RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8555
         (127 letters)



>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
           (mkp3) [TaxId: 9606]}
          Length = 144

 Score = 27.1 bits (59), Expect = 0.41
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 8/54 (14%)

Query: 64  LNGSWTVVLQYLCLQNKVTANQTFENYTTRHPNIQTRGPPYYLPLLNFIWFLLK 117
           ++ S TV + YL  +  ++ N  ++    +  NI         P  NF+  LL 
Sbjct: 94  ISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNIS--------PNFNFMGQLLD 139


>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
           [TaxId: 9606]}
          Length = 145

 Score = 26.2 bits (57), Expect = 0.82
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 8/54 (14%)

Query: 64  LNGSWTVVLQYLCLQNKVTANQTFENYTTRHPNIQTRGPPYYLPLLNFIWFLLK 117
           ++ S T+ L YL    +V  ++ F+    R   I         P  +F+  LL+
Sbjct: 92  ISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVIS--------PNFSFMGQLLQ 137


>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 178

 Score = 24.0 bits (51), Expect = 5.9
 Identities = 6/32 (18%), Positives = 12/32 (37%)

Query: 64  LNGSWTVVLQYLCLQNKVTANQTFENYTTRHP 95
            + S T+V+ YL ++ K+              
Sbjct: 121 YSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE 152


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.140    0.440 

Gapped
Lambda     K      H
   0.267   0.0504    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 477,837
Number of extensions: 19855
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 6
Length of query: 127
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 52
Effective length of database: 1,377,846
Effective search space: 71647992
Effective search space used: 71647992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (22.8 bits)