Query psy8555
Match_columns 127
No_of_seqs 149 out of 161
Neff 4.8
Searched_HMMs 13730
Date Fri Aug 16 21:52:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8555.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8555hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1elwa_ a.118.8.1 (A:) Hop {Hu 79.8 1.7 0.00013 27.0 5.1 84 7-96 20-103 (117)
2 d1a17a_ a.118.8.1 (A:) Protein 79.2 2.3 0.00017 27.4 5.8 84 6-95 26-109 (159)
3 d2c2la1 a.118.8.1 (A:24-224) S 53.3 10 0.00075 24.0 4.7 85 6-96 20-104 (201)
4 d1xnfa_ a.118.8.1 (A:) Lipopro 51.7 15 0.0011 24.0 5.5 83 7-95 54-136 (259)
5 d1elra_ a.118.8.1 (A:) Hop {Hu 48.5 8.9 0.00065 23.8 3.6 87 6-95 20-110 (128)
6 d1hxia_ a.118.8.1 (A:) Peroxin 45.7 12 0.00085 22.7 3.8 76 9-90 35-110 (112)
7 d1fcha_ a.118.8.1 (A:) Peroxin 44.2 28 0.0021 23.4 6.1 85 7-97 36-120 (323)
8 d1w3ba_ a.118.8.1 (A:) O-GlcNA 41.9 22 0.0016 23.7 5.1 85 6-96 15-99 (388)
9 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 34.3 7.6 0.00056 22.9 1.4 38 57-95 4-42 (59)
10 d1w3ba_ a.118.8.1 (A:) O-GlcNA 33.2 27 0.002 23.2 4.4 28 11-38 258-285 (388)
11 d1zu2a1 a.118.8.1 (A:1-145) Mi 32.1 11 0.00079 24.1 2.0 36 3-38 10-45 (145)
12 d1mzba_ a.4.5.42 (A:) Ferric u 31.4 38 0.0028 21.4 4.8 41 69-115 19-61 (134)
13 d1fcha_ a.118.8.1 (A:) Peroxin 30.1 31 0.0023 23.1 4.3 84 9-98 191-274 (323)
14 d2c2la1 a.118.8.1 (A:24-224) S 22.3 35 0.0025 21.2 3.2 35 6-40 54-88 (201)
15 d1ks9a1 a.100.1.7 (A:168-291) 20.7 27 0.0019 21.8 2.3 49 47-122 76-124 (124)
No 1
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.77 E-value=1.7 Score=26.97 Aligned_cols=84 Identities=15% Similarity=-0.070 Sum_probs=63.4
Q ss_pred HHHHHHhhhhccCCccHHHHHHHHHHHhcCCCCCCCCCchhhhhHHHhhcCCCCchhHHHHHHHHHHHHhhcCcccHHHH
Q psy8555 7 NTLCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPARPAAPAGGLFGTEYDLNLSIDIDLNGSWTVVLQYLCLQNKVTANQT 86 (127)
Q Consensus 7 r~L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~pr~~np~~~m~g~~~~k~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~~ 86 (127)
..--+.|...|+.+|........+|..|+-...... --..+...+ +..|...+. ....++.. .++++...|...
T Consensus 20 ~eAi~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al-~~~p~~~~~-~~~~g~~~-~~~~~~~~A~~~ 93 (117)
T d1elwa_ 20 DDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQK---AYEDGCKTV-DLKPDWGKG-YSRKAAAL-EFLNRFEEAKRT 93 (117)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH---HHHHHHHHH-HHCTTCHHH-HHHHHHHH-HHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcchhhhhcccccccccccccc---cchhhhhHH-HhccchhhH-HHHHHHHH-HHccCHHHHHHH
Confidence 344578889999999999999999999996544432 122333334 345778887 88888865 999999999999
Q ss_pred HHHHHhhCCC
Q psy8555 87 FENYTTRHPN 96 (127)
Q Consensus 87 f~~y~~~hp~ 96 (127)
|....+.-|+
T Consensus 94 ~~~a~~~~p~ 103 (117)
T d1elwa_ 94 YEEGLKHEAN 103 (117)
T ss_dssp HHHHHTTCTT
T ss_pred HHHHHHhCCC
Confidence 9999987664
No 2
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.24 E-value=2.3 Score=27.35 Aligned_cols=84 Identities=14% Similarity=0.110 Sum_probs=65.8
Q ss_pred HHHHHHHhhhhccCCccHHHHHHHHHHHhcCCCCCCCCCchhhhhHHHhhcCCCCchhHHHHHHHHHHHHhhcCcccHHH
Q psy8555 6 FNTLCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPARPAAPAGGLFGTEYDLNLSIDIDLNGSWTVVLQYLCLQNKVTANQ 85 (127)
Q Consensus 6 Fr~L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~pr~~np~~~m~g~~~~k~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~ 85 (127)
|+.-.+.|...|+-+|...++...+|.+|+....... -...+-...+. .|.-.+. ..-.|+.. .-+|+...|..
T Consensus 26 y~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~---A~~~~~kal~~-~p~~~~a-~~~~g~~~-~~~g~~~eA~~ 99 (159)
T d1a17a_ 26 YENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGY---ALGDATRAIEL-DKKYIKG-YYRRAASN-MALGKFRAALR 99 (159)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHH-CTTCHHH-HHHHHHHH-HHTTCHHHHHH
T ss_pred HHHHHHHhhhccccchhhhhhhhhhHHHHHhccccch---HHHHHHHHHHH-cccchHH-HHHHHHHH-HHcCCHHHHHH
Confidence 4556688999999999999999999999999876532 23344444433 4777777 77778876 78999999999
Q ss_pred HHHHHHhhCC
Q psy8555 86 TFENYTTRHP 95 (127)
Q Consensus 86 ~f~~y~~~hp 95 (127)
.+....+..|
T Consensus 100 ~~~~a~~~~p 109 (159)
T d1a17a_ 100 DYETVVKVKP 109 (159)
T ss_dssp HHHHHHHHST
T ss_pred HHHHHHHcCC
Confidence 9999999876
No 3
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=53.27 E-value=10 Score=23.96 Aligned_cols=85 Identities=12% Similarity=0.091 Sum_probs=59.4
Q ss_pred HHHHHHHhhhhccCCccHHHHHHHHHHHhcCCCCCCCCCchhhhhHHHhhcCCCCchhHHHHHHHHHHHHhhcCcccHHH
Q psy8555 6 FNTLCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPARPAAPAGGLFGTEYDLNLSIDIDLNGSWTVVLQYLCLQNKVTANQ 85 (127)
Q Consensus 6 Fr~L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~pr~~np~~~m~g~~~~k~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~ 85 (127)
|..-.+.|...|+-+|....++-.+|..|+.+.....+ -..+....+ -.|.-.+- .+-.|.+. ..+++...|..
T Consensus 20 ~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~A---i~~~~~al~-l~p~~~~a-~~~lg~~~-~~l~~~~~A~~ 93 (201)
T d2c2la1 20 YPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQA---LADCRRALE-LDGQSVKA-HFFLGQCQ-LEMESYDEAIA 93 (201)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHH---HHHHHHHTT-SCTTCHHH-HHHHHHHH-HHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhh---hHHHHHHHH-hCCCcHHH-HHHHHHHH-HHCCCHHHHHH
Confidence 44556888889999999999999999999988765431 223333332 24555555 55455544 77899999999
Q ss_pred HHHHHHhhCCC
Q psy8555 86 TFENYTTRHPN 96 (127)
Q Consensus 86 ~f~~y~~~hp~ 96 (127)
.|....+..|.
T Consensus 94 ~~~~al~l~p~ 104 (201)
T d2c2la1 94 NLQRAYSLAKE 104 (201)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhCcc
Confidence 99988876653
No 4
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=51.73 E-value=15 Score=23.97 Aligned_cols=83 Identities=10% Similarity=0.038 Sum_probs=58.0
Q ss_pred HHHHHHhhhhccCCccHHHHHHHHHHHhcCCCCCCCCCchhhhhHHHhhcCCCCchhHHHHHHHHHHHHhhcCcccHHHH
Q psy8555 7 NTLCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPARPAAPAGGLFGTEYDLNLSIDIDLNGSWTVVLQYLCLQNKVTANQT 86 (127)
Q Consensus 7 r~L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~pr~~np~~~m~g~~~~k~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~~ 86 (127)
..-.+.|...|+-+|...+.+..+|..|........ --..|-...+. .|...+. ..-.+.. +..+++...|...
T Consensus 54 ~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~---A~~~~~~al~~-~p~~~~a-~~~lg~~-~~~~g~~~~A~~~ 127 (259)
T d1xnfa_ 54 ALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDA---AYEAFDSVLEL-DPTYNYA-HLNRGIA-LYYGGRDKLAQDD 127 (259)
T ss_dssp HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHH-CTTCTHH-HHHHHHH-HHHTTCHHHHHHH
T ss_pred HHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHH---hhhhhhHHHHH-Hhhhhhh-HHHHHHH-HHHHhhHHHHHHH
Confidence 344577888898899999999999999987765432 12344444433 3555555 5555544 4678999999999
Q ss_pred HHHHHhhCC
Q psy8555 87 FENYTTRHP 95 (127)
Q Consensus 87 f~~y~~~hp 95 (127)
|....+..|
T Consensus 128 ~~~al~~~p 136 (259)
T d1xnfa_ 128 LLAFYQDDP 136 (259)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHhhcc
Confidence 999988765
No 5
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.53 E-value=8.9 Score=23.77 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=55.3
Q ss_pred HHHHHHHhhhhccCCccHHHHHHHHHHHhcCCCCCCCCCchhhhhHHHhhcCCCCchhHHHHHHH----HHHHHhhcCcc
Q psy8555 6 FNTLCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPARPAAPAGGLFGTEYDLNLSIDIDLNGSWTV----VLQYLCLQNKV 81 (127)
Q Consensus 6 Fr~L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~pr~~np~~~m~g~~~~k~~~~E~Dl~~IaqA----VLQ~Lcl~n~~ 81 (127)
|..-.+.|..+|+.+|.....+..+|..|+.......+-..-.-...+-.+.. +... -++++ -..+.++++..
T Consensus 20 y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~--~~~~-~~a~~~~~lg~~~~~~~~~~ 96 (128)
T d1elra_ 20 FDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR--EDYR-QIAKAYARIGNSYFKEEKYK 96 (128)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST--TCHH-HHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccH--HHHH-HHHHHHHHHHHHHHHhCCHH
Confidence 44556889999999999999999999999988755432111111112222211 1122 23332 23457889999
Q ss_pred cHHHHHHHHHhhCC
Q psy8555 82 TANQTFENYTTRHP 95 (127)
Q Consensus 82 ~A~~~f~~y~~~hp 95 (127)
.|...|......++
T Consensus 97 ~A~~~~~kal~~~~ 110 (128)
T d1elra_ 97 DAIHFYNKSLAEHR 110 (128)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999998877664
No 6
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=45.66 E-value=12 Score=22.65 Aligned_cols=76 Identities=12% Similarity=0.052 Sum_probs=50.2
Q ss_pred HHHHhhhhccCCccHHHHHHHHHHHhcCCCCCCCCCchhhhhHHHhhcCCCCchhHHHHHHHHHHHHhhcCcccHHHHHH
Q psy8555 9 LCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPARPAAPAGGLFGTEYDLNLSIDIDLNGSWTVVLQYLCLQNKVTANQTFE 88 (127)
Q Consensus 9 L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~pr~~np~~~m~g~~~~k~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~~f~ 88 (127)
-...|...++.+|...+.+-.+|.+|+.+.....+ -..+...... .|...+. .+..|+.. .-.|+...|...++
T Consensus 35 A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A---~~~~~~al~~-~p~~~~a-~~~la~~y-~~~g~~~~A~~~l~ 108 (112)
T d1hxia_ 35 AALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLA---IIALNHARML-DPKDIAV-HAALAVSH-TNEHNANAALASLR 108 (112)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHH---HHHHHHHHHH-CTTCHHH-HHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHhhhcccccccchhhhhhhhhhhhhhhHHHh---hccccccccc-ccccccc-hHHHHHHH-HHCCCHHHHHHHHH
Confidence 44667777777888888888888888877765432 2334433333 4666676 67767665 56677778877777
Q ss_pred HH
Q psy8555 89 NY 90 (127)
Q Consensus 89 ~y 90 (127)
++
T Consensus 109 ~~ 110 (112)
T d1hxia_ 109 AW 110 (112)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 7
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.21 E-value=28 Score=23.39 Aligned_cols=85 Identities=9% Similarity=0.037 Sum_probs=60.0
Q ss_pred HHHHHHhhhhccCCccHHHHHHHHHHHhcCCCCCCCCCchhhhhHHHhhcCCCCchhHHHHHHHHHHHHhhcCcccHHHH
Q psy8555 7 NTLCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPARPAAPAGGLFGTEYDLNLSIDIDLNGSWTVVLQYLCLQNKVTANQT 86 (127)
Q Consensus 7 r~L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~pr~~np~~~m~g~~~~k~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~~ 86 (127)
..-.+.|...|+.+|...+++..+|.+|+....... --..+....+. .|...+. ....|.. +.-+++...|...
T Consensus 36 ~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~---A~~~~~~al~~-~p~~~~~-~~~la~~-~~~~~~~~~A~~~ 109 (323)
T d1fcha_ 36 PNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELL---AISALRRCLEL-KPDNQTA-LMALAVS-FTNESLQRQACEI 109 (323)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHH-CTTCHHH-HHHHHHH-HHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHH---HHHHHHhhhcc-ccccccc-ccccccc-ccccccccccccc
Confidence 345578889999999999999999999997654432 12333333333 3555555 4444443 4778999999999
Q ss_pred HHHHHhhCCCC
Q psy8555 87 FENYTTRHPNI 97 (127)
Q Consensus 87 f~~y~~~hp~i 97 (127)
+....+.+|+.
T Consensus 110 ~~~~~~~~~~~ 120 (323)
T d1fcha_ 110 LRDWLRYTPAY 120 (323)
T ss_dssp HHHHHHTSTTT
T ss_pred hhhHHHhccch
Confidence 99999888754
No 8
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.94 E-value=22 Score=23.68 Aligned_cols=85 Identities=11% Similarity=0.058 Sum_probs=57.5
Q ss_pred HHHHHHHhhhhccCCccHHHHHHHHHHHhcCCCCCCCCCchhhhhHHHhhcCCCCchhHHHHHHHHHHHHhhcCcccHHH
Q psy8555 6 FNTLCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPARPAAPAGGLFGTEYDLNLSIDIDLNGSWTVVLQYLCLQNKVTANQ 85 (127)
Q Consensus 6 Fr~L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~pr~~np~~~m~g~~~~k~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~ 85 (127)
|..-.+.|...++.+|.-.+.+-.+|.+|+....... --..+-...+. .|.-.+. ....|.+ +..+++...|..
T Consensus 15 ~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~---A~~~~~~al~~-~p~~~~a-~~~l~~~-~~~~g~~~~A~~ 88 (388)
T d1w3ba_ 15 FEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDR---SAHFSTLAIKQ-NPLLAEA-YSNLGNV-YKERGQLQEAIE 88 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHH-CTTCHHH-HHHHHHH-HHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHh-CCCCHHH-HHHHHHH-hhhhcccccccc
Confidence 3445577888888899989999999999997654322 12233333333 4555555 4444443 467899999999
Q ss_pred HHHHHHhhCCC
Q psy8555 86 TFENYTTRHPN 96 (127)
Q Consensus 86 ~f~~y~~~hp~ 96 (127)
.+....+..+.
T Consensus 89 ~~~~~~~~~~~ 99 (388)
T d1w3ba_ 89 HYRHALRLKPD 99 (388)
T ss_dssp HHHHHHHHCTT
T ss_pred ccccccccccc
Confidence 99999887653
No 9
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.25 E-value=7.6 Score=22.86 Aligned_cols=38 Identities=16% Similarity=0.082 Sum_probs=31.8
Q ss_pred CCCCchhHHHHHHHHHHHHhhcCcccHHHHHHHHHh-hCC
Q psy8555 57 NLSIDIDLNGSWTVVLQYLCLQNKVTANQTFENYTT-RHP 95 (127)
Q Consensus 57 ~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~~f~~y~~-~hp 95 (127)
-+..|.|- +|.+-|..+-+.+.....|.++.++.+ ++|
T Consensus 4 ~fT~eeD~-~l~~yv~~~~~~~~~~~Gn~iwk~l~~~~~~ 42 (59)
T d1fexa_ 4 AFTDADDV-AILTYVKENARSPSSVTGNALWKAMEKSSLT 42 (59)
T ss_dssp CCCHHHHH-HHHHHHHHTCCSTTTTTSSHHHHHHHHSCSS
T ss_pred CCCHHHHH-HHHHHHHHhccCcCCccHHHHHHHHHHhcCC
Confidence 36778999 999999998888788889999999985 454
No 10
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.24 E-value=27 Score=23.18 Aligned_cols=28 Identities=14% Similarity=0.326 Sum_probs=16.9
Q ss_pred HHhhhhccCCccHHHHHHHHHHHhcCCC
Q psy8555 11 QQYQTSIKRDPAYSDYLNKIGHIFFGIQ 38 (127)
Q Consensus 11 ~~Y~~sl~rd~~~~~~L~~IGe~yFgI~ 38 (127)
+.|...++-+|...+.+-.+|..|+...
T Consensus 258 ~~~~~al~~~p~~~~~~~~l~~~~~~~~ 285 (388)
T d1w3ba_ 258 DTYRRAIELQPHFPDAYCNLANALKEKG 285 (388)
T ss_dssp HHHHHHHHTCSSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 4555556666666666666666666543
No 11
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=32.11 E-value=11 Score=24.11 Aligned_cols=36 Identities=19% Similarity=0.458 Sum_probs=32.1
Q ss_pred chHHHHHHHHhhhhccCCccHHHHHHHHHHHhcCCC
Q psy8555 3 LVAFNTLCQQYQTSIKRDPAYSDYLNKIGHIFFGIQ 38 (127)
Q Consensus 3 ~~lFr~L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~ 38 (127)
...|..-.+.|+..++.||...+++-..|.+|+...
T Consensus 10 ~~~fe~A~~~~e~al~~~P~~~~~~~~~g~~l~~~~ 45 (145)
T d1zu2a1 10 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELS 45 (145)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HccHHHHHHHHHHHHhhCCcchHHHHHHHHHHHHhh
Confidence 456888899999999999999999999999998764
No 12
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.41 E-value=38 Score=21.37 Aligned_cols=41 Identities=10% Similarity=0.166 Sum_probs=30.1
Q ss_pred HHHHHHHhhc--CcccHHHHHHHHHhhCCCCCCCCCCCCcchHHHHHHH
Q psy8555 69 TVVLQYLCLQ--NKVTANQTFENYTTRHPNIQTRGPPYYLPLLNFIWFL 115 (127)
Q Consensus 69 qAVLQ~Lcl~--n~~~A~~~f~~y~~~hp~i~~~~~p~~~PLLnF~~fL 115 (127)
++||.+|-.. ...+|..+++...++-|+++. .=+-+.+..|
T Consensus 19 ~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i~~------aTVYR~L~~l 61 (134)
T d1mzba_ 19 VKILQMLDSAEQRHMSAEDVYKALMEAGEDVGL------ATVYRVLTQF 61 (134)
T ss_dssp HHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCH------HHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHhCCCccH------HHHHHHHHHH
Confidence 5899999643 468999999999998887765 3455555533
No 13
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.07 E-value=31 Score=23.15 Aligned_cols=84 Identities=11% Similarity=0.012 Sum_probs=55.7
Q ss_pred HHHHhhhhccCCccHHHHHHHHHHHhcCCCCCCCCCchhhhhHHHhhcCCCCchhHHHHHHHHHHHHhhcCcccHHHHHH
Q psy8555 9 LCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPARPAAPAGGLFGTEYDLNLSIDIDLNGSWTVVLQYLCLQNKVTANQTFE 88 (127)
Q Consensus 9 L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~pr~~np~~~m~g~~~~k~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~~f~ 88 (127)
-.+.|...++.+|...+.+-.+|..|+....... .-..+....+ ..|...+. ...-++.. ..+|+...|...|.
T Consensus 191 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~---A~~~~~~al~-~~p~~~~a-~~~lg~~~-~~~g~~~~A~~~~~ 264 (323)
T d1fcha_ 191 AVDCFTAALSVRPNDYLLWNKLGATLANGNQSEE---AVAAYRRALE-LQPGYIRS-RYNLGISC-INLGAHREAVEHFL 264 (323)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH---HHHHHHHHHH-HCTTCHHH-HHHHHHHH-HHHTCHHHHHHHHH
T ss_pred hhcccccccccccccccchhhhhhcccccccchh---HHHHHHHHHH-HhhccHHH-HHHHHHHH-HHCCCHHHHHHHHH
Confidence 3456677777788888888888888887654322 1223333332 24666665 55555554 67899999999999
Q ss_pred HHHhhCCCCC
Q psy8555 89 NYTTRHPNIQ 98 (127)
Q Consensus 89 ~y~~~hp~i~ 98 (127)
+..+..|.-.
T Consensus 265 ~al~l~p~~~ 274 (323)
T d1fcha_ 265 EALNMQRKSR 274 (323)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHhCCcCh
Confidence 9998877543
No 14
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.35 E-value=35 Score=21.21 Aligned_cols=35 Identities=6% Similarity=-0.004 Sum_probs=29.5
Q ss_pred HHHHHHHhhhhccCCccHHHHHHHHHHHhcCCCCC
Q psy8555 6 FNTLCQQYQTSIKRDPAYSDYLNKIGHIFFGIQPA 40 (127)
Q Consensus 6 Fr~L~~~Y~~sl~rd~~~~~~L~~IGe~yFgI~~p 40 (127)
|..-.+.|...|+-+|.+.+++-.+|.+|+.....
T Consensus 54 ~~~Ai~~~~~al~l~p~~~~a~~~lg~~~~~l~~~ 88 (201)
T d2c2la1 54 PEQALADCRRALELDGQSVKAHFFLGQCQLEMESY 88 (201)
T ss_dssp HHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCH
T ss_pred hhhhhHHHHHHHHhCCCcHHHHHHHHHHHHHCCCH
Confidence 34455788999999999999999999999988764
No 15
>d1ks9a1 a.100.1.7 (A:168-291) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}
Probab=20.71 E-value=27 Score=21.84 Aligned_cols=49 Identities=16% Similarity=0.158 Sum_probs=33.1
Q ss_pred hhhhHHHhhcCCCCchhHHHHHHHHHHHHhhcCcccHHHHHHHHHhhCCCCCCCCCCCCcchHHHHHHHHHhhccc
Q psy8555 47 GGLFGTEYDLNLSIDIDLNGSWTVVLQYLCLQNKVTANQTFENYTTRHPNIQTRGPPYYLPLLNFIWFLLKVIETY 122 (127)
Q Consensus 47 ~~m~g~~~~k~~~~E~Dl~~IaqAVLQ~Lcl~n~~~A~~~f~~y~~~hp~i~~~~~p~~~PLLnF~~fLl~tie~~ 122 (127)
+||+-++- ++.+.|+|- |.-+|.+ .-++| |-| +|.+.+++-+++.+|.+
T Consensus 76 sSM~qD~~-~gr~tEid~--i~G~vv~----------------~a~~~------gi~--tP~~~~l~~lik~~E~~ 124 (124)
T d1ks9a1 76 SSMLQDIR-ALRHTEIDY--INGFLLR----------------RARAH------GIA--VPENTRLFEMVKRKESE 124 (124)
T ss_dssp CHHHHHHH-TTCCCSGGG--THHHHHH----------------HHHHH------TCC--CHHHHHHHHHHHHHHHC
T ss_pred ChHHHHHH-cCCcchHHH--HHHHHHH----------------HHHHh------CCC--CcHHHHHHHHHHHHhcC
Confidence 58999955 779999998 4455544 12222 222 78888888888888753
Done!