BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8560
(205 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4G921|RL25_HERAR 50S ribosomal protein L25 OS=Herminiimonas arsenicoxydans GN=rplY
PE=3 SV=1
Length = 210
Score = 264 bits (675), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF R GT SR R G PGI+YGG PV IS++HN +YHALKKE FHSSIL
Sbjct: 1 MKVIAFARNDLGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GKVE VLLR+FQ+HAYK+LVLHADFQRVD ++KIHVKVPLHFIN+EISPAVKL +
Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFINAEISPAVKLQA 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG-VSVIHSTEEDPTI 179
IIS+V ++L I+CLP NLP+F+E++L +EV SIHL+DIKLP+G V+VIH E++PTI
Sbjct: 121 GIISHVATELDITCLPGNLPEFVEVDLATLEVGHSIHLADIKLPKGVVAVIHGGEDNPTI 180
Query: 180 ATAIIPVNTLE 190
ATA +P +E
Sbjct: 181 ATAAVPAGKVE 191
>sp|A6T2S2|RL25_JANMA 50S ribosomal protein L25 OS=Janthinobacterium sp. (strain
Marseille) GN=rplY PE=3 SV=1
Length = 214
Score = 262 bits (669), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 122/191 (63%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF RK+ GT SR R G PGI+YGG PV IS++HN +YHALKKE FHSSIL
Sbjct: 1 MKVIAFARKELGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GKVE VLLR+FQ+HAYK+LVLHADFQRVD ++KIHVKVPLHF+N+E SPAVKL+
Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFVNAETSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
IIS+V S+L I+CLP +LP+F+E++L ++V SIHL+DIKLP+GV +VIH E++PTI
Sbjct: 121 GIISHVASELDITCLPSDLPEFVEVDLANLDVGHSIHLADIKLPKGVAAVIHGGEDNPTI 180
Query: 180 ATAIIPVNTLE 190
ATA +P +E
Sbjct: 181 ATASVPAGKVE 191
>sp|Q1LRQ2|RL25_RALME 50S ribosomal protein L25 OS=Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839) GN=rplY PE=3 SV=1
Length = 203
Score = 241 bits (615), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 144/199 (72%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK E LLR FQ+H +K LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSATEKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I+S++++DL +SCLP +LP+FIE++L E+N +IHLSD+KLP+GV+ I +E+P IA
Sbjct: 121 GIVSHILNDLEVSCLPADLPEFIEVDLAAAELNQTIHLSDLKLPKGVTAITHGDENPAIA 180
Query: 181 TAIIPVNTLESDNNSSIEK 199
+ +P S+ E+
Sbjct: 181 SITLPAGAQSSEAAEGGEE 199
>sp|A0KAM6|RL25_BURCH 50S ribosomal protein L25 OS=Burkholderia cenocepacia (strain
HI2424) GN=rplY PE=3 SV=1
Length = 201
Score = 239 bits (611), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H K PLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ I CLP +LP+F+E++L K+E S+H DI LP+GV+++ H E+P I
Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAENPVI 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>sp|B1JYQ0|RL25_BURCC 50S ribosomal protein L25 OS=Burkholderia cenocepacia (strain
MC0-3) GN=rplY PE=3 SV=1
Length = 201
Score = 239 bits (611), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H K PLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ I CLP +LP+F+E++L K+E S+H DI LP+GV+++ H E+P I
Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAENPVI 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>sp|Q1BTG5|RL25_BURCA 50S ribosomal protein L25 OS=Burkholderia cenocepacia (strain AU
1054) GN=rplY PE=3 SV=1
Length = 201
Score = 239 bits (611), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H K PLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ I CLP +LP+F+E++L K+E S+H DI LP+GV+++ H E+P I
Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAENPVI 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>sp|Q0BBQ4|RL25_BURCM 50S ribosomal protein L25 OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=rplY PE=3 SV=1
Length = 202
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V +++ I CLP LP+F+E++L K+E S+H DI LP+GV+++ H E+P +
Sbjct: 121 AVVSHVATEIEIECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHIDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A IP +
Sbjct: 181 ASATIPAGAV 190
>sp|B1YN53|RL25_BURA4 50S ribosomal protein L25 OS=Burkholderia ambifaria (strain MC40-6)
GN=rplY PE=3 SV=1
Length = 202
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V +++ I CLP LP+F+E++L K+E S+H DI LP+GV+++ H E+P +
Sbjct: 121 AVVSHVATEIEIECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHIDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A IP +
Sbjct: 181 ASATIPAGAV 190
>sp|A9AEY7|RL25_BURM1 50S ribosomal protein L25 OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=rplY PE=3 SV=1
Length = 201
Score = 237 bits (605), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFERK++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ + CLP LP+F+E++L K+E SIH DI LP+GV++ H E+P I
Sbjct: 121 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPKGVALTAHVDAENPVI 180
Query: 180 ATAIIPVNTL 189
A+A IP +
Sbjct: 181 ASATIPAGAV 190
>sp|Q39CT9|RL25_BURS3 50S ribosomal protein L25 OS=Burkholderia sp. (strain 383) GN=rplY
PE=3 SV=1
Length = 201
Score = 237 bits (604), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H K PLHF+N+EISPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEISPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ I CLP +LP+F+E++L K+E S+H DI LP+GV ++ H E+P +
Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDITLPKGVVLVAHVDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>sp|A4JHZ6|RL25_BURVG 50S ribosomal protein L25 OS=Burkholderia vietnamiensis (strain G4
/ LMG 22486) GN=rplY PE=3 SV=1
Length = 201
Score = 237 bits (604), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FH+SIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEIAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ + CLP LP+F+E++L K+E S+H DI LP GV+++ H E+P +
Sbjct: 121 AIVSHVTTEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPNGVALVAHVDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>sp|A1UZN7|RL25_BURMS 50S ribosomal protein L25 OS=Burkholderia mallei (strain SAVP1)
GN=rplY PE=3 SV=1
Length = 204
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 181 ASATIPAGAV-SDEAAAGEGE 200
>sp|Q62FC2|RL25_BURMA 50S ribosomal protein L25 OS=Burkholderia mallei (strain ATCC
23344) GN=rplY PE=3 SV=1
Length = 204
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 181 ASATIPAGAV-SDEAAAGEGE 200
>sp|A3MQB4|RL25_BURM7 50S ribosomal protein L25 OS=Burkholderia mallei (strain NCTC
10247) GN=rplY PE=3 SV=1
Length = 204
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 181 ASATIPAGAV-SDEAAAGEGE 200
>sp|Q63XL9|RL25_BURPS 50S ribosomal protein L25 OS=Burkholderia pseudomallei (strain
K96243) GN=rplY PE=3 SV=1
Length = 208
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 65 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 125 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 184
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 185 ASATIPAGAV-SDEAAAGEGE 204
>sp|Q3JW87|RL25_BURP1 50S ribosomal protein L25 OS=Burkholderia pseudomallei (strain
1710b) GN=rplY PE=3 SV=2
Length = 208
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 65 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 125 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 184
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 185 ASATIPAGAV-SDEAAAGEGE 204
>sp|A3N5K0|RL25_BURP6 50S ribosomal protein L25 OS=Burkholderia pseudomallei (strain 668)
GN=rplY PE=3 SV=1
Length = 204
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEVAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 181 ASATIPAGAV-SDEAAAGEGE 200
>sp|Q476G0|RL25_CUPPJ 50S ribosomal protein L25 OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=rplY PE=3 SV=1
Length = 203
Score = 234 bits (596), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 140/185 (75%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG DP I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAADPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK E LLR FQ+H +K LVLH DFQRV KIHVKVPLHF+N E +P VKL
Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++++++DL +SCLP +LP+FIE+++ MEV ++HL+D+KLP+GV+V+ +E+P IA
Sbjct: 121 GLVNHIVNDLEVSCLPADLPEFIEVDVGNMEVGQTLHLTDLKLPKGVTVVTHGDENPAIA 180
Query: 181 TAIIP 185
+ +P
Sbjct: 181 SISLP 185
>sp|Q0KEP9|RL25_CUPNH 50S ribosomal protein L25 OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=rplY PE=3 SV=1
Length = 205
Score = 233 bits (595), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 140/189 (74%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LE+ GK E LLR FQ+H +K LVLH DFQRV KIHVKVPLHF+N E +P VKL
Sbjct: 61 ELEVAGKSEQALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I++++++DL +SCLP +LP+FIE++L +E+N ++HLSDIKLP+GV+VI +++P +A
Sbjct: 121 GIVNHILNDLEVSCLPADLPEFIEVDLAAVELNQTVHLSDIKLPKGVTVITHGDDNPAVA 180
Query: 181 TAIIPVNTL 189
+ P +
Sbjct: 181 SISQPAGAV 189
>sp|Q2T1B8|RL25_BURTA 50S ribosomal protein L25 OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=rplY
PE=3 SV=2
Length = 208
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 149/201 (74%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H KVPLHF+N+E SPAVKL+S
Sbjct: 65 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLHFLNAESSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ + CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P +
Sbjct: 125 AVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHAKDIVLPNGVALTPHVDAENPVV 184
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + S+ ++ E E
Sbjct: 185 ASATIPAGAV-SEEAAAGEGE 204
>sp|B2AGT7|RL25_CUPTR 50S ribosomal protein L25 OS=Cupriavidus taiwanensis (strain R1 /
LMG 19424) GN=rplY PE=3 SV=1
Length = 205
Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 140/189 (74%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK E LLR FQ+H +K LVLH DFQRV KIHVKVPLHF+N E +P VKL
Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++++++DL +SCLP +LP+FIE+++ ME+ ++HLSD+KLP+GV+VI +++P IA
Sbjct: 121 GLVNHIVNDLEVSCLPADLPEFIEVDVGAMELGQTLHLSDLKLPKGVTVITHGDDNPAIA 180
Query: 181 TAIIPVNTL 189
+ P +
Sbjct: 181 SISQPAGAV 189
>sp|Q8Y2E2|RL25_RALSO 50S ribosomal protein L25 OS=Ralstonia solanacearum (strain
GMI1000) GN=rplY PE=3 SV=1
Length = 206
Score = 230 bits (587), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 142/188 (75%), Gaps = 1/188 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYG +P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GKVE LLR+FQLH +K+LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H+SD+KLP+GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISDLKLPKGVTIVTHGGDENPAV 180
Query: 180 ATAIIPVN 187
A +P
Sbjct: 181 ANISVPAG 188
>sp|B2UER5|RL25_RALPJ 50S ribosomal protein L25 OS=Ralstonia pickettii (strain 12J)
GN=rplY PE=3 SV=1
Length = 208
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 143/188 (76%), Gaps = 1/188 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYG +P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GKVE LLR+FQLH +K+LVLH DFQRV ++KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSAKEKIHVKVPLHFLNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H++D+KLP+GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHIADLKLPKGVTILTHGGDENPAV 180
Query: 180 ATAIIPVN 187
A +P
Sbjct: 181 ANISVPAG 188
>sp|B2JCN8|RL25_BURP8 50S ribosomal protein L25 OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=rplY PE=3 SV=1
Length = 203
Score = 226 bits (576), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 141/200 (70%), Gaps = 2/200 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERNLQGTGASRRLRNSGKAPGIVYGAG-EPQLIELDHNALWHALKKEAFHSSIL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LE+ GK + VLLR+ Q H +++LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL
Sbjct: 60 ELEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLGG 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
IIS+VI+++ I CLP LP+FIE++L K+E S+H +DI LP GV+++ H E+P I
Sbjct: 120 AIISHVINEIEIECLPAALPEFIEVDLAKIEAGQSLHATDIALPAGVALVAHLVAENPVI 179
Query: 180 ATAIIPVNTLESDNNSSIEK 199
+A IP + + EK
Sbjct: 180 VSAPIPAGAQSEEAAAEGEK 199
>sp|Q145X3|RL25_BURXL 50S ribosomal protein L25 OS=Burkholderia xenovorans (strain LB400)
GN=rplY PE=3 SV=1
Length = 207
Score = 224 bits (572), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL+S
Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFLNQETNPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+VI+++ I CLP LP+F+E++L +E S+H DIKLP GV+++ H E+P I
Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVTLVAHVEAENPVI 180
Query: 180 ATAIIP 185
A A IP
Sbjct: 181 AAATIP 186
>sp|B2SXG4|RL25_BURPP 50S ribosomal protein L25 OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=rplY PE=3 SV=1
Length = 206
Score = 224 bits (571), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL+S
Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQESNPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+VI+++ I CLP LP+F+E++L +E S+H DIKLP GVS++ H E+P +
Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVSLVAHVEAENPVV 180
Query: 180 ATAIIP 185
A A IP
Sbjct: 181 AAATIP 186
>sp|A4T069|RL25_POLSQ 50S ribosomal protein L25 OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=rplY PE=3 SV=1
Length = 213
Score = 220 bits (560), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 139/187 (74%), Gaps = 1/187 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + I ++HN ++HAL+KE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR++Q+H +K LVLH DFQRV +K+H++VPLHF N++ S AVKL
Sbjct: 61 DLEIDGKAQKVLLRDYQMHPFKPLVLHIDFQRVSASEKVHMRVPLHFTNADTSAAVKLQG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
+IS+++++L +SCLP +LP+F+E++L K+EV IH DI LP+GV+ V+H +E+P +
Sbjct: 121 AVISHILTELEVSCLPADLPEFVEVDLAKIEVGHGIHAKDIALPKGVTLVLHVEQENPVL 180
Query: 180 ATAIIPV 186
A A IP
Sbjct: 181 ANARIPA 187
>sp|Q5P723|RL25_AROAE 50S ribosomal protein L25 OS=Aromatoleum aromaticum (strain EbN1)
GN=rplY PE=3 SV=1
Length = 201
Score = 219 bits (559), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 138/185 (74%), Gaps = 2/185 (1%)
Query: 1 MKII--AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSS 58
M+I+ A +R ++GT SR LR+ G++PGIIYG + D I+++HN +YH LKKETFH+S
Sbjct: 1 MQIVFKATQRVEQGTGASRRLRRAGQIPGIIYGADTDAQAITVDHNELYHLLKKETFHAS 60
Query: 59 ILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
+L +E+ G V+LR+ Q H YK+ VLH DFQR+D ++H+KVPLHFIN++ +PAVKL
Sbjct: 61 VLMIELEGAKHTVVLRDVQWHPYKQQVLHLDFQRIDAGHQLHLKVPLHFINNDTNPAVKL 120
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
C+IS+ +++L I+CLP NLP+FIE++L+ +E SIH+S +KLP GV +H E DP
Sbjct: 121 GGCMISHTMTELDIACLPANLPEFIEVDLQSLEAGQSIHVSQLKLPEGVEAVHHGEGDPV 180
Query: 179 IATAI 183
+ATA+
Sbjct: 181 VATAL 185
>sp|A9I6W5|RL25_BORPD 50S ribosomal protein L25 OS=Bordetella petrii (strain ATCC BAA-461
/ DSM 12804 / CCUG 43448) GN=rplY PE=3 SV=1
Length = 207
Score = 219 bits (558), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 139/185 (75%), Gaps = 1/185 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG+ P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK E VLLR+ Q HAYK VLH DFQRVD + +H KVPLHFIN E SPAVKL+S
Sbjct: 61 QMQLDGKEEAVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPLHFINGENSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
IIS+V+++L I+CLP LP++IE++L + S+HLSD+KLP+GV+ V H ++ +P +
Sbjct: 121 AIISHVVTELEITCLPAALPQYIEVDLGNLLGGGSVHLSDVKLPKGVTYVAHGSDANPVL 180
Query: 180 ATAII 184
A+A++
Sbjct: 181 ASALV 185
>sp|B1XS65|RL25_POLNS 50S ribosomal protein L25 OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=rplY PE=3 SV=1
Length = 214
Score = 217 bits (552), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GTS SR LR GK PGI+YG + I ++HN ++HAL+KE FHSSIL
Sbjct: 1 MKVVAFERSVQGTSASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR++Q+H +K LVLH DFQRV KK+H++VPLHF N++ S AVKL
Sbjct: 61 DLEIGGKTQKVLLRDYQMHPFKPLVLHIDFQRVSATKKVHMRVPLHFTNADTSAAVKLQG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS++ ++L +S LP +LP+FIE++L K+EV IH DI LP+GV++I H +E+P +
Sbjct: 121 AVISHIATELEVSYLPADLPEFIEVDLAKIEVGHGIHAKDIALPKGVTLILHVEQENPVL 180
Query: 180 ATAIIP 185
A A IP
Sbjct: 181 ANARIP 186
>sp|A1TT74|RL25_ACIAC 50S ribosomal protein L25 OS=Acidovorax citrulli (strain AAC00-1)
GN=rplY PE=3 SV=1
Length = 210
Score = 216 bits (551), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 130/170 (76%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK VLLR+ Q H YK+LVLH DFQRVD + K+H+KVPLHF +E SPAVK++
Sbjct: 61 DMELAGKTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFTGAEESPAVKIDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
C+++ V ++L +SC+P +LP+FI ++L K+E S+HL DIKLPRGVS +
Sbjct: 121 CMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKLPRGVSPV 170
>sp|Q7W180|RL25_BORPA 50S ribosomal protein L25 OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=rplY PE=3 SV=1
Length = 204
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 136/186 (73%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEI-YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
N+ I GK E VLLR+ Q HAYK V+H DFQRVD + +H KVPLHFIN+E+SPAVKL+
Sbjct: 61 NMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVDANQALHTKVPLHFINAEVSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV-IHSTEEDPT 178
IIS+V+++L I+CLP LP+FIE+NL + SIHL+DIKLP+GV+ H + +P
Sbjct: 121 GAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGDTNPL 180
Query: 179 IATAII 184
IA A++
Sbjct: 181 IAAAVV 186
>sp|Q7WNY3|RL25_BORBR 50S ribosomal protein L25 OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=rplY PE=3 SV=1
Length = 204
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 136/186 (73%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEI-YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
N+ I GK E VLLR+ Q HAYK V+H DFQRVD + +H KVPLHFIN+E+SPAVKL+
Sbjct: 61 NMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVDANQALHTKVPLHFINAEVSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV-IHSTEEDPT 178
IIS+V+++L I+CLP LP+FIE+NL + SIHL+DIKLP+GV+ H + +P
Sbjct: 121 GAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGDTNPL 180
Query: 179 IATAII 184
IA A++
Sbjct: 181 IAAAVV 186
>sp|A1K3G6|RL25_AZOSB 50S ribosomal protein L25 OS=Azoarcus sp. (strain BH72) GN=rplY
PE=3 SV=1
Length = 200
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 132/178 (74%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ +G+S SR LR+ +VPGIIYG KD I+++HN +YH LKKE FH+S+L++ +
Sbjct: 7 ATKREGQGSSASRRLRRAAQVPGIIYGAGKDAQPITLDHNELYHLLKKEAFHASVLSINV 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G E V+LR+ Q HAYK+ VLH DFQRVD +K+H+KVPLHF+N + +PAVKL II+
Sbjct: 67 EGAKETVVLRDTQWHAYKQQVLHIDFQRVDASQKLHLKVPLHFVNGDNAPAVKLGGNIIA 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+V+++L + CLP +LP+FIE++L +E SIH+S +KLP GV +H E DP +A+A
Sbjct: 127 HVMTELDVQCLPSSLPEFIEVDLAALEAGQSIHVSQLKLPAGVEAVHHGEGDPVVASA 184
>sp|Q7VUH2|RL25_BORPE 50S ribosomal protein L25 OS=Bordetella pertussis (strain Tohama I
/ ATCC BAA-589 / NCTC 13251) GN=rplY PE=3 SV=1
Length = 208
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+ IL
Sbjct: 5 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHALIL 64
Query: 61 NLEI-YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
N+ I GK E VLLR+ Q HAYK V+H DFQRV+ + +H KVPLHFIN+E+SPAVKL+
Sbjct: 65 NMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVEANQALHTKVPLHFINAEVSPAVKLS 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV-IHSTEEDPT 178
IIS+V+++L I+CLP LP+FIE+NL + SIHL+DIKLP+GV+ H + +P
Sbjct: 125 GAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGDTNPL 184
Query: 179 IATAII 184
IA A++
Sbjct: 185 IAAAVV 190
>sp|Q12E00|RL25_POLSJ 50S ribosomal protein L25 OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=rplY PE=3 SV=1
Length = 227
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 131/176 (74%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR G+ PGI+YGG +P I ++HN ++HA+KKE FH+S+L
Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGTGEPSLIELDHNALWHAIKKEAFHASVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK E VLLR+ Q+H +K+ VLH DFQRVD ++ +KVPLH+ E SPAVK+ +
Sbjct: 61 EMEMGGKTEKVLLRDLQMHPFKQQVLHIDFQRVDARTRLTMKVPLHYSGEEESPAVKVEN 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
C++++V+++L ISCLPK+LP+FI+INL ++ TS+H+ DI LP+GV + +D
Sbjct: 121 CLVNHVLTELSISCLPKDLPEFIDINLGGLKKGTSLHVKDITLPKGVKFVAKGGQD 176
>sp|Q3SLR4|RL25_THIDA 50S ribosomal protein L25 OS=Thiobacillus denitrificans (strain
ATCC 25259) GN=rplY PE=3 SV=1
Length = 201
Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++IA +R+ +GT SR LR GKVPGI+YGG+ PV+I ++HN +YHAL+KE FH+S+L
Sbjct: 3 IEVIASKRELQGTGASRRLRHAGKVPGIVYGGSTAPVQIELDHNALYHALRKEAFHASVL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + G E VLLR+ Q H YK+ VLH DFQRVD + KIHVKVPLHF+N+E+SP VKL
Sbjct: 63 SLSVDGAKESVLLRDAQWHPYKQQVLHVDFQRVDKDHKIHVKVPLHFLNAEVSPGVKLGG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+++++L + C P +LP+FIE+++ +EV SIH +D+ LP GV ++ H +E+P +
Sbjct: 123 GKPHHIVNELDVQCFPGSLPEFIEVDMGALEVGHSIHANDLVLPAGVELVAHVKQENPAV 182
Query: 180 ATAIIPVNTLE 190
A P +E
Sbjct: 183 AVIHAPKGGVE 193
>sp|Q21XW2|RL25_RHOFD 50S ribosomal protein L25 OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=rplY PE=3 SV=1
Length = 223
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 134/184 (72%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR G+ PGI+YGG +P +I ++HN ++HALKKE FH+++L
Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGGAEPQQIEIDHNALWHALKKEAFHAAVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK VLLR+ Q+H +K+L+LH DFQRVD ++H+KVPLH+ E SPAVK
Sbjct: 61 DMELDGKDNKVLLRDVQMHPFKQLILHVDFQRVDASTRLHMKVPLHYSGDENSPAVKTEG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
CI ++VI+++ + CLP +LP+FI ++L ++ S+HL+D+ LP+GV+ + ++P +
Sbjct: 121 CIANHVITEIEVLCLPTDLPEFIAVDLSGLKKGASLHLADVALPKGVTAVTRGNKNPVLV 180
Query: 181 TAII 184
+ ++
Sbjct: 181 SVVV 184
>sp|A1WGH1|RL25_VEREI 50S ribosomal protein L25 OS=Verminephrobacter eiseniae (strain
EF01-2) GN=rplY PE=3 SV=1
Length = 235
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 131/170 (77%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQMIELDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK + VLLR+ Q H +K+ VLH DFQRVD + ++H+KVPLH+ SE S AVK++
Sbjct: 61 DMEVAGKTDKVLLRDVQYHPFKQCVLHIDFQRVDDKTRLHMKVPLHYSGSEESNAVKVDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
C+++ ++++L ++C+P +LP+FI ++L K+E TS+HL DIKLPRGV+ +
Sbjct: 121 CMVNLIVNELDVTCMPSDLPEFIAVDLSKLEKGTSLHLKDIKLPRGVTPV 170
>sp|C5CYZ6|RL25_VARPS 50S ribosomal protein L25 OS=Variovorax paradoxus (strain S110)
GN=rplY PE=3 SV=1
Length = 224
Score = 204 bits (519), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 135/186 (72%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR GK PGI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKFVAFERAKQGTGASRRLRISGKTPGIVYGGEGKPQLIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G VLLR+ Q H +++LV H DFQRVD + ++H+KVPLH+ E S AVKL+
Sbjct: 61 EMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRMHMKVPLHYKGEEESDAVKLDH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++++V+++L +SCLP +LP+FIE++L ++ N ++H++DIKLP+GV + + +P I
Sbjct: 121 NLVTHVMTELEVSCLPADLPEFIEVDLSGLKKNATLHVNDIKLPKGVKFVSHGKLNPVIV 180
Query: 181 TAIIPV 186
+A+ P+
Sbjct: 181 SAVPPL 186
>sp|B1Y3Q0|RL25_LEPCP 50S ribosomal protein L25 OS=Leptothrix cholodnii (strain ATCC
51168 / LMG 8142 / SP-6) GN=rplY PE=3 SV=1
Length = 208
Score = 202 bits (515), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AF R+ +GT SR LR GKVPGI+YGG+ P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKFVAFARELQGTGASRRLRHGGKVPGIVYGGSGKPTSIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G+ E V+LR Q+HA+K+LVLH DFQRVD +I KVPLHF+N S AVKL+
Sbjct: 61 EMELAGQSEKVVLRALQMHAFKQLVLHVDFQRVDETTRIKKKVPLHFVNEAESQAVKLDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
C+I++V+S+L I CL + LP+F+ ++L + S+H+ D+KL + V+ ++P +A
Sbjct: 121 CLINHVVSELEIECLAEKLPEFLTVDLGGLSKGQSLHVDDLKLEASIKVVTHGRKNPVVA 180
Query: 181 TAIIPV 186
T ++P+
Sbjct: 181 T-VVPI 185
>sp|Q2KYA2|RL25_BORA1 50S ribosomal protein L25 OS=Bordetella avium (strain 197N) GN=rplY
PE=3 SV=1
Length = 198
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 131/185 (70%), Gaps = 2/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +GTS SR LR+ G+VP I+YGG P+ I ++HN I+HAL+KE FH+SIL
Sbjct: 1 MKFNATLRSVQGTSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIFHALRKEQFHASIL 60
Query: 61 NLEIYGKV-ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ + G E VLLR+ Q H +K+ VLH DFQRVD + +H KVPLHF+N+E SPAVKL+
Sbjct: 61 TMALEGGANEQVLLRSVQWHPFKQQVLHVDFQRVDANQALHTKVPLHFVNAETSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
IIS+V++++ ++CLP++LP+FIE++L + SIH DI LP+GV+ H +E I
Sbjct: 121 GAIISHVVTEVEVTCLPQSLPQFIEVDLGNLLGGGSIHQKDIVLPKGVTFTHPNDEQ-VI 179
Query: 180 ATAII 184
+A++
Sbjct: 180 VSAVV 184
>sp|Q479M1|RL25_DECAR 50S ribosomal protein L25 OS=Dechloromonas aromatica (strain RCB)
GN=rplY PE=3 SV=1
Length = 203
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 125/172 (72%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R +GT SR LR KVPGI+YGG P I ++HN + LKKE FHSSI+NL I
Sbjct: 7 AQARTLQGTGASRRLRHAAKVPGIVYGGAAAPQSIEVDHNDLLLKLKKEAFHSSIINLII 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK E VLLR+ Q+HAYK LVLH DFQRVD ++HVKVPLHF+N E++P VKLN +++
Sbjct: 67 DGKKEQVLLRDTQVHAYKPLVLHVDFQRVDATHELHVKVPLHFVNEEVAPGVKLNGGLVN 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+V++++ I CL +LP+FIE++L +++ SIHLS +KLP+GV ++H T +D
Sbjct: 127 HVMTEVDIQCLAGDLPEFIEVDLSSLKIGGSIHLSQLKLPKGVKIVHHTADD 178
>sp|Q1H3J2|RL25_METFK 50S ribosomal protein L25 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=rplY PE=3 SV=1
Length = 207
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 131/182 (71%), Gaps = 1/182 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A +R+ KGTS SR LR+ G VPG++YGG+K+ V + NH ++ + ETFH+SIL
Sbjct: 3 ITIKATKREGKGTSASRRLRRAGNVPGVVYGGDKEAVSLEFNHKELFLEFRHETFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
NLE+ G+ E V+LR++QLH + + H DFQRV +K+HVKVPLHFIN++I+P VKL
Sbjct: 63 NLEVDGQKEQVVLRDYQLHPVRNTIQHIDFQRVSASEKVHVKVPLHFINADIAPGVKLAG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTI 179
I+++++++ +SCLPK+LP+FIE++L +E SIHLS IKLP GV + + + D +
Sbjct: 123 GIVTHILTEADVSCLPKDLPEFIEVDLSNLEAGHSIHLSQIKLPNGVEFVQLAHDNDAAV 182
Query: 180 AT 181
A+
Sbjct: 183 AS 184
>sp|A1W4G1|RL25_ACISJ 50S ribosomal protein L25 OS=Acidovorax sp. (strain JS42) GN=rplY
PE=3 SV=1
Length = 208
Score = 193 bits (491), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +AFER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MQFVAFERAKQGTGASRRLRISGKAPGIVYGGSAEPQLIEIDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G+V VLLR+ Q H +K+ VLH DFQRVD + ++H+KVPLHF E S AVK+
Sbjct: 61 DMELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDEKTRVHLKVPLHFEGVEGSQAVKVEG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C ++ +I +L + C+P LP+FI+++L + +++ L +KLP GV +V+ + ++P +
Sbjct: 121 CTVTPLIHELDVMCMPAQLPEFIKVDLSGLTSKSTMGLQSVKLPHGVKAVVRGSNKNPAL 180
Query: 180 ATAIIP 185
+ +P
Sbjct: 181 VSIKLP 186
>sp|B9ME47|RL25_ACIET 50S ribosomal protein L25 OS=Acidovorax ebreus (strain TPSY)
GN=rplY PE=3 SV=1
Length = 208
Score = 193 bits (491), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +AFER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MQFVAFERAKQGTGASRRLRISGKAPGIVYGGSAEPQLIEIDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G+V VLLR+ Q H +K+ VLH DFQRVD + ++H+KVPLHF E S AVK+
Sbjct: 61 DMELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDEKTRVHLKVPLHFEGVEGSQAVKVEG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C ++ +I +L + C+P LP+FI+++L + +++ L +KLP GV +V+ + ++P +
Sbjct: 121 CTVTPLIHELDVMCMPAQLPEFIKVDLSGLTSKSTMGLQSVKLPHGVKAVVRGSNKNPAL 180
Query: 180 ATAIIP 185
+ +P
Sbjct: 181 VSIKLP 186
>sp|A2SKU2|RL25_METPP 50S ribosomal protein L25 OS=Methylibium petroleiphilum (strain
PM1) GN=rplY PE=3 SV=1
Length = 214
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 133/184 (72%), Gaps = 1/184 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +A+ R+ +GT SR LR GKVPGI+YG +P+KI ++HN ++HALKKE FH+S+L
Sbjct: 1 MKFVAYPRELQGTGASRRLRISGKVPGIVYGAG-EPLKIELDHNALFHALKKEAFHASLL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E GK + VLLR+ Q+HA++ VLH DFQRVD ++ KVPLHF+N E +P VKL+
Sbjct: 60 DMEFNGKSQQVLLRDVQMHAFRPQVLHVDFQRVDATTRVTKKVPLHFVNEENAPGVKLDK 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+IS+V+++L + CL LP+++ ++L ++ S+H++D+KLP V V+ +++P IA
Sbjct: 120 GLISHVVTELEVECLASQLPEYLTVDLGELAKGQSLHVNDLKLPPSVKVVLRGKKNPVIA 179
Query: 181 TAII 184
T ++
Sbjct: 180 TVVM 183
>sp|A9BP18|RL25_DELAS 50S ribosomal protein L25 OS=Delftia acidovorans (strain DSM 14801
/ SPH-1) GN=rplY PE=3 SV=1
Length = 209
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +AFER K+GT SR LR GK PGI+YGG + I ++HN ++HALKKE FHSSIL
Sbjct: 1 MQFVAFERAKQGTGASRRLRNSGKAPGIVYGGAAEAQLIEIDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G+ V+LR+ Q H YK+L+LH DFQRVD + K+H+KVPLHF E S AVK+ +
Sbjct: 61 DMEVNGQTSKVVLRDVQFHPYKQLILHVDFQRVDDKTKVHLKVPLHFEGMEQSQAVKVEN 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C I+ ++ +L + C+P LP+FI ++L + +++ L +KLP GV +V+ + ++P +
Sbjct: 121 CTITPLVHELDVVCMPAQLPEFITVDLSGLTSKSTLGLQGLKLPNGVKAVVRGSNKNPAL 180
Query: 180 ATAIIP 185
+ +P
Sbjct: 181 ISIKLP 186
>sp|Q2YBH3|RL25_NITMU 50S ribosomal protein L25 OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=rplY PE=3 SV=1
Length = 228
Score = 189 bits (481), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A +R+ +G SR LR GKVPGIIYGG I ++HN +YH LK E FH+SIL
Sbjct: 3 IEISAEKRELQGKGASRRLRGSGKVPGIIYGGENPAQPIELDHNNLYHQLKLEAFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ + G+ E VLLR+ Q+H +K VLH DFQRV + KKIH+KVPLHFIN +I+P VKL
Sbjct: 63 TMSVEGQKEKVLLRDIQMHPFKPQVLHIDFQRVASNKKIHMKVPLHFINEDIAPGVKLAG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE-EDPTI 179
++S+V+++L +SCLPK+LP+FI +++ ++ +IHLS+++LP GV + + ED +
Sbjct: 123 GLVSHVLTELDVSCLPKDLPEFISVDVGELAAGNTIHLSNLQLPEGVEIPALMKGEDLPV 182
Query: 180 ATAIIP 185
AT IP
Sbjct: 183 ATIAIP 188
>sp|A1VKN7|RL25_POLNA 50S ribosomal protein L25 OS=Polaromonas naphthalenivorans (strain
CJ2) GN=rplY PE=3 SV=1
Length = 218
Score = 186 bits (473), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 122/181 (67%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR G+ PGI+YGG +P+ I ++HN ++HA+KKE FH SIL
Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGTAEPILIEIDHNALWHAIKKEAFHGSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G VLLR+ Q+H YK+ V H DFQRV+ ++ VKVP+HF E SPAVK +
Sbjct: 61 EMELGGTEHKVLLRDLQMHPYKQQVQHIDFQRVEARTRMTVKVPVHFSGEEESPAVKTEN 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
C++++V++++ +SC P ++P FI ++L + S+H+ DI LP+ V + +P +
Sbjct: 121 CLVTHVLTEMTVSCFPADIPDFIAVDLGGLTKGKSLHVKDIVLPKRVKAAVKGQVNPVMV 180
Query: 181 T 181
+
Sbjct: 181 S 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,083,765
Number of Sequences: 539616
Number of extensions: 3010310
Number of successful extensions: 9308
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 8309
Number of HSP's gapped (non-prelim): 584
length of query: 205
length of database: 191,569,459
effective HSP length: 112
effective length of query: 93
effective length of database: 131,132,467
effective search space: 12195319431
effective search space used: 12195319431
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)