + +F+ L L L+ N + + GAF+ L +L L L L ++ N
Sbjct: 118 NNNKLEVLREDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNV 177
Query: 207 FRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQN 245
FR + L L L NRL+ +P L + + E+++ +N
Sbjct: 178 FRFVL-LTHLDLRGNRLKLMPFAGVLEHIGGIMEIQLEEN 216
Score = 134 (52.2 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 60/227 (26%), Positives = 95/227 (41%)
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
R+ L L G LT + N F S +L L +N LQ I T S L L+ L + N
Sbjct: 63 RIYQLFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKL 122
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
+L F GL L+ L+ + ++ + GAF+ + + L+
Sbjct: 123 EVLREDTFLGLESLEYLQ-ADYNYISAIEAGAFSKLNKLKVLI---------LNDNLLLS 172
Query: 308 LPN-------LYHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML- 357
LP+ L HL+L+ N F+ + + I + ENP C C++L L+ L
Sbjct: 173 LPSNVFRFVLLTHLDLRGNRLKLMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLD 232
Query: 358 -VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRG 403
+ + C +P L K + L+ +DL C + D+A RG
Sbjct: 233 TITVFVGEIVCETPFRLHGKDVTQLTRQDL-CPRK---STGDSAQRG 275
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 52/199 (26%), Positives = 85/199 (42%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 452
LT + N F S +L L +N LQ I T S L L+ L + N +L F GL
Sbjct: 74 LTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGL 133
Query: 453 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN-------L 505
L+ L+ + ++ + GAF+ I+ ++ L+ LP+ L
Sbjct: 134 ESLEYLQ-ADYNYISAIEAGAFSKLNKLKVL---------ILNDNLLLSLPSNVFRFVLL 183
Query: 506 YHLNLKENAFT--SFSESMLAWPELRTIDIAENPIECGCNILWLREML--VRRNTSAVFC 561
HL+L+ N F+ + + I + ENP C C++L L+ L + + C
Sbjct: 184 THLDLRGNRLKLMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGEIVC 243
Query: 562 NSPAPLKYKSLISLSAEDL 580
+P L K + L+ +DL
Sbjct: 244 ETPFRLHGKDVTQLTRQDL 262
Score = 128 (50.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI+ I + F LT+LR LYL+ N L + F L L L + NV +
Sbjct: 407 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMFDGLQSLQYLYLEYNVIKEIKPLT 466
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ L L L L L ++ DN F G + L L L +N +P K L +L +++
Sbjct: 467 FDALINLQLLFLNNNLLRSLPDNIFGG-TALTRLNLRNNHFSHLPVKGVLDQLPAFIQID 525
Query: 242 IGQN 245
+ +N
Sbjct: 526 LQEN 529
Score = 118 (46.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 56/213 (26%), Positives = 83/213 (38%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L G L + N S L L L +NR+ I + LT L L + N +L
Sbjct: 380 LYLTGNYLQMVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLF 439
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
F GL L+ L + N+ + K D + + G L
Sbjct: 440 PAMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTA-L 496
Query: 312 YHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVF--- 366
LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 497 TRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVIINEV 556
Query: 367 -CNSPAPLKYKSLISLSAEDLGCAGAGLTNISD 398
C SPA + L L E + C N+SD
Sbjct: 557 TCESPAKHAGEILKFLGREAI-CPDG--PNLSD 586
Score = 115 (45.5 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 50/190 (26%), Positives = 75/190 (39%)
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
S + L G L + N S L L L +NR+ I + LT L L + N
Sbjct: 376 SPKKLYLTGNYLQMVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYL 435
Query: 442 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVG 501
+L F GL L+ L + N+ + K D + D + G
Sbjct: 436 EVLFPAMFDGLQSLQYLYLE--YNVIKEIKPLTFDALINLQLLFLNNNLLRSLP-DNIFG 492
Query: 502 LPNLYHLNLKENAFTSFS-ESML-AWPELRTIDIAENPIECGCNILWLREMLVRRNTSAV 559
L LNL+ N F+ + +L P ID+ ENP +C C+I+ L++ N+ +
Sbjct: 493 GTALTRLNLRNNHFSHLPVKGVLDQLPAFIQIDLQENPWDCTCDIMGLKDWTEHANSPVI 552
Query: 560 F----CNSPA 565
C SPA
Sbjct: 553 INEVTCESPA 562
Score = 112 (44.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 45/181 (24%), Positives = 73/181 (40%)
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
++V + S V P+ S S + ++ C TNISD + S + L LT N
Sbjct: 327 IMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKFTNISDLQPKPTSP-KKLYLTGN 385
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 475
LQ + L + + L+ L +G N ++++ G F L+ L+RL + G N V A
Sbjct: 386 YLQMVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNG--NYLEVLFPAMF 443
Query: 476 DXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAE 535
D I+ L NL L L N S +++ L +++
Sbjct: 444 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGTALTRLNLRN 503
Query: 536 N 536
N
Sbjct: 504 N 504
Score = 112 (44.5 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L+L+ N L + F+ L +G N + GAF+GL L L L L +
Sbjct: 67 LFLNGNLLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLR 126
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N + +I SKL +L+ L + N L + F+ + L
Sbjct: 127 EDTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTH 185
Query: 264 LEITG 268
L++ G
Sbjct: 186 LDLRG 190
Score = 104 (41.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 38/143 (26%), Positives = 59/143 (41%)
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
TNISD + S + L LT N LQ + L + + L+ L +G N ++++ G F L+
Sbjct: 365 TNISDLQPKPTSP-KKLYLTGNYLQMVYKNDLLEYSSLDLLHLGNNRIAVIQEGAFTNLT 423
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L+RL + G N V A D I+ L NL L L N
Sbjct: 424 SLRRLYLNG--NYLEVLFPAMFDGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNN 481
Query: 320 AFTSFSESMLAWPELRTIDIAEN 342
S +++ L +++ N
Sbjct: 482 LLRSLPDNIFGGTALTRLNLRNN 504
Score = 78 (32.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 83 IPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTA 140
I G F + L L LN+NK + + S ++ N IS I+ F L
Sbjct: 101 IRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQA-DYNYISAIEAGAFSKLNK 159
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAEL 168
L++L L+DN L S+P+ F ++ +L L
Sbjct: 160 LKVLILNDNLLLSLPSNVFRFV-LLTHL 186
Score = 62 (26.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG-FEPQEKLVELQLNHNKHFPQQ 108
L+L+ N + ++ S + ++ L H+DL ++P G E ++E+QL N P
Sbjct: 163 LILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKLMPFAGVLEHIGGIMEIQLEEN---PWN 219
Query: 109 IVCSII 114
C ++
Sbjct: 220 CTCDLL 225
>RGD|1310506 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] RGD:1310506 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 EMBL:CH473976 GeneTree:ENSGT00680000099775 CTD:22865
OMA:IAPYQTR OrthoDB:EOG473PQR IPI:IPI00202395 RefSeq:NP_001101153.1
UniGene:Rn.68333 Ensembl:ENSRNOT00000013009 GeneID:310519
KEGG:rno:310519 UCSC:RGD:1310506 NextBio:662093 Uniprot:D4A062
Length = 979
Score = 142 (55.0 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 60/212 (28%), Positives = 94/212 (44%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N + I F GL L+ LYL +N+L +F+ L L L+ NV + GA
Sbjct: 109 GNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVIKRIESGA 168
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK-QLSKLTR-LEEL 240
F L +L L L + + N F+ +S L L L NRL+ + + L + R L EL
Sbjct: 169 FRNLSKLRVLILNDNLIPVLPTNLFKAVS-LTHLDLRGNRLKVLFYRGMLDHIGRSLMEL 227
Query: 241 EIGQNGFSML-EAGCFKGLSYLKRLEITG-ASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
++ +N ++ E K S+L+R+ T ++T F
Sbjct: 228 QLEENPWNCTCEIVQLK--SWLERIPYTALVGDITCETPFHFHGKDLREIKKTELCPLLS 285
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
E A +G+P+L + KENA+ + SML+
Sbjct: 286 DSEVEASLGIPHLS--SSKENAWPTKPSSMLS 315
Score = 139 (54.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 39/125 (31%), Positives = 58/125 (46%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N +R + T SF++L + +G N + GAFNGL L L L L
Sbjct: 82 LYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFR 141
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N ++ I + L++L L + N +L FK +S L
Sbjct: 142 NDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLFKAVS-LTH 200
Query: 264 LEITG 268
L++ G
Sbjct: 201 LDLRG 205
Score = 123 (48.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I +I ++ F ++L +L+L +N++ V +FI L L L + N L G F
Sbjct: 418 NLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFR 477
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L + I AF + L+ L L +N L+++PT + T L L + +
Sbjct: 478 GLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAG-TSLARLNLRK 536
Query: 245 NGFSMLE-AGCFKGLSYLKRLEI 266
N F L AG + L+ + ++++
Sbjct: 537 NYFLYLPVAGVLEHLNAIVQIDL 559
Score = 122 (48.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/123 (30%), Positives = 53/123 (43%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N ++ + F L L +G N + + DGAF L L +L L G + ++
Sbjct: 413 LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLT 472
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
FRGL L L N ++ I S + L+ L + N L F G S L R
Sbjct: 473 PGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTS-LAR 531
Query: 264 LEI 266
L +
Sbjct: 532 LNL 534
Score = 114 (45.2 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 57/245 (23%), Positives = 99/245 (40%)
Query: 343 PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
P C CN L + ++ + N N+ + L + L +A+ L + + I + F
Sbjct: 374 PTGCTCN-LHINDLGLTVNCKERGFNNISELLPRPL---NAKKLYLSSNLIQKIYRSDFW 429
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
S L L L +NR+ + L L+ L + N L G F+GL L L
Sbjct: 430 NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFE- 488
Query: 463 ASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSES 521
N+ R ++ AF+ + DA G +L LNL++N F +
Sbjct: 489 -FNVIREIQPAAFS-LMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVA 545
Query: 522 MLA--WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISL 575
+ + ID+ ENP +C C+++ W+ + V C +P L ++ + ++
Sbjct: 546 GVLEHLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRTPENLTHRDVRTI 605
Query: 576 SAEDL 580
E L
Sbjct: 606 ELEVL 610
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ--EKLVELQLNHNKHFPQ 107
L+L+ N I + + + +SL H+DL ++ G L+ELQL N P
Sbjct: 178 LILNDNLIPVLPTNLFKAVSLTHLDLRGNRLKVLFYRGMLDHIGRSLMELQLEEN---PW 234
Query: 108 QIVCSII 114
C I+
Sbjct: 235 NCTCEIV 241
>MGI|MGI:2679447 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] MGI:MGI:2679447 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 EMBL:CH466547 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 CTD:22865
eggNOG:NOG292495 OMA:IAPYQTR OrthoDB:EOG473PQR EMBL:AB097572
EMBL:AK158856 EMBL:BC066059 IPI:IPI00329845 RefSeq:NP_942564.2
UniGene:Mm.331076 ProteinModelPortal:Q810B9 SMR:Q810B9
PhosphoSite:Q810B9 PaxDb:Q810B9 PRIDE:Q810B9
Ensembl:ENSMUST00000059407 GeneID:386750 KEGG:mmu:386750
InParanoid:Q6NZM5 NextBio:405558 Bgee:Q810B9 CleanEx:MM_SLITRK3
Genevestigator:Q810B9 GermOnline:ENSMUSG00000048304 Uniprot:Q810B9
Length = 980
Score = 142 (55.0 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 60/212 (28%), Positives = 94/212 (44%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N + I F GL L+ LYL +N+L +F+ L L L+ NV + GA
Sbjct: 110 GNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVIKRIESGA 169
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK-QLSKLTR-LEEL 240
F L +L L L + + N F+ +S L L L NRL+ + + L + R L EL
Sbjct: 170 FRNLSKLRVLILNDNLIPVLPTNLFKAVS-LTHLDLRGNRLKVLFYRGMLDHIGRSLMEL 228
Query: 241 EIGQNGFSML-EAGCFKGLSYLKRLEITG-ASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
++ +N ++ E K S+L+R+ T ++T F
Sbjct: 229 QLEENPWNCTCEIVQLK--SWLERIPYTALVGDITCETPFHFHGKDLREIKKTELCPLLS 286
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
E A +G+P+L + KENA+ + SML+
Sbjct: 287 DSEVEASLGIPHLS--SSKENAWPTKPSSMLS 316
Score = 138 (53.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 39/125 (31%), Positives = 58/125 (46%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N +R + T SF++L + +G N + GAFNGL L L L L
Sbjct: 83 LYLQRNSMRRLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFR 142
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N ++ I + L++L L + N +L FK +S L
Sbjct: 143 NDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLFKAVS-LTH 201
Query: 264 LEITG 268
L++ G
Sbjct: 202 LDLRG 206
Score = 123 (48.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I +I ++ F ++L +L+L +N++ V +FI L L L + N L G F
Sbjct: 419 NLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFR 478
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL L L + I AF + L+ L L +N L+++PT + T L L + +
Sbjct: 479 GLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAG-TSLARLNLRK 537
Query: 245 NGFSMLE-AGCFKGLSYLKRLEI 266
N F L AG + L+ + ++++
Sbjct: 538 NYFLYLPVAGVLEHLNAIVQIDL 560
Score = 122 (48.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/123 (30%), Positives = 53/123 (43%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LYL N ++ + F L L +G N + + DGAF L L +L L G + ++
Sbjct: 414 LYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLT 473
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
FRGL L L N ++ I S + L+ L + N L F G S L R
Sbjct: 474 PGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTS-LAR 532
Query: 264 LEI 266
L +
Sbjct: 533 LNL 535
Score = 114 (45.2 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 57/245 (23%), Positives = 99/245 (40%)
Query: 343 PIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFR 402
P C CN L + ++ + N N+ + L + L +A+ L + + I + F
Sbjct: 375 PTGCTCN-LHINDLGLTVNCKERGFNNISELLPRPL---NAKKLYLSSNLIQKIYRSDFW 430
Query: 403 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
S L L L +NR+ + L L+ L + N L G F+GL L L
Sbjct: 431 NFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFE- 489
Query: 463 ASNLTR-VRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSES 521
N+ R ++ AF+ + DA G +L LNL++N F +
Sbjct: 490 -FNVIREIQPAAFS-LMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVA 546
Query: 522 MLA--WPELRTIDIAENPIECGCNIL----WLREMLVRRNTSAVFCNSPAPLKYKSLISL 575
+ + ID+ ENP +C C+++ W+ + V C +P L ++ + ++
Sbjct: 547 GVLEHLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRTPENLTHRDVRTI 606
Query: 576 SAEDL 580
E L
Sbjct: 607 ELEVL 611
Score = 113 (44.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 38/127 (29%), Positives = 56/127 (44%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N + R+ F L + L +N L+ + T +F L +L L + N + F
Sbjct: 87 RNSMRRLYTNSFLHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTF 146
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL L L + I AFR LS LR L+L DN + +PT L K L L++
Sbjct: 147 LGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTN-LFKAVSLTHLDLR 205
Query: 244 QNGFSML 250
N +L
Sbjct: 206 GNRLKVL 212
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ--EKLVELQLNHNKHFPQ 107
L+L+ N I + + + +SL H+DL ++ G L+ELQL N P
Sbjct: 179 LILNDNLIPVLPTNLFKAVSLTHLDLRGNRLKVLFYRGMLDHIGRSLMELQLEEN---PW 235
Query: 108 QIVCSII 114
C I+
Sbjct: 236 NCTCEIV 242
>ZFIN|ZDB-GENE-080327-8 [details] [associations]
symbol:lrrtm2 "leucine rich repeat transmembrane
neuronal 2" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-8 InterPro:IPR003591 SMART:SM00369
GO:GO:0042802 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104056 EMBL:CR381529 EMBL:CU681852
IPI:IPI00866135 Ensembl:ENSDART00000105477
Ensembl:ENSDART00000130532 Uniprot:F1Q8H9
Length = 543
Score = 200 (75.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 71/253 (28%), Positives = 109/253 (43%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N+I+ + + F+GL L+ L L N++ +P +FI+L L L + N T L F+
Sbjct: 96 NQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFIHLINLQILDLSFNQMTALEPELFH 155
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
GL +L L LR L AF L L L++NRL+S+ + L +L EL +
Sbjct: 156 GLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEH 215
Query: 245 NGFSMLEAGCFKGLSYLKRLEI--TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
N + + F L L+ L + +NLT + + + E
Sbjct: 216 NHLTKINLAHFPRLVALQFLYLQWNKINNLTSTMEWKWTTLEKLDLTGNEIRVLIPEVFE 275
Query: 303 GALVGLPNLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECG---CNIL-WLREML 357
LP+L L L N ++ S++M W L I ++ N EC CN+ WL
Sbjct: 276 T----LPSLKILLLDNNKLSNLDSQTMDMWKSLNVIGLSSNLWECTKRICNLATWLSTFK 331
Query: 358 VRRNTSAVFCNSP 370
R S + C SP
Sbjct: 332 GRWEHS-ILCYSP 343
Score = 156 (60.0 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 49/156 (31%), Positives = 70/156 (44%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N IS + F G T L L+LD NQ+ +V +F L L +L + N T L + F
Sbjct: 72 NSISELSSDQFFGFTQLTWLHLDHNQITTVHEDAFQGLYKLKDLNLSSNRITKLPNTTFI 131
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L LDL +T + F GL L+ L L N L++ P + LE L +
Sbjct: 132 HLINLQILDLSFNQMTALEPELFHGLRKLQILHLRSNSLRTTPVRAFWDCRSLEYLGLSN 191
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
N L F GL L+ L + ++LT++ F
Sbjct: 192 NRLRSLARNGFAGLIKLRELHLEH-NHLTKINLAHF 226
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 66/234 (28%), Positives = 97/234 (41%)
Query: 114 ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLN 173
+ P +F QN + R +A G + + L+L N + S+ +F +L L EL +G N
Sbjct: 53 LPPGARRLFLQNNVIRALRAGTFGPSTVT-LWLYSNNISSIQPGTFRHLPALEELDLGDN 111
Query: 174 V-FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
LA F+GL RL AL L L ++ FRGL L+ L L +N L + +
Sbjct: 112 PHLRVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRGLHSLQYLYLQENGLLYLQDDLFA 171
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
L L L + N L G F+GL L RL + A+ L V + AF
Sbjct: 172 DLANLSHLFLHGNRLRALSEGVFRGLPSLDRL-LLHANRLATVHRRAFRGLARLTILYLF 230
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC 346
+ L LP L L L N + + W R ++ +P+ C
Sbjct: 231 NNSLAA-LPGDPLAALPALQFLRLNANPWACDCRARPLWAWFRRTRVSSSPVPC 283
Score = 185 (70.2 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 66/223 (29%), Positives = 99/223 (44%)
Query: 27 PSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAI--PIYLSLQHVDLSHTTWLIIP 84
P+ + Q N +P+ P +RL L N I+ + + P ++L S+ I P
Sbjct: 37 PTVSCQANNFSSVPTGLPPGARRLFLQNNVIRALRAGTFGPSTVTLWLY--SNNISSIQP 94
Query: 85 IGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR--ISRIDQACFEGLTALR 142
G F L EL L N H + RR++ R ++ + A F GL +L+
Sbjct: 95 -GTFRHLPALEELDLGDNPHLRVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRGLHSLQ 153
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
LYL +N L + F L L+ L + N L++G F GL L L L L +
Sbjct: 154 YLYLQENGLLYLQDDLFADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATV 213
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
AFRGL+ L L L +N L ++P L+ L L+ L + N
Sbjct: 214 HRRAFRGLARLTILYLFNNSLAALPGDPLAALPALQFLRLNAN 256
Score = 154 (59.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 67/253 (26%), Positives = 105/253 (41%)
Query: 142 RILYLDDNQLRSVPTPSFIYLG-MLAELRVGLNVFTTLADGAFNGLGRLSALDLR-GAGL 199
R L+L +N +R++ +F G L + N +++ G F L L LDL L
Sbjct: 58 RRLFLQNNVIRALRAGTF---GPSTVTLWLYSNNISSIQPGTFRHLPALEELDLGDNPHL 114
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
++ + F GL L++L L +L S+P+ L L+ L + +NG L+ F L+
Sbjct: 115 RVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRGLHSLQYLYLQENGLLYLQDDLFADLA 174
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L L + G + L + +G F + A GL L L L N
Sbjct: 175 NLSHLFLHG-NRLRALSEGVFRGLPSLDRLLLHANRLAT-VHRRAFRGLARLTILYLFNN 232
Query: 320 AFTSF-SESMLAWPELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYK 376
+ + + + A P L+ + + NP C C LW R ++S V C SP +
Sbjct: 233 SLAALPGDPLAALPALQFLRLNANPWACDCRARPLWAWFRRTRVSSSPVPCASPPHRRGT 292
Query: 377 SLISLSAEDL-GC 388
L L D GC
Sbjct: 293 DLRHLRPRDFDGC 305
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 56/215 (26%), Positives = 88/215 (40%)
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
+S P ++ L +L DLG L ++ + F GL L++L L +L S+P+
Sbjct: 90 SSIQPGTFRHLPALEELDLG-DNPHLRVLAPDTFHGLRRLQALHLYRCQLASLPSAIFRG 148
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXX 487
L L+ L + +NG L+ F L+ L L + G + L + +G F
Sbjct: 149 LHSLQYLYLQENGLLYLQDDLFADLANLSHLFLHG-NRLRALSEGVFRGLPSLDRLLLHA 207
Query: 488 XXXXXIIEEDALVGLPNLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNI-- 544
+ A GL L L L N+ + + + A P L+ + + NP C C
Sbjct: 208 NRLATV-HRRAFRGLARLTILYLFNNSLAALPGDPLAALPALQFLRLNANPWACDCRARP 266
Query: 545 LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 579
LW R ++S V C SP + L L D
Sbjct: 267 LWAWFRRTRVSSSPVPCASPPHRRGTDLRHLRPRD 301
>UNIPROTKB|F1NRN7 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
PANTHER:PTHR23155:SF38 IPI:IPI00600917 EMBL:AADN02030891
Ensembl:ENSGALT00000014266 Uniprot:F1NRN7
Length = 529
Score = 199 (75.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 100/418 (23%), Positives = 180/418 (43%)
Query: 30 NLQEANLDVIPSHSNPSIQ--RLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG 87
+L + ++ ++PS Q L L +N+++++ + + ++L + LS + +P
Sbjct: 106 DLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLP-DS 164
Query: 88 FEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
+ +KL L L HNK P +V + S + + NRI+ +++ + L+ L +L
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLTSLATLYL-RFNRITTVEKD-IKNLSKLTMLS 221
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
+ +N+++ +P L L L V N L + +++ LDL+ L ++ +
Sbjct: 222 IRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPE-EIGSCTQITNLDLQHNELLDLPET 279
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
LS L L L NRL +IP K L+K + L+EL + N S L G L +K
Sbjct: 280 -IGNLSSLSRLGLRYNRLSAIP-KSLAKCSELDELNLENNNISTLPEGLLSSL--VKLTS 335
Query: 266 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
+T A N + I G L LN+K+N TS
Sbjct: 336 LTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Query: 326 ESMLAWPELRTIDIAENPI----ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISL 381
W + +++A N + E ++ L +++ N + L+ + L
Sbjct: 396 LDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDL 455
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L L N + A+ L L+ LVLT+N+L ++P + + LT L L +G+N
Sbjct: 456 EENKL----ESLPN--EIAY--LKDLQKLVLTNNQLTTLP-RGIGHLTNLTHLGLGEN 504
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 85/335 (25%), Positives = 140/335 (41%)
Query: 116 PRRVEIFGQNRISRIDQACF----EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170
P R E Q+R + F EG+ T R+L L N+++++ F L EL +
Sbjct: 37 PPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL 96
Query: 171 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 230
N+ + + GAFN L L L LR L I F GLS L L +++N++ +
Sbjct: 97 NENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYM 156
Query: 231 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 290
L L+ LE+G N + F GL+ L++L + NLT + A +
Sbjct: 157 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC-NLTSIPTEALSHLHGLIVLR 215
Query: 291 XXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCN 349
I + LY L + E + + ++M P L +++ I CN
Sbjct: 216 LRHLNINA-IRD---YSFKRLYRLKVLEISHWPYLDTMT--PNCLYGLNLTSLSIT-HCN 268
Query: 350 ILWLREMLVRRNTSAVFCN---SPAPLKYKSLIS--LSAEDLGCAGAGLTNISDNAFRGL 404
+ + + VR F N +P S++ L +++ G L + AFRGL
Sbjct: 269 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 328
Query: 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ LR L ++ N+L ++ + LE L + N
Sbjct: 329 NYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 363
Score = 186 (70.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 60/193 (31%), Positives = 85/193 (44%)
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQAC 134
L H + G + +L++L N K Q S +E+ +N +S ++
Sbjct: 50 LCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL-NENIVSAVEPGA 108
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F L LR L L N+L+ +P F L L +L + N L D F L L +L++
Sbjct: 109 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 168
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
L IS AF GL+ L L L L SIPT+ LS L L L + + +
Sbjct: 169 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 228
Query: 255 FKGLSYLKRLEIT 267
FK L LK LEI+
Sbjct: 229 FKRLYRLKVLEIS 241
Score = 165 (63.1 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 76/288 (26%), Positives = 133/288 (46%)
Query: 2 LVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVI-PSHSNP--SIQRLVLSTNRIK 58
L+D G+ R K +N E + F + L E + + P N +++ L L +NR+K
Sbjct: 69 LLDLGKN-RIKTLNQDEFASFPHLE-ELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 126
Query: 59 TVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIIS 115
+ + LS L +D+S +I+ F+ L L++ N + + + S
Sbjct: 127 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 186
Query: 116 PRRVEIFGQNRISRIDQAC--FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-L 172
++ + N S +A GL LR+ +L+ N +R SF L L L +
Sbjct: 187 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY---SFKRLYRLKVLEISHW 243
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
T+ GL L++L + LT + A R L LR L L+ N + +I L
Sbjct: 244 PYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLH 302
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 303 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 349
Score = 160 (61.4 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL + ++ + F L L L +N + ++ + L L L + N ++
Sbjct: 70 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 129
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 130 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHRAFSGLNSL 187
Query: 312 YHLNLKENAFTSFSESMLAWPE----LRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L L++ TS L+ LR + N I + L + V + +
Sbjct: 188 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVLEISHWPYL 246
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
++ P L L+ L LT + A R L LR L L+ N + +I L +
Sbjct: 247 DTMTP---NCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 303
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 304 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 349
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 81/363 (22%), Positives = 138/363 (38%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R+++ R ++P + + TRL L++G+N L F +L+ LE+ + ++
Sbjct: 47 RAVLCHRKRFVAVP-EGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELN-ENIVS 102
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WP 332
V GAF + I G GL NL L++ EN + M
Sbjct: 103 AVEPGAF-NNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 161
Query: 333 ELRTIDIAENPIE-------CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385
L+++++ +N + G N L E L + + A LI L
Sbjct: 162 NLKSLEVGDNDLVYISHRAFSGLNSL---EQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 218
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L + I D +F+ L L+ L ++ L ++ L L L L I + +
Sbjct: 219 LN-----INAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAV 272
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
+ L YL+ L ++ N +G+ ++E A GL
Sbjct: 273 PYLAVRHLVYLRFLNLS--YNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 330
Query: 505 LYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFC 561
L LN+ N T+ ES + L T+ + NP+ C C +LW+ R + N C
Sbjct: 331 LRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 390
Query: 562 NSP 564
+P
Sbjct: 391 ATP 393
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 85/335 (25%), Positives = 140/335 (41%)
Query: 116 PRRVEIFGQNRISRIDQACF----EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170
P R E Q+R + F EG+ T R+L L N+++++ F L EL +
Sbjct: 43 PPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL 102
Query: 171 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 230
N+ + + GAFN L L L LR L I F GLS L L +++N++ +
Sbjct: 103 NENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYM 162
Query: 231 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 290
L L+ LE+G N + F GL+ L++L + NLT + A +
Sbjct: 163 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC-NLTSIPTEALSHLHGLIVLR 221
Query: 291 XXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCN 349
I + LY L + E + + ++M P L +++ I CN
Sbjct: 222 LRHLNINA-IRD---YSFKRLYRLKVLEISHWPYLDTMT--PNCLYGLNLTSLSIT-HCN 274
Query: 350 ILWLREMLVRRNTSAVFCN---SPAPLKYKSLIS--LSAEDLGCAGAGLTNISDNAFRGL 404
+ + + VR F N +P S++ L +++ G L + AFRGL
Sbjct: 275 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 334
Query: 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ LR L ++ N+L ++ + LE L + N
Sbjct: 335 NYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 369
Score = 186 (70.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 60/193 (31%), Positives = 85/193 (44%)
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQAC 134
L H + G + +L++L N K Q S +E+ +N +S ++
Sbjct: 56 LCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL-NENIVSAVEPGA 114
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F L LR L L N+L+ +P F L L +L + N L D F L L +L++
Sbjct: 115 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 174
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
L IS AF GL+ L L L L SIPT+ LS L L L + + +
Sbjct: 175 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 234
Query: 255 FKGLSYLKRLEIT 267
FK L LK LEI+
Sbjct: 235 FKRLYRLKVLEIS 247
Score = 165 (63.1 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 76/288 (26%), Positives = 133/288 (46%)
Query: 2 LVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVI-PSHSNP--SIQRLVLSTNRIK 58
L+D G+ R K +N E + F + L E + + P N +++ L L +NR+K
Sbjct: 75 LLDLGKN-RIKTLNQDEFASFPHLE-ELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 132
Query: 59 TVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIIS 115
+ + LS L +D+S +I+ F+ L L++ N + + + S
Sbjct: 133 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 192
Query: 116 PRRVEIFGQNRISRIDQAC--FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-L 172
++ + N S +A GL LR+ +L+ N +R SF L L L +
Sbjct: 193 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY---SFKRLYRLKVLEISHW 249
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
T+ GL L++L + LT + A R L LR L L+ N + +I L
Sbjct: 250 PYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLH 308
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 309 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 355
Score = 160 (61.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL + ++ + F L L L +N + ++ + L L L + N ++
Sbjct: 76 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 135
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 136 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHRAFSGLNSL 193
Query: 312 YHLNLKENAFTSFSESMLAWPE----LRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L L++ TS L+ LR + N I + L + V + +
Sbjct: 194 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVLEISHWPYL 252
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
++ P L L+ L LT + A R L LR L L+ N + +I L +
Sbjct: 253 DTMTP---NCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 309
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 310 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 355
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 81/363 (22%), Positives = 138/363 (38%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R+++ R ++P + + TRL L++G+N L F +L+ LE+ + ++
Sbjct: 53 RAVLCHRKRFVAVP-EGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELN-ENIVS 108
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WP 332
V GAF + I G GL NL L++ EN + M
Sbjct: 109 AVEPGAF-NNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 167
Query: 333 ELRTIDIAENPIE-------CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385
L+++++ +N + G N L E L + + A LI L
Sbjct: 168 NLKSLEVGDNDLVYISHRAFSGLNSL---EQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 224
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L + I D +F+ L L+ L ++ L ++ L L L L I + +
Sbjct: 225 LN-----INAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAV 278
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
+ L YL+ L ++ N +G+ ++E A GL
Sbjct: 279 PYLAVRHLVYLRFLNLS--YNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 505 LYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFC 561
L LN+ N T+ ES + L T+ + NP+ C C +LW+ R + N C
Sbjct: 337 LRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 396
Query: 562 NSP 564
+P
Sbjct: 397 ATP 399
>MGI|MGI:2682211 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor
1" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=ISO;ISA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IGI;IDA] [GO:0007189
"adenylate cyclase-activating G-protein coupled receptor signaling
pathway" evidence=ISO] [GO:0007567 "parturition" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0042562 "hormone binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IMP] [GO:0060658 "nipple
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 MGI:MGI:2682211 GO:GO:0016021 GO:GO:0005886
GO:GO:0030154 GO:GO:0046872 GO:GO:0004930 GO:GO:0007189
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030198
GO:GO:0042562 GO:GO:0007188 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372
SMART:SM00013 HSSP:P01130 GO:GO:0060427 CTD:59350
HOVERGEN:HBG026354 KO:K04306 OMA:YTLTTRP GO:GO:0060658
EMBL:AY509975 EMBL:AY255542 IPI:IPI00417064 RefSeq:NP_997617.1
UniGene:Mm.331086 ProteinModelPortal:Q6R6I7 SMR:Q6R6I7
STRING:Q6R6I7 PhosphoSite:Q6R6I7 PRIDE:Q6R6I7
Ensembl:ENSMUST00000078527 GeneID:381489 KEGG:mmu:381489
UCSC:uc008pnv.1 GeneTree:ENSGT00650000093266 HOGENOM:HOG000049056
InParanoid:Q6R6I7 OrthoDB:EOG4NGGM1 ChiTaRS:RXFP1 NextBio:402138
Bgee:Q6R6I7 CleanEx:MM_RXFP1 Genevestigator:Q6R6I7 Uniprot:Q6R6I7
Length = 758
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 72/273 (26%), Positives = 121/273 (44%)
Query: 11 SKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLS 69
S+C+ P RD + EANL +PS S+ ++ + L N I+T+ + Y
Sbjct: 93 SECLVGSVPMHCLCRDLELDCDEANLRAVPSVSS-NVTVMSLQRNFIRTLPPNGFRKYHE 151
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRIS 128
LQ + L + + + F L +L L+HN+ F + V + I N +S
Sbjct: 152 LQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLS 211
Query: 129 RIDQACFEGLTALRILYLDDNQLRSVPT-PSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
RI F GL +L +L L +N L +P P ++ L L N L + F
Sbjct: 212 RISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCN 271
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L+ L +R + ++++AF L L L L N+++++P L L +L I N
Sbjct: 272 NLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPI 331
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+E F L+ LK L + G ++ +++ F
Sbjct: 332 QKIEVNQFDCLAKLKSLSLEGIE-ISNIQQRMF 363
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 72/313 (23%), Positives = 124/313 (39%)
Query: 83 IPIGGFEPQEKLVELQLNHNKHFPQQIVC--SIISPRRVEIFGQNRISRIDQACFEGLTA 140
+P GF +L +L L +N+ + + S ++ + NRI+ + FE L
Sbjct: 141 LPPNGFRKYHELQKLCLQNNRIHSVSVSAFRGLRSLTKLYL-SHNRITFLKPGVFEDLHR 199
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF-NGLGRLSALDLRGAGL 199
L L ++DN L + +F L L L + N T L D + RL LD G +
Sbjct: 200 LEWLIIEDNHLSRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRI 259
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
N+ + F + L LV+ N++ + + L +L+EL++G N L FK L
Sbjct: 260 HNLRNLTFISCNNLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLK 319
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L +L I+ + + ++ F D I++ L NL H+ K+
Sbjct: 320 ELSQLNIS-YNPIQKIEVNQF-DCLAKLKSLSLEGIEISNIQQRMFRPLINLSHIYFKKF 377
Query: 320 AFTSFSESMLAW-PELRTIDIAENPIECGCN--ILWLREMLVRRNTSAVFCNSPAPLKYK 376
+ ++ + + P I EN + +W+ + V C P
Sbjct: 378 QYCGYAPHVRSCKPNTDGISSLENLLASIIQRVFVWVVSAITCFGNIFVICMRPYIRSEN 437
Query: 377 SLISLSAEDLGCA 389
L ++S L CA
Sbjct: 438 KLHAMSIISLCCA 450
Score = 148 (57.2 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 57/222 (25%), Positives = 98/222 (44%)
Query: 47 IQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHF 105
+Q+L L NRI +V SA SL + LSH + G FE +L L + N H
Sbjct: 152 LQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDN-HL 210
Query: 106 PQQIVCSI--ISPRRVEIFGQNRISRI-DQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ + ++ + + N ++R+ D+ + + L L + N++ ++ +FI
Sbjct: 211 SRISPLTFYGLNSLILLVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISC 270
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N L + AF L +L LDL + N+ N F+ L L L ++ N
Sbjct: 271 NNLTVLVMRKNKINYLNEHAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNP 330
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+Q I Q L +L+ L + S ++ F+ L L +
Sbjct: 331 IQKIEVNQFDCLAKLKSLSLEGIEISNIQQRMFRPLINLSHI 372
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 60/254 (23%), Positives = 100/254 (39%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S + + L N ++++P K L++L + N + F+GL L +L ++ +
Sbjct: 126 SNVTVMSLQRNFIRTLPPNGFRKYHELQKLCLQNNRIHSVSVSAFRGLRSLTKLYLSH-N 184
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
+T ++ G F D I GL +L L L NA T + L
Sbjct: 185 RITFLKPGVFEDLHRLEWLIIEDNHLSR-ISPLTFYGLNSLILLVLMNNALTRLPDKPLC 243
Query: 331 --WPELRTIDIAENPIECGCNILWLR----EMLVRRNTSAVFCNSPAPLKYKSLISLSAE 384
P L +D N I N+ ++ +LV R + N A + L L
Sbjct: 244 QHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINYLNEHA---FTHLQKLDEL 300
Query: 385 DLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
DLG + N+ N F+ L L L ++ N +Q I Q L +L+ L + S +
Sbjct: 301 DLG--SNKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDCLAKLKSLSLEGIEISNI 358
Query: 445 EAGCFKGLSYLKRL 458
+ F+ L L +
Sbjct: 359 QQRMFRPLINLSHI 372
Score = 123 (48.4 bits), Expect = 0.00046, P = 0.00046
Identities = 65/263 (24%), Positives = 100/263 (38%)
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
D+ LR+VP+ S + + + N TL F L L L+ + ++S +A
Sbjct: 114 DEANLRAVPSVS----SNVTVMSLQRNFIRTLPPNGFRKYHELQKLCLQNNRIHSVSVSA 169
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
FRGL L L L+ NR+ + L RLE L I N S + F GL+ L L +
Sbjct: 170 FRGLRSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPLTFYGLNSLILLVL 229
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE 326
+ LTR+ + + NL L +++N +E
Sbjct: 230 MNNA-LTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINYLNE 288
Query: 327 SMLAW-PELRTIDIAENPIE-CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAE 384
+L +D+ N IE NI + L + N S ++ L L +
Sbjct: 289 HAFTHLQKLDELDLGSNKIENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDCLAKLKS- 347
Query: 385 DLGCAGAGLTNISDNAFRGLSGL 407
L G ++NI FR L L
Sbjct: 348 -LSLEGIEISNIQQRMFRPLINL 369
>UNIPROTKB|Q9HBW1 [details] [associations]
symbol:LRRC4 "Leucine-rich repeat-containing protein 4"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH236947
MEROPS:I43.001 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AF196976 EMBL:AJ297858 EMBL:AY358307
EMBL:AK172751 EMBL:AK314047 EMBL:BC111561 EMBL:BC111745
IPI:IPI00005516 RefSeq:NP_071426.1 UniGene:Hs.655003 PDB:2DL9
PDB:3ZYI PDBsum:2DL9 PDBsum:3ZYI ProteinModelPortal:Q9HBW1
SMR:Q9HBW1 STRING:Q9HBW1 PhosphoSite:Q9HBW1 DMDM:51701696
PaxDb:Q9HBW1 PRIDE:Q9HBW1 Ensembl:ENST00000249363 GeneID:64101
KEGG:hsa:64101 UCSC:uc003vmk.3 CTD:64101 GeneCards:GC07M127667
HGNC:HGNC:15586 MIM:610486 neXtProt:NX_Q9HBW1 PharmGKB:PA30463
InParanoid:Q9HBW1 KO:K16351 OMA:CGCEAVW OrthoDB:EOG4NGGM6
PhylomeDB:Q9HBW1 EvolutionaryTrace:Q9HBW1 GenomeRNAi:64101
NextBio:65940 ArrayExpress:Q9HBW1 Bgee:Q9HBW1 CleanEx:HS_LRRC4
Genevestigator:Q9HBW1 GermOnline:ENSG00000128594 InterPro:IPR026882
PANTHER:PTHR24369:SF9 Uniprot:Q9HBW1
Length = 653
Score = 200 (75.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 72/273 (26%), Positives = 114/273 (41%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+N I I F L L +L L N +R + +F L L L + N T + GAF
Sbjct: 84 ENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAF 143
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L +L L LR + +I AF + L L L + +L+ I L L+ L +
Sbjct: 144 EYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 203
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
G ++ + L L+ LE++G ++ +R G+F IE
Sbjct: 204 GM--CNIKDMPNLTPLVGLEELEMSG-NHFPEIRPGSF-HGLSSLKKLWVMNSQVSLIER 259
Query: 303 GALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWL----REM 356
A GL +L LNL N +S + P L + + NP C C+ILWL RE
Sbjct: 260 NAFDGLASLVELNLAHNNLSSLPHDLFT-PLRYLVELHLHHNPWNCDCDILWLAWWLREY 318
Query: 357 LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
+ +T C++P ++ + L+ + C+
Sbjct: 319 IPTNSTCCGRCHAPMHMRGRYLVEVDQASFQCS 351
Score = 198 (74.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 68/223 (30%), Positives = 107/223 (47%)
Query: 30 NLQEANLDVIPSHSNPSIQRLV---LSTNRIKTVD-SAIPIYLSLQHVDLSHTTWL-IIP 84
NL E N+ +I + + + L L N I+ ++ A SL ++L WL +IP
Sbjct: 81 NLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL-FDNWLTVIP 139
Query: 85 IGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALR 142
G FE KL EL L +N + P + S R+++ ++ I + FEGL L+
Sbjct: 140 SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 199
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
L L ++ +P + + +G L EL + N F + G+F+GL L L + + ++ I
Sbjct: 200 YLNLGMCNIKDMPNLTPL-VG-LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 257
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
NAF GL+ L L L N L S+P + L L EL + N
Sbjct: 258 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
Score = 175 (66.7 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 61/210 (29%), Positives = 100/210 (47%)
Query: 70 LQHVDLSHTTW--LIIPIGGFEPQEKLVELQLNHNKHF-PQQI--VCSIISPRRVEIFGQ 124
L V + H TW +++P Q ++ + PQ VCS + + +
Sbjct: 4 LWQVTVHHHTWNAILLPFVYLTAQVWILCAAIAAAASAGPQNCPSVCSCSNQFSKVVCTR 63
Query: 125 NRISRIDQACFEGLTA-LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+S + Q G+ + R L L +N ++ + +F +L L L++G N + GAF
Sbjct: 64 RGLSEVPQ----GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAF 119
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
NGL L+ L+L LT I AF LS LR L L +N ++SIP+ +++ L L++G
Sbjct: 120 NGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLG 179
Query: 244 Q-NGFSMLEAGCFKGLSYLKRLEITGASNL 272
+ + G F+GL LK L + G N+
Sbjct: 180 ELKKLEYISEGAFEGLFNLKYLNL-GMCNI 208
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 66/234 (28%), Positives = 97/234 (41%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S R L L +N +Q I L LE L++G+N +E G F GL+ L LE+ +
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD-N 133
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESML 329
LT + GAF + I A +P+L L+L E SE
Sbjct: 134 WLTVIPSGAF-EYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEG-- 190
Query: 330 AWPELRTIDIAENPIECG-CNILWLREM--LVRRNTSAVFCNSPAPLKYKSLISLSA-ED 385
A+ L + + G CNI + + LV + N ++ S LS+ +
Sbjct: 191 AFEGLFNLKY----LNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKK 246
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L + ++ I NAF GL+ L L L N L S+P + L L EL + N
Sbjct: 247 LWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 60/247 (24%), Positives = 100/247 (40%)
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
+V T L +P + + TR L + +N M++A F+ L +L+ L++ G +++ ++
Sbjct: 59 VVCTRRGLSEVP-QGIPSNTRY--LNLMENNIQMIQADTFRHLHHLEVLQL-GRNSIRQI 114
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPEL 334
GAF + I GA L L L L+ N S S + P L
Sbjct: 115 EVGAF-NGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSL 173
Query: 335 RTIDIAE-NPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGL 393
+D+ E +E + + + + CN L+ L E+L +G
Sbjct: 174 MRLDLGELKKLEYISEGAF-EGLFNLKYLNLGMCNIKDMPNLTPLVGL--EELEMSGNHF 230
Query: 394 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 453
I +F GLS L+ L + ++++ I L L EL + N S L F L
Sbjct: 231 PEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290
Query: 454 YLKRLEI 460
YL L +
Sbjct: 291 YLVELHL 297
Score = 130 (50.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 67/280 (23%), Positives = 114/280 (40%)
Query: 307 GLP-NLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNI-LWLREMLVRRNTS 363
G+P N +LNL EN +++ L + + N I I + L NT
Sbjct: 72 GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR---QIEVGAFNGLASLNTL 128
Query: 364 AVFCNSPAPLKYKSLISLSA-EDLGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIP 421
+F N + + LS +L + +I AF + L L L + +L+ I
Sbjct: 129 ELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS 188
Query: 422 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 481
L L+ L +G ++ + L L+ LE++G ++ +R G+F
Sbjct: 189 EGAFEGLFNLKYLNLGM--CNIKDMPNLTPLVGLEELEMSG-NHFPEIRPGSF-HGLSSL 244
Query: 482 XXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIE 539
+IE +A GL +L LNL N +S + P L + + NP
Sbjct: 245 KKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT-PLRYLVELHLHHNPWN 303
Query: 540 CGCNILWL----REMLVRRNTSAVFCNSPAPLKYKSLISL 575
C C+ILWL RE + +T C++P ++ + L+ +
Sbjct: 304 CDCDILWLAWWLREYIPTNSTCCGRCHAPMHMRGRYLVEV 343
>ZFIN|ZDB-GENE-040219-7 [details] [associations]
symbol:tlr3 "toll-like receptor 3" species:7955
"Danio rerio" [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0001819 "positive
regulation of cytokine production" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009615 "response to virus" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
ZFIN:ZDB-GENE-040219-7 GO:GO:0016021 GO:GO:0007165 GO:GO:0009617
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005622 GO:GO:0009615 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 SUPFAM:SSF52200 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 EMBL:AY616582 IPI:IPI00510961
UniGene:Dr.82491 ProteinModelPortal:Q6IWL5 STRING:Q6IWL5
InParanoid:Q6IWL5 Uniprot:Q6IWL5
Length = 903
Score = 202 (76.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 129/589 (21%), Positives = 227/589 (38%)
Query: 26 DPSCN-LQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS----LQHVDLSHTTW 80
D S N L A L P P++ LVLS N I + +LS + + LS
Sbjct: 153 DVSRNKLTSAKLGTEPQL--PNLVTLVLSGNNINILQKNDFSFLSNSSSFRVLILSSLIL 210
Query: 81 LIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISP------RRVEIFGQNRISRIDQAC 134
+ G F+ + L +L L+ +K Q S+ R + + +++ +
Sbjct: 211 KKVENGCFKAIDTLYDLVLDSSK-LTSQFTTSLFEELADTALRNLSLKSTEQVT-LSNTT 268
Query: 135 FEGL--TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSAL 192
F+GL T + +L L +N++ + +F +L L L + N L + +F+GLG L L
Sbjct: 269 FQGLEKTKITVLDLSENRISKIVDGAFQWLPQLEFLSLEHNTIRHLTNDSFSGLGNLRQL 328
Query: 193 DLRGA------GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN- 245
+LR A L I D +F+ L L L + + + + + S L L+ L++ +
Sbjct: 329 NLRKALIKSHASLPVIDDFSFQHLVQLEYLCMANTAFRELTEQIFSGLRNLKTLDLSWSI 388
Query: 246 -GFSMLEAGCFKGLS---YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE 301
G + F GL L+ L +TG + ++ GAF+ ++
Sbjct: 389 TGIKTVTNKTFAGLKESPLLQTLNLTGMG-INKLEPGAFSSFGNLSNLLMSRNFINQQLQ 447
Query: 302 EGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRN 361
GL N+ +++ N S S + ++ + T+ I ++ G + +M
Sbjct: 448 GNEFKGLSNIKEIDMSINQ-QSISLTNASFVHVSTLRI----LKLGRALKGTLDM----- 497
Query: 362 TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI- 420
P+P ++ L++L+ DL + + NI+ + GL L+ + + N L +
Sbjct: 498 -------EPSP--FRPLVNLTILDL--SNNNIANINGDLLEGLYNLKVVKMQHNNLARLW 546
Query: 421 -------PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA 473
P L T L L + NG + F+G S L L + G + L ++
Sbjct: 547 KMANPGGPVLFLKDATNLSYLNLDYNGIDEIPPNAFRGFSELHELSLRG-NLLDQLHASV 605
Query: 474 FADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML---AWPELRT 530
F D + V L L L + N F ES+L W
Sbjct: 606 FDDLNSLKYLHLQKNLITSVQRATFGVPLSKLKELYMDHNPFDCTCESILWFSEWLNSTN 665
Query: 531 IDIAENPIECGCNI--LWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA 577
+ P CN + ++ N + C P K ++S +A
Sbjct: 666 TSVPGFPQSYICNTPNAYFNHSVM--NFDPLSCKDMTPFKALYILSSTA 712
Score = 159 (61.0 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 113/518 (21%), Positives = 204/518 (39%)
Query: 25 RDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP 84
++ + NLD IP+ +I L +S NR+KT+ S++ +Y +L ++D S+ +
Sbjct: 34 KNAKADCSHMNLDAIPTDLPTNITTLDVSHNRLKTL-SSLHMYTNLVNIDASYNS----- 87
Query: 85 IGGFEPQE--KLVELQ-LN--HNKHF--PQQIVCSIISPRRVEIFGQNRISRIDQACFEG 137
+ G E L LQ LN HN+ + ++ + + ++++ N++ ++ F
Sbjct: 88 LAGIEKDLCLSLPHLQFLNAQHNQVYLISEKDLKNCFHLTQLDL-SDNKL-KLQGEPFSL 145
Query: 138 LTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA---LDL 194
L L L + N+L S + L L L + N L F+ L S+ L L
Sbjct: 146 LKNLTWLDVSRNKLTSAKLGTEPQLPNLVTLVLSGNNINILQKNDFSFLSNSSSFRVLIL 205
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQS-IPTKQLSKL--TRLEELEIGQNGFSMLE 251
L + + F+ + L LVL ++L S T +L T L L + L
Sbjct: 206 SSLILKKVENGCFKAIDTLYDLVLDSSKLTSQFTTSLFEELADTALRNLSLKSTEQVTLS 265
Query: 252 AGCFKGLSYLKRLEITGASN-LTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
F+GL K + + N ++++ GAF + + GL N
Sbjct: 266 NTTFQGLEKTKITVLDLSENRISKIVDGAF-QWLPQLEFLSLEHNTIRHLTNDSFSGLGN 324
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSP 370
L LNL++ S + S+ + + + C N + RE+ T +F
Sbjct: 325 LRQLNLRKALIKSHA-SLPVIDDFSFQHLVQLEYLCMANTAF-REL-----TEQIF---- 373
Query: 371 APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG---LRSLVLTDNRLQSIPTKQLSK 427
L +L DL + G+ +++ F GL L++L LT + + S
Sbjct: 374 -----SGLRNLKTLDLSWSITGIKTVTNKTFAGLKESPLLQTLNLTGMGINKLEPGAFSS 428
Query: 428 LTRLEELEIGQNGFSM-LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 486
L L + +N + L+ FKGLS +K ++++ + +F
Sbjct: 429 FGNLSNLLMSRNFINQQLQGNEFKGLSNIKEIDMSINQQSISLTNASFVHVSTLRILKLG 488
Query: 487 XXXXXXI-IEEDALVGLPNLYHLNLKENAFTSFSESML 523
+ +E L NL L+L N + + +L
Sbjct: 489 RALKGTLDMEPSPFRPLVNLTILDLSNNNIANINGDLL 526
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 91/338 (26%), Positives = 143/338 (42%)
Query: 110 VCSIISPRRVEIFGQNRISRIDQACFEGLTA-LRILYLDDNQLRSVPTPSFIYLGMLAEL 168
VC S + + G ++ + GL +L L N+L + L +L EL
Sbjct: 34 VCDCTSQPQAVLCGHRQLEAVPG----GLPLDTELLDLSGNRLWGLQQGMLSRLSLLQEL 89
Query: 169 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 228
+ N +TL GAF+GL L L L+G L + F GLS L L L N++
Sbjct: 90 DLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLD 149
Query: 229 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXX 288
+L L++LE+G N + G F GL+ L L + NL+ V A A
Sbjct: 150 GAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERC-NLSTVPGLALA-RLPALV 207
Query: 289 XXXXXXXXXXXIEEGALVGLPNLYHLNLKE-NAFTSFSESMLAWPELRTIDIAE-N---- 342
+ GAL GL L L + + + L L ++ I N
Sbjct: 208 ALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGLNLSSLAITRCNLSSV 267
Query: 343 PIECGCNILWLREMLVRRNT-SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAF 401
P + ++ +LR + + +N SA+ PA + L+ L ++L +GA LT+I+ +AF
Sbjct: 268 PFQALYHLSFLRVLDLSQNPISAI----PAR-RLSPLVRL--QELRLSGACLTSIAAHAF 320
Query: 402 RGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
GL+ L + DN LQ++ +L L + N
Sbjct: 321 HGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGN 358
Score = 193 (73.0 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 59/196 (30%), Positives = 91/196 (46%)
Query: 71 QHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRI 130
Q V H +P GG +L++L N Q ++ + + +++ N++S +
Sbjct: 42 QAVLCGHRQLEAVP-GGLPLDTELLDLSGNRLWGLQQGMLSRLSLLQELDL-SYNQLSTL 99
Query: 131 DQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 190
+ F GL +L L L N+LR + F L L L + LN DGAF LG L
Sbjct: 100 EPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQ 159
Query: 191 ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L++ L ++ AF GL+ L +L L L ++P L++L L L + + L
Sbjct: 160 KLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALRLRELDIGRL 219
Query: 251 EAGCFKGLSYLKRLEI 266
AG +GL LK LEI
Sbjct: 220 PAGALRGLGQLKELEI 235
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 90/355 (25%), Positives = 145/355 (40%)
Query: 36 LDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSL-QHVDLSHTTWLIIPIGGFEPQEKL 94
L+ +P + L LS NR+ + + LSL Q +DLS+ + G F + L
Sbjct: 51 LEAVPGGLPLDTELLDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSL 110
Query: 95 VELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRS 153
+ L+L N+ V S +S + N+I F L +L+ L + DN L
Sbjct: 111 LTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVF 170
Query: 154 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGL 213
V +F L L+ L + +T+ A L L AL LR + + A RGL L
Sbjct: 171 VAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGALRGLGQL 230
Query: 214 RSLVL-TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
+ L + L+++ L L L L I + S + LS+L+ L+++ N
Sbjct: 231 KELEIHLWPSLEALDPGSLVGLN-LSSLAITRCNLSSVPFQALYHLSFLRVLDLS--QNP 287
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP 332
I A GL + L++ +NA + E+ P
Sbjct: 288 ISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSP 347
Query: 333 E-LRTIDIAENPIECGCNILWLREMLVRRNT----SAVFCNSPAPLKYKSLISLS 382
+ L T+ ++ NP+ C C +LWL + +RR+ S C P ++ KSL S
Sbjct: 348 DKLVTLRLSGNPLTCDCRLLWL--LRLRRHLDFGMSPPACAGPHHVQGKSLKEFS 400
Score = 168 (64.2 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 77/290 (26%), Positives = 119/290 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL G L + LS L+ L L+ N+L ++ L L L + N ++
Sbjct: 65 LDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMG 124
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L L++ + + GAF + + GA GL L
Sbjct: 125 PGVFSGLSALTLLDLR-LNQIVLFLDGAFGELGSLQKLEVGDNHLVF-VAPGAFAGLAKL 182
Query: 312 YHLNLKE-NAFTSFSESMLAWP-----ELRTIDIAENPIECGCNILWLREMLVRRNTSAV 365
L L+ N T ++ P LR +DI P + L+E+ +
Sbjct: 183 STLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIH------ 236
Query: 366 FCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 425
S L SL+ L+ L L+++ A LS LR L L+ N + +IP ++L
Sbjct: 237 LWPSLEALDPGSLVGLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRL 296
Query: 426 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN-LTRVRKGAF 474
S L RL+EL + + + A F GL+ L++ A N L + + AF
Sbjct: 297 SPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDV--ADNALQTLEETAF 344
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 75/263 (28%), Positives = 118/263 (44%)
Query: 26 DPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIP 84
D S N Q + L+ H S+ L L NR++ + + LS L +DL ++
Sbjct: 90 DLSYN-QLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFL 148
Query: 85 IGGFEPQEKLVELQLNHNKHF----PQQIV-CSIISPRRVEIFGQNRISRIDQACFEGLT 139
G F L +L++ N H P + +S +E + + + A L
Sbjct: 149 DGAFGELGSLQKLEVGDN-HLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALV 207
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL-NVFTTLADGAFNGLGRLSALDLRGAG 198
ALR+ LD +L P + LG L EL + L L G+ GL LS+L +
Sbjct: 208 ALRLRELDIGRL---PAGALRGLGQLKELEIHLWPSLEALDPGSLVGLN-LSSLAITRCN 263
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
L+++ A LS LR L L+ N + +IP ++LS L RL+EL + + + A F GL
Sbjct: 264 LSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGL 323
Query: 259 SYLKRLEITGASN-LTRVRKGAF 280
+ L++ A N L + + AF
Sbjct: 324 TAFHLLDV--ADNALQTLEETAF 344
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 85/335 (25%), Positives = 140/335 (41%)
Query: 116 PRRVEIFGQNRISRIDQACF----EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170
P R E Q+R + F EG+ T R+L L N+++++ F L EL +
Sbjct: 37 PPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL 96
Query: 171 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 230
N+ + + GAFN L L L LR L I F GLS L L +++N++ +
Sbjct: 97 NENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYM 156
Query: 231 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 290
L L+ LE+G N + F GL+ L++L + NLT + A +
Sbjct: 157 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC-NLTSIPTEALSHLHGLIVLR 215
Query: 291 XXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCN 349
I + LY L + E + + ++M P L +++ I CN
Sbjct: 216 LRHLNINA-IRD---YSFKRLYRLKVLEISHWPYLDTMT--PNCLYGLNLTSLSIT-HCN 268
Query: 350 ILWLREMLVRRNTSAVFCN---SPAPLKYKSLIS--LSAEDLGCAGAGLTNISDNAFRGL 404
+ + + VR F N +P S++ L +++ G L + AFRGL
Sbjct: 269 LTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 328
Query: 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ LR L ++ N+L ++ + LE L + N
Sbjct: 329 NYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 363
Score = 186 (70.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 60/193 (31%), Positives = 85/193 (44%)
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQAC 134
L H + G + +L++L N K Q S +E+ +N +S ++
Sbjct: 50 LCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL-NENIVSAVEPGA 108
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F L LR L L N+L+ +P F L L +L + N L D F L L +L++
Sbjct: 109 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 168
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
L IS AF GL+ L L L L SIPT+ LS L L L + + +
Sbjct: 169 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 228
Query: 255 FKGLSYLKRLEIT 267
FK L LK LEI+
Sbjct: 229 FKRLYRLKVLEIS 241
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 76/288 (26%), Positives = 133/288 (46%)
Query: 2 LVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVI-PSHSNP--SIQRLVLSTNRIK 58
L+D G+ R K +N E + F + L E + + P N +++ L L +NR+K
Sbjct: 69 LLDLGKN-RIKTLNQDEFASFPHLE-ELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 126
Query: 59 TVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIIS 115
+ + LS L +D+S +I+ F+ L L++ N + + + S
Sbjct: 127 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 186
Query: 116 PRRVEIFGQNRISRIDQAC--FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-L 172
++ + N S +A GL LR+ +L+ N +R SF L L L +
Sbjct: 187 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY---SFKRLYRLKVLEISHW 243
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
T+ GL L++L + LT + A R L LR L L+ N + +I L
Sbjct: 244 PYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLH 302
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 303 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 349
Score = 158 (60.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL + ++ + F L L L +N + ++ + L L L + N ++
Sbjct: 70 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 129
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 130 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHRAFSGLNSL 187
Query: 312 YHLNLKENAFTSFSESMLAWPE----LRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L L++ TS L+ LR + N I + L + V + +
Sbjct: 188 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVLEISHWPYL 246
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
++ P L L+ L LT + A R L LR L L+ N + +I L +
Sbjct: 247 DTMTP---NCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHE 303
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 304 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 349
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 81/363 (22%), Positives = 138/363 (38%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R+++ R ++P + + TRL L++G+N L F +L+ LE+ + ++
Sbjct: 47 RAVLCHRKRFVAVP-EGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELN-ENIVS 102
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WP 332
V GAF + I G GL NL L++ EN + M
Sbjct: 103 AVEPGAF-NNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 161
Query: 333 ELRTIDIAENPIE-------CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385
L+++++ +N + G N L E L + + A LI L
Sbjct: 162 NLKSLEVGDNDLVYISHRAFSGLNSL---EQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 218
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L + I D +F+ L L+ L ++ L ++ L L L L I + +
Sbjct: 219 LN-----INAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAV 272
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
+ L YL+ L ++ N +G+ ++E A GL
Sbjct: 273 PYLAVRHLVYLRFLNLS--YNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 330
Query: 505 LYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFC 561
L LN+ N T+ ES + L T+ + NP+ C C +LW+ R + N C
Sbjct: 331 LRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 390
Query: 562 NSP 564
+P
Sbjct: 391 ATP 393
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 85/335 (25%), Positives = 140/335 (41%)
Query: 116 PRRVEIFGQNRISRIDQACF----EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170
P R E Q+R + F EG+ T R+L L N+++++ F L EL +
Sbjct: 43 PPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL 102
Query: 171 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 230
N+ + + GAFN L L L LR L I F GLS L L +++N++ +
Sbjct: 103 NENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYM 162
Query: 231 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 290
L L+ LE+G N + F GL+ L++L + NLT + A +
Sbjct: 163 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC-NLTSIPTEALSHLHSLIVLR 221
Query: 291 XXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCN 349
I + LY L + E + + ++M P L +++ I CN
Sbjct: 222 LRHLNINA-IRD---YSFKRLYRLKVLEISHWPYLDTMT--PNCLYGLNLTSLSIT-HCN 274
Query: 350 ILWLREMLVRRNTSAVFCN---SPAPLKYKSLIS--LSAEDLGCAGAGLTNISDNAFRGL 404
+ + + VR F N +P S++ L +++ G L + AFRGL
Sbjct: 275 LTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 334
Query: 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ LR L ++ N+L ++ + LE L + N
Sbjct: 335 NYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 369
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 60/193 (31%), Positives = 86/193 (44%)
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQAC 134
L H + G + +L++L N K Q S +E+ +N +S ++
Sbjct: 56 LCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL-NENIVSAVEPGA 114
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F L +LR L L N+L+ +P F L L +L + N L D F L L +L++
Sbjct: 115 FNNLFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 174
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
L IS AF GL+ L L L L SIPT+ LS L L L + + +
Sbjct: 175 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYS 234
Query: 255 FKGLSYLKRLEIT 267
FK L LK LEI+
Sbjct: 235 FKRLYRLKVLEIS 247
Score = 160 (61.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 76/288 (26%), Positives = 132/288 (45%)
Query: 2 LVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVI-PSHSNP--SIQRLVLSTNRIK 58
L+D G+ R K +N E + F + L E + + P N S++ L L +NR+K
Sbjct: 75 LLDLGKN-RIKTLNQDEFASFPHLE-ELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLK 132
Query: 59 TVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIIS 115
+ + LS L +D+S +I+ F+ L L++ N + + + S
Sbjct: 133 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 192
Query: 116 PRRVEIFGQNRISRIDQAC--FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-L 172
++ + N S +A L LR+ +L+ N +R SF L L L +
Sbjct: 193 LEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDY---SFKRLYRLKVLEISHW 249
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
T+ GL L++L + LT + A R L LR L L+ N + +I L
Sbjct: 250 PYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLH 308
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 309 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 355
Score = 157 (60.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL + ++ + F L L L +N + ++ + L L L + N ++
Sbjct: 76 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIP 135
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 136 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHRAFSGLNSL 193
Query: 312 YHLNLKENAFTSFSESMLAWPE----LRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L L++ TS L+ LR + N I + L + V + +
Sbjct: 194 EQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIR-DYSFKRLYRLKVLEISHWPYL 252
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
++ P L L+ L LT + A R L LR L L+ N + +I L +
Sbjct: 253 DTMTP---NCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHE 309
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 310 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 355
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 82/363 (22%), Positives = 139/363 (38%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R+++ R ++P + + TRL L++G+N L F +L+ LE+ + ++
Sbjct: 53 RAVLCHRKRFVAVP-EGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELN-ENIVS 108
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WP 332
V GAF + I G GL NL L++ EN + M
Sbjct: 109 AVEPGAF-NNLFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 167
Query: 333 ELRTIDIAENPIE-------CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385
L+++++ +N + G N L E L + + A SLI L
Sbjct: 168 NLKSLEVGDNDLVYISHRAFSGLNSL---EQLTLEKCNLTSIPTEALSHLHSLIVLRLRH 224
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L + I D +F+ L L+ L ++ L ++ L L L L I + +
Sbjct: 225 LN-----INAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAV 278
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
+ L YL+ L ++ N +G+ ++E A GL
Sbjct: 279 PYLAVRHLVYLRFLNLS--YNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 505 LYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFC 561
L LN+ N T+ ES + L T+ + NP+ C C +LW+ R + N C
Sbjct: 337 LRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 396
Query: 562 NSP 564
+P
Sbjct: 397 ATP 399
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 85/335 (25%), Positives = 140/335 (41%)
Query: 116 PRRVEIFGQNRISRIDQACF----EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170
P R E Q+R + F EG+ T R+L L N+++++ F L EL +
Sbjct: 43 PPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL 102
Query: 171 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 230
N+ + + GAFN L L L LR L I F GLS L L +++N++ +
Sbjct: 103 NENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYM 162
Query: 231 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 290
L L+ LE+G N + F GL+ L++L + NLT + A +
Sbjct: 163 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC-NLTSIPTEALSHLHGLIVLR 221
Query: 291 XXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCN 349
I + LY L + E + + ++M P L +++ I CN
Sbjct: 222 LRHLNINA-IRD---YSFKRLYRLKVLEISHWPYLDTMT--PNCLYGLNLTSLSIT-HCN 274
Query: 350 ILWLREMLVRRNTSAVFCN---SPAPLKYKSLIS--LSAEDLGCAGAGLTNISDNAFRGL 404
+ + + VR F N +P S++ L +++ G L + AFRGL
Sbjct: 275 LTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 334
Query: 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ LR L ++ N+L ++ + LE L + N
Sbjct: 335 NYLRVLNVSGNQLTTLEESAFHSVGNLETLILDSN 369
Score = 186 (70.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 60/193 (31%), Positives = 85/193 (44%)
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQAC 134
L H + G + +L++L N K Q S +E+ +N +S ++
Sbjct: 56 LCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL-NENIVSAVEPGA 114
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F L LR L L N+L+ +P F L L +L + N L D F L L +L++
Sbjct: 115 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 174
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
L IS AF GL+ L L L L SIPT+ LS L L L + + +
Sbjct: 175 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 234
Query: 255 FKGLSYLKRLEIT 267
FK L LK LEI+
Sbjct: 235 FKRLYRLKVLEIS 247
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 76/288 (26%), Positives = 133/288 (46%)
Query: 2 LVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVI-PSHSNP--SIQRLVLSTNRIK 58
L+D G+ R K +N E + F + L E + + P N +++ L L +NR+K
Sbjct: 75 LLDLGKN-RIKTLNQDEFASFPHLE-ELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 132
Query: 59 TVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIIS 115
+ + LS L +D+S +I+ F+ L L++ N + + + S
Sbjct: 133 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 192
Query: 116 PRRVEIFGQNRISRIDQAC--FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-L 172
++ + N S +A GL LR+ +L+ N +R SF L L L +
Sbjct: 193 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY---SFKRLYRLKVLEISHW 249
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
T+ GL L++L + LT + A R L LR L L+ N + +I L
Sbjct: 250 PYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLH 308
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 309 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 355
Score = 158 (60.7 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 70/287 (24%), Positives = 120/287 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL + ++ + F L L L +N + ++ + L L L + N ++
Sbjct: 76 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 135
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 136 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHRAFSGLNSL 193
Query: 312 YHLNLKENAFTSFSESMLAWPE----LRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L L++ TS L+ LR + N I + L + V + +
Sbjct: 194 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVLEISHWPYL 252
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
++ P L L+ L LT + A R L LR L L+ N + +I L +
Sbjct: 253 DTMTP---NCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIEGSMLHE 309
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L RL+E+++ +++E F+GL+YL+ L ++G + LT + + AF
Sbjct: 310 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESAF 355
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 81/363 (22%), Positives = 138/363 (38%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R+++ R ++P + + TRL L++G+N L F +L+ LE+ + ++
Sbjct: 53 RAVLCHRKRFVAVP-EGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELN-ENIVS 108
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WP 332
V GAF + I G GL NL L++ EN + M
Sbjct: 109 AVEPGAF-NNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 167
Query: 333 ELRTIDIAENPIE-------CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385
L+++++ +N + G N L E L + + A LI L
Sbjct: 168 NLKSLEVGDNDLVYISHRAFSGLNSL---EQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 224
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L + I D +F+ L L+ L ++ L ++ L L L L I + +
Sbjct: 225 LN-----INAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAV 278
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
+ L YL+ L ++ N +G+ ++E A GL
Sbjct: 279 PYLAVRHLVYLRFLNLS--YNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 505 LYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFC 561
L LN+ N T+ ES + L T+ + NP+ C C +LW+ R + N C
Sbjct: 337 LRVLNVSGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 396
Query: 562 NSP 564
+P
Sbjct: 397 ATP 399
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 85/335 (25%), Positives = 140/335 (41%)
Query: 116 PRRVEIFGQNRISRIDQACF----EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170
P R E Q+R + F EG+ T R+L L N+++++ F L EL +
Sbjct: 43 PPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL 102
Query: 171 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 230
N+ + + GAFN L L L LR L I F GLS L L +++N++ +
Sbjct: 103 NENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYM 162
Query: 231 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 290
L L+ LE+G N + F GL+ L++L + NLT + A +
Sbjct: 163 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC-NLTSIPTEALSHLHGLIVLR 221
Query: 291 XXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIECGCN 349
I + LY L + E + + ++M P L +++ I CN
Sbjct: 222 LRHLNINA-IRD---YSFKRLYRLKVLEISHWPYLDTMT--PNCLYGLNLTSLSIT-HCN 274
Query: 350 ILWLREMLVRRNTSAVFCN---SPAPLKYKSLIS--LSAEDLGCAGAGLTNISDNAFRGL 404
+ + + VR F N +P S++ L +++ G L + AFRGL
Sbjct: 275 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 334
Query: 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
+ LR L ++ N+L ++ + LE L + N
Sbjct: 335 NYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 369
Score = 186 (70.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 60/193 (31%), Positives = 85/193 (44%)
Query: 75 LSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQAC 134
L H + G + +L++L N K Q S +E+ +N +S ++
Sbjct: 56 LCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELEL-NENIVSAVEPGA 114
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
F L LR L L N+L+ +P F L L +L + N L D F L L +L++
Sbjct: 115 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 174
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
L IS AF GL+ L L L L SIPT+ LS L L L + + +
Sbjct: 175 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYS 234
Query: 255 FKGLSYLKRLEIT 267
FK L LK LEI+
Sbjct: 235 FKRLYRLKVLEIS 247
Score = 161 (61.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 75/288 (26%), Positives = 132/288 (45%)
Query: 2 LVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVI-PSHSNP--SIQRLVLSTNRIK 58
L+D G+ R K +N E + F + L E + + P N +++ L L +NR+K
Sbjct: 75 LLDLGKN-RIKTLNQDEFASFPHLE-ELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 132
Query: 59 TVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIIS 115
+ + LS L +D+S +I+ F+ L L++ N + + + S
Sbjct: 133 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 192
Query: 116 PRRVEIFGQNRISRIDQAC--FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-L 172
++ + N S +A GL LR+ +L+ N +R SF L L L +
Sbjct: 193 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY---SFKRLYRLKVLEISHW 249
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
T+ GL L++L + LT + A R L LR L L+ N + +I L
Sbjct: 250 PYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLH 308
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+L RL+E+++ +++E F+GL+YL+ L ++G + LT + + F
Sbjct: 309 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESVF 355
Score = 156 (60.0 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 69/287 (24%), Positives = 119/287 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL + ++ + F L L L +N + ++ + L L L + N ++
Sbjct: 76 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 135
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 136 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHRAFSGLNSL 193
Query: 312 YHLNLKENAFTSFSESMLAWPE----LRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L L++ TS L+ LR + N I + L + V + +
Sbjct: 194 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVLEISHWPYL 252
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
++ P L L+ L LT + A R L LR L L+ N + +I L +
Sbjct: 253 DTMTP---NCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 309
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L RL+E+++ +++E F+GL+YL+ L ++G + LT + + F
Sbjct: 310 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG-NQLTTLEESVF 355
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 81/363 (22%), Positives = 139/363 (38%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R+++ R ++P + + TRL L++G+N L F +L+ LE+ + ++
Sbjct: 53 RAVLCHRKRFVAVP-EGIPTETRL--LDLGKNRIKTLNQDEFASFPHLEELELN-ENIVS 108
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WP 332
V GAF + I G GL NL L++ EN + M
Sbjct: 109 AVEPGAF-NNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 167
Query: 333 ELRTIDIAENPIE-------CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 385
L+++++ +N + G N L E L + + A LI L
Sbjct: 168 NLKSLEVGDNDLVYISHRAFSGLNSL---EQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 224
Query: 386 LGCAGAGLTNISDNAFRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L + I D +F+ L L+ L ++ L ++ L L L L I + +
Sbjct: 225 LN-----INAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAV 278
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
+ L YL+ L ++ N +G+ ++E A GL
Sbjct: 279 PYLAVRHLVYLRFLNLS--YNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 336
Query: 505 LYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFC 561
L LN+ N T+ ES+ + L T+ + NP+ C C +LW+ R + N C
Sbjct: 337 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 396
Query: 562 NSP 564
+P
Sbjct: 397 ATP 399
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 197 (74.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 81/359 (22%), Positives = 149/359 (41%)
Query: 47 IQRLVLSTNRIKTVDS-AIPIYLSLQHVDLS-HTTWLIIPIGGFEPQEKLVELQLNHNK- 103
+ +LV +K+V A + L+ +++S + W+ + I F L L LN+NK
Sbjct: 75 LSKLVFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNLTRLLLNNNKL 134
Query: 104 -HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ S+ +++ G N +S + F+ L L+ L L NQ+ S+ T F
Sbjct: 135 SGVDAGLFHSLHQLEMLQLRG-NGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNN 193
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N L DG F L L L+LR + ++ +F + L++L+L N
Sbjct: 194 SELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFP--ASLKTLILKKNL 251
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L+ + L + L++ QN + + A F+ L L+ L+++ N G+
Sbjct: 252 LEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLS--ENRISTLAGSVFK 309
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTI-DIAE 341
++ L +L L+L N+ S + + + ++
Sbjct: 310 GLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDLDFQCVFELRG 369
Query: 342 NPIECGCNILWLREMLVR-----RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTN 395
NP C C I + + L ++ S V C +P ++ +L S+ E L C+ +N
Sbjct: 370 NPWSCDCGIHYFYDWLKYNHKHVKDLSRVSCEAPELIQGHNLRSVDREQLVCSRNSSSN 428
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 80/363 (22%), Positives = 158/363 (43%)
Query: 109 IVCSIISPRRVEIFGQNRI----SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
+ C + P + F +++ R+ T +R L + + + + SF
Sbjct: 15 LYCGVCCPEPCQCFSGSKLVCSDDRMKSLPVNISTQVRELIVVASGIPDLDQQSFPETLR 74
Query: 165 LAELRVGLN-VFTTLADGAFNGLGRLSALDLRG-AGLTNISDNAFRGLSGLRSLVLTDNR 222
L++L V LN + +++ AF L L L++ G ++ F L+ L L+L +N+
Sbjct: 75 LSKL-VFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNLTRLLLNNNK 133
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 282
L + L +LE L++ NG S L F+ L L+ L+++ + ++ + F +
Sbjct: 134 LSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLS-FNQISSLSTELFQN 192
Query: 283 XXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP-ELRTIDIAE 341
+ +G L +L LNL+ N + ++P L+T+ + +
Sbjct: 193 NSELRVLSLQANKIPN-LPDGIFTHLDHLQELNLRSNLIRVLTPG--SFPASLKTLILKK 249
Query: 342 NPIECGCNILW--LREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
N +E N ++ L + + PA L +++LISL DL + ++ ++ +
Sbjct: 250 NLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADL-FQNLISLETLDL--SENRISTLAGS 306
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
F+GL ++S+ L N L S+ L L+ L++ N + +G F+ L + E
Sbjct: 307 VFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDLDFQCVFE 366
Query: 460 ITG 462
+ G
Sbjct: 367 LRG 369
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 64/259 (24%), Positives = 118/259 (45%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP-IG 86
S N+ +LD+ S ++ RL+L+ N++ VD+ + + SL +++ + +
Sbjct: 105 SGNICWMSLDIQTFSSLTNLTRLLLNNNKLSGVDAGL--FHSLHQLEMLQLRGNGLSFLS 162
Query: 87 G--FEPQEKLVELQLNHNKHFPQQI-VCSIISPRRVEIFGQNRISRIDQACFEGLTALRI 143
G F+ +L EL L+ N+ + S RV N+I + F L L+
Sbjct: 163 GRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQE 222
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L L N +R V TP + L L + N+ L + F+ L ++ LDL LT +
Sbjct: 223 LNLRSNLIR-VLTPGS-FPASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVP 280
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ F+ L L +L L++NR+ ++ L ++ + + +N ++A K L+
Sbjct: 281 ADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLISVDAHLLKDQHDLQL 340
Query: 264 LEITGASNLTRVRKGAFAD 282
L+++ S L + G F D
Sbjct: 341 LDLSNNS-LRSIPSGFFED 358
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 77/349 (22%), Positives = 141/349 (40%)
Query: 134 CFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALD 193
CF G L D++++S+P + EL V + L +F RLS L
Sbjct: 27 CFSGSK----LVCSDDRMKSLPVNIST---QVRELIVVASGIPDLDQQSFPETLRLSKLV 79
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRL-QSIPTKQLSKLTRLEELEIGQNGFSMLEA 252
L ++S AF L LR L ++ N S+ + S LT L L + N S ++A
Sbjct: 80 FLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLTNLTRLLLNNNKLSGVDA 139
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
G F L L+ L++ G + L+ + G + L
Sbjct: 140 GLFHSLHQLEMLQLRG-NGLSFL-SGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELR 197
Query: 313 HLNLKENAFTSFSESMLAWPE-LRTIDIAENPIEC---GCNILWLREMLVRRNTSAVFCN 368
L+L+ N + + + + L+ +++ N I G L+ +++++N N
Sbjct: 198 VLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFPASLKTLILKKNLLEKLTN 257
Query: 369 SPA-PLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
+ L Y + + LS L T + + F+ L L +L L++NR+ ++
Sbjct: 258 AVFHTLHYITYLDLSQNSL-------TEVPADLFQNLISLETLDLSENRISTLAGSVFKG 310
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFAD 476
L ++ + + +N ++A K L+ L+++ S L + G F D
Sbjct: 311 LFSIKSVYLQKNSLISVDAHLLKDQHDLQLLDLSNNS-LRSIPSGFFED 358
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 55/230 (23%), Positives = 94/230 (40%)
Query: 42 HSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLN 100
HS ++ L L N + + + L LQ +DLS + F+ +L L L
Sbjct: 143 HSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLSTELFQNNSELRVLSLQ 202
Query: 101 HNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 158
NK + P I + + + + N I + F +L+ L L N L +
Sbjct: 203 ANKIPNLPDGIFTHLDHLQELNL-RSNLIRVLTPGSFPA--SLKTLILKKNLLEKLTNAV 259
Query: 159 FIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVL 218
F L + L + N T + F L L LDL ++ ++ + F+GL ++S+ L
Sbjct: 260 FHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYL 319
Query: 219 TDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
N L S+ L L+ L++ N + +G F+ L + E+ G
Sbjct: 320 QKNSLISVDAHLLKDQHDLQLLDLSNNSLRSIPSGFFEDLDFQCVFELRG 369
>UNIPROTKB|Q5F4C4 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0000164 "protein phosphatase
type 1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 PANTHER:PTHR23155:SF38 EMBL:AJ851376
IPI:IPI00600917 RefSeq:NP_001026407.1 UniGene:Gga.42449
ProteinModelPortal:Q5F4C4 GeneID:423894 KEGG:gga:423894
NextBio:20826295 Uniprot:Q5F4C4
Length = 529
Score = 197 (74.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 100/418 (23%), Positives = 180/418 (43%)
Query: 30 NLQEANLDVIPSHSNPSIQ--RLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG 87
+L + ++ ++PS Q L L +N+++++ + + ++L + LS + +P
Sbjct: 106 DLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLP-DS 164
Query: 88 FEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILY 145
+ +KL L L HNK P +V + S + + NRI+ +++ + L+ L +L
Sbjct: 165 LDNLKKLRMLDLRHNKLREIPS-VVYRLTSLATLYL-RFNRITTVEKD-IKTLSKLTMLS 221
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
+ +N+++ +P L L L V N L + +++ LDL+ L ++ +
Sbjct: 222 IRENKIKQLPA-EIGELCNLITLDVAHNQLEHLPE-EIGSCTQITNLDLQHNELLDLPET 279
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
LS L L L NRL +IP K L+K + L+EL + N S L G L +K
Sbjct: 280 -IGNLSSLSRLGLRYNRLSAIP-KSLAKCSELDELNLENNNISTLPEGLLSSL--VKLTS 335
Query: 266 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS 325
+T A N + I G L LN+K+N TS
Sbjct: 336 LTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 395
Query: 326 ESMLAWPELRTIDIAENPI----ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISL 381
W + +++A N + E ++ L +++ N + L+ + L
Sbjct: 396 LDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDL 455
Query: 382 SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
L L N + A+ L L+ LVLT+N+L ++P + + LT L L +G+N
Sbjct: 456 EENKL----ESLPN--EIAY--LKDLQKLVLTNNQLTTLP-RGIGHLTNLTHLGLGEN 504
>FB|FBgn0033250 [details] [associations]
symbol:CG14762 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GeneTree:ENSGT00700000104056
EMBL:AY060601 RefSeq:NP_610346.1 UniGene:Dm.3950 SMR:Q7K2X5
EnsemblMetazoa:FBtr0088867 GeneID:35768 KEGG:dme:Dmel_CG14762
UCSC:CG14762-RA FlyBase:FBgn0033250 InParanoid:Q7K2X5
OrthoDB:EOG4N8PM4 GenomeRNAi:35768 NextBio:795128 Uniprot:Q7K2X5
Length = 470
Score = 196 (74.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 58/219 (26%), Positives = 102/219 (46%)
Query: 44 NPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIP---IGGFEPQEKLVELQLN 100
+P I L L N + + + + L ++H+ + +++ I + +++ LN
Sbjct: 80 SPIIFYLKLRHNNLPKLQGFVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLN 139
Query: 101 HNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
K P Q + + + + N+I+ I FEGL L IL L +N++ + +F
Sbjct: 140 QMKTVPSQALQHLFHLLILNL-NHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFR 198
Query: 161 YL-GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
L + L +G N T + A + L L L+++ + IS+ F GL L SL+L
Sbjct: 199 GLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILA 258
Query: 220 DNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
N + ++P S LT L LE+ N S+++ FKGL
Sbjct: 259 HNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGL 297
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 64/228 (28%), Positives = 99/228 (43%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N++ + + L L IL L+ N++ + +F L L L + N T + AF
Sbjct: 139 NQMKTVPSQALQHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFR 198
Query: 185 GL-GRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
GL + L+L G LTNI A LS L+ L + +N++++I L L+ L +
Sbjct: 199 GLEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILA 258
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
N + + A F L+ L LE+ G + ++ + K AF I
Sbjct: 259 HNMITTVPANVFSHLTLLNSLELEG-NKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSE 317
Query: 304 ALVGLPNLYHLNLKEN--------AFTSFSESMLAWPELRTIDIAENP 343
AL L L HL+L+ N AFT F +S L + L+ DI P
Sbjct: 318 ALRPLHRLRHLDLRNNNINVLAEDAFTGFGDS-LTFLNLQKNDIKVLP 364
Score = 147 (56.8 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 64/284 (22%), Positives = 111/284 (39%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESMLAWPE--LRTIDIAENPI----ECGCNIL-W 352
I A GL L L L EN T E ++ +++ N + + +IL
Sbjct: 168 IHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILST 227
Query: 353 LREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVL 412
L+++ ++ N ++ L SL + L A +T + N F L+ L SL L
Sbjct: 228 LKKLEIQENKIRTISEGD----FEGLQSL--DSLILAHNMITTVPANVFSHLTLLNSLEL 281
Query: 413 TDNRLQSIPTKQLSKLTR-LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 471
N++ I L L+ L +G N + + + L L+ L++ +N+ + +
Sbjct: 282 EGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRN-NNINVLAE 340
Query: 472 GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML--AWPELR 529
AF ++ L +L LNL+ N + ++ LR
Sbjct: 341 DAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIMEPVIDTLR 400
Query: 530 TIDIAENPIECGCNILWLREMLVR-RNTSAVFCNSPAPLKYKSL 572
IDI +NP+ C C + W ++L +N PL + SL
Sbjct: 401 IIDITDNPLNCSCELTWFPKLLEDLKNKDDEMSQKKKPLCHMSL 444
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 73/308 (23%), Positives = 122/308 (39%)
Query: 240 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXX 299
L++ N L+ F L ++ L I +S L + + A +
Sbjct: 86 LKLRHNNLPKLQGFVFLALD-IRHLTIHNSS-LAAIEENALSSLGAGLTQLDVSLNQMKT 143
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIA---ENPI-ECGCNIL-WLR 354
+ AL L +L LNL N T + A+ L T++I EN I + L
Sbjct: 144 VPSQALQHLFHLLILNLNHNKITVIHNN--AFEGLETLEILTLYENKITQIDPEAFRGLE 201
Query: 355 EMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
+ + R N + P K S++S + + L + IS+ F GL L SL+L
Sbjct: 202 DHIKRLNLGGNDLTN-IPQKALSILS-TLKKLEIQENKIRTISEGDFEGLQSLDSLILAH 259
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY-LKRLEITGASNLTRVRKGA 473
N + ++P S LT L LE+ N S+++ FKGL L+ L + G + + + A
Sbjct: 260 NMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRL-GDNQIHTIPSEA 318
Query: 474 FADXXXXXXXXXXXXXXXXIIEEDALVGL-PNLYHLNLKENAFTSFSESMLA-WPELRTI 531
++ EDA G +L LNL++N + L T+
Sbjct: 319 LRPLHRLRHLDLRNNNIN-VLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETL 377
Query: 532 DIAENPIE 539
++ N ++
Sbjct: 378 NLQNNKLQ 385
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 64/286 (22%), Positives = 119/286 (41%)
Query: 192 LDLRGAGLTNISDNAFRGL-SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L + + L I +NA L +GL L ++ N+++++P++ L L L L + N +++
Sbjct: 109 LTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLILNLNHNKITVI 168
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPN 310
F+GL L+ L + + +T++ AF I + AL L
Sbjct: 169 HNNAFEGLETLEILTLY-ENKITQIDPEAFRGLEDHIKRLNLGGNDLTNIPQKALSILST 227
Query: 311 LYHLNLKENAFTSFSESML-AWPELRTIDIAEN-----PIECGCNILWLREMLVRRNTSA 364
L L ++EN + SE L ++ +A N P ++ L + + N +
Sbjct: 228 LKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKIS 287
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 424
V + A +K L + + L + I A R L LR L L +N + +
Sbjct: 288 VI-DKDA---FKGLEE-NLQYLRLGDNQIHTIPSEALRPLHRLRHLDLRNNNINVLAEDA 342
Query: 425 LSKL-TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 469
+ L L + +N +L + F+ L+ L+ L + + L R+
Sbjct: 343 FTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQN-NKLQRI 387
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 69/313 (22%), Positives = 129/313 (41%)
Query: 159 FIYLGM-LAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTNISDNAFRGLSGLRSL 216
F++L + + L + + + + A + LG L+ LD+ + + A + L L L
Sbjct: 99 FVFLALDIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQALQHLFHLLIL 158
Query: 217 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS-YLKRLEITGASNLTRV 275
L N++ I L LE L + +N + ++ F+GL ++KRL + G ++LT +
Sbjct: 159 NLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRGLEDHIKRLNL-GGNDLTNI 217
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPEL- 334
+ A + I EG GL +L L L N T+ ++ + L
Sbjct: 218 PQKALS-ILSTLKKLEIQENKIRTISEGDFEGLQSLDSLILAHNMITTVPANVFSHLTLL 276
Query: 335 RTIDIAENPIECGCNILW--LREML--VRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAG 390
++++ N I + L E L +R + + L+ L L DL
Sbjct: 277 NSLELEGNKISVIDKDAFKGLEENLQYLRLGDNQIHTIPSEALR--PLHRLRHLDL--RN 332
Query: 391 AGLTNISDNAFRGLS-GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
+ ++++AF G L L L N ++ +P+ L LE L + N +
Sbjct: 333 NNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSLETLNLQNNKLQRIPQDIM 392
Query: 450 KG-LSYLKRLEIT 461
+ + L+ ++IT
Sbjct: 393 EPVIDTLRIIDIT 405
>WB|WBGene00011971 [details] [associations]
symbol:lron-9 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040017 "positive regulation of
locomotion" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
InterPro:IPR003591 SMART:SM00369 GO:GO:0040011 GO:GO:0040017
GeneTree:ENSGT00700000104286 EMBL:Z81130 UniGene:Cel.6867
GeneID:172529 KEGG:cel:CELE_T23G11.6 UCSC:T23G11.6c CTD:172529
NextBio:875913 PIR:T25194 RefSeq:NP_001076615.1
ProteinModelPortal:O02329 SMR:O02329 EnsemblMetazoa:T23G11.6a
WormBase:T23G11.6a HOGENOM:HOG000015968 InParanoid:O02329
OMA:CNLQTIP ArrayExpress:O02329 Uniprot:O02329
Length = 653
Score = 198 (74.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 85/377 (22%), Positives = 156/377 (41%)
Query: 28 SCNLQEANLDVIPS-HSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPI 85
+CNLQ + PS S +++ +V S N++ ++ L ++D+S I
Sbjct: 144 ACNLQT----IPPSVDSLENLETVVFSNNKLDSLGVDQFKNKKQLSYLDVSGNFITSIEE 199
Query: 86 GGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQ---ACFEGLTALR 142
FEP L L + + + +V I + ++ +R I Q F+ + +
Sbjct: 200 KAFEPLTSLETLVIGEHNFINETVVEEIGRLKALKTLDLSRADGIFQPPETLFKEIPQIE 259
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI 202
+L L + ++ F L L EL + +N+ + AF+GL L+ L L G ++ +
Sbjct: 260 VLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIENITAYAFDGLESLTRLSLAGNFISKL 319
Query: 203 SDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT-RLEELEIGQNGFSMLEAGCFKGLSYL 261
+ F GLS L L L N +++IPT LT +L+ + + N S L + GL L
Sbjct: 320 EPDVFFGLSSLEELDLGWNEIKTIPTDVFKPLTDKLKTISLRNNPISELPS---TGLGML 376
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
++L + T + D +E +L LNL++N
Sbjct: 377 EKLSLAECG-FTSISADQLKDYPKLEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKL 435
Query: 322 TSFSESMLAWPELRTIDIAENPIECG---CNILWLREMLVRR-----------NTSAVFC 367
S + P + ++D++ NP C N ++ E V++ NT+ C
Sbjct: 436 KSLPNLIKNLPAIESLDVSSNPYRCDGELVNFVFGVEDRVKKAEENGNSFFVANTNETVC 495
Query: 368 NSPAPLKYKSLISLSAE 384
+ P L+ + ++ + E
Sbjct: 496 DRPYTLRGEQILQVEVE 512
Score = 178 (67.7 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 99/430 (23%), Positives = 174/430 (40%)
Query: 180 DGAFNGLGRLS----ALDLR---GAGLTNISDNAFRGLSG-LRSLVLTDNRLQSIPTKQL 231
DG G+L+ +L+++ G + D++F+GL LR+L + LQ+IP +
Sbjct: 96 DGGLPEFGKLAPDLKSLEIKECSGQDELKVGDDSFKGLEQTLRNLTIHACNLQTIPPS-V 154
Query: 232 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 291
L LE + N L FK L L+++G + +T + + AF
Sbjct: 155 DSLENLETVVFSNNKLDSLGVDQFKNKKQLSYLDVSG-NFITSIEEKAFEPLTSLETLVI 213
Query: 292 XXXXXX--XXIEE-GALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIA--ENP-IE 345
+EE G L L L L+ + F P++ + ++ P +E
Sbjct: 214 GEHNFINETVVEEIGRLKALKTL-DLSRADGIFQPPETLFKEIPQIEVLKLSGCSIPTLE 272
Query: 346 CG--CNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRG 403
G + L+E+ +R N + N A + L SL+ L AG ++ + + F G
Sbjct: 273 PGQFATLKKLKELDLRVN---LIENITA-YAFDGLESLTR--LSLAGNFISKLEPDVFFG 326
Query: 404 LSGLRSLVLTDNRLQSIPTKQLSKLT-RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
LS L L L N +++IPT LT +L+ + + N S L + GL L++L +
Sbjct: 327 LSSLEELDLGWNEIKTIPTDVFKPLTDKLKTISLRNNPISELPS---TGLGMLEKLSLAE 383
Query: 463 ASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESM 522
T + D I+E +L LNL++N S +
Sbjct: 384 CG-FTSISADQLKDYPKLEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKLKSLPNLI 442
Query: 523 LAWPELRTIDIAENPIECG---CNILWLREMLVRR-----------NTSAVFCNSPAPLK 568
P + ++D++ NP C N ++ E V++ NT+ C+ P L+
Sbjct: 443 KNLPAIESLDVSSNPYRCDGELVNFVFGVEDRVKKAEENGNSFFVANTNETVCDRPYTLR 502
Query: 569 YKSLISLSAE 578
+ ++ + E
Sbjct: 503 GEQILQVEVE 512
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 165 (63.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 51/189 (26%), Positives = 82/189 (43%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 447
C G GLT I N ++ +R L N ++ IP S +L +++ N S L
Sbjct: 93 CRGKGLTEIPTNLPETITEIR---LEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPD 149
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYH 507
F+GL L L + G + +T + K F + + DA L NL
Sbjct: 150 AFQGLRSLNSLVLYG-NKITELPKSLF-EGLFSLQLLLLNANKINCLRVDAFQDLHNLNL 207
Query: 508 LNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILWLREMLVRR--NTSAVFCNS 563
L+L +N + ++ + P ++T+ +A+NP C C++ WL + L TS C S
Sbjct: 208 LSLYDNKLQTIAKGTFS-PLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTS 266
Query: 564 PAPLKYKSL 572
P L K +
Sbjct: 267 PRRLANKRI 275
Score = 160 (61.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 115/548 (20%), Positives = 206/548 (37%)
Query: 46 SIQRLVLSTNRIKT--VDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
S+Q L+L+ N+I VD+ ++ +L + L I G F P + + L N
Sbjct: 180 SLQLLLLNANKINCLRVDAFQDLH-NLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN- 237
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEG--LTALRILYLDDNQLRSVPTPSFIY 161
P +C + N I C L RI + + R +
Sbjct: 238 --P--FICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFI 293
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRL--SALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
G + R L+ AD A R + +D LT I D+ + + LR L
Sbjct: 294 PGT-EDYRSKLSG-DCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAELR---LN 348
Query: 220 DNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG 278
+N + T KL +L ++ N + +E G F+G + + + +T ++ L V+
Sbjct: 349 NNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLT-SNRLENVQHK 407
Query: 279 AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTI 337
F + + +GL ++ L+L +N + + L T+
Sbjct: 408 MFKGLESLKTLMLRSNRISC-VGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTL 466
Query: 338 DIAENPIECGCNILWLREMLVRRN--TSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTN 395
++ NP C C + WL E L ++ T C P LK + ++ +D C +
Sbjct: 467 NLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDS 526
Query: 396 ISDNAFR---GLSGLRSLVLTDNR-LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
R + L ++V N+ L+ +P K + + + EL + N F+++ K
Sbjct: 527 SCSPLSRCPTECTCLDTVVRCSNKGLKVLP-KGIPR--DVTELYLDGNHFTLVP----KE 579
Query: 452 LSYLKRLEITGASN--LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLN 509
L K L + SN ++ + +F++ I GL +L L+
Sbjct: 580 LYNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CIPPRTFDGLKSLRLLS 638
Query: 510 LKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILWLREMLVR--RNTSAVFCNSPAP 566
L N + E + L + I NP+ C CN+ WL + + + C P
Sbjct: 639 LHGNDISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGE 698
Query: 567 LKYKSLIS 574
+ K L++
Sbjct: 699 MADKLLLT 706
Score = 143 (55.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 96/396 (24%), Positives = 167/396 (42%)
Query: 64 IPIYL--SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRV 119
IP L ++ + L + +IP G F P +KL + L++N+ + S +
Sbjct: 101 IPTNLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 160
Query: 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
++G N+I+ + ++ FEGL +L++L L+ N++ + +F L L L + N T+A
Sbjct: 161 VLYG-NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIA 219
Query: 180 DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEE 239
G F+ L + + L A I D + L+ L N +++ + S RL
Sbjct: 220 KGTFSPLRAIQTMHL--AQNPFICDCHLKWLADY----LHTNPIETSGARCTSP-RRLAN 272
Query: 240 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKG-AFADXXXXXXXXXXXXXXXX 298
IGQ +++ F+ S ++ I G + G FAD
Sbjct: 273 KRIGQ-----IKSKKFR-CSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDC 326
Query: 299 XIEEGALVGLPN---LY--HLNLKENAFTSFSESML--AWPELRTIDIAENPI---ECGC 348
++ L +P+ Y L L N FT + + P+LR I+ + N I E G
Sbjct: 327 SNQK--LTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGA 384
Query: 349 --NILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
+ E+L+ N N + +K L SL L ++ + +++F GLS
Sbjct: 385 FEGAAGVNEILLTSNRLE---NVQHKM-FKGLESLKT--LMLRSNRISCVGNDSFIGLSS 438
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
+R L L DN++ +I L L L + N F+
Sbjct: 439 VRLLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFN 474
Score = 129 (50.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 44/196 (22%), Positives = 82/196 (41%)
Query: 388 CAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQNGFSMLEA 446
C+ LT I D+ + + LR L +N + T KL +L ++ N + +E
Sbjct: 326 CSNQKLTKIPDHIPQYTAELR---LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEE 382
Query: 447 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLY 506
G F+G + + + +T ++ L V+ F + D+ +GL ++
Sbjct: 383 GAFEGAAGVNEILLT-SNRLENVQHKMFKGLESLKTLMLRSNRIS-CVGNDSFIGLSSVR 440
Query: 507 HLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLVRRN--TSAVFCNS 563
L+L +N + + L T+++ NP C C + WL E L ++ T C
Sbjct: 441 LLSLYDNQIATIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQK 500
Query: 564 PAPLKYKSLISLSAED 579
P LK + ++ +D
Sbjct: 501 PYFLKEIPIQDVAIQD 516
Score = 126 (49.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 41/163 (25%), Positives = 71/163 (43%)
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
H P CS V+ G+ ++ I E +T +R L+ N ++ +P +F
Sbjct: 79 HCPAACTCS---NNIVDCRGKG-LTEIPTNLPETITEIR---LEQNSIKVIPPGAFSPYK 131
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L + + N + LA AF GL L++L L G +T + + F GL L+ L+L N++
Sbjct: 132 KLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI 191
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
+ L L L + N + G F L ++ + +
Sbjct: 192 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHL 234
Score = 38 (18.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 531 IDIAENPIECGCN 543
+D E ++CGC+
Sbjct: 1321 VDEVEKVVKCGCS 1333
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 197 (74.4 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 91/374 (24%), Positives = 157/374 (41%)
Query: 214 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
R++ T RL ++P + TRL LE+ +N L G L L+ L+++ + +
Sbjct: 36 RAVACTRRRLTAVPDG-IPAETRL--LELSRNRIRCLNPGDLAALPALEELDLS-ENAIA 91
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWP 332
V GAFA+ I G L NL L+L EN + +
Sbjct: 92 HVEPGAFANLPRLRVLRLRGNQLKL-IPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLH 150
Query: 333 ELRTIDIAENPI-----ECGCNILWLREMLVRR-NTSAVFCNSPAPLKYKSLISLSAEDL 386
LR +++ +N + +L L E+ + R N +A+ S L+ SL +L L
Sbjct: 151 SLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLR--SLGALRLRHL 208
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTDN--RLQSIPTKQLSKLTRLEELEIGQNGFSML 444
A ++ D FR L GL L + DN L+ + L L L L + + +
Sbjct: 209 AIA-----SLEDQNFRRLPGLLHLEI-DNWPLLEEVAAGSLRGLN-LTSLSVTHTNITAV 261
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
A + ++L L ++ + ++ V +G+F D ++E A +GL
Sbjct: 262 PAAALRHQAHLTCLNLSH-NPISTVPRGSFRDLVRLRELHLAGALLA-VVEPQAFLGLRQ 319
Query: 505 LYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFC 561
+ LNL N ++ ES + L T+ + NP+ C C +LW+ R + + C
Sbjct: 320 IRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRLLWIVQRRKTLNFDGRLPAC 379
Query: 562 NSPAPLKYKSLISL 575
+PA ++ +L +L
Sbjct: 380 ATPAEVRGDALRNL 393
Score = 187 (70.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 83/312 (26%), Positives = 125/312 (40%)
Query: 136 EGLTA-LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDL 194
+G+ A R+L L N++R + L L EL + N + GAF L RL L L
Sbjct: 50 DGIPAETRLLELSRNRIRCLNPGDLAALPALEELDLSENAIAHVEPGAFANLPRLRVLRL 109
Query: 195 RGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGC 254
RG L I F L L L L++N+L + L L LE+G N +
Sbjct: 110 RGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRA 169
Query: 255 FKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHL 314
F GL L+ L + NLT + G +E+ LP L HL
Sbjct: 170 FAGLLALEELTLERC-NLTAL-SGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHL 227
Query: 315 NLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCN-SPAPL 373
+ +N + E +A LR +++ + NI + +R N S P+
Sbjct: 228 EI-DN-WPLLEE--VAAGSLRGLNLTSLSVT-HTNITAVPAAALRHQAHLTCLNLSHNPI 282
Query: 374 K------YKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
++ L+ L +L AGA L + AF GL +R L L++N L ++
Sbjct: 283 STVPRGSFRDLVRL--RELHLAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHS 340
Query: 428 LTRLEELEIGQN 439
+ LE L + N
Sbjct: 341 VNTLETLRVDGN 352
Score = 165 (63.1 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 69/240 (28%), Positives = 105/240 (43%)
Query: 45 PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P+++ L LS N I V+ A L+ + L +IP G F + L L L+ NK
Sbjct: 78 PALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENK 137
Query: 104 H--FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ S RR+E+ G N + + + F GL AL L L+ L ++ S +
Sbjct: 138 LVILLDYTFQDLHSLRRLEV-GDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGH 196
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN-ISDNAFRGLSGLRSLVLTD 220
L L LR+ +L D F L L L++ L ++ + RGL+ L SL +T
Sbjct: 197 LRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLN-LTSLSVTH 255
Query: 221 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+ ++P L L L + N S + G F+ L L+ L + GA L V AF
Sbjct: 256 TNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGAL-LAVVEPQAF 314
Score = 157 (60.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 60/237 (25%), Positives = 93/237 (39%)
Query: 87 GFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
G + +L+EL N + + ++ + +++ +N I+ ++ F L LR+L L
Sbjct: 51 GIPAETRLLELSRNRIRCLNPGDLAALPALEELDL-SENAIAHVEPGAFANLPRLRVLRL 109
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
NQL+ +P F L L L + N L D F L L L++ L +S A
Sbjct: 110 RGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRA 169
Query: 207 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 266
F GL L L L L ++ + L L L L + + LE F+ L L LEI
Sbjct: 170 FAGLLALEELTLERCNLTALSGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLEI 229
Query: 267 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTS 323
L V G+ + AL +L LNL N ++
Sbjct: 230 DNWPLLEEVAAGSLRGLNLTSLSVTHTNITA--VPAAALRHQAHLTCLNLSHNPIST 284
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 77/302 (25%), Positives = 125/302 (41%)
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N L G L L LDL + ++ AF L LR L L N+L+ IP
Sbjct: 59 LELSRNRIRCLNPGDLAALPALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIP 118
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 287
++L L L++ +N +L F+ L L+RLE+ G ++L V + AFA
Sbjct: 119 PGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEV-GDNDLVFVSRRAFAGLLALE 177
Query: 288 XXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SMLAWPELRTIDIAENPI-- 344
E +L L +L L L+ A S + + P L ++I P+
Sbjct: 178 ELTLERCNLTALSGE-SLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNWPLLE 236
Query: 345 ECGCNILW---LREMLVRR-NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA 400
E L L + V N +AV A L++++ ++ L + ++ + +
Sbjct: 237 EVAAGSLRGLNLTSLSVTHTNITAV---PAAALRHQAHLTC----LNLSHNPISTVPRGS 289
Query: 401 FRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEI 460
FR L LR L L L + + L ++ L + N S LE F ++ L+ L +
Sbjct: 290 FRDLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRV 349
Query: 461 TG 462
G
Sbjct: 350 DG 351
>UNIPROTKB|F1NEZ4 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:LQADYNY
EMBL:AADN02073144 IPI:IPI00582200 Ensembl:ENSGALT00000014971
Uniprot:F1NEZ4
Length = 831
Score = 149 (57.5 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 90 PQEKLVELQLNHN---KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYL 146
P K+ +L LN N + FP + V + + + + G N + I F GL L+ L+L
Sbjct: 35 PPSKIYQLFLNGNALTRLFPNEFV-NYSNAVTLHL-GNNDMQEIHTGAFSGLRTLKRLHL 92
Query: 147 DDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNA 206
++N+L + +F+ L L L+ N + + GAFN L +L L L L ++ N
Sbjct: 93 NNNKLEVLKEDTFLGLESLEYLQADYNYISAIEAGAFNKLNKLKVLILNDNLLLSLPSNV 152
Query: 207 FRGLSGLRSLVLTDNRLQSIP-TKQLSKLTRLEELEIGQN 245
FR + L L L NRL+ +P L + + E+++ +N
Sbjct: 153 FRFVL-LTHLDLRGNRLKMMPFAGVLEHIGGIMEIQLEEN 191
Score = 139 (54.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 41/124 (33%), Positives = 61/124 (49%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G NRI+ I + F LT+LR LYL+ N L + F L L L + NV +
Sbjct: 385 GNNRIAVIQEGAFTNLTSLRRLYLNGNYLEILYPSMFDGLQSLQYLYLEYNVIKEILPHT 444
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELE 241
F+ L L L L L ++ DN F G S L L L +N +P + L +L+ L +++
Sbjct: 445 FDTLSNLHLLFLNNNLLRSLPDNVFGGTS-LTRLNLRNNHFSHLPVRGVLDRLSALIQID 503
Query: 242 IGQN 245
+ +N
Sbjct: 504 LQEN 507
Score = 130 (50.8 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 53/210 (25%), Positives = 88/210 (41%)
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
++ L L G LT + N F S +L L +N +Q I T S L L+ L + N
Sbjct: 38 KIYQLFLNGNALTRLFPNEFVNYSNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNNNKL 97
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVG 307
+L+ F GL L+ L+ + ++ + GAF + + L+
Sbjct: 98 EVLKEDTFLGLESLEYLQ-ADYNYISAIEAGAF---------NKLNKLKVLILNDNLLLS 147
Query: 308 LPN-------LYHLNLKENAFTS--FSESMLAWPELRTIDIAENPIECGCNILWLREML- 357
LP+ L HL+L+ N F+ + + I + ENP C C++L L+ L
Sbjct: 148 LPSNVFRFVLLTHLDLRGNRLKMMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLD 207
Query: 358 -VRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
+ + C +P L K + L+ +DL
Sbjct: 208 TITVFVGEIVCETPFRLHGKDVTQLTRQDL 237
Score = 130 (50.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 52/202 (25%), Positives = 86/202 (42%)
Query: 390 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 449
G LT + N F S +L L +N +Q I T S L L+ L + N +L+ F
Sbjct: 46 GNALTRLFPNEFVNYSNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNNNKLEVLKEDTF 105
Query: 450 KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN----- 504
GL L+ L+ + ++ + GAF I+ ++ L+ LP+
Sbjct: 106 LGLESLEYLQ-ADYNYISAIEAGAF---------NKLNKLKVLILNDNLLLSLPSNVFRF 155
Query: 505 --LYHLNLKENAFTS--FSESMLAWPELRTIDIAENPIECGCNILWLREML--VRRNTSA 558
L HL+L+ N F+ + + I + ENP C C++L L+ L +
Sbjct: 156 VLLTHLDLRGNRLKMMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLDTITVFVGE 215
Query: 559 VFCNSPAPLKYKSLISLSAEDL 580
+ C +P L K + L+ +DL
Sbjct: 216 IVCETPFRLHGKDVTQLTRQDL 237
Score = 109 (43.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 34/125 (27%), Positives = 55/125 (44%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
L+L+ N L + F+ L +G N + GAF+GL L L L L +
Sbjct: 42 LFLNGNALTRLFPNEFVNYSNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNNNKLEVLK 101
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
++ F GL L L N + +I +KL +L+ L + N L + F+ + L
Sbjct: 102 EDTFLGLESLEYLQADYNYISAIEAGAFNKLNKLKVLILNDNLLLSLPSNVFRFV-LLTH 160
Query: 264 LEITG 268
L++ G
Sbjct: 161 LDLRG 165
Score = 100 (40.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 35/152 (23%), Positives = 64/152 (42%)
Query: 385 DLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
++ C ++NIS+ + + + L LT N LQ I L++ + L+ L +G N +++
Sbjct: 334 NVNCQEKKISNISELHPKPTTP-KKLYLTSNYLQVIYRTDLAEYSSLDLLHLGNNRIAVI 392
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
+ G F L+ L+RL + G N + + D I L N
Sbjct: 393 QEGAFTNLTSLRRLYLNG--NYLEILYPSMFDGLQSLQYLYLEYNVIKEILPHTFDTLSN 450
Query: 505 LYHLNLKENAFTSFSESMLAWPELRTIDIAEN 536
L+ L L N S +++ L +++ N
Sbjct: 451 LHLLFLNNNLLRSLPDNVFGGTSLTRLNLRNN 482
Score = 95 (38.5 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 49/188 (26%), Positives = 74/188 (39%)
Query: 405 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 464
S L L L +NR+ I + LT L L + N +L F GL L+ L + +
Sbjct: 377 SSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEILYPSMFDGLQSLQYLYLE-YN 435
Query: 465 NLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS-ESML 523
+ + F + D + G +L LNL+ N F+ +L
Sbjct: 436 VIKEILPHTFDTLSNLHLLFLNNNLLRSL--PDNVFGGTSLTRLNLRNNHFSHLPVRGVL 493
Query: 524 -AWPELRTIDIAENPIECGCNILWLR---EMLVRRNT---------SAVFCNSPAPLKYK 570
L ID+ ENP +C C+I+ LR E + +N+ + V C SP +
Sbjct: 494 DRLSALIQIDLQENPWDCTCDIMGLRNWIEQVTDQNSQQSNPPVVINEVICESPTKHSGE 553
Query: 571 SLISLSAE 578
L LS E
Sbjct: 554 HLKFLSKE 561
Score = 82 (33.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 31/135 (22%), Positives = 50/135 (37%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S + L L N L + + + L +G N + G F GL LKRL + +
Sbjct: 37 SKIYQLFLNGNALTRLFPNEFVNYSNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNN-N 95
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
L +++ F IE GA L L L L +N S ++
Sbjct: 96 KLEVLKEDTFLGLESLEYLQADYNYISA-IEAGAFNKLNKLKVLILNDNLLLSLPSNVFR 154
Query: 331 WPELRTIDIAENPIE 345
+ L +D+ N ++
Sbjct: 155 FVLLTHLDLRGNRLK 169
Score = 61 (26.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGG-FEPQEKLVELQLNHNKHFPQQ 108
L+L+ N + ++ S + ++ L H+DL ++P G E ++E+QL N P
Sbjct: 138 LILNDNLLLSLPSNVFRFVLLTHLDLRGNRLKMMPFAGVLEHIGGIMEIQLEEN---PWN 194
Query: 109 IVCSII 114
C ++
Sbjct: 195 CTCDLL 200
Score = 58 (25.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 393 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ-LSKLTRLEELEIGQN 439
L ++ DN F G S L L L +N +P + L +L+ L ++++ +N
Sbjct: 461 LRSLPDNVFGGTS-LTRLNLRNNHFSHLPVRGVLDRLSALIQIDLQEN 507
>WB|WBGene00011345 [details] [associations]
symbol:dma-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016358
"dendrite development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 EMBL:Z75713 PIR:T24315
RefSeq:NP_492253.1 ProteinModelPortal:Q22075 SMR:Q22075
STRING:Q22075 PaxDb:Q22075 EnsemblMetazoa:T01G9.3 GeneID:187968
KEGG:cel:CELE_T01G9.3 UCSC:T01G9.3 CTD:187968 WormBase:T01G9.3
HOGENOM:HOG000017308 InParanoid:Q22075 OMA:LTMANTH NextBio:937126
Uniprot:Q22075
Length = 603
Score = 196 (74.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 84/327 (25%), Positives = 133/327 (40%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I + F G+ LR+L L N L +PT F YL L L + N + L+
Sbjct: 121 NNIEHATMSNFGGMPKLRVLDLSSNHLNILPTGVFTYLRALRSLSLSNNTISDLSTNLLR 180
Query: 185 GLG--RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 242
GL R+ LD + +I++ F +S L L L L SI + L ++ +L +L I
Sbjct: 181 GLNSLRVLRLDRNPIPIEHINE-LFTDVSQLDELYLNHCNLSSIYSLALDRIPQLRQLGI 239
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXX--- 299
G N M+ + L L L+++ S + + AF +
Sbjct: 240 GGNNLKMVPTKELRSLPQLSVLDLSHNS-IQEITACAFCNTNISKLDLSHNLLGISKDSP 298
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESMLAWP--ELRTIDIAENPIECGCNILW---LR 354
E A +P L HL+L N F L W EL +I ++ N ++ W L+
Sbjct: 299 FNEDAFRTMP-LRHLDLSFNHMNDFDSKWLGWAQEELTSIALSGNFLK-NFEESWTYTLK 356
Query: 355 EM--LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVL 412
+ L F P +Y LISL+ +G LT + DN L +++ +
Sbjct: 357 SLIHLELAYNHIKFIPVQLPSRYYHLISLNI-----SGNELTYLPDNINTLLPNVKTFDI 411
Query: 413 TDNRLQSIPTKQLSKLTRLEELEIGQN 439
T NR + L+ L +E++ + N
Sbjct: 412 TANRFHTFSHTDLAFLNNVEQVYVDGN 438
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 46/189 (24%), Positives = 85/189 (44%)
Query: 90 PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDN 149
P ++++L N+ +H + R +++ N ++ + F L ALR L L +N
Sbjct: 111 PSLEVLDLHSNNIEHATMSNFGGMPKLRVLDL-SSNHLNILPTGVFTYLRALRSLSLSNN 169
Query: 150 QLRSVPTPSFIYLGMLAELRVGLN-VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
+ + T L L LR+ N + + F + +L L L L++I A
Sbjct: 170 TISDLSTNLLRGLNSLRVLRLDRNPIPIEHINELFTDVSQLDELYLNHCNLSSIYSLALD 229
Query: 209 GLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 268
+ LR L + N L+ +PTK+L L +L L++ N + A F + + +L+++
Sbjct: 230 RIPQLRQLGIGGNNLKMVPTKELRSLPQLSVLDLSHNSIQEITACAFCNTN-ISKLDLS- 287
Query: 269 ASNLTRVRK 277
NL + K
Sbjct: 288 -HNLLGISK 295
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 196 (74.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 85/334 (25%), Positives = 138/334 (41%)
Query: 116 PRRVEIFGQNRISRIDQACF----EGL-TALRILYLDDNQLRSVPTPSFIYLGMLAELRV 170
P R E Q R + F EG+ T R L L N+++++ F L EL +
Sbjct: 36 PPRCECSAQERAVLCHRKRFMVVPEGIPTETRQLDLGKNRIKTLNQDEFANYPHLEELEL 95
Query: 171 GLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 230
N+ + + GAFN L L L LR L I F GLS L L +++N++ +
Sbjct: 96 NENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYM 155
Query: 231 LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 290
L L+ LE+G N + F GL+ L++L + NLT + A +
Sbjct: 156 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC-NLTSIPTEALSHLHGLIVLR 214
Query: 291 XXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNI 350
I + LY L + E + + ++M + L +++ I CN+
Sbjct: 215 LRHLNINA-IRD---YSFKRLYRLKVLEISHWPYLDTMTS-NCLYGLNLTSLSIT-HCNL 268
Query: 351 LWLREMLVRRNTSAVFCN---SPAPLKYKSLIS--LSAEDLGCAGAGLTNISDNAFRGLS 405
+ + VR F N +P S++ L +++ G LT + AFRGL+
Sbjct: 269 TSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLN 328
Query: 406 GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 439
LR L ++ N L ++ + LE L + N
Sbjct: 329 YLRILNVSGNLLTTLEESAFHSVGNLETLILDNN 362
Score = 182 (69.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/188 (31%), Positives = 86/188 (45%)
Query: 80 WLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLT 139
++++P G + + ++L N K Q + +E+ +N IS I+ F L
Sbjct: 55 FMVVP-EGIPTETRQLDLGKNRIKTLNQDEFANYPHLEELEL-NENIISAIEPGAFNNLF 112
Query: 140 ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
LR L L N+L+ +P F L L +L + N L D F L L +L++ L
Sbjct: 113 NLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 172
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
IS AF GL+ L L L L SIPT+ LS L L L + + + FK L
Sbjct: 173 VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLY 232
Query: 260 YLKRLEIT 267
LK LEI+
Sbjct: 233 RLKVLEIS 240
Score = 179 (68.1 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 83/340 (24%), Positives = 141/340 (41%)
Query: 38 VIPSHSNPSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVE 96
V+P ++L L NRIKT++ Y L+ ++L+ I G F L
Sbjct: 57 VVPEGIPTETRQLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRT 116
Query: 97 LQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSV 154
L L N K P + + + +++I +N+I + F+ L L+ L + DN L +
Sbjct: 117 LGLRSNRLKLIPLGVFTGLSNLTKLDI-SENKIVILLDYMFQDLYNLKSLEVGDNDLVYI 175
Query: 155 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLR 214
+F L L +L + T++ A + L L L LR + I D +F+ L L+
Sbjct: 176 SHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 235
Query: 215 SLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 273
L ++ L ++ + L L L L I + + + L YL+ L ++ +T
Sbjct: 236 VLEISHWPYLDTMTSNCLYGLN-LTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVT 294
Query: 274 RVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWP 332
+G+ +E A GL L LN+ N T+ ES +
Sbjct: 295 I--EGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVG 352
Query: 333 ELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCNSP 370
L T+ + NP+ C C +LW+ R + N C++P
Sbjct: 353 NLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTP 392
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 75/287 (26%), Positives = 131/287 (45%)
Query: 3 VDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVI-PSHSNP--SIQRLVLSTNRIKT 59
+D G+ R K +N E + + + L E + I P N +++ L L +NR+K
Sbjct: 69 LDLGKN-RIKTLNQDEFANYPHLE-ELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKL 126
Query: 60 VDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISP 116
+ + LS L +D+S +I+ F+ L L++ N + + + S
Sbjct: 127 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 186
Query: 117 RRVEIFGQNRISRIDQAC--FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVG-LN 173
++ + N S +A GL LR+ +L+ N +R SF L L L +
Sbjct: 187 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY---SFKRLYRLKVLEISHWP 243
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 233
T+ GL L++L + LT+I + R L LR L L+ N + +I L
Sbjct: 244 YLDTMTSNCLYGLN-LTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHD 302
Query: 234 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
L RL+E+++ + +E F+GL+YL+ L ++G + LT + + AF
Sbjct: 303 LLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSG-NLLTTLEESAF 348
Score = 147 (56.8 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 70/287 (24%), Positives = 119/287 (41%)
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL + ++ + F L L L +N + +I + L L L + N ++
Sbjct: 69 LDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIP 128
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNL 311
G F GLS L +L+I+ + + + F D I A GL +L
Sbjct: 129 LGVFTGLSNLTKLDIS-ENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHRAFSGLNSL 186
Query: 312 YHLNLKENAFTSFSESMLAWPE----LRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
L L++ TS L+ LR + N I + L + V + +
Sbjct: 187 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR-DYSFKRLYRLKVLEISHWPYL 245
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
++ + L L+ L LT+I + R L LR L L+ N + +I L
Sbjct: 246 DT---MTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHD 302
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L RL+E+++ + +E F+GL+YL+ L ++G + LT + + AF
Sbjct: 303 LLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSG-NLLTTLEESAF 348
Score = 131 (51.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 75/342 (21%), Positives = 129/342 (37%)
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 294
T +L++G+N L F +L+ LE+ + ++ + GAF +
Sbjct: 64 TETRQLDLGKNRIKTLNQDEFANYPHLEELELN-ENIISAIEPGAF-NNLFNLRTLGLRS 121
Query: 295 XXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE-------C 346
I G GL NL L++ EN + M L+++++ +N +
Sbjct: 122 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS 181
Query: 347 GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG 406
G N L E L + + A LI L L + I D +F+ L
Sbjct: 182 GLNSL---EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLN-----INAIRDYSFKRLYR 233
Query: 407 LRSLVLTD-NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 465
L+ L ++ L ++ + L L L L I + + + L YL+ L ++
Sbjct: 234 LKVLEISHWPYLDTMTSNCLYGLN-LTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPI 292
Query: 466 LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML-A 524
+T +G+ +E A GL L LN+ N T+ ES +
Sbjct: 293 VTI--EGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHS 350
Query: 525 WPELRTIDIAENPIECGCNILWL--REMLVRRNTSAVFCNSP 564
L T+ + NP+ C C +LW+ R + N C++P
Sbjct: 351 VGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTP 392
>MGI|MGI:2685352 [details] [associations]
symbol:Podnl1 "podocan-like 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2685352
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00600000084286
HSSP:P07359 HOVERGEN:HBG059195 OrthoDB:EOG42V8FX
HOGENOM:HOG000231119 CTD:79883 EMBL:DQ303463 EMBL:BC063764
IPI:IPI00420321 RefSeq:NP_001013402.2 UniGene:Mm.334654
ProteinModelPortal:Q6P3Y9 SMR:Q6P3Y9 PhosphoSite:Q6P3Y9
PRIDE:Q6P3Y9 Ensembl:ENSMUST00000093380 GeneID:244550
KEGG:mmu:244550 UCSC:uc012gha.1 InParanoid:Q6P3Y9 NextBio:386307
Bgee:Q6P3Y9 CleanEx:MM_PODNL1 Genevestigator:Q6P3Y9 Uniprot:Q6P3Y9
Length = 568
Score = 195 (73.7 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 131/555 (23%), Positives = 225/555 (40%)
Query: 2 LVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD 61
L D+ Q L C P+ S RD + + +L + P + + + L L N+++ +
Sbjct: 28 LGDSSQPLPRPC--PWRCS--CPRDDTVDCAGLDLRIFPDNITRAARHLSLQNNQLRELP 83
Query: 62 -SAIPIYLSLQHVDLSHTTWLI---IPIGGFEPQEKLVELQLNHNKHF--PQQIVCSIIS 115
+ + L+ +DL H+ + +P FE +L + HNK PQ + S+
Sbjct: 84 YNELSRLSGLRTLDL-HSNLITSEGLPDEAFESLNQLENFYVAHNKLSVAPQFLPRSL-- 140
Query: 116 PRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG--MLAELRVGLN 173
RV N + I F ALR +YL +N+LR+ P + G ++ L + N
Sbjct: 141 --RVADLAANEVVEIFPLTFGEKPALRSVYLHNNRLRNTGLPPNTFHGSEVITTLSLSSN 198
Query: 174 VFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL--QSIPTKQL 231
+ L L RL L+ ++ + A + LR L L N+L +
Sbjct: 199 QLSYLPPSLPASLERLH---LQNNLISKVPRGALSLQTHLRELYLQHNQLTDSGLDATTF 255
Query: 232 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 291
SKL+ LE L++ N + + G G + L ++ VR
Sbjct: 256 SKLSSLEYLDLSHNQLATVPEG-LPGTLTILHLGRNCIRHVEAVR--LHKARGLRYLLLQ 312
Query: 292 XXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC-GCNI 350
+ +G L L L+ L+L N ++ L+ + + N + G
Sbjct: 313 HNKLGASALPKGTLRPLRALHTLHLYGNKLERVPPALPR--HLQALVMPHNHVAALGARD 370
Query: 351 LWLREMLVRRNTS--AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGL-SGL 407
L L N + ++ P ++ L +L + DL AG LT + + GL + L
Sbjct: 371 LVSARALAELNLAYNSLASAHVHPSAFRRLRALRSLDL--AGNQLTRLPE----GLPASL 424
Query: 408 RSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM--LEAGCFKGLSYLKRLEITGASN 465
RSL L N+L+++ +QL+ L +L EL + N + + G + L LK L+++ +
Sbjct: 425 RSLRLQRNQLRTLEPEQLAGLNKLRELNLAHNRLRVGDIGPGTWHELQALKVLDLSH-NE 483
Query: 466 LTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAF--TSF-SESM 522
L+ V D + +A + P+L L L+ N TS +E++
Sbjct: 484 LSFVPP----DLPEALEELYLQANRISHVGPEAFLSTPHLRALFLRANRLHMTSIRAEAL 539
Query: 523 LAWPELRTIDIAENP 537
LR +D AENP
Sbjct: 540 QGLTHLRVVDTAENP 554
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 207 (77.9 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 97/449 (21%), Positives = 175/449 (38%)
Query: 142 RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN 201
RIL L DN++ S+ L L + N+ + F L L L++R L
Sbjct: 55 RILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLAR 114
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYL 261
I + L L L L N + ++ +++LS L + +++ +N S L +
Sbjct: 115 IPRGSHE-LGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKVNI 173
Query: 262 KRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAF 321
++L++ ++++T + F+ + + + L L L+L N
Sbjct: 174 EKLDLA-SNSITDIGTDHFSSFNTLVTLKLARNHITT-LNQFSFSRLRKLESLDLTRNMI 231
Query: 322 TSFSESMLAW---PELRTIDIAENPI-ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKS 377
LA+ P L+ + +A N + + + E L N S +
Sbjct: 232 REVR--FLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFG 289
Query: 378 LISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 437
L SL DL +IS ++ L+ L L NR+QS+P+ L +LEEL +
Sbjct: 290 LTSLEVLDLSYNQIQSFHIS--SWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEELILS 347
Query: 438 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA--FADXXXXXXXXXXXXXXXXIIE 495
N L G+S L +L+++ + V GA + +I
Sbjct: 348 ANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRSLRFTNNQLRVIP 407
Query: 496 EDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRR- 554
+ A P L L+L +N + EL+ + + + I C C I WL + R
Sbjct: 408 KRAFERFPALEELDLTDNPIATIHPEAFEPLELKRLVMNSSSILCDCQISWLASWIYRLK 467
Query: 555 -NTSAVF--CNSPAPLKYKSLISLSAEDL 580
+ S++ C+ P PL ++++ +L
Sbjct: 468 LDKSSIIAKCSYPPPLADLYVVAIDTANL 496
Score = 196 (74.1 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 86/352 (24%), Positives = 149/352 (42%)
Query: 30 NLQEANLDVIP--SHSNPSIQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIG 86
N+++ L IP SH +++L L +N I TV S YL+ ++ VDLS +P
Sbjct: 106 NIRKNRLARIPRGSHELGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKP 165
Query: 87 GFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
+ + +L L N S + +++ +N I+ ++Q F L L L
Sbjct: 166 TTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKL-ARNHITTLNQFSFSRLRKLESL 224
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L N +R V +F L L + + N L DG F L L+L + +++
Sbjct: 225 DLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTE 284
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
GL+ L L L+ N++QS S +L+ L + N L +G F+ L L+ L
Sbjct: 285 GWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEEL 344
Query: 265 EITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV---GLPNLYHLNLKENAF 321
I A+++ + K A +E+GA++ +P L L N
Sbjct: 345 -ILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRSLRFTNNQL 403
Query: 322 TSFSESMLA-WPELRTIDIAENPIEC----GCNILWLREMLVRRNTSAVFCN 368
+ +P L +D+ +NPI L L+ +++ N+S++ C+
Sbjct: 404 RVIPKRAFERFPALEELDLTDNPIATIHPEAFEPLELKRLVM--NSSSILCD 453
Score = 189 (71.6 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 80/352 (22%), Positives = 141/352 (40%)
Query: 46 SIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH 104
+++ + LS N I + ++++ +DL+ + I F LV L+L N H
Sbjct: 148 AVRSVDLSRNLISYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARN-H 206
Query: 105 FPQQIVCSIISPRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
S R++E +N I + F L +L+ + L N + + F
Sbjct: 207 ITTLNQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYAC 266
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N + +G GL L LDL + + +++ L+ L L NR
Sbjct: 267 EGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNR 326
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGA--F 280
+QS+P+ L +LEEL + N L G+S L +L+++ + V GA +
Sbjct: 327 IQSLPSGSFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLY 386
Query: 281 ADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIA 340
I + A P L L+L +N + EL+ + +
Sbjct: 387 NTSMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAFEPLELKRLVMN 446
Query: 341 ENPIECGCNILWLREMLVRR--NTSAVF--CNSPAPLKYKSLISLSAEDLGC 388
+ I C C I WL + R + S++ C+ P PL ++++ +L C
Sbjct: 447 SSSILCDCQISWLASWIYRLKLDKSSIIAKCSYPPPLADLYVVAIDTANLTC 498
Score = 166 (63.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 82/381 (21%), Positives = 162/381 (42%)
Query: 108 QIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAE 167
+I +I + R+ + N I ID++ +G L+ L + +N +R + F L L
Sbjct: 45 EIPTTIPNNTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKI 104
Query: 168 LRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L + N + G+ LG L LDLR ++ ++ L+ +RS+ L+ N + +P
Sbjct: 105 LNIRKNRLARIPRGSHE-LGHLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLP 163
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXX 287
S +E+L++ N + + F + L L++ +++T + + +F+
Sbjct: 164 KPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLA-RNHITTLNQFSFS-RLRKL 221
Query: 288 XXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIEC 346
+ A LP+L +++L N + M A L+ ++++ N ++
Sbjct: 222 ESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQA 281
Query: 347 -------GCNILWLREMLVRRNTSAVFCN-SPAP-LKYKSLISLSAEDLGCAGAGLTNIS 397
G L + ++ + S + S P LK+ SL S + L
Sbjct: 282 VTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSL----------P 331
Query: 398 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM-LEAGCF---KGLS 453
+FR L L L+L+ N + S+ L ++ L +L++ N ++ +E G +
Sbjct: 332 SGSFRVLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMP 391
Query: 454 YLKRLEITGASNLTRVRKGAF 474
+L+ L T + L + K AF
Sbjct: 392 FLRSLRFTN-NQLRVIPKRAF 411
Score = 163 (62.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 103/446 (23%), Positives = 182/446 (40%)
Query: 35 NLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFE--PQ 91
+L IP+ + + L+LS N I+++D S + + LQ +D+S+ I F P
Sbjct: 42 DLSEIPTTIPNNTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPN 101
Query: 92 EKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQL 151
K++ ++ N P+ + ++++ N IS + L A+R + L N +
Sbjct: 102 LKILNIRKNRLARIPRGSH-ELGHLEKLDL-RSNLISTVTSEELSYLAAVRSVDLSRNLI 159
Query: 152 RSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLS 211
+P P+ + +L + N T + F+ L L L +T ++ +F L
Sbjct: 160 SYLPKPTTSAKVNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLR 219
Query: 212 GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASN 271
L SL LT N ++ + ++L L+ + + +N L+ G F LK L ++ +
Sbjct: 220 KLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLS-TNR 278
Query: 272 LTRVRKG-AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESML 329
+ V +G F I + P L L+L N S S S
Sbjct: 279 VQAVTEGWMFGLTSLEVLDLSYNQIQSFHISSWSHT--PKLKWLSLHSNRIQSLPSGSFR 336
Query: 330 AWPELRTIDIAENPIE-----CGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAE 384
+L + ++ N I+ + L ++ + NT AV A L S+ L +
Sbjct: 337 VLRQLEELILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVEDGAVLYNTSMPFLRS- 395
Query: 385 DLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L L I AF L L LTDN + +I + L L+ L + N S+L
Sbjct: 396 -LRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAFEPL-ELKRLVM--NSSSIL 451
Query: 445 EAGC-FKGL-SYLKRLEITGASNLTR 468
C L S++ RL++ +S + +
Sbjct: 452 -CDCQISWLASWIYRLKLDKSSIIAK 476
Score = 37 (18.1 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 538 IECGCNILWLREMLVRRNTSAV 559
I+C C+++ R+ +V + V
Sbjct: 731 IDCSCDLISSRQRMVWKRQQQV 752
Score = 37 (18.1 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 344 IECGCNILWLREMLVRRNTSAV 365
I+C C+++ R+ +V + V
Sbjct: 731 IDCSCDLISSRQRMVWKRQQQV 752
>ZFIN|ZDB-GENE-040310-3 [details] [associations]
symbol:rtn4rl1b "reticulon 4 receptor-like 1b"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] ZFIN:ZDB-GENE-040310-3 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000116109 HOVERGEN:HBG063707 KO:K16660
EMBL:BC163592 EMBL:AY263333 IPI:IPI00505158 RefSeq:NP_982347.1
UniGene:Dr.134948 SMR:Q6WZD2 IntAct:Q6WZD2 GeneID:403308
KEGG:dre:403308 CTD:403308 InParanoid:Q6WZD2 NextBio:20816917
Uniprot:Q6WZD2
Length = 478
Score = 192 (72.6 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 68/235 (28%), Positives = 103/235 (43%)
Query: 114 ISPRRVEIFGQN-RISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 172
I P IF QN +I R+ Q F T L++ N + + +F +L EL +G
Sbjct: 50 IPPHSERIFLQNNKIHRLLQGHFSPTTVT--LWIYSNNITYIEPSTFQGFTLLEELDLGD 107
Query: 173 NVFT-TLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 231
N + +L+ F+GLGRL AL L GL+ + +N F+GL L+ L L DN L+ +
Sbjct: 108 NRYLRSLSAETFHGLGRLHALHLYRCGLSALPNNIFQGLRNLQYLYLQDNHLEYLQDDLF 167
Query: 232 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 291
L L L + N L F+GL L RL + + L V + AF D
Sbjct: 168 VDLHNLSHLFLHGNRLWSLHQNTFRGLGALDRL-LLHHNQLQWVDRLAFHDLRRLTTLYL 226
Query: 292 XXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIEC 346
E L LP L +L L +N + +++ W L+ + + + C
Sbjct: 227 FNNSLTELAGE-CLTQLPALEYLRLNDNPWECDCKALSLWDWLKKFRGSTSSVGC 280
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 66/239 (27%), Positives = 95/239 (39%)
Query: 173 NVFTTLADGAFNGLGRLSALDLR-GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 231
N T + F G L LDL L ++S F GL L +L L L ++P
Sbjct: 84 NNITYIEPSTFQGFTLLEELDLGDNRYLRSLSAETFHGLGRLHALHLYRCGLSALPNNIF 143
Query: 232 SKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXX 291
L L+ L + N L+ F L L L + G + L + + F
Sbjct: 144 QGLRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLFLHG-NRLWSLHQNTFRGLGALDRLLL 202
Query: 292 XXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNI 350
++ A L L L L N+ T + E + P L + + +NP EC C
Sbjct: 203 HHNQLQW-VDRLAFHDLRRLTTLYLFNNSLTELAGECLTQLPALEYLRLNDNPWECDCKA 261
Query: 351 L----WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL-GCAGA-GLTNISDNAFRG 403
L WL++ R +TS+V C +PA L K L L ED C+G+ L N + G
Sbjct: 262 LSLWDWLKKF--RGSTSSVGCVAPAELAGKDLKQLRKEDFPNCSGSESLHQSKTNTWAG 318
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 73/263 (27%), Positives = 110/263 (41%)
Query: 1 MLVDAGQELRSKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTV 60
+LV G EL C + + SC Q N +P P +R+ L N+I +
Sbjct: 11 LLVLCGLELSWSCPR-HCICYMAPSTVSC--QAHNFLSVPEGIPPHSERIFLQNNKIHRL 67
Query: 61 DSA--IPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRR 118
P ++L + ++ T+ I P F+ L EL L N++ + R
Sbjct: 68 LQGHFSPTTVTLW-IYSNNITY-IEP-STFQGFTLLEELDLGDNRYLRSLSAETFHGLGR 124
Query: 119 VEIFGQNR--ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 176
+ R +S + F+GL L+ LYL DN L + F+ L L+ L + N
Sbjct: 125 LHALHLYRCGLSALPNNIFQGLRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLFLHGNRLW 184
Query: 177 TLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 236
+L F GLG L L L L + AF L L +L L +N L + + L++L
Sbjct: 185 SLHQNTFRGLGALDRLLLHHNQLQWVDRLAFHDLRRLTTLYLFNNSLTELAGECLTQLPA 244
Query: 237 LEELEIGQNGFSMLEAGCFKGLS 259
LE L + N + E C K LS
Sbjct: 245 LEYLRLNDNPW---ECDC-KALS 263
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 58/213 (27%), Positives = 85/213 (39%)
Query: 372 PLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 431
P ++ L DLG L ++S F GL L +L L L ++P L L
Sbjct: 91 PSTFQGFTLLEELDLG-DNRYLRSLSAETFHGLGRLHALHLYRCGLSALPNNIFQGLRNL 149
Query: 432 EELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXX 491
+ L + N L+ F L L L + G + L + + F
Sbjct: 150 QYLYLQDNHLEYLQDDLFVDLHNLSHLFLHG-NRLWSLHQNTFRGLGALDRLLLHHNQLQ 208
Query: 492 XIIEEDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNIL----W 546
+ + A L L L L N+ T + E + P L + + +NP EC C L W
Sbjct: 209 WV-DRLAFHDLRRLTTLYLFNNSLTELAGECLTQLPALEYLRLNDNPWECDCKALSLWDW 267
Query: 547 LREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 579
L++ R +TS+V C +PA L K L L ED
Sbjct: 268 LKKF--RGSTSSVGCVAPAELAGKDLKQLRKED 298
>ZFIN|ZDB-GENE-080219-38 [details] [associations]
symbol:zgc:172282 "zgc:172282" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-080219-38 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG052352 EMBL:BC171440 IPI:IPI00882605 UniGene:Dr.85826
ProteinModelPortal:B7ZV32 Uniprot:B7ZV32
Length = 687
Score = 159 (61.0 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 51/168 (30%), Positives = 79/168 (47%)
Query: 110 VCSIISPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAEL 168
V ++I R VE+ +N I+ + + F +T+L L L N + + +F L L L
Sbjct: 45 VPTVIDRRTVELRLTENFITAVKRRDFANMTSLLHLTLSRNTISQIMPYTFADLKRLRAL 104
Query: 169 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG-LRSLVLTDNRLQSIP 227
+ N + + D F GL L L L L NIS +AF G L L L+ N L IP
Sbjct: 105 HLDSNRLSVITDDHFRGLTNLRHLILANNQLHNISPHAFDDFLGTLEDLDLSYNNLVDIP 164
Query: 228 TKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
+ +LT + L + N + G F L L RL++T ++ L ++
Sbjct: 165 WDTIGRLTNVNTLNMDHNLIDHVPLGIFSNLHKLARLDMT-SNKLKKI 211
Score = 126 (49.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 39/141 (27%), Positives = 65/141 (46%)
Query: 106 PQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 165
P++ +C +SP + + + + LR L +N + +V F + L
Sbjct: 21 PKRCMCQNLSPSLAILCAKTGLLFVPTVIDRRTVELR---LTENFITAVKRRDFANMTSL 77
Query: 166 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 225
L + N + + F L RL AL L L+ I+D+ FRGL+ LR L+L +N+L +
Sbjct: 78 LHLTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVITDDHFRGLTNLRHLILANNQLHN 137
Query: 226 IPTKQLSK-LTRLEELEIGQN 245
I L LE+L++ N
Sbjct: 138 ISPHAFDDFLGTLEDLDLSYN 158
Score = 117 (46.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 49/176 (27%), Positives = 80/176 (45%)
Query: 64 IPIYLSLQHVDLSHTTWLIIPIG--GFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEI 121
+P + + V+L T I + F L+ L L+ N Q + + +R+
Sbjct: 45 VPTVIDRRTVELRLTENFITAVKRRDFANMTSLLHLTLSRNT-ISQIMPYTFADLKRLRA 103
Query: 122 F--GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI-YLGMLAELRVGLNVFTTL 178
NR+S I F GLT LR L L +NQL ++ +F +LG L +L + N L
Sbjct: 104 LHLDSNRLSVITDDHFRGLTNLRHLILANNQLHNISPHAFDDFLGTLEDLDLSYN---NL 160
Query: 179 ADGAFNGLGRLS---ALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQL 231
D ++ +GRL+ L++ + ++ F L L L +T N+L+ IP L
Sbjct: 161 VDIPWDTIGRLTNVNTLNMDHNLIDHVPLGIFSNLHKLARLDMTSNKLKKIPPDPL 216
Score = 96 (38.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 38/177 (21%), Positives = 67/177 (37%)
Query: 364 AVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTK 423
A+ C L ++I +L +T + F ++ L L L+ N + I
Sbjct: 34 AILCAKTGLLFVPTVIDRRTVELRLTENFITAVKRRDFANMTSLLHLTLSRNTISQIMPY 93
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXX 483
+ L RL L + N S++ F+GL+ L+ L I + L + AF D
Sbjct: 94 TFADLKRLRALHLDSNRLSVITDDHFRGLTNLRHL-ILANNQLHNISPHAFDDFLGTLED 152
Query: 484 XXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIE 539
I D + L N+ LN+ N + + +L +D+ N ++
Sbjct: 153 LDLSYNNLVDIPWDTIGRLTNVNTLNMDHNLIDHVPLGIFSNLHKLARLDMTSNKLK 209
Score = 83 (34.3 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 19/60 (31%), Positives = 26/60 (43%)
Query: 342 NPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAF 401
NP+ C C +LWLR + R C SP L K ++ E+ C +T S F
Sbjct: 241 NPLHCNCELLWLRRLT--REDDLETCASPPDLTAKYFWTIPEEEFICDPPVITRKSPKTF 298
Score = 73 (30.8 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 536 NPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAED 579
NP+ C C +LWLR + R C SP L K ++ E+
Sbjct: 241 NPLHCNCELLWLRRLT--REDDLETCASPPDLTAKYFWTIPEEE 282
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 373 LKYKSLISLSAEDLG-CAGAGLTNISDNA--------FRGLSGLRSLVLTDNRLQSIPTK 423
L Y +L+ + + +G N+ N F L L L +T N+L+ IP
Sbjct: 155 LSYNNLVDIPWDTIGRLTNVNTLNMDHNLIDHVPLGIFSNLHKLARLDMTSNKLKKIPPD 214
Query: 424 QL 425
L
Sbjct: 215 PL 216
>UNIPROTKB|A0ENH4 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9823 "Sus
scrofa" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0032722 GO:GO:0032755 GO:GO:0009615
GO:GO:0051092 GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372
SMART:SM00013 GO:GO:0032760 GO:GO:0043330 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 PANTHER:PTHR24365:SF5 GO:GO:0045356
GO:GO:0034346 EMBL:CU466336 EMBL:DQ266435 EMBL:AB291812
RefSeq:NP_001090913.1 UniGene:Ssc.51668 STRING:A0ENH4
Ensembl:ENSSSCT00000017207 GeneID:100037937 KEGG:ssc:100037937
OMA:LNLGYNI Uniprot:A0ENH4
Length = 905
Score = 195 (73.7 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 101/416 (24%), Positives = 163/416 (39%)
Query: 74 DLSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRID 131
D SH IP + + L L HN + P +I S G N IS+++
Sbjct: 37 DCSHLKLTQIPD---DLPANITVLNLTHNQLRRLPPANF-TIYSQLTTLDGGFNTISKLE 92
Query: 132 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 191
+ L L IL L N+L + +FI+ L EL + N + + F L L
Sbjct: 93 PELCQSLPLLEILNLQHNELSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIK 152
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL--TRLEELEIGQNGFSM 249
LDL GL++ L L+ L+L +N++ ++ ++L L + L+ LE+ N
Sbjct: 153 LDLSHNGLSSTKLGTQLQLENLQELLLANNKISALKREELDFLGNSSLKRLELSSNQIQE 212
Query: 250 LEAGCFKGLSYLKRLEITGAS-NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
GCF + L L + + + K GL
Sbjct: 213 FSPGCFHAIGKLFGLSLNNVKLSPSLTEKLCLELSNTSIENLSLSNIQLYKTSNTTFFGL 272
Query: 309 P--NLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSAV 365
NL L+L N+ + AW P L+ + N IE R ++ ++
Sbjct: 273 KQTNLSMLDLSHNSLSVIGNDSFAWLPHLKYFFLEYNNIE-------------RLSSRSL 319
Query: 366 FCNSPAPLKYKSLI-SLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 424
+ S +KY +L S + + + A L I D +F+ L L L + DN I
Sbjct: 320 YGLSN--VKYLNLRRSFTKQSISLAS--LPKIEDFSFQWLKSLEYLNMEDNNFPGIKRNT 375
Query: 425 LSKLTRLEELEIGQNGFSMLEA---GCFKGL--SYLKRLEITGASNLTRVRKGAFA 475
+ L +L+ L + N FS L F L S L L +T + ++++ GAF+
Sbjct: 376 FTGLIKLKSLSLS-NSFSSLRTLTNETFISLADSPLLILNLT-KNKISKIESGAFS 429
Score = 152 (58.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 105/466 (22%), Positives = 179/466 (38%)
Query: 128 SRIDQACFE-GLTALRILYLDDNQLRSVPTPSFIYLGM--LAELRVGLNVFTTLADGAFN 184
S ++ C E T++ L L + QL +F L L+ L + N + + + +F
Sbjct: 237 SLTEKLCLELSNTSIENLSLSNIQLYKTSNTTFFGLKQTNLSMLDLSHNSLSVIGNDSFA 296
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L L L + +S + GLS ++ L N +S TKQ L L ++E
Sbjct: 297 WLPHLKYFFLEYNNIERLSSRSLYGLSNVKYL----NLRRSF-TKQSISLASLPKIE--D 349
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX-XIEEG 303
F L K L YL + +N +++ F +
Sbjct: 350 FSFQWL-----KSLEYLNMED----NNFPGIKRNTFTGLIKLKSLSLSNSFSSLRTLTNE 400
Query: 304 ALVGLPN--LYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRR 360
+ L + L LNL +N + +W L+ +D+ N E G + +E +
Sbjct: 401 TFISLADSPLLILNLTKNKISKIESGAFSWLGHLKVLDLGLN--EIGQELTG-QEWRGLK 457
Query: 361 NTSAVFC--NSPAPLKYKSLISL-SAEDLGCAGAGLTNI--SDNAFRGLSGLRSLVLTDN 415
N V+ N L S + S + L L N+ S + F L L L L++N
Sbjct: 458 NIVEVYLSYNRYLELTTDSFALVPSLQQLMLRRVALRNMDCSPSPFHPLFNLTILDLSNN 517
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSML----EAG----CFKGLSYLKRLEITGASNLT 467
+ +I + L L +L+ L++ N + L G KGLS+L L + ++
Sbjct: 518 NIANINDELLKGLEKLQILDLQHNNLARLWKHANPGGPVQFLKGLSHLHILNLE-SNGFD 576
Query: 468 RVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML--AW 525
+ AF D I+ +L L+L++N TS +++ A+
Sbjct: 577 EIPADAFRDLSELKSIDLGLNNLN-ILPPSVFDNQVSLKSLSLQKNLITSVKKTVFGPAF 635
Query: 526 PELRTIDIAENPIECGC-NILWLREMLVRRNT------SAVFCNSP 564
+L +D+ NP +C C +I W + +T S CN+P
Sbjct: 636 QKLSNLDMRFNPFDCTCESIAWFVSWINSTHTNISELSSHYLCNTP 681
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 108/471 (22%), Positives = 185/471 (39%)
Query: 31 LQEANLDVIPSHSNPSIQRLVLSTNRIKTVDS----AI-PIY-LSLQHVDLSH--TTWLI 82
L+ LD + N S++RL LS+N+I+ AI ++ LSL +V LS T L
Sbjct: 187 LKREELDFL---GNSSLKRLELSSNQIQEFSPGCFHAIGKLFGLSLNNVKLSPSLTEKLC 243
Query: 83 IPIGGFEPQE-KLVELQL--NHNKHF--PQQIVCSIISPRRVEIFGQNRISRIDQACFEG 137
+ + + L +QL N F +Q S++ N +S I F
Sbjct: 244 LELSNTSIENLSLSNIQLYKTSNTTFFGLKQTNLSMLD------LSHNSLSVIGNDSFAW 297
Query: 138 LTALRILYLDDNQLRSVPTPSFI------YLGM---LAELRVGLNVFTTLADGAFNGLGR 188
L L+ +L+ N + + + S YL + + + L + D +F L
Sbjct: 298 LPHLKYFFLEYNNIERLSSRSLYGLSNVKYLNLRRSFTKQSISLASLPKIEDFSFQWLKS 357
Query: 189 LSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN--RLQSIPTKQLSKL--TRLEELEIGQ 244
L L++ I N F GL L+SL L+++ L+++ + L + L L + +
Sbjct: 358 LEYLNMEDNNFPGIKRNTFTGLIKLKSLSLSNSFSSLRTLTNETFISLADSPLLILNLTK 417
Query: 245 NGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGA 304
N S +E+G F L +LK L++ G + + + G + +
Sbjct: 418 NKISKIESGAFSWLGHLKVLDL-GLNEIGQELTGQEWRGLKNIVEVYLSYNRYLELTTDS 476
Query: 305 LVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSA 364
+P+L L L+ A LR +D + +P N+ L L N +
Sbjct: 477 FALVPSLQQLMLRRVA-------------LRNMDCSPSPFHPLFNLTILD--LSNNNIAN 521
Query: 365 VFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAF-RGLSGLRSLVLTDNRLQSIPTK 423
+ L+ ++ L +L F +GLS L L L N IP
Sbjct: 522 INDELLKGLEKLQILDLQHNNLARLWKHANPGGPVQFLKGLSHLHILNLESNGFDEIPAD 581
Query: 424 QLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
L+ L+ +++G N ++L F LK L + + +T V+K F
Sbjct: 582 AFRDLSELKSIDLGLNNLNILPPSVFDNQVSLKSLSLQ-KNLITSVKKTVF 631
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 193 (73.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 72/310 (23%), Positives = 134/310 (43%)
Query: 42 HSNPSIQRLVLSTNRIKTVDSAIPIY--LS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQ 98
H +I+ + ++ N +KTV P++ LS L ++L+ IP F L +L+
Sbjct: 101 HVEATIEHITINGNELKTV----PVFGNLSTLMSMNLNSNQISSIPDKAFNGLSALTQLR 156
Query: 99 LNHNK--HFPQQIVCSI-ISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 155
L +N FP + + ++ S +++ G N + I L L L N + +
Sbjct: 157 LENNAICDFPPKSLDAVKASLVLLDVSG-NCLDAIPAQILRNAANLMYLDLGSNNISEIN 215
Query: 156 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRS 215
+ L L ELRV N + AF + +L L L+ ++ + N +G L
Sbjct: 216 NFELMNLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEV 275
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRV 275
L +++N L ++P+ L L L+++ + N + +E F L+ + + +N+ ++
Sbjct: 276 LDVSNNALYALPS--LKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQN-NNIVQI 332
Query: 276 RKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PEL 334
+ +F + IE G G+ NL L+++ N T+ S A L
Sbjct: 333 SRNSF-ESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHL 391
Query: 335 RTIDIAENPI 344
T+D+ N I
Sbjct: 392 TTLDLGHNKI 401
Score = 189 (71.6 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 77/320 (24%), Positives = 134/320 (41%)
Query: 146 LDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDN 205
++ N+L++VP F L L + + N +++ D AFNGL L+ L L + +
Sbjct: 111 INGNELKTVPV--FGNLSTLMSMNLNSNQISSIPDKAFNGLSALTQLRLENNAICDFPPK 168
Query: 206 AFRGLSGLRSLVLTD---NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLK 262
+ + SLVL D N L +IP + L L L++G N S + L +L+
Sbjct: 169 SLDAVKA--SLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLR 226
Query: 263 RLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFT 322
L + + L R+ AF + ++ L G NL L++ NA
Sbjct: 227 ELRVQN-NTLRRIHPMAFMNVPQLQYLYLQDNIIST-LDGNRLQGFKNLEVLDVSNNALY 284
Query: 323 SFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLS 382
+ S+ P L+ + + N I + + ++ +V N+ + S SL
Sbjct: 285 ALP-SLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQ--LISVQNNNIVQISRNSFESLD 341
Query: 383 AEDLGCAGAG-LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 441
+ G L I F G+ L+ L + +N L ++ ++L L L++G N
Sbjct: 342 KLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKI 401
Query: 442 SMLEAGCFKGLSYLKRLEIT 461
+E G F LS L L+++
Sbjct: 402 HDIEEGTFDKLSKLFWLDLS 421
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 64/256 (25%), Positives = 117/256 (45%)
Query: 29 CNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAI-PIYLSLQHVDLSHTTWLIIPIGG 87
C+ +LD + + S+ L +S N + + + I +L ++DL I I
Sbjct: 163 CDFPPKSLDAVKA----SLVLLDVSGNCLDAIPAQILRNAANLMYLDLGSNN--ISEINN 216
Query: 88 FEPQEK--LVELQLNHNKHFPQQIVCSIISPRRVEIFGQ-NRISRIDQACFEGLTALRIL 144
FE L EL++ +N + + P+ ++ Q N IS +D +G L +L
Sbjct: 217 FELMNLPFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGFKNLEVL 276
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
+ +N L ++P S L L ++RV N+ T + AF+ L + ++ + IS
Sbjct: 277 DVSNNALYALP--SLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISR 334
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
N+F L L L++ +N L I + L++L I N + L+A F L++L L
Sbjct: 335 NSFESLDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTL 394
Query: 265 EITGASNLTRVRKGAF 280
++ G + + + +G F
Sbjct: 395 DL-GHNKIHDIEEGTF 409
Score = 151 (58.2 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 74/320 (23%), Positives = 121/320 (37%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGL-GRLSALD 193
F L+ L + L+ NQ+ S+P +F L L +LR+ N + + + L LD
Sbjct: 122 FGNLSTLMSMNLNSNQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLLD 181
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
+ G L I R + L L L N + I +L L L EL + N +
Sbjct: 182 VSGNCLDAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHPM 241
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYH 313
F + L+ L + N+ G + +L LPNL
Sbjct: 242 AFMNVPQLQYLYLQ--DNIISTLDGNRLQGFKNLEVLDVSNNALYALP--SLKDLPNLKQ 297
Query: 314 LNLKENAFTSFSESMLAW-PELRTIDIAENPI-ECGCNILWLREMLVRRNTSAVFCNSPA 371
+ + N T + P L+ I + N I + N + LV V NS A
Sbjct: 298 VRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLV---VLLVGNNSLA 354
Query: 372 PLKYKSLISL-SAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 430
++ + + + L LT + ++F L+ L +L L N++ I KL++
Sbjct: 355 KIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSK 414
Query: 431 LEELEIGQNGFSMLEAGCFK 450
L L++ N S + FK
Sbjct: 415 LFWLDLSNNKISGFKTSVFK 434
Score = 150 (57.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 52/215 (24%), Positives = 99/215 (46%)
Query: 45 PSIQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQ--EKLVELQLNH 101
P ++ L + N ++ + A LQ++ L +I + G Q + L L +++
Sbjct: 223 PFLRELRVQNNTLRRIHPMAFMNVPQLQYLYLQDN--IISTLDGNRLQGFKNLEVLDVSN 280
Query: 102 NKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
N + + + + ++V + G N I++I+ F L+++ + +N + + SF
Sbjct: 281 NALYALPSLKDLPNLKQVRVDG-NLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFES 339
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L L VG N + G F+G+ L L +R LT + ++F L+ L +L L N
Sbjct: 340 LDKLVVLLVGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHN 399
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 256
++ I KL++L L++ N S + FK
Sbjct: 400 KIHDIEEGTFDKLSKLFWLDLSNNKISGFKTSVFK 434
Score = 135 (52.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 49/191 (25%), Positives = 87/191 (45%)
Query: 45 PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK 103
P +Q L L N I T+D + + + +L+ +D+S+ +P + L +++++ N
Sbjct: 247 PQLQYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALYALP--SLKDLPNLKQVRVDGNL 304
Query: 104 HFPQQIVCSIISPRRVEIFGQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ + +P I QN I +I + FE L L +L + +N L + F +
Sbjct: 305 ITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFDGM 364
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L +L + N T L +F L L+ LDL + +I + F LS L L L++N+
Sbjct: 365 KNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNK 424
Query: 223 LQSIPTKQLSK 233
+ T K
Sbjct: 425 ISGFKTSVFKK 435
Score = 131 (51.2 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 68/336 (20%), Positives = 134/336 (39%)
Query: 211 SGLRSLVLTDNRLQSI-PTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
+GLR++ + ++ LQS PT +E + I NG + F LS L + + +
Sbjct: 79 NGLRTIAILNSTLQSFSPTAWRHVEATIEHITI--NGNELKTVPVFGNLSTLMSMNLN-S 135
Query: 270 SNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML 329
+ ++ + AF + +L L++ N + +L
Sbjct: 136 NQISSIPDKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLLDVSGNCLDAIPAQIL 195
Query: 330 A-WPELRTIDIAENPI-ECG----CNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA 383
L +D+ N I E N+ +LRE+ V+ NT P+ + ++ L
Sbjct: 196 RNAANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNT----LRRIHPMAFMNVPQL-- 249
Query: 384 EDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 443
+ L ++ + N +G L L +++N L ++P+ L L L+++ + N +
Sbjct: 250 QYLYLQDNIISTLDGNRLQGFKNLEVLDVSNNALYALPS--LKDLPNLKQVRVDGNLITK 307
Query: 444 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLP 503
+E F L+ + + +N+ ++ + +F + IE G+
Sbjct: 308 IETLAFSNNPNLQLISVQN-NNIVQISRNSF-ESLDKLVVLLVGNNSLAKIERGMFDGMK 365
Query: 504 NLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPI 538
NL L+++ N T+ S A L T+D+ N I
Sbjct: 366 NLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKI 401
>WB|WBGene00003915 [details] [associations]
symbol:pan-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0002119 GO:GO:0018996 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
EMBL:Z34802 GeneTree:ENSGT00700000104056 GeneID:175596
KEGG:cel:CELE_M88.6 UCSC:M88.6b CTD:175596 HOGENOM:HOG000021363
NextBio:888834 PIR:T23841 RefSeq:NP_497925.1
ProteinModelPortal:Q9U3A0 SMR:Q9U3A0 PRIDE:Q9U3A0
EnsemblMetazoa:M88.6b WormBase:M88.6b ArrayExpress:Q9U3A0
Uniprot:Q9U3A0
Length = 594
Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 46/138 (33%), Positives = 72/138 (52%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+NRI ++++ F GL +L+ L L N+++ + +F L + EL + N L G F
Sbjct: 136 ENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIRVLKTGTF 195
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+G+ L L L+ L I AFRGL+ L L+L++N L++I S L L L++G
Sbjct: 196 DGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNLRVLDLG 255
Query: 244 QNGFSMLEAGCFKGLSYL 261
N S +E F L L
Sbjct: 256 SNKISNVEMKSFPKLEKL 273
Score = 186 (70.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 86/334 (25%), Positives = 146/334 (43%)
Query: 139 TALRILYLDDNQLRSVPTPSF--IYLGMLAELRVGLNVFTTLADGAFNGLG-RLSALDLR 195
T L L + D+ + +P F ++ + R GL+ TL +F LG L LR
Sbjct: 79 TELGRLTIRDSTVNVLPQDLFENVFAKQVKLERCGLS---TLQPNSFQSLGGSAELLSLR 135
Query: 196 GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCF 255
+ + F GL L++L L N++Q I +L ++EEL + +N +L+ G F
Sbjct: 136 ENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDIRVLKTGTF 195
Query: 256 KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLN 315
G+ LK+L + NL ++KGAF I+ L NL L+
Sbjct: 196 DGMKNLKKLTLQNC-NLEIIQKGAFRGLNSLEQLILSNNNLEN-IDWTIFSALKNLRVLD 253
Query: 316 LKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFC-NSPAPLK 374
L N ++ M ++P+L + + N I+ +I L+++ A+F N +
Sbjct: 254 LGSNKISNVE--MKSFPKLEKLVLNNNTIDSMKSIK-LKDL--PSLVVALFDRNKIESIG 308
Query: 375 YKSLISLSAED----LGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI----P----T 422
+ L+ D L A L+ IS AF+ L +L+L N+++ + P T
Sbjct: 309 DMDMFGLTRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELSSHSPSQVRT 368
Query: 423 KQLSKLTRLEELEIGQNGFSMLEAGCF-KGLSYL 455
L+ L +L L++ N S++ + K LS L
Sbjct: 369 PFLASLKKLVTLQLSSNNLSVIRSDELPKSLSSL 402
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 87/371 (23%), Positives = 143/371 (38%)
Query: 194 LRGAGLTNISDNAFRGLSGLRSLV-LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEA 252
L GL+ + N+F+ L G L+ L +NR++ + + L L+ L++ N ++
Sbjct: 109 LERCGLSTLQPNSFQSLGGSAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDV 168
Query: 253 GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLY 312
G F+ L ++ L + +++ ++ G F D I++GA GL +L
Sbjct: 169 GAFEELKKVEEL-LLNENDIRVLKTGTF-DGMKNLKKLTLQNCNLEIIQKGAFRGLNSLE 226
Query: 313 HLNLKENAFTSFSESML-AWPELRTIDIAENPIE-CGCNILWLREMLVRRNTSAVFCNSP 370
L L N + ++ A LR +D+ N I E LV N + +S
Sbjct: 227 QLILSNNNLENIDWTIFSALKNLRVLDLGSNKISNVEMKSFPKLEKLVLNNNTI---DSM 283
Query: 371 APLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSG---LRSLVLTDNRLQSIPTKQLSK 427
+K K L SL + +I D GL+ + +L L N L I K
Sbjct: 284 KSIKLKDLPSLVVALFD--RNKIESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQH 341
Query: 428 LTRLEEL--------EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 479
L L E+ + S + L L L+++ ++NL+ +R
Sbjct: 342 TPNLITLLLQYNQIEELSSHSPSQVRTPFLASLKKLVTLQLS-SNNLSVIRSDELPKSLS 400
Query: 480 XXXXXXXXXXXXXIIEEDALVGLP--NLY-HLN----LKENAFTSFSESMLAWPELRTID 532
IE AL G+ LY H N L + F SFS + +D
Sbjct: 401 SLALDHNVISK---IEARALEGMEIKRLYLHSNKLNYLYQGTFDSFSPK-----SVEAVD 452
Query: 533 IAENPIECGCN 543
++ NP C CN
Sbjct: 453 VSLNPWVCVCN 463
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 55/217 (25%), Positives = 97/217 (44%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN-- 102
S + L L NRIK ++ + L SL+ +DL+ I +G FE +K+ EL LN N
Sbjct: 128 SAELLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDI 187
Query: 103 KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ + + +++ + N + I + F GL +L L L +N L ++ F L
Sbjct: 188 RVLKTGTFDGMKNLKKLTLQNCN-LEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSAL 246
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L +G N + + +F +L L L + ++ + L L + N+
Sbjct: 247 KNLRVLDLGSNKISNVEMKSFP---KLEKLVLNNNTIDSMKSIKLKDLPSLVVALFDRNK 303
Query: 223 LQSIPTKQLSKLTR---LEELEIGQNGFSMLEAGCFK 256
++SI + LTR +E L + +N S + F+
Sbjct: 304 IESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQ 340
>FB|FBgn0013272 [details] [associations]
symbol:Gp150 "Gp150" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007185
"transmembrane receptor protein tyrosine phosphatase signaling
pathway" evidence=IDA] [GO:0048749 "compound eye development"
evidence=IMP] [GO:0002121 "inter-male aggressive behavior"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005886 InterPro:IPR003591 SMART:SM00369 GO:GO:0002121
ChiTaRS:ANPEP GO:GO:0048749 GO:GO:0007185 FlyBase:FBgn0013272
EMBL:BT015195 ProteinModelPortal:Q6AWQ3 STRING:Q6AWQ3 PRIDE:Q6AWQ3
InParanoid:Q6AWQ3 ArrayExpress:Q6AWQ3 Bgee:Q6AWQ3 Uniprot:Q6AWQ3
Length = 1076
Score = 193 (73.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 91/418 (21%), Positives = 163/418 (38%)
Query: 135 FEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN-GLGRLSALD 193
F GL L + L D L + +F+ L L + N + ++ + + LD
Sbjct: 337 FHGLNELYAVNLTDVGLAIINPDTFVGNKKLRMLTISGNDLSVMSSIHYLLKSSSIEELD 396
Query: 194 LRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG 253
L ++ AF LS + + L+ N L+ +P K K+T LEEL++ N + L
Sbjct: 397 FSRNNLMELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRD 456
Query: 254 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYH 313
F G + L I T G + +P L +
Sbjct: 457 IFNGTT----LSILHLKYNTF--NGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTN 510
Query: 314 LNLKENAFTSFS-ESMLAWPELRTIDIAENPIECGCNILWLR--EM-LVRRNTSAVFCNS 369
LNLK N +S L LR ID++ N ++ +L+ + E+ ++R N +
Sbjct: 511 LNLKGNGIKKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQL 570
Query: 370 PAP--LKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK 427
P L Y ++ D+ G + AF + L +L L N + +P + ++
Sbjct: 571 PTDGFLSYSGEFTVYYLDISNCAIG--PLGHKAFSTMPHLTTLKLAWNNINHLPREIFTE 628
Query: 428 LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXX 487
L +L +L++ N + ++ F L +L + G + ++R+ F
Sbjct: 629 LHKLIDLDLSNNLITRMDDLIFMDNGELTKLSLAG-NPISRLSVRLFLPLHQLRCLDVND 687
Query: 488 XXXXXIIEE-DALVG---LPNLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIEC 540
++ + D G +L N N SE + ++ LR++DI NP++C
Sbjct: 688 CELTTLLSDRDLGAGYKIFDSLRSFNASGNLIKKITSEDVKSFKNLRSLDITNNPLKC 745
Score = 135 (52.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 96/416 (23%), Positives = 160/416 (38%)
Query: 30 NLQEANLDVI-PSH--SNPSIQRLVLSTNRIKTVDSAIPIYL---SLQHVDLSHTTWLII 83
NL + L +I P N ++ L +S N + +V S+I L S++ +D S + +
Sbjct: 347 NLTDVGLAIINPDTFVGNKKLRMLTISGNDL-SVMSSIHYLLKSSSIEELDFSRNNLMEL 405
Query: 84 PIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTAL 141
F +V + L+ N K P++ + +++ N ++ + + F G T L
Sbjct: 406 NPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDL-SYNSLTELPRDIFNG-TTL 463
Query: 142 RILYLDDNQLRSVPTPSFIYLGM--LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGL 199
IL+L N ++ G L +L + N + F+ + L+ L+L+G G+
Sbjct: 464 SILHLKYNTFNGD-----LHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGI 518
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNG-FSMLEAGCFKGL 258
I ++F L LR + L+ N L I K + L+ + + N S L F L
Sbjct: 519 KKIQPDSFLTLKNLRHIDLSINDLDQISGMLFFKNSELDVIRLNDNPRLSQLPTDGF--L 576
Query: 259 SYLKRLEI--TGASNLTRVRKG--AFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHL 314
SY + SN G AF+ E L L L
Sbjct: 577 SYSGEFTVYYLDISNCAIGPLGHKAFSTMPHLTTLKLAWNNINHLPRE-IFTELHKLIDL 635
Query: 315 NLKENAFTSFSESM-LAWPELRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNSPAPL 373
+L N T + + + EL + +A NPI L+L + R C L
Sbjct: 636 DLSNNLITRMDDLIFMDNGELTKLSLAGNPISRLSVRLFL-PLHQLRCLDVNDCELTTLL 694
Query: 374 KYKSL-----ISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQ 424
+ L I S +G + I+ + LRSL +T+N L+ P Q
Sbjct: 695 SDRDLGAGYKIFDSLRSFNASGNLIKKITSEDVKSFKNLRSLDITNNPLKCTPDFQ 750
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 88/389 (22%), Positives = 153/389 (39%)
Query: 157 PSFIY-LGM--LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGL 213
P+F LG+ +A +++ L AF+GL L A++L GL I+ + F G L
Sbjct: 308 PNFFQNLGLKNVASIKIANCTLEYLHAEAFHGLNELYAVNLTDVGLAIINPDTFVGNKKL 367
Query: 214 RSLVLTDNRLQSIPT-KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
R L ++ N L + + L K + +EEL+ +N L F LS + + ++ ++L
Sbjct: 368 RMLTISGNDLSVMSSIHYLLKSSSIEELDFSRNNLMELNPKAFSHLSNVVYINLS-QNSL 426
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP 332
++ + AF + + G L L+LK N F +
Sbjct: 427 KKLPEKAF-EKVTLLEELDLSYNSLTELPRDIFNGT-TLSILHLKYNTFNG--DLHFGTK 482
Query: 333 ELRTIDIAENPI-ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGA 391
+L+ +D++ N I + ++ L N P + +L +L DL
Sbjct: 483 DLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGIKKIQPDSFLTLKNLRHIDLSIND- 541
Query: 392 GLTNISDNAFRGLSGLRSLVLTDN-RLQSIPTKQLSKLT---RLEELEIGQNGFSMLEAG 447
L IS F S L + L DN RL +PT + + L+I L
Sbjct: 542 -LDQISGMLFFKNSELDVIRLNDNPRLSQLPTDGFLSYSGEFTVYYLDISNCAIGPLGHK 600
Query: 448 CFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN--L 505
F + +L L++ +N+ + + F + I D L+ + N L
Sbjct: 601 AFSTMPHLTTLKLAW-NNINHLPREIFTELHKLIDLDLSNNL---ITRMDDLIFMDNGEL 656
Query: 506 YHLNLKENAFTSFSESM-LAWPELRTIDI 533
L+L N + S + L +LR +D+
Sbjct: 657 TKLSLAGNPISRLSVRLFLPLHQLRCLDV 685
Score = 125 (49.1 bits), Expect = 0.00043, P = 0.00043
Identities = 46/200 (23%), Positives = 84/200 (42%)
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEI--FGQNRI 127
L V+L+ II F +KL L ++ N + ++ +E F +N +
Sbjct: 343 LYAVNLTDVGLAIINPDTFVGNKKLRMLTISGNDLSVMSSIHYLLKSSSIEELDFSRNNL 402
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
++ F L+ + + L N L+ +P +F + +L EL + N T L FNG
Sbjct: 403 MELNPKAFSHLSNVVYINLSQNSLKKLPEKAFEKVTLLEELDLSYNSLTELPRDIFNGT- 461
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
LS L L+ + + G L+ L L+ N + + K+ L L + NG
Sbjct: 462 TLSILHLK---YNTFNGDLHFGTKDLQQLDLSFNSIVQVHHSMFDKMPGLTNLNLKGNGI 518
Query: 248 SMLEAGCFKGLSYLKRLEIT 267
++ F L L+ ++++
Sbjct: 519 KKIQPDSFLTLKNLRHIDLS 538
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 192 (72.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 104/437 (23%), Positives = 164/437 (37%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N IS+++ + L L IL L N++ + +FI+ L EL + N + +
Sbjct: 84 GFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDP 143
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL--TRLEEL 240
F L L LDL GL++ L L+ L+L++N++ S+ ++ L + L+ L
Sbjct: 144 FKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGNSSLKRL 203
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGAS-NLTRVRKGAFADXXXXXXXXXXXXXXXXX 299
E+ N GCF L L L + A + + K
Sbjct: 204 ELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDT 263
Query: 300 IEEGALVGLP--NLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIE-CGCNILWLRE 355
I GL NL L+L N+ AW P L + + N IE +
Sbjct: 264 ISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLS 323
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
L R + F + ISL++ L I D +F+ L L L + DN
Sbjct: 324 NLRRLDLRRSFT--------RQSISLTS---------LPKIDDFSFQWLKCLEYLNMDDN 366
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEA---GCFKGLSYLKRLEITGASN-LTRVRK 471
I + L RL+ L + N FS L F L+ L + N +++++
Sbjct: 367 NFPGIKRNTFTGLVRLKFLSLS-NSFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQS 425
Query: 472 GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNL---Y-----HLNLKENAFTS---FSE 520
GAF+ + GL N+ Y +L L N+FTS
Sbjct: 426 GAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQR 485
Query: 521 SMLAWPELRTIDIAENP 537
ML L+ +D + +P
Sbjct: 486 LMLRRVALKNVDCSPSP 502
Score = 187 (70.9 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 119/473 (25%), Positives = 188/473 (39%)
Query: 128 SRIDQACFE-GLTALRILYLDDNQLRSVPTPSFIYLGM--LAELRVGLNVFTTLADGAFN 184
S ++ C E T++ L L NQL ++ +F L L L + N + + +F
Sbjct: 237 SLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFA 296
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN-RLQSIPTKQLSK--------LT 235
L L L L + ++S +F GLS LR L L + QSI L K L
Sbjct: 297 WLPHLEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLK 356
Query: 236 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA-SNLTRVRKGAFADXXXXXXXXXXXX 294
LE L + N F ++ F GL LK L ++ + S+L + F
Sbjct: 357 CLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFL------------- 403
Query: 295 XXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWL 353
+L G P L LNL +N + +W L +D+ N E G +
Sbjct: 404 ---------SLAGCPLLL-LNLTKNKISKIQSGAFSWLGHLEVLDLGLN--EIGQELTG- 450
Query: 354 REMLVRRNTSAVFC--NSPAPLKYKSLISL-SAEDLGCAGAGLTNI--SDNAFRGLSGLR 408
+E N ++ N L S S+ S + L L N+ S + FR L L
Sbjct: 451 QEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLV 510
Query: 409 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML----EAG----CFKGLSYLKRLEI 460
L L++N + +I + L L +LE L++ N + L G KGL +L L +
Sbjct: 511 ILDLSNNNIANINDELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNL 570
Query: 461 TGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSE 520
G++ + AF D I+ + +L L+L++N TS +
Sbjct: 571 -GSNGFDEIPVEAFKDLRELKSIDLGMNNLN-ILPQSVFDNQVSLKSLSLQKNLITSVQK 628
Query: 521 SML--AWPELRTIDIAENPIECGC-NILWLREML--VRRNTSAV----FCNSP 564
++ A+ L +D+ NP +C C +I W + N S + CN+P
Sbjct: 629 TVFGPAFRNLSYLDMRFNPFDCTCESIAWFVNWINSTHTNISELSNHYLCNTP 681
Score = 153 (58.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 84/335 (25%), Positives = 128/335 (38%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N++ R+ A F + L IL N + + L L L + N + L+D F
Sbjct: 62 NQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFI 121
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L+ L L + I ++ F+ L L L L+ N L S +L L+EL +
Sbjct: 122 FCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSN 181
Query: 245 NGFSML--EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
N S L E F G S LKRLE++ ++ + G F + E
Sbjct: 182 NKISSLTPEEFDFLGNSSLKRLELS-SNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTE 240
Query: 303 GALVGLPN--LYHLNLKENAFTSFSESM---LAWPELRTIDIAENPIECGCN--ILWLRE 355
+ L N + +L+L N + S + L L T+D++ N + N WL
Sbjct: 241 KLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPH 300
Query: 356 M----LVRRNTSAVFCNSPAPLKYKSLISL--SAEDLGCAGAGLTNISDNAFRGLSGLRS 409
+ L N + S L + L S + L I D +F+ L L
Sbjct: 301 LEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEY 360
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L + DN I + L RL+ L + N FS L
Sbjct: 361 LNMDDNNFPGIKRNTFTGLVRLKFLSLS-NSFSSL 394
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 89/360 (24%), Positives = 141/360 (39%)
Query: 139 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198
T + +L L NQLR +P +F L L G N + L L L L+L+
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
++ +SD F L L L N +Q I L L +L++ NG S + G L
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQL 171
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE--EGALVGLPNLYHLNL 316
L+ L ++ + ++ + F D E G L L L+L
Sbjct: 172 ENLQELLLSN-NKISSLTPEEF-DFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGLSL 229
Query: 317 KENAFT-SFSESM---LAWPELRTIDIAENPIEC-------GCNILWLREMLVRRNTSAV 365
+ S +E + L+ + + ++ N ++ G L + + RN+ V
Sbjct: 230 NNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRV 289
Query: 366 FCN-SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN-RLQSIPTK 423
N S A L + +SL ++ ++S +F GLS LR L L + QSI
Sbjct: 290 MGNDSFAWLPHLEYLSLEYNNI-------EHLSSRSFYGLSNLRRLDLRRSFTRQSISLT 342
Query: 424 QLSK--------LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA-SNLTRVRKGAF 474
L K L LE L + N F ++ F GL LK L ++ + S+L + F
Sbjct: 343 SLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETF 402
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 81/294 (27%), Positives = 126/294 (42%)
Query: 8 ELRSKCMNPYEPSRFSTRDPSCNLQEANLDVIPSH--------SNPSIQRLVLSTNRIKT 59
EL S + + P F T L N + PS SN SI+ L LS+N++ T
Sbjct: 204 ELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDT 263
Query: 60 VDSAIPIYL---SLQHVDLSHTTWLIIPIGGFE--PQEKLVELQLNHNKHFPQQIVCSII 114
+ L +L +DLS + ++ F P + + L+ N+ +H + +
Sbjct: 264 ISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLS 323
Query: 115 SPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
+ RR+++ R S Q+ LT+L +DD SF +L L L + N
Sbjct: 324 NLRRLDL----RRSFTRQSI--SLTSLP--KIDDF--------SFQWLKCLEYLNMDDNN 367
Query: 175 FTTLADGAFNGLGRLSALDLRGA--GLTNISDNAFRGLSG--LRSLVLTDNRLQSIPTKQ 230
F + F GL RL L L + L +++ F L+G L L LT N++ I +
Sbjct: 368 FPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLNLTKNKISKIQSGA 427
Query: 231 LSKLTRLEELEIGQNGFSMLEAGC-FKGL--------SYLKRLEITGASNLTRV 275
S L LE L++G N G ++GL SY K LE+T ++ T V
Sbjct: 428 FSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELT-TNSFTSV 480
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 71/269 (26%), Positives = 122/269 (45%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSN---PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVD 74
PS F S NL + ++ + + PS++ L L+ N I + A SL +
Sbjct: 50 PSEFPCEASSINLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELK 109
Query: 75 LSHTTWL-IIPIGGFEPQEKLVELQLNHNKHF--PQQIVCSIISPRRVEIFGQNRISRID 131
++H ++ + F +LV+L L F P +I + S + + F QN RI
Sbjct: 110 MAHNEYIRYLHTRTFTALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCF-QNNFRRIP 168
Query: 132 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 191
A G+ L +YL+ N++ +V S L L L + N + + AF G ++
Sbjct: 169 GA-IRGMENLTHVYLERNRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEY 227
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L ++ + +N+F GL L+ L L N L+++ L LE L + +N + +E
Sbjct: 228 LYLNDNLISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIE 287
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAF 280
G F+ L+ L L + ++NLT + F
Sbjct: 288 EGAFENLTSLVSLHLN-SNNLTTLPFSVF 315
Score = 167 (63.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 73/277 (26%), Positives = 117/277 (42%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSF--SESMLAWPELRTIDIAENPIECGCNILWL--RE 355
I GA GLP+L L + N + + + + A L +D+A+ CN+ + R
Sbjct: 94 ITPGAFKGLPSLTELKMAHNEYIRYLHTRTFTALRRLVKLDLAD------CNLFNIPDRI 147
Query: 356 MLVRRNTSAVFC--NS--PAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLV 411
+ + +FC N+ P + + +L+ L + ++ N+ +GL+ L+ L
Sbjct: 148 FIELPSLQELFCFQNNFRRIPGAIRGMENLTHVYL--ERNRIEAVAYNSLQGLTKLKYLN 205
Query: 412 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRK 471
L DNR+ + + ++E L + N S L F GL LK L + G + L V
Sbjct: 206 LQDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSFDGLRCLKMLNL-GGNFLRNVSN 264
Query: 472 GAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPE--LR 529
F D I EE A L +L L+L N T+ S+ P L
Sbjct: 265 TWFRDLVELEVLYLDRNRINYI-EEGAFENLTSLVSLHLNSNNLTTLPFSVFQ-PVYFLG 322
Query: 530 TIDIAENPIECGCNILWLREMLVR-RNTSAVFCNSPA 565
+ + NP EC C I WL+E + R + C SP+
Sbjct: 323 RLYLFRNPWECDCRIEWLKEWMENYRLVRDIPCASPS 359
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/141 (31%), Positives = 68/141 (48%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+NRI + +GLT L+ L L DN++ V +F + L + N+ + L + +F
Sbjct: 184 RNRIEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSF 243
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+GL L L+L G L N+S+ FR L L L L NR+ I LT L L +
Sbjct: 244 DGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLN 303
Query: 244 QNGFSMLEAGCFKGLSYLKRL 264
N + L F+ + +L RL
Sbjct: 304 SNNLTTLPFSVFQPVYFLGRL 324
Score = 139 (54.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 55/206 (26%), Positives = 89/206 (43%)
Query: 46 SIQRLV---LSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNH 101
+++RLV L+ + + I I L SLQ + + IP G E L + L
Sbjct: 126 ALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRIP-GAIRGMENLTHVYLER 184
Query: 102 NKHFPQQIVCSIISPRRVEIFG--QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF 159
N+ S+ +++ NRI+ + + F+G + LYL+DN + +P SF
Sbjct: 185 NR-IEAVAYNSLQGLTKLKYLNLQDNRINVVHERAFQGCRKMEYLYLNDNLISELPENSF 243
Query: 160 IYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLT 219
L L L +G N +++ F L L L L + I + AF L+ L SL L
Sbjct: 244 DGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIEEGAFENLTSLVSLHLN 303
Query: 220 DNRLQSIPTKQLSKLTRLEELEIGQN 245
N L ++P + L L + +N
Sbjct: 304 SNNLTTLPFSVFQPVYFLGRLYLFRN 329
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 187 (70.9 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 70/238 (29%), Positives = 111/238 (46%)
Query: 13 CMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQH 72
C N EP + +T P LQ + IP+ S QR+ L NRI V +A + + ++
Sbjct: 33 CYN--EP-KVTTSCPQQGLQAVPVG-IPAAS----QRIFLHGNRISHVPAAS--FRACRN 82
Query: 73 VDLS--HTTWLI-IPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNR--I 127
+ + H+ L I F L +L L+ N + R+ +R +
Sbjct: 83 LTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL 142
Query: 128 SRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
+ F GL AL+ LYL DN L+++P +F LG L L + N +++ + AF GL
Sbjct: 143 QELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH 202
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQN 245
L L L + ++ +AFR L L +L L N L ++PT+ L+ L L+ L + N
Sbjct: 203 SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 260
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 74/266 (27%), Positives = 109/266 (40%)
Query: 132 QACFEGLTAL-RILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLS 190
QA G+ A + ++L N++ VP SF L L + NV + AF GL L
Sbjct: 49 QAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 108
Query: 191 ALDLR-GAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSM 249
LDL A L ++ F GL L +L L LQ + L L+ L + N
Sbjct: 109 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 168
Query: 250 LEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP 309
L F+ L L L + G + ++ V + AF + A L
Sbjct: 169 LPDDTFRDLGNLTHLFLHG-NRISSVPERAFRGLHSLDRLLLHQNRVAH-VHPHAFRDLG 226
Query: 310 NLYHLNLKENAFTSF-SESMLAWPELRTIDIAENPIECGCNI--LWLREMLVRRNTSAVF 366
L L L N ++ +E++ L+ + + +NP C C LW R ++S V
Sbjct: 227 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP 286
Query: 367 CNSPAPLKYKSLISLSAEDL-GCAGA 391
C+ P L + L L+A DL GCA A
Sbjct: 287 CSLPQRLAGRDLKRLAANDLQGCAVA 312
Score = 151 (58.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 56/207 (27%), Positives = 87/207 (42%)
Query: 63 AIPIYL--SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHN--KHFPQQIVCSIISPRR 118
A+P+ + + Q + L +P F L L L+ N + +
Sbjct: 50 AVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQ 109
Query: 119 VEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTL 178
+++ ++ +D A F GL L L+LD L+ + F L L L + N L
Sbjct: 110 LDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQAL 169
Query: 179 ADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLE 238
D F LG L+ L L G ++++ + AFRGL L L+L NR+ + L RL
Sbjct: 170 PDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLM 229
Query: 239 ELEIGQNGFSML--EA-GCFKGLSYLK 262
L + N S L EA + L YL+
Sbjct: 230 TLYLFANNLSALPTEALAPLRALQYLR 256
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 40/149 (26%), Positives = 60/149 (40%)
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
GL + FRGL+ L+ L L DN LQ++P L L L + N S + F+G
Sbjct: 141 GLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRG 200
Query: 452 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLK 511
L L RL + + + V AF D + E AL L L +L L
Sbjct: 201 LHSLDRL-LLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE-ALAPLRALQYLRLN 258
Query: 512 ENAFTSFSESMLAWPELRTIDIAENPIEC 540
+N + + W L+ + + + C
Sbjct: 259 DNPWVCDCRARPLWAWLQKFRGSSSEVPC 287
>MGI|MGI:94872 [details] [associations]
symbol:Dcn "decorin" species:10090 "Mus musculus" [GO:0005518
"collagen binding" evidence=ISO] [GO:0005539 "glycosaminoglycan
binding" evidence=IDA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005589 "collagen type VI" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0019800
"peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS]
[GO:0047485 "protein N-terminus binding" evidence=ISO] [GO:0050840
"extracellular matrix binding" evidence=IDA] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:94872 GO:GO:0005615 GO:GO:0009612
GO:GO:0007568 GO:GO:0032496 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0001822 GO:GO:0001890 GO:GO:0042060
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0050840
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0007519 GO:GO:0005589 CleanEx:MM_DCN
GO:GO:0005539 GO:GO:0019800 CTD:1634 KO:K04660 OMA:PLGPVCP
OrthoDB:EOG4ZS93P ChiTaRS:DCN EMBL:X53929 IPI:IPI00123196
PIR:A55454 RefSeq:NP_001177380.1 RefSeq:NP_031859.1
UniGene:Mm.56769 ProteinModelPortal:P28654 SMR:P28654 STRING:P28654
PhosphoSite:P28654 PaxDb:P28654 PRIDE:P28654
Ensembl:ENSMUST00000105287 Ensembl:ENSMUST00000163448 GeneID:13179
KEGG:mmu:13179 InParanoid:P28654 NextBio:283292 Bgee:P28654
Genevestigator:P28654 GermOnline:ENSMUSG00000019929 Uniprot:P28654
Length = 354
Score = 184 (69.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/197 (29%), Positives = 95/197 (48%)
Query: 88 FEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLD 147
F P L++LQ N + ++ + I N+IS+I F+ L L LYL
Sbjct: 74 FPPDTTLLDLQNNKITEIKEGAFKNLKDLHTL-ILVNNKISKISPEAFKPLVKLERLYLS 132
Query: 148 DNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTN--ISDN 205
NQL+ +P L ELRV N T L FNGL + ++L G L N I +
Sbjct: 133 KNQLKELPEKM---PRTLQELRVHENEITKLRKSDFNGLNNVLVIELGGNPLKNSGIENG 189
Query: 206 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 265
AF+GL L + ++D + +IP + LT E+ + N + ++A KGL L +L
Sbjct: 190 AFQGLKSLSYIRISDTNITAIPQGLPTSLT---EVHLDGNKITKVDAPSLKGLINLSKLG 246
Query: 266 ITGASNLTRVRKGAFAD 282
++ +++T + G+ A+
Sbjct: 247 LS-FNSITVMENGSLAN 262
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 68/259 (26%), Positives = 108/259 (41%)
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLT 200
LR++ D L VP F L +L+ N T + +GAF L L L L ++
Sbjct: 57 LRVVQCSDLGLDKVPW-DFPPDTTLLDLQN--NKITEIKEGAFKNLKDLHTLILVNNKIS 113
Query: 201 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR-LEELEIGQNGFSMLEAGCFKGLS 259
IS AF+ L L L L+ N+L+ +P K+ R L+EL + +N + L F GL+
Sbjct: 114 KISPEAFKPLVKLERLYLSKNQLKELP----EKMPRTLQELRVHENEITKLRKSDFNGLN 169
Query: 260 YLKRLEITGAS-NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLP-NLYHLNLK 317
+ +E+ G + + GAF I +G LP +L ++L
Sbjct: 170 NVLVIELGGNPLKNSGIENGAF-QGLKSLSYIRISDTNITAIPQG----LPTSLTEVHLD 224
Query: 318 ENAFTSF-SESMLAWPELRTIDIAENPI---ECG--CNILWLREMLVRRNTSAVFCNSPA 371
N T + S+ L + ++ N I E G N+ LRE+ + N A
Sbjct: 225 GNKITKVDAPSLKGLINLSKLGLSFNSITVMENGSLANVPHLRELHLDNNKLLRVPAGLA 284
Query: 372 PLKYKSLISLSAEDLGCAG 390
KY ++ L ++ G
Sbjct: 285 QHKYIQVVYLHNNNISAVG 303
>UNIPROTKB|Q9NR96 [details] [associations]
symbol:TLR9 "Toll-like receptor 9" species:9606 "Homo
sapiens" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0034162 "toll-like receptor 9
signaling pathway" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IDA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IDA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IDA] [GO:0042742 "defense response to bacterium"
evidence=NAS] [GO:0005576 "extracellular region" evidence=NAS]
[GO:0035197 "siRNA binding" evidence=IMP] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
[GO:0005764 "lysosome" evidence=ISS] [GO:0032009 "early phagosome"
evidence=ISS] [GO:0005149 "interleukin-1 receptor binding"
evidence=IPI] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=TAS]
[GO:0008286 "insulin receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0036020
"endolysosome membrane" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0032728 "positive regulation of
interferon-beta production" evidence=ISS] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=ISS] [GO:0002237
"response to molecule of bacterial origin" evidence=TAS]
[GO:0032715 "negative regulation of interleukin-6 production"
evidence=ISS] [GO:0032733 "positive regulation of interleukin-10
production" evidence=ISS] [GO:0032741 "positive regulation of
interleukin-18 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0051770 "positive regulation of nitric-oxide synthase
biosynthetic process" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007252
"I-kappaB phosphorylation" evidence=IDA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=IDA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IDA] [GO:0032722 "positive regulation of
chemokine production" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0030277 "maintenance of gastrointestinal
epithelium" evidence=ISS] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0016323
"basolateral plasma membrane" evidence=IDA] [GO:0016324 "apical
plasma membrane" evidence=IDA] [GO:0043507 "positive regulation of
JUN kinase activity" evidence=IDA] [GO:0043123 "positive regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=IDA] [GO:0046330
"positive regulation of JNK cascade" evidence=IC] [GO:0032717
"negative regulation of interleukin-8 production" evidence=IDA]
[GO:0034122 "negative regulation of toll-like receptor signaling
pathway" evidence=IDA] [GO:0034123 "positive regulation of
toll-like receptor signaling pathway" evidence=IDA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IDA] [GO:0050729 "positive regulation of inflammatory
response" evidence=IC] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027181 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 GO:GO:0016021 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0008286 GO:GO:0005576 GO:GO:0000139
GO:GO:0005789 EMBL:CH471055 GO:GO:0016324 GO:GO:0043123
GO:GO:0042742 GO:GO:0006954 GO:GO:0046330 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0045087
GO:GO:0016323 GO:GO:0032722 GO:GO:0032755 GO:GO:0050729
GO:GO:0030277 GO:GO:0032715 GO:GO:0032009 GO:GO:0032717
GO:GO:0051092 GO:GO:0032757 GO:GO:0002237 GO:GO:0035197
GO:GO:0032088 GO:GO:0034122 GO:GO:0032760 GO:GO:0032735
GO:GO:0042346 GO:GO:0051770 GO:GO:0045078 GO:GO:0032733
GO:GO:0043507 GO:GO:0032728 GO:GO:0007252 DrugBank:DB00608
SUPFAM:SSF52200 GO:GO:0045359 GO:GO:0032741 GO:GO:0034123
GO:GO:0036020 GO:GO:0045356 HOVERGEN:HBG018601 OrthoDB:EOG47SSDD
PANTHER:PTHR24373:SF37 CTD:54106 EMBL:AF259262 EMBL:AF259263
EMBL:AF245704 EMBL:AF246972 EMBL:AF246973 EMBL:AF246974
EMBL:AB045180 EMBL:EU170540 EMBL:EU170541 EMBL:EU170542
EMBL:EU170543 EMBL:AB445673 EMBL:DQ019992 EMBL:DQ019993
EMBL:DQ019994 EMBL:DQ019995 EMBL:DQ019996 EMBL:DQ019999
EMBL:AY359085 EMBL:BC032713 IPI:IPI00010140 IPI:IPI00219487
IPI:IPI00219488 IPI:IPI00219490 IPI:IPI00914987 RefSeq:NP_059138.1
UniGene:Hs.87968 ProteinModelPortal:Q9NR96 SMR:Q9NR96 IntAct:Q9NR96
MINT:MINT-7242147 STRING:Q9NR96 PhosphoSite:Q9NR96 DMDM:20140872
PaxDb:Q9NR96 PRIDE:Q9NR96 DNASU:54106 Ensembl:ENST00000360658
GeneID:54106 KEGG:hsa:54106 UCSC:uc003dda.2 GeneCards:GC03M052255
H-InvDB:HIX0163454 HGNC:HGNC:15633 HPA:HPA004731 MIM:605474
neXtProt:NX_Q9NR96 PharmGKB:PA38010 InParanoid:Q9NR96 KO:K10161
BindingDB:Q9NR96 ChEMBL:CHEMBL5804 GenomeRNAi:54106 NextBio:56466
ArrayExpress:Q9NR96 Bgee:Q9NR96 CleanEx:HS_TLR9
Genevestigator:Q9NR96 GermOnline:ENSG00000173366 Uniprot:Q9NR96
Length = 1032
Score = 134 (52.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 77/333 (23%), Positives = 126/333 (37%)
Query: 270 SNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SM 328
+NL V+ FA + + L L L+L N + E S
Sbjct: 482 NNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSF 541
Query: 329 LAWPELRTIDIAEN--PIEC---GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA 383
P L +D++ N P G N ++ + R+ S N + + + L S S
Sbjct: 542 TELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVS-QQLCSTSL 600
Query: 384 EDLGCAGAGLTNI---SD---NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR-LEELEI 436
L +G L ++ D + F+GLSGL L L+ NRL ++ + L L + L+ L +
Sbjct: 601 RALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRL 660
Query: 437 GQNGFSMLEAGCFKGLSYLKRLEITG-ASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIE 495
N + + + L +L +LE+ A N + +
Sbjct: 661 RDNYLAFFK---WWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVA 717
Query: 496 EDALVGLPNLYHLNLKENAFTSFSESMLAWP---ELRTIDIAENPIECGCNILWLREML- 551
L LNL NA + S P L+ +D++ NP+ C C ++ +L
Sbjct: 718 PGFFSKAKELRELNLSANALKTVDHSWFG-PLASALQILDVSANPLHCACGAAFMDFLLE 776
Query: 552 ----VRRNTSAVFCNSPAPLKYKSLISLSAEDL 580
V S V C SP L+ +S+ A+DL
Sbjct: 777 VQAAVPGLPSRVKCGSPGQLQG---LSIFAQDL 806
Score = 108 (43.1 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 75/277 (27%), Positives = 111/277 (40%)
Query: 13 CMNPYEPSRFSTRDP--SCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYL-S 69
C EPS F NL N+ +P+ S+ L LS I +DSA L +
Sbjct: 110 CHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHA 168
Query: 70 LQHVDLSHTTW--------LIIPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRV 119
L+ + + + L + G L L L +N P+ + S+
Sbjct: 169 LRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSL----EY 224
Query: 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
+ NRI ++ LTALR+L + N R P+ E F L
Sbjct: 225 LLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPN-----PCMECP---RHFPQLH 276
Query: 180 DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI--PTKQLSKLTRL 237
F+ L RL L L+ + L+ ++ + FRGL LR L L++N L TK LT+L
Sbjct: 277 PDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQL 336
Query: 238 EELEIGQN-----GFSMLE-AGCFKGLSYLKRLEITG 268
+L + N F+ L A F L LK L++ G
Sbjct: 337 RKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHG 373
Score = 37 (18.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+GL + L L+ + + S A RG + SL L+ NR+ + + L L L +
Sbjct: 40 HGLVNCNWLFLKS--VPHFSMAAPRG--NVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLK 95
Query: 244 QN 245
N
Sbjct: 96 WN 97
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 190 (71.9 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 105/438 (23%), Positives = 166/438 (37%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N IS+++ + L L IL L N++ + +FI+ L EL + N + +
Sbjct: 84 GFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDP 143
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL--TRLEEL 240
F L L LDL GL++ L L+ L+L++N++ S+ + L + L+ L
Sbjct: 144 FKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGNSSLKRL 203
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGAS-NLTRVRKGAFADXXXXXXXXXXXXXXXXX 299
E+ N GCF L L L + A + + K
Sbjct: 204 ELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDT 263
Query: 300 IEEGALVGLP--NLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIE-CGCNILWLRE 355
I GL NL L+L N+ AW P L + + N IE +
Sbjct: 264 ISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLS 323
Query: 356 MLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN 415
L R + F + ISL++ L I D +F+ L L L + DN
Sbjct: 324 NLRRLDLRRSFT--------RQSISLTS---------LPKIDDFSFQWLKCLEYLNMDDN 366
Query: 416 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEA---GCFKGLSY--LKRLEITGASNLTRVR 470
I + L RL+ L + N FS L F L+ L L++T + +++++
Sbjct: 367 NFPGIKRNTFTGLVRLKFLSLS-NSFSSLRTLTNETFLSLAGCPLLLLDLT-KNKISKIQ 424
Query: 471 KGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNL---Y-----HLNLKENAFTS---FS 519
GAF+ + GL N+ Y +L L N+FTS
Sbjct: 425 SGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSVPSLQ 484
Query: 520 ESMLAWPELRTIDIAENP 537
ML L+ +D + +P
Sbjct: 485 RLMLRRVALKNVDCSPSP 502
Score = 185 (70.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 139/579 (24%), Positives = 229/579 (39%)
Query: 28 SCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIG 86
S ++Q+ D P + ++ +L LS N + + + L +LQ + LS+ + G
Sbjct: 133 SNSIQKIKND--PFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSNNKISSLTPG 190
Query: 87 GFE----PQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRI-SRIDQACFE-GLTA 140
F+ K +EL N K F ++ + + S ++ C E T+
Sbjct: 191 EFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTS 250
Query: 141 LRILYLDDNQLRSVPTPSFIYLGM--LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198
+ L L NQL ++ +F L L L + N + + +F L L L L
Sbjct: 251 IENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNN 310
Query: 199 LTNISDNAFRGLSGLRSLVLTDN-RLQSIPTKQLSK--------LTRLEELEIGQNGFSM 249
+ ++S +F GLS LR L L + QSI L K L LE L + N F
Sbjct: 311 IEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEYLNMDDNNFPG 370
Query: 250 LEAGCFKGLSYLKRLEITGA-SNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGL 308
++ F GL LK L ++ + S+L + F +L G
Sbjct: 371 IKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFL----------------------SLAGC 408
Query: 309 PNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCNILWLREMLVRRNTSAVFC 367
P L L+L +N + +W L +D+ N E G + +E N ++
Sbjct: 409 PLLL-LDLTKNKISKIQSGAFSWLGHLEVLDLGLN--EIGQELTG-QEWRGLDNIVEIYL 464
Query: 368 --NSPAPLKYKSLISL-SAEDLGCAGAGLTNI--SDNAFRGLSGLRSLVLTDNRLQSIPT 422
N L S S+ S + L L N+ S + FR L L L L++N + +I
Sbjct: 465 SYNKYLELTTNSFTSVPSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANIND 524
Query: 423 KQLSKLTRLEELEIGQNGFSML----EAG----CFKGLSYLKRLEITGASNLTRVRKGAF 474
+ L L +LE L++ N + L G KGL +L L + G++ + AF
Sbjct: 525 ELLKGLEKLEILDLQHNNLARLWKHANPGGPVQFLKGLFHLHILNL-GSNGFDEIPVEAF 583
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESML--AWPELRTID 532
D I+ + +L L+L++N TS +++ A+ L +D
Sbjct: 584 KDLRELKSIDLGMNNLN-ILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYLD 642
Query: 533 IAENPIECGC-NILWLREML--VRRNTSAV----FCNSP 564
+ NP +C C +I W + N S + CN+P
Sbjct: 643 MRFNPFDCTCESIAWFVNWINITHTNISELSNHYLCNTP 681
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 90/360 (25%), Positives = 142/360 (39%)
Query: 139 TALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG 198
T + +L L NQLR +P +F L L G N + L L L L+L+
Sbjct: 52 TNITVLNLTHNQLRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNE 111
Query: 199 LTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL 258
++ +SD F L L L N +Q I L L +L++ NG S + G L
Sbjct: 112 ISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQL 171
Query: 259 SYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE--EGALVGLPNLYHLNL 316
L+ L ++ + ++ + G F D E G L L L+L
Sbjct: 172 ENLQELLLSN-NKISSLTPGEF-DFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGLSL 229
Query: 317 KENAFT-SFSESM---LAWPELRTIDIAENPIEC-------GCNILWLREMLVRRNTSAV 365
+ S +E + L+ + + ++ N ++ G L + + RN+ V
Sbjct: 230 NNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRV 289
Query: 366 FCN-SPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDN-RLQSIPTK 423
N S A L + +SL ++ ++S +F GLS LR L L + QSI
Sbjct: 290 MGNDSFAWLPHLEYLSLEYNNI-------EHLSSRSFYGLSNLRRLDLRRSFTRQSISLT 342
Query: 424 QLSK--------LTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA-SNLTRVRKGAF 474
L K L LE L + N F ++ F GL LK L ++ + S+L + F
Sbjct: 343 SLPKIDDFSFQWLKCLEYLNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETF 402
Score = 151 (58.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 83/335 (24%), Positives = 127/335 (37%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N++ R+ A F + L L N + + L L L + N + L+D F
Sbjct: 62 NQLRRLPPANFTRYSQLTTLDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTFI 121
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQ 244
L+ L L + I ++ F+ L L L L+ N L S +L L+EL +
Sbjct: 122 FCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLSN 181
Query: 245 NGFSMLEAGCFK--GLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEE 302
N S L G F G S LKRLE++ ++ + G F + E
Sbjct: 182 NKISSLTPGEFDFLGNSSLKRLELS-SNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTE 240
Query: 303 GALVGLPN--LYHLNLKENAFTSFSESM---LAWPELRTIDIAENPIECGCN--ILWLRE 355
+ L N + +L+L N + S + L L T+D++ N + N WL
Sbjct: 241 KLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPH 300
Query: 356 M----LVRRNTSAVFCNSPAPLKYKSLISL--SAEDLGCAGAGLTNISDNAFRGLSGLRS 409
+ L N + S L + L S + L I D +F+ L L
Sbjct: 301 LEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEY 360
Query: 410 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L + DN I + L RL+ L + N FS L
Sbjct: 361 LNMDDNNFPGIKRNTFTGLVRLKFLSLS-NSFSSL 394
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 81/294 (27%), Positives = 126/294 (42%)
Query: 8 ELRSKCMNPYEPSRFSTRDPSCNLQEANLDVIPSH--------SNPSIQRLVLSTNRIKT 59
EL S + + P F T L N + PS SN SI+ L LS+N++ T
Sbjct: 204 ELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLDT 263
Query: 60 VDSAIPIYL---SLQHVDLSHTTWLIIPIGGFE--PQEKLVELQLNHNKHFPQQIVCSII 114
+ L +L +DLS + ++ F P + + L+ N+ +H + +
Sbjct: 264 ISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPHLEYLSLEYNNIEHLSSRSFYGLS 323
Query: 115 SPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNV 174
+ RR+++ R S Q+ LT+L +DD SF +L L L + N
Sbjct: 324 NLRRLDL----RRSFTRQSI--SLTSLP--KIDDF--------SFQWLKCLEYLNMDDNN 367
Query: 175 FTTLADGAFNGLGRLSALDLRGA--GLTNISDNAFRGLSG--LRSLVLTDNRLQSIPTKQ 230
F + F GL RL L L + L +++ F L+G L L LT N++ I +
Sbjct: 368 FPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLDLTKNKISKIQSGA 427
Query: 231 LSKLTRLEELEIGQNGFSMLEAGC-FKGL--------SYLKRLEITGASNLTRV 275
S L LE L++G N G ++GL SY K LE+T ++ T V
Sbjct: 428 FSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELT-TNSFTSV 480
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 190 (71.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 117/500 (23%), Positives = 205/500 (41%)
Query: 54 TNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVC 111
TN + + S IP Y + H++L+H ++P F LV+L+L N +
Sbjct: 92 TNLTEAI-SDIPRYTT--HLNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFR 148
Query: 112 SIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSF---IYLGMLAEL 168
+ + + + +N+I ++ + FEGL++L+ L L NQ+ + +F I L L+
Sbjct: 149 GLENLTLLNLV-ENKIQSVNNS-FEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLS 206
Query: 169 RVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT 228
R ++ F+ + + A L L LDL + + D++ R L L L N+L+ +
Sbjct: 207 RNNISDFSGILE-AVQHLPCLERLDLTNNSIMYL-DHSPRSLVSLTHLSFEGNKLRELNF 264
Query: 229 KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS-NLTRVRKGAFADXXXXX 287
LS L L L +NG +++ K L LK L ++G L + +
Sbjct: 265 SALS-LPNLTNLSASRNGNKVIQNVYLKTLPQLKSLNLSGTVIKLENLSAKHLQNLRAMD 323
Query: 288 XXXXXXXXXXXXIEEGA-LVG-LPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPI 344
++ L+G LP L L ++N + LA L +D+ +N
Sbjct: 324 LSNWELRHGHLDMKTVCHLLGNLPKLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQNSD 383
Query: 345 -----ECGCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDN 399
+ N L + L F N+ + SL +L++ DL + + D
Sbjct: 384 LIYLNDSEFNALPSLQKLNLNKCQLSFINNRT---WSSLQNLTSLDL--SHNKFKSFPDF 438
Query: 400 AFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLE 459
AF L L L L+ N + + S L L+EL + ++ F L+ L+
Sbjct: 439 AFSPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLD 498
Query: 460 ITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFS 519
+ G +N+ + G F I+E ++ GL NL L+L N+ + F
Sbjct: 499 L-GDNNIRTLNHGTFRPLKKLQSLILSHNCLK-ILEPNSFSGLTNLRSLDLMYNSLSYFH 556
Query: 520 ESMLAWPE-LRTIDIAENPI 538
E + + E L + + N I
Sbjct: 557 EHLFSGLEKLLILKLGFNKI 576
Score = 175 (66.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 87/356 (24%), Positives = 149/356 (41%)
Query: 123 GQNR-ISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 181
GQN + ++ + F L +L+ L L+ QL + ++ L L L + N F + D
Sbjct: 379 GQNSDLIYLNDSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDF 438
Query: 182 AFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 241
AF+ L L L L +T +++ AF GL L+ L L + +I ++ LE L+
Sbjct: 439 AFSPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLD 498
Query: 242 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIE 301
+G N L G F+ L L+ L I + L + +F+
Sbjct: 499 LGDNNIRTLNHGTFRPLKKLQSL-ILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSY-FH 556
Query: 302 EGALVGLPNLYHLNLKENAFTSFSESMLAWPE-LRTIDIAENPIEC---GCNIL------ 351
E GL L L L N T + L +P ++ + + +E G ++
Sbjct: 557 EHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFFQ 616
Query: 352 ---WLREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNA--FRGLSG 406
L+E+L+ +N S VF + ++ LI+L+ D+ G ++ NA F+ L
Sbjct: 617 GLGSLQELLLGKNPS-VFLDHH---QFDPLINLTKLDISGTKDGDRSLYLNASLFQNLKR 672
Query: 407 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
L+ L L +N L+S+ S L L+ + N ++ K L L ++ G
Sbjct: 673 LKILRLENNNLESLVPDMFSSLQSLQVFSLRFNNLKVINQSHLKNLKSLMFFDVYG 728
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 103/433 (23%), Positives = 178/433 (41%)
Query: 50 LVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQI 109
L L N+I++V+++ SL+ + LSH I F P KL L L+ N
Sbjct: 156 LNLVENKIQSVNNSFEGLSSLKTLLLSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSG 215
Query: 110 VCSIIS--P--RRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGML 165
+ + P R+++ N I +D + L +L L + N+LR + S + L L
Sbjct: 216 ILEAVQHLPCLERLDLTN-NSIMYLDHSP-RSLVSLTHLSFEGNKLRELNF-SALSLPNL 272
Query: 166 AELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQS 225
L N + + L +L +L+L G + + + + + L LR++ L++ L+
Sbjct: 273 TNLSASRNGNKVIQNVYLKTLPQLKSLNLSGT-VIKLENLSAKHLQNLRAMDLSNWELRH 331
Query: 226 --IPTKQ----LSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL---EITGASNLTRVR 276
+ K L L +LE L +N + A K L+ RL ++ S+L +
Sbjct: 332 GHLDMKTVCHLLGNLPKLETLVFQKN---VTNAEGIKQLAKCTRLLFLDLGQNSDLIYLN 388
Query: 277 KGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELR 335
F + I L NL L+L N F SF + + L
Sbjct: 389 DSEF-NALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFKSFPDFAFSPLKHLE 447
Query: 336 TIDIAENPIECGCNILWLREMLVRR-NTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
+ ++ NPI N+ + ++ N +A + + + +L DLG +
Sbjct: 448 FLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLG--DNNIR 505
Query: 395 NISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSY 454
++ FR L L+SL+L+ N L+ + S LT L L++ N S F GL
Sbjct: 506 TLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEK 565
Query: 455 LKRLEITGASNLT 467
L L++ G + +T
Sbjct: 566 LLILKL-GFNKIT 577
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 62/254 (24%), Positives = 101/254 (39%)
Query: 123 GQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGA 182
G N I ++ F L L+ L L N L+ + SF L L L + N + +
Sbjct: 500 GDNNIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHL 559
Query: 183 FNGLGRLSALDLRGAGLT-----NISDNAFRGLSGLRSLVLTDNR--LQSIPTKQLSKLT 235
F+GL +L L L +T + F L L+ L L R +Q +P+ L
Sbjct: 560 FSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQVVPSNFFQGLG 619
Query: 236 RLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR---VRKGAFADXXXXXXXXXX 292
L+EL +G+N L+ F L L +L+I+G + R + F +
Sbjct: 620 SLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNASLFQNLKRLKILRLE 679
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNIL 351
+ + L +L +L+ N ++S L L D+ N ++C C+ L
Sbjct: 680 NNNLESLVPD-MFSSLQSLQVFSLRFNNLKVINQSHLKNLKSLMFFDVYGNKLQCTCDNL 738
Query: 352 WLREMLVRRNTSAV 365
W + + NT V
Sbjct: 739 WFKNWSM--NTEEV 750
>UNIPROTKB|F1RW91 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060658 "nipple morphogenesis" evidence=IEA]
[GO:0060427 "lung connective tissue development" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002172 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 GO:GO:0016021 GO:GO:0030154 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
GO:GO:0007188 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 OMA:YTLTTRP GO:GO:0060658
GeneTree:ENSGT00650000093266 EMBL:CU896689 EMBL:AEMK01185779
EMBL:CU467602 Ensembl:ENSSSCT00000009716 Uniprot:F1RW91
Length = 770
Score = 188 (71.2 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 81/336 (24%), Positives = 135/336 (40%)
Query: 63 AIPIYLSLQHVDLSHTTWLII---PIGGFEPQEKLVELQLNHNKHFPQQIVC--SIISPR 117
A+P S +V L W +I P GF+ L +L L +NK + + S
Sbjct: 132 AVPSVSS--NVTLMSLQWNLIRKLPPDGFKKYHDLQKLCLQNNKIRSVSVYAFRGLYSLT 189
Query: 118 RVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTT 177
++ + NRI+ + FE L L L ++DN L + +F L L L + NV T
Sbjct: 190 KLYL-SHNRITFLKPGVFEDLHRLEWLIIEDNHLNRISPLTFYGLNSLILLVLMNNVLTH 248
Query: 178 LADGAF-NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR 236
L D + RL LD G + N+ + F S L LV+ N++ + + L +
Sbjct: 249 LPDKPLCQHMPRLHWLDFEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQK 308
Query: 237 LEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXX 296
L+EL++G N L FK L L +L ++ + + +++ F D
Sbjct: 309 LDELDLGSNKIENLSPHVFKDLKELSQLNLS-YNPIQKIQANQF-DYLVKLKSLSLEGLE 366
Query: 297 XXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAW-PELRTIDIAENPIECGCN--ILWL 353
I++ L NL H+ K+ + ++ + + P I EN + +W+
Sbjct: 367 ISNIQQRMFRPLTNLSHIYFKKFQYCGYAPHVRSCKPNTDGISSLENLLASIIQRVFVWV 426
Query: 354 REMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLGCA 389
+ V C P L ++S L CA
Sbjct: 427 VSAVTCFGNIFVICMRPYIRSENKLHAMSIISLCCA 462
Score = 170 (64.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 66/273 (24%), Positives = 117/273 (42%)
Query: 11 SKCMNPYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLS 69
S+C+ P + R + E NL +PS S+ ++ + L N I+ + Y
Sbjct: 105 SECLVGSVPMQCLCRGLELDCDETNLRAVPSVSS-NVTLMSLQWNLIRKLPPDGFKKYHD 163
Query: 70 LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRIS 128
LQ + L + + + F L +L L+HN+ F + V + I N ++
Sbjct: 164 LQKLCLQNNKIRSVSVYAFRGLYSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLN 223
Query: 129 RIDQACFEGLTALRILYLDDNQLRSVPT-PSFIYLGMLAELRVGLNVFTTLADGAFNGLG 187
RI F GL +L +L L +N L +P P ++ L L N L + F
Sbjct: 224 RISPLTFYGLNSLILLVLMNNVLTHLPDKPLCQHMPRLHWLDFEGNHIHNLRNLTFISCS 283
Query: 188 RLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGF 247
L+ L +R + ++++N F L L L L N+++++ L L +L + N
Sbjct: 284 NLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLSPHVFKDLKELSQLNLSYNPI 343
Query: 248 SMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
++A F L LK L + G ++ +++ F
Sbjct: 344 QKIQANQFDYLVKLKSLSLEGLE-ISNIQQRMF 375
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 56/223 (25%), Positives = 99/223 (44%)
Query: 47 IQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQL--NH-N 102
+Q+L L N+I++V A SL + LSH + G FE +L L + NH N
Sbjct: 164 LQKLCLQNNKIRSVSVYAFRGLYSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLN 223
Query: 103 KHFPQQIVCSIISPRRVEIFGQNRISRI-DQACFEGLTALRILYLDDNQLRSVPTPSFIY 161
+ P + ++ + + N ++ + D+ + + L L + N + ++ +FI
Sbjct: 224 RISP--LTFYGLNSLILLVLMNNVLTHLPDKPLCQHMPRLHWLDFEGNHIHNLRNLTFIS 281
Query: 162 LGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDN 221
L L + N L + F L +L LDL + N+S + F+ L L L L+ N
Sbjct: 282 CSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLSPHVFKDLKELSQLNLSYN 341
Query: 222 RLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+Q I Q L +L+ L + S ++ F+ L+ L +
Sbjct: 342 PIQKIQANQFDYLVKLKSLSLEGLEISNIQQRMFRPLTNLSHI 384
Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
Identities = 61/256 (23%), Positives = 105/256 (41%)
Query: 211 SGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
S + + L N ++ +P K L++L + N + F+GL L +L ++ +
Sbjct: 138 SNVTLMSLQWNLIRKLPPDGFKKYHDLQKLCLQNNKIRSVSVYAFRGLYSLTKLYLSH-N 196
Query: 271 NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLA 330
+T ++ G F D I GL +L L L N T + L
Sbjct: 197 RITFLKPGVFEDLHRLEWLIIEDNHLNR-ISPLTFYGLNSLILLVLMNNVLTHLPDKPLC 255
Query: 331 --WPELRTIDIAENPIECGCNILW-----LREMLVRRNT-SAVFCNSPAPLKYKSLISLS 382
P L +D N I N+ + L +++R+N + + N+ APL+ L
Sbjct: 256 QHMPRLHWLDFEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQ-----KLD 310
Query: 383 AEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFS 442
DLG + N+S + F+ L L L L+ N +Q I Q L +L+ L + S
Sbjct: 311 ELDLG--SNKIENLSPHVFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGLEIS 368
Query: 443 MLEAGCFKGLSYLKRL 458
++ F+ L+ L +
Sbjct: 369 NIQQRMFRPLTNLSHI 384
>UNIPROTKB|H0Y858 [details] [associations]
symbol:H0Y858 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034162
"toll-like receptor 9 signaling pathway" evidence=IEA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0050707 "regulation of
cytokine secretion" evidence=IEA] [GO:0050729 "positive regulation
of inflammatory response" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR002108
InterPro:IPR027181 Pfam:PF00241 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51263 PROSITE:PS51450 SMART:SM00102 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24373:SF37 OMA:VGGNCRR EMBL:AC097637
ProteinModelPortal:H0Y858 Ensembl:ENST00000494383 Uniprot:H0Y858
Length = 1186
Score = 134 (52.2 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 77/333 (23%), Positives = 126/333 (37%)
Query: 270 SNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSE-SM 328
+NL V+ FA + + L L L+L N + E S
Sbjct: 636 NNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSF 695
Query: 329 LAWPELRTIDIAEN--PIEC---GCNILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA 383
P L +D++ N P G N ++ + R+ S N + + + L S S
Sbjct: 696 TELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVS-QQLCSTSL 754
Query: 384 EDLGCAGAGLTNI---SD---NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTR-LEELEI 436
L +G L ++ D + F+GLSGL L L+ NRL ++ + L L + L+ L +
Sbjct: 755 RALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRL 814
Query: 437 GQNGFSMLEAGCFKGLSYLKRLEITG-ASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIE 495
N + + + L +L +LE+ A N + +
Sbjct: 815 RDNYLAFFK---WWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVA 871
Query: 496 EDALVGLPNLYHLNLKENAFTSFSESMLAWP---ELRTIDIAENPIECGCNILWLREML- 551
L LNL NA + S P L+ +D++ NP+ C C ++ +L
Sbjct: 872 PGFFSKAKELRELNLSANALKTVDHSWFG-PLASALQILDVSANPLHCACGAAFMDFLLE 930
Query: 552 ----VRRNTSAVFCNSPAPLKYKSLISLSAEDL 580
V S V C SP L+ +S+ A+DL
Sbjct: 931 VQAAVPGLPSRVKCGSPGQLQG---LSIFAQDL 960
Score = 108 (43.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 75/277 (27%), Positives = 111/277 (40%)
Query: 13 CMNPYEPSRFSTRDP--SCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYL-S 69
C EPS F NL N+ +P+ S+ L LS I +DSA L +
Sbjct: 264 CHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPK-SLISLSLSHTNILMLDSASLAGLHA 322
Query: 70 LQHVDLSHTTW--------LIIPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRV 119
L+ + + + L + G L L L +N P+ + S+
Sbjct: 323 LRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSL----EY 378
Query: 120 EIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLA 179
+ NRI ++ LTALR+L + N R P+ E F L
Sbjct: 379 LLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPN-----PCMECP---RHFPQLH 430
Query: 180 DGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI--PTKQLSKLTRL 237
F+ L RL L L+ + L+ ++ + FRGL LR L L++N L TK LT+L
Sbjct: 431 PDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQL 490
Query: 238 EELEIGQN-----GFSMLE-AGCFKGLSYLKRLEITG 268
+L + N F+ L A F L LK L++ G
Sbjct: 491 RKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHG 527
Score = 37 (18.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
+GL + L L+ + + S A RG + SL L+ NR+ + + L L L +
Sbjct: 194 HGLVNCNWLFLKS--VPHFSMAAPRG--NVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLK 249
Query: 244 QN 245
N
Sbjct: 250 WN 251
>UNIPROTKB|E9PTD9 [details] [associations]
symbol:Tlr2 "Toll-like receptor" species:10116 "Rattus
norvegicus" [GO:0002238 "response to molecule of fungal origin"
evidence=IEA] [GO:0002687 "positive regulation of leukocyte
migration" evidence=IEA] [GO:0002752 "cell surface pattern
recognition receptor signaling pathway" evidence=IEA] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0007252
"I-kappaB phosphorylation" evidence=IEA] [GO:0008329 "pattern
recognition receptor activity" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0032695 "negative
regulation of interleukin-12 production" evidence=IEA] [GO:0032700
"negative regulation of interleukin-17 production" evidence=IEA]
[GO:0032722 "positive regulation of chemokine production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0034123 "positive regulation of toll-like receptor signaling
pathway" evidence=IEA] [GO:0034134 "toll-like receptor 2 signaling
pathway" evidence=IEA] [GO:0035354 "Toll-like receptor 1-Toll-like
receptor 2 protein complex" evidence=IEA] [GO:0035355 "Toll-like
receptor 2-Toll-like receptor 6 protein complex" evidence=IEA]
[GO:0042346 "positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0042495 "detection of triacyl bacterial
lipopeptide" evidence=IEA] [GO:0042496 "detection of diacyl
bacterial lipopeptide" evidence=IEA] [GO:0042497 "triacyl
lipopeptide binding" evidence=IEA] [GO:0042498 "diacyl lipopeptide
binding" evidence=IEA] [GO:0042535 "positive regulation of tumor
necrosis factor biosynthetic process" evidence=IEA] [GO:0042834
"peptidoglycan binding" evidence=IEA] [GO:0042892 "chloramphenicol
transport" evidence=IEA] [GO:0044130 "negative regulation of growth
of symbiont in host" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0050715 "positive
regulation of cytokine secretion" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0051637
"Gram-positive bacterial cell surface binding" evidence=IEA]
[GO:0052063 "induction by symbiont of defense-related host nitric
oxide production" evidence=IEA] [GO:0060907 "positive regulation of
macrophage cytokine production" evidence=IEA] [GO:0070891
"lipoteichoic acid binding" evidence=IEA] [GO:0071223 "cellular
response to lipoteichoic acid" evidence=IEA] [GO:0071224 "cellular
response to peptidoglycan" evidence=IEA] [GO:0071726 "cellular
response to diacyl bacterial lipopeptide" evidence=IEA] [GO:0071727
"cellular response to triacyl bacterial lipopeptide" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR017241
InterPro:IPR027185 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:735138 GO:GO:0016021
GO:GO:0005737 GO:GO:0009897 GO:GO:0050830 GO:GO:0050715
GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0032722 GO:GO:0032755
GO:GO:0002687 GO:GO:0044130 GO:GO:0051092 GO:GO:0032757
GO:GO:0045429 GO:GO:0004888 GO:GO:0030177 GO:GO:0042834
GO:GO:0032695 GO:GO:0032760 GO:GO:0002755 GO:GO:0002238
GO:GO:0008329 GO:GO:0042535 GO:GO:0042346 GO:GO:0070891
GO:GO:0071223 GO:GO:0051637 GO:GO:0060907 GO:GO:0002752
GO:GO:0007252 SUPFAM:SSF52200 GO:GO:0032700 GO:GO:0071224
GeneTree:ENSGT00700000104367 GO:GO:0035354 GO:GO:0071727
GO:GO:0042495 GO:GO:0042497 PANTHER:PTHR24365:SF17 GO:GO:0035355
GO:GO:0042498 GO:GO:0071726 GO:GO:0042892 GO:GO:0042496
GO:GO:0052063 GO:GO:0034123 IPI:IPI00400619
Ensembl:ENSRNOT00000013025 OMA:RENAIST Uniprot:E9PTD9
Length = 784
Score = 134 (52.2 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 46/181 (25%), Positives = 78/181 (43%)
Query: 167 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 226
+L + N T + G L L L +G+ I +AF L L L L++N L S+
Sbjct: 56 KLDLSFNKITYIGHGDLRACVNLRVLTLESSGINTIEGDAFYSLGSLEHLDLSNNHLSSL 115
Query: 227 PTKQLSKLTRLEELEIGQNGFSML-EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 285
+ L+ L+ L + N + L E F L+ L+ L + + +R+ FA
Sbjct: 116 SSSWFRPLSSLKYLNLMGNPYRTLGETSLFSNLTNLQNLRVGNVDTFSEIRRIDFAGLTS 175
Query: 286 XXXXXXXXXXXXXXIEEGALVGLPNLYHL--NLKENAFTS--FSE--SMLAWPELRTIDI 339
E +L + ++YHL +L E+AF F++ S + + ELR ++
Sbjct: 176 LNELEIQVLSLGNY-ESRSLQSIRDIYHLTLHLSESAFLLGIFADILSSVRYLELRDTNL 234
Query: 340 A 340
A
Sbjct: 235 A 235
Score = 107 (42.7 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 54/208 (25%), Positives = 84/208 (40%)
Query: 209 GLSGLRSLVLTDNRLQSI-PTKQ-LSKLTRLEELEIGQNGFSMLEAGC-FKGLSYLKRLE 265
G L+SLVL+ N L+SI T + L L L L+I +N F + C + G L
Sbjct: 385 GWPSLQSLVLSQNHLRSIRKTAEILLTLKNLTALDISKNSFQPMPDSCQWPGKMRFLNLS 444
Query: 266 ITGASNL-TRVRKGA----FADXXXXXXXXXXXXXXXXXIEEGALVGLPN------LYHL 314
TG + T + + ++ I L LP L +
Sbjct: 445 STGIQAVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPEASLFPVLQVM 504
Query: 315 NLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL---REMLVRRNTS---AVFC 367
++ENA ++FS+ L ++P+L T++ +N C C +L R LV + C
Sbjct: 505 KIRENAISTFSKDQLGSFPKLETLEAGDNHFICSCELLSFILERPALVHVLVDWPDSYLC 564
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTN 395
+SP L + L L C A L +
Sbjct: 565 DSPPRLHGQRLQDARPSVLECHQAALVS 592
Score = 103 (41.3 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 42/158 (26%), Positives = 69/158 (43%)
Query: 403 GLSGLRSLVLTDNRLQSI-PTKQ-LSKLTRLEELEIGQNGFSMLEAGC-FKGLSYLKRLE 459
G L+SLVL+ N L+SI T + L L L L+I +N F + C + G L
Sbjct: 385 GWPSLQSLVLSQNHLRSIRKTAEILLTLKNLTALDISKNSFQPMPDSCQWPGKMRFLNLS 444
Query: 460 ITGASNL-TRVRKGA----FADXXXXXXXXXXXXXXXXIIEEDALVGLPN------LYHL 508
TG + T + + ++ I + L LP L +
Sbjct: 445 STGIQAVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPEASLFPVLQVM 504
Query: 509 NLKENAFTSFSESML-AWPELRTIDIAENPIECGCNIL 545
++ENA ++FS+ L ++P+L T++ +N C C +L
Sbjct: 505 KIRENAISTFSKDQLGSFPKLETLEAGDNHFICSCELL 542
Score = 100 (40.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/120 (26%), Positives = 56/120 (46%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N+I+ I LR+L L+ + + ++ +F LG L L + N ++L+ F
Sbjct: 62 NKITYIGHGDLRACVNLRVLTLESSGINTIEGDAFYSLGSLEHLDLSNNHLSSLSSSWFR 121
Query: 185 GLGRLSALDLRGAGLTNISDNA-FRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L L L+L G + + + F L+ L++L + + + I + LT L ELEI
Sbjct: 122 PLSSLKYLNLMGNPYRTLGETSLFSNLTNLQNLRVGNVDTFSEIRRIDFAGLTSLNELEI 181
Score = 90 (36.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 45/194 (23%), Positives = 75/194 (38%)
Query: 175 FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
FT++ G LDL +T I R LR L L + + +I L
Sbjct: 43 FTSIPSGL---TANTKKLDLSFNKITYIGHGDLRACVNLRVLTLESSGINTIEGDAFYSL 99
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 294
LE L++ N S L + F+ LS LK L + G T F++
Sbjct: 100 GSLEHLDLSNNHLSSLSSSWFRPLSSLKYLNLMGNPYRTLGETSLFSNLTNLQNLRVGNV 159
Query: 295 XXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPELR--TIDIAENPIECG--CN 349
I GL +L L ++ + ++ S S+ + ++ T+ ++E+ G +
Sbjct: 160 DTFSEIRRIDFAGLTSLNELEIQVLSLGNYESRSLQSIRDIYHLTLHLSESAFLLGIFAD 219
Query: 350 ILWLREMLVRRNTS 363
IL L R+T+
Sbjct: 220 ILSSVRYLELRDTN 233
Score = 74 (31.1 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 51/213 (23%), Positives = 94/213 (44%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH 104
+++ L L ++ I T++ L SL+H+DLS+ + F P L L L N +
Sbjct: 77 NLRVLTLESSGINTIEGDAFYSLGSLEHLDLSNNHLSSLSSSWFRPLSSLKYLNLMGNPY 136
Query: 105 FP---QQIVCSIISPRRVEIFGQNRISRIDQACFEGLTAL-----RILYLDDNQLRSVPT 156
+ ++ + + + + + S I + F GLT+L ++L L + + RS+ +
Sbjct: 137 RTLGETSLFSNLTNLQNLRVGNVDTFSEIRRIDFAGLTSLNELEIQVLSLGNYESRSLQS 196
Query: 157 PSFIY-LGM-LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI--SDNAFRGL-S 211
IY L + L+E L +F + L + L+LR L S+ + + S
Sbjct: 197 IRDIYHLTLHLSESAFLLGIFADI-------LSSVRYLELRDTNLARFQFSELSVDEINS 249
Query: 212 GLRSLVLTDNRLQSIPTKQLSKLTR--LEELEI 242
++ L + L +L KL R LE +E+
Sbjct: 250 PMKKLAFRNADLTDKSFNELLKLLRYILELMEV 282
Score = 38 (18.4 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 513 NAFTSFSESMLAWPELRTIDIAEN 536
+AF S+SE W E + EN
Sbjct: 642 DAFVSYSEQDSYWVENLMVQQLEN 665
Score = 38 (18.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 502 LPNLYHLNLKENAFTS--FSESML--AWPELRTIDIAEN 536
L +L L+L EN S WP L+++ +++N
Sbjct: 359 LKSLEFLDLSENLMVEEYLKNSACEGGWPSLQSLVLSQN 397
>UNIPROTKB|E9PCA3 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0030154 GO:GO:0004930 GO:GO:0007189 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007567
InterPro:IPR000372 SMART:SM00013 EMBL:AC107219 GO:GO:0060427
HGNC:HGNC:19718 GO:GO:0060658 EMBL:AC019341 EMBL:AC107056
EMBL:AC108017 EMBL:AC121161 EMBL:AC125489 IPI:IPI00965023
ProteinModelPortal:E9PCA3 SMR:E9PCA3 Ensembl:ENST00000460056
ArrayExpress:E9PCA3 Bgee:E9PCA3 Uniprot:E9PCA3
Length = 676
Score = 186 (70.5 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 76/313 (24%), Positives = 127/313 (40%)
Query: 83 IPIGGFEPQEKLVELQLNHNKHFPQQIVC--SIISPRRVEIFGQNRISRIDQACFEGLTA 140
+P F+ L +L L +NK I + S ++ + NRI+ + FE L
Sbjct: 60 LPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYL-SHNRITFLKPGVFEDLHR 118
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF-NGLGRLSALDLRGAGL 199
L L ++DN L + P+F L L L + NV T L D + RL LDL G +
Sbjct: 119 LEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHI 178
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
N+ + F S L LV+ N++ + + L +L+EL++G N L FK L
Sbjct: 179 HNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLK 238
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L +L ++ + + +++ F D I++ L NL H+ K+
Sbjct: 239 ELSQLNLS-YNPIQKIQANQF-DYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHIYFKKF 296
Query: 320 AFTSFSESMLAW-PELRTIDIAENPIECGCN--ILWLREMLVRRNTSAVFCNSPAPLKYK 376
+ ++ + + P I EN + +W+ + V C P
Sbjct: 297 QYCGYAPHVRSCKPNTDGISSLENLLASIIQRVFVWVVSAVTCFGNIFVICMRPYIRSEN 356
Query: 377 SLISLSAEDLGCA 389
L ++S L CA
Sbjct: 357 KLYAMSIISLCCA 369
Score = 178 (67.7 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 66/251 (26%), Positives = 111/251 (44%)
Query: 33 EANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ 91
E NL +PS S+ ++ + L N I+ + Y LQ + L + I I F
Sbjct: 34 ETNLRAVPSVSS-NVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGL 92
Query: 92 EKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQ 150
L +L L+HN+ F + V + I N +SRI F GL +L +L L +N
Sbjct: 93 NSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNV 152
Query: 151 LRSVPT-PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
L +P P ++ L L + N L + F L+ L +R + ++++N F
Sbjct: 153 LTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAP 212
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L L L L N+++++P L L +L + N ++A F L LK L + G
Sbjct: 213 LQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGI 272
Query: 270 SNLTRVRKGAF 280
++ +++ F
Sbjct: 273 E-ISNIQQRMF 282
Score = 150 (57.9 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/158 (31%), Positives = 74/158 (46%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I ++ CF+ L+ LYL +N++ S+ +F L L +L + N T L G F
Sbjct: 55 NLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFE 114
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK-LTRLEELEIG 243
L RL L + L+ IS F GL+ L LVL +N L +P K L + + RL L++
Sbjct: 115 DLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLE 174
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
N L F S L L + + + + + FA
Sbjct: 175 GNHIHNLRNLTFISCSNLTVL-VMRKNKINHLNENTFA 211
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 55/222 (24%), Positives = 93/222 (41%)
Query: 47 IQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQL--NHNK 103
+Q+L L N+I ++ A SL + LSH + G FE +L L + NH
Sbjct: 71 LQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLS 130
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRI-DQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ S + + N ++R+ D+ + + L L L+ N + ++ +FI
Sbjct: 131 RISPPTFYGLNSLILLVLMN-NVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISC 189
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N L + F L +L LDL + N+ F+ L L L L+ N
Sbjct: 190 SNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNP 249
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+Q I Q L +L+ L + S ++ F+ L L +
Sbjct: 250 IQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 291
>UNIPROTKB|Q9HBX9 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007188
"adenylate cyclase-modulating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007567 "parturition" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0042562
"hormone binding" evidence=IEA] [GO:0060427 "lung connective tissue
development" evidence=IEA] [GO:0060658 "nipple morphogenesis"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0030154 GO:GO:0046872
GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 EMBL:CH471056
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 EMBL:AF190500 EMBL:AY899848 EMBL:AY899849
EMBL:AY899850 EMBL:AK300379 EMBL:BC112142 EMBL:BC113617
IPI:IPI00012456 IPI:IPI00219888 IPI:IPI00654878 IPI:IPI00876893
RefSeq:NP_001240657.1 RefSeq:NP_001240658.1 RefSeq:NP_067647.2
UniGene:Hs.591686 PDB:2JM4 PDBsum:2JM4 ProteinModelPortal:Q9HBX9
SMR:Q9HBX9 MINT:MINT-231156 STRING:Q9HBX9 PhosphoSite:Q9HBX9
DMDM:166209887 PRIDE:Q9HBX9 DNASU:59350 Ensembl:ENST00000307765
Ensembl:ENST00000343542 Ensembl:ENST00000423548
Ensembl:ENST00000470033 Ensembl:ENST00000471616 GeneID:59350
KEGG:hsa:59350 UCSC:uc003ipz.3 UCSC:uc010iqm.3 UCSC:uc010iqo.3
CTD:59350 GeneCards:GC04P159236 H-InvDB:HIX0024561 HGNC:HGNC:19718
HPA:HPA027067 MIM:606654 neXtProt:NX_Q9HBX9 PharmGKB:PA134868312
HOVERGEN:HBG026354 InParanoid:Q9HBX9 KO:K04306 OMA:YTLTTRP
PhylomeDB:Q9HBX9 ChEMBL:CHEMBL1293316 EvolutionaryTrace:Q9HBX9
GenomeRNAi:59350 NextBio:65261 ArrayExpress:Q9HBX9 Bgee:Q9HBX9
CleanEx:HS_RXFP1 Genevestigator:Q9HBX9 GermOnline:ENSG00000171509
GO:GO:0060658 Uniprot:Q9HBX9
Length = 757
Score = 186 (70.5 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 76/313 (24%), Positives = 127/313 (40%)
Query: 83 IPIGGFEPQEKLVELQLNHNKHFPQQIVC--SIISPRRVEIFGQNRISRIDQACFEGLTA 140
+P F+ L +L L +NK I + S ++ + NRI+ + FE L
Sbjct: 141 LPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYL-SHNRITFLKPGVFEDLHR 199
Query: 141 LRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF-NGLGRLSALDLRGAGL 199
L L ++DN L + P+F L L L + NV T L D + RL LDL G +
Sbjct: 200 LEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHI 259
Query: 200 TNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLS 259
N+ + F S L LV+ N++ + + L +L+EL++G N L FK L
Sbjct: 260 HNLRNLTFISCSNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLK 319
Query: 260 YLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L +L ++ + + +++ F D I++ L NL H+ K+
Sbjct: 320 ELSQLNLS-YNPIQKIQANQF-DYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHIYFKKF 377
Query: 320 AFTSFSESMLAW-PELRTIDIAENPIECGCN--ILWLREMLVRRNTSAVFCNSPAPLKYK 376
+ ++ + + P I EN + +W+ + V C P
Sbjct: 378 QYCGYAPHVRSCKPNTDGISSLENLLASIIQRVFVWVVSAVTCFGNIFVICMRPYIRSEN 437
Query: 377 SLISLSAEDLGCA 389
L ++S L CA
Sbjct: 438 KLYAMSIISLCCA 450
Score = 178 (67.7 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 66/251 (26%), Positives = 111/251 (44%)
Query: 33 EANLDVIPSHSNPSIQRLVLSTNRIKTVD-SAIPIYLSLQHVDLSHTTWLIIPIGGFEPQ 91
E NL +PS S+ ++ + L N I+ + Y LQ + L + I I F
Sbjct: 115 ETNLRAVPSVSS-NVTAMSLQWNLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGL 173
Query: 92 EKLVELQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQ 150
L +L L+HN+ F + V + I N +SRI F GL +L +L L +N
Sbjct: 174 NSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNV 233
Query: 151 LRSVPT-PSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRG 209
L +P P ++ L L + N L + F L+ L +R + ++++N F
Sbjct: 234 LTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAP 293
Query: 210 LSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGA 269
L L L L N+++++P L L +L + N ++A F L LK L + G
Sbjct: 294 LQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLEGI 353
Query: 270 SNLTRVRKGAF 280
++ +++ F
Sbjct: 354 E-ISNIQQRMF 363
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 49/158 (31%), Positives = 74/158 (46%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N I ++ CF+ L+ LYL +N++ S+ +F L L +L + N T L G F
Sbjct: 136 NLIRKLPPDCFKNYHDLQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFE 195
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSK-LTRLEELEIG 243
L RL L + L+ IS F GL+ L LVL +N L +P K L + + RL L++
Sbjct: 196 DLHRLEWLIIEDNHLSRISPPTFYGLNSLILLVLMNNVLTRLPDKPLCQHMPRLHWLDLE 255
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
N L F S L L + + + + + FA
Sbjct: 256 GNHIHNLRNLTFISCSNLTVL-VMRKNKINHLNENTFA 292
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 55/222 (24%), Positives = 93/222 (41%)
Query: 47 IQRLVLSTNRIKTVDS-AIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQL--NHNK 103
+Q+L L N+I ++ A SL + LSH + G FE +L L + NH
Sbjct: 152 LQKLYLQNNKITSISIYAFRGLNSLTKLYLSHNRITFLKPGVFEDLHRLEWLIIEDNHLS 211
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRI-DQACFEGLTALRILYLDDNQLRSVPTPSFIYL 162
+ S + + N ++R+ D+ + + L L L+ N + ++ +FI
Sbjct: 212 RISPPTFYGLNSLILLVLMN-NVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISC 270
Query: 163 GMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNR 222
L L + N L + F L +L LDL + N+ F+ L L L L+ N
Sbjct: 271 SNLTVLVMRKNKINHLNENTFAPLQKLDELDLGSNKIENLPPLIFKDLKELSQLNLSYNP 330
Query: 223 LQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRL 264
+Q I Q L +L+ L + S ++ F+ L L +
Sbjct: 331 IQKIQANQFDYLVKLKSLSLEGIEISNIQQRMFRPLMNLSHI 372
>RGD|1359464 [details] [associations]
symbol:Lrg1 "leucine-rich alpha-2-glycoprotein 1" species:10116
"Rattus norvegicus" [GO:0005615 "extracellular space" evidence=ISO]
[GO:0050873 "brown fat cell differentiation" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 RGD:1359464
CTD:116844 HOVERGEN:HBG000045 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 EMBL:BC088434 IPI:IPI00393521
RefSeq:NP_001009717.1 UniGene:Rn.17847 ProteinModelPortal:Q5I0E1
GeneID:367455 KEGG:rno:367455 NextBio:691280 Genevestigator:Q5I0E1
Uniprot:Q5I0E1
Length = 332
Score = 179 (68.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 81/337 (24%), Positives = 144/337 (42%)
Query: 69 SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK----HFPQQIVCSIISPRRVEIFGQ 124
S QH T +L+ +GG + + LQ H P + S+ + V + +
Sbjct: 3 SWQHQ--GRTLFLLALLGGVSGLRECLILQSVKGSTVSCHGPTEFPSSLPADT-VHLSVE 59
Query: 125 -NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
+ ++++ A +G L+ L+L N+L+ + + L L + N +L G F
Sbjct: 60 FSSLTQLPAAALQGCPGLQELHLSSNRLQELSPGLLAPVPRLRVLDLTRNALRSLPPGLF 119
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIG 243
L+ L LR L S +GL L L L +NRL+S+P + L+ L L L++G
Sbjct: 120 RSSAALNTLVLRENQLQEASARWLQGLDALGYLDLAENRLRSLPARLLANLGALHTLDLG 179
Query: 244 QNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEG 303
N L G +G L+RL + G + L R+ G A +
Sbjct: 180 HNLLESLPEGFLRGPRRLQRLHLEG-NRLQRLEAGLLAPQPFLGVLFLNDNQLTA-VAAD 237
Query: 304 ALVGLPNLYHLNLKENAFTSFSESMLAW---P--ELRT-IDIAENPIECGCNIL----WL 353
+ GL L L+L N+ +S + A+ P +++ D++ NP C +++ WL
Sbjct: 238 SFRGLKQLDMLDLSNNSLSSTPPGLWAFLGRPTRDMQDGFDVSHNPWVCDKDLVDLCRWL 297
Query: 354 ---REMLVRRNTSAVFCNSPAPLKYKSLISLSAEDLG 387
R + +N + C P ++ + L+ ++ +LG
Sbjct: 298 AANRHKMFSQNDT--LCAGPEAVRGQRLLDVA--ELG 330
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 56/237 (23%), Positives = 95/237 (40%)
Query: 353 LREMLVRRNT--SAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSL 410
LRE L+ ++ S V C+ P ++ S + L + LT + A +G GL+ L
Sbjct: 23 LRECLILQSVKGSTVSCHGPT--EFPSSLPADTVHLSVEFSSLTQLPAAALQGCPGLQEL 80
Query: 411 VLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVR 470
L+ NRLQ + L+ + RL L++ +N L G F+ + L L + N +
Sbjct: 81 HLSSNRLQELSPGLLAPVPRLRVLDLTRNALRSLPPGLFRSSAALNTLVLR--ENQLQEA 138
Query: 471 KGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPE-LR 529
+ + L L L+ L+L N S E L P L+
Sbjct: 139 SARWLQGLDALGYLDLAENRLRSLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQ 198
Query: 530 TIDIAENPIE-CGCNIL----WLREMLVRRNT-SAVFCNSPAPLKYKSLISLSAEDL 580
+ + N ++ +L +L + + N +AV +S LK ++ LS L
Sbjct: 199 RLHLEGNRLQRLEAGLLAPQPFLGVLFLNDNQLTAVAADSFRGLKQLDMLDLSNNSL 255
Score = 119 (46.9 bits), Expect = 0.00036, P = 0.00036
Identities = 57/223 (25%), Positives = 94/223 (42%)
Query: 13 CMNPYE-PSRFSTRDPSCNLQEANLDVIPS---HSNPSIQRLVLSTNRIKTVDSAI--PI 66
C P E PS +++ ++L +P+ P +Q L LS+NR++ + + P+
Sbjct: 39 CHGPTEFPSSLPADTVHLSVEFSSLTQLPAAALQGCPGLQELHLSSNRLQELSPGLLAPV 98
Query: 67 YLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK--HFPQQIVCSIISPRRVEIFGQ 124
L+ +DL+ +P G F L L L N+ + + + + +++ +
Sbjct: 99 P-RLRVLDLTRNALRSLPPGLFRSSAALNTLVLRENQLQEASARWLQGLDALGYLDL-AE 156
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
NR+ + L AL L L N L S+P L L + N L G
Sbjct: 157 NRLRSLPARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGNRLQRLEAGLLA 216
Query: 185 GLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIP 227
L L L LT ++ ++FRGL L L L++N L S P
Sbjct: 217 PQPFLGVLFLNDNQLTAVAADSFRGLKQLDMLDLSNNSLSSTP 259
>RGD|735138 [details] [associations]
symbol:Tlr2 "toll-like receptor 2" species:10116 "Rattus
norvegicus" [GO:0001666 "response to hypoxia" evidence=IEP]
[GO:0002224 "toll-like receptor signaling pathway"
evidence=IMP;IDA] [GO:0002238 "response to molecule of fungal
origin" evidence=ISO] [GO:0002282 "microglial cell activation
involved in immune response" evidence=IDA] [GO:0002687 "positive
regulation of leukocyte migration" evidence=ISO] [GO:0002752 "cell
surface pattern recognition receptor signaling pathway"
evidence=ISO] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006691 "leukotriene metabolic process"
evidence=IDA] [GO:0006954 "inflammatory response" evidence=IDA]
[GO:0006955 "immune response" evidence=NAS] [GO:0007252 "I-kappaB
phosphorylation" evidence=ISO] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:0008329 "pattern recognition
receptor activity" evidence=ISO] [GO:0009617 "response to
bacterium" evidence=ISO] [GO:0009636 "response to toxic substance"
evidence=IEP] [GO:0009897 "external side of plasma membrane"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO;IDA]
[GO:0030177 "positive regulation of Wnt receptor signaling pathway"
evidence=ISO] [GO:0032289 "central nervous system myelin formation"
evidence=IDA] [GO:0032493 "response to bacterial lipoprotein"
evidence=IDA] [GO:0032494 "response to peptidoglycan" evidence=ISO]
[GO:0032496 "response to lipopolysaccharide" evidence=IEP]
[GO:0032570 "response to progesterone stimulus" evidence=IEP]
[GO:0032695 "negative regulation of interleukin-12 production"
evidence=ISO] [GO:0032700 "negative regulation of interleukin-17
production" evidence=ISO] [GO:0032722 "positive regulation of
chemokine production" evidence=ISO] [GO:0032728 "positive
regulation of interferon-beta production" evidence=ISO] [GO:0032733
"positive regulation of interleukin-10 production" evidence=IDA]
[GO:0032735 "positive regulation of interleukin-12 production"
evidence=ISO] [GO:0032741 "positive regulation of interleukin-18
production" evidence=ISO] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=ISO] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=ISO] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=ISO] [GO:0032868 "response to insulin stimulus"
evidence=IEP] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=ISO] [GO:0035354 "Toll-like
receptor 1-Toll-like receptor 2 protein complex" evidence=ISO]
[GO:0035355 "Toll-like receptor 2-Toll-like receptor 6 protein
complex" evidence=ISO] [GO:0042346 "positive regulation of
NF-kappaB import into nucleus" evidence=ISO] [GO:0042495 "detection
of triacyl bacterial lipopeptide" evidence=ISO] [GO:0042496
"detection of diacyl bacterial lipopeptide" evidence=ISO]
[GO:0042497 "triacyl lipopeptide binding" evidence=ISO] [GO:0042498
"diacyl lipopeptide binding" evidence=ISO] [GO:0042535 "positive
regulation of tumor necrosis factor biosynthetic process"
evidence=ISO] [GO:0042742 "defense response to bacterium"
evidence=IDA] [GO:0042834 "peptidoglycan binding" evidence=ISO]
[GO:0042892 "chloramphenicol transport" evidence=ISO] [GO:0042995
"cell projection" evidence=IDA] [GO:0044130 "negative regulation of
growth of symbiont in host" evidence=ISO] [GO:0044297 "cell body"
evidence=IDA] [GO:0045429 "positive regulation of nitric oxide
biosynthetic process" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046209 "nitric oxide metabolic process"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IDA] [GO:0050715 "positive regulation of
cytokine secretion" evidence=ISO] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=ISO] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0051637 "Gram-positive bacterial cell surface
binding" evidence=ISO] [GO:0051770 "positive regulation of
nitric-oxide synthase biosynthetic process" evidence=ISO]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=IDA]
[GO:0052063 "induction by symbiont of defense-related host nitric
oxide production" evidence=ISO] [GO:0060907 "positive regulation of
macrophage cytokine production" evidence=ISO] [GO:0070542 "response
to fatty acid" evidence=IDA] [GO:0070891 "lipoteichoic acid
binding" evidence=ISO] [GO:0071221 "cellular response to bacterial
lipopeptide" evidence=ISO] [GO:0071223 "cellular response to
lipoteichoic acid" evidence=ISO] [GO:0071224 "cellular response to
peptidoglycan" evidence=ISO] [GO:0071723 "lipopeptide binding"
evidence=IMP] [GO:0071726 "cellular response to diacyl bacterial
lipopeptide" evidence=ISO] [GO:0071727 "cellular response to
triacyl bacterial lipopeptide" evidence=ISO] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR017241 InterPro:IPR027185
Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:735138 GO:GO:0016021 GO:GO:0070542 GO:GO:0009636
GO:GO:0042742 GO:GO:0032496 GO:GO:0006954 GO:GO:0001666
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0004872 GO:GO:0005622 GO:GO:0032868
GO:GO:0032570 GO:GO:0004888 GO:GO:0002224 GO:GO:0052033
GO:GO:0046209 GO:GO:0071723 GO:GO:0002282 EMBL:CH473976
SUPFAM:SSF52200 eggNOG:NOG251801 HOGENOM:HOG000110611
HOVERGEN:HBG108574 KO:K10159 OrthoDB:EOG4SN1N6
PANTHER:PTHR24365:SF17 CTD:7097 GO:GO:0032493 IPI:IPI00400619
EMBL:AY151255 EMBL:AY151256 RefSeq:NP_942064.1 UniGene:Rn.46387
SMR:Q6YGU2 STRING:Q6YGU2 GeneID:310553 KEGG:rno:310553
UCSC:RGD:735138 InParanoid:Q6YGU2 NextBio:662149
Genevestigator:Q6YGU2 Uniprot:Q6YGU2
Length = 784
Score = 133 (51.9 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 46/181 (25%), Positives = 78/181 (43%)
Query: 167 ELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI 226
+L + N T + G L L L +G+ I +AF L L L L++N L S+
Sbjct: 56 KLDLSFNKITYIGHGDLRACVNLRVLTLESSGINTIEGDAFYSLGSLEHLDLSNNHLSSL 115
Query: 227 PTKQLSKLTRLEELEIGQNGFSML-EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXX 285
+ L+ L+ L + N + L E F L+ L+ L + + +R+ FA
Sbjct: 116 SSSWFRPLSSLKYLNLMGNPYRTLGETSLFSNLTNLQTLRVGNVDTFSEIRRIDFAGLTS 175
Query: 286 XXXXXXXXXXXXXXIEEGALVGLPNLYHL--NLKENAFTS--FSE--SMLAWPELRTIDI 339
E +L + ++YHL +L E+AF F++ S + + ELR ++
Sbjct: 176 LNELEIQVLSLGNY-ESRSLQSIRDIYHLTLHLSESAFLLGIFADILSSVRYLELRDTNL 234
Query: 340 A 340
A
Sbjct: 235 A 235
Score = 107 (42.7 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 54/208 (25%), Positives = 84/208 (40%)
Query: 209 GLSGLRSLVLTDNRLQSI-PTKQ-LSKLTRLEELEIGQNGFSMLEAGC-FKGLSYLKRLE 265
G L+SLVL+ N L+SI T + L L L L+I +N F + C + G L
Sbjct: 385 GWPSLQSLVLSQNHLRSIRKTAEILLTLKNLTALDISKNSFQPMPDSCQWPGKMRFLNLS 444
Query: 266 ITGASNL-TRVRKGA----FADXXXXXXXXXXXXXXXXXIEEGALVGLPN------LYHL 314
TG + T + + ++ I L LP L +
Sbjct: 445 STGIQAVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPEASLFPVLQVM 504
Query: 315 NLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWL---REMLVRRNTS---AVFC 367
++ENA ++FS+ L ++P+L T++ +N C C +L R LV + C
Sbjct: 505 KIRENAISTFSKDQLGSFPKLETLEAGDNHFICSCELLSFILERPALVHVLVDWPDSYLC 564
Query: 368 NSPAPLKYKSLISLSAEDLGCAGAGLTN 395
+SP L + L L C A L +
Sbjct: 565 DSPPRLHGQRLQDARPSVLECHQAALVS 592
Score = 103 (41.3 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 42/158 (26%), Positives = 69/158 (43%)
Query: 403 GLSGLRSLVLTDNRLQSI-PTKQ-LSKLTRLEELEIGQNGFSMLEAGC-FKGLSYLKRLE 459
G L+SLVL+ N L+SI T + L L L L+I +N F + C + G L
Sbjct: 385 GWPSLQSLVLSQNHLRSIRKTAEILLTLKNLTALDISKNSFQPMPDSCQWPGKMRFLNLS 444
Query: 460 ITGASNL-TRVRKGA----FADXXXXXXXXXXXXXXXXIIEEDALVGLPN------LYHL 508
TG + T + + ++ I + L LP L +
Sbjct: 445 STGIQAVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPEASLFPVLQVM 504
Query: 509 NLKENAFTSFSESML-AWPELRTIDIAENPIECGCNIL 545
++ENA ++FS+ L ++P+L T++ +N C C +L
Sbjct: 505 KIRENAISTFSKDQLGSFPKLETLEAGDNHFICSCELL 542
Score = 100 (40.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/120 (26%), Positives = 56/120 (46%)
Query: 125 NRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFN 184
N+I+ I LR+L L+ + + ++ +F LG L L + N ++L+ F
Sbjct: 62 NKITYIGHGDLRACVNLRVLTLESSGINTIEGDAFYSLGSLEHLDLSNNHLSSLSSSWFR 121
Query: 185 GLGRLSALDLRGAGLTNISDNA-FRGLSGLRSLVLTD-NRLQSIPTKQLSKLTRLEELEI 242
L L L+L G + + + F L+ L++L + + + I + LT L ELEI
Sbjct: 122 PLSSLKYLNLMGNPYRTLGETSLFSNLTNLQTLRVGNVDTFSEIRRIDFAGLTSLNELEI 181
Score = 91 (37.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 45/194 (23%), Positives = 75/194 (38%)
Query: 175 FTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKL 234
FT++ G LDL +T I R LR L L + + +I L
Sbjct: 43 FTSIPSGL---TANTKKLDLSFNKITYIGHGDLRACVNLRVLTLESSGINTIEGDAFYSL 99
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXX 294
LE L++ N S L + F+ LS LK L + G T F++
Sbjct: 100 GSLEHLDLSNNHLSSLSSSWFRPLSSLKYLNLMGNPYRTLGETSLFSNLTNLQTLRVGNV 159
Query: 295 XXXXXIEEGALVGLPNLYHLNLKENAFTSF-SESMLAWPELR--TIDIAENPIECG--CN 349
I GL +L L ++ + ++ S S+ + ++ T+ ++E+ G +
Sbjct: 160 DTFSEIRRIDFAGLTSLNELEIQVLSLGNYESRSLQSIRDIYHLTLHLSESAFLLGIFAD 219
Query: 350 ILWLREMLVRRNTS 363
IL L R+T+
Sbjct: 220 ILSSVRYLELRDTN 233
Score = 73 (30.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 51/213 (23%), Positives = 94/213 (44%)
Query: 46 SIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH 104
+++ L L ++ I T++ L SL+H+DLS+ + F P L L L N +
Sbjct: 77 NLRVLTLESSGINTIEGDAFYSLGSLEHLDLSNNHLSSLSSSWFRPLSSLKYLNLMGNPY 136
Query: 105 FP---QQIVCSIISPRRVEIFGQNRISRIDQACFEGLTAL-----RILYLDDNQLRSVPT 156
+ ++ + + + + + S I + F GLT+L ++L L + + RS+ +
Sbjct: 137 RTLGETSLFSNLTNLQTLRVGNVDTFSEIRRIDFAGLTSLNELEIQVLSLGNYESRSLQS 196
Query: 157 PSFIY-LGM-LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNI--SDNAFRGL-S 211
IY L + L+E L +F + L + L+LR L S+ + + S
Sbjct: 197 IRDIYHLTLHLSESAFLLGIFADI-------LSSVRYLELRDTNLARFQFSELSVDEINS 249
Query: 212 GLRSLVLTDNRLQSIPTKQLSKLTR--LEELEI 242
++ L + L +L KL R LE +E+
Sbjct: 250 PMKKLAFRNADLTDKSFNELLKLLRYILELMEV 282
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 513 NAFTSFSESMLAWPELRTIDIAEN 536
+AF S+SE W E + EN
Sbjct: 642 DAFVSYSEQDSYWVENLMVQQLEN 665
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 502 LPNLYHLNLKENAFTS--FSESML--AWPELRTIDIAEN 536
L +L L+L EN S WP L+++ +++N
Sbjct: 359 LKSLEFLDLSENLMVEEYLKNSACEGGWPSLQSLVLSQN 397
>FB|FBgn0000313 [details] [associations]
symbol:chp "chaoptic" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS;IDA] [GO:0007156
"homophilic cell adhesion" evidence=NAS;IDA] [GO:0042051 "compound
eye photoreceptor development" evidence=NAS] [GO:0042052
"rhabdomere development" evidence=IGI] [GO:0016028 "rhabdomere"
evidence=IDA] Pfam:PF00560 InterPro:IPR000225 InterPro:IPR001611
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005886 GO:GO:0007601
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050896
GO:GO:0007156 GO:GO:0016028 HOGENOM:HOG000265621 GO:GO:0042052
GeneTree:ENSGT00700000104056 EMBL:M19017 EMBL:M19008 EMBL:M19009
EMBL:M19010 EMBL:M19011 EMBL:M19012 EMBL:M19013 EMBL:M19014
EMBL:M19016 EMBL:K03274 PIR:A29944 RefSeq:NP_524605.1
UniGene:Dm.21698 ProteinModelPortal:P12024 SMR:P12024 STRING:P12024
PaxDb:P12024 PRIDE:P12024 EnsemblMetazoa:FBtr0085778
EnsemblMetazoa:FBtr0330099 GeneID:43690 KEGG:dme:Dmel_CG1744
CTD:64152 FlyBase:FBgn0000313 InParanoid:P12024 OMA:LSHNDEL
OrthoDB:EOG4VQ844 PhylomeDB:P12024 ChiTaRS:CHP GenomeRNAi:43690
NextBio:835267 Bgee:P12024 GermOnline:CG1744 Uniprot:P12024
Length = 1315
Score = 140 (54.3 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 45/156 (28%), Positives = 70/156 (44%)
Query: 192 LDLRGAGLTNISDNAFRGLS-GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
L + G LT I D+AF GL L L+L N L IP+K L L +L L++G N + +
Sbjct: 107 LKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITHI 166
Query: 251 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALV-GLP 309
+ F+GL + I + ++++ +F+ I+ V G+P
Sbjct: 167 QHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFE-IDPNVFVDGMP 225
Query: 310 NLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPI 344
L L L +N + L LRT+DI+ N I
Sbjct: 226 RLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVI 261
Score = 140 (54.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 44/155 (28%), Positives = 69/155 (44%)
Query: 386 LGCAGAGLTNISDNAFRGLS-GLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 444
L +G LT I D+AF GL L L+L N L IP+K L L +L L++G N + +
Sbjct: 107 LKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITHI 166
Query: 445 EAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEEDALVGLPN 504
+ F+GL + I + ++++ +F+ I + G+P
Sbjct: 167 QHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPR 226
Query: 505 LYHLNLKENAFTSFSESMLA-WPELRTIDIAENPI 538
L L L +N + L LRT+DI+ N I
Sbjct: 227 LTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVI 261
Score = 136 (52.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 53/212 (25%), Positives = 88/212 (41%)
Query: 70 LQHVDLSHTTWLIIPIGGF-EPQEKLVELQLNHN---KHFPQQIVCSIISPRRVEIFGQN 125
L+ +D S I F E L+ L+++H P + + + S + ++ F N
Sbjct: 478 LKRLDFSENGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELD-FSNN 536
Query: 126 RISRIDQACFEGLTALRILYLDDNQLRSVPTPSF---IYLGMLAELRVGLNVFTTLADGA 182
IS + F L LR+L L DN++ V +F I+ L E+ + N T+++
Sbjct: 537 HISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIH-SKLEEISLRFNHLTSISQHT 595
Query: 183 FNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 242
F L L L L + I AF L L L L N++ ++ + L +LE L++
Sbjct: 596 FFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDM 655
Query: 243 GQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
N F + L L + + N R
Sbjct: 656 AFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIR 687
Score = 136 (52.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 79/315 (25%), Positives = 125/315 (39%)
Query: 42 HSNPSIQRLVLSTNRIKTVDSAI--PIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQL 99
HSN I+ L LS N I + P +SL H+ L + + + F L L L
Sbjct: 706 HSN--IKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDL 763
Query: 100 NHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 158
++N H ++ FG N +S I Q F+ + LRI+ N LR +P
Sbjct: 764 SYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNL 823
Query: 159 FIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAG--LTNISD----NAFRGLSG 212
F Y G + +L V N+ + + + L L+ +L + ++ I N FR L
Sbjct: 824 F-YNGGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSL-- 880
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGL--SYLKR-LEITGA 269
R L ++ N L I + + +L L++ N + F GL S +K LE
Sbjct: 881 -RYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENISL 939
Query: 270 SNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESML 329
S + +R + I + + NL L+L N T+
Sbjct: 940 STVPEIRLKYLREFRLGYNELPS-------IPQELAHNMSNLRMLDLSNNDLTNVPLMTQ 992
Query: 330 AWPELRTIDIAENPI 344
A P LR + ++ NPI
Sbjct: 993 ALPHLRRLMLSGNPI 1007
Score = 134 (52.2 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 52/185 (28%), Positives = 78/185 (42%)
Query: 143 ILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGR-LSALDLRGAGLTN 201
+L++++ LR + P F+ + L++ N T + D AF GL R L L L L
Sbjct: 83 MLHMENTGLREIE-PYFLQSTGMYRLKISGNHLTEIPDDAFTGLERSLWELILPQNDLVE 141
Query: 202 ISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLT-RLEELEIGQNGFSMLEAGCFKGLSY 260
I + R L LR L L N + I L L+ L + +N S L + F GL
Sbjct: 142 IPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLI 201
Query: 261 LKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENA 320
L+ L+++G +NL + F D I AL L +L L++ N
Sbjct: 202 LETLDLSG-NNLFEIDPNVFVDGMPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNV 260
Query: 321 FTSFS 325
S S
Sbjct: 261 IWSLS 265
Score = 130 (50.8 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 47/153 (30%), Positives = 72/153 (47%)
Query: 118 RVEIFGQNRISRIDQACFEGLT-ALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFT 176
R++I G N ++ I F GL +L L L N L +P+ S +L L L +G N T
Sbjct: 106 RLKISG-NHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHIT 164
Query: 177 TLADGAFNGL-GRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSI-PTKQLSKL 234
+ +F GL L L LR ++ + ++F GL L +L L+ N L I P + +
Sbjct: 165 HIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDGM 224
Query: 235 TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEIT 267
RL L + N S + L L+ L+I+
Sbjct: 225 PRLTRLLLTDNILSEIPYDALGPLKSLRTLDIS 257
Score = 108 (43.1 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 45/164 (27%), Positives = 70/164 (42%)
Query: 377 SLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEI 436
SLISL G +G+ L R L+ L+ L ++N + S+ L L LE+
Sbjct: 502 SLISLKMSH-GYSGSALPA---EPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLEL 557
Query: 437 GQNGFSMLEAGCFKGLSYLKRLEITGASN-LTRVRKGAFADXXXXXXXXXXXXXXXXIIE 495
N + G F+G + K EI+ N LT + + F D I E
Sbjct: 558 HDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKI-E 616
Query: 496 EDALVGLPNLYHLNLKENAFTSFS-ESMLAWPELRTIDIAENPI 538
A + L L +L+L+ N + + ES P+L +D+A N +
Sbjct: 617 RRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQL 660
Score = 91 (37.1 bits), Expect = 8.4e-06, Sum P(3) = 8.4e-06
Identities = 51/219 (23%), Positives = 80/219 (36%)
Query: 49 RLVLSTNRIKTV--DSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQL--NHNKH 104
RL +S N + + D+ + SL + L + IP +KL L L NH H
Sbjct: 106 RLKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITH 165
Query: 105 FPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGM 164
+ + I +N IS++ F GL L L L N L + P+ GM
Sbjct: 166 IQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEID-PNVFVDGM 224
Query: 165 --LAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSG-----LRSLV 217
L L + N+ + + A L L LD+ + ++S N + L +L
Sbjct: 225 PRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLH 284
Query: 218 LTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFK 256
L N ++ +P + N L FK
Sbjct: 285 LEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAFK 323
Score = 79 (32.9 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 29/139 (20%), Positives = 61/139 (43%)
Query: 404 LSGLRSLVLTDNRLQSIPTKQLSKL-TRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITG 462
+ +RSL ++ S+ + LE+L+I + S +++ FK + LKRL+ +
Sbjct: 426 MRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDFS- 484
Query: 463 ASNLTRVRKGAFADXXXXXXXXXXXXXXX-XIIEEDALVGLPNLYHLNLKENAFTSFSES 521
+ ++ + AF + + + L L +L L+ N +S S++
Sbjct: 485 ENGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDT 544
Query: 522 MLAW-PELRTIDIAENPIE 539
+ LR +++ +N IE
Sbjct: 545 SFHFLKNLRLLELHDNRIE 563
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 502 LPNLYHLNLKENAFTSFSESMLAW--PELRTIDIAE---NPIECGC--NILWLREMLVRR 554
LP+L L L N TS + + +L +DI+ + E GC ++ LR + +
Sbjct: 994 LPHLRRLMLSGNPITSLNNNSFDGVNEDLEMLDISNFRLHYFEYGCLDSLPHLRSLKLTA 1053
Query: 555 NTSAVFCNSPAPLKY 569
+ N P L++
Sbjct: 1054 YSHLEHFNIPHLLRH 1068
Score = 38 (18.4 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 528 LRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNS 563
L + ++ + C C++ W+ E R+ + C+S
Sbjct: 1203 LTDLKMSHTDLNCDCDLGWV-EFWQRKRRQYI-CSS 1236
Score = 38 (18.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 334 LRTIDIAENPIECGCNILWLREMLVRRNTSAVFCNS 369
L + ++ + C C++ W+ E R+ + C+S
Sbjct: 1203 LTDLKMSHTDLNCDCDLGWV-EFWQRKRRQYI-CSS 1236
>UNIPROTKB|Q6EMK4 [details] [associations]
symbol:VASN "Vasorin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR003961
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
SMART:SM00181 GO:GO:0016021 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 EMBL:AY166584 EMBL:AY358298 EMBL:AY358299
EMBL:BC013767 EMBL:BC068575 IPI:IPI00395488 RefSeq:NP_612449.2
UniGene:Hs.372579 ProteinModelPortal:Q6EMK4 SMR:Q6EMK4
DIP:DIP-46245N STRING:Q6EMK4 PhosphoSite:Q6EMK4 DMDM:74748436
PaxDb:Q6EMK4 PeptideAtlas:Q6EMK4 PRIDE:Q6EMK4
Ensembl:ENST00000304735 GeneID:114990 KEGG:hsa:114990
UCSC:uc002cwj.1 CTD:114990 GeneCards:GC16P004421 HGNC:HGNC:18517
HPA:HPA011246 MIM:608843 neXtProt:NX_Q6EMK4 PharmGKB:PA134974883
eggNOG:NOG273568 HOGENOM:HOG000261606 HOVERGEN:HBG084318
InParanoid:Q6EMK4 OMA:VTQLRPN OrthoDB:EOG4GTKD4 PhylomeDB:Q6EMK4
GenomeRNAi:114990 NextBio:79480 Bgee:Q6EMK4 CleanEx:HS_VASN
Genevestigator:Q6EMK4 GermOnline:ENSG00000168140 Uniprot:Q6EMK4
Length = 673
Score = 185 (70.2 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 72/238 (30%), Positives = 105/238 (44%)
Query: 39 IPSHSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVEL 97
+P P L + N I +D+ L LQ +DLS +P G F+P L L
Sbjct: 46 VPRDVPPDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNL 105
Query: 98 QLNHNKHFPQQIVCSIISP-RRVE--IFGQNRISRIDQACFEGLTALRILYLDDNQLRSV 154
L N+ +I RR+E G+NRI I F+ L L L L DN+LR++
Sbjct: 106 DLTANRL--HEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRAL 163
Query: 155 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLR 214
P P + L L L + N L G + + AL L G GL + + F L L
Sbjct: 164 P-P--LRLPRLLLLDLSHNSLLALEPGILD-TANVEALRLAGLGLQQLDEGLFSRLRNLH 219
Query: 215 SLVLTDNRLQSIPT--KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
L ++DN+L+ +P + L LTRL G + L GL+ L+ L+++ S
Sbjct: 220 DLDVSDNQLERVPPVIRGLRGLTRLRLA--GNTRIAQLRPEDLAGLAALQELDVSNLS 275
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 73/282 (25%), Positives = 110/282 (39%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN+I+ + F+ L L L L N+L + +F L L L +G N + GAF
Sbjct: 85 QNQIASLPSGVFQPLANLSNLDLTANRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAF 144
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLR--SLVLTD---NRLQSIPTKQLSKLTRLE 238
+ L RL L+L+ + DN R L LR L+L D N L ++ L +E
Sbjct: 145 DTLDRL--LELK------LQDNELRALPPLRLPRLLLLDLSHNSLLALEPGILDT-ANVE 195
Query: 239 ELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXX 298
L + G L+ G F L L L+++ + L RV
Sbjct: 196 ALRLAGLGLQQLDEGLFSRLRNLHDLDVSD-NQLERVPP-VIRGLRGLTRLRLAGNTRIA 253
Query: 299 XIEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILW----L 353
+ L GL L L++ + + + +P LR + A NP C C + W +
Sbjct: 254 QLRPEDLAGLAALQELDVSNLSLQALPGDLSGLFPRLRLLAAARNPFNCVCPLSWFGPWV 313
Query: 354 REMLVR-RNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLT 394
RE V + C+ P + L+ L D GC T
Sbjct: 314 RESHVTLASPEETRCHFPPKNAGRLLLELDYADFGCPATTTT 355
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 51/169 (30%), Positives = 82/169 (48%)
Query: 114 ISPRRVEIFG-QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGL 172
+ P V ++ +N I+ +D F GL L++L L NQ+ S+P+ F L L+ L +
Sbjct: 50 VPPDTVGLYVFENGITMLDAGSFAGLPGLQLLDLSQNQIASLPSGVFQPLANLSNLDLTA 109
Query: 173 NVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 232
N + + F GL RL L L + +I AF L L L L DN L+++P
Sbjct: 110 NRLHEITNETFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPL--- 166
Query: 233 KLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFA 281
+L RL L++ N LE G + ++ L + G L ++ +G F+
Sbjct: 167 RLPRLLLLDLSHNSLLALEPGILDTAN-VEALRLAGLG-LQQLDEGLFS 213
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 53/228 (23%), Positives = 92/228 (40%)
Query: 240 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXX 299
L + +NG +ML+AG F GL L+ L+++ + + + G F
Sbjct: 57 LYVFENGITMLDAGSFAGLPGLQLLDLS-QNQIASLPSGVFQPLANLSNLDLTANRLHEI 115
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLV 358
E GL L L L +N L + + +N + + R +L+
Sbjct: 116 TNE-TFRGLRRLERLYLGKNRIRHIQPGAFDTLDRLLELKLQDNELRALPPLRLPRLLLL 174
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
+ +++ P L + + E L AG GL + + F L L L ++DN+L+
Sbjct: 175 DLSHNSLLALEPGILD-----TANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLE 229
Query: 419 SIPT--KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 464
+P + L LTRL G + L GL+ L+ L+++ S
Sbjct: 230 RVPPVIRGLRGLTRLRLA--GNTRIAQLRPEDLAGLAALQELDVSNLS 275
>UNIPROTKB|A4D1F6 [details] [associations]
symbol:LRRD1 "Leucine-rich repeat and death
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] Pfam:PF00560
InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:CH236949 Gene3D:1.10.533.10 InterPro:IPR011029
EMBL:AC000120 InterPro:IPR025875 Pfam:PF12799 EMBL:BC026112
EMBL:BC144674 EMBL:BC144678 IPI:IPI00887636 IPI:IPI00935774
RefSeq:NP_001155000.1 UniGene:Hs.671729 ProteinModelPortal:A4D1F6
SMR:A4D1F6 PhosphoSite:A4D1F6 PRIDE:A4D1F6 Ensembl:ENST00000343318
Ensembl:ENST00000430130 Ensembl:ENST00000458448 GeneID:401387
KEGG:hsa:401387 UCSC:uc011khp.1 CTD:401387 GeneCards:GC07M091743
HGNC:HGNC:34300 neXtProt:NX_A4D1F6 HOVERGEN:HBG108705
InParanoid:A4D1F6 OMA:CNKFETF OrthoDB:EOG4K6G5V GenomeRNAi:401387
NextBio:106780 ArrayExpress:A4D1F6 Bgee:A4D1F6
Genevestigator:A4D1F6 Uniprot:A4D1F6
Length = 860
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 97/452 (21%), Positives = 188/452 (41%)
Query: 37 DVIPSHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVE 96
D +PS +++ L L N++ T A+ L +DL+ +P + L
Sbjct: 274 DTLPSLK--TLRVLNLEYNQLTTFPKALCFLPKLISLDLTGNLISSLP-KEIRELKNLET 330
Query: 97 LQLNHNK-HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVP 155
L ++HNK F + ++ + +++ N++ I E LRIL LD N L+++P
Sbjct: 331 LLMDHNKLTFLAVEIFQLLKIKELQL-ADNKLEVISHK-IENFRELRILILDKNLLKNIP 388
Query: 156 TPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRS 215
ML L + N T L + L L L + + I+D L+ + S
Sbjct: 389 E-KISCCAMLECLSLSDNKLTELPK-YIHKLNNLRKLHVNRNNMVKITD-CISHLNNICS 445
Query: 216 LVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAG-C-FKGLSYLK---------RL 264
L + N + +P ++ ++ ++E+ N G C L YL +
Sbjct: 446 LEFSGNIITDVPI-EIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVNGNYISEIPV 504
Query: 265 EITGASNLTRVRKGA-----FADXXXXXXXXXXXXXXXXXIEE--GALVGLPNLYHLNLK 317
+I+ + L + F++ I++ ++ + +L+ L L
Sbjct: 505 DISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILC 564
Query: 318 ENAFTSFSESMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRNTSAVFCNSPAPL-KY 375
N F +F + L+ +D++EN ++ +I L+ + +S F + P L +
Sbjct: 565 CNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQL 624
Query: 376 KSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 435
+SL L+ + G LT + ++ L+ L +++N ++ IP + + +L L L
Sbjct: 625 QSLEQLNISQI--KGRKLTRLPGE-LSNMTQLKELDISNNAIREIP-RNIGELRNLVSLH 680
Query: 436 IGQNGFSMLEAGCFKGLSYLKRLEITGASNLT 467
N S L L+ L++L ++G +NLT
Sbjct: 681 AYNNQISYLPPSLLS-LNDLQQLNLSG-NNLT 710
Score = 124 (48.7 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 60/226 (26%), Positives = 98/226 (43%)
Query: 30 NLQEANLDVIPSH--SNPSIQRLVLSTNRIKTVDSAIP-IYLSLQHVDLSHTTWLIIPIG 86
NL+ L P ++ L L N+IKT A L L+ + L +P
Sbjct: 147 NLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLP-S 205
Query: 87 GFEPQEKLVELQLNHN--KHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRIL 144
+ L L ++HN H P++I S + R F N I E L L IL
Sbjct: 206 EIQLLHNLRILNVSHNHISHIPKEI--SQLGNIRQLFFYNNYIENFPSD-LECLGNLEIL 262
Query: 145 YLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISD 204
L N+LR +P + L L L + N TT A L +L +LDL G ++++
Sbjct: 263 SLGKNKLRHIPD-TLPSLKTLRVLNLEYNQLTTFPK-ALCFLPKLISLDLTGNLISSLPK 320
Query: 205 NAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML 250
R L L +L++ N+L + ++ +L +++EL++ N ++
Sbjct: 321 E-IRELKNLETLLMDHNKLTFLAV-EIFQLLKIKELQLADNKLEVI 364
Score = 122 (48.0 bits), Expect = 0.00069, P = 0.00069
Identities = 76/308 (24%), Positives = 125/308 (40%)
Query: 41 SHSNPSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLN 100
SH N +I L S N I V I + ++LS+ + P+G + L L +N
Sbjct: 438 SHLN-NICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFPLG-LCALDSLYYLSVN 495
Query: 101 HNKHFPQQIVCSI-ISPRRVEI-FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPS 158
N + +I I S + + + +N++ + F L L+ L L NQ++ +P S
Sbjct: 496 GN--YISEIPVDISFSKQLLHLELSENKLLIFSEH-FCSLINLKYLDLGKNQIKKIPA-S 551
Query: 159 FIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVL 218
+ L L + N F T L L LDL L IS + L G++ L
Sbjct: 552 ISNMISLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKISSDICN-LKGIQKLNF 609
Query: 219 TDNRLQSIPTKQLSKLTRLEELEIGQ-NGFSMLEA-GCFKGLSYLKRLEITGASNLTRVR 276
+ N+ P +L +L LE+L I Q G + G ++ LK L+I+ +N R
Sbjct: 610 SSNQFIHFPI-ELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDIS--NNAIREI 666
Query: 277 KGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRT 336
+ +L+ L +L LNL N T+ ++ L+
Sbjct: 667 PRNIGELRNLVSLHAYNNQISYL--PPSLLSLNDLQQLNLSGNNLTALPSAIYNIFSLKE 724
Query: 337 IDIAENPI 344
I+ +NP+
Sbjct: 725 INFDDNPL 732
Score = 113 (44.8 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 54/234 (23%), Positives = 95/234 (40%)
Query: 311 LYHLNLKENAFTSFSESMLAWPELRTIDIAENPIE----CGCNILWLREMLVRRNTSAVF 366
L HL L EN FSE + L+ +D+ +N I+ N++ L +++ N F
Sbjct: 512 LLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETF 571
Query: 367 CNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLS 426
L+ ++ LS L + + N L G++ L + N+ P +L
Sbjct: 572 PRELCTLENLQVLDLSENQLQKISSDICN--------LKGIQKLNFSSNQFIHFPI-ELC 622
Query: 427 KLTRLEELEIGQ-NGFSMLEA-GCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXX 484
+L LE+L I Q G + G ++ LK L+I+ +N R +
Sbjct: 623 QLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDIS--NNAIREIPRNIGELRNLVSLH 680
Query: 485 XXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPI 538
+ +L+ L +L LNL N T+ ++ L+ I+ +NP+
Sbjct: 681 AYNNQISYL--PPSLLSLNDLQQLNLSGNNLTALPSAIYNIFSLKEINFDDNPL 732
Score = 81 (33.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 48/175 (27%), Positives = 72/175 (41%)
Query: 95 VELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSV 154
V L+ + FP+ I+ I + +N+I A L L IL L +N L S+
Sbjct: 146 VNLEAKGLQEFPKDILK--IKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSL 203
Query: 155 PTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLR 214
P+ + L L L V N + + + LG + L + N + L L
Sbjct: 204 PSEIQL-LHNLRILNVSHNHISHIPK-EISQLGNIRQLFFYNNYIENFPSD-LECLGNLE 260
Query: 215 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSML-EAGCFKGLSYLKRLEITG 268
L L N+L+ IP L L L L + N + +A CF L L L++TG
Sbjct: 261 ILSLGKNKLRHIPDT-LPSLKTLRVLNLEYNQLTTFPKALCF--LPKLISLDLTG 312
Score = 62 (26.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 505 LYHLNLKENAFTSFSESMLAWPELRTIDIAENPIE----CGCNILWLREMLVRRNTSAVF 560
L HL L EN FSE + L+ +D+ +N I+ N++ L +++ N F
Sbjct: 512 LLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETF 571
Query: 561 CNSPAPLKYKSLISLSAEDL 580
L+ ++ LS L
Sbjct: 572 PRELCTLENLQVLDLSENQL 591
Score = 48 (22.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 504 NLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIE-CGCNILWLREMLVRRNTSAVFCN 562
+L+ L L N F +F + L+ +D++EN ++ +I L+ + +S F +
Sbjct: 557 SLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIH 616
Query: 563 SPAPL-KYKSLISLSAEDL 580
P L + +SL L+ +
Sbjct: 617 FPIELCQLQSLEQLNISQI 635
>FB|FBgn0032479 [details] [associations]
symbol:CG16974 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
HSSP:P07359 GeneTree:ENSGT00700000105954 FlyBase:FBgn0032479
ChiTaRS:CG16974 EMBL:BT022757 RefSeq:NP_001246018.1
RefSeq:NP_609610.2 UniGene:Dm.10738 SMR:Q9VK28 STRING:Q9VK28
EnsemblMetazoa:FBtr0080489 EnsemblMetazoa:FBtr0305555 GeneID:34713
KEGG:dme:Dmel_CG16974 UCSC:CG16974-RA InParanoid:Q9VK28 OMA:HRIRENC
GenomeRNAi:34713 NextBio:789834 Uniprot:Q9VK28
Length = 1257
Score = 188 (71.2 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 91/371 (24%), Positives = 156/371 (42%)
Query: 8 ELRSKCMN---PYEPSRFSTRDPSCNLQEANLDVIPSHSNPSIQRLVLSTNRIKTVDSAI 64
E R +C++ P R + S N + +N ++ +Q L L + + +
Sbjct: 212 ENRLECLHWAIPLAVRRVKVLEMSGN-RLSNCSLLNLQYMKQLQELHLDRSELTYLPQRF 270
Query: 65 PIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKH--FPQQIVCSIISPRRVEI 121
LS L+ ++LS +P F KL L L+ N+ P + + + +++
Sbjct: 271 LGELSELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQTAADLQVLDL 330
Query: 122 FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 181
NR+ F LR L+L NQL+S+ S L L +L + N + +
Sbjct: 331 -SDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVIDRK 389
Query: 182 AFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT----KQLSK-LTR 236
AF L L AL++ G LT +S F+ L LR L L+ N+ + +P+ +Q S L R
Sbjct: 390 AFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGLFQRQRSLVLLR 449
Query: 237 LEELEIGQ--NGFSMLEAGCF--KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXX 292
++E I Q N S + + L L+ L + LT + FA+
Sbjct: 450 IDETPIEQFSNWISRYDESLVDPQVLHRLRYLSVQQNRKLTYLPATLFANTPNIRELLLA 509
Query: 293 XXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILW 352
+ + GL L L+++ N+ S E++ +L ++I N +C C++ W
Sbjct: 510 ENGLLQLPTQ--ISGLSRLQRLSVRGNSLGSLPENIKELRQLHYLNILGNEYQCDCSMYW 567
Query: 353 LREMLVRRNTS 363
L L +TS
Sbjct: 568 LTAWLANTSTS 578
Score = 175 (66.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 68/255 (26%), Positives = 111/255 (43%)
Query: 18 EPSRFSTRDPSCNLQEANLDVIPSHSNPSIQR---LVLSTNRIKTVDSAIPIYLS-LQ-- 71
+P F + NL E L+ + +++R L +S NR+ Y+ LQ
Sbjct: 198 QPRSFEYME-RLNLAENRLECLHWAIPLAVRRVKVLEMSGNRLSNCSLLNLQYMKQLQEL 256
Query: 72 HVDLSHTTWLIIPIGGFEPQEKLVELQLNHNKHFPQQIVCSIISPRRVEIFGQNRISRID 131
H+D S T+L G + +++ L N P+ I + R+ + G NR+S +
Sbjct: 257 HLDRSELTYLPQRFLGELSELRMLNLSQNLLTELPRDIFVGALKLERLYLSG-NRLSVLP 315
Query: 132 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 191
F+ L++L L DN+L S P F G L +L + N ++ + L L
Sbjct: 316 FMLFQTAADLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQ 375
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
LDL L+ I AF L L +L ++ N L + + L L +L++ +N F L
Sbjct: 376 LDLSQNSLSVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLP 435
Query: 252 AGCFKGLSYLKRLEI 266
+G F+ L L I
Sbjct: 436 SGLFQRQRSLVLLRI 450
Score = 173 (66.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 59/237 (24%), Positives = 112/237 (47%)
Query: 47 IQRLVLSTNRIKTVDSAIPIYLS-LQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK-- 103
++RL L+ NR++ + AIP+ + ++ +++S + + ++L EL L+ ++
Sbjct: 205 MERLNLAENRLECLHWAIPLAVRRVKVLEMSGNRLSNCSLLNLQYMKQLQELHLDRSELT 264
Query: 104 HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLG 163
+ PQ+ + + R + + QN ++ + + F G L LYL N+L +P F
Sbjct: 265 YLPQRFLGELSELRMLNL-SQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQTAA 323
Query: 164 MLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRL 223
L L + N + D F G+L L L+ L +I ++ L LR L L+ N L
Sbjct: 324 DLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSL 383
Query: 224 QSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
I K L L L + N ++L + F+ L L++L+++ + ++ G F
Sbjct: 384 SVIDRKAFESLDHLLALNVSGNNLTLLSSIIFQSLHALRQLDLS-RNQFKQLPSGLF 439
Score = 159 (61.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 82/360 (22%), Positives = 154/360 (42%)
Query: 213 LRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNL 272
++ L ++ NRL + L + +L+EL + ++ + L LS L+ L ++ + L
Sbjct: 229 VKVLEMSGNRLSNCSLLNLQYMKQLQELHLDRSELTYLPQRFLGELSELRMLNLS-QNLL 287
Query: 273 TRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWP 332
T + + F + +L L+L +N SF ++ A
Sbjct: 288 TELPRDIFVGALKLERLYLSGNRLSV-LPFMLFQTAADLQVLDLSDNRLLSFPDNFFARN 346
Query: 333 -ELRTIDIAENPIEC-GCNILW----LREMLVRRNTSAVFCNSPAPLKYKSLISLSAEDL 386
+LR + + N ++ G + L+ LR++ + +N+ +V ++SL L A L
Sbjct: 347 GQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSLSVIDRKA----FESLDHLLA--L 400
Query: 387 GCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPT----KQLSK-LTRLEELEIGQ--N 439
+G LT +S F+ L LR L L+ N+ + +P+ +Q S L R++E I Q N
Sbjct: 401 NVSGNNLTLLSSIIFQSLHALRQLDLSRNQFKQLPSGLFQRQRSLVLLRIDETPIEQFSN 460
Query: 440 GFSMLEAGCF--KGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXIIEED 497
S + + L L+ L + LT + FA+ + +
Sbjct: 461 WISRYDESLVDPQVLHRLRYLSVQQNRKLTYLPATLFANTPNIRELLLAENGLLQLPTQ- 519
Query: 498 ALVGLPNLYHLNLKENAFTSFSESMLAWPELRTIDIAENPIECGCNILWLREMLVRRNTS 557
+ GL L L+++ N+ S E++ +L ++I N +C C++ WL L +TS
Sbjct: 520 -ISGLSRLQRLSVRGNSLGSLPENIKELRQLHYLNILGNEYQCDCSMYWLTAWLANTSTS 578
>MGI|MGI:2177651 [details] [associations]
symbol:Vasn "vasorin" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0071456 "cellular response
to hypoxia" evidence=IMP] [GO:0071461 "cellular response to redox
state" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
SMART:SM00181 MGI:MGI:2177651 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0071461
SUPFAM:SSF49265 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0071456 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 CTD:114990 eggNOG:NOG273568
HOGENOM:HOG000261606 HOVERGEN:HBG084318 OMA:VTQLRPN
OrthoDB:EOG4GTKD4 EMBL:AJ458938 EMBL:AK012169 EMBL:AK083684
EMBL:AK132325 EMBL:BC050274 IPI:IPI00321074 RefSeq:NP_647468.2
UniGene:Mm.482140 ProteinModelPortal:Q9CZT5 SMR:Q9CZT5
PhosphoSite:Q9CZT5 PaxDb:Q9CZT5 PRIDE:Q9CZT5
Ensembl:ENSMUST00000038770 GeneID:246154 KEGG:mmu:246154
UCSC:uc007xzz.2 InParanoid:Q9CZT5 NextBio:387103 Bgee:Q9CZT5
Genevestigator:Q9CZT5 GermOnline:ENSMUSG00000039646 Uniprot:Q9CZT5
Length = 673
Score = 184 (69.8 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 73/239 (30%), Positives = 107/239 (44%)
Query: 39 IPSHSNPSIQRLVLSTNRIKTVDSAIPIYL-SLQHVDLSHTTWLIIPIGGFEPQEKLVEL 97
+P P L + N I T+D L LQ +DLS +P G F+P L L
Sbjct: 47 VPRDVPPDTVGLYIFENGITTLDVGCFAGLPGLQLLDLSQNQITSLPGGIFQPLVNLSNL 106
Query: 98 QLNHNK-H-FPQQIVCSIISPRRVE--IFGQNRISRIDQACFEGLTALRILYLDDNQLRS 153
L NK H + + RR+E G+NRI I F+ L L L L DN+LR
Sbjct: 107 DLTANKLHEISNETFRGL---RRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELRV 163
Query: 154 VPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFRGLSGL 213
+P P ++L L L + N L G + + AL L G GL + + F L L
Sbjct: 164 LP-P--LHLPRLLLLDLSHNSIPALEAGILD-TANVEALRLAGLGLRQLDEGLFGRLLNL 219
Query: 214 RSLVLTDNRLQSIPT--KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 270
L ++DN+L+ +P+ + L LTRL G + + GL+ L+ L+++ S
Sbjct: 220 HDLDVSDNQLEHMPSVIQGLRGLTRLRLA--GNTRIAQIRPEDLAGLTALQELDVSNLS 276
Score = 168 (64.2 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 52/160 (32%), Positives = 78/160 (48%)
Query: 121 IFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLAD 180
IF +N I+ +D CF GL L++L L NQ+ S+P F L L+ L + N +++
Sbjct: 60 IF-ENGITTLDVGCFAGLPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISN 118
Query: 181 GAFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEEL 240
F GL RL L L + +I AF L L L L DN L+ +P L +L L+
Sbjct: 119 ETFRGLRRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELRVLPPLHLPRLLLLD-- 176
Query: 241 EIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 280
+ N LEAG + ++ L + G L ++ +G F
Sbjct: 177 -LSHNSIPALEAGILDTAN-VEALRLAGLG-LRQLDEGLF 213
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 71/275 (25%), Positives = 107/275 (38%)
Query: 124 QNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAF 183
QN+I+ + F+ L L L L N+L + +F L L L +G N + GAF
Sbjct: 86 QNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRGLRRLERLYLGKNRIRHIQPGAF 145
Query: 184 NGLGRLSALDLRGAGLTNISDNAFRGLSGLR--SLVLTDNRLQSIPTKQLSKL--TRLEE 239
+ L RL L+L+ + DN R L L L+L D SIP + L +E
Sbjct: 146 DALDRL--LELK------LPDNELRVLPPLHLPRLLLLDLSHNSIPALEAGILDTANVEA 197
Query: 240 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXX 299
L + G L+ G F L L L+++ N
Sbjct: 198 LRLAGLGLRQLDEGLFGRLLNLHDLDVS--DNQLEHMPSVIQGLRGLTRLRLAGNTRIAQ 255
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESMLA-WPELRTIDIAENPIECGCNILW----LR 354
I L GL L L++ + + + + +P LR + A NP C C + W +R
Sbjct: 256 IRPEDLAGLTALQELDVSNLSLQALPSDLSSLFPRLRLLAAARNPFNCLCPLSWFGPWVR 315
Query: 355 EM-LVRRNTSAVFCNSPAPLKYKSLISLSAEDLGC 388
E +V + C+ P + L+ L D GC
Sbjct: 316 ENHVVLASPEETRCHFPPKNAGRLLLDLDYADFGC 350
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 64/253 (25%), Positives = 109/253 (43%)
Query: 198 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 257
G+T + F GL GL+ L L+ N++ S+P L L L++ N + F+G
Sbjct: 64 GITTLDVGCFAGLPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEISNETFRG 123
Query: 258 LSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLK 317
L L+RL + G + + ++ GAF D + + LP L L+L
Sbjct: 124 LRRLERLYL-GKNRIRHIQPGAF-DALDRLLELKLPDNELRVLPP---LHLPRLLLLDLS 178
Query: 318 ENAFTSFSESML--AWPE-LRTIDIAENPIECGC--NILWLREMLVRRNTSAVFCNSPAP 372
N+ + +L A E LR + ++ G +L L ++ V N + P+
Sbjct: 179 HNSIPALEAGILDTANVEALRLAGLGLRQLDEGLFGRLLNLHDLDVSDNQLE---HMPSV 235
Query: 373 LKYKSLISLSAEDLGCAG-AGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRL 431
++ L L+ L AG + I GL+ L+ L +++ LQ++P+ S RL
Sbjct: 236 IQ--GLRGLTR--LRLAGNTRIAQIRPEDLAGLTALQELDVSNLSLQALPSDLSSLFPRL 291
Query: 432 EELEIGQNGFSML 444
L +N F+ L
Sbjct: 292 RLLAAARNPFNCL 304
Score = 129 (50.5 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 51/177 (28%), Positives = 73/177 (41%)
Query: 144 LYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNIS 203
LY+ +N + ++ F L L L + N T+L G F L LS LDL L IS
Sbjct: 58 LYIFENGITTLDVGCFAGLPGLQLLDLSQNQITSLPGGIFQPLVNLSNLDLTANKLHEIS 117
Query: 204 DNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKR 263
+ FRGL L L L NR++ I L RL EL++ N +L +L R
Sbjct: 118 NETFRGLRRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELRVLPP------LHLPR 171
Query: 264 LEITGAS-NLTRVRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKEN 319
L + S N + D ++EG L NL+ L++ +N
Sbjct: 172 LLLLDLSHNSIPALEAGILDTANVEALRLAGLGLRQ-LDEGLFGRLLNLHDLDVSDN 227
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 56/228 (24%), Positives = 97/228 (42%)
Query: 240 LEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAFADXXXXXXXXXXXXXXXXX 299
L I +NG + L+ GCF GL L+ L+++ + +T + G F
Sbjct: 58 LYIFENGITTLDVGCFAGLPGLQLLDLS-QNQITSLPGGIFQPLVNLSNLDLTANKLHEI 116
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSESML-AWPELRTIDIAENPIECGCNILWLREMLV 358
E GL L L L +N A L + + +N + + R +L+
Sbjct: 117 SNE-TFRGLRRLERLYLGKNRIRHIQPGAFDALDRLLELKLPDNELRVLPPLHLPRLLLL 175
Query: 359 RRNTSAVFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTDNRLQ 418
+ +++ PA L+ L + + E L AG GL + + F L L L ++DN+L+
Sbjct: 176 DLSHNSI----PA-LEAGILDTANVEALRLAGLGLRQLDEGLFGRLLNLHDLDVSDNQLE 230
Query: 419 SIPT--KQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGAS 464
+P+ + L LTRL G + + GL+ L+ L+++ S
Sbjct: 231 HMPSVIQGLRGLTRLRLA--GNTRIAQIRPEDLAGLTALQELDVSNLS 276
>MGI|MGI:2448607 [details] [associations]
symbol:Nyx "nyctalopin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0007601 "visual perception"
evidence=IMP] [GO:0050896 "response to stimulus" evidence=IEA]
MGI:MGI:2448607 GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050896
GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477 HOVERGEN:HBG031762
KO:K08129 OrthoDB:EOG43JC4W EMBL:AY114303 EMBL:BC035244
EMBL:BC048381 EMBL:AK038912 IPI:IPI00117261 RefSeq:NP_775591.1
UniGene:Mm.90233 ProteinModelPortal:P83503 SMR:P83503 STRING:P83503
PhosphoSite:P83503 PRIDE:P83503 Ensembl:ENSMUST00000050434
GeneID:236690 KEGG:mmu:236690 GeneTree:ENSGT00690000101803
InParanoid:P83503 NextBio:383039 Bgee:P83503 CleanEx:MM_NYX
Genevestigator:P83503 GermOnline:ENSMUSG00000051228 Uniprot:P83503
Length = 476
Score = 181 (68.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 73/269 (27%), Positives = 117/269 (43%)
Query: 19 PSRFSTRDPSCNLQEANLDVIPSHSN---PSIQRLVLSTNRIKTVD-SAIPIYLSLQHVD 74
P F S +L L ++ + PS++RL L N + + A L +
Sbjct: 52 PQEFPCEAASIDLDRNGLRILGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELR 111
Query: 75 LSHTTWL-IIPIGGFEPQEKLVELQLNHNKHF--PQQIVCSIISPRRVEIFGQNRISRID 131
L+H L + + F +L L L + F P++++ + + R + F N R+
Sbjct: 112 LAHNGELRYLHVRTFAALGRLRRLDLAACRLFSVPERLLAELPALRELTAF-DNLFRRVP 170
Query: 132 QACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADGAFNGLGRLSA 191
A GL L + + +++ +V + S + + L L + N + GAF G L
Sbjct: 171 GA-LRGLANLTHAHFERSRIEAVASGSLLGMRRLRSLSLQANRVRAVHAGAFGDCGALED 229
Query: 192 LDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLE 251
L L L + AFRGL LR+L L N L S+ S L LE L + +N + +E
Sbjct: 230 LLLNDNLLATLPAAAFRGLRRLRTLNLGGNALGSVARAWFSDLAELELLYLDRNSITFVE 289
Query: 252 AGCFKGLSYLKRLEITGASNLTRVRKGAF 280
G F+ LS L L + G + LT + AF
Sbjct: 290 EGAFQNLSGLLALHLNG-NRLTVLSWAAF 317
Score = 166 (63.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 74/281 (26%), Positives = 114/281 (40%)
Query: 300 IEEGALVGLPNLYHLNLKENAFTSFSE--SMLAWPELRTIDIAENPIECGCNILWLREML 357
I GA GLP L L L N + + A LR +D+A + L L E+
Sbjct: 96 ITPGAFKGLPRLAELRLAHNGELRYLHVRTFAALGRLRRLDLAACRLFSVPERL-LAELP 154
Query: 358 VRRNTSA---VFCNSPAPLKYKSLISLSAEDLGCAGAGLTNISDNAFRGLSGLRSLVLTD 414
R +A +F P L+ L +L+ + + ++ + G+ LRSL L
Sbjct: 155 ALRELTAFDNLFRRVPGALR--GLANLTHAHF--ERSRIEAVASGSLLGMRRLRSLSLQA 210
Query: 415 NRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTRVRKGAF 474
NR++++ LE+L + N + L A F+GL L+ L + G + L V + F
Sbjct: 211 NRVRAVHAGAFGDCGALEDLLLNDNLLATLPAAAFRGLRRLRTLNL-GGNALGSVARAWF 269
Query: 475 ADXXXXXXXXXXXXXXXXIIEEDALVGLPNLYHLNLKENAFTSFSESMLAWPE--LRTID 532
+D +EE A L L L+L N T S + P L +
Sbjct: 270 SDLAELELLYLDRNSIT-FVEEGAFQNLSGLLALHLNGNRLTVLSWAAFQ-PGFFLGRLF 327
Query: 533 IAENPIECGCNILWLREMLVRRNTSA-VFCNSPAPLKYKSL 572
+ NP C C + WLR+ + A V C SP + + L
Sbjct: 328 LFRNPWRCDCQLEWLRDWMEGSGRVADVACASPGSVAGQDL 368
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 70/263 (26%), Positives = 102/263 (38%)
Query: 215 SLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKGLSYLKRLEITGASNLTR 274
S+ L N L+ + + L L L + N S + G FKGL L L + L
Sbjct: 61 SIDLDRNGLRILGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRY 120
Query: 275 VRKGAFADXXXXXXXXXXXXXXXXXIEEGALVGLPNLYHLNLKENAFTSFSESMLAWPEL 334
+ FA + E L LP L L +N F ++ L
Sbjct: 121 LHVRTFA-ALGRLRRLDLAACRLFSVPERLLAELPALRELTAFDNLFRRVPGALRGLANL 179
Query: 335 RTIDIAENPIECGCN--ILWLREMLVRRNTSAVFCNSPAPLKYKSLISLSA-EDLGCAGA 391
+ IE + +L +R + R+ S + N + + A EDL
Sbjct: 180 THAHFERSRIEAVASGSLLGMRRL---RSLS-LQANRVRAVHAGAFGDCGALEDLLLNDN 235
Query: 392 GLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELEIGQNGFSMLEAGCFKG 451
L + AFRGL LR+L L N L S+ S L LE L + +N + +E G F+
Sbjct: 236 LLATLPAAAFRGLRRLRTLNLGGNALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQN 295
Query: 452 LSYLKRLEITGASNLTRVRKGAF 474
LS L L + G + LT + AF
Sbjct: 296 LSGLLALHLNG-NRLTVLSWAAF 317
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 43/143 (30%), Positives = 67/143 (46%)
Query: 122 FGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFIYLGMLAELRVGLNVFTTLADG 181
F ++RI + G+ LR L L N++R+V +F G L +L + N+ TL
Sbjct: 184 FERSRIEAVASGSLLGMRRLRSLSLQANRVRAVHAGAFGDCGALEDLLLNDNLLATLPAA 243
Query: 182 AFNGLGRLSALDLRGAGLTNISDNAFRGLSGLRSLVLTDNRLQSIPTKQLSKLTRLEELE 241
AF GL RL L+L G L +++ F L+ L L L N + + L+ L L
Sbjct: 244 AFRGLRRLRTLNLGGNALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALH 303
Query: 242 IGQNGFSMLEAGCFKGLSYLKRL 264
+ N ++L F+ +L RL
Sbjct: 304 LNGNRLTVLSWAAFQPGFFLGRL 326
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 47/168 (27%), Positives = 67/168 (39%)
Query: 45 PSIQRLVLSTNRIKTVDSAIPIYLSLQHVDLSHTTWLIIPIGGFEPQEKLVELQLNHNK- 103
P+++ L N + V A+ +L H + + G +L L L N+
Sbjct: 154 PALRELTAFDNLFRRVPGALRGLANLTHAHFERSRIEAVASGSLLGMRRLRSLSLQANRV 213
Query: 104 ---HFPQQIVCSIISPRRVEIFGQNRISRIDQACFEGLTALRILYLDDNQLRSVPTPSFI 160
H C + + N ++ + A F GL LR L L N L SV F
Sbjct: 214 RAVHAGAFGDCGALEDL---LLNDNLLATLPAAAFRGLRRLRTLNLGGNALGSVARAWFS 270
Query: 161 YLGMLAELRVGLNVFTTLADGAFNGLGRLSALDLRGAGLTNISDNAFR 208
L L L + N T + +GAF L L AL L G LT +S AF+
Sbjct: 271 DLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRLTVLSWAAFQ 318
WARNING: HSPs involving 557 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 581 548 0.00096 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 807
No. of states in DFA: 611 (65 KB)
Total size of DFA: 266 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.99u 0.08s 42.07t Elapsed: 00:00:19
Total cpu time: 42.35u 0.09s 42.44t Elapsed: 00:00:23
Start: Thu Aug 15 12:05:50 2013 End: Thu Aug 15 12:06:13 2013
WARNINGS ISSUED: 2