BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8554
(148 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Y3A|B Chain B, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 302
Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 30 ALNRTERDLPHHDEKTWLV-RMSRAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAP 87
+L E LPHH+E+TW V +++R QAE +LSG+ DGTFLIR S+ G YA S+V G
Sbjct: 180 SLMEDEDALPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRESSQRGCYACSVVVDGDT 239
Query: 88 KHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFAPASG 144
KHC++Y T GFGFAEP+N+Y SL LVLHY SL +HND L TLA+PV AP G
Sbjct: 240 KHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDALTVTLAHPVRAPGPG 296
>pdb|1QAD|A Chain A, Crystal Structure Of The C-Terminal Sh2 Domain Of The P85
Alpha Regulatory Subunit Of Phosphoinositide 3-Kinase:
An Sh2 Domain Mimicking Its Own Substrate
Length = 111
Score = 129 bits (324), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 76/106 (71%), Gaps = 2/106 (1%)
Query: 37 DLPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYE 94
DLPHHDEKTW V S R +AE LL G+ DGTFL+R S+ G YA S+V G KHC++ +
Sbjct: 2 DLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINK 61
Query: 95 TERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFA 140
T G+GFAEP+N+Y SL LVLHY SL +HND L TLAYPV+A
Sbjct: 62 TATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA 107
>pdb|1BFI|A Chain A, Solution Structure Of The C-Terminal Sh2 Domain Of The
P85alpha Regulatory Subunit Of Phosphoinositide
3-Kinase, Nmr, 30 Structures
pdb|1BFJ|A Chain A, Solution Structure Of The C-Terminal Sh2 Domain Of The
P85alpha Regulatory Subunit Of Phosphoinositide
3-Kinase, Nmr, Minimized Average Structure
Length = 112
Score = 129 bits (324), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 76/106 (71%), Gaps = 2/106 (1%)
Query: 37 DLPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYE 94
DLPHHDEKTW V S R +AE LL G+ DGTFL+R S+ G YA S+V G KHC++ +
Sbjct: 3 DLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINK 62
Query: 95 TERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFA 140
T G+GFAEP+N+Y SL LVLHY SL +HND L TLAYPV+A
Sbjct: 63 TATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA 108
>pdb|1H9O|A Chain A, Phosphatidylinositol 3-Kinase, P85-Alpha Subunit:
C-Terminal Sh2 Domain Complexed With A Tyr751
Phosphopeptide From The Pdgf Receptor, Crystal Structure
At 1.79 A
pdb|1PIC|A Chain A, Phosphatidylinositol 3-Kinase, P85-Alpha Subunit: C-
Terminal Sh2 Domain Complexed With A Tyr751
Phosphopeptide From The Pdgf Receptor, Nmr, Minimized
Mean Structure
Length = 112
Score = 125 bits (315), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 38 LPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAPKHCLVYET 95
+PHHDEKTW V S R +AE LL G+ DGTFL+R S+ G YA S+V G KHC++ +T
Sbjct: 4 IPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKT 63
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFA 140
G+GFAEP+N+Y SL LVLHY SL +HND L TLAYPV+A
Sbjct: 64 ATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA 108
>pdb|3HHM|B Chain B, Crystal Structure Of P110alpha H1047r Mutant In Complex
With Nish2 Of P85alpha And The Drug Wortmannin
pdb|3HIZ|B Chain B, Crystal Structure Of P110alpha H1047r Mutant In Complex
With Nish2 Of P85alpha
Length = 373
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Query: 30 ALNRTERDLPHHDEKTWLVRMS-RAQAEALLSGRPDGTFLIRPSTT-GQYALSIVCSGAP 87
+L + DLPHHDEKTW V S R +AE LL G+ DGTFL+R S+ G YA S+V G
Sbjct: 287 SLVEDDEDLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEV 346
Query: 88 KHCLVYETERGFGFAEPFNIYPSLGAL 114
KHC++ +T G+GFAEP+N+Y SL L
Sbjct: 347 KHCVINKTATGYGFAEPYNLYSSLKEL 373
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
+SR + L DGTFL+R ++T G Y L++ G K ++ + +GF++P
Sbjct: 17 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPL- 75
Query: 107 IYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFAPASGMTV 147
+ S+ L+ HY SL ++N L L YPV V
Sbjct: 76 TFSSVVELINHYRNESLAQYNPKLDVKLLYPVSKYQQDQVV 116
>pdb|2DLZ|A Chain A, Solution Structure Of The Sh2 Domain Of Human Protein
Vav-2
Length = 118
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 50 MSRAQAEALLSGRPDGTFLIR--PSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
M R Q + LL GT+LIR P+ ++A+SI + KH V E + E
Sbjct: 23 MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEA-KK 81
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYPVFAPASG 144
+ SL LV +Y +SL+E L TTL YP P+SG
Sbjct: 82 FDSLLELVEYYQCHSLKESFKQLDTTLKYPYSGPSSG 118
>pdb|1FU5|A Chain A, Nmr Structure Of The N-Sh2 Domain Of The P85 Subunit Of
Pi3- Kinase Complexed To A Doubly Phosphorylated Peptide
Derived From Polyomavirus Middle T Antigen
pdb|1FU6|A Chain A, Nmr Structure Of The N-Sh2 Domain Of The P85 Subunit Of
Pi3- Kinase
Length = 111
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
+SR + L DGTFL+R ++T G Y L++ G K ++ + +GF++P
Sbjct: 18 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPL- 76
Query: 107 IYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
+ S+ L+ HY SL ++N L L YPV
Sbjct: 77 TFNSVVELINHYRNESLAQYNPKLDVKLLYPV 108
>pdb|2IUG|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain
pdb|2IUH|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain In Complex With C-Kit Phosphotyrosyl Peptide
pdb|2IUI|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain In Complex With Pdgfr Phosphotyrosyl Peptide
pdb|2IUI|B Chain B, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain In Complex With Pdgfr Phosphotyrosyl Peptide
Length = 120
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
+SR + L DGTFL+R ++T G Y L++ G K ++ + +GF++P
Sbjct: 18 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPL- 76
Query: 107 IYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
+ S+ L+ HY SL ++N L L YPV
Sbjct: 77 TFSSVVELINHYRNESLAQYNPKLDVKLLYPV 108
>pdb|2RD0|B Chain B, Structure Of A Human P110alpha/p85alpha Complex
pdb|4A55|B Chain B, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 279
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
+SR + L DGTFL+R ++T G Y L++ G K ++ + +GF++P
Sbjct: 17 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPL- 75
Query: 107 IYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFAPASGMTV 147
+ S+ L+ HY SL ++N L L YPV V
Sbjct: 76 TFSSVVELINHYRNESLAQYNPKLDVKLLYPVSKYQQDQVV 116
>pdb|2PNA|A Chain A, Structure Of An Sh2 Domain Of The P85 Alpha Subunit Of
Phosphatidylinositol-3-Oh Kinase
pdb|2PNB|A Chain A, Structure Of An Sh2 Domain Of The P85 Alpha Subunit Of
Phosphatidylinositol-3-Oh Kinase
Length = 104
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
+SR + L DGTFL+R ++T G Y L++ G K ++ + +GF++P
Sbjct: 11 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPL- 69
Query: 107 IYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
+ S+ L+ HY SL ++N L L YPV
Sbjct: 70 TFNSVVELINHYRNESLAQYNPKLDVKLLYPV 101
>pdb|1OO3|A Chain A, P395s Mutant Of The P85 Regulatory Subunit Of The N-
Terminal Src Homology 2 Domain Of Pi3-Kinase
pdb|1OO4|A Chain A, P395s Mutant Of The P85 Regulatory Subunit Of The N-
Terminal Src Homology 2 Domain Of Pi3-Kinase Complexed
To A Peptide Derived From Pdgfr
Length = 111
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT---GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
+SR + L DGTFL+R ++T G Y L++ G K ++ + +GF++
Sbjct: 18 ISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDSL- 76
Query: 107 IYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
+ S+ L+ HY SL ++N L L YPV
Sbjct: 77 TFNSVVELINHYRNESLAQYNPKLDVKLLYPV 108
>pdb|2LNW|A Chain A, Identification And Structural Basis For A Novel
Interaction Between Vav2 And Arap3
pdb|2LNX|A Chain A, Solution Structure Of Vav2 Sh2 Domain
Length = 122
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 50 MSRAQAEALLSGRPDGTFLIR--PSTTGQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
M R Q + LL GT+LIR P+ ++A+SI + KH V E + E
Sbjct: 29 MERQQTDNLLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEA-KK 87
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ SL LV +Y +SL+E L TTL YP
Sbjct: 88 FDSLLELVEYYQCHSLKESFKQLDTTLKYP 117
>pdb|2LCT|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A
Syk-Derived Doubly Phosphorylated Peptide
Length = 107
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
M RA AE++L+ R DGTFL+R ++A+SI + KH + E + E
Sbjct: 16 MERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEK-KA 74
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ L LV Y NSL++ L TTL +P
Sbjct: 75 FRGLTELVEFYQQNSLKDCFKSLDTTLQFP 104
>pdb|2CRH|A Chain A, Solution Structure Of The Sh2 Domain Of Human Proto-
Oncogene Protein Vav1
pdb|2ROR|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A
Tyrosine-Phosphorylated Peptide From Slp76
Length = 138
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
M RA AE++L+ R DGTFL+R ++A+SI + KH + E + E
Sbjct: 33 MERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEK-KA 91
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYPVFAP 141
+ L LV Y NSL++ L TTL +P P
Sbjct: 92 FRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKEP 125
>pdb|2EOB|A Chain A, Solution Structure Of The Second Sh2 Domain From Rat Plc
Gamma-2
Length = 124
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 41 HDEKTWLV-RMSRAQAEALLSGRP-DGTFLIRPST-TGQYALSIVCSGAPKHCLVYETER 97
H+ K W R+SR +AE +L P DG FLIR T YA++ G KHC + R
Sbjct: 16 HESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDSYAITFRARGKVKHCRINRDGR 75
Query: 98 GFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
F + SL LV +Y E+H K L YPV
Sbjct: 76 HFVLGTS-AYFESLVELVSYY-----EKHALYRKMRLRYPV 110
>pdb|1MIL|A Chain A, Transforming Protein
Length = 104
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETE 96
++SR +AEALL + +G FL+R STT GQY L+ + SG PKH L+ + E
Sbjct: 13 KLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPE 60
>pdb|1TCE|A Chain A, Solution Nmr Structure Of The Shc Sh2 Domain Complexed
With A Tyrosine-Phosphorylated Peptide From The T-Cell
Receptor, Minimized Average Structure
Length = 107
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETE 96
++SR +AEALL + +G FL+R STT GQY L+ SG PKH L+ + E
Sbjct: 13 KLSRREAEALL--QLNGDFLVRESTTTPGQYVLTGSQSGQPKHLLLVDPE 60
>pdb|1R1P|A Chain A, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|B Chain B, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|C Chain C, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|D Chain D, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1Q|A Chain A, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1Q|B Chain B, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|A Chain A, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|C Chain C, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|E Chain E, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|G Chain G, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
Length = 100
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAEPF 105
+SR QAE LL G+ G F+IR S + G +++S+ +H V +G F + E F
Sbjct: 16 LSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKF 75
Query: 106 NIYPSLGALVLHYAANSLEEHN 127
PSL LV +Y S+ +
Sbjct: 76 ---PSLNKLVDYYRTTSISKQK 94
>pdb|2FCI|A Chain A, Structural Basis For The Requirement Of Two
Phosphotyrosines In Signaling Mediated By Syk Tyrosine
Kinase
pdb|2PLD|A Chain A, Nuclear Magnetic Resonance Structure Of An Sh2 Domain Of
Phospholipase C-gamma1 Complexed With A High Affinity
Binding Peptide
pdb|2PLE|A Chain A, Nuclear Magnetic Resonance Structure Of An Sh2 Domain Of
Phospholipase C-Gamma1 Complexed With A High Affinity
Binding Peptide
Length = 105
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 41 HDEKTWL-VRMSRAQAEALLSGRP-DGTFLIRPSTT-GQYALSIVCSGAPKHCLVYETER 97
H+ K W ++RAQAE +L P DG FL+R YA+S G KHC V + +
Sbjct: 6 HESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQ 65
Query: 98 G--FGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
G +E + SL L+ +Y E+H K L YP+
Sbjct: 66 TVMLGNSE----FDSLVDLISYY-----EKHPLYRKMKLRYPI 99
>pdb|3GQI|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 226
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 41 HDEKTWL-VRMSRAQAEALLSGRP-DGTFLIRPSTT-GQYALSIVCSGAPKHCLVYETER 97
H+ K W ++RAQAE +L P DG FL+R YA+S G KHC V + +
Sbjct: 119 HESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQ 178
Query: 98 G--FGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFAPA 142
G +E + SL L+ +Y E+H K L YP+ A
Sbjct: 179 TVMLGNSE----FDSLVDLISYY-----EKHPLYRKMKLRYPINEEA 216
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 49 RMSRAQAEALLS------GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG-- 98
R R AE LL+ G PDG+FL+R S T G Y LS +G +HC ++ +
Sbjct: 15 RDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGT 74
Query: 99 --FGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
F + ++ SL L+ HY L ++ + L+ PV
Sbjct: 75 PKFFLTDNL-VFDSLYDLITHYQQVPLR--CNEFEMRLSEPV 113
>pdb|4EY0|A Chain A, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|B Chain B, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|C Chain C, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|D Chain D, Structure Of Tandem Sh2 Domains From Plcgamma1
Length = 246
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 41 HDEKTWL-VRMSRAQAEALLSGRP-DGTFLIRPSTT-GQYALSIVCSGAPKHCLVYETER 97
H+ K W ++RAQAE +L P DG FL+R YA+S G KHC V + +
Sbjct: 119 HESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQ 178
Query: 98 G--FGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
G +E + SL L+ +Y E+H K L YP+
Sbjct: 179 TVMLGNSE----FDSLVDLISYY-----EKHPLYRKMKLRYPI 212
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 49 RMSRAQAEALLS------GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG-- 98
R R AE LL+ G PDG+FL+R S T G Y LS +G +HC ++ +
Sbjct: 15 RDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGT 74
Query: 99 --FGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
F + ++ SL L+ HY L ++ + L+ PV
Sbjct: 75 PKFFLTDNL-VFDSLYDLITHYQQVPLR--CNEFEMRLSEPV 113
>pdb|4FBN|A Chain A, Insights Into Structural Integration Of The Plcgamma
Regulatory Region And Mechanism Of Autoinhibition And
Activation Based On Key Roles Of Sh2 Domains
Length = 246
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 41 HDEKTWL-VRMSRAQAEALLSGRP-DGTFLIRPSTT-GQYALSIVCSGAPKHCLVYETER 97
H+ K W ++RAQAE +L P DG FL+R YA+S G KHC V + +
Sbjct: 119 HESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQ 178
Query: 98 G--FGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
G +E + SL L+ +Y E+H K L YP+
Sbjct: 179 TVMLGNSE----FDSLVDLISYY-----EKHPLYRKMKLRYPI 212
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 49 RMSRAQAEALLS------GRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG-- 98
R R AE LL+ G PDG+FL+R S T G Y LS +G +HC ++ +
Sbjct: 15 RDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGT 74
Query: 99 --FGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPV 138
F + ++ SL L+ HY L ++ + L+ PV
Sbjct: 75 PKFFLTDNL-VFDSLYDLITHYQQVPLR--CNEFEMRLSEPV 113
>pdb|2ECD|A Chain A, Solution Structure Of The Human Abl2 Sh2 Domain
Length = 119
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
+SR+ AE LLS +G+FL+R S + GQ ++S+ G H + T G + +
Sbjct: 23 VSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESR 82
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV H++ + D L TTL YP
Sbjct: 83 FSTLAELVHHHSTVA-----DGLVTTLHYP 107
>pdb|1AB2|A Chain A, Three-Dimensional Solution Structure Of The Src Homology 2
Domain Of C-Abl
Length = 109
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
+SR AE LLS +G+FL+R S + GQ ++S+ G H + G + +
Sbjct: 16 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR 75
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYPVFAPASGM 145
+ +L LV H++ + D L TTL YP AP G+
Sbjct: 76 FNTLAELVHHHSTVA-----DGLITTLHYP--APKRGI 106
>pdb|3K2M|A Chain A, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
pdb|3K2M|B Chain B, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
Length = 112
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
+SR AE LLS +G+FL+R S + GQ ++S+ G H + G + +
Sbjct: 12 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR 71
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV H++ + D L TTL YP
Sbjct: 72 FNTLAELVHHHSTVA-----DGLITTLHYP 96
>pdb|2ABL|A Chain A, Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine Kinase
Length = 163
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
+SR AE LLS +G+FL+R S + GQ ++S+ G H + G + +
Sbjct: 77 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR 136
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV H++ + D L TTL YP
Sbjct: 137 FNTLAELVHHHSTVA-----DGLITTLHYP 161
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
+SR AE LLS +G+FL+R S + GQ ++S+ G H + G + +
Sbjct: 151 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR 210
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV H++ + D L TTL YP
Sbjct: 211 FNTLAELVHHHSTVA-----DGLITTLHYP 235
>pdb|3EAC|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl-
Terminal Src Kinase), Oxidized Form
Length = 106
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
+++R QAE LL G FL+R ST G Y L + C G +H + E
Sbjct: 14 KITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSIDEEV- 72
Query: 107 IYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV HY +++ D L T L P
Sbjct: 73 YFENLMQLVEHYTSDA-----DGLCTRLIKP 98
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
+SR AE LLS +G+FL+R S + GQ ++S+ G H + G + +
Sbjct: 112 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR 171
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV H++ + D L TTL YP
Sbjct: 172 FNTLAELVHHHSTVA-----DGLITTLHYP 196
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
+SR AE LLS +G+FL+R S + GQ ++S+ G H + G + +
Sbjct: 109 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR 168
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV H++ + D L TTL YP
Sbjct: 169 FNTLAELVHHHSTVA-----DGLITTLHYP 193
>pdb|3T04|A Chain A, Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN COMPLEX
pdb|3UYO|A Chain A, Crystal Structure Of Monobody Sh13ABL1 SH2 DOMAIN COMPLEX
Length = 123
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
+SR AE LLS +G+FL+R S + GQ ++S+ G H + G + +
Sbjct: 23 VSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESR 82
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV H++ + D L TTL YP
Sbjct: 83 FNTLAELVHHHSTVA-----DGLITTLHYP 107
>pdb|2IZV|A Chain A, Crystal Structure Of Socs-4 In Complex With Elongin-B And
Elongin-C At 2.55a Resolution
Length = 187
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTTGQYALSIVCSGAPK--HCLVYETERGFGFA--EPF 105
M + AEALL G+P+GTFL+R S Y S+ + H + + F F +P
Sbjct: 41 MDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPC 100
Query: 106 NIY-PSLGALVLHY 118
+ P + L+ HY
Sbjct: 101 VFHSPDITGLLEHY 114
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
+++R QAE LL G FL+R ST G Y L + C G +H + E
Sbjct: 86 KITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEV- 144
Query: 107 IYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV HY ++ D L T L P
Sbjct: 145 YFENLMQLVEHYTTDA-----DGLCTRLIKP 170
>pdb|1JU5|A Chain A, Ternary Complex Of An Crk Sh2 Domain, Crk-Derived
Phophopeptide, And Abl Sh3 Domain By Nmr Spectroscopy
Length = 109
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLV 92
R+SR +A ALL G+ G FL+R S+T G Y LS+ + H ++
Sbjct: 6 RLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 51
>pdb|2EYY|A Chain A, Ct10-Regulated Kinase Isoform I
Length = 204
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLV 92
R+SR +A ALL G+ G FL+R S+T G Y LS+ + H ++
Sbjct: 17 RLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 62
>pdb|2DX0|A Chain A, Crystal Structure Of The N-Terminal Sh2 Domain Of Mouse
Phospholipase C-Gamma 2
pdb|2DX0|B Chain B, Crystal Structure Of The N-Terminal Sh2 Domain Of Mouse
Phospholipase C-Gamma 2
Length = 138
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 40 HHDEKTWLVRM--SRAQAEALL------SGRPDGTFLIRPSTT--GQYALSIVCSGAPKH 89
H EK W + SR AE LL +G DGTFL+R S T Y LS SG +H
Sbjct: 19 HFGEK-WFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQH 77
Query: 90 CLVYET-ERG-FGFAEPFNI-YPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
C + T E G + N+ + S+ AL+ HY L +L+ T P
Sbjct: 78 CRIRSTMENGVMKYYLTDNLTFNSIYALIQHYREAHLRCAEFELRLTDPVP 128
>pdb|2DLY|A Chain A, Solution Structure Of The Sh2 Domain Of Murine Fyn-Related
Kinase
Length = 121
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 48 VRMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPF 105
++ + A+ + L S G FLIR S + G ++LS++ G KH + + G F
Sbjct: 23 IKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRR 82
Query: 106 NIYPSLGALVLHYAANSLEEHNDDLKTTLAYP-----VFAPASG 144
++ +L V +Y S D L L P V P+SG
Sbjct: 83 KVFSTLNEFVNYYTTTS-----DGLCVKLEKPCLKIQVSGPSSG 121
>pdb|2DVJ|A Chain A, Phosphorylated Crk-Ii
Length = 230
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLV 92
R+SR +A ALL G+ G FL+R S+T G Y LS+ + H ++
Sbjct: 19 RLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 64
>pdb|2EYV|A Chain A, Sh2 Domain Of Ct10-Regulated Kinase
Length = 124
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLV 92
R+SR +A ALL G+ G FL+R S+T G Y LS+ + H ++
Sbjct: 16 RLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 61
>pdb|2VIF|A Chain A, Crystal Structure Of Socs6 Sh2 Domain In Complex With A
C-Kit Phosphopeptide
Length = 141
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTTGQY--ALSIVCSGAPKHCLVYETERGFGFAEPFNI 107
++R +AE L+ PDG+FL+R S+ +Y +LS G H + + F F E ++
Sbjct: 31 ITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDV 90
Query: 108 --YPSLGALVLHYAANS 122
+ S+ L+ H +S
Sbjct: 91 EGHTSIVDLIEHSIGDS 107
>pdb|2EYZ|A Chain A, Ct10-Regulated Kinase Isoform Ii
Length = 304
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLV 92
R+SR +A ALL G+ G FL+R S+T G Y LS+ + H ++
Sbjct: 17 RLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 62
>pdb|1AOT|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A
Phosphotyrosyl Peptide, Minimized Average Structure
pdb|1AOU|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A
Phosphotyrosyl Peptide, 22 Structures
Length = 106
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAE-ALLS-GRPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVY 93
E+ + ++ R AE LLS G P GTFLIR S T G Y+LSI + KH +
Sbjct: 5 EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIR 64
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + +L LV HY+ +
Sbjct: 65 KLDNGGYYITTRAQFETLQQLVQHYSERA 93
>pdb|1G83|A Chain A, Crystal Structure Of Fyn Sh3-Sh2
pdb|1G83|B Chain B, Crystal Structure Of Fyn Sh3-Sh2
Length = 165
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAE-ALLS-GRPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVY 93
E+ + ++ R AE LLS G P GTFLIR S T G Y+LSI + KH +
Sbjct: 66 EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIR 125
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + +L LV HY+ +
Sbjct: 126 KLDNGGYYITTRAQFETLQQLVQHYSERA 154
>pdb|3UF4|A Chain A, Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn Protein
(Proto- Concogene Tyrosine-Protein Kinase Fyn) From Mus
Musculus At 1.98 A Resolution
Length = 164
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 18 PDTSCPPMPSLSALNRTERDLPHHDEKTWLVRMSRAQAE-ALLS-GRPDGTFLIRPS--T 73
P P+ S+ A E+ + ++ R AE LLS G P GTFLIR S T
Sbjct: 54 PSNYVAPVDSIQA------------EEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETT 101
Query: 74 TGQYALSI-----VCSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANS 122
G Y+LSI KH + + + G + + +L LV HY+ +
Sbjct: 102 KGAYSLSIRDWDDXKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSEKA 155
>pdb|3TL0|A Chain A, Structure Of Shp2 N-Sh2 Domain In Complex With Rlnpyaqlwhr
Peptide
pdb|3TKZ|A Chain A, Structure Of The Shp-2 N-Sh2 Domain In A 1:2 Complex With
Rvipyfvplnr Peptide
Length = 109
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 40 HHDEKTWLV-RMSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAPKHCLVYET 95
H + W ++ +AE LL R DG+FL RPS + G + LS+ +GA H + T
Sbjct: 3 HMTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNT 62
Query: 96 ERGFGF--AEPFNIYPSLGALVLHYAAN--SLEEHNDDLKTTLAYPV 138
+ E F +L LV +Y + L+E N D+ L YP+
Sbjct: 63 GDYYDLYGGEKF---ATLAELVQYYMEHHGQLKEKNGDV-IELKYPL 105
>pdb|1GHU|A Chain A, Nmr Solution Structure Of Growth Factor Receptor-Bound
Protein 2 (Grb2) Sh2 Domain, 24 Structures
Length = 107
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 45 TWLV-RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG-- 98
+W ++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G
Sbjct: 2 SWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKY 61
Query: 99 FGFAEPFNIYPSLGALVLHYAANSL 123
F + FN SL LV ++ + S+
Sbjct: 62 FLWVVKFN---SLNELVDYHRSTSV 83
>pdb|4F59|A Chain A, Triple Mutant Src Sh2 Domain
pdb|4F5A|A Chain A, Triple Mutant Src Sh2 Domain Bound To Phosphate Ion
pdb|4F5B|A Chain A, Triple Mutant Src Sh2 Domain Bound To Phosphotyrosine
Length = 112
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPSTT--GQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL + P GTFL+R S T G YALS+ G KH L+
Sbjct: 9 EEWYFGKITRRESERLLLNAENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHYLIR 68
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 69 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 97
>pdb|1AYA|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYA|B Chain B, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYB|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYC|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYD|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
Length = 101
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 50 MSRAQAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
++ +AE LL R DG+FL RPS + G + LS+ +GA H + T + ++
Sbjct: 9 ITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNT------GDYYD 62
Query: 107 IY-----PSLGALVLHYAAN--SLEEHNDDLKTTLAYPV 138
+Y +L LV +Y + L+E N D+ L YP+
Sbjct: 63 LYGGEKFATLAELVQYYMEHHGQLKEKNGDV-IELKYPL 100
>pdb|3N84|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|D Chain D, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|E Chain E, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|F Chain F, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
Length = 112
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 13 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 72
Query: 104 PFNIYPSLGALVLHYAANSLEEHND----DLKTTLAYPVFAPA 142
FN SL LV ++ + S+ + D++ P + A
Sbjct: 73 KFN---SLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQA 112
>pdb|1BM2|A Chain A, Grb2-Sh2 Domain In Complex With
Cyclo-[n-Alpha-Acetyl-L-Thi
Alysyl-O-Phosphotyrosyl-Valyl-Asparagyl-Valyl-Prolyl]
(Pkf273-791)
Length = 117
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 46 WLV-RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--F 99
W ++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F
Sbjct: 14 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 73
Query: 100 GFAEPFNIYPSLGALVLHYAANSLEEHND----DLKTTLAYPVFAPA 142
+ FN SL LV ++ + S+ + D++ P + A
Sbjct: 74 LWVVKFN---SLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQA 117
>pdb|1GRI|A Chain A, Grb2
pdb|1GRI|B Chain B, Grb2
Length = 217
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 64 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 123
Query: 104 PFNIYPSLGALVLHYAANSL 123
FN SL LV ++ + S+
Sbjct: 124 KFN---SLNELVDYHRSTSV 140
>pdb|3OVE|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Pyxn- Derived Tripeptide
Length = 117
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 12 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 71
Query: 104 PFNIYPSLGALVLHYAANSLEEHND----DLKTTLAYPVFAPA 142
FN SL LV ++ + S+ + D++ P + A
Sbjct: 72 KFN---SLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQA 111
>pdb|3IMD|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IMD|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IMJ|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Cyclopropyl-Constrained Ac-Ptyr-Ile-Asn-Nh2 Tripeptide
Mimic
pdb|3IMJ|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Cyclopropyl-Constrained Ac-Ptyr-Ile-Asn-Nh2 Tripeptide
Mimic
pdb|3IN7|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Cyclopropyl-Constrained Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IN7|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Cyclopropyl-Constrained Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IN8|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Flexible Ac-Ptyr-Ile-Asn-Nh2 Tripeptide Mimic
pdb|3KFJ|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Flexible Ac-py-e-n-nh2 Tripeptide Mimic
pdb|3N8M|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
An Acyclic Ligand Having The Sequence Pyvnvp
pdb|3OV1|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Pyxn- Derived Tripeptide
pdb|3S8L|A Chain A, Protein-Ligand Interactions: Thermodynamic Effects
Associated With Increasing Hydrophobic Surface Area
pdb|3S8N|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Pyxn- Derived Tripeptide
pdb|3S8O|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
Pyxn- Derived Tripeptide
Length = 117
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 12 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 71
Query: 104 PFNIYPSLGALVLHYAANSLEEHND----DLKTTLAYPVFAPA 142
FN SL LV ++ + S+ + D++ P + A
Sbjct: 72 KFN---SLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQA 111
>pdb|1BMB|A Chain A, Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-974)
Length = 123
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 46 WLV-RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--F 99
W ++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F
Sbjct: 15 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 74
Query: 100 GFAEPFNIYPSLGALVLHYAANSL 123
+ FN SL LV ++ + S+
Sbjct: 75 LWVVKFN---SLNELVDYHRSTSV 95
>pdb|2AOA|A Chain A, Crystal Structures Of A High-affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOA|B Chain B, Crystal Structures Of A High-affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|A Chain A, Crystal Structures Of A High-Affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|B Chain B, Crystal Structures Of A High-Affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|C Chain C, Crystal Structures Of A High-Affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|D Chain D, Crystal Structures Of A High-Affinity Macrocyclic Peptide
Mimetic In Complex With The Grb2 Sh2 Domain
Length = 99
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 10 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 69
Query: 104 PFNIYPSLGALVLHYAANSL 123
FN SL LV ++ + S+
Sbjct: 70 KFN---SLNELVDYHRSTSV 86
>pdb|1ZFP|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
Complexed With A Phosphotyrosyl Pentapeptide
Length = 98
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 9 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 68
Query: 104 PFNIYPSLGALVLHYAANSL 123
FN SL LV ++ + S+
Sbjct: 69 KFN---SLNELVDYHRSTSV 85
>pdb|1TZE|E Chain E, Signal Transduction Adaptor Growth Factor, Grb2 Sh2 Domain
Complexed With Phosphotyrosyl Heptapeptide
Lys-Pro-Phe-Ptyr-Val-Asn-Val-Nh2 (Kfppyvnc-Nh2)
pdb|3N7Y|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
20-Membered Macrocyclic Ligand Having The Sequence Pyvnv
pdb|3N7Y|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
20-Membered Macrocyclic Ligand Having The Sequence Pyvnv
pdb|3N7Y|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With A
20-Membered Macrocyclic Ligand Having The Sequence Pyvnv
Length = 98
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 10 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 69
Query: 104 PFNIYPSLGALVLHYAANSL 123
FN SL LV ++ + S+
Sbjct: 70 KFN---SLNELVDYHRSTSV 86
>pdb|2H46|E Chain E, Native Domain-Swapped Dimer Crystal Structure Of The Grb2
Sh2 Domain
pdb|2H5K|A Chain A, Crystal Structure Of Complex Between The Domain-Swapped
Dimeric Grb2 Sh2 Domain And Shc-Derived Ligand,
Ac-Nh-Ptyr-Val-Asn-Nh2
pdb|2H5K|B Chain B, Crystal Structure Of Complex Between The Domain-Swapped
Dimeric Grb2 Sh2 Domain And Shc-Derived Ligand,
Ac-Nh-Ptyr-Val-Asn-Nh2
pdb|2HUW|A Chain A, X-Ray Crystal Structure Of The Grb2 Sh2 Domain Complexed
To A Constrained And Cyclopropane-Derived Ligand
pdb|2HUW|B Chain B, X-Ray Crystal Structure Of The Grb2 Sh2 Domain Complexed
To A Constrained And Cyclopropane-Derived Ligand
pdb|3C7I|A Chain A, X-Ray Crystal Structure Of The Complex Between The
Grb2-Sh2 Domain And A Flexible Ligand, Fptvn
Length = 116
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 12 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 71
Query: 104 PFNIYPSLGALVLHYAANSL 123
FN SL LV ++ + S+
Sbjct: 72 KFN---SLNELVDYHRSTSV 88
>pdb|1LCJ|A Chain A, Sh2 (Src Homology-2) Domain Of Human P56-Lck Tyrosine
Kinase Complexed With The 11 Residue Phosphotyrosyl
Peptide Epqpyeeipiyl
Length = 109
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G ++LS+ KH +
Sbjct: 10 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 69
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 70 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 106
>pdb|1FHS|A Chain A, The Three-Dimensional Solution Structure Of The Src
Homology Domain-2 Of The Growth Factor Receptor Bound
Protein-2, Nmr, 18 Structures
Length = 112
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 13 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 72
Query: 104 PFNIYPSLGALVLHYAANSLEEHND----DLKTTLAYPVFAPA 142
FN SL LV ++ + S+ + D++ P + A
Sbjct: 73 KFN---SLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQA 112
>pdb|1FYR|A Chain A, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|B Chain B, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|C Chain C, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|D Chain D, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
Length = 114
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 46 WLV-RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--F 99
W ++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F
Sbjct: 13 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 72
Query: 100 GFAEPFNIYPSLGALVLHYAANSL 123
+ FN SL LV ++ + S+
Sbjct: 73 LWVVKFN---SLNELVDYHRSTSV 93
>pdb|1CJ1|A Chain A, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|B Chain B, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|C Chain C, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|D Chain D, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|F Chain F, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|G Chain G, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|H Chain H, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|I Chain I, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|J Chain J, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|K Chain K, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|L Chain L, Growth Factor Receptor Binding Protein Sh2 Domain (Human)
Complexed With A Phosphotyrosyl Derivative
Length = 96
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 8 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 67
Query: 104 PFNIYPSLGALVLHYAANSL 123
FN SL LV ++ + S+
Sbjct: 68 KFN---SLNELVDYHRSTSV 84
>pdb|1BHF|A Chain A, P56lck Sh2 Domain Inhibitor Complex
pdb|1BHH|A Chain A, Free P56lck Sh2 Domain
Length = 108
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G ++LS+ KH +
Sbjct: 9 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 68
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 69 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 105
>pdb|3MXC|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes
Reveal A Conformational Switch And Their Functional
Implications.
pdb|3MXY|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes
Reveal A Conformational Switch And Their Functional
Implications
Length = 101
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 13 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 72
Query: 104 PFNIYPSLGALVLHYAANSL 123
FN SL LV ++ + S+
Sbjct: 73 KFN---SLNELVDYHRSTSV 89
>pdb|1LKL|A Chain A, Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex With
The Phosphotyrosyl Peptide Ac-Ptyr-Glu-Glu-Gly (Pyeeg
Peptide)
Length = 104
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G ++LS+ KH +
Sbjct: 5 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 64
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 65 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 101
>pdb|1BHH|B Chain B, Free P56lck Sh2 Domain
Length = 103
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G ++LS+ KH +
Sbjct: 4 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 63
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 64 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 100
>pdb|1X0N|A Chain A, Nmr Structure Of Growth Factor Receptor Binding Protein
Sh2 Domain Complexed With The Inhibitor
pdb|1QG1|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
Complexed With An Shc-Derived Peptide
Length = 104
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 9 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 68
Query: 104 PFNIYPSLGALVLHYAANSL 123
FN SL LV ++ + S+
Sbjct: 69 KFN---SLNELVDYHRSTSV 85
>pdb|1LKK|A Chain A, Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex With
The Phosphotyrosyl Peptide Ac-Ptyr-Glu-Glu-Ile (Pyeei
Peptide)
Length = 105
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G ++LS+ KH +
Sbjct: 6 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 66 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 102
>pdb|1LCK|A Chain A, Sh3-Sh2 Domain Fragment Of Human P56-Lck Tyrosine Kinase
Complexed With The 10 Residue Synthetic Phosphotyrosyl
Peptide Tegqpyqpqpa
Length = 175
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G ++LS+ KH +
Sbjct: 76 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 135
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 136 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 172
>pdb|1JYQ|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A Highly
Affine Phospho Peptide
pdb|1JYQ|B Chain B, Xray Structure Of Grb2 Sh2 Domain Complexed With A Highly
Affine Phospho Peptide
pdb|1JYR|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A
Phosphorylated Peptide
pdb|1JYU|A Chain A, Xray Structure Of Grb2 Sh2 Domain
Length = 96
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 49 RMSRAQAEALLSG-RPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERG--FGFAE 103
++ RA+AE +LS R DG FLIR S + G ++LS+ +H V G F +
Sbjct: 9 KIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVV 68
Query: 104 PFNIYPSLGALVLHYAANSL 123
FN SL LV ++ + S+
Sbjct: 69 KFN---SLNELVDYHRSTSV 85
>pdb|1X27|A Chain A, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|B Chain B, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|C Chain C, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|D Chain D, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|E Chain E, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|F Chain F, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
Length = 167
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G ++LS+ KH +
Sbjct: 68 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 127
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 128 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 164
>pdb|4D8K|A Chain A, Crystal Structure Of A Sh3-Sh2 Domains Of A
Lymphocyte-Specific Protein Tyrosine Kinase (Lck) From
Homo Sapiens At 2.36 A Resolution
Length = 175
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G ++LS+ KH +
Sbjct: 76 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 135
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 136 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 172
>pdb|1BLJ|A Chain A, Nmr Ensemble Of Blk Sh2 Domain, 20 Structures
pdb|1BLK|A Chain A, Nmr Ensemble Of Blk Sh2 Domain Using Chemical Shift
Refinement, 20 Structures
Length = 114
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 44 KTWLVR-MSRAQAEALLSG--RPDGTFLIRPSTTGQYALS-----IVCSG-APKHCLVYE 94
+ W R +SR AE L G+FLIR S + + A S I G KH +
Sbjct: 12 EKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRS 71
Query: 95 TERGFGFAEPFNIYPSLGALVLHYAAN 121
+ G + P +P+L ALV HY+
Sbjct: 72 LDNGGYYISPRITFPTLQALVQHYSKK 98
>pdb|3EAZ|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl-
Terminal Src Kinase), C122s Mutant
Length = 106
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Query: 49 RMSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFN 106
+++R QAE LL G FL+R ST G Y L + G +H + E
Sbjct: 14 KITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEV- 72
Query: 107 IYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ +L LV HY +++ D L T L P
Sbjct: 73 YFENLMQLVEHYTSDA-----DGLCTRLIKP 98
>pdb|1FBZ|A Chain A, Structure-Based Design Of A Novel, Osteoclast-Selective,
Nonpeptide Src Sh2 Inhibitor With In Vivo
Anti-Resorptive Activity
pdb|1FBZ|B Chain B, Structure-Based Design Of A Novel, Osteoclast-Selective,
Nonpeptide Src Sh2 Inhibitor With In Vivo
Anti-Resorptive Activity
Length = 104
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G + LS+ KH +
Sbjct: 5 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYKIRNL 64
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 65 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 101
>pdb|1IJR|A Chain A, Crystal Structure Of Lck Sh2 Complexed With Nonpeptide
Phosphotyrosine Mimetic
Length = 104
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYET 95
W + +SR AE L G G+FLIR S T G + LS+ KH +
Sbjct: 5 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYKIRNL 64
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYP 137
+ G + P +P L LV HY S D L T L+ P
Sbjct: 65 DNGGFYISPRITFPGLHELVRHYTNAS-----DGLCTRLSRP 101
>pdb|1CWD|L Chain L, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
pdb|1CWE|A Chain A, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
pdb|1CWE|C Chain C, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
Length = 98
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 45 TWLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSIV-----CSGAPKHCLVYE 94
+W + +SR AE L G G+FLIR S T G ++LS+ KH +
Sbjct: 2 SWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRN 61
Query: 95 TERGFGFAEPFNIYPSLGALVLHY 118
+ G + P +P L LV HY
Sbjct: 62 LDNGGFYISPRITFPGLHELVRHY 85
>pdb|3HCK|A Chain A, Nmr Ensemble Of The Uncomplexed Human Hck Sh2 Domain, 20
Structures
Length = 107
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 46 WLVR-MSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVYET 95
W + +SR AE L G G+F+IR S T G Y+LS+ KH +
Sbjct: 6 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 65
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFA 140
+ G + P + + +L LV HY ++ ND L L+ P +
Sbjct: 66 DNGGFYISPRSTFSTLQELVDHY-----KKGNDGLCQKLSVPCMS 105
>pdb|2EO3|A Chain A, Solution Structure Of The Sh2 Domain From Human Crk-Like
Protein
Length = 111
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 42 DEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLV 92
D W + +SR +A+ L G+ G FL+R S+T G Y LS+ + H ++
Sbjct: 17 DRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYII 70
>pdb|1BKM|A Chain A, Cocrystal Structure Of D-Amino Acid Substituted
Phosphopeptide Complex
Length = 113
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++EALL P GTFL+R S T G Y LS+ G KH +
Sbjct: 4 EEWYFGKITRRESEALLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 63
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 64 KLDSGGFYITSRTQFSSLQQLVAYYSKHA 92
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 32.7 bits (73), Expect = 0.077, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 54 QAEALLSGRP-DGTFLIRPSTT--GQYALSIVCSGAPKHCLVYETERGFGFAEPFNIY-- 108
+AE LL R DG+FL RPS + G LS+ +GA H + T + +++Y
Sbjct: 15 EAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNT------GDYYDLYGG 68
Query: 109 ---PSLGALVLHYAAN--SLEEHNDDLKTTLAYPV 138
+L LV +Y + L+E N D+ L YP+
Sbjct: 69 EKFATLAELVQYYMEHHGQLKEKNGDV-IELKYPL 102
>pdb|1Y1U|A Chain A, Structure Of Unphosphorylated Stat5a
pdb|1Y1U|B Chain B, Structure Of Unphosphorylated Stat5a
pdb|1Y1U|C Chain C, Structure Of Unphosphorylated Stat5a
Length = 585
Score = 32.7 bits (73), Expect = 0.079, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 39 PHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTT 74
PH ++ L +++ QA LL +PDGTFL+R S +
Sbjct: 460 PHWNDGAILGFVNKQQAHDLLINKPDGTFLLRFSDS 495
>pdb|3NHN|A Chain A, Crystal Structure Of The Src-Family Kinase Hck
Sh3-Sh2-Linker Regulatory Region
Length = 193
Score = 32.7 bits (73), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 44 KTWLVR-MSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVY 93
+ W + +SR AE L G G+F+IR S T G Y+LS+ KH +
Sbjct: 71 EEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIR 130
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFA 140
+ G + P + + +L LV HY ND L L+ P +
Sbjct: 131 TLDNGGFYISPRSTFSTLQELVDHYKKG-----NDGLCQKLSVPCMS 172
>pdb|2LQN|A Chain A, Solution Structure Of Crkl
Length = 303
Score = 32.3 bits (72), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 42 DEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLV 92
D W + +SR +A+ L G+ G FL+R S+T G Y LS+ + H ++
Sbjct: 10 DRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYII 63
>pdb|2LQW|A Chain A, Solution Structure Of Phosphorylated Crkl
Length = 303
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 42 DEKTWLVR-MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAPKHCLV 92
D W + +SR +A+ L G+ G FL+R S+T G Y LS+ + H ++
Sbjct: 10 DRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYII 63
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 46 WLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVYET 95
W + +SR AE L G G+F+IR S T G Y+LS+ KH +
Sbjct: 66 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 125
Query: 96 ERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFA 140
+ G + P + + +L LV HY ++ ND L L+ P +
Sbjct: 126 DNGGFYISPRSTFSTLQELVDHY-----KKGNDGLCQKLSVPCMS 165
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 44 KTWLVR-MSRAQAEA--LLSGRPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVY 93
+ W + +SR AE L G G+F+IR S T G Y+LS+ KH +
Sbjct: 70 EEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIR 129
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDLKTTLAYPVFA 140
+ G + P + + +L LV HY ++ ND L L+ P +
Sbjct: 130 TLDNGGFYISPRSTFSTLQELVDHY-----KKGNDGLCQKLSVPCMS 171
>pdb|1A1A|A Chain A, C-Src (Sh2 Domain With C188a Mutation) Complexed With
Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine)
pdb|1A1A|B Chain B, C-Src (Sh2 Domain With C188a Mutation) Complexed With
Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine)
Length = 107
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL + P GTFL+R S T G Y+LS+ G KH +
Sbjct: 7 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYSLSVSDFDNAKGLNVKHYKIR 66
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 67 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 95
>pdb|1BKL|A Chain A, Self-Associated Apo Src Sh2 Domain
Length = 113
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E+LL P GTFL+R S T G Y LS+ G KH +
Sbjct: 4 EEWYFGKITRRESESLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 63
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 64 KLDSGGFYITSRTQFSSLQQLVAYYSKHA 92
>pdb|1KC2|A Chain A, Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c8ala,
Aspcd2ala) Mutant Of The Src Sh2 Domain Bound To The
Pqpyeeipi Peptide
Length = 103
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIVCSGAPK-----HCLVY 93
E+ + +++R ++E LL P GTFL+R S T G Y LS+ K H +
Sbjct: 2 EEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSAFANAKGLNVAHYKIR 61
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANSLEEHNDDL 130
+ + G + + SL LV +Y+ +H D L
Sbjct: 62 KLDSGGFYITSRTQFSSLQQLVAYYS-----KHADGL 93
>pdb|1O4C|A Chain A, Crystal Structure Of Sh2 In Complex With Phosphate.
pdb|1O4F|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79073.
pdb|1O4G|A Chain A, Crystal Structure Of Sh2 In Complex With Dpi59
Length = 108
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL + P GTFL+R S T G Y LS+ G KH +
Sbjct: 5 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYXLSVSDFDNAKGLNVKHYKIR 64
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 65 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 93
>pdb|1SHD|A Chain A, Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein
Interactions
pdb|1HCT|B Chain B, Nmr Structure Of The Human Src Sh2 Domain Complex
pdb|1HCS|B Chain B, Nmr Structure Of The Human Src Sh2 Domain Complex
pdb|1A07|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Malonyl
Tyr-Glu-(N,N- Dipentyl Amine)
pdb|1A07|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Malonyl
Tyr-Glu-(N,N- Dipentyl Amine)
pdb|1A08|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Difluoro Phosphotyr-
Glu-(N,N-Dipentyl Amine)
pdb|1A08|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Difluoro Phosphotyr-
Glu-(N,N-Dipentyl Amine)
pdb|1A09|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Formyl
Phosphotyr-Glu- (N,N-Dipentyl Amine)
pdb|1A09|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Formyl
Phosphotyr-Glu- (N,N-Dipentyl Amine)
pdb|1A1B|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(N,N-
Dipentyl Amine)
pdb|1A1B|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(N,N-
Dipentyl Amine)
pdb|1A1C|A Chain A, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N-Me(- (Ch2)3-Cyclopentyl))
pdb|1A1C|B Chain B, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N-Me(- (Ch2)3-Cyclopentyl))
pdb|1A1E|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(3-
Butylpiperidine)
pdb|1A1E|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(3-
Butylpiperidine)
Length = 107
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL + P GTFL+R S T G Y LS+ G KH +
Sbjct: 7 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 66
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 67 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 95
>pdb|1O41|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78300.
pdb|1O42|A Chain A, Crystal Structure Of Sh2 In Complex With Ru81843.
pdb|1O43|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82129.
pdb|1O44|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85052
pdb|1O45|A Chain A, Crystal Structure Of Sh2 In Complex With Ru84687.
pdb|1O46|A Chain A, Crystal Structure Of Sh2 In Complex With Ru90395.
pdb|1O47|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82209.
pdb|1O48|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85053.
pdb|1O49|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85493.
pdb|1O4A|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82197.
pdb|1O4B|A Chain A, Crystal Structure Of Sh2 In Complex With Ru83876.
pdb|1O4D|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78262.
pdb|1O4E|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78299.
pdb|1O4H|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79072.
pdb|1O4I|A Chain A, Crystal Structure Of Sh2 In Complex With Pas219.
pdb|1O4J|A Chain A, Crystal Structure Of Sh2 In Complex With Iso24.
pdb|1O4K|A Chain A, Crystal Structure Of Sh2 In Complex With Pasbn.
pdb|1O4L|A Chain A, Crystal Structure Of Sh2 In Complex With Fragment2.
pdb|1O4M|A Chain A, Crystal Structure Of Sh2 In Complex With Malonicacid.
pdb|1O4N|A Chain A, Crystal Structure Of Sh2 In Complex With Oxalic Acid.
pdb|1O4O|A Chain A, Crystal Structure Of Sh2 In Complex With Phenylphosphate.
pdb|1O4P|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78791.
pdb|1O4Q|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79256.
pdb|1O4R|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78783
Length = 108
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL + P GTFL+R S T G Y LS+ G KH +
Sbjct: 5 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 64
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 65 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 93
>pdb|1IS0|A Chain A, Crystal Structure Of A Complex Of The Src Sh2 Domain With
Conformationally Constrained Peptide Inhibitor
pdb|1IS0|B Chain B, Crystal Structure Of A Complex Of The Src Sh2 Domain With
Conformationally Constrained Peptide Inhibitor
pdb|2JYQ|A Chain A, Nmr Structure Of The Apo V-Src Sh2 Domain
Length = 106
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL P GTFL+R S T G Y LS+ G KH +
Sbjct: 3 EEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 62
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 63 KLDSGGFYITSRTQFSSLQQLVAYYSKHA 91
>pdb|1SKJ|A Chain A, Cocrystal Structure Of Urea-Substituted Phosphopeptide
Complex
Length = 113
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL P GTFL+R S T G Y LS+ G KH +
Sbjct: 4 EEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 63
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 64 KLDSGGFYITSRTQFSSLQQLVAYYSKHA 92
>pdb|2CS0|A Chain A, Solution Structure Of The Sh2 Domain Of Human Hsh2d
Protein
Length = 119
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTTG-QYALSIVCSGAPKHCLVYETERG-FGFAEPFNI 107
+SR AE LL +P G+FLIR S + Y LS + H +V + G F
Sbjct: 23 ISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVA 82
Query: 108 YPSLGALVLHYAANSLEEHNDDLKTTLAYPVFAPASG 144
+ SL ALV + +E + L P+SG
Sbjct: 83 HTSLDALVTFHQQKPIEPRRELLTQPCRQKDSGPSSG 119
>pdb|1NZL|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyepyipi
pdb|1NZL|B Chain B, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyepyipi
pdb|1NZV|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyipyvpa
pdb|1NZV|B Chain B, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyipyvpa
Length = 103
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL P GTFL+R S T G Y LS+ G KH +
Sbjct: 2 EEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 61
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 62 KLDSGGFYITSRTQFSSLQQLVAYYSKHA 90
>pdb|1SHA|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition
Domain Sh2 Of V-Src Complexed With
Tyrosine-Phosphorylated Peptides
pdb|1SHB|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition
Domain Sh2 Of V-Src Complexed With
Tyrosine-Phosphorylated Peptides
pdb|1SPR|A Chain A, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|B Chain B, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|C Chain C, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|D Chain D, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|A Chain A, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|B Chain B, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|C Chain C, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
Length = 104
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL P GTFL+R S T G Y LS+ G KH +
Sbjct: 3 EEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 62
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 63 KLDSGGFYITSRTQFSSLQQLVAYYSKHA 91
>pdb|2KK6|A Chain A, Solution Structure Of Sh2 Domain Of Proto-Oncogene
Tyrosine- Protein Kinase Fer From Homo Sapiens,
Northeast Structural Genomics Consortium (Nesg) Target
Hr3461d
Length = 116
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 52 RAQAEALLSGRPDGTFLIRPS--TTGQYALSIVCSGAPKHCLVYETERGFGF 101
R +A+ LL + G FL+R S G+Y LS+ G +H ++ + + F
Sbjct: 26 RIEAQELL--KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRF 75
>pdb|1P13|A Chain A, Crystal Structure Of The Src Sh2 Domain Complexed With
Peptide (Sdpyanfk)
pdb|1P13|B Chain B, Crystal Structure Of The Src Sh2 Domain Complexed With
Peptide (Sdpyanfk)
Length = 102
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL P GTFL+R S T G Y LS+ G KH +
Sbjct: 2 EEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 61
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 62 KLDSGGFYITSRTQFSSLQQLVAYYSKHA 90
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL + P GTFL+R S T G Y LS+ G KH +
Sbjct: 65 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 124
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 125 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 153
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL + P GTFL+R S T G Y LS+ G KH +
Sbjct: 65 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 124
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 125 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 153
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL + P GTFL+R S T G Y LS+ G KH +
Sbjct: 65 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 124
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 125 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 153
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALL--SGRPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL + P GTFL+R S T G Y LS+ G KH +
Sbjct: 148 EEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 207
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 208 KLDSGGFYITSRTQFNSLQQLVAYYSKHA 236
>pdb|1F1W|A Chain A, Src Sh2 Thref1trp Mutant Complexed With The Phosphopeptide
S(Ptr)vnvqn
pdb|1F2F|A Chain A, Src Sh2 Thref1trp Mutant
Length = 104
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSIV----CSGAP-KHCLVY 93
E+ + +++R ++E LL P GTFL+R S T G Y LS+ G KH +
Sbjct: 3 EEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 62
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 63 KLDSGGFYIWSRTQFSSLQQLVAYYSKHA 91
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 43 EKTWLVRMSRAQAEALLSG--RPDGTFLIRPS--TTGQYALSI-----VCSGAPKHCLVY 93
E+ + +++R ++E LL P GTFL+R S T G Y LS+ KH +
Sbjct: 66 EEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIR 125
Query: 94 ETERGFGFAEPFNIYPSLGALVLHYAANS 122
+ + G + + SL LV +Y+ ++
Sbjct: 126 KLDSGGFYITSRTQFSSLQQLVAYYSKHA 154
>pdb|1WQU|A Chain A, Solution Structure Of The Human Fes Sh2 Domain
pdb|2DCR|A Chain A, Fully Automated Solution Structure Determination Of The
Fes Sh2 Domain
Length = 114
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 35 ERDLPHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQ-YALSIVCSGAPKHCLV 92
E P H++ + + RA+ LL G FL+R S Q Y LS++ G P+H ++
Sbjct: 8 EVQKPLHEQLWYHGAIPRAEVAELLV--HSGDFLVRESQGKQEYVLSVLWDGLPRHFII 64
>pdb|2CR4|A Chain A, Solution Structure Of The Sh2 Domain Of Human Sh3bp2
Protein
Length = 126
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 12 ASTSGGPDTSCPPMPSLSALNRTERDLPHHDEKTWLVRMSRAQAEALLSGRP-DGTFLIR 70
+S S G D P+P+ +N TE + R+ +A + G P DG + IR
Sbjct: 2 SSGSSGEDYEKVPLPNSVFVNTTE--------SCEVERLFKATSPR---GEPQDGLYCIR 50
Query: 71 PSTTGQYALSIV---CSGAPKHCLVYETERGFGFAEPFNIYPSLGALVLHYAANSLEEHN 127
S+T + +V S ++ ++E + F + E ++ S+G++V HY + L H
Sbjct: 51 NSSTKSGKVLVVWDETSNKVRNYRIFEKDSKF-YLEGEVLFVSVGSMVEHYHTHVLPSHQ 109
Query: 128 DDL 130
L
Sbjct: 110 SLL 112
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 39 PHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQ-YALSIVCSGAPKHCLV 92
P H++ + + RA+ LL G FL+R S Q Y LS++ G P+H ++
Sbjct: 9 PLHEQLWYHGAIPRAEVAELLVH--SGDFLVRESQGKQEYVLSVLWDGLPRHFII 61
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 39 PHHDEKTWLVRMSRAQAEALLSGRPDGTFLIRPSTTGQ-YALSIVCSGAPKHCLV 92
P H++ + + RA+ LL G FL+R S Q Y LS++ G P+H ++
Sbjct: 9 PLHEQLWYHGAIPRAEVAELLVH--SGDFLVRESQGKQEYVLSVLWDGLPRHFII 61
>pdb|3FCP|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|B Chain B, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|C Chain C, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|D Chain D, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|E Chain E, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|F Chain F, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|G Chain G, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|H Chain H, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
Length = 381
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 22 CPPMPSLSALNRTERDLPHHDEKTWLVRMSRAQAEALLSGRP-----DGTFLIRPSTTGQ 76
C + ++ ++ E+ + HD LVR+S+ A+L+ DG L + TG
Sbjct: 213 CRELAAMG-VDLIEQPVSAHDNAA-LVRLSQQIETAILADEAVATAYDGYQLAQQGFTGA 270
Query: 77 YALSIVCSGAPKHCL 91
YAL I +G P L
Sbjct: 271 YALKIAKAGGPNSVL 285
>pdb|2C9W|A Chain A, Crystal Structure Of Socs-2 In Complex With Elongin-B
And Elongin-C At 1.9a Resolution
Length = 169
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTTGQYALSI 81
M+ +A+ L P+GTFLIR S+ Y L+I
Sbjct: 24 MTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTI 55
>pdb|2L6K|A Chain A, Solution Structure Of A Nonphosphorylated Peptide
Recognizing Domain
Length = 123
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAP 87
+SR QA ALL + G FLIR S + G Y L++ + P
Sbjct: 12 LSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPP 51
>pdb|2KNO|A Chain A, Nmr Solution Structure Of Sh2 Domain Of The Human Tensin
Like C1 Domain Containing Phosphatase (Tenc1)
Length = 131
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTT--GQYALSIVCSGAP 87
+SR QA ALL + G FLIR S + G Y L++ + P
Sbjct: 27 LSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPP 66
>pdb|2HMH|A Chain A, Crystal Structure Of Socs3 In Complex With Gp130(Ptyr757)
Phosphopeptide
Length = 152
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Query: 53 AQAEALLSGRPDGTFLIRPSTTGQ--YALSIVCSGAPKHCLVYETERGFGF------AEP 104
+A LLS P GTFLIR S+ + + LS+ K+ + F +P
Sbjct: 44 GEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRSTQP 103
Query: 105 FNIYPSLGALVLHY 118
+ + LV HY
Sbjct: 104 VPRFDXVLKLVHHY 117
>pdb|1I3Z|A Chain A, Murine Eat2 Sh2 Domain In Complex With Slam Phosphopeptide
Length = 103
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 50 MSRAQAEALL-SGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETER---GFGFAE-- 103
+++ + EALL G DG FLIR S + AL + C K Y R G+ E
Sbjct: 10 LTKRECEALLLKGGVDGNFLIRDSESVPGALCL-CVSFKKLVYSYRIFREKHGYYRIETD 68
Query: 104 ---PFNIYPSLGALVLHYA 119
P I+P+L LV Y
Sbjct: 69 AHTPRTIFPNLQELVSKYG 87
>pdb|3CWG|A Chain A, Unphosphorylated Mouse Stat3 Core Fragment
pdb|3CWG|B Chain B, Unphosphorylated Mouse Stat3 Core Fragment
Length = 562
Score = 27.7 bits (60), Expect = 2.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTTGQ 76
+S+ + A+LS +P GTFL+R S + +
Sbjct: 463 ISKERERAILSTKPPGTFLLRFSESSK 489
>pdb|1BG1|A Chain A, Transcription Factor Stat3bDNA COMPLEX
Length = 596
Score = 27.7 bits (60), Expect = 2.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 50 MSRAQAEALLSGRPDGTFLIRPSTTGQ 76
+S+ + A+LS +P GTFL+R S + +
Sbjct: 463 ISKERERAILSTKPPGTFLLRFSESSK 489
>pdb|2OQ1|A Chain A, Tandem Sh2 Domains Of Zap-70 With 19-Mer Zeta1 Peptide
Length = 254
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 MSRAQAEA--LLSGRPDGTFLIRP--STTGQYALSIV 82
+SRA+AE L+G DG FL+R + G Y LS+V
Sbjct: 13 ISRAEAEEHLKLAGXADGLFLLRQCLRSLGGYVLSLV 49
>pdb|3R5Z|A Chain A, Structure Of A Deazaflavin-Dependent Reductase From
Nocardia Farcinica, With Co-Factor F420
pdb|3R5Z|B Chain B, Structure Of A Deazaflavin-Dependent Reductase From
Nocardia Farcinica, With Co-Factor F420
Length = 145
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 60 SGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVY 93
+G+ T L+R G+YA+ GAPKH + Y
Sbjct: 49 TGKLRKTPLMRVEHNGEYAVVASLGGAPKHPVWY 82
>pdb|1M61|A Chain A, Crystal Structure Of The Apo Sh2 Domains Of Zap-70
Length = 259
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 MSRAQAEA--LLSGRPDGTFLIRP--STTGQYALSIV 82
+SRA+AE L+G DG FL+R + G Y LS+V
Sbjct: 18 ISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLV 54
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 50 MSRAQAEA--LLSGRPDGTFLIRP--STTGQYALSIV 82
+SRA+AE L+G DG FL+R + G Y LS+V
Sbjct: 15 ISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLV 51
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 47 LVRMSRAQAEALL--SGRPDGTFLIRPSTTGQYALSIVCSGAPKHCLVYETERGFGFAEP 104
+ RM ++L+ +P+ + RP T Q+A+ I+ G K + ET++ + E
Sbjct: 110 ITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREH 169
Query: 105 FNIYPSLGALVLHYAANSLEEHNDDLK 131
++ + + ++ + DDL+
Sbjct: 170 KSLTGTARYMSINTHLGKEQSRRDDLE 196
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 26.6 bits (57), Expect = 6.1, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 109 PSLGALVLHYAANSLEEHNDDL 130
P+ A +LH AN+L+EH D+L
Sbjct: 47 PASRAEILHDIANALKEHEDEL 68
>pdb|2BBU|A Chain A, Solution Structure Of Mouse Socs3 In Complex With A
Phosphopeptide From The Gp130 Receptor
Length = 164
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 13/47 (27%)
Query: 53 AQAEALLSGRPDGTFLIRPST-------------TGQYALSIVCSGA 86
+A LLS P GTFLIR S+ +G L I C G
Sbjct: 33 GEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGG 79
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,572,972
Number of Sequences: 62578
Number of extensions: 174729
Number of successful extensions: 537
Number of sequences better than 100.0: 131
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 442
Number of HSP's gapped (non-prelim): 136
length of query: 148
length of database: 14,973,337
effective HSP length: 90
effective length of query: 58
effective length of database: 9,341,317
effective search space: 541796386
effective search space used: 541796386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)