BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8561
(205 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|134096054|ref|YP_001101129.1| 50S ribosomal protein L25 [Herminiimonas arsenicoxydans]
gi|166223689|sp|A4G921.1|RL25_HERAR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|133739957|emb|CAL63008.1| 50S ribosomal protein L25 (General stress protein CTC)
[Herminiimonas arsenicoxydans]
Length = 210
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 154/191 (80%), Gaps = 1/191 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF R GT SR R G PGI+YGG PV IS++HN +YHALKKE FHSSIL
Sbjct: 1 MKVIAFARNDLGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GKVE VLLR+FQ+HAYK+LVLHADFQRVD ++KIHVKVPLHFIN+EISPAVKL +
Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFINAEISPAVKLQA 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG-VSVIHSTEEDPTI 179
IIS+V ++L I+CLP NLP+F+E++L +EV SIHL+DIKLP+G V+VIH E++PTI
Sbjct: 121 GIISHVATELDITCLPGNLPEFVEVDLATLEVGHSIHLADIKLPKGVVAVIHGGEDNPTI 180
Query: 180 ATAIIPVNTLE 190
ATA +P +E
Sbjct: 181 ATAAVPAGKVE 191
>gi|399019855|ref|ZP_10721998.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. CF444]
gi|398096874|gb|EJL87189.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. CF444]
Length = 202
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 159/193 (82%), Gaps = 2/193 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF RK++GT SR LR G+ P I+YGG P+ I+++HN +YHALKKE FHSSIL
Sbjct: 1 MKVIAFPRKEQGTGASRRLRNAGQTPAIVYGGTAAPLNIALDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GKVE VLLR+FQ+HAYK+LVLH DFQRVD +KIHVKVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEIDGKVEQVLLRDFQVHAYKQLVLHVDFQRVDASQKIHVKVPLHFVNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IIS+V++DL ISCLPK+LP+F+ ++L K+EV SIHL+D++LP GV+ + ++E+ T+A
Sbjct: 121 GIISHVMTDLDISCLPKDLPEFVSVDLSKLEVGHSIHLADLQLPSGVTAV--SQENLTVA 178
Query: 181 TAIIPVNTLESDN 193
TA +P +E+D+
Sbjct: 179 TASVPAGKVEADS 191
>gi|152980425|ref|YP_001354819.1| 50S ribosomal protein L25 [Janthinobacterium sp. Marseille]
gi|166223690|sp|A6T2S2.1|RL25_JANMA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|151280502|gb|ABR88912.1| large subunit ribosomal protein L25 [Janthinobacterium sp.
Marseille]
Length = 214
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 122/191 (63%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF RK+ GT SR R G PGI+YGG PV IS++HN +YHALKKE FHSSIL
Sbjct: 1 MKVIAFARKELGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GKVE VLLR+FQ+HAYK+LVLHADFQRVD ++KIHVKVPLHF+N+E SPAVKL+
Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFVNAETSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
IIS+V S+L I+CLP +LP+F+E++L ++V SIHL+DIKLP+GV +VIH E++PTI
Sbjct: 121 GIISHVASELDITCLPSDLPEFVEVDLANLDVGHSIHLADIKLPKGVAAVIHGGEDNPTI 180
Query: 180 ATAIIPVNTLE 190
ATA +P +E
Sbjct: 181 ATASVPAGKVE 191
>gi|124483376|emb|CAM32561.1| 50S ribosomal subunit protein L25 [Herbaspirillum seropedicae]
Length = 202
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 156/189 (82%), Gaps = 2/189 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF RK++GT SR LR+ G+ PGI+YGG P+ I+++HN +YHALKKETFHSSIL
Sbjct: 1 MKVIAFPRKEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GKVE VLLR+FQ+HAYK+LVLH DFQRVD +K+H KVPLHF+N+E+SPAVKL+
Sbjct: 61 DLEIEGKVEQVLLRDFQVHAYKQLVLHVDFQRVDASQKLHTKVPLHFVNAEVSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IIS+V ++L ++CLPKNLP+FIE++L K++V SIHL+D+KLP GV+ + T+E+ TIA
Sbjct: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAV--TQENLTIA 178
Query: 181 TAIIPVNTL 189
TA +P +
Sbjct: 179 TATVPAGQV 187
>gi|415906029|ref|ZP_11552650.1| 50S ribosomal subunit protein L25 [Herbaspirillum frisingense
GSF30]
gi|407763203|gb|EKF71905.1| 50S ribosomal subunit protein L25 [Herbaspirillum frisingense
GSF30]
Length = 202
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 155/187 (82%), Gaps = 2/187 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF R ++GT SR LR+ G+ PGI+YGG P+ I+++HN +YHALKKETFHSSIL
Sbjct: 1 MKVIAFPRNEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GKVE VLLR+FQ+HA+K+LVLH DFQRVD +K+H KVPLHF+N+E+SPAVKL++
Sbjct: 61 DLEIDGKVEQVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLHFVNAEVSPAVKLHA 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IIS+V ++L ++CLPKNLP+FIE++L K++V SIHL+D+KLP GV+ + T+E+ TIA
Sbjct: 121 GIISHVAAELDVTCLPKNLPEFIEVDLSKLDVGQSIHLADLKLPNGVTAV--TQENLTIA 178
Query: 181 TAIIPVN 187
TA +P
Sbjct: 179 TATVPAG 185
>gi|409407694|ref|ZP_11256145.1| large subunit ribosomal protein L25 [Herbaspirillum sp. GW103]
gi|386433445|gb|EIJ46271.1| large subunit ribosomal protein L25 [Herbaspirillum sp. GW103]
Length = 202
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 153/187 (81%), Gaps = 2/187 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF R ++GT SR LR+ G+ PGI+YGG P I+++HN +YHALKKETFHSSIL
Sbjct: 1 MKVIAFPRNEQGTGASRRLRRAGQTPGIVYGGTAAPTNIAVDHNALYHALKKETFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GKVE VLLR+FQ+HA+K+LVLH DFQRVD +K+H KVPLHF+N+E+SPAVKL+
Sbjct: 61 DLEIDGKVEQVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLHFVNAEVSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IIS+V ++L ++CLPKNLP+FIE++L K++V SIHL+D+KLP GV+ + T+E+ TIA
Sbjct: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAV--TQENLTIA 178
Query: 181 TAIIPVN 187
TA +P
Sbjct: 179 TATVPAG 185
>gi|340785804|ref|YP_004751269.1| 50S ribosomal protein L25 [Collimonas fungivorans Ter331]
gi|340551071|gb|AEK60446.1| LSU ribosomal protein L25p [Collimonas fungivorans Ter331]
Length = 208
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 155/187 (82%), Gaps = 2/187 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF RK++GT SR LR G+ PGI+YGG+ PV IS++HN +YHALKKETFHSSIL
Sbjct: 1 MKVIAFVRKEQGTGASRRLRNAGQTPGIVYGGSDAPVNISLDHNALYHALKKETFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI G V+ VLLR+FQ+HAYK+LVLHADFQRVD ++ IHVKVPLHF+N+EI+PAVKL+
Sbjct: 61 DLEIDGAVQKVLLRDFQVHAYKQLVLHADFQRVDAKQAIHVKVPLHFVNAEIAPAVKLSG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IIS+V ++L ++CLP +LP+FIE++L +EV SIHL+D+KLP+GV+ + ++E+ TIA
Sbjct: 121 AIISHVFTELEVTCLPADLPEFIEVDLTNIEVGHSIHLADLKLPKGVAAV--SQENVTIA 178
Query: 181 TAIIPVN 187
TA IP
Sbjct: 179 TASIPAG 185
>gi|398831927|ref|ZP_10590096.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. YR522]
gi|398224089|gb|EJN10414.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. YR522]
Length = 201
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 153/189 (80%), Gaps = 2/189 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MKII F RK++GT SR LR G+ PGI+YGG PV I+++HN +YHALKKETFH+SIL
Sbjct: 1 MKIIGFPRKEQGTGASRRLRIAGQTPGIVYGGTAAPVNIALDHNALYHALKKETFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GKVE VLLR+FQ+HA+K+LVLH DFQRVD +K+H KVPLHF+N+EISPAVKL+S
Sbjct: 61 DLEIEGKVEQVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLHFVNAEISPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I+S+V S+L + CLPKNLP+FIE++L +++ SIHL+D+KLP GV+ + ++E+ TIA
Sbjct: 121 GIVSHVQSELDVQCLPKNLPEFIEVDLANLQIGQSIHLADLKLPVGVTAV--SQENLTIA 178
Query: 181 TAIIPVNTL 189
TA +P +
Sbjct: 179 TATVPAGQV 187
>gi|430809763|ref|ZP_19436878.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
sp. HMR-1]
gi|429497787|gb|EKZ96310.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
sp. HMR-1]
Length = 203
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 144/199 (72%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVIAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK E LLR FQ+H +K LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSASEKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I+S++++DL +SCLP +LP+FIE++L E+N +IHLSD+KLP+GV+ I +E+P IA
Sbjct: 121 GIVSHILNDLEVSCLPADLPEFIEVDLAAAELNQTIHLSDLKLPKGVTAITHGDENPAIA 180
Query: 181 TAIIPVNTLESDNNSSIEK 199
+ +P S+ E+
Sbjct: 181 SITLPAGAQSSEAAEGGEE 199
>gi|94309233|ref|YP_582443.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
metallidurans CH34]
gi|166223709|sp|Q1LRQ2.1|RL25_RALME RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|93353085|gb|ABF07174.1| 50S ribosomal protein L25 (General stress protein CTC) [Cupriavidus
metallidurans CH34]
Length = 203
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 144/199 (72%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK E LLR FQ+H +K LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSATEKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I+S++++DL +SCLP +LP+FIE++L E+N +IHLSD+KLP+GV+ I +E+P IA
Sbjct: 121 GIVSHILNDLEVSCLPADLPEFIEVDLAAAELNQTIHLSDLKLPKGVTAITHGDENPAIA 180
Query: 181 TAIIPVNTLESDNNSSIEK 199
+ +P S+ E+
Sbjct: 181 SITLPAGAQSSEAAEGGEE 199
>gi|238028669|ref|YP_002912900.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
glumae BGR1]
gi|237877863|gb|ACR30196.1| 50S ribosomal protein L25 [Burkholderia glumae BGR1]
Length = 204
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 149/201 (74%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER ++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERTQQGTGASRRLRNTGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQRVD KK+H KVP+HF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGKSQSVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+VI++L + CLP LP+F+E++L K+E S+H DI LP GV+++ H E+P I
Sbjct: 121 AVVSHVITELDVECLPSALPEFLEVDLSKLEAGQSVHAKDITLPNGVALVAHIDAENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
ATA IP + SD+ ++ E E
Sbjct: 181 ATATIPAGAV-SDDAAAGEGE 200
>gi|402565435|ref|YP_006614780.1| 50S ribosomal protein L25 [Burkholderia cepacia GG4]
gi|402246632|gb|AFQ47086.1| 50S ribosomal protein L25 [Burkholderia cepacia GG4]
Length = 201
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H K PLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ I CLP +LP+F+E++L K+E S+H DI LP+GV+++ H E+P +
Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKLEAGQSLHAKDIALPKGVALVAHVDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A IP +
Sbjct: 181 ASATIPAGAV 190
>gi|107023736|ref|YP_622063.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
cenocepacia AU 1054]
gi|116690823|ref|YP_836446.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
cenocepacia HI2424]
gi|170734148|ref|YP_001766095.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
cenocepacia MC0-3]
gi|123244641|sp|Q1BTG5.1|RL25_BURCA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223665|sp|A0KAM6.1|RL25_BURCH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736289|sp|B1JYQ0.1|RL25_BURCC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|105893925|gb|ABF77090.1| LSU ribosomal protein L25P [Burkholderia cenocepacia AU 1054]
gi|116648912|gb|ABK09553.1| LSU ribosomal protein L25P [Burkholderia cenocepacia HI2424]
gi|169817390|gb|ACA91973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
cenocepacia MC0-3]
Length = 201
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H K PLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ I CLP +LP+F+E++L K+E S+H DI LP+GV+++ H E+P I
Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAENPVI 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>gi|254247176|ref|ZP_04940497.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184]
gi|124871952|gb|EAY63668.1| 50S ribosomal protein L25 [Burkholderia cenocepacia PC184]
Length = 205
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H K PLHF+N+E+SPAVKL+S
Sbjct: 65 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEVSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ I CLP +LP+F+E++L K+E S+H DI LP+GV+++ H E+P I
Sbjct: 125 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHVDAENPVI 184
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 185 ASATVPAGAV 194
>gi|421870811|ref|ZP_16302440.1| LSU ribosomal protein L25p [Burkholderia cenocepacia H111]
gi|444358310|ref|ZP_21159745.1| ribosomal protein L25, Ctc-form [Burkholderia cenocepacia BC7]
gi|444369703|ref|ZP_21169426.1| ribosomal protein L25, Ctc-form [Burkholderia cenocepacia
K56-2Valvano]
gi|358069140|emb|CCE53318.1| LSU ribosomal protein L25p [Burkholderia cenocepacia H111]
gi|443598720|gb|ELT67050.1| ribosomal protein L25, Ctc-form [Burkholderia cenocepacia
K56-2Valvano]
gi|443604327|gb|ELT72269.1| ribosomal protein L25, Ctc-form [Burkholderia cenocepacia BC7]
Length = 201
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ + CLP LP+F+E++L K+E S+H DI LP+GV+++ H E+P +
Sbjct: 121 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKGVTLVAHVDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>gi|206559196|ref|YP_002229956.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
cenocepacia J2315]
gi|198035233|emb|CAR51107.1| ribosomal L25p family protein [Burkholderia cenocepacia J2315]
Length = 205
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 65 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ + CLP LP+F+E++L K+E S+H DI LP+GV+++ H E+P +
Sbjct: 125 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKGVTLVAHVDAENPVV 184
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 185 ASATVPAGAV 194
>gi|171320165|ref|ZP_02909227.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria MEX-5]
gi|171094579|gb|EDT39631.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria MEX-5]
Length = 202
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ + CLP LP+F+E++L K+E S+H DI LP+GV+++ H E+P +
Sbjct: 121 AIVSHVATEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHIDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A IP +
Sbjct: 181 ASATIPAGAV 190
>gi|115352914|ref|YP_774753.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
ambifaria AMMD]
gi|170701088|ref|ZP_02892064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria IOP40-10]
gi|172061762|ref|YP_001809414.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
ambifaria MC40-6]
gi|122322183|sp|Q0BBQ4.1|RL25_BURCM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736288|sp|B1YN53.1|RL25_BURA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115282902|gb|ABI88419.1| LSU ribosomal protein L25P [Burkholderia ambifaria AMMD]
gi|170133989|gb|EDT02341.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria IOP40-10]
gi|171994279|gb|ACB65198.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
ambifaria MC40-6]
Length = 202
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V +++ I CLP LP+F+E++L K+E S+H DI LP+GV+++ H E+P +
Sbjct: 121 AVVSHVATEIEIECLPSALPEFLEVDLSKIEAGQSLHAKDIALPKGVALVAHIDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A IP +
Sbjct: 181 ASATIPAGAV 190
>gi|377819691|ref|YP_004976062.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. YI23]
gi|357934526|gb|AET88085.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. YI23]
Length = 205
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 150/202 (74%), Gaps = 2/202 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER K+GT SR LR GK PGI+YGG D + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSKQGTGASRRLRNSGKTPGIVYGGETDVQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL+
Sbjct: 61 DLEVAGKSQPVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLSG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE-EDPTI 179
+IS+V+++L + CLP +LP+F+EI+L K+E ++H DI LP+GVS+ S E E+P +
Sbjct: 121 AVISHVVTELEVECLPADLPEFLEIDLAKIEAGQTMHAKDIALPKGVSLTVSVEAENPVV 180
Query: 180 ATAIIPVNTLESDNNSSIEKEK 201
A+A +P ++S+ + E EK
Sbjct: 181 ASATVPA-AVQSEAGEAAEGEK 201
>gi|161523692|ref|YP_001578704.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
multivorans ATCC 17616]
gi|189351544|ref|YP_001947172.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
multivorans ATCC 17616]
gi|226736290|sp|A9AEY7.1|RL25_BURM1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|160341121|gb|ABX14207.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
multivorans ATCC 17616]
gi|189335566|dbj|BAG44636.1| large subunit ribosomal protein L25 [Burkholderia multivorans ATCC
17616]
Length = 201
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFERK++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ + CLP LP+F+E++L K+E SIH DI LP+GV++ H E+P I
Sbjct: 121 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPKGVALTAHVDAENPVI 180
Query: 180 ATAIIPVNTL 189
A+A IP +
Sbjct: 181 ASATIPAGAV 190
>gi|221199984|ref|ZP_03573027.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M]
gi|221206861|ref|ZP_03579873.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2]
gi|221211192|ref|ZP_03584171.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1]
gi|421468742|ref|ZP_15917262.1| ribosomal protein L25, Ctc-form [Burkholderia multivorans ATCC
BAA-247]
gi|221168553|gb|EEE01021.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD1]
gi|221173516|gb|EEE05951.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2]
gi|221180223|gb|EEE12627.1| 50S ribosomal protein L25 [Burkholderia multivorans CGD2M]
gi|400231324|gb|EJO61026.1| ribosomal protein L25, Ctc-form [Burkholderia multivorans ATCC
BAA-247]
Length = 205
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFERK++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 65 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ + CLP LP+F+E++L K+E SIH DI LP+GV++ H E+P I
Sbjct: 125 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPKGVALTAHVDAENPVI 184
Query: 180 ATAIIPVNTL 189
A+A IP +
Sbjct: 185 ASATIPAGAV 194
>gi|78067602|ref|YP_370371.1| 50S ribosomal protein L25 [Burkholderia sp. 383]
gi|109893349|sp|Q39CT9.1|RL25_BURS3 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77968347|gb|ABB09727.1| LSU ribosomal protein L25P [Burkholderia sp. 383]
Length = 201
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQEQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H K PLHF+N+EISPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKAPLHFLNAEISPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ I CLP +LP+F+E++L K+E S+H DI LP+GV ++ H E+P +
Sbjct: 121 AIVSHVATEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDITLPKGVVLVAHVDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>gi|134296999|ref|YP_001120734.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
vietnamiensis G4]
gi|387903316|ref|YP_006333655.1| 50S ribosomal protein L25 [Burkholderia sp. KJ006]
gi|166223669|sp|A4JHZ6.1|RL25_BURVG RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|134140156|gb|ABO55899.1| LSU ribosomal protein L25P [Burkholderia vietnamiensis G4]
gi|387578208|gb|AFJ86924.1| LSU ribosomal protein L25p [Burkholderia sp. KJ006]
Length = 201
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P KI ++HN ++HALKKE FH+SIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQKIELDHNALWHALKKEAFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEIAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ + CLP LP+F+E++L K+E S+H DI LP GV+++ H E+P +
Sbjct: 121 AIVSHVTTEIEVECLPSALPEFLEVDLSKIEAGQSLHAKDIALPNGVALVAHVDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>gi|167585421|ref|ZP_02377809.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
ubonensis Bu]
Length = 201
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGASQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
IIS+V +++ + CLP +LP+F+EI+L K+E S+H DI LP+GV++I H E+P +
Sbjct: 121 AIISHVATEIEVECLPADLPEFLEIDLSKIEAGQSLHAKDIVLPKGVALIAHVDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASAALPAGAV 190
>gi|53724085|ref|YP_104605.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 23344]
gi|121600473|ref|YP_991440.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
mallei SAVP1]
gi|126449568|ref|YP_001082450.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10247]
gi|161723210|ref|YP_107146.2| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei K96243]
gi|162210089|ref|YP_332166.2| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710b]
gi|167718014|ref|ZP_02401250.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei DM98]
gi|167737031|ref|ZP_02409805.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 14]
gi|167814140|ref|ZP_02445820.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 91]
gi|167822665|ref|ZP_02454136.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 9]
gi|167844236|ref|ZP_02469744.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei B7210]
gi|167892746|ref|ZP_02480148.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 7894]
gi|167901242|ref|ZP_02488447.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei NCTC 13177]
gi|167909460|ref|ZP_02496551.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 112]
gi|167917488|ref|ZP_02504579.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei BCC215]
gi|237810771|ref|YP_002895222.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei MSHR346]
gi|254181866|ref|ZP_04888463.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655]
gi|254187800|ref|ZP_04894312.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237]
gi|254201692|ref|ZP_04908056.1| 50S ribosomal protein L25 [Burkholderia mallei FMH]
gi|254207026|ref|ZP_04913377.1| 50S ribosomal protein L25 [Burkholderia mallei JHU]
gi|254296082|ref|ZP_04963539.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e]
gi|68053085|sp|Q62FC2.1|RL25_BURMA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223666|sp|A3MQB4.1|RL25_BURM7 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223667|sp|A1UZN7.1|RL25_BURMS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|52427508|gb|AAU48101.1| ribosomal protein L25 [Burkholderia mallei ATCC 23344]
gi|121229283|gb|ABM51801.1| 50S ribosomal protein L25 [Burkholderia mallei SAVP1]
gi|126242438|gb|ABO05531.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10247]
gi|147747586|gb|EDK54662.1| 50S ribosomal protein L25 [Burkholderia mallei FMH]
gi|147752568|gb|EDK59634.1| 50S ribosomal protein L25 [Burkholderia mallei JHU]
gi|157805601|gb|EDO82771.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 406e]
gi|157935480|gb|EDO91150.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pasteur 52237]
gi|184212404|gb|EDU09447.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1655]
gi|237505924|gb|ACQ98242.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei MSHR346]
Length = 204
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 181 ASATIPAGAV-SDEAAAGEGE 200
>gi|416938560|ref|ZP_11934294.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
sp. TJI49]
gi|325524744|gb|EGD02726.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
sp. TJI49]
Length = 201
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+EISPAVKL+S
Sbjct: 61 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEISPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I+S+V +++ + CLP LP+F+E++L K+E S+H DI LP+GV++ H E+P +
Sbjct: 121 AIVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHAKDIALPKGVTLTAHVDAENPVV 180
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 181 ASATVPAGAV 190
>gi|421478199|ref|ZP_15925966.1| ribosomal protein L25, Ctc-form [Burkholderia multivorans CF2]
gi|400225057|gb|EJO55242.1| ribosomal protein L25, Ctc-form [Burkholderia multivorans CF2]
Length = 205
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 142/190 (74%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFERK++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERKEQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E+SPAVKL+S
Sbjct: 65 DLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAEVSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V +++ + CLP LP+F+E++L K+E SIH DI LP GV++ H E+P I
Sbjct: 125 AVVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSIHAKDIALPNGVALTAHVDAENPVI 184
Query: 180 ATAIIPVNTL 189
A+A IP +
Sbjct: 185 ASATIPAGAV 194
>gi|76578961|gb|ABA48436.1| ribosomal protein L25, Ctc-form [Burkholderia pseudomallei 1710b]
Length = 223
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 20 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 79
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 80 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 139
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 140 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 199
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 200 ASATIPAGAV-SDEAAAGEGE 219
>gi|126454225|ref|YP_001064867.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106a]
gi|134279781|ref|ZP_01766493.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305]
gi|217420309|ref|ZP_03451815.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576]
gi|226199547|ref|ZP_03795104.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9]
gi|242314590|ref|ZP_04813606.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b]
gi|251767336|ref|ZP_02266847.2| 50S ribosomal protein L25 [Burkholderia mallei PRL-20]
gi|403517240|ref|YP_006651373.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei BPC006]
gi|68053086|sp|Q63XL9.1|RL25_BURPS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893348|sp|Q3JW87.2|RL25_BURP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|52208574|emb|CAH34510.1| ribosomal L25p family protein [Burkholderia pseudomallei K96243]
gi|126227867|gb|ABN91407.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106a]
gi|134248981|gb|EBA49063.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 305]
gi|217397613|gb|EEC37629.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 576]
gi|225928428|gb|EEH24458.1| 50S ribosomal protein L25 [Burkholderia pseudomallei Pakistan 9]
gi|242137829|gb|EES24231.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1106b]
gi|243063117|gb|EES45303.1| 50S ribosomal protein L25 [Burkholderia mallei PRL-20]
gi|403072883|gb|AFR14463.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei BPC006]
Length = 208
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 65 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 125 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 184
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 185 ASATIPAGAV-SDEAAAGEGE 204
>gi|254251379|ref|ZP_04944697.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158]
gi|124893988|gb|EAY67868.1| 50S ribosomal protein L25 [Burkholderia dolosa AUO158]
Length = 206
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 142/190 (74%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N+E SPAVKL+S
Sbjct: 65 DLEVAGKSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFLNAETSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+V +++ + CLP LP+F+E++L K+E S+H DI LP GV+++ H E+P I
Sbjct: 125 AVISHVATEIEVECLPAALPEFLEVDLSKIEAGQSVHAKDIALPNGVALVAHIDAENPVI 184
Query: 180 ATAIIPVNTL 189
A+A +P +
Sbjct: 185 ASATVPAGAV 194
>gi|413963739|ref|ZP_11402966.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
sp. SJ98]
gi|413929571|gb|EKS68859.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
sp. SJ98]
Length = 205
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 148/202 (73%), Gaps = 2/202 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER K+GT SR LR GK PGI+YGG D + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSKQGTGASRRLRNSGKTPGIVYGGETDVQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +K+LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL+
Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLSG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE-EDPTI 179
+IS+V+++L + CLP +LP+F+EI+L K+E ++H DI LP+GVS+ S E E+P +
Sbjct: 121 AVISHVVTELEVECLPADLPEFLEIDLAKIEAGQTMHAKDIPLPKGVSLTVSVEAENPVV 180
Query: 180 ATAIIPVNTLESDNNSSIEKEK 201
A+A IP + S+ E +K
Sbjct: 181 ASATIPAAVV-SEGTGEAEGDK 201
>gi|126439855|ref|YP_001057621.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 668]
gi|166223668|sp|A3N5K0.1|RL25_BURP6 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|126219348|gb|ABN82854.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 668]
Length = 204
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEVAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 61 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 121 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 181 ASATIPAGAV-SDEAAAGEGE 200
>gi|124385169|ref|YP_001027484.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10229]
gi|238561329|ref|ZP_00442185.2| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4]
gi|254175111|ref|ZP_04881772.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399]
gi|254196454|ref|ZP_04902878.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13]
gi|254357505|ref|ZP_04973779.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280]
gi|386863010|ref|YP_006275959.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1026b]
gi|418398031|ref|ZP_12971653.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 354a]
gi|418537678|ref|ZP_13103313.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1026a]
gi|418544994|ref|ZP_13110263.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1258a]
gi|418552056|ref|ZP_13116952.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1258b]
gi|418558038|ref|ZP_13122612.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 354e]
gi|124293189|gb|ABN02458.1| 50S ribosomal protein L25 [Burkholderia mallei NCTC 10229]
gi|148026569|gb|EDK84654.1| 50S ribosomal protein L25 [Burkholderia mallei 2002721280]
gi|160696156|gb|EDP86126.1| 50S ribosomal protein L25 [Burkholderia mallei ATCC 10399]
gi|169653197|gb|EDS85890.1| 50S ribosomal protein L25 [Burkholderia pseudomallei S13]
gi|238524791|gb|EEP88222.1| 50S ribosomal protein L25 [Burkholderia mallei GB8 horse 4]
gi|385345756|gb|EIF52450.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1258b]
gi|385347659|gb|EIF54310.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1258a]
gi|385349594|gb|EIF56161.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1026a]
gi|385363800|gb|EIF69558.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 354e]
gi|385367227|gb|EIF72786.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 354a]
gi|385660138|gb|AFI67561.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
pseudomallei 1026b]
Length = 240
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 148/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 37 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 96
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 97 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 156
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P I
Sbjct: 157 AVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHAKDIALPNGVALTAHVDAENPVI 216
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 217 ASATIPAGAV-SDEAAAGEGE 236
>gi|393775374|ref|ZP_10363688.1| 50S ribosomal protein l25/general stress protein ctc [Ralstonia sp.
PBA]
gi|392717951|gb|EIZ05511.1| 50S ribosomal protein l25/general stress protein ctc [Ralstonia sp.
PBA]
Length = 206
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 143/188 (76%), Gaps = 1/188 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG+ +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPGIIYGGSAEPKLIELDHNALFHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK E VLLR+FQ+H +K +VLH DFQRVD KIHVKVPLHF+N+E +P VK+
Sbjct: 61 DMEVAGKAEKVLLRDFQMHPFKPMVLHIDFQRVDANAKIHVKVPLHFLNTETAPGVKVGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++ ++L +SCLP +LP+FIE++L +E+ S+HLSD+KLP+GVS + H EE+P I
Sbjct: 121 GIVNHIANELEVSCLPADLPEFIEVDLGALELGQSLHLSDLKLPKGVSAVQHGGEENPAI 180
Query: 180 ATAIIPVN 187
+ +P
Sbjct: 181 VSISLPAG 188
>gi|73540047|ref|YP_294567.1| 50S ribosomal protein L25 [Ralstonia eutropha JMP134]
gi|109893384|sp|Q476G0.1|RL25_RALEJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|72117460|gb|AAZ59723.1| LSU ribosomal protein L25P [Ralstonia eutropha JMP134]
Length = 203
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 140/185 (75%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG DP I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAADPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK E LLR FQ+H +K LVLH DFQRV KIHVKVPLHF+N E +P VKL
Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++++++DL +SCLP +LP+FIE+++ MEV ++HL+D+KLP+GV+V+ +E+P IA
Sbjct: 121 GLVNHIVNDLEVSCLPADLPEFIEVDVGNMEVGQTLHLTDLKLPKGVTVVTHGDENPAIA 180
Query: 181 TAIIP 185
+ +P
Sbjct: 181 SISLP 185
>gi|307728381|ref|YP_003905605.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Burkholderia
sp. CCGE1003]
gi|307582916|gb|ADN56314.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. CCGE1003]
Length = 205
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 144/201 (71%), Gaps = 1/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR+ Q H +++LVLH DFQRVD KK+H KVPLHF+N E +PAVKL+S
Sbjct: 61 DLEIGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDATKKLHTKVPLHFMNQETNPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+V+++L I CLP LP+FIE++L K+E S+H DI LP GVS++ H E+P +
Sbjct: 121 AVISHVVNELEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVSLVAHVEAENPVV 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + + ++ E E
Sbjct: 181 ASATIPAGAVSESDAAAAEGE 201
>gi|339324542|ref|YP_004684235.1| 50S ribosomal protein L25 [Cupriavidus necator N-1]
gi|338164699|gb|AEI75754.1| 50S ribosomal protein L25 [Cupriavidus necator N-1]
Length = 205
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 139/189 (73%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LE+ GK E LLR FQ+H +K LVLH DFQRV KIHVKVPLHF+N E +P VKL
Sbjct: 61 ELEVAGKSEQALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I++++++DL +SCLP +LP+FIE++L E+N ++HLSDIKLP+GV+VI +++P IA
Sbjct: 121 GIVNHIVNDLEVSCLPADLPEFIEVDLAAAELNQTLHLSDIKLPKGVTVITHGDDNPAIA 180
Query: 181 TAIIPVNTL 189
+ P +
Sbjct: 181 SISQPAGAV 189
>gi|113866401|ref|YP_724890.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia
eutropha H16]
gi|122947171|sp|Q0KEP9.1|RL25_RALEH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|113525177|emb|CAJ91522.1| LSU ribosomal protein L25 [Ralstonia eutropha H16]
Length = 205
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 140/189 (74%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LE+ GK E LLR FQ+H +K LVLH DFQRV KIHVKVPLHF+N E +P VKL
Sbjct: 61 ELEVAGKSEQALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I++++++DL +SCLP +LP+FIE++L +E+N ++HLSDIKLP+GV+VI +++P +A
Sbjct: 121 GIVNHILNDLEVSCLPADLPEFIEVDLAAVELNQTVHLSDIKLPKGVTVITHGDDNPAVA 180
Query: 181 TAIIPVNTL 189
+ P +
Sbjct: 181 SISQPAGAV 189
>gi|254262121|ref|ZP_04953175.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a]
gi|254220810|gb|EET10194.1| 50S ribosomal protein L25 [Burkholderia pseudomallei 1710a]
Length = 208
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 147/201 (73%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H K PLHF+N+E SPAVKL+S
Sbjct: 65 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKAPLHFLNAETSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ I CLP +LP+F+E++L +E S+H DI LP GV++ H E+P I
Sbjct: 125 AVVSHVVTEIEIECLPADLPEFLEVDLSXIEAGQSLHAKDIALPNGVALTAHVDAENPVI 184
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + SD ++ E E
Sbjct: 185 ASATIPAGAV-SDEAAAGEGE 204
>gi|323524671|ref|YP_004226824.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Burkholderia
sp. CCGE1001]
gi|407712050|ref|YP_006832615.1| 50S ribosomal protein L25 [Burkholderia phenoliruptrix BR3459a]
gi|323381673|gb|ADX53764.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. CCGE1001]
gi|407234234|gb|AFT84433.1| large subunit ribosomal protein L25 [Burkholderia phenoliruptrix
BR3459a]
Length = 205
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 145/201 (72%), Gaps = 1/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR+ Q H +++LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL+S
Sbjct: 61 DLEIGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+V+++L I CLP LP+FIE++L K+E S+H DI LP GV+++ H E+P +
Sbjct: 121 AVISHVVNELEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVEAENPVV 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + + ++ E E
Sbjct: 181 ASATIPAGAVSESDAAAAEGE 201
>gi|300692631|ref|YP_003753626.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum PSI07]
gi|299079691|emb|CBJ52368.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum PSI07]
gi|344168270|emb|CCA80543.1| 5S rRNA binding 50S ribosomal subunit protein L25 [blood disease
bacterium R229]
Length = 203
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 147/200 (73%), Gaps = 1/200 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYGG +P + ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKLVELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GKVE LLR+FQLH +K+LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H+SD+KLP+GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTVHISDLKLPKGVTILTHGGDENPAV 180
Query: 180 ATAIIPVNTLESDNNSSIEK 199
A +P + + +K
Sbjct: 181 ANLSVPAGEVSAAAAEGGDK 200
>gi|427399529|ref|ZP_18890767.1| ribosomal protein L25, Ctc-form [Massilia timonae CCUG 45783]
gi|425721291|gb|EKU84204.1| ribosomal protein L25, Ctc-form [Massilia timonae CCUG 45783]
Length = 195
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 105/185 (56%), Positives = 141/185 (76%), Gaps = 1/185 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AF R ++GT SR LR G+ PGIIYGG + P I+++ N +YHALKKE FH S+L
Sbjct: 1 MKVVAFNRTQQGTGASRRLRNAGQTPGIIYGGTEAPALIALDGNALYHALKKEAFHGSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR+FQ+HAYK+LVLHADFQRVDT K IH KV LHF+N+EISPAVKL+
Sbjct: 61 DLEIDGKTQQVLLRDFQMHAYKQLVLHADFQRVDTSKPIHTKVTLHFVNAEISPAVKLSG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I+S+V++++ +SCLP LP+FIE++L K+E SIH D+ LP GV+ + + ++ TI
Sbjct: 121 AIVSHVLNEVEVSCLPGQLPEFIEVDLSKLEAGQSIHTGDLVLPEGVTAL-THGQNLTIV 179
Query: 181 TAIIP 185
T IP
Sbjct: 180 TTSIP 184
>gi|421746701|ref|ZP_16184478.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
necator HPC(L)]
gi|409774740|gb|EKN56317.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
necator HPC(L)]
Length = 203
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 145/200 (72%), Gaps = 1/200 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVIAFERSVQGTGASRRLRNAGKTPGIIYGGTAEPKMIELDHNALFHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G E LLR FQ+H +K LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DLEVGGTTEKALLRAFQMHPFKPLVLHVDFQRVSATEKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
II++++++L +SCLP +LP+FIE+++ +E+ ++HLSD+KLP+GV+ I +++P +A
Sbjct: 121 GIINHILNELEVSCLPGDLPEFIEVDMGAVELGQTVHLSDLKLPQGVTPITHGDDNPAVA 180
Query: 181 TAIIPVNTLESDNNSSIEKE 200
T +P + S+ S E E
Sbjct: 181 TVALPAGGV-SEAASEGEGE 199
>gi|344173546|emb|CCA88713.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
syzygii R24]
Length = 207
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 143/188 (76%), Gaps = 1/188 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYGG +P + ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKLVELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GKVE LLR+FQLH +K+LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H+SD+KLP+GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTVHISDLKLPKGVTILTHGGDENPAV 180
Query: 180 ATAIIPVN 187
A +P
Sbjct: 181 ANLSVPAG 188
>gi|170691505|ref|ZP_02882670.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
graminis C4D1M]
gi|170143710|gb|EDT11873.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
graminis C4D1M]
Length = 205
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 143/201 (71%), Gaps = 1/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQRVD KK+H KVPLHF+N E +PAVKL S
Sbjct: 61 DLEVGGKSQQVLLRDVQYHPFRQLVLHVDFQRVDATKKLHTKVPLHFMNQESNPAVKLAS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+VI+++ + CLP LP+FIE++L K+E S+H DI LP GVS++ H E+P +
Sbjct: 121 AVISHVINEIEVECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVSLVAHVDAENPVV 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + + +S E E
Sbjct: 181 ASATIPAGAVSESDAASAEGE 201
>gi|257140316|ref|ZP_05588578.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis E264]
gi|109893350|sp|Q2T1B8.2|RL25_BURTA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
Length = 208
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 149/201 (74%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 5 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H KVPLHF+N+E SPAVKL+S
Sbjct: 65 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLHFLNAESSPAVKLSS 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ + CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P +
Sbjct: 125 AVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHAKDIVLPNGVALTPHVDAENPVV 184
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + S+ ++ E E
Sbjct: 185 ASATIPAGAV-SEEAAAGEGE 204
>gi|284159402|ref|YP_441031.3| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis E264]
gi|83654462|gb|ABC38525.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
thailandensis E264]
Length = 223
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 149/201 (74%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER+++GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 20 MKVVAFERQQQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 79
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK+H KVPLHF+N+E SPAVKL+S
Sbjct: 80 DLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKKLHTKVPLHFLNAESSPAVKLSS 139
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V++++ + CLP +LP+F+E++L K+E S+H DI LP GV++ H E+P +
Sbjct: 140 AVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHAKDIVLPNGVALTPHVDAENPVV 199
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
A+A IP + S+ ++ E E
Sbjct: 200 ASATIPAGAV-SEEAAAGEGE 219
>gi|188591108|ref|YP_001795708.1| 50S ribosomal protein l25/general stress protein ctc [Cupriavidus
taiwanensis LMG 19424]
gi|226736303|sp|B2AGT7.1|RL25_CUPTR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170938002|emb|CAP62986.1| 5S rRNA binding 50S RIBOSOMAL SUBUNIT PROTEIN L25 [Cupriavidus
taiwanensis LMG 19424]
Length = 205
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 140/189 (74%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGAAEPKMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK E LLR FQ+H +K LVLH DFQRV KIHVKVPLHF+N E +P VKL
Sbjct: 61 DLEVAGKSEKALLRAFQMHPFKPLVLHVDFQRVSANDKIHVKVPLHFMNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++++++DL +SCLP +LP+FIE+++ ME+ ++HLSD+KLP+GV+VI +++P IA
Sbjct: 121 GLVNHIVNDLEVSCLPADLPEFIEVDVGAMELGQTLHLSDLKLPKGVTVITHGDDNPAIA 180
Query: 181 TAIIPVNTL 189
+ P +
Sbjct: 181 SISQPAGAV 189
>gi|386334668|ref|YP_006030839.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia
solanacearum Po82]
gi|334197118|gb|AEG70303.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia
solanacearum Po82]
Length = 202
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 144/192 (75%), Gaps = 1/192 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYGG +P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKMIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK E LLR+FQLH +K+LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKSEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H+SD+KLP+GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHISDLKLPKGVTILTHGGDENPAV 180
Query: 180 ATAIIPVNTLES 191
A +P + +
Sbjct: 181 ANISVPAGEVSA 192
>gi|17545113|ref|NP_518515.1| 50S ribosomal protein L25 [Ralstonia solanacearum GMI1000]
gi|71153161|sp|Q8Y2E2.1|RL25_RALSO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|17427404|emb|CAD13922.1| putative 50s ribosomal protein l25 (general stress protein ctc)
[Ralstonia solanacearum GMI1000]
Length = 206
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 142/188 (75%), Gaps = 1/188 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYG +P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GKVE LLR+FQLH +K+LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H+SD+KLP+GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISDLKLPKGVTIVTHGGDENPAV 180
Query: 180 ATAIIPVN 187
A +P
Sbjct: 181 ANISVPAG 188
>gi|83746829|ref|ZP_00943876.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551]
gi|207742239|ref|YP_002258631.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum IPO1609]
gi|421899870|ref|ZP_16330233.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum MolK2]
gi|83726414|gb|EAP73545.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551]
gi|206591076|emb|CAQ56688.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum MolK2]
gi|206593627|emb|CAQ60554.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum IPO1609]
Length = 203
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 142/188 (75%), Gaps = 1/188 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYGG +P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKMIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK E LLR+FQLH +K+LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKSEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H+SD+KLP+GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTLHISDLKLPKGVTILTHGGDENPAV 180
Query: 180 ATAIIPVN 187
A +P
Sbjct: 181 ANISVPAG 188
>gi|300705252|ref|YP_003746855.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia
solanacearum CFBP2957]
gi|421889572|ref|ZP_16320597.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum K60-1]
gi|299072916|emb|CBJ44272.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum CFBP2957]
gi|378965094|emb|CCF97345.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum K60-1]
Length = 203
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 142/188 (75%), Gaps = 1/188 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYGG +P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGGGAEPKMIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK E LLR+FQLH +K+LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKSEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQENAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H+SD+KLP+GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHISDLKLPKGVTILTHGGDENPAV 180
Query: 180 ATAIIPVN 187
A +P
Sbjct: 181 ANISVPAG 188
>gi|445494493|ref|ZP_21461537.1| 50S ribosomal protein L25 [Janthinobacterium sp. HH01]
gi|444790654|gb|ELX12201.1| 50S ribosomal protein L25 [Janthinobacterium sp. HH01]
Length = 210
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 146/187 (78%), Gaps = 1/187 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AF+R+ +G+ SR LR G+ PGIIYGG + PV IS++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFKRELQGSGASRRLRNSGQTPGIIYGGTEAPVTISLDHNALYHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI G + VLLR+FQ+HAYK+LVLHADFQRVD KK+H+KV LHF N+++SPAVKL+
Sbjct: 61 DLEIDGVTQQVLLRDFQVHAYKQLVLHADFQRVDASKKVHMKVALHFANADVSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IS+V +++ +SCLPK+LP+F+ ++L ++V S+H++D+ LP GV+ + + + TIA
Sbjct: 121 ATISHVANEIEVSCLPKDLPEFVTVDLSTIDVGHSLHIADLVLPAGVTAV-THGSNLTIA 179
Query: 181 TAIIPVN 187
TA +P
Sbjct: 180 TASVPAG 186
>gi|295675403|ref|YP_003603927.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. CCGE1002]
gi|295435246|gb|ADG14416.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. CCGE1002]
Length = 205
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER ++GT SR LR GK PGI+YG D I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSQQGTGASRRLRNSGKTPGIVYGAGADTQLIELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQRVD KK+H KVPLHF+N E +PAVKL+S
Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPLHFLNQETNPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+VI+++ I CLP LP+FIE++L K+E S+H DI LP GV+++ H E+P +
Sbjct: 121 AVISHVINEIEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVDAENPVV 180
Query: 180 ATAIIP 185
A A IP
Sbjct: 181 AAATIP 186
>gi|187927356|ref|YP_001897843.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia
pickettii 12J]
gi|241661895|ref|YP_002980255.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia
pickettii 12D]
gi|309779943|ref|ZP_07674697.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA]
gi|404394538|ref|ZP_10986341.1| 50S ribosomal protein L25 [Ralstonia sp. 5_2_56FAA]
gi|226736355|sp|B2UER5.1|RL25_RALPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|187724246|gb|ACD25411.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia
pickettii 12J]
gi|240863922|gb|ACS61583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia
pickettii 12D]
gi|308921302|gb|EFP66945.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA]
gi|348616617|gb|EGY66117.1| 50S ribosomal protein L25 [Ralstonia sp. 5_2_56FAA]
Length = 208
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 143/188 (76%), Gaps = 1/188 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYG +P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GKVE LLR+FQLH +K+LVLH DFQRV ++KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSAKEKIHVKVPLHFLNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H++D+KLP+GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHIADLKLPKGVTILTHGGDENPAV 180
Query: 180 ATAIIPVN 187
A +P
Sbjct: 181 ANISVPAG 188
>gi|299068047|emb|CBJ39261.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum CMR15]
Length = 206
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK P IIYG +P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPAIIYGAGAEPKLIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GKVE LLR+FQLH +K+LVLH DFQRV +KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVAGKVEKALLRDFQLHPFKQLVLHVDFQRVSATEKIHVKVPLHFLNQETAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
I++++++D+ +SCLP +LP+FIE++L +E+ ++H+SD+KL +GV+++ H +E+P +
Sbjct: 121 GIVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISDLKLSKGVTIVTHGGDENPAV 180
Query: 180 ATAIIPVNTLES 191
A +P + +
Sbjct: 181 ANISVPAGEVSA 192
>gi|312797356|ref|YP_004030278.1| 50S ribosomal protein L25 [Burkholderia rhizoxinica HKI 454]
gi|312169131|emb|CBW76134.1| LSU ribosomal protein L25P [Burkholderia rhizoxinica HKI 454]
Length = 205
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 141/199 (70%), Gaps = 1/199 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER ++GT SR LR GK PGI+YG +P I ++HN +YHAL KE FHSSIL
Sbjct: 1 MKVVAFERSQQGTGASRRLRNAGKTPGIVYGAGTEPKLIELDHNALYHALNKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI G E VLLR+ Q H +++LVLH DFQRVD + KI VKVPLH++N E SPAVKL
Sbjct: 61 DLEIAGATEQVLLRDVQYHPFRRLVLHVDFQRVDAKTKITVKVPLHYMNQEGSPAVKLGG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+I++V++++ +SCLP NLP+FIE++L E+N S+H D+KLP GV + H +E+P I
Sbjct: 121 GVITHVLNEIEVSCLPGNLPEFIEVDLANFELNQSLHAKDVKLPAGVELTPHVEQENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIE 198
+A +P + + S E
Sbjct: 181 VSATLPAGAVSDEAGESSE 199
>gi|209519642|ref|ZP_03268432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. H160]
gi|209499928|gb|EDZ99993.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. H160]
Length = 206
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER ++GT SR LR GK PGI+YG D I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSQQGTGASRRLRNSGKTPGIVYGAGADTQLIELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQRVD KK+H KVPLHF+N E +PAVKL+S
Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPLHFMNQESNPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+V++++ I CLP LP+FIE++L K+E S+H DI LP GV+++ H E+P +
Sbjct: 121 AVISHVLNEIEIECLPSALPEFIEVDLAKIEAGQSVHAKDIPLPAGVALVAHVDAENPVV 180
Query: 180 ATAIIP 185
A A IP
Sbjct: 181 AAATIP 186
>gi|374368068|ref|ZP_09626123.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
basilensis OR16]
gi|373100399|gb|EHP41465.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
basilensis OR16]
Length = 198
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 138/185 (74%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNAGKTPGIIYGGAAEPKMIELDHNALFHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK E LLR FQ+H +K LVLH DFQRV KIHVKVPLHF+N E +P VKL
Sbjct: 61 DIEVEGKAEKALLRAFQMHPFKPLVLHVDFQRVSATDKIHVKVPLHFMNQENAPGVKLGH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I+++++++L +SCLP +LP+FIE++L E+ ++HLSD+KLP+GVS I +E+P IA
Sbjct: 121 GIVNHIMNELEVSCLPADLPEFIEVDLGNAELGQTLHLSDVKLPKGVSAITHGDENPAIA 180
Query: 181 TAIIP 185
+ +P
Sbjct: 181 SISLP 185
>gi|186475083|ref|YP_001856553.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
phymatum STM815]
gi|226736291|sp|B2JCN8.1|RL25_BURP8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|184191542|gb|ACC69507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
phymatum STM815]
Length = 203
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 141/200 (70%), Gaps = 2/200 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERNLQGTGASRRLRNSGKAPGIVYGAG-EPQLIELDHNALWHALKKEAFHSSIL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LE+ GK + VLLR+ Q H +++LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL
Sbjct: 60 ELEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQETNPAVKLGG 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
IIS+VI+++ I CLP LP+FIE++L K+E S+H +DI LP GV+++ H E+P I
Sbjct: 120 AIISHVINEIEIECLPAALPEFIEVDLAKIEAGQSLHATDIALPAGVALVAHLVAENPVI 179
Query: 180 ATAIIPVNTLESDNNSSIEK 199
+A IP + + EK
Sbjct: 180 VSAPIPAGAQSEEAAAEGEK 199
>gi|326318320|ref|YP_004235992.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323375156|gb|ADX47425.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 210
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 141/187 (75%), Gaps = 1/187 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK VLLR+ Q H YK+LVLH DFQRVD + K+H+KVPLHF +E SPAVK++
Sbjct: 61 DMELAGKTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFSGAEESPAVKIDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
C+++ V ++L +SC+P +LP+FI ++L K+E S+HL DIKLPRGVS V+ ++++P +
Sbjct: 121 CMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKLPRGVSAVVRGSQQNPVL 180
Query: 180 ATAIIPV 186
+ + PV
Sbjct: 181 VSVVTPV 187
>gi|91781712|ref|YP_556918.1| 50S ribosomal protein L25 [Burkholderia xenovorans LB400]
gi|122970734|sp|Q145X3.1|RL25_BURXL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91685666|gb|ABE28866.1| LSU ribosomal protein L25P [Burkholderia xenovorans LB400]
Length = 207
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL+S
Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFLNQETNPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+VI+++ I CLP LP+F+E++L +E S+H DIKLP GV+++ H E+P I
Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVTLVAHVEAENPVI 180
Query: 180 ATAIIP 185
A A IP
Sbjct: 181 AAATIP 186
>gi|330818353|ref|YP_004362058.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3]
gi|327370746|gb|AEA62102.1| 50S ribosomal protein L25 [Burkholderia gladioli BSR3]
Length = 204
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 146/201 (72%), Gaps = 2/201 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK GI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERTLQGTGASRRLRNAGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQRVD KK+H KVP+HF+N+E+SPAVKL+S
Sbjct: 61 DLEVAGKSQNVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVHFLNAEVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
++S+V+ +L I CLP LP+F+E++L K+E S+H DI LP GVS++ H E+P I
Sbjct: 121 AVVSHVVVELDIECLPAALPEFLEVDLSKLEAGQSVHAKDIVLPNGVSLVAHVDAENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
ATA IP + SD ++ E E
Sbjct: 181 ATATIPAGAV-SDEAAAGEGE 200
>gi|187922591|ref|YP_001894233.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
phytofirmans PsJN]
gi|226736292|sp|B2SXG4.1|RL25_BURPP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|187713785|gb|ACD15009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
phytofirmans PsJN]
Length = 206
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL+S
Sbjct: 61 DLEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFMNQESNPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+VI+++ I CLP LP+F+E++L +E S+H DIKLP GVS++ H E+P +
Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVSLVAHVEAENPVV 180
Query: 180 ATAIIP 185
A A IP
Sbjct: 181 AAATIP 186
>gi|456064249|ref|YP_007503219.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [beta
proteobacterium CB]
gi|455441546|gb|AGG34484.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [beta
proteobacterium CB]
Length = 212
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 139/187 (74%), Gaps = 1/187 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGIIYGG I ++HN ++HAL+KE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIIYGGKDAATVIELDHNALFHALRKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR++Q+H +K LVLH DFQRV +K+H++VPLHFIN++ S AVKL
Sbjct: 61 DLEIGGKAQKVLLRDYQMHPFKPLVLHIDFQRVSASEKVHMRVPLHFINADTSAAVKLQG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
+IS++ ++L +SCLP +LP+FIE++L K+EV IH DI LP+GV+ V+H +E+P +
Sbjct: 121 AVISHISTELEVSCLPADLPEFIEVDLNKIEVGHGIHAKDIALPKGVTLVLHVEQENPVL 180
Query: 180 ATAIIPV 186
A A IP
Sbjct: 181 ANARIPA 187
>gi|237745396|ref|ZP_04575877.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS]
gi|229378870|gb|EEO28961.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS]
Length = 205
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 137/196 (69%), Gaps = 4/196 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IA+ R + GT SR LR G PGI+YGG +PV I ++HN +++ALK+E FHSSIL
Sbjct: 1 MKVIAYTRAEIGTGASRRLRAAGMAPGIVYGGTSEPVNIKLDHNALFYALKREAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK E VLLR+FQ+HAYK LVLH DFQRVD +KI VKVPLHFIN + SPA K S
Sbjct: 61 DLEIDGKAEKVLLRDFQVHAYKPLVLHVDFQRVDANQKITVKVPLHFINEDASPAAK--S 118
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++ + ++L ISCLP NLP FIE++L ++V +IHLSD+KLP GVS E P ++
Sbjct: 119 GVVHHAATELEISCLPGNLPAFIEVDLANLDVGQTIHLSDLKLPEGVSATSHDESQPIVS 178
Query: 181 TAIIPVNTLESDNNSS 196
+ N ES +S
Sbjct: 179 ATV--ANVAESAEETS 192
>gi|395760759|ref|ZP_10441428.1| 50S ribosomal protein L25/general stress protein Ctc
[Janthinobacterium lividum PAMC 25724]
Length = 201
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IAF+R+ +G+ SR LR G PGI+YGG + PV +S++HN +YHALKKE FHSSIL
Sbjct: 1 MKVIAFKRELQGSGASRRLRISGLTPGIVYGGAEGPVLVSLDHNALYHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI G + VLLR+FQ+HAYK+LVLHADFQRVD+++ +HVKV LHFIN+++SPAVKL+
Sbjct: 61 DLEIDGVSQQVLLRDFQVHAYKQLVLHADFQRVDSKQAVHVKVALHFINADVSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IS+V +++ +SCLP LP+FI ++L ++V S+H+ D+ LP GV+ + + + TIA
Sbjct: 121 ATISHVANEIEVSCLPGQLPEFINVDLSNIDVGHSLHIGDLVLPAGVTAV-THGANLTIA 179
Query: 181 TAIIPVN 187
TA +P
Sbjct: 180 TASVPAG 186
>gi|385207047|ref|ZP_10033915.1| ribosomal protein L25, Ctc-form [Burkholderia sp. Ch1-1]
gi|385179385|gb|EIF28661.1| ribosomal protein L25, Ctc-form [Burkholderia sp. Ch1-1]
Length = 205
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + + ++HN ++HALKKE FHSSIL
Sbjct: 1 MKVVAFERSLQGTGASRRLRNSGKTPGIVYGAGAETQLVELDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LE+ GK + VLLR+ Q H +++LVLH DFQRVD +KK+H KVPLHF+N E +PAVKL S
Sbjct: 61 ELEVAGKSQQVLLRDVQYHPFRQLVLHVDFQRVDAKKKLHTKVPLHFLNQESNPAVKLAS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS+VI+++ I CLP LP+F+E++L +E S+H DIKLP GV+++ H E+P I
Sbjct: 121 AVISHVINEIEIECLPSALPEFLEVDLATIEAGHSVHAKDIKLPAGVTLVAHVEAENPVI 180
Query: 180 ATAIIP 185
A A IP
Sbjct: 181 AAATIP 186
>gi|145590100|ref|YP_001156697.1| 50S ribosomal protein L25 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189042364|sp|A4T069.1|RL25_POLSQ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|145048506|gb|ABP35133.1| LSU ribosomal protein L25P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 213
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 139/187 (74%), Gaps = 1/187 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG + I ++HN ++HAL+KE FHSSIL
Sbjct: 1 MKVVAFERSVQGTGASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR++Q+H +K LVLH DFQRV +K+H++VPLHF N++ S AVKL
Sbjct: 61 DLEIDGKAQKVLLRDYQMHPFKPLVLHIDFQRVSASEKVHMRVPLHFTNADTSAAVKLQG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
+IS+++++L +SCLP +LP+F+E++L K+EV IH DI LP+GV+ V+H +E+P +
Sbjct: 121 AVISHILTELEVSCLPADLPEFVEVDLAKIEVGHGIHAKDIALPKGVTLVLHVEQENPVL 180
Query: 180 ATAIIPV 186
A A IP
Sbjct: 181 ANARIPA 187
>gi|296134847|ref|YP_003642089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas
intermedia K12]
gi|410692376|ref|YP_003622997.1| putative 50S ribosomal protein L25 (General stress protein CTC)
rplY [Thiomonas sp. 3As]
gi|294338800|emb|CAZ87134.1| putative 50S ribosomal protein L25 (General stress protein CTC)
rplY [Thiomonas sp. 3As]
gi|295794969|gb|ADG29759.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas
intermedia K12]
Length = 205
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 140/185 (75%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR+ GK PGIIYGG + P I ++HN +YHALKKE FHSS+L
Sbjct: 1 MKVVAFERSLQGTGASRRLRRAGKTPGIIYGGEQAPQMIELDHNALYHALKKEQFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LEI GK VLLR++Q+H +K+LVLH DFQRVD KI +KVPLHF +E SPAVKL+
Sbjct: 61 QLEIAGKSSQVLLRDYQMHPFKQLVLHVDFQRVDAGHKISMKVPLHFTGAENSPAVKLSH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++++V++++ +SCLP LP+FIE++L ++ ++ S+H++D+KLP+GVSV+ ++P +
Sbjct: 121 GLVNHVMTEVEVSCLPSELPEFIEVDLSELVLHQSVHVNDLKLPKGVSVLTHGVDNPAVV 180
Query: 181 TAIIP 185
T P
Sbjct: 181 TVSPP 185
>gi|56476200|ref|YP_157789.1| 50S ribosomal protein L25 [Aromatoleum aromaticum EbN1]
gi|68053040|sp|Q5P723.1|RL25_AZOSE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56312243|emb|CAI06888.1| 50S Ribosomal protein L25 [Aromatoleum aromaticum EbN1]
Length = 201
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 138/185 (74%), Gaps = 2/185 (1%)
Query: 1 MKII--AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSS 58
M+I+ A +R ++GT SR LR+ G++PGIIYG + D I+++HN +YH LKKETFH+S
Sbjct: 1 MQIVFKATQRVEQGTGASRRLRRAGQIPGIIYGADTDAQAITVDHNELYHLLKKETFHAS 60
Query: 59 ILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
+L +E+ G V+LR+ Q H YK+ VLH DFQR+D ++H+KVPLHFIN++ +PAVKL
Sbjct: 61 VLMIELEGAKHTVVLRDVQWHPYKQQVLHLDFQRIDAGHQLHLKVPLHFINNDTNPAVKL 120
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
C+IS+ +++L I+CLP NLP+FIE++L+ +E SIH+S +KLP GV +H E DP
Sbjct: 121 GGCMISHTMTELDIACLPANLPEFIEVDLQSLEAGQSIHVSQLKLPEGVEAVHHGEGDPV 180
Query: 179 IATAI 183
+ATA+
Sbjct: 181 VATAL 185
>gi|163858319|ref|YP_001632617.1| 50S ribosomal protein L25 [Bordetella petrii DSM 12804]
gi|226736285|sp|A9I6W5.1|RL25_BORPD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|163262047|emb|CAP44349.1| 50S ribosomal protein L25 [Bordetella petrii]
Length = 207
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 139/185 (75%), Gaps = 1/185 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG+ P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK E VLLR+ Q HAYK VLH DFQRVD + +H KVPLHFIN E SPAVKL+S
Sbjct: 61 QMQLDGKEEAVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPLHFINGENSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
IIS+V+++L I+CLP LP++IE++L + S+HLSD+KLP+GV+ V H ++ +P +
Sbjct: 121 AIISHVVTELEITCLPAALPQYIEVDLGNLLGGGSVHLSDVKLPKGVTYVAHGSDANPVL 180
Query: 180 ATAII 184
A+A++
Sbjct: 181 ASALV 185
>gi|421486681|ref|ZP_15934217.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
piechaudii HLE]
gi|400194986|gb|EJO27986.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
piechaudii HLE]
Length = 202
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 137/186 (73%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK IA R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFIATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEIYG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+++ G K E VLLR+ Q HAYK VLH DFQRVD + + KVPLHF+N+EISPAVKL+
Sbjct: 61 QMQLEGAKEEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEISPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPT 178
IIS+V ++L I+CLPK LP+FIE++L + SIHL+DIKLP GV+ + H E++P
Sbjct: 121 GAIISHVTTELEITCLPKALPQFIEVDLTNILAGASIHLADIKLPMGVTYVPHGGEDNPL 180
Query: 179 IATAII 184
+A AI+
Sbjct: 181 LAAAIV 186
>gi|390568417|ref|ZP_10248723.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
terrae BS001]
gi|420253485|ref|ZP_14756536.1| ribosomal protein L25, Ctc-form [Burkholderia sp. BT03]
gi|389939583|gb|EIN01406.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
terrae BS001]
gi|398052056|gb|EJL44353.1| ribosomal protein L25, Ctc-form [Burkholderia sp. BT03]
Length = 203
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 141/200 (70%), Gaps = 2/200 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GT SR LR GK PGI+YG +P I ++HN ++HALKKE FH+SIL
Sbjct: 1 MKVVAFERNLQGTGASRRLRNSGKTPGIVYGAG-EPQLIELDHNALFHALKKEAFHASIL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+ Q H +++++LH DFQRVD KK+H KVPLHF+N E +PAVK
Sbjct: 60 DLEVAGKSQQVLLRDVQYHPFRQIILHVDFQRVDASKKLHTKVPLHFMNQESNPAVKTGG 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
IIS+VI+++ I CLP LP+FIE++L K+E S+H +DI LP GV+++ H E+P I
Sbjct: 120 AIISHVINEIEIECLPAALPEFIEVDLVKIEAGQSLHATDIVLPAGVALVAHLVAENPVI 179
Query: 180 ATAIIPVNTLESDNNSSIEK 199
+A +P + ++ EK
Sbjct: 180 VSAPVPAGAQSEEASAEGEK 199
>gi|293607609|ref|ZP_06689943.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter
piechaudii ATCC 43553]
gi|292814042|gb|EFF73189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter
piechaudii ATCC 43553]
Length = 216
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 136/186 (73%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK IA R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 14 MKFIATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 73
Query: 61 NLEIYG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+++ G K E VLLR+ Q HAYK VLH DFQRVD + + KVPLHF+N+EISPAVKL
Sbjct: 74 QMQLEGSKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEISPAVKLA 133
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPT 178
+IS+V ++L I+CLPK LP+FIE++L + SIHL+DIKLP GV+ + H E++P
Sbjct: 134 GAMISHVTTELEITCLPKALPQFIEVDLANILAGASIHLADIKLPMGVTYVPHGGEDNPL 193
Query: 179 IATAII 184
+A AI+
Sbjct: 194 LAAAIV 199
>gi|358635736|dbj|BAL23033.1| 50S ribosomal protein L25 [Azoarcus sp. KH32C]
Length = 200
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 136/180 (75%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R ++GT SR LR+ G+VPGIIYGG + + IS++HN IYH L+KE FH+S+L++E+
Sbjct: 7 ASKRVEQGTGASRRLRRAGQVPGIIYGGAAEVLAISVDHNEIYHLLRKEAFHASVLSVEL 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+LR+ Q H +++ VLH DFQR+D +K+H+KVPLHF+N ++SPAVK+ C+IS
Sbjct: 67 DGAKQPVVLRDAQWHPFRQQVLHLDFQRIDASQKMHLKVPLHFVNGDVSPAVKVGGCMIS 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ +++ I CLP NLP+F+E++L+ +E SIHLS I LP GV ++H E DP +ATA+I
Sbjct: 127 HTVTEADIQCLPGNLPEFLEVDLKGLEAGQSIHLSQITLPAGVEIVHHGEGDPVVATALI 186
>gi|337280989|ref|YP_004620461.1| 50S ribosomal protein L25 [Ramlibacter tataouinensis TTB310]
gi|334732066|gb|AEG94442.1| 50S ribosomal protein L25-like protein [Ramlibacter tataouinensis
TTB310]
Length = 235
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 137/186 (73%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR GK PGI+YGG P I ++HN ++HALK+E FHS+IL
Sbjct: 1 MKFVAFERAKQGTGASRRLRNTGKTPGIVYGGEGQPQLIELDHNALWHALKREAFHSTIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VLLR+ Q+H +K+LV H DFQRVD K+H+KVPLH+ N+E S AVK
Sbjct: 61 EMEVAGKTSKVLLRDVQMHPFKQLVQHIDFQRVDARTKLHMKVPLHYKNAEESQAVKFEH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
C++++V+S+L ISCLP +LP+FIE++L ++ TS+HL+DI+LP+GV+ + +++P +
Sbjct: 121 CVVNHVMSELNISCLPGDLPEFIEVDLSGLKKGTSLHLNDIQLPKGVNAVTGGKKNPVLV 180
Query: 181 TAIIPV 186
+ + V
Sbjct: 181 SVVATV 186
>gi|171464201|ref|YP_001798314.1| 50S ribosomal protein L25/general stress protein Ctc
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|226736348|sp|B1XS65.1|RL25_POLNS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|171193739|gb|ACB44700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 214
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++AFER +GTS SR LR GK PGI+YG + I ++HN ++HAL+KE FHSSIL
Sbjct: 1 MKVVAFERSVQGTSASRRLRNSGKTPGIVYGSKDPALVIELDHNALFHALRKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR++Q+H +K LVLH DFQRV KK+H++VPLHF N++ S AVKL
Sbjct: 61 DLEIGGKTQKVLLRDYQMHPFKPLVLHIDFQRVSATKKVHMRVPLHFTNADTSAAVKLQG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS++ ++L +S LP +LP+FIE++L K+EV IH DI LP+GV++I H +E+P +
Sbjct: 121 AVISHIATELEVSYLPADLPEFIEVDLAKIEVGHGIHAKDIALPKGVTLILHVEQENPVL 180
Query: 180 ATAIIP 185
A A IP
Sbjct: 181 ANARIP 186
>gi|120612258|ref|YP_971936.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
citrulli AAC00-1]
gi|166223655|sp|A1TT74.1|RL25_ACIAC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120590722|gb|ABM34162.1| LSU ribosomal protein L25P [Acidovorax citrulli AAC00-1]
Length = 210
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 130/170 (76%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK VLLR+ Q H YK+LVLH DFQRVD + K+H+KVPLHF +E SPAVK++
Sbjct: 61 DMELAGKTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFTGAEESPAVKIDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
C+++ V ++L +SC+P +LP+FI ++L K+E S+HL DIKLPRGVS +
Sbjct: 121 CMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIKLPRGVSPV 170
>gi|33595506|ref|NP_883149.1| 50S ribosomal protein L25 [Bordetella parapertussis 12822]
gi|33599891|ref|NP_887451.1| 50S ribosomal protein L25 [Bordetella bronchiseptica RB50]
gi|410418667|ref|YP_006899116.1| 50S ribosomal protein L25 [Bordetella bronchiseptica MO149]
gi|412339839|ref|YP_006968594.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 253]
gi|427813134|ref|ZP_18980198.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 1289]
gi|427821056|ref|ZP_18988119.1| 50S ribosomal protein L25 [Bordetella bronchiseptica D445]
gi|427823707|ref|ZP_18990769.1| 50S ribosomal protein L25 [Bordetella bronchiseptica Bbr77]
gi|71153123|sp|Q7WNY3.1|RL25_BORBR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153125|sp|Q7W180.1|RL25_BORPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|33565584|emb|CAE40227.1| 50S ribosomal protein L25 [Bordetella parapertussis]
gi|33567488|emb|CAE31401.1| 50S ribosomal protein L25 [Bordetella bronchiseptica RB50]
gi|408445962|emb|CCJ57627.1| 50S ribosomal protein L25 [Bordetella bronchiseptica MO149]
gi|408769673|emb|CCJ54457.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 253]
gi|410564134|emb|CCN21675.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 1289]
gi|410572056|emb|CCN20311.1| 50S ribosomal protein L25 [Bordetella bronchiseptica D445]
gi|410588972|emb|CCN04035.1| 50S ribosomal protein L25 [Bordetella bronchiseptica Bbr77]
Length = 204
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 136/186 (73%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEI-YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
N+ I GK E VLLR+ Q HAYK V+H DFQRVD + +H KVPLHFIN+E+SPAVKL+
Sbjct: 61 NMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVDANQALHTKVPLHFINAEVSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV-IHSTEEDPT 178
IIS+V+++L I+CLP LP+FIE+NL + SIHL+DIKLP+GV+ H + +P
Sbjct: 121 GAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGDTNPL 180
Query: 179 IATAII 184
IA A++
Sbjct: 181 IAAAVV 186
>gi|359799752|ref|ZP_09302305.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
arsenitoxydans SY8]
gi|359362178|gb|EHK63922.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
arsenitoxydans SY8]
Length = 202
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 134/185 (72%), Gaps = 2/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG+ P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFTATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEIYG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+++ G K E VLLR+ Q HAYK VLH DFQRVD + + KVPLHF+N+E+SPAVKL+
Sbjct: 61 QMQLDGAKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEVSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPT 178
IIS+V ++L I+CLP LP FIEINL + S+HL+DIKLP GV+ + H EE+P
Sbjct: 121 GAIISHVTTELEITCLPSALPPFIEINLADVLAGGSVHLADIKLPIGVTYVPHGGEENPL 180
Query: 179 IATAI 183
+A A+
Sbjct: 181 LAAAV 185
>gi|395006685|ref|ZP_10390489.1| ribosomal protein L25, Ctc-form [Acidovorax sp. CF316]
gi|394315251|gb|EJE52062.1| ribosomal protein L25, Ctc-form [Acidovorax sp. CF316]
Length = 210
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 130/170 (76%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGTAEPQLIEIDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G VLLR+ Q H YK+LVLH DFQRVD + K+H+KVPLHF +E SPAVK++
Sbjct: 61 DMEVAGSTSKVLLRDVQYHPYKQLVLHIDFQRVDAKTKLHMKVPLHFSGAEESPAVKVDH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
C+++ V+++L +SC+P +LP+FI ++L K++ +S+HL DIKLP+GV+ +
Sbjct: 121 CLVNPVVNELDVSCMPSDLPEFIAVDLSKLQKGSSLHLKDIKLPKGVTAV 170
>gi|372487715|ref|YP_005027280.1| 50S ribosomal protein L25 [Dechlorosoma suillum PS]
gi|359354268|gb|AEV25439.1| ribosomal protein L25, Ctc-form [Dechlorosoma suillum PS]
Length = 200
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 135/177 (76%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R +GT SR LR+ GKVPGI+YGG P+ I ++HN IY AL+KE FHSS++NL I
Sbjct: 7 ADKRNDQGTGASRRLRRAGKVPGIVYGGTAAPISIEVDHNAIYLALRKEAFHSSLINLNI 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK E VLLR++Q H YK +VLH DFQRVD +K+H KVPLHF+N++I+P VKL I+S
Sbjct: 67 DGKKESVLLRDYQAHPYKAIVLHVDFQRVDPNQKLHTKVPLHFVNADIAPGVKLGGGIVS 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+V++++ ++CL +LP+FIE++L+ + SIH++D+KLP+GV+++ +++P +AT
Sbjct: 127 HVLNEVEVTCLAADLPEFIEVDLKDLAAGHSIHIADVKLPKGVALVQHGQDNPVVAT 183
>gi|422319804|ref|ZP_16400877.1| 50S ribosomal protein L25 [Achromobacter xylosoxidans C54]
gi|317405479|gb|EFV85788.1| 50S ribosomal protein L25 [Achromobacter xylosoxidans C54]
Length = 204
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 132/181 (72%), Gaps = 2/181 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG+ P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFTATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEIYG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+++ G K E VLLR+ Q HAYK VLH DFQRVD + + KVPLHF+N+E+SPAVKL+
Sbjct: 61 QMQLEGAKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEVSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPT 178
IIS+V ++L I+CLP LP+FIE+NL + SIHL+DIKLP GV+ + H EE+P
Sbjct: 121 GAIISHVATELEITCLPSALPQFIEVNLADILAGASIHLADIKLPMGVTYVPHGGEENPL 180
Query: 179 I 179
+
Sbjct: 181 L 181
>gi|319945392|ref|ZP_08019653.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia
mirabilis ATCC 51599]
gi|319741385|gb|EFV93811.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Lautropia
mirabilis ATCC 51599]
Length = 215
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 136/182 (74%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+I A ERK GTS SR LR+ +VPGI+YGG P++++++HN +YHAL+ E FHSSIL
Sbjct: 1 MQISAQERKDVGTSASRRLRRANQVPGIVYGGEAAPIQVALDHNTLYHALRVEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++I GK + VLLRN Q H YK+ VLH DFQRV +KI VKVPLHFIN E SPAVK
Sbjct: 61 DMDIDGKKQRVLLRNVQWHPYKQQVLHVDFQRVAANQKITVKVPLHFINGENSPAVKQTK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++++V++++ + LPK+LP+FIE++L ++ + SIHLS IKLP+GV+ + + DP +A
Sbjct: 121 AVVNHVMTEIEVQVLPKDLPEFIEVDLAELAMEHSIHLSSIKLPKGVTAVVAPGTDPVLA 180
Query: 181 TA 182
+A
Sbjct: 181 SA 182
>gi|365092330|ref|ZP_09329478.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. NO-1]
gi|363415454|gb|EHL22581.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. NO-1]
Length = 211
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 128/167 (76%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGTTEPQLIELDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G VLLR+ Q H +K+LVLH DFQRVD + K+H+KVPLHF +E SPAVK++
Sbjct: 61 DMEVAGTTSKVLLRDVQYHPFKQLVLHIDFQRVDEKTKLHMKVPLHFSGAEESPAVKVDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
C+I+ V+++L ++C+P +LP+FI ++L K+E TS+HL DIKLP+GV
Sbjct: 121 CMINPVVNELDVTCMPSDLPEFIAVDLSKLEKGTSLHLKDIKLPKGV 167
>gi|119897045|ref|YP_932258.1| 50S ribosomal protein L25/general stress protein Ctc [Azoarcus sp.
BH72]
gi|166223661|sp|A1K3G6.1|RL25_AZOSB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|119669458|emb|CAL93371.1| 50S ribosomal protein L25 [Azoarcus sp. BH72]
Length = 200
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 132/178 (74%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ +G+S SR LR+ +VPGIIYG KD I+++HN +YH LKKE FH+S+L++ +
Sbjct: 7 ATKREGQGSSASRRLRRAAQVPGIIYGAGKDAQPITLDHNELYHLLKKEAFHASVLSINV 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G E V+LR+ Q HAYK+ VLH DFQRVD +K+H+KVPLHF+N + +PAVKL II+
Sbjct: 67 EGAKETVVLRDTQWHAYKQQVLHIDFQRVDASQKLHLKVPLHFVNGDNAPAVKLGGNIIA 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+V+++L + CLP +LP+FIE++L +E SIH+S +KLP GV +H E DP +A+A
Sbjct: 127 HVMTELDVQCLPSSLPEFIEVDLAALEAGQSIHVSQLKLPAGVEAVHHGEGDPVVASA 184
>gi|410471584|ref|YP_006894865.1| 50S ribosomal protein L25 [Bordetella parapertussis Bpp5]
gi|408441694|emb|CCJ48181.1| 50S ribosomal protein L25 [Bordetella parapertussis Bpp5]
Length = 204
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEI-YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
N+ + GK E V LR+ Q HAYK V+H DFQRVD + +H KVPLHF+N+E+SPAVKL+
Sbjct: 61 NMVLKGGKTEEVRLRSIQWHAYKPQVMHVDFQRVDANQALHTKVPLHFVNAEVSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV-IHSTEEDPT 178
IIS+V+++L I+CLP LP+FIE+NL + SIHL+DIKLP+GV+ H + +P
Sbjct: 121 GAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGDTNPL 180
Query: 179 IATAII 184
IA A++
Sbjct: 181 IAAAVV 186
>gi|329917506|ref|ZP_08276486.1| LSU ribosomal protein L25p [Oxalobacteraceae bacterium IMCC9480]
gi|327544536|gb|EGF30044.1| LSU ribosomal protein L25p [Oxalobacteraceae bacterium IMCC9480]
Length = 176
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 130/153 (84%), Gaps = 1/153 (0%)
Query: 39 ISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKK 98
IS++HN +YHALKKETFHSSIL+LEI GKVE VLLR+FQ+HAYK+LVLHADFQRVD +K
Sbjct: 3 ISLDHNALYHALKKETFHSSILDLEIDGKVEKVLLRDFQVHAYKQLVLHADFQRVDASQK 62
Query: 99 IHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHL 158
IHVKVPLHFIN E SPAVK+++ IIS+V+S+L ++CLP +LP+F+ ++L +E+ +SIHL
Sbjct: 63 IHVKVPLHFINGEASPAVKMSAGIISHVVSELEVTCLPADLPEFLTVDLGALEIGSSIHL 122
Query: 159 SDIKLPRGVS-VIHSTEEDPTIATAIIPVNTLE 190
+D+++P GV+ VIH +++PTIA A +P +E
Sbjct: 123 ADLQMPNGVTPVIHGGDDNPTIAAASVPAGRVE 155
>gi|33594045|ref|NP_881689.1| 50S ribosomal protein L25 [Bordetella pertussis Tohama I]
gi|384205348|ref|YP_005591087.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
pertussis CS]
gi|408416590|ref|YP_006627297.1| 50S ribosomal protein L25 [Bordetella pertussis 18323]
gi|71153126|sp|Q7VUH2.1|RL25_BORPE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|33564119|emb|CAE43391.1| 50S ribosomal protein L25 [Bordetella pertussis Tohama I]
gi|332383462|gb|AEE68309.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
pertussis CS]
gi|401778760|emb|CCJ64214.1| 50S ribosomal protein L25 [Bordetella pertussis 18323]
Length = 208
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+ IL
Sbjct: 5 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHALIL 64
Query: 61 NLEI-YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
N+ I GK E VLLR+ Q HAYK V+H DFQRV+ + +H KVPLHFIN+E+SPAVKL+
Sbjct: 65 NMVIEGGKTEEVLLRSVQWHAYKPQVMHVDFQRVEANQALHTKVPLHFINAEVSPAVKLS 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV-IHSTEEDPT 178
IIS+V+++L I+CLP LP+FIE+NL + SIHL+DIKLP+GV+ H + +P
Sbjct: 125 GAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLADIKLPKGVTFNAHGGDTNPL 184
Query: 179 IATAII 184
IA A++
Sbjct: 185 IAAAVV 190
>gi|423014088|ref|ZP_17004809.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
xylosoxidans AXX-A]
gi|338783019|gb|EGP47388.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
xylosoxidans AXX-A]
Length = 204
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 131/181 (72%), Gaps = 2/181 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFTATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEIYG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+++ G K E VLLR+ Q HAYK VLH DFQRVD + + KVPLHF+N+E+SPAVKL+
Sbjct: 61 QMQLEGAKDEQVLLRSVQWHAYKPQVLHVDFQRVDANQALRTKVPLHFVNAEVSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPT 178
IIS+V ++L I+CLP LP+FIE+NL + SIHL+DIKLP GV+ + H EE+P
Sbjct: 121 GAIISHVANELEITCLPSALPQFIEVNLADILAGASIHLADIKLPMGVTYVPHGGEENPL 180
Query: 179 I 179
+
Sbjct: 181 L 181
>gi|311108748|ref|YP_003981601.1| 50S ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8]
gi|310763437|gb|ADP18886.1| ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8]
Length = 204
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 136/188 (72%), Gaps = 4/188 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG P+ I ++HN IYHAL+KE FH+SIL
Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIYHALRKEEFHASIL 60
Query: 61 NLEIYG--KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
+ + G K E VLLR+ Q HAYK VLH DFQRVD + +H KVP HFIN+E+SPAVKL
Sbjct: 61 QMALEGAAKEEQVLLRSVQWHAYKPQVLHVDFQRVDANQALHTKVPFHFINAEVSPAVKL 120
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDP 177
IIS+V+++L ++CLP LP+FIE++L+ + S+HL+DIKLP+GV+ + H + +P
Sbjct: 121 GGAIISHVLTELEVTCLPAALPQFIEVDLKDLLPGASVHLADIKLPKGVTYVPHGGDANP 180
Query: 178 TI-ATAII 184
+ ATA++
Sbjct: 181 LLAATAVV 188
>gi|237749455|ref|ZP_04579935.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13]
gi|229380817|gb|EEO30908.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13]
Length = 209
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 132/179 (73%), Gaps = 2/179 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MKIIA+ R + G+ SR LR G PGI+YGGN +P+ I ++HN +++ALK+E FHSSIL
Sbjct: 1 MKIIAYTRAEIGSGASRRLRAAGMAPGIVYGGNSEPLNIKLDHNALFYALKREAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR+FQ+HAYK +VLH DFQRVD +KI+VKVPLHF+N + S A K S
Sbjct: 61 DLEIDGKNQQVLLRDFQVHAYKPVVLHVDFQRVDANQKINVKVPLHFVNEDASSAKK--S 118
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ + +++L ISCLP NLP FIE++L +E+ +IHL D+KLP GV+ I E P +
Sbjct: 119 GVVHHAVTELEISCLPANLPAFIEVDLGNLEIGQTIHLGDLKLPEGVTAISHDESMPIV 177
>gi|332285374|ref|YP_004417285.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7]
gi|330429327|gb|AEC20661.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7]
Length = 207
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 132/184 (71%), Gaps = 1/184 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R KGTS SR LR G+VP I+YGG DP+ I ++HN I+HAL+KE FH+SIL
Sbjct: 1 MKFNATSRSDKGTSASRRLRHAGRVPAIVYGGTADPLSIELDHNEIFHALRKEAFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++++ GK + VLLR Q H YK VLH DFQRVD ++ I KVPLHFIN + SPAVKL+
Sbjct: 61 DMQLDGKGQQVLLRAVQWHPYKPQVLHVDFQRVDAKQTITTKVPLHFINGDASPAVKLSG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
IIS+V+++L I+CLP +LP+ IEI+L ++ +++LSDI LP+GV+ +H E D +
Sbjct: 121 QIISHVMTELEITCLPVDLPQAIEIDLGELAAGGNVYLSDITLPQGVTHTVHGAEGDLVL 180
Query: 180 ATAI 183
A A+
Sbjct: 181 AAAL 184
>gi|91787188|ref|YP_548140.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas
sp. JS666]
gi|123165230|sp|Q12E00.1|RL25_POLSJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91696413|gb|ABE43242.1| LSU ribosomal protein L25P [Polaromonas sp. JS666]
Length = 227
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 131/176 (74%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR G+ PGI+YGG +P I ++HN ++HA+KKE FH+S+L
Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGTGEPSLIELDHNALWHAIKKEAFHASVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK E VLLR+ Q+H +K+ VLH DFQRVD ++ +KVPLH+ E SPAVK+ +
Sbjct: 61 EMEMGGKTEKVLLRDLQMHPFKQQVLHIDFQRVDARTRLTMKVPLHYSGEEESPAVKVEN 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
C++++V+++L ISCLPK+LP+FI+INL ++ TS+H+ DI LP+GV + +D
Sbjct: 121 CLVNHVLTELSISCLPKDLPEFIDINLGGLKKGTSLHVKDITLPKGVKFVAKGGQD 176
>gi|74316406|ref|YP_314146.1| 50S ribosomal protein L25 [Thiobacillus denitrificans ATCC 25259]
gi|109893403|sp|Q3SLR4.1|RL25_THIDA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|74055901|gb|AAZ96341.1| Ribosomal protein L25 [Thiobacillus denitrificans ATCC 25259]
Length = 201
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++IA +R+ +GT SR LR GKVPGI+YGG+ PV+I ++HN +YHAL+KE FH+S+L
Sbjct: 3 IEVIASKRELQGTGASRRLRHAGKVPGIVYGGSTAPVQIELDHNALYHALRKEAFHASVL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + G E VLLR+ Q H YK+ VLH DFQRVD + KIHVKVPLHF+N+E+SP VKL
Sbjct: 63 SLSVDGAKESVLLRDAQWHPYKQQVLHVDFQRVDKDHKIHVKVPLHFLNAEVSPGVKLGG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+++++L + C P +LP+FIE+++ +EV SIH +D+ LP GV ++ H +E+P +
Sbjct: 123 GKPHHIVNELDVQCFPGSLPEFIEVDMGALEVGHSIHANDLVLPAGVELVAHVKQENPAV 182
Query: 180 ATAIIPVNTLE 190
A P +E
Sbjct: 183 AVIHAPKGGVE 193
>gi|89900451|ref|YP_522922.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Rhodoferax
ferrireducens T118]
gi|109893386|sp|Q21XW2.1|RL25_RHOFD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|89345188|gb|ABD69391.1| LSU ribosomal protein L25P [Rhodoferax ferrireducens T118]
Length = 223
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 134/184 (72%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR G+ PGI+YGG +P +I ++HN ++HALKKE FH+++L
Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGGAEPQQIEIDHNALWHALKKEAFHAAVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK VLLR+ Q+H +K+L+LH DFQRVD ++H+KVPLH+ E SPAVK
Sbjct: 61 DMELDGKDNKVLLRDVQMHPFKQLILHVDFQRVDASTRLHMKVPLHYSGDENSPAVKTEG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
CI ++VI+++ + CLP +LP+FI ++L ++ S+HL+D+ LP+GV+ + ++P +
Sbjct: 121 CIANHVITEIEVLCLPTDLPEFIAVDLSGLKKGASLHLADVALPKGVTAVTRGNKNPVLV 180
Query: 181 TAII 184
+ ++
Sbjct: 181 SVVV 184
>gi|121607939|ref|YP_995746.1| 50S ribosomal protein L25/general stress protein Ctc
[Verminephrobacter eiseniae EF01-2]
gi|166223729|sp|A1WGH1.1|RL25_VEREI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|121552579|gb|ABM56728.1| LSU ribosomal protein L25P [Verminephrobacter eiseniae EF01-2]
Length = 235
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 131/170 (77%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSAEPQMIELDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK + VLLR+ Q H +K+ VLH DFQRVD + ++H+KVPLH+ SE S AVK++
Sbjct: 61 DMEVAGKTDKVLLRDVQYHPFKQCVLHIDFQRVDDKTRLHMKVPLHYSGSEESNAVKVDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
C+++ ++++L ++C+P +LP+FI ++L K+E TS+HL DIKLPRGV+ +
Sbjct: 121 CMVNLIVNELDVTCMPSDLPEFIAVDLSKLEKGTSLHLKDIKLPRGVTPV 170
>gi|347820357|ref|ZP_08873791.1| 50S ribosomal protein L25/general stress protein Ctc
[Verminephrobacter aporrectodeae subsp. tuberculatae
At4]
Length = 216
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 130/170 (76%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG+ +P +I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGSVEPQRIEVDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G VLLR+ Q H YK+LVLH DFQRVD + ++H+KVPLH+ +E S AVK++
Sbjct: 61 DMELAGTTSKVLLRDVQYHPYKQLVLHIDFQRVDEKTRLHMKVPLHYSGAEESSAVKVDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
C+++ ++++L ++C+P +LP+FI ++L K+E S+HL DIKLPRGV+ +
Sbjct: 121 CMVNPIVNELDVTCMPSDLPEFIAVDLSKLEKGASLHLKDIKLPRGVAPV 170
>gi|237654284|ref|YP_002890598.1| 50S ribosomal protein L25/general stress protein Ctc [Thauera sp.
MZ1T]
gi|237625531|gb|ACR02221.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thauera sp.
MZ1T]
Length = 200
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 131/179 (73%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R +GT SR LR+ G++PGI+YGG + +SM+HN +YH L+KE FH+S+L++E+
Sbjct: 7 ATKRDAQGTGASRRLRRAGRIPGILYGGAGETQPVSMDHNELYHLLRKEAFHASVLSIEV 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + +LR+ Q H +K+ VLH DFQR+ +K+H+KVPLHF+ ++++PAVKL C+IS
Sbjct: 67 DGAKQNAVLRDVQWHPFKQQVLHLDFQRIAAGEKMHLKVPLHFVGADVAPAVKLGGCMIS 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+ I++L + CLP +LP+FIE++L +E S+H+S IKLP GV ++ E DP +ATA+
Sbjct: 127 HTINELDVQCLPTDLPEFIEVDLSALEAGQSVHVSQIKLPAGVELVQHGEGDPVVATAL 185
>gi|351730209|ref|ZP_08947900.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
radicis N35]
Length = 210
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 127/169 (75%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGTTEPQLIEVDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G VLLR+ Q H YK+LVLH DFQRVD + K+H+KVPLHF +E SPAVK++
Sbjct: 61 DMEVAGTTAKVLLRDVQYHPYKQLVLHIDFQRVDEKTKLHMKVPLHFSGAEESPAVKVDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
C+++ ++++L ++C+P +LP+FI ++L +E +S+HL IKLP+GV+
Sbjct: 121 CMVNPIVNELDVTCMPSDLPEFIAVDLSTLEKGSSLHLKSIKLPKGVTA 169
>gi|241764085|ref|ZP_04762123.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax
delafieldii 2AN]
gi|241366616|gb|EER61097.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax
delafieldii 2AN]
Length = 213
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 137/192 (71%), Gaps = 2/192 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +A+ER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAYERAKQGTGASRRLRNSGKTPGIVYGGSAEPQLIEVDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G VLLR+ Q H YK+LVLH DFQRVD + K+H+KVPLHF N+E S AVK++
Sbjct: 61 DMEVAGTTSKVLLRDVQYHPYKQLVLHIDFQRVDDKTKLHMKVPLHFSNAEESDAVKVDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI--HSTEEDPT 178
C+++ V+++L ++C+P +LP+FI ++L ++ S+HL DIKLP+GVS + +P
Sbjct: 121 CMVNPVVNELDVTCMPSDLPEFIAVDLSTLKKGVSLHLKDIKLPKGVSAVIRGGQNNNPV 180
Query: 179 IATAIIPVNTLE 190
+ + PV +E
Sbjct: 181 LVSVANPVVEVE 192
>gi|348618506|ref|ZP_08885030.1| 50S ribosomal protein L25 (General stress protein CTC) [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816231|emb|CCD29786.1| 50S ribosomal protein L25 (General stress protein CTC) [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 208
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IA R ++GT SR LR+ GK PGIIYG P I+++ N ++HAL+KE FH+SIL
Sbjct: 1 MKVIAQSRSQQGTGASRRLRRSGKTPGIIYGAGSAPQLIALDQNALFHALEKEAFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G + VLLR+ Q H +K VLH DFQRV+ EKKIH KVPLH++N EIS AVKL
Sbjct: 61 DLELDGASQPVLLRDVQRHPFKPAVLHIDFQRVEAEKKIHKKVPLHYLNQEISKAVKLGG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV-IHSTEEDPTI 179
II++V++++ I CLP +LP+FIE++L ++ S+H+ D+ LP V + ++ ++E+P I
Sbjct: 121 AIITHVMTEIEIICLPAHLPEFIEVDLSELSAGQSLHIKDVSLPSHVELALYLSQENPVI 180
Query: 180 ATAIIPVNTLESDNNSSIEKEKNNNS 205
+A +P T E+ S+ E N+ S
Sbjct: 181 LSATVPSATEEAGAESAT-SEGNDTS 205
>gi|332528605|ref|ZP_08404587.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella
gracilis ATCC 19624]
gi|332041921|gb|EGI78265.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Hylemonella
gracilis ATCC 19624]
Length = 218
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR G+ PGI+YGG +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKFVAFERAKQGTGASRRLRHTGRTPGIVYGGTVEPSLIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GK VLLR+ Q+H YK LVLH DFQRVD K+H+KVPLH+ E SPA+K +
Sbjct: 61 DMELNGKSNQVLLRDVQMHPYKPLVLHIDFQRVDANTKLHMKVPLHYSGEENSPAIK-DK 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++++++++L ISCLPK+LP+FI ++L K+ S+HL DI LP+GV+ + + +P +
Sbjct: 120 SLVNHIVTELEISCLPKDLPEFIAVDLSKLTKGASLHLKDITLPKGVTAVTHGKTNPVL 178
>gi|260219880|emb|CBA26854.1| 50S ribosomal protein L25 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 227
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 130/173 (75%), Gaps = 1/173 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR G+ PGI+YGG +P+ I ++HN ++HALKKE FHS+IL
Sbjct: 21 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGTGEPLLIELDHNALWHALKKEAFHSTIL 80
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E GK VLLR+ Q+H YK+LVLH DFQRV+ K+ ++VPLHF E SPAVK ++
Sbjct: 81 DMEFNGKESKVLLRDVQMHPYKQLVLHIDFQRVEANTKLSMRVPLHFSGQENSPAVKTDA 140
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG-VSVIHS 172
C+I++VI++L ++CLP +LP+FI ++L +E S+H++D+ LP+G V+V H
Sbjct: 141 CLINHVITELEVACLPADLPEFIAVDLSGLEKGKSLHVNDLALPKGTVAVTHG 193
>gi|239817313|ref|YP_002946223.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax
paradoxus S110]
gi|259646698|sp|C5CYZ6.1|RL25_VARPS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|239803890|gb|ACS20957.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax
paradoxus S110]
Length = 224
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 135/186 (72%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR GK PGI+YGG P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MKFVAFERAKQGTGASRRLRISGKTPGIVYGGEGKPQLIELDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G VLLR+ Q H +++LV H DFQRVD + ++H+KVPLH+ E S AVKL+
Sbjct: 61 EMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRMHMKVPLHYKGEEESDAVKLDH 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++++V+++L +SCLP +LP+FIE++L ++ N ++H++DIKLP+GV + + +P I
Sbjct: 121 NLVTHVMTELEVSCLPADLPEFIEVDLSGLKKNATLHVNDIKLPKGVKFVSHGKLNPVIV 180
Query: 181 TAIIPV 186
+A+ P+
Sbjct: 181 SAVPPL 186
>gi|407937688|ref|YP_006853329.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. KKS102]
gi|407895482|gb|AFU44691.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. KKS102]
Length = 211
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 126/167 (75%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M +AFER K+GT SR LR GK PGI+YGG +P I ++HN ++HALKKE FHSS+L
Sbjct: 1 MNFVAFERAKQGTGASRRLRNSGKTPGIVYGGAAEPQLIEVDHNALWHALKKEAFHSSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G V+LR+ Q H YK+LVLH DFQRVD + K+H+KVPLH+ +E S AVK++
Sbjct: 61 DMEVAGTTSKVVLRDVQYHPYKQLVLHIDFQRVDDKTKLHLKVPLHYSGAEESNAVKVDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
C+++ V+++L ++C+P +LP+FI ++L K+E S+HL DIKLP+GV
Sbjct: 121 CMVNPVVNELDVTCMPSDLPEFIAVDLSKLEKGASLHLKDIKLPKGV 167
>gi|451822816|ref|YP_007459090.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775616|gb|AGF46657.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 203
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 142/201 (70%), Gaps = 3/201 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R GTS SR LR G +P ++YGGN P+ I ++HN IYHAL+KE FHSS+L
Sbjct: 1 MKFNATLRSVHGTSASRRLRHNGCIPAVVYGGNIAPLNIELDHNEIYHALRKEEFHSSVL 60
Query: 61 NLEIYG--KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
+ + G K E V+LR+ Q H YK+ VLH DFQRV + I+ K+PLHF+N +ISPAVKL
Sbjct: 61 EMYMSGTNKTEQVILRSVQWHPYKQQVLHVDFQRVSANQNINTKIPLHFLNEDISPAVKL 120
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
I+S++I++L ISCLP LP+FI+I+L K+E+ SIHLSDI LP+GV V + ++ DP
Sbjct: 121 EGAIVSHIITELEISCLPSMLPQFIDIDLSKIELGKSIHLSDITLPQGV-VYNGSDIDPL 179
Query: 179 IATAIIPVNTLESDNNSSIEK 199
+A+A+ + + +N S++E+
Sbjct: 180 LASALANNDISDGENGSNVEE 200
>gi|171060169|ref|YP_001792518.1| 50S ribosomal protein L25/general stress protein Ctc [Leptothrix
cholodnii SP-6]
gi|226736334|sp|B1Y3Q0.1|RL25_LEPCP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170777614|gb|ACB35753.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Leptothrix
cholodnii SP-6]
Length = 208
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AF R+ +GT SR LR GKVPGI+YGG+ P I ++HN +YHALKKE FHSSIL
Sbjct: 1 MKFVAFARELQGTGASRRLRHGGKVPGIVYGGSGKPTSIELDHNALYHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G+ E V+LR Q+HA+K+LVLH DFQRVD +I KVPLHF+N S AVKL+
Sbjct: 61 EMELAGQSEKVVLRALQMHAFKQLVLHVDFQRVDETTRIKKKVPLHFVNEAESQAVKLDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
C+I++V+S+L I CL + LP+F+ ++L + S+H+ D+KL + V+ ++P +A
Sbjct: 121 CLINHVVSELEIECLAEKLPEFLTVDLGGLSKGQSLHVDDLKLEASIKVVTHGRKNPVVA 180
Query: 181 TAIIPV 186
T ++P+
Sbjct: 181 T-VVPI 185
>gi|334132962|ref|ZP_08506717.1| 50S ribosomal protein L25 [Methyloversatilis universalis FAM5]
gi|333441872|gb|EGK69844.1| 50S ribosomal protein L25 [Methyloversatilis universalis FAM5]
Length = 202
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 132/196 (67%), Gaps = 3/196 (1%)
Query: 7 ERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
+R +GT SR LR+ +VP IIYGG+K I+++HN I+HAL+KE FH+S+L L + G
Sbjct: 9 KRDAQGTGASRRLRRADQVPAIIYGGDKPATPITLDHNEIFHALRKEAFHASVLTLNVEG 68
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VLLR+ Q+HAYK VLH DFQRVD K+H KVP HF+N++ +P VKL I+S+V
Sbjct: 69 TKETVLLRDTQMHAYKLQVLHVDFQRVDATHKLHTKVPFHFVNADAAPGVKLQGGIVSHV 128
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIATAIIP 185
+++L + CLP LP+FIE++L + V SIH+S IKLP GV ++ H T DP +AT +P
Sbjct: 129 MNELDVQCLPSQLPEFIEVDLSGLSVGQSIHVSQIKLPAGVEALTHGT--DPVVATLTLP 186
Query: 186 VNTLESDNNSSIEKEK 201
+ + +EK
Sbjct: 187 RGAKSDEAAAEGGEEK 202
>gi|451811239|ref|YP_007447694.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|451776397|gb|AGF47396.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 202
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 140/204 (68%), Gaps = 5/204 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R GTS SR+LR G++P I+YG N P+ I ++HN IYHAL+KE FHSS+L
Sbjct: 1 MKFDATLRSVHGTSASRHLRHKGRIPAIVYGKNSSPLNIELDHNYIYHALRKEEFHSSVL 60
Query: 61 NLEIYG--KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
++ I KVE V+LR+ Q H YK+ VLH DFQRV + I+ KVPLHF+N+E SPAVKL
Sbjct: 61 SMNILDSKKVEQVILRSVQWHPYKQQVLHVDFQRVSANQNINTKVPLHFLNAETSPAVKL 120
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
II++VI++L ISCLP LP FIEI+L +E+ SIH SDI LP GVS + ++ DP
Sbjct: 121 GGAIINHVITELEISCLPAVLPPFIEIDLSNIELGNSIHFSDIILPAGVSY-NGSDPDPL 179
Query: 179 IATAIIPVNTLESDNNSSIEKEKN 202
+ATA VN D + +E++K+
Sbjct: 180 LATAF--VNEGVDDEDQKVEEDKS 201
>gi|389873391|ref|YP_006380810.1| 50S ribosomal protein L25/general stress protein Ctc [Advenella
kashmirensis WT001]
gi|388538640|gb|AFK63828.1| 50S ribosomal protein L25/general stress protein Ctc [Advenella
kashmirensis WT001]
Length = 215
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 128/184 (69%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG + I ++HN I+HAL+KE FH+S+L
Sbjct: 1 MKFEATTRSVQGSSASRRLRRAGRVPAIVYGGKGEAQSIELDHNEIFHALRKEPFHTSVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + GK + VLLR Q H+YK LVLH DFQRV + + ++P HFIN + SPAVK
Sbjct: 61 DMMLDGKKQTVLLRAVQWHSYKPLVLHVDFQRVSANEALTTRIPFHFINGDESPAVKQQG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IS+V++D+ I+CLPK+LP+FIE++L ++ N +HLSD+K+P GV + EE P +A
Sbjct: 121 ATISHVLNDIEITCLPKDLPQFIEVDLGNLQANEVVHLSDVKVPAGVEFVGVGEESPVLA 180
Query: 181 TAII 184
TA +
Sbjct: 181 TATV 184
>gi|398802329|ref|ZP_10561543.1| ribosomal protein L25, Ctc-form [Polaromonas sp. CF318]
gi|398100230|gb|EJL90470.1| ribosomal protein L25, Ctc-form [Polaromonas sp. CF318]
Length = 231
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 133/181 (73%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR G+ PGI+YGG K+P I ++HN ++HA+KKE FH+SIL
Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGAKEPTLIEIDHNALFHAIKKEAFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK + VLLR+ Q+H YK+ +LH DFQRV+ + K+ VKVP+H+ E SPAVK +
Sbjct: 61 EMELGGKEQKVLLRDLQMHPYKQQILHIDFQRVEAKTKMTVKVPVHYSGEEESPAVKTEN 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
C++++VI++L +SC P ++P+FI ++L+ ++ + +H+ DI LP+GV + +++P +
Sbjct: 121 CLVNHVITELTVSCFPADIPEFIAVDLKGLKKGSPLHIKDITLPKGVKFVAKGQDNPVLV 180
Query: 181 T 181
+
Sbjct: 181 S 181
>gi|452125963|ref|ZP_21938546.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii F627]
gi|452129325|ref|ZP_21941901.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii H558]
gi|451921058|gb|EMD71203.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii F627]
gi|451925195|gb|EMD75335.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii H558]
Length = 197
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 126/177 (71%), Gaps = 1/177 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G+VP I+YGG P+ I M+HN I+HAL+KE FH+SIL
Sbjct: 1 MKFNATARSVQGSSASRRLRRAGRVPAIVYGGTATPLNIEMDHNEIFHALRKEQFHASIL 60
Query: 61 NLEIYG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ + G K E VLLR+ Q H YK+ V+H DFQRVD + +H KVPLHFIN+E SPAVKL+
Sbjct: 61 TMALEGGKSEQVLLRSVQWHPYKQQVMHVDFQRVDANQALHTKVPLHFINAETSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
IIS+V++++ ++CLPK LP+FIE++L + S+H DI LP+GV+ H +E
Sbjct: 121 GAIISHVVTEVEVTCLPKALPQFIEVDLGNLLGGGSVHQKDIVLPKGVTFTHPNDEQ 177
>gi|451936226|ref|YP_007460080.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777149|gb|AGF48124.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 205
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 135/185 (72%), Gaps = 2/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+I A R GTS SR LR +G VP IIYGG+ P+ I ++HN IYHAL+KE FHSSIL
Sbjct: 1 MEINALLRDMHGTSASRRLRHVGGVPAIIYGGSSLPMTIELDHNEIYHALRKEKFHSSIL 60
Query: 61 NLEIYGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
N++I GK E V+LR+ Q H YK+ VLH DFQRV++ ++I +VPLHF+N +ISPAVK+
Sbjct: 61 NIKINGKDAEQVILRSVQWHPYKQQVLHIDFQRVESNQEISTRVPLHFLNEDISPAVKIG 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV-IHSTEEDPT 178
II +VI++L I+C+P LP+FI ++L + + S+HLSD+KLP GVS HS + +P
Sbjct: 121 GAIIRHVITELDITCMPALLPQFINVDLSGVSLGDSVHLSDVKLPIGVSYNSHSIDTNPL 180
Query: 179 IATAI 183
+A+AI
Sbjct: 181 LASAI 185
>gi|319795630|ref|YP_004157270.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Variovorax
paradoxus EPS]
gi|315598093|gb|ADU39159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax
paradoxus EPS]
Length = 223
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNK-DPVKISMNHNMIYHALKKETFHSSI 59
MK +AFER K+GT SR LR GK PGI+YGG P I ++HN ++HALKKE FHSSI
Sbjct: 1 MKFVAFERAKQGTGASRRLRISGKTPGIVYGGEGLQPQLIEIDHNALWHALKKEAFHSSI 60
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L +E+ G VLLR+ Q H +++LV H DFQRVD + ++H+KVPLHF E S AVK
Sbjct: 61 LEMELGGATSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRLHMKVPLHFKGEEESEAVKTA 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++++VI++L ISCLP +LP+FIE++L + N ++H++DIKLP+GV + +++P I
Sbjct: 121 HNLVNHVITELEISCLPSDLPEFIEVDLSGLTKNATLHVNDIKLPKGVKYVSHGKQNPVI 180
Query: 180 ATAIIPV 186
+A+ P+
Sbjct: 181 VSAVPPL 187
>gi|388569481|ref|ZP_10155873.1| 50S ribosomal protein L25/general stress protein Ctc
[Hydrogenophaga sp. PBC]
gi|388263230|gb|EIK88828.1| 50S ribosomal protein L25/general stress protein Ctc
[Hydrogenophaga sp. PBC]
Length = 209
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 127/178 (71%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +AFER K+GT SR LR G+ PGI++GG PV I ++HN ++HALKKE FH+SIL
Sbjct: 1 MQFVAFERAKQGTGASRRLRITGRAPGIVFGGTAAPVSIELDHNALWHALKKEAFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ GKVE VLLR+ Q H +K VLH DFQRVD + ++ KVPLHF +E SPAVKL+
Sbjct: 61 DMELGGKVEKVLLRDVQYHPFKPQVLHVDFQRVDDKTRLRKKVPLHFTGAEESPAVKLDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
C++++VI+++ I CL LP+ I ++L ++ ++H DIKLP+GV ++ +D T
Sbjct: 121 CLVNHVINEIEIECLATQLPENITVDLSQVTKGATVHAGDIKLPKGVKIVTHGRKDIT 178
>gi|424778477|ref|ZP_18205425.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
sp. HPC1271]
gi|422886627|gb|EKU29041.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
sp. HPC1271]
Length = 199
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 129/187 (68%), Gaps = 2/187 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +GT SR LR+ G+VP I+YGG++ PV I+++HN YH L+KE FH+SIL
Sbjct: 1 MKFTATSRDVQGTGASRRLRRAGQVPAIVYGGDEQPVVIALDHNETYHNLRKEAFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK E VLLR+ Q H YK+ VLH DFQRV + I KVPL+F ++SPAVKL+S
Sbjct: 61 TMELDGKAEKVLLRSVQWHPYKQQVLHVDFQRVLASQAITTKVPLNFEGGDVSPAVKLSS 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+IS+++++L I+CLP NLP I ++L M N ++HL IKLPRGV+ E +P +A
Sbjct: 121 QVISHILTELEITCLPANLPASITVDLSGMTANANVHLDSIKLPRGVTYA-GNEANPLLA 179
Query: 181 TAIIPVN 187
A +PV
Sbjct: 180 AA-LPVG 185
>gi|383756725|ref|YP_005435710.1| 50S ribosomal protein L25 [Rubrivivax gelatinosus IL144]
gi|381377394|dbj|BAL94211.1| 50S ribosomal protein L25 RplY [Rubrivivax gelatinosus IL144]
Length = 214
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK AFER +GT SR LR KVPGI+YG +P I ++HN ++ ALKKE FHSSIL
Sbjct: 1 MKFTAFERSVQGTGASRRLRNAAKVPGIVYGAG-EPKMIELDHNALFFALKKEAFHSSIL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GKVE VLLR+FQ+HA+K +V+H DFQRVD K+ KVPLHF E SPAVK +
Sbjct: 60 EMELAGKVEKVLLRDFQMHAWKPIVMHVDFQRVDETTKLRKKVPLHFEGEENSPAVKTDK 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
C++S+V +++ I CL LP+F+ I+L + N S+HLSD+KLP G+ + +P I
Sbjct: 120 CLVSHVANEIEIECLASQLPEFVTIDLSGLVKNQSLHLSDLKLPAGIKAVRHGTMNPAIV 179
Query: 181 TAIIP 185
+ P
Sbjct: 180 SVATP 184
>gi|187477047|ref|YP_785071.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
avium 197N]
gi|109893346|sp|Q2KYA2.1|RL25_BORA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115421633|emb|CAJ48143.1| 50S ribosomal protein L25 [Bordetella avium 197N]
Length = 198
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 131/185 (70%), Gaps = 2/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +GTS SR LR+ G+VP I+YGG P+ I ++HN I+HAL+KE FH+SIL
Sbjct: 1 MKFNATLRSVQGTSASRRLRRAGRVPAIVYGGTAAPLNIELDHNEIFHALRKEQFHASIL 60
Query: 61 NLEIYGKV-ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ + G E VLLR+ Q H +K+ VLH DFQRVD + +H KVPLHF+N+E SPAVKL+
Sbjct: 61 TMALEGGANEQVLLRSVQWHPFKQQVLHVDFQRVDANQALHTKVPLHFVNAETSPAVKLS 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
IIS+V++++ ++CLP++LP+FIE++L + SIH DI LP+GV+ H +E I
Sbjct: 121 GAIISHVVTEVEVTCLPQSLPQFIEVDLGNLLGGGSIHQKDIVLPKGVTFTHPNDEQ-VI 179
Query: 180 ATAII 184
+A++
Sbjct: 180 VSAVV 184
>gi|71909343|ref|YP_286930.1| 50S ribosomal protein L25 [Dechloromonas aromatica RCB]
gi|109893357|sp|Q479M1.1|RL25_DECAR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71848964|gb|AAZ48460.1| LSU ribosomal protein L25P [Dechloromonas aromatica RCB]
Length = 203
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 125/172 (72%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R +GT SR LR KVPGI+YGG P I ++HN + LKKE FHSSI+NL I
Sbjct: 7 AQARTLQGTGASRRLRHAAKVPGIVYGGAAAPQSIEVDHNDLLLKLKKEAFHSSIINLII 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK E VLLR+ Q+HAYK LVLH DFQRVD ++HVKVPLHF+N E++P VKLN +++
Sbjct: 67 DGKKEQVLLRDTQVHAYKPLVLHVDFQRVDATHELHVKVPLHFVNEEVAPGVKLNGGLVN 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+V++++ I CL +LP+FIE++L +++ SIHLS +KLP+GV ++H T +D
Sbjct: 127 HVMTEVDIQCLAGDLPEFIEVDLSSLKIGGSIHLSQLKLPKGVKIVHHTADD 178
>gi|303256347|ref|ZP_07342363.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47]
gi|330999042|ref|ZP_08322767.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis
YIT 11859]
gi|302861076|gb|EFL84151.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium 1_1_47]
gi|329575784|gb|EGG57310.1| ribosomal protein L25, Ctc-form [Parasutterella excrementihominis
YIT 11859]
Length = 217
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 129/184 (70%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A RK +GT SR LR+ K+PGI+YGG I ++HN I+HAL+KE FH+SIL
Sbjct: 1 MKFTAVTRKAQGTGASRRLRRAEKLPGIVYGGKVAATPIELDHNEIFHALRKEKFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ + GK E VLLR+FQ+H YK VLH DFQR+ +++I + VPLHF+ E SPA+ ++
Sbjct: 61 EMVLDGKSERVLLRSFQMHPYKPQVLHIDFQRISADEQIRMNVPLHFVGEEKSPAITIDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ +++L +SCLP LP+FI ++L + V+ +H+SD+ LP GV+ + EEDPT+A
Sbjct: 121 TNVNHALTELLVSCLPDQLPEFITVDLSGLTVDKPVHVSDLVLPEGVTPVLKPEEDPTVA 180
Query: 181 TAII 184
+A++
Sbjct: 181 SAVV 184
>gi|291614810|ref|YP_003524967.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans
lithotrophicus ES-1]
gi|291584922|gb|ADE12580.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans
lithotrophicus ES-1]
Length = 220
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A RK +GT SR LRK +VPGI+YG + I ++HN +Y+AL+ E FH+SIL
Sbjct: 3 IEISATTRKAQGTGASRRLRKTNRVPGIVYGAG-EATMIELDHNTLYYALRNEAFHASIL 61
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ GK + VLLR+FQ+H +++ V H DFQRVD +KK+H+KVPLHF+N++++P VK+
Sbjct: 62 SLELDGKKQSVLLRDFQMHPFRQQVQHIDFQRVDAKKKVHMKVPLHFLNADVAPGVKVGG 121
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IIS+V+++L I CLP +LP IE++L +E+ S+H+SD+KLP+GV + +A
Sbjct: 122 GIISHVLNELEIVCLPADLPAAIEVDLSGLELGHSVHVSDVKLPKGVELAGHHHASDAVA 181
Query: 181 TAIIPVNTLE 190
T +P +E
Sbjct: 182 TVQVPRGHVE 191
>gi|422348782|ref|ZP_16429674.1| ribosomal protein L25, Ctc-form [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658834|gb|EKB31696.1| ribosomal protein L25, Ctc-form [Sutterella wadsworthensis
2_1_59BFAA]
Length = 203
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 129/187 (68%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M IIA R +GT SR LR+ K+PGI+YGGN I + HN I++AL+KE FH+SIL
Sbjct: 1 MNIIATTRNVQGTGASRRLRRADKLPGIVYGGNLPATPIELEHNPIFYALRKEKFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK ELV+LR FQ+H YK V+H DFQR++ +K+ ++VPLHF E SPAVK++
Sbjct: 61 TMELDGKEELVVLRAFQMHPYKPQVMHIDFQRINPNEKVTMRVPLHFQGEEESPAVKVSK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
CI+S+ +S + ++C+PK LP+FI ++L K+E + H S ++LP G+ V + ED +A
Sbjct: 121 CIVSHAVSAIEVTCMPKELPEFITVDLSKLEAGQTFHASMLQLPEGIEVHAKSGEDIVLA 180
Query: 181 TAIIPVN 187
T +PV
Sbjct: 181 TVALPVE 187
>gi|319940809|ref|ZP_08015148.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B]
gi|319805691|gb|EFW02472.1| 50S ribosomal protein L25 [Sutterella wadsworthensis 3_1_45B]
Length = 214
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 130/187 (69%), Gaps = 4/187 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IA R +GT SR LR+ K+PGIIYGG I + HN I+ AL+KE FH+SIL
Sbjct: 1 MKVIATTRTTQGTGASRRLRRADKLPGIIYGGKNPATPIELEHNPIFFALRKEKFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK ELV+LR+FQ+H YK+ V+H DFQR+ ++ + ++VPLHF E+SPAVK++
Sbjct: 61 TMELDGKEELVVLRDFQMHPYKQQVMHIDFQRIAPDEVVTMRVPLHFSGEELSPAVKIDK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
CIIS + + ++CLP++LP+FI ++L KME T++H +D+ +P GV ++ D IA
Sbjct: 121 CIISRATAYVEVACLPRDLPEFIAVDLSKMETGTTLHATDLVVPEGVKMV----TDSVIA 176
Query: 181 TAIIPVN 187
+ I PV
Sbjct: 177 SVIQPVE 183
>gi|394990503|ref|ZP_10383335.1| hypothetical protein SCD_02931 [Sulfuricella denitrificans skB26]
gi|393790768|dbj|GAB72974.1| hypothetical protein SCD_02931 [Sulfuricella denitrificans skB26]
Length = 208
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 139/186 (74%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A R +GT SR LR+ G++P ++YGG KD I ++H +++ LK E FH++IL
Sbjct: 3 IEISATARTLQGTGASRRLRRTGRIPAVVYGGEKDAAAIELDHKEVFYKLKNEAFHATIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + GK E VLLR++Q+H ++ +V+H DFQRV+ ++KIH+KVPLHF N++I+P VKL++
Sbjct: 63 SLNLDGKAEQVLLRDYQMHPFRPVVMHVDFQRVNPKEKIHIKVPLHFANADIAPGVKLSA 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE-EDPTI 179
I+S++I+++ ++CLPK+LP+FIE++L + SIHLS++KL +G+ +I T+ ED +
Sbjct: 123 GIVSHIITEVDVACLPKDLPEFIEVDLANLAAGHSIHLSELKLGKGIELIPLTKGEDLAV 182
Query: 180 ATAIIP 185
AT IP
Sbjct: 183 ATITIP 188
>gi|398810407|ref|ZP_10569226.1| ribosomal protein L25, Ctc-form [Variovorax sp. CF313]
gi|398083039|gb|EJL73771.1| ribosomal protein L25, Ctc-form [Variovorax sp. CF313]
Length = 227
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 133/186 (71%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR GK PGI+YGG+ P I ++HN ++HALKKE FH+S+L
Sbjct: 1 MKFVAFERAKQGTGASRRLRISGKTPGIVYGGDTQPQLIEIDHNALWHALKKEAFHASVL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+EI G V VLLR+ Q H +++LV H DFQRVD + ++ +KVP+HF E S AVK++
Sbjct: 61 EMEIGGAVSKVLLRDVQYHPFRQLVQHIDFQRVDAKTRMTMKVPVHFKGEEESEAVKIDL 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++++V ++L ++CLP +LP+FIE++L ++ N ++ L DIKLP+GV + + +P +A
Sbjct: 121 NLVNHVTTELELNCLPSDLPEFIEVDLSGLKKNGTVTLKDIKLPKGVKWVSHGKVNPVLA 180
Query: 181 TAIIPV 186
+A+ P
Sbjct: 181 SAVSPA 186
>gi|319779110|ref|YP_004130023.1| 50S ribosomal protein L25 [Taylorella equigenitalis MCE9]
gi|317109134|gb|ADU91880.1| LSU ribosomal protein L25p [Taylorella equigenitalis MCE9]
Length = 212
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 141/209 (67%), Gaps = 8/209 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G++PGI+YGG +P+ I ++HN I+HAL+K+ FHSS+L
Sbjct: 1 MKFTAKARSVQGSSASRRLRREGRLPGIVYGGKGEPLNIDLDHNEIFHALRKQEFHSSLL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK E VLLR Q HAYK VLH DF RV+ + I KVPL+FIN E+SPAVKL+
Sbjct: 61 EMDLDGKTETVLLRAVQWHAYKPQVLHIDFLRVERGQPITTKVPLNFINDEVSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS +++++ ++CLPK+LP I ++L ++E ++ +HLS IK P GV H+ EED +
Sbjct: 121 NLISKIVTEIEVTCLPKDLPSEIVVDLSELEADSVVHLSSIKPPAGVEFTGHNPEEDMVL 180
Query: 180 ATAIIPVNTLESDN-------NSSIEKEK 201
A+A P ES + SS E+EK
Sbjct: 181 ASASSPREVTESADPVNGPAPESSSEEEK 209
>gi|339484791|ref|YP_004696577.1| 50S ribosomal protein L25 [Nitrosomonas sp. Is79A3]
gi|338806936|gb|AEJ03178.1| 50S ribosomal protein L25 [Nitrosomonas sp. Is79A3]
Length = 207
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A +R +G SR LR GKVP IIYGG ++P I M+HN ++H LK+E FH+SIL
Sbjct: 3 IEISADKRTLQGKGASRRLRGSGKVPAIIYGGEQEPQSIEMDHNDLFHKLKQEAFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + GK E VLLR+ Q+H +K VLH DFQRVD +KIH+KVPLHFIN+E +P VK +
Sbjct: 63 SLSVAGKKEQVLLRDIQMHPFKHQVLHVDFQRVDKNQKIHMKVPLHFINAENAPGVKTSG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT-I 179
I++++++++ ISCLP +LP+FI ++L ++ ++HLSD+ LP+GV I D + +
Sbjct: 123 GIVTHILTEVDISCLPDDLPEFISVDLSELTAGHTLHLSDLVLPKGVETIALARGDNSPV 182
Query: 180 ATAIIPVNTL 189
AT +IP + L
Sbjct: 183 ATIVIPRSAL 192
>gi|332527357|ref|ZP_08403413.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax
benzoatilyticus JA2]
gi|332111766|gb|EGJ11746.1| 50S ribosomal protein L25/general stress protein Ctc [Rubrivivax
benzoatilyticus JA2]
Length = 214
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A+ER +GT SR LR KVPGI+YG +P I ++HN ++ ALKKE FHSSIL
Sbjct: 1 MKFTAYERSVQGTGASRRLRNAAKVPGIVYGAG-EPKMIELDHNALFFALKKEAFHSSIL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GKVE VLLR+FQ+HA+K +V+H DFQRVD ++ KVPLHF E SPAVK +
Sbjct: 60 EMELAGKVEKVLLRDFQMHAWKPIVMHVDFQRVDETTRLRKKVPLHFEGEENSPAVKTDK 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
C++S+V +++ I CL LP+F+ I+L + N S+HL+D+KLP G+ + +P I
Sbjct: 120 CLVSHVATEIEIECLASQLPEFVTIDLSGLVKNQSLHLNDLKLPAGIKAVRHGTLNPAIV 179
Query: 181 TAIIP 185
+P
Sbjct: 180 AVTMP 184
>gi|378824022|ref|ZP_09846578.1| ribosomal protein L25, Ctc-form [Sutterella parvirubra YIT 11816]
gi|378597160|gb|EHY30492.1| ribosomal protein L25, Ctc-form [Sutterella parvirubra YIT 11816]
Length = 199
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 131/186 (70%), Gaps = 4/186 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+IA R+ +GTS SR LR+ K+PGIIYGG + I + HN I++AL+KE FH+SIL
Sbjct: 1 MKVIATTRQTQGTSASRRLRRADKLPGIIYGGTQPATPIELEHNPIFYALRKEKFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK ELV+LR FQ+H YK V+H DFQR+ ++K+ ++VPLHF +E SPAVKL+
Sbjct: 61 TMELDGKEELVVLRAFQMHPYKPQVMHIDFQRIAPDEKVTMRVPLHFSGAEESPAVKLSK 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
IIS+ +S + ++CLP LP+FI ++L KME+ ++ +DI +P GV+V D +A
Sbjct: 121 AIISHAVSYVEVTCLPLQLPEFIAVDLSKMELGMTLRATDIAMPEGVTV----HNDVVVA 176
Query: 181 TAIIPV 186
+ I PV
Sbjct: 177 SVIAPV 182
>gi|91775030|ref|YP_544786.1| 50S ribosomal protein L25P [Methylobacillus flagellatus KT]
gi|122985595|sp|Q1H3J2.1|RL25_METFK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91709017|gb|ABE48945.1| LSU ribosomal protein L25P [Methylobacillus flagellatus KT]
Length = 207
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 131/182 (71%), Gaps = 1/182 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A +R+ KGTS SR LR+ G VPG++YGG+K+ V + NH ++ + ETFH+SIL
Sbjct: 3 ITIKATKREGKGTSASRRLRRAGNVPGVVYGGDKEAVSLEFNHKELFLEFRHETFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
NLE+ G+ E V+LR++QLH + + H DFQRV +K+HVKVPLHFIN++I+P VKL
Sbjct: 63 NLEVDGQKEQVVLRDYQLHPVRNTIQHIDFQRVSASEKVHVKVPLHFINADIAPGVKLAG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTI 179
I+++++++ +SCLPK+LP+FIE++L +E SIHLS IKLP GV + + + D +
Sbjct: 123 GIVTHILTEADVSCLPKDLPEFIEVDLSNLEAGHSIHLSQIKLPNGVEFVQLAHDNDAAV 182
Query: 180 AT 181
A+
Sbjct: 183 AS 184
>gi|397661352|ref|YP_006502052.1| 50S ribosomal protein L25 [Taylorella equigenitalis ATCC 35865]
gi|394349531|gb|AFN35445.1| 50S ribosomal protein L25 [Taylorella equigenitalis ATCC 35865]
gi|399115425|emb|CCG18226.1| 50S ribosomal protein L25 [Taylorella equigenitalis 14/56]
Length = 212
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 135/194 (69%), Gaps = 1/194 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G++PGI+YGG +P+ I ++HN I+HAL+K+ FHSS+L
Sbjct: 1 MKFTAKARSVQGSSASRRLRREGRLPGIVYGGKGEPLNIDLDHNEIFHALRKQEFHSSLL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK E VLLR Q HAYK VLH DF RV+ + I KVPL+FIN E+SPAVKL+
Sbjct: 61 EMDLDGKTETVLLRAVQWHAYKPQVLHIDFLRVERGQPITTKVPLNFINDEVSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI-HSTEEDPTI 179
+IS +++++ ++CLPK+LP I ++L ++E ++ +HLS IK P GV H+ EED +
Sbjct: 121 NLISKIVTEIEVTCLPKDLPSEIVVDLSELEADSVVHLSSIKPPAGVEFTGHNPEEDMVL 180
Query: 180 ATAIIPVNTLESDN 193
A+A P ES +
Sbjct: 181 ASASSPREVTESAD 194
>gi|375107726|ref|ZP_09753987.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium
JOSHI_001]
gi|374668457|gb|EHR73242.1| ribosomal protein L25, Ctc-form [Burkholderiales bacterium
JOSHI_001]
Length = 228
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 126/182 (69%), Gaps = 1/182 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER ++GT SR LR GKVPGI+YGG K P I ++HN +Y ALKKE FHSS+L
Sbjct: 1 MKFVAFERNQQGTGASRRLRSGGKVPGIVYGGGK-PANIELDHNALYFALKKEAFHSSLL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G V+ VLLR+FQ+H +K+ VLH DFQRVD +IH KVPLHF E S AVK +
Sbjct: 60 EMELGGAVQKVLLRDFQMHPWKQQVLHIDFQRVDETTRIHKKVPLHFSGEENSVAVKTDK 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
C++++V++++ I CL LP+F+ ++L + S+H SD+KLP GV + +P +
Sbjct: 120 CLVNHVMTEIEIECLAMALPEFLAVDLSGLTKGQSLHASDLKLPEGVKIKKHGTLNPVVV 179
Query: 181 TA 182
+A
Sbjct: 180 SA 181
>gi|393759956|ref|ZP_10348768.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
gi|393161768|gb|EJC61830.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
Length = 198
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 127/187 (67%), Gaps = 2/187 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +GTS SR LR G+VP I+YGG + PV IS++HN IYH L+KE FH+SIL
Sbjct: 1 MKFTATSRDVQGTSASRRLRHAGRVPAIVYGGEEQPVVISLDHNEIYHNLRKEAFHASIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK E VLLR+ Q H YK+ VLH DFQRV + I KVPL+F E+SPAVKL+
Sbjct: 61 TMELDGKAEKVLLRSVQWHPYKQQVLHVDFQRVLASQAITTKVPLNFEGGEVSPAVKLSG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+IS+++++L I+CLP NLP I ++L M N ++HL IKLP GV+ + +P +A
Sbjct: 121 QVISHILTELEITCLPGNLPASITVDLSGMTANANLHLDSIKLPLGVTYA-GNDTNPLLA 179
Query: 181 TAIIPVN 187
A +PV
Sbjct: 180 AA-LPVG 185
>gi|224823793|ref|ZP_03696902.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania ferrooxidans 2002]
gi|224604248|gb|EEG10422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania ferrooxidans 2002]
Length = 192
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 125/168 (74%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
++IA +R++ GTS SR LR GK+P ++YG N + V + ++HN +Y+ALK+E FH+ ILN
Sbjct: 4 ELIAAKREQLGTSASRRLRHAGKLPAVVYGANTEAVSVVLDHNPVYYALKEEGFHTGILN 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L I G+ + VLLR++Q+H YK+LVLH DFQRVD +K+HVKVPLHF+ ++ S AVKL
Sbjct: 64 LVIDGEKQAVLLRDYQMHPYKQLVLHMDFQRVDLNEKMHVKVPLHFVGADASEAVKLQGA 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
IS+V++++ + LP LP FIE++L ++ +IHLSD+KLP GV +
Sbjct: 124 KISHVLTEVDVRALPAQLPSFIEVDLSAIQAGQTIHLSDLKLPEGVEI 171
>gi|253999718|ref|YP_003051781.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylovorus
glucosetrophus SIP3-4]
gi|313201766|ref|YP_004040424.1| ribosomal 5S rRNA e-loop-binding protein ctc/l25/tl5 [Methylovorus
sp. MP688]
gi|253986397|gb|ACT51254.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus
glucosetrophus SIP3-4]
gi|312441082|gb|ADQ85188.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus
sp. MP688]
Length = 205
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A +R+ +GT SR LR+ GKVPGI+YG +KD V + +H ++ + E FH+SIL
Sbjct: 3 IEITAVKRENQGTGASRRLRRAGKVPGIVYGASKDAVSVEFDHKALFLEFRHEAFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + GK E V+LR++Q+H + + H DFQRV +K+HVKVPLHFIN +I+P VKL+
Sbjct: 63 TLNLDGKKEQVVLRDYQMHPVRNTIQHIDFQRVSATEKLHVKVPLHFINQDIAPGVKLSG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTI 179
++++++++ +SCLPK+LP+FIE++L +E SIHLS IKLP+GV + + E D +
Sbjct: 123 GVVTHILTEADVSCLPKDLPEFIEVDLATLEAGHSIHLSQIKLPKGVEFVQLAHENDAAV 182
Query: 180 ATAIIP 185
A+ +P
Sbjct: 183 ASISVP 188
>gi|451811971|ref|YP_007448425.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777873|gb|AGF48821.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 205
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 132/185 (71%), Gaps = 2/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+I A R GTS SR LR +G+VP IIYGG+ P+ I ++HN IYHAL+KE FHSSIL
Sbjct: 1 MEINALLRDMHGTSASRRLRHVGRVPAIIYGGSSLPMTIELDHNEIYHALRKEKFHSSIL 60
Query: 61 NLEIYGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ I K E V+LR+ Q H YK+ VLH DFQRV++ ++I KVPLHF+N +ISPAVK+
Sbjct: 61 KITINNKGTEQVILRSVQWHPYKQQVLHIDFQRVESNQEISTKVPLHFLNEDISPAVKVG 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV-IHSTEEDPT 178
II +V+++L I+C+P LP+FI+++L + + S+HLSDI LP GVS H + +P
Sbjct: 121 GAIIRHVMTELDITCMPALLPQFIDVDLSGVSLGDSVHLSDINLPNGVSYNSHGIDTNPL 180
Query: 179 IATAI 183
+A+A+
Sbjct: 181 LASAV 185
>gi|399117243|emb|CCG20057.1| 50S ribosomal protein L25 [Taylorella asinigenitalis 14/45]
Length = 212
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G++PGI+YGG +P+ I ++HN I+HAL+K+ FHSS+L
Sbjct: 1 MKFSAKARSVQGSSASRRLRREGRLPGIVYGGKGEPLNIDLDHNEIFHALRKQEFHSSLL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK E VLLR Q H YK VLH DF R++ + I K+PLHFIN E SPAVKL+
Sbjct: 61 EMDLDGKTETVLLRAVQWHPYKPQVLHIDFLRIERGQPITTKIPLHFINDENSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
+IS +++++ ++CLPK+LP I ++L ++E ++ IHLS IK P GV V H EED +
Sbjct: 121 NLISKIVTEIEVTCLPKDLPSEIVVDLGELEADSVIHLSSIKAPEGVEFVAHGHEEDLVL 180
Query: 180 ATAIIPVNTLESDN 193
A+A P ES +
Sbjct: 181 ASASTPRAVTESAD 194
>gi|348589678|ref|YP_004874140.1| 50S ribosomal protein L25p [Taylorella asinigenitalis MCE3]
gi|347973582|gb|AEP36117.1| LSU ribosomal protein L25p [Taylorella asinigenitalis MCE3]
Length = 212
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK A R +G+S SR LR+ G++PGI+YGG +P+ I ++HN I+HAL+K+ FHSS+L
Sbjct: 1 MKFSAKARSVQGSSASRRLRREGRLPGIVYGGKGEPLNIDLDHNEIFHALRKQEFHSSLL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK E VLLR Q H YK VLH DF R++ + I K+PLHFIN E SPAVKL+
Sbjct: 61 EMDLDGKTETVLLRAVQWHPYKPQVLHIDFLRIERGQPITTKIPLHFINDENSPAVKLHG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
+IS +++++ ++CLPK+LP I ++L ++E ++ IHLS IK P GV V H EED +
Sbjct: 121 NLISKIVTEIEVTCLPKDLPSEIVVDLGELEADSVIHLSSIKAPEGVEFVAHGHEEDLVL 180
Query: 180 ATAIIPVNTLESDN 193
A+A P ES +
Sbjct: 181 ASASTPRAVTESAD 194
>gi|121593316|ref|YP_985212.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. JS42]
gi|222110037|ref|YP_002552301.1| 50S ribosomal protein l25/general stress protein ctc [Acidovorax
ebreus TPSY]
gi|166223657|sp|A1W4G1.1|RL25_ACISJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801044|sp|B9ME47.1|RL25_DIAST RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120605396|gb|ABM41136.1| LSU ribosomal protein L25P [Acidovorax sp. JS42]
gi|221729481|gb|ACM32301.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax
ebreus TPSY]
Length = 208
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +AFER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MQFVAFERAKQGTGASRRLRISGKAPGIVYGGSAEPQLIEIDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G+V VLLR+ Q H +K+ VLH DFQRVD + ++H+KVPLHF E S AVK+
Sbjct: 61 DMELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDEKTRVHLKVPLHFEGVEGSQAVKVEG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C ++ +I +L + C+P LP+FI+++L + +++ L +KLP GV +V+ + ++P +
Sbjct: 121 CTVTPLIHELDVMCMPAQLPEFIKVDLSGLTSKSTMGLQSVKLPHGVKAVVRGSNKNPAL 180
Query: 180 ATAIIP 185
+ +P
Sbjct: 181 VSIKLP 186
>gi|347541314|ref|YP_004848740.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania sp. NH8B]
gi|345644493|dbj|BAK78326.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania sp. NH8B]
Length = 192
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 124/168 (73%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
++IA +R++ GTS SR LR GK+P ++YG N + V + + HN +Y+ALK+E FH+ ILN
Sbjct: 4 ELIAAKREQLGTSASRRLRHAGKLPAVVYGANTEAVSVVLEHNPVYYALKEEGFHTGILN 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L I G+ + VLLR++Q+H YK+LVLH DFQRVD +K+HVKVPLHF+ ++ S AVKL
Sbjct: 64 LVIDGEKQAVLLRDYQMHPYKQLVLHMDFQRVDLNEKMHVKVPLHFVGADASEAVKLQGA 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
IS+V++++ + LP LP FIE++L ++ +IHLSD+KLP GV +
Sbjct: 124 KISHVLTEVDVRALPAQLPSFIEVDLSAIQAGQTIHLSDLKLPEGVEI 171
>gi|124268412|ref|YP_001022416.1| 50S ribosomal protein L25/general stress protein Ctc [Methylibium
petroleiphilum PM1]
gi|166223695|sp|A2SKU2.1|RL25_METPP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|124261187|gb|ABM96181.1| LSU ribosomal protein L25P [Methylibium petroleiphilum PM1]
Length = 214
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 133/184 (72%), Gaps = 1/184 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +A+ R+ +GT SR LR GKVPGI+YG +P+KI ++HN ++HALKKE FH+S+L
Sbjct: 1 MKFVAYPRELQGTGASRRLRISGKVPGIVYGAG-EPLKIELDHNALFHALKKEAFHASLL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E GK + VLLR+ Q+HA++ VLH DFQRVD ++ KVPLHF+N E +P VKL+
Sbjct: 60 DMEFNGKSQQVLLRDVQMHAFRPQVLHVDFQRVDATTRVTKKVPLHFVNEENAPGVKLDK 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+IS+V+++L + CL LP+++ ++L ++ S+H++D+KLP V V+ +++P IA
Sbjct: 120 GLISHVVTELEVECLASQLPEYLTVDLGELAKGQSLHVNDLKLPPSVKVVLRGKKNPVIA 179
Query: 181 TAII 184
T ++
Sbjct: 180 TVVM 183
>gi|325983634|ref|YP_004296036.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas
sp. AL212]
gi|325533153|gb|ADZ27874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas
sp. AL212]
Length = 206
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A +R +G SR LR GKVP +IYGG++ I M+HN ++H LK E FH+SIL
Sbjct: 3 IEISADKRTLQGKGASRRLRGSGKVPAVIYGGDQAAQSIEMDHNDLFHKLKLEAFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + GK E VLLR+ Q+H +KK VLH DFQRVD KKIH+KVPLHFIN+EISP VK +
Sbjct: 63 TLSVAGKKEPVLLRDVQMHPFKKQVLHVDFQRVDKNKKIHMKVPLHFINAEISPGVKTSG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP-TI 179
I++++++++ I+CLP +LP+FI ++L ++ ++HLSD+ LP+ V + + D +
Sbjct: 123 GIVTHILTEVDITCLPGDLPEFISVDLAELTAGHTLHLSDLVLPKDVETVALAKGDNLPV 182
Query: 180 ATAIIPVNTLESD---NNSSIEK 199
AT +IP + L + +S EK
Sbjct: 183 ATIVIPRSVLSEEAAGETASAEK 205
>gi|333912831|ref|YP_004486563.1| 50S ribosomal protein L25 [Delftia sp. Cs1-4]
gi|333743031|gb|AEF88208.1| 50S ribosomal protein L25 [Delftia sp. Cs1-4]
Length = 209
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +AFER K+GT SR LR GK PGI+YGG + I ++HN ++HALKKE FHSSIL
Sbjct: 1 MQFVAFERAKQGTGASRRLRNSGKAPGIVYGGAAEAQLIEIDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G+ V+LR+ Q H YK+L+LH DFQRVD + K+H+KVPLHF E S AVK+ +
Sbjct: 61 DMEVNGQTSKVVLRDVQFHPYKQLILHVDFQRVDDKTKVHLKVPLHFEGMEQSQAVKVEN 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C I+ ++ +L + C+P LP+FI ++L + +++ L +KLP GV +V+ + ++P +
Sbjct: 121 CTITPLVHELDVVCMPAQLPEFITVDLSGLTSKSTLGLQGVKLPNGVKAVVRGSNKNPAL 180
Query: 180 ATAIIP 185
+ +P
Sbjct: 181 ISIKLP 186
>gi|160900866|ref|YP_001566448.1| 50S ribosomal protein L25/general stress protein Ctc [Delftia
acidovorans SPH-1]
gi|226736305|sp|A9BP18.1|RL25_DELAS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|160366450|gb|ABX38063.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Delftia
acidovorans SPH-1]
Length = 209
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +AFER K+GT SR LR GK PGI+YGG + I ++HN ++HALKKE FHSSIL
Sbjct: 1 MQFVAFERAKQGTGASRRLRNSGKAPGIVYGGAAEAQLIEIDHNALWHALKKEVFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G+ V+LR+ Q H YK+L+LH DFQRVD + K+H+KVPLHF E S AVK+ +
Sbjct: 61 DMEVNGQTSKVVLRDVQFHPYKQLILHVDFQRVDDKTKVHLKVPLHFEGMEQSQAVKVEN 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C I+ ++ +L + C+P LP+FI ++L + +++ L +KLP GV +V+ + ++P +
Sbjct: 121 CTITPLVHELDVVCMPAQLPEFITVDLSGLTSKSTLGLQGLKLPNGVKAVVRGSNKNPAL 180
Query: 180 ATAIIP 185
+ +P
Sbjct: 181 ISIKLP 186
>gi|437999795|ref|YP_007183528.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|429339029|gb|AFZ83451.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
Length = 205
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 124/169 (73%), Gaps = 1/169 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+I A R K GTS SR LR G+VP IIYGGN P+ + ++HN +YHAL+KE FHSSIL
Sbjct: 1 MEINAVLRDKHGTSASRRLRHEGRVPAIIYGGNSLPMTMELDHNEVYHALRKEKFHSSIL 60
Query: 61 NLEIYGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ I GK E V+LR+ Q H YK+ VLH DFQR+D+ ++I +VPLHF+N EISPAVK+
Sbjct: 61 KIIINGKGTEQVILRSVQWHPYKQQVLHIDFQRIDSNQEISTRVPLHFLNEEISPAVKVG 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
II +VI++L I+C+P LP+FI+++L + + S+HL DIKLP G+S
Sbjct: 121 GAIIRHVITELDITCMPDLLPQFIDVDLSYVNLGDSVHLLDIKLPSGIS 169
>gi|82701724|ref|YP_411290.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosospira
multiformis ATCC 25196]
gi|109893371|sp|Q2YBH3.1|RL25_NITMU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|82409789|gb|ABB73898.1| LSU ribosomal protein L25P [Nitrosospira multiformis ATCC 25196]
Length = 228
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A +R+ +G SR LR GKVPGIIYGG I ++HN +YH LK E FH+SIL
Sbjct: 3 IEISAEKRELQGKGASRRLRGSGKVPGIIYGGENPAQPIELDHNNLYHQLKLEAFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ + G+ E VLLR+ Q+H +K VLH DFQRV + KKIH+KVPLHFIN +I+P VKL
Sbjct: 63 TMSVEGQKEKVLLRDIQMHPFKPQVLHIDFQRVASNKKIHMKVPLHFINEDIAPGVKLAG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE-EDPTI 179
++S+V+++L +SCLPK+LP+FI +++ ++ +IHLS+++LP GV + + ED +
Sbjct: 123 GLVSHVLTELDVSCLPKDLPEFISVDVGELAAGNTIHLSNLQLPEGVEIPALMKGEDLPV 182
Query: 180 ATAIIP 185
AT IP
Sbjct: 183 ATIAIP 188
>gi|451812698|ref|YP_007449151.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|451778667|gb|AGF49547.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 209
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 124/169 (73%), Gaps = 1/169 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A R K GTS SR LR G+VP IIYGGN P+ + ++HN +YHAL+KE FHSSIL
Sbjct: 5 VEINAVLRDKHGTSASRRLRHEGRVPAIIYGGNSLPMTMELDHNEVYHALRKEKFHSSIL 64
Query: 61 NLEIYGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ I GK E V+LR+ Q H YK+ VLH DFQR+D+ ++I +VPLHF+N EISPAVK+
Sbjct: 65 KIIINGKGTEQVILRSVQWHPYKQQVLHIDFQRIDSNQEISTRVPLHFLNEEISPAVKVG 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
II +VI++L I+C+P LP+FI+++L + + S+HL DIKLP G+S
Sbjct: 125 GAIIRHVITELDITCMPDLLPQFIDVDLSYVNLGDSVHLLDIKLPSGIS 173
>gi|350543960|ref|ZP_08913633.1| LSU ribosomal protein L25p [Candidatus Burkholderia kirkii UZHbot1]
gi|350528261|emb|CCD36088.1| LSU ribosomal protein L25p [Candidatus Burkholderia kirkii UZHbot1]
Length = 178
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Query: 29 IYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHA 88
+YGG D + ++HN ++HALKKE FHSSIL+LE+ GK + VLLR+ Q H +K+LVLH
Sbjct: 1 MYGGETDVQLVELDHNALWHALKKEVFHSSILDLEVAGKSQQVLLRDVQYHPFKQLVLHV 60
Query: 89 DFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLE 148
DFQRVD +KK+H KVPLHF+N E +PAVKL+ +I++V+++L + CLP LP+F+E++L
Sbjct: 61 DFQRVDAKKKLHTKVPLHFMNQETNPAVKLSGAVITHVLTELEVECLPAELPEFLEVDLA 120
Query: 149 KMEVNTSIHLSDIKLPRGVSVIHSTE-EDPTIATAIIPVNTLESDNNSSIEKE 200
+++ ++H +I LP+GVS+ +TE E+P +A+A +P + + + E
Sbjct: 121 QIKAGQTMHAKNIPLPKGVSLTVATEAENPVVASATVPAAVVSEEAGEAASGE 173
>gi|167561485|ref|ZP_02354401.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
oklahomensis EO147]
gi|167568715|ref|ZP_02361589.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
oklahomensis C6786]
Length = 167
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 123/163 (75%), Gaps = 2/163 (1%)
Query: 39 ISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKK 98
I ++HN ++HALKKE FHSSIL+LE+ G+ + VLLR+ Q H +K+LVLH DFQRVD +KK
Sbjct: 2 IELDHNALWHALKKEAFHSSILDLEVAGQSQQVLLRDVQYHPFKQLVLHVDFQRVDAKKK 61
Query: 99 IHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHL 158
+H KVPLHF+N+E+SPAVKL+S ++S+V +++ + CLP LP+F+E++L K+E S+H
Sbjct: 62 LHTKVPLHFLNAEVSPAVKLSSAVVSHVATEIEVECLPAALPEFLEVDLSKIEAGQSLHA 121
Query: 159 SDIKLPRGVSVI-HSTEEDPTIATAIIPVNTLESDNNSSIEKE 200
DI LP GV+++ H E+P +A+A IP + S+ ++ E E
Sbjct: 122 KDIALPNGVALVAHVDAENPVVASATIPAGAV-SEEAAAGEGE 163
>gi|121603807|ref|YP_981136.1| 50S ribosomal protein L25/general stress protein Ctc [Polaromonas
naphthalenivorans CJ2]
gi|166223703|sp|A1VKN7.1|RL25_POLNA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120592776|gb|ABM36215.1| LSU ribosomal protein L25P [Polaromonas naphthalenivorans CJ2]
Length = 218
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 122/181 (67%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK +AFER K+GT SR LR G+ PGI+YGG +P+ I ++HN ++HA+KKE FH SIL
Sbjct: 1 MKFVAFERAKQGTGASRRLRITGRTPGIVYGGTAEPILIEIDHNALWHAIKKEAFHGSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G VLLR+ Q+H YK+ V H DFQRV+ ++ VKVP+HF E SPAVK +
Sbjct: 61 EMELGGTEHKVLLRDLQMHPYKQQVQHIDFQRVEARTRMTVKVPVHFSGEEESPAVKTEN 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
C++++V++++ +SC P ++P FI ++L + S+H+ DI LP+ V + +P +
Sbjct: 121 CLVTHVLTEMTVSCFPADIPDFIAVDLGGLTKGKSLHVKDIVLPKRVKAAVKGQVNPVMV 180
Query: 181 T 181
+
Sbjct: 181 S 181
>gi|302877722|ref|YP_003846286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella
capsiferriformans ES-2]
gi|302580511|gb|ADL54522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Gallionella
capsiferriformans ES-2]
Length = 202
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 126/187 (67%), Gaps = 3/187 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A RK +GT SR LRK G VPG++YG + + V I MNHN +Y+ L+ E+FH+S+L + +
Sbjct: 7 ATTRKTQGTGASRRLRKAGSVPGVVYG-SGEAVMIEMNHNELYYKLRAESFHASVLTMNL 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK E V LR F H +++ V H DFQRVD KKIH+KVPLHFIN +I+PAVK IS
Sbjct: 66 DGKEEAVQLRAFVNHPFRQQVQHLDFQRVDLSKKIHIKVPLHFINQDIAPAVKTGGGKIS 125
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE--DPTIATA 182
+V+ + ISCLP +LP FIE++L M++ S+HL ++KLPRGV + E + +AT
Sbjct: 126 HVMIEAEISCLPADLPAFIEVDLGGMQLGHSVHLGELKLPRGVELCAHGEHAAEAVVATV 185
Query: 183 IIPVNTL 189
+P ++
Sbjct: 186 HVPRGSV 192
>gi|149925764|ref|ZP_01914028.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter
sp. MED105]
gi|149825881|gb|EDM85089.1| 50S ribosomal protein L25/general stress protein Ctc [Limnobacter
sp. MED105]
Length = 195
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 134/194 (69%), Gaps = 1/194 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK++A R ++G+ SR LR+ G+VPGI+YG N++ +S+ HN ++HAL+KE FHSSIL
Sbjct: 1 MKVVATSRTEQGSGASRRLRRAGQVPGIVYGANQEAQAVSIEHNPLWHALQKEKFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI GK + VLLR++Q H YK +LH DFQR+D +KIH+ VPLHF SPAVKL +
Sbjct: 61 DLEIDGKSQQVLLRDYQSHPYKPQLLHIDFQRIDGNQKIHMNVPLHFSGHLESPAVKLYA 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVN-TSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ V + + I CLPK+LP+FI ++ ++V SIH+++++ P GVS+ + ++D ++
Sbjct: 121 GQVTFVANQIEIECLPKDLPEFIAVDCSVLDVTKRSIHVTELQFPEGVSIPNHGQQDLSV 180
Query: 180 ATAIIPVNTLESDN 193
T I ++ +
Sbjct: 181 VTVKIKAGAVKGGD 194
>gi|30249779|ref|NP_841849.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas
europaea ATCC 19718]
gi|71153155|sp|Q82TQ5.1|RL25_NITEU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|30180816|emb|CAD85736.1| Ribosomal protein L25 [Nitrosomonas europaea ATCC 19718]
Length = 198
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 123/169 (72%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A RK GT +R LR G++PG+IYGGN D I ++H +Y+ LK E FH+SIL
Sbjct: 3 IEISANSRKLHGTGANRRLRSQGRLPGVIYGGNGDAQSIELDHKDLYYKLKMEAFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ I GK E VLLR+ Q+H +K+ VLH DFQRV ++KIHVKVPLHFIN++I+P VKL+
Sbjct: 63 SISIDGKKEQVLLRDVQMHPFKQQVLHIDFQRVRQDQKIHVKVPLHFINADIAPGVKLSG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+IS+V +++ ISCLPK+LP+FI ++L M +++HLSD+ L V +
Sbjct: 123 GMISHVATEIEISCLPKDLPEFITVDLSGMTAGSTLHLSDLILSENVEI 171
>gi|319761697|ref|YP_004125634.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5
[Alicycliphilus denitrificans BC]
gi|330823568|ref|YP_004386871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Alicycliphilus denitrificans K601]
gi|317116258|gb|ADU98746.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Alicycliphilus denitrificans BC]
gi|329308940|gb|AEB83355.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Alicycliphilus denitrificans K601]
Length = 208
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +A+ER K+GT SR LR GK PGI+YGG+ +P I ++HN ++HALKKE FHSSIL
Sbjct: 1 MQFVAYERAKQGTGASRRLRISGKAPGIVYGGSAEPQMIEVDHNALWHALKKEAFHSSIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G+V VLLR+ Q H +K+ VLH DFQRVD + ++H+KVPLH+ E SPAVK
Sbjct: 61 DMELNGQVTKVLLRDVQYHPFKQQVLHVDFQRVDDKTRVHLKVPLHYEGLEGSPAVKEEG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS-VIHSTEEDPTI 179
C ++ +I ++ + C+P LP+FI ++L + ++ + +K+P GV V+ + ++P +
Sbjct: 121 CTVTPLIHEVDVMCMPSQLPEFITVDLSGLTSKSAPGVQSLKIPNGVKIVVRGSNKNPAL 180
Query: 180 ATAIIP 185
+ +P
Sbjct: 181 VSIKLP 186
>gi|167835375|ref|ZP_02462258.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis MSMB43]
gi|424902098|ref|ZP_18325614.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis MSMB43]
gi|390932473|gb|EIP89873.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis MSMB43]
Length = 167
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 123/163 (75%), Gaps = 2/163 (1%)
Query: 39 ISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKK 98
I ++HN ++HALKKE FHSSIL+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK
Sbjct: 2 IELDHNALWHALKKEAFHSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKK 61
Query: 99 IHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHL 158
+H KVPLHF+N+E SPAVKL+S ++S+V++++ I CLP +LP+F+E++L K+E S+H+
Sbjct: 62 LHTKVPLHFLNAETSPAVKLSSAVVSHVVTEIEIECLPADLPEFLEVDLSKIEAGQSLHV 121
Query: 159 SDIKLPRGVSVI-HSTEEDPTIATAIIPVNTLESDNNSSIEKE 200
DI LP GV++ H E+P +A A IP + S+ ++ E E
Sbjct: 122 KDIALPNGVALTPHVDAENPVVALATIPAGAV-SEEAAAGEGE 163
>gi|226939244|ref|YP_002794315.1| Ctc [Laribacter hongkongensis HLHK9]
gi|254801052|sp|C1DBA9.1|RL25_LARHH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226714168|gb|ACO73306.1| Ctc [Laribacter hongkongensis HLHK9]
Length = 185
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 113/167 (67%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A +R +G+S SR LR+ G VPG++YG K V IS +HN +Y+AL+KE FHSSIL
Sbjct: 3 IEIQAQQRADQGSSASRRLRRAGVVPGVVYGAGKAAVAISFDHNTLYYALQKEGFHSSIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
NL I G E V +R+ Q+HA+K V H DFQRVD I KVP FIN EISPAVK+N
Sbjct: 63 NLVIDGATEQVFVRDVQMHAFKPQVQHIDFQRVDANTVIEAKVPFKFINGEISPAVKMNG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
II ++++ + CLP NLP IE++L + S+HLS IKLP GV
Sbjct: 123 KIIGHLLNAAVVRCLPANLPAAIEVDLSTLVAGESVHLSSIKLPEGV 169
>gi|406979974|gb|EKE01656.1| hypothetical protein ACD_21C00082G0006 [uncultured bacterium]
Length = 242
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 126/184 (68%), Gaps = 1/184 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
IIA R G SR LR+ +VPGI+YG KD ++++H+++ L E+F++ IL+L
Sbjct: 7 IIATARSDMGKGASRRLRRAEQVPGIVYGAGKDAAAVTIDHSLLLRLLASESFYTQILDL 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+I GK E V+LR+ Q H +K +LH D QR+ +KI +++PLHF +E++P VKL+ +
Sbjct: 67 DIGGKKEHVILRDLQRHPFKPRILHIDLQRISATEKIAMRIPLHFTGAELAPGVKLSGGL 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE-EDPTIAT 181
IS ++SD+ + C PK+LP+FIE++L +E+N +IHLSD+KL G+ ++ T ED +AT
Sbjct: 127 ISRLMSDIEVRCFPKDLPEFIEVDLSTLEINQTIHLSDLKLAPGIEIVAITHGEDSPVAT 186
Query: 182 AIIP 185
A IP
Sbjct: 187 AYIP 190
>gi|167579760|ref|ZP_02372634.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis TXDOH]
gi|167617836|ref|ZP_02386467.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
thailandensis Bt4]
Length = 167
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 123/163 (75%), Gaps = 2/163 (1%)
Query: 39 ISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKK 98
I ++HN ++HALKKE FHSSIL+LE+ GK + VLLR+ Q H +++LVLH DFQR+D +KK
Sbjct: 2 IELDHNALWHALKKEAFHSSILDLEVAGKSQRVLLRDVQYHPFRQLVLHVDFQRIDPKKK 61
Query: 99 IHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHL 158
+H KVPLHF+N+E SPAVKL+S ++S+V++++ + CLP +LP+F+E++L K+E S+H
Sbjct: 62 LHTKVPLHFLNAESSPAVKLSSAVVSHVVTEIEVECLPADLPEFLEVDLSKIEAGQSLHA 121
Query: 159 SDIKLPRGVSVI-HSTEEDPTIATAIIPVNTLESDNNSSIEKE 200
DI LP GV++ H E+P +A+A IP + S+ ++ E E
Sbjct: 122 KDIVLPNGVALTPHVDAENPVVASATIPAGAV-SEEAAAGEGE 163
>gi|254468776|ref|ZP_05082182.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13]
gi|207087586|gb|EDZ64869.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13]
Length = 229
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 125/186 (67%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A +R KGT SR LR+ GKVPGI+YG +KD V I ++ ++ KE FH+SIL
Sbjct: 3 ITVTAEKRDVKGTGASRRLRRNGKVPGILYGNHKDAVSIVLDSKTLHQQFHKEAFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L G E VLLR++QL K +LH DFQRV+ +KIHV VP HFIN +I+ VKL
Sbjct: 63 ELSTDGTKESVLLRDYQLEPVKGTILHVDFQRVNQNEKIHVNVPFHFINEDIAKGVKLEG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE-DPTI 179
+IS++++++ I+CLPK+LP+FIE++L + + S+HLS++ LP GV + TEE DP I
Sbjct: 123 GVISHIMTEVDIACLPKDLPQFIEVDLVDLGLGESVHLSELNLPEGVELTALTEENDPAI 182
Query: 180 ATAIIP 185
+ + P
Sbjct: 183 TSIVKP 188
>gi|253997198|ref|YP_003049262.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera
mobilis JLW8]
gi|253983877|gb|ACT48735.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera
mobilis JLW8]
Length = 202
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 118/183 (64%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A +R KGT SR LR G VPG++YGG KD + +N ++ + E FH+S+L
Sbjct: 3 IEINAVKRDAKGTGASRRLRHAGSVPGVVYGGGKDAYPLEINAKELFLQFRHEAFHASVL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L I GK E VLLR+FQ+H + + H DFQRV +KIHVKVP HF N++ +P VKL
Sbjct: 63 TLIIEGKKESVLLRDFQMHPVRNTIQHVDFQRVSATEKIHVKVPFHFTNADAAPGVKLGG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I++++ ++ +SCL K+LP+FIE+++ +EV SIHLS IKLP+GV + D
Sbjct: 123 GIVAHIQTEADVSCLAKDLPEFIEVDVSALEVGQSIHLSQIKLPKGVEFVQLAHGDDAAV 182
Query: 181 TAI 183
+I
Sbjct: 183 ASI 185
>gi|118594523|ref|ZP_01551870.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylophilales bacterium HTCC2181]
gi|118440301|gb|EAV46928.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylophilales bacterium HTCC2181]
Length = 230
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 121/175 (69%), Gaps = 1/175 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ KGT SR LR GK PG++YGG+K+ + ++ ++ + E FH+SIL L + GK
Sbjct: 10 RELKGTGASRRLRHAGKTPGVLYGGDKEATSLEIDSKELFMQFRHEAFHASILTLNLAGK 69
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E V+LR+FQ+H + ++H DFQR++ +KI VKVP HFIN E +P VKL +IS+++
Sbjct: 70 KEAVILRDFQMHPVRNNIVHIDFQRINENEKISVKVPFHFINEETAPGVKLEGGLISHIM 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIAT 181
+++ ISCLPK+LP++IE+++ + + SIHLS++K+P GV + S E DP I +
Sbjct: 130 TEIDISCLPKDLPQYIEVDMSALSIGDSIHLSEVKVPEGVELTTLSDENDPAITS 184
>gi|257094305|ref|YP_003167946.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046829|gb|ACV36017.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 203
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 131/192 (68%), Gaps = 2/192 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R +G+ SR LR+ +VP I+YGG+ P+ I ++HN I L+KE FH+S+L L +
Sbjct: 7 ARKRTLQGSGASRRLRREKRVPAIVYGGSAAPLLIDLDHNEILLNLRKEAFHASVLTLNV 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+LR+ Q H +K LVLH DFQRVDT IH +VPLHF+N++I+P VK+ ++
Sbjct: 67 DGATQSVVLRDSQRHPWKPLVLHCDFQRVDTTHAIHQRVPLHFVNADIAPGVKIGGGNVA 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
++++D+ ++CLP++LP +IE++L+ +E ++H+S++ P GV + +EDP +A+ I
Sbjct: 127 HILNDIEVTCLPQDLPAYIEVDLKNLESGHALHVSELVFPAGVKPVTHGDEDPVVAS--I 184
Query: 185 PVNTLESDNNSS 196
P ++ +++
Sbjct: 185 PARKGGAETDAA 196
>gi|15839232|ref|NP_299920.1| 50S ribosomal protein L25 [Xylella fastidiosa 9a5c]
gi|71153678|sp|Q9PA77.1|RL25_XYLFA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|9107874|gb|AAF85440.1|AE004071_8 50S ribosomal protein L25 [Xylella fastidiosa 9a5c]
Length = 208
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR G +P IIYGG + PV I +NH I+ A + E F+SSIL+
Sbjct: 5 QIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWFYSSILD 64
Query: 62 LEI-YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + G E VLLR+ Q H Y++LV+H DFQRV ++ K+ V VPLHFIN SPA K +
Sbjct: 65 LNVDGGGGEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAGKASG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+I++ ++++++SCLPK+LP+FIE++L + V IHLSDI P GV + +++ +A
Sbjct: 125 VVITHELNEVHVSCLPKDLPEFIEVDLSTLSVGHVIHLSDITFPIGVELSTRLDKEHDMA 184
Query: 181 TAIIPVNTLESDNNSSIEKEKNN 203
I +E D + E E +
Sbjct: 185 VVIAKHVVIEDDTPAEEEGEGDT 207
>gi|299531512|ref|ZP_07044918.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas
testosteroni S44]
gi|298720475|gb|EFI61426.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas
testosteroni S44]
Length = 207
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +A ER K+GT SR LR GK PGI+YG + + I ++HN ++HA+ KE FHSSIL
Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAGEAQL-IEIDHNALWHAVHKEAFHSSIL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++EI G+V V+LR+ Q H YKKLV H DFQRVD K+H+ VPLHF + SPAVK+ +
Sbjct: 60 DMEINGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGAAESPAVKVEN 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C ++ ++ +L + C P NLP+FI+++L + + + L +KLP GV +V+ ++P++
Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179
Query: 180 ATAIIP 185
+ +P
Sbjct: 180 ISIKLP 185
>gi|264676949|ref|YP_003276855.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni
CNB-2]
gi|262207461|gb|ACY31559.1| ribosomal 5S rRNA E-loop binding protein [Comamonas testosteroni
CNB-2]
Length = 207
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +A ER K+GT SR LR GK PGI+YG + + I ++HN ++HA+ KE FHSSIL
Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAGEAQL-IEIDHNALWHAVHKEAFHSSIL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++EI G+V V+LR+ Q H YKKLV H DFQRVD K+H+ VPLHF + SPAVK+ +
Sbjct: 60 DMEINGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGTAESPAVKVEN 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C ++ ++ +L + C P NLP+FI+++L + + + L +KLP GV +V+ ++P++
Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179
Query: 180 ATAIIP 185
+ +P
Sbjct: 180 ISIKLP 185
>gi|297539288|ref|YP_003675057.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera
versatilis 301]
gi|297258635|gb|ADI30480.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera
versatilis 301]
Length = 202
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 121/183 (66%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A +R KGT SR LR+ G VPG++YG K+ V + +N ++ + E FH+S+L
Sbjct: 3 IEINAVKRDVKGTGASRRLRRAGTVPGVVYGAGKEAVTLEINAKELFLEFRHEAFHASVL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + GK E VLLR+FQ+H + + H DFQRV +KIHVKVP HFIN++I+P VK
Sbjct: 63 SLNLDGKKENVLLRDFQMHPVRNTIQHIDFQRVSATEKIHVKVPFHFINADIAPGVKTGG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I+++++++ +SCL K+LP+F+E++L +E+ SIHLS IKL +GV + +
Sbjct: 123 GIVAHILTEADVSCLAKDLPEFLEVDLAGLEMGHSIHLSQIKLAKGVEFVQLAHGNDAAV 182
Query: 181 TAI 183
AI
Sbjct: 183 AAI 185
>gi|28199877|ref|NP_780191.1| 50S ribosomal protein L25 [Xylella fastidiosa Temecula1]
gi|182682629|ref|YP_001830789.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa M23]
gi|386083962|ref|YP_006000244.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|417557352|ref|ZP_12208391.1| Ribosomal protein L25 (general stress protein Ctc) RplY [Xylella
fastidiosa EB92.1]
gi|71153679|sp|Q87A23.1|RL25_XYLFT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226694604|sp|B2IA79.1|RL25_XYLF2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|28057998|gb|AAO29840.1| 50S ribosomal protein L25 [Xylella fastidiosa Temecula1]
gi|182632739|gb|ACB93515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylella
fastidiosa M23]
gi|307578909|gb|ADN62878.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|338180016|gb|EGO82923.1| Ribosomal protein L25 (general stress protein Ctc) RplY [Xylella
fastidiosa EB92.1]
Length = 207
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR G +P IIYGG + PV I +NH I+ A + E F+SSIL+
Sbjct: 5 QIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWFYSSILD 64
Query: 62 LEIYGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + G E VLLR+ Q H Y++LV+H DFQRV ++ K+ V VPLHFIN SPA K+
Sbjct: 65 LNVDGAGAEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAGKVGG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+I++ ++++ +SCLPK+LP+FIE++L + V IHLSDI P GV + +++ +A
Sbjct: 125 VVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFPIGVELSTRLDKEHDMA 184
Query: 181 TAIIPVNTLESD 192
I +E D
Sbjct: 185 VVIAKHAVIEDD 196
>gi|221068918|ref|ZP_03545023.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas
testosteroni KF-1]
gi|220713941|gb|EED69309.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Comamonas
testosteroni KF-1]
Length = 207
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +A ER K+GT SR LR GK PGI+YG + + I ++HN ++HA+ KE FHSS+L
Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAGEAQL-IEIDHNALWHAVHKEAFHSSVL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E+ G+V V+LR+ Q H YKKLV H DFQRVD K+H+ VPLHF + SPAVK+ +
Sbjct: 60 DMEVNGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGAAESPAVKVEN 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C ++ ++ +L + C P NLP+FI+++L + + + L +KLP GV +V+ ++P++
Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179
Query: 180 ATAIIP 185
+ +P
Sbjct: 180 ISIKLP 185
>gi|71275258|ref|ZP_00651545.1| Ribosomal protein L25 [Xylella fastidiosa Dixon]
gi|170731256|ref|YP_001776689.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa M12]
gi|226694605|sp|B0U5Y7.1|RL25_XYLFM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71164067|gb|EAO13782.1| Ribosomal protein L25 [Xylella fastidiosa Dixon]
gi|71728035|gb|EAO30246.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1]
gi|167966049|gb|ACA13059.1| 50S ribosomal protein L25 [Xylella fastidiosa M12]
Length = 207
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR G +P IIYGG++ PV I +NH I+ A + E F+SSIL+
Sbjct: 5 QIKAQRRKDEGKGASRRLRHAGMIPAIIYGGDQRPVSIQLNHEQIWLAQQNEWFYSSILD 64
Query: 62 LEI-YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + G E VLLR+ Q H Y++LV+H DFQRV ++ K+ V VPLHFIN SPA K
Sbjct: 65 LNVDGGGGEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAGKAGG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+I++ ++++ +SCLPK+LP+FIE++L + V IHLSDI P GV + +++ +A
Sbjct: 125 VVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFPIGVELSTRLDKEHDMA 184
Query: 181 TAIIPVNTLESD 192
I +E D
Sbjct: 185 VVIAKHAVIEDD 196
>gi|114331139|ref|YP_747361.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas
eutropha C91]
gi|122313984|sp|Q0AGY6.1|RL25_NITEC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|114308153|gb|ABI59396.1| LSU ribosomal protein L25P [Nitrosomonas eutropha C91]
Length = 202
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 130/196 (66%), Gaps = 1/196 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A R GT +R LR G++PG+IYGG I ++H +Y+ LK + FH+SIL
Sbjct: 3 IEISANSRNLHGTGANRRLRIQGRLPGVIYGGGGTAQPIDLDHKDLYYKLKTDVFHASIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + GK E VLLR+ Q+H +K+ VLH DFQR+ ++KIHVKVPLHFIN++I+P VKL+
Sbjct: 63 SINVDGKKEQVLLRDVQMHPFKQQVLHIDFQRIRQDQKIHVKVPLHFINADIAPGVKLSG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED-PTI 179
+IS+V +++ ISCLPK+LP+ I ++L +M + +H SD+KLP V + D +
Sbjct: 123 GMISHVATEIEISCLPKDLPESITVDLSEMTAGSILHTSDLKLPENVEIPALLRGDNQPV 182
Query: 180 ATAIIPVNTLESDNNS 195
+T I+P +D +
Sbjct: 183 STLIMPRGGEVADESG 198
>gi|58583225|ref|YP_202241.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84625061|ref|YP_452433.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|68053027|sp|Q5GWR5.1|RL25_XANOR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893406|sp|Q2NZW8.1|RL25_XANOM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|58427819|gb|AAW76856.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84369001|dbj|BAE70159.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 211
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 115/168 (68%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+
Sbjct: 6 EIKAERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILD 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHFIN E SPA K +
Sbjct: 66 LNLNGDVQQVLLRDIQRHPFKQLIMHIDFQRVSANQKLSAAVPLHFINEEASPAGKSSEV 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++++ ++++ + CLPK+LP+FIE++L +EV IHLS+IKLP GV +
Sbjct: 126 VVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEI 173
>gi|71730260|gb|EAO32345.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1]
Length = 207
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR G +P IIYGG + PV I +NH I+ A + + F+SSIL+
Sbjct: 5 QIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNDWFYSSILD 64
Query: 62 LEIYGKV-ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + G E VLLR+ Q H Y++LV+H DFQRV ++ K+ V VPLHFIN SPA K
Sbjct: 65 LNVDGAGDEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPADKAGG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+I++ ++++ +SCLPK+LP+FIE++L + V IHLSDI LP GV + +++ +A
Sbjct: 125 VVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITLPIGVELSTRLDKEHDMA 184
Query: 181 TAIIPVNTLESD 192
I +E D
Sbjct: 185 VVIAKHAVIEDD 196
>gi|120555278|ref|YP_959629.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter
aquaeolei VT8]
gi|387813299|ref|YP_005428781.1| 50S ribosomal protein L25, general stress protein CTC [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|166223694|sp|A1U373.1|RL25_MARAV RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120325127|gb|ABM19442.1| LSU ribosomal protein L25P [Marinobacter aquaeolei VT8]
gi|381338311|emb|CCG94358.1| 50S ribosomal protein L25, general stress protein CTC [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 212
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
I AF R +G SR LR+ K+P IIYGG KD +++ HN + A++ E F S IL
Sbjct: 7 IEAFPRDDQGKGASRRLRREERKIPAIIYGGGKDATPVAIWHNELKKAIENEAFFSHILT 66
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++I GK E V+L++ Q H YK ++ HADF RVD + +IHV VPLHFIN + +PAVKL
Sbjct: 67 VDIQGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAPAVKLQGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
I+S+ ++++ + CLP+NLP+FIE++L ++E++ +HLSD+KLP+GV V
Sbjct: 127 IVSHTMTEVEVICLPQNLPEFIEVDLNEVEMDQVVHLSDLKLPKGVKV 174
>gi|418529125|ref|ZP_13095065.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas
testosteroni ATCC 11996]
gi|371453551|gb|EHN66563.1| 50S ribosomal protein L25/general stress protein Ctc [Comamonas
testosteroni ATCC 11996]
Length = 207
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 125/186 (67%), Gaps = 2/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ +A ER K+GT SR LR GK PGI+YG + + I ++HN ++HA+ KE FHSSIL
Sbjct: 1 MQFVATERAKQGTGASRRLRLSGKTPGIVYGAGEAQL-IEIDHNALWHAVHKEAFHSSIL 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++I G+V V+LR+ Q H YKKLV H DFQRVD K+H+ VPLHF + SPAVK +
Sbjct: 60 DMDINGQVTKVVLRDVQFHPYKKLVQHIDFQRVDGNTKLHMNVPLHFEGAAESPAVKGEN 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
C ++ ++ +L + C P NLP+FI+++L + + + L +KLP GV +V+ ++P++
Sbjct: 120 CTVTPLMHELQVICEPANLPEFIKVDLSALTSKSVLGLQALKLPNGVKAVVRGANKNPSL 179
Query: 180 ATAIIP 185
+ +P
Sbjct: 180 ISIKLP 185
>gi|168830302|gb|ACA34399.1| RplY [uncultured bacterium pTW2]
Length = 226
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 112/168 (66%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
KI A RK +G SR LR G+VP I+YGG+ DPV I + H + + E F++SIL+
Sbjct: 5 KITATSRKDEGKGASRRLRHAGQVPAIVYGGHADPVSIQLEHERTWLVSQSEWFYASILD 64
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
LEI GK E VLLR+ Q H YK+ ++H DFQRV + I V VPLHF+N + SPA K
Sbjct: 65 LEIDGKSEKVLLRDMQRHPYKQRIMHMDFQRVSANEAIRVSVPLHFLNVDKSPAGKTAGV 124
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++ + ++ + +SCLP +LP+FI+I+L ++ ++HLS ++LP+GV V
Sbjct: 125 VVMHELTQIEVSCLPGDLPEFIDIDLSNLQAGDTMHLSQVQLPKGVEV 172
>gi|21230347|ref|NP_636264.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769659|ref|YP_244421.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. 8004]
gi|71153677|sp|Q8PC62.1|RL25_XANCP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|81304386|sp|Q4URC2.1|RL25_XANC8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|21111900|gb|AAM40188.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574991|gb|AAY50401.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. 8004]
Length = 209
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 111/162 (68%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+L + G
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHFIN ISPA K + ++++ +
Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEAISPAGKSSEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+FIEI+L +EV IHLS+I LP GV +
Sbjct: 132 NEVQVVCLPKDLPEFIEIDLSTLEVGAVIHLSEITLPAGVEI 173
>gi|384418018|ref|YP_005627378.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353460931|gb|AEQ95210.1| ribosomal protein L25, Ctc-form [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 211
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 115/168 (68%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+
Sbjct: 6 EIKAERRADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILD 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHFIN + SPA K +
Sbjct: 66 LNLNGDVQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEDASPAGKSSEV 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++++ ++++ + CLPK+LP+FIE++L +EV IHLS+IKLP GV +
Sbjct: 126 VVTHELNEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEI 173
>gi|374621845|ref|ZP_09694374.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Ectothiorhodospira sp. PHS-1]
gi|373940975|gb|EHQ51520.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Ectothiorhodospira sp. PHS-1]
Length = 209
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 114/166 (68%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R +G SR LR+ GK+P I+YGG+K+PV I+++HN ++ +L E F+S IL L++
Sbjct: 9 AEPRADQGKGASRRLRRAGKLPAIVYGGDKEPVAITLDHNTVWLSLAHEAFYSHILTLKV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK E V+LR+ Q H K++VLH D QRV ++ I V VPLHFIN +I VK +IS
Sbjct: 69 DGKSERVILRDLQRHPVKQMVLHMDLQRVTDDQAIKVHVPLHFINEDICVGVKTGGGMIS 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ ++ + CLPK+LP+FIE+++ + V S+HLS I+LP GVS++
Sbjct: 129 HQAMEVEVECLPKDLPEFIEVDVAALNVGDSLHLSQIQLPEGVSIV 174
>gi|289663466|ref|ZP_06485047.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289667603|ref|ZP_06488678.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 210
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 111/162 (68%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+L + G
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHFIN SPA K + ++++ +
Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEAASPAGKSSEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+FIE++L +EV IHLS+IKLP GV +
Sbjct: 132 NEVQVVCLPKDLPEFIEVDLGALEVGDVIHLSEIKLPAGVEI 173
>gi|384426742|ref|YP_005636099.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. raphani 756C]
gi|341935842|gb|AEL05981.1| ribosomal protein L25, Ctc-form [Xanthomonas campestris pv. raphani
756C]
Length = 209
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 111/162 (68%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+L + G
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHFIN SPA K + ++++ +
Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEASSPAGKSSEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+FIE++L +EV T IHLS+I LP GV +
Sbjct: 132 NEVQVVCLPKDLPEFIEVDLSTLEVGTVIHLSEITLPAGVEI 173
>gi|294627824|ref|ZP_06706403.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292597738|gb|EFF41896.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 211
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 111/162 (68%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+L + G
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGG 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHFIN SPA K + ++++ +
Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEASSPAGKSSEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+FIE++L +EV IHLS+IKLP GV +
Sbjct: 132 NEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEI 173
>gi|21241720|ref|NP_641302.1| 50S ribosomal protein L25 [Xanthomonas axonopodis pv. citri str.
306]
gi|78046537|ref|YP_362712.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|294666031|ref|ZP_06731293.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325928009|ref|ZP_08189227.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118]
gi|346723861|ref|YP_004850530.1| 50S ribosomal protein L25 [Xanthomonas axonopodis pv. citrumelo F1]
gi|381171815|ref|ZP_09880955.1| ribosomal protein L25 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|418518293|ref|ZP_13084442.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|418523113|ref|ZP_13089137.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|71153676|sp|Q8PNT9.1|RL25_XANAC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893405|sp|Q3BX01.1|RL25_XANC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|21107089|gb|AAM35838.1| 50S ribosomal protein L25 [Xanthomonas axonopodis pv. citri str.
306]
gi|78034967|emb|CAJ22612.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|292604223|gb|EFF47612.1| 50S ribosomal protein L25 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325541623|gb|EGD13147.1| LSU ribosomal protein L25P [Xanthomonas perforans 91-118]
gi|346648608|gb|AEO41232.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. citrumelo F1]
gi|380687775|emb|CCG37442.1| ribosomal protein L25 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|410700269|gb|EKQ58831.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410704370|gb|EKQ62854.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 211
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 111/162 (68%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+L + G
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHFIN SPA K + ++++ +
Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEASSPAGKSSEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+FIE++L +EV IHLS+IKLP GV +
Sbjct: 132 NEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEI 173
>gi|188992871|ref|YP_001904881.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris
str. B100]
gi|226694602|sp|B0RU99.1|RL25_XANCB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|167734631|emb|CAP52841.1| 50S ribosomal protein L25 [Xanthomonas campestris pv. campestris]
Length = 209
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 110/162 (67%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+L + G
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHFIN SPA K + ++++ +
Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSASVPLHFINEASSPAGKSSEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+FIEI+L +EV IHLS+I LP GV +
Sbjct: 132 NEVQVVCLPKDLPEFIEIDLSTLEVGAVIHLSEITLPAGVEI 173
>gi|390991980|ref|ZP_10262229.1| ribosomal protein L25, Ctc-form [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372553267|emb|CCF69204.1| ribosomal protein L25, Ctc-form [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 211
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 111/162 (68%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+L + G
Sbjct: 12 RVDEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHFIN SPA K + ++++ +
Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFINEASSPAGKSSEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+FIE++L +EV IHLS+IKLP GV +
Sbjct: 132 NEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEI 173
>gi|325914244|ref|ZP_08176594.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937]
gi|325539499|gb|EGD11145.1| LSU ribosomal protein L25P [Xanthomonas vesicatoria ATCC 35937]
Length = 211
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 111/162 (68%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+L + G
Sbjct: 12 RADEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHF+N SPA K + ++++ +
Sbjct: 72 VQQVLLRDMQRHPFKQLIMHIDFQRVSANEKLSAAVPLHFVNEASSPAGKSSEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+FIE++L +EV IHLS+IKLP GV +
Sbjct: 132 NEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEIKLPAGVEI 173
>gi|190572919|ref|YP_001970764.1| 50S ribosomal protein L25/general stress protein Ctc
[Stenotrophomonas maltophilia K279a]
gi|424667179|ref|ZP_18104204.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia Ab55555]
gi|190010841|emb|CAQ44450.1| putative 50S ribosomal protein L25 [Stenotrophomonas maltophilia
K279a]
gi|401069848|gb|EJP78369.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia Ab55555]
gi|456738073|gb|EMF62750.1| LSU ribosomal protein L25p [Stenotrophomonas maltophilia EPM1]
Length = 205
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 120/169 (71%), Gaps = 2/169 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ E ++KG S R LR G +P I+YGGN +PV IS++HN I+ A + E F++SIL
Sbjct: 7 IKVTKRELQRKGAS--RRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWFYASIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + G+V+ VLLR+ Q H YK+L++H DFQRV+ + + VPLHF+N + SPA K
Sbjct: 65 DLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFVNEDTSPAGKAAD 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++++ + ++ I+CLPK+LP+ IE++L +++ ++LSDIKLP+GV +
Sbjct: 125 VVVTHELKEVTITCLPKDLPESIEVDLGELKAGDVVYLSDIKLPKGVEI 173
>gi|149378000|ref|ZP_01895725.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
algicola DG893]
gi|149357709|gb|EDM46206.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
algicola DG893]
Length = 217
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 117/168 (69%), Gaps = 1/168 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
I AF R +G SR LR+ K+P IIYGG K+ IS+ HN + AL+ E F S IL
Sbjct: 7 IEAFPRGDQGRGASRRLRREERKIPAIIYGGKKEATAISIWHNELKKALENEAFFSHILT 66
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+E+ GK E V+L++ Q H YK L+ HADF RVD + +IHV VPLHF+N E +PA+KL
Sbjct: 67 IELEGKKESVILKDLQRHPYKPLLTHADFLRVDKDHEIHVNVPLHFLNEESAPAIKLQGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ ++ I+++ + CLP+NLP+F+E+++ +E++ +HLSD+KLP+GV +
Sbjct: 127 VANHQINEVEVICLPQNLPEFLEVDMTSVEMDQVVHLSDLKLPKGVRI 174
>gi|389795955|ref|ZP_10199061.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
fulvus Jip2]
gi|388430005|gb|EIL87219.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
fulvus Jip2]
Length = 227
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 115/169 (68%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A RK +G SR LR+ VP ++YGG++ P I + HN I A K E+F SS+L
Sbjct: 5 LEIKAQSRKDEGKGASRRLRRAAYVPAVVYGGDQAPESIQIEHNTILLAAKNESFFSSVL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + GKV+ VL+R++Q H +K+L++H DF R+D K+ VPLHF+N E SPA K++
Sbjct: 65 DLNVDGKVQKVLVRDWQKHPFKQLMMHMDFLRIDENAKLRANVPLHFLNQETSPAGKMSG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+IS+ ++++ +SCLPK+LP FIE++L +E IHLS +KLP V +
Sbjct: 125 VVISHNLTEVEVSCLPKDLPAFIELDLGAVEAGDIIHLSQLKLPANVEL 173
>gi|380510761|ref|ZP_09854168.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
sacchari NCPPB 4393]
Length = 215
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 115/162 (70%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +G SR LR+ G +P I+YGG+ PV I ++HN ++ A + + F+SSIL+L + G
Sbjct: 12 REVEGKGASRRLRRDGLIPAIVYGGDLKPVNIQLDHNEVWLASQNDWFYSSILSLSLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV+ + +H VPLHFIN ++SPA K ++++ +
Sbjct: 72 VQKVLLRDMQRHPFKQLIMHIDFQRVNDNEALHASVPLHFINEDVSPAGKSAEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+F+E++L + V IHLSD+KLP GV +
Sbjct: 132 NEIQVVCLPKDLPEFVEVDLASLSVGDVIHLSDLKLPAGVEL 173
>gi|254525296|ref|ZP_05137351.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14]
gi|219722887|gb|EED41412.1| ribosomal protein L25, Ctc-form [Stenotrophomonas sp. SKA14]
Length = 205
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 118/169 (69%), Gaps = 2/169 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ E ++KG S R LR G +P I+YGGN +PV IS++HN I+ A + E F++SIL
Sbjct: 7 IKVTKRELQRKGAS--RRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWFYASIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + G+V+ VLLR+ Q H YK+L++H DFQRV+ + + VPLHFIN + SPA K
Sbjct: 65 DLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFINEDTSPAGKAAD 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++++ + ++ ISCLPK+LP+ IE++L + ++LS+IKLP+GV +
Sbjct: 125 VVVTHELKEVTISCLPKDLPESIEVDLADLAAGDVVYLSNIKLPKGVEI 173
>gi|194364505|ref|YP_002027115.1| 50S ribosomal protein L25/general stress protein Ctc
[Stenotrophomonas maltophilia R551-3]
gi|194347309|gb|ACF50432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Stenotrophomonas maltophilia R551-3]
Length = 206
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 126/185 (68%), Gaps = 5/185 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ E ++KG S R LR G +P I+YGGN +PV +S++HN I+ A + E F++SIL
Sbjct: 7 IKVTKRELQRKGAS--RRLRHAGVIPAIVYGGNAEPVAVSLDHNEIWLAQQNEWFYASIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + G+V+ VLLR+ Q H YK+L++H DF RV+ +K+ VPLHFIN + SPA K
Sbjct: 65 DLNLDGQVQKVLLRDMQRHPYKQLIMHLDFLRVNENEKLTASVPLHFINEDTSPAGKAAD 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV---SVIHSTEEDP 177
++++ + ++ ISCLPK+LP+ IE++L +++ ++LSDIKLP+GV ++ + D
Sbjct: 125 VVVAHELKEVSISCLPKDLPESIEVDLGELKAGDIVYLSDIKLPKGVEIPALALGKDHDD 184
Query: 178 TIATA 182
I TA
Sbjct: 185 AIVTA 189
>gi|325921463|ref|ZP_08183318.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865]
gi|325548010|gb|EGD19009.1| LSU ribosomal protein L25P [Xanthomonas gardneri ATCC 19865]
Length = 211
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 110/162 (67%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G +P I+YGG +PV I +NH I+ A + E F+SSIL+L + G
Sbjct: 12 RANEGKGASRRLRHAGVIPAIVYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+L++H DFQRV +K+ VPLHF+N SPA K + ++++ +
Sbjct: 72 VQQVLLRDMQRHPFKQLIIHIDFQRVSANEKLSAAVPLHFVNEATSPAGKSSEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+FIE++L +EV IHLS+I LP GV +
Sbjct: 132 NEVQVVCLPKDLPEFIEVDLGALEVGNVIHLSEITLPAGVEI 173
>gi|358451352|ref|ZP_09161786.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter
manganoxydans MnI7-9]
gi|357224585|gb|EHJ03116.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter
manganoxydans MnI7-9]
Length = 216
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
I AF R +G SR LR+ K+P IIYGGNKD I++ HN + AL+ E F S +L
Sbjct: 7 IEAFPRDDQGRGASRRLRREERKIPAIIYGGNKDATPIAIWHNELKKALENEAFFSHVLT 66
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+E+ GK E V+L++ Q H YK ++ HADF RVD + +IHV VPLHFIN + +PA+KL+
Sbjct: 67 VELNGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAPAIKLHGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ ++ I+++ + CLP+NLP+FIE+++ +E++ +HLSD+KLP+ V +
Sbjct: 127 VANHQINEVEVICLPQNLPEFIEVDMTSVEMDQVVHLSDLKLPKDVKI 174
>gi|83644562|ref|YP_432997.1| 50S ribosomal protein L25/general stress protein Ctc [Hahella
chejuensis KCTC 2396]
gi|109893366|sp|Q2SLA2.1|RL25_HAHCH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|83632605|gb|ABC28572.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hahella
chejuensis KCTC 2396]
Length = 208
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 115/170 (67%), Gaps = 1/170 (0%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R +G SR LR++ GKVPGIIYGG PV IS++HN + HAL+ E F+S IL L+
Sbjct: 9 AEKRDVQGKGASRRLRRVDGKVPGIIYGGETAPVAISVSHNQLSHALQNEAFYSHILTLD 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G E V+L++ Q H YK +++HADF RV ++K+HV VPLHFIN + V+ I
Sbjct: 69 VEGTNESVILKDLQRHPYKPIIMHADFLRVQKDQKLHVNVPLHFINEDKCEGVRQGGGSI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST 173
S+ +++ + CLP NLP+FIE+++ ++V +HLSD+KLP GV + T
Sbjct: 129 SHQQTEVEVICLPANLPEFIEVDMTSVQVEQILHLSDLKLPEGVELAELT 178
>gi|433679030|ref|ZP_20510814.1| large subunit ribosomal protein L25 [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430815854|emb|CCP41359.1| large subunit ribosomal protein L25 [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 215
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 113/162 (69%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +G SR LR+ G +P I+YGG PV I +NHN ++ A + + F+SSIL+L + G
Sbjct: 12 REVEGKGASRRLRRDGLIPAIVYGGELKPVNIQLNHNEVWLASQNDWFYSSILSLSLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++ VLLR+ Q H +K+L+LH DFQRV+ + +H VPLHF+N + SPA K ++++ +
Sbjct: 72 IQKVLLRDMQRHPFKQLILHIDFQRVNDNEALHASVPLHFLNEDASPAGKSAEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+F+E++L + V IHLSD+KLP GV +
Sbjct: 132 NEIQVVCLPKDLPEFVEVDLSALSVGDVIHLSDLKLPAGVEL 173
>gi|344206156|ref|YP_004791297.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia JV3]
gi|343777518|gb|AEM50071.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia JV3]
Length = 205
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 120/169 (71%), Gaps = 2/169 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ E ++KG S R LR G +P I+YGGN +PV IS++HN I+ A + E F++SIL
Sbjct: 7 IKVTKRELQRKGAS--RRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWFYASIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + G+V+ VLLR+ Q H YK+L++H DFQRV+ + + VPLHFIN + SPA K
Sbjct: 65 DLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFINEDTSPAGKAAD 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++++ + ++ I+CLPK+LP+ IE++L +++ ++LS+IKLP+GV +
Sbjct: 125 VVVTHELKEVTITCLPKDLPESIEVDLGELKAGDVVYLSNIKLPKGVEI 173
>gi|386717193|ref|YP_006183519.1| 50S ribosomal protein L25 [Stenotrophomonas maltophilia D457]
gi|408822214|ref|ZP_11207104.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
geniculata N1]
gi|384076755|emb|CCH11340.1| LSU ribosomal protein L25p [Stenotrophomonas maltophilia D457]
Length = 205
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 120/169 (71%), Gaps = 2/169 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ E ++KG S R LR G +P I+YGGN +PV IS++HN I+ A + E F++SIL
Sbjct: 7 IKVTKRELQRKGAS--RRLRHAGVIPAIVYGGNAEPVAISLDHNEIWLAQQNEWFYASIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + G+V+ VLLR+ Q H YK+L++H DFQRV+ + + VPLHF+N + SPA K
Sbjct: 65 DLNLDGQVQKVLLRDMQRHPYKQLIMHLDFQRVNENEALTASVPLHFVNEDTSPAGKAAD 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++++ + ++ I+CLPK+LP+ IE++L +++ ++LS+IKLP+GV +
Sbjct: 125 VVVTHELKEVTITCLPKDLPESIEVDLGELKAGDVVYLSNIKLPKGVEI 173
>gi|385330447|ref|YP_005884398.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
adhaerens HP15]
gi|311693597|gb|ADP96470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
adhaerens HP15]
Length = 223
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
I AF R +G SR LR+ K+P IIYGGNKD I++ HN + AL+ E F S +L
Sbjct: 14 IEAFPRDDQGRGASRRLRREERKIPAIIYGGNKDATPIAIWHNELKKALENEAFFSHVLT 73
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+E+ GK E V+L++ Q H YK ++ HADF RVD + +IHV VPLHFIN + +PA+KL+
Sbjct: 74 VELNGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAPAIKLHGG 133
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ ++ I+++ + CLP+NLP+FIE+++ +E++ +HLSD+KLP+ V +
Sbjct: 134 VANHQINEVEVICLPQNLPEFIEVDMTTVEMDQVVHLSDLKLPKDVKI 181
>gi|399543897|ref|YP_006557205.1| 50S ribosomal protein L25 [Marinobacter sp. BSs20148]
gi|399159229|gb|AFP29792.1| 50S ribosomal protein L25 [Marinobacter sp. BSs20148]
Length = 209
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 123/183 (67%), Gaps = 4/183 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
I AF R +G SR LR+ K+P IIYGG+K+ V IS+ HN + AL+ E F+S +L
Sbjct: 7 IEAFPRDDQGRGASRRLRREERKIPAIIYGGHKEAVPISIWHNELKKALENEAFYSRVLT 66
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+E+ GK E V+L++ Q H YK L+ HADFQR++ +++I V VPLH +N E +PA+K
Sbjct: 67 IELNGKKESVILKDLQRHPYKPLLSHADFQRINKDEEIFVHVPLHLVNEETAPAIKTFGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV---SVIHSTEEDPT 178
+ +++ + ++CLP+NLP+FIEI+L +E++ +H+SD+KLP GV ++ H E D
Sbjct: 127 VAFRLMTQVEVACLPQNLPEFIEIDLFDVEMDGIVHMSDLKLPEGVRIPALQHGAEHDQA 186
Query: 179 IAT 181
I T
Sbjct: 187 IVT 189
>gi|440732738|ref|ZP_20912543.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
translucens DAR61454]
gi|440367508|gb|ELQ04569.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
translucens DAR61454]
Length = 215
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 113/162 (69%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +G SR LR+ G +P I+YGG PV I +NHN ++ A + + F+SSIL+L + G
Sbjct: 12 REVEGKGASRRLRRDGLIPAIVYGGELKPVNIQLNHNEVWLASQNDWFYSSILSLSLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++ VLLR+ Q H +K+L+LH DFQRV+ + +H VPLHF+N + SPA K ++++ +
Sbjct: 72 IQKVLLRDMQRHPFKQLILHIDFQRVNDNEALHASVPLHFLNEDASPAGKSVEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+F+E++L + V IHLSD+KLP GV +
Sbjct: 132 NEIQVVCLPKDLPEFVEVDLSALSVGDVIHLSDLKLPAGVEL 173
>gi|126665169|ref|ZP_01736152.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
sp. ELB17]
gi|126630539|gb|EBA01154.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
sp. ELB17]
Length = 211
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
I AF R +G SR LR+ K+P IIYGG+KD IS+ HN + AL+ E F+S +L
Sbjct: 7 IEAFPRDDQGRGASRRLRRQERKIPAIIYGGHKDATPISIWHNELKKALENEAFYSRVLT 66
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+E+ G+ E V+L++ Q H YK L+ HADFQR++ +++I V VPLH +N E +PA+K
Sbjct: 67 IELNGEKESVILKDLQRHPYKPLLSHADFQRINKDEEIFVHVPLHLVNEETAPAIKTFGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV---SVIHSTEEDPT 178
+ +++ + ++CLP+NLP+FIEI+L +E++ +H+SD+KLP GV ++ H E D
Sbjct: 127 VAFRLMTQVEVACLPQNLPEFIEIDLFDVEMDGIVHMSDLKLPEGVRIPALQHGAEHDQA 186
Query: 179 IAT 181
I T
Sbjct: 187 IVT 189
>gi|285017303|ref|YP_003375014.1| 50S ribosomal protein L25 [Xanthomonas albilineans GPE PC73]
gi|283472521|emb|CBA15026.1| putative 50s ribosomal protein l25 [Xanthomonas albilineans GPE
PC73]
Length = 214
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 115/162 (70%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +G SR LR+ G +P I+YGG+ PV I ++HN ++ A + + F+SSIL+L + G
Sbjct: 12 REVEGKGASRRLRRDGVIPAIVYGGDLKPVNIQLDHNEVWLASQNDWFYSSILSLSLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H YK+L++H DFQRV+ + +H VPLHF++ ++SPA K ++++ +
Sbjct: 72 VQKVLLRDMQRHPYKQLIMHIDFQRVNDNEVLHASVPLHFLHEDVSPAGKSAEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+F+E++L + V IHLSD+KLP GV +
Sbjct: 132 NEIQVVCLPKDLPEFVEVDLSTLSVGDVIHLSDLKLPAGVEL 173
>gi|357418247|ref|YP_004931267.1| 50S ribosomal protein L25/general stress protein Ctc
[Pseudoxanthomonas spadix BD-a59]
gi|355335825|gb|AER57226.1| 50S ribosomal protein L25/general stress protein Ctc
[Pseudoxanthomonas spadix BD-a59]
Length = 219
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 110/162 (67%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR+ G VP I+YGG PV I +NHN ++ A + + F+SSIL+L + G
Sbjct: 12 RADEGKGASRRLRRAGSVPAIVYGGELKPVSIQINHNEVWTASQHDWFYSSILDLSLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H +K+ ++H DFQRV+ + + VPLHF+N E SPA K + +I++ +
Sbjct: 72 VQKVLLRDMQRHPFKQQIMHLDFQRVNDRETLRTAVPLHFLNQETSPAGKSSEVVITHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLP +LP+FIE++L M IHLS++KLP+GV +
Sbjct: 132 NEVVVECLPADLPEFIEVDLGNMVQGDVIHLSELKLPKGVEI 173
>gi|424795616|ref|ZP_18221442.1| 50S ribosomal protein L25 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795381|gb|EKU24089.1| 50S ribosomal protein L25 [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 215
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 113/162 (69%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +G SR LR+ G +P I+YGG PV I +NHN ++ A + + F+SSIL+L + G
Sbjct: 12 REVEGKGASRRLRRDGLIPAIVYGGELKPVNIQLNHNEVWLASQNDWFYSSILSLSLNGD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++ VLLR+ Q H +K+L+LH DFQRV+ + +H VPLHF+N + SPA K ++++ +
Sbjct: 72 IQKVLLRDMQRHPFKQLILHIDFQRVNDNEVLHASVPLHFLNEDSSPAGKSVEVVVTHEL 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ + CLPK+LP+F+E++L + V IHLSD+KLP GV +
Sbjct: 132 NEIQVVCLPKDLPEFVEVDLSALSVGDVIHLSDLKLPAGVEL 173
>gi|406938636|gb|EKD71827.1| hypothetical protein ACD_46C00088G0003 [uncultured bacterium]
Length = 235
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ G SR LR+ KVPG++YGG K+ V I++ HN + AL+ E F+S IL
Sbjct: 8 EIEASVRQNMGKGASRRLRREEKVPGVVYGGGKNAVSITIEHNKMSKALEIEAFYSHILT 67
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + E V+L++ Q H +K ++H DFQRV ++K+H+ +PLHF E SP VK
Sbjct: 68 LRTGTESERVILKDVQRHPFKPRIMHIDFQRVRADEKLHMHIPLHFKGGENSPGVK-EGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+IS+++SD+ +SCLP NLP++IE+++ +M +N +HLSDIKLP+GV ++ T +D
Sbjct: 127 LISHIMSDIEVSCLPDNLPEYIELDISEMALNQILHLSDIKLPKGVEIVALTHDD 181
>gi|383315921|ref|YP_005376763.1| 50S ribosomal protein L25 [Frateuria aurantia DSM 6220]
gi|379043025|gb|AFC85081.1| ribosomal protein L25, Ctc-form [Frateuria aurantia DSM 6220]
Length = 212
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 114/184 (61%), Gaps = 3/184 (1%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR VP ++YG K P I + HN I A + E F SS+L+
Sbjct: 6 EIKAESRKDEGKGASRRLRHAAYVPAVVYGAGKAPQSIQIEHNTILLAARHEWFFSSVLD 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L I G VE VL+R++Q H +K+ +LH DFQRVD + VPLHF+N + SPA K +
Sbjct: 66 LNIDGNVEKVLVRDWQKHPFKQQMLHMDFQRVDQNALLRANVPLHFLNQDTSPAGKASHV 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH---STEEDPT 178
++S+ ++++ ++CLPK+LP+FIE++L + IHLS IKLP GV+ + E D
Sbjct: 126 VVSHALTEVEVTCLPKDLPEFIEVDLASLTEGDIIHLSQIKLPAGVTSVQLALGEEHDVA 185
Query: 179 IATA 182
+ TA
Sbjct: 186 VVTA 189
>gi|389737032|ref|ZP_10190525.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 115]
gi|388437814|gb|EIL94578.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 115]
Length = 218
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 119/184 (64%), Gaps = 3/184 (1%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR G VP ++YG + P I + HN I A K E F SSIL+
Sbjct: 6 EIKAQSRKDEGKGASRRLRHAGFVPAVVYGAEQAPQNIQIEHNTILLAAKHEWFFSSILD 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + GKV+ VL+R++Q H +K+L++H DF R++ ++ + V VPLHF+N E S A K +
Sbjct: 66 LNVDGKVQKVLVRDWQKHPFKQLMMHMDFLRINEKEALRVSVPLHFLNQEASAAGKTSGV 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV--IH-STEEDPT 178
+IS+ +++L ISCLPKNLP+FIE++L ++ IH+S IKLP GV + +H D
Sbjct: 126 VISHNLTELEISCLPKNLPEFIELDLADLKPGDIIHMSQIKLPAGVEIPALHLGASHDSA 185
Query: 179 IATA 182
+ TA
Sbjct: 186 VVTA 189
>gi|350552099|ref|ZP_08921306.1| 50S ribosomal protein L25 [Thiorhodospira sibirica ATCC 700588]
gi|349795165|gb|EGZ48968.1| 50S ribosomal protein L25 [Thiorhodospira sibirica ATCC 700588]
Length = 211
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 113/169 (66%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
++ A R +G SR LR+ GK+P I+YG K+P IS++HN I L E F+S IL
Sbjct: 6 ELQAESRTDQGKGASRRLRRAGKLPAILYGAGKEPQSISLDHNTILLNLAHEAFYSHILT 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + GK E V+LR+ Q H +K ++LH D QRV +KI + VPLHFIN + VKL
Sbjct: 66 LTLNGKTERVILRDLQRHPFKPVILHLDLQRVSEGEKIRMHVPLHFINEQNCVGVKLGGG 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+I++ ++D+ + CLP++LP+FIE+++ M+ S+HLS +++P+GV+++
Sbjct: 126 MITHQLTDVEVECLPEHLPEFIEVDVANMQAGESLHLSQLQMPQGVTLV 174
>gi|430761937|ref|YP_007217794.1| LSU ribosomal protein L25p [Thioalkalivibrio nitratireducens DSM
14787]
gi|430011561|gb|AGA34313.1| LSU ribosomal protein L25p [Thioalkalivibrio nitratireducens DSM
14787]
Length = 212
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 119/186 (63%), Gaps = 3/186 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R ++G+S SR LR+ GK+PGI+YGG++DPV I+++HN I LK + F+S IL +
Sbjct: 7 IEAEPRLEQGSSASRRLRRAGKLPGILYGGHEDPVTITLDHNAILQNLKHDAFYSHILTV 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+ GK E +LR+ Q H +K ++H D RV ++ I V VPLHF+N EI VK +
Sbjct: 67 NLSGKTERAILRDVQRHPFKPTLVHVDLLRVSADEAIRVHVPLHFVNEEICKGVKTGGGM 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV---IHSTEEDPTI 179
I+ ++++ + CLP NLP+ I +++ ++ V ++HLSD+ LP VSV + + D +
Sbjct: 127 INRQLTEVEVECLPANLPESIVVDVAELGVGETLHLSDLALPERVSVVALVQGGDHDTAV 186
Query: 180 ATAIIP 185
+ ++P
Sbjct: 187 VSVLMP 192
>gi|389807566|ref|ZP_10204155.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
thiooxydans LCS2]
gi|388443890|gb|EIM00022.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
thiooxydans LCS2]
Length = 221
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 122/191 (63%), Gaps = 5/191 (2%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR+ VP ++YG + P I + HN I A K E F SS+LN
Sbjct: 6 EIKAQSRKDEGKGASRRLRRASFVPAVVYGAGQAPESIQIEHNTILLAAKNEWFFSSVLN 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + GKV+ VL+R++Q H +K+L++H DF RVD + I V VPLHF+N E S A K +
Sbjct: 66 LNVDGKVQKVLVRDWQKHPFKQLMMHMDFLRVDEKAAIRVSVPLHFLNKEKSAAAKTSGV 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI--HSTEEDPTI 179
+IS+ ++++ I+CLPK+LP+ IE++L ++ IHLS +KLP+ V ++ H E
Sbjct: 126 VISHNLTEVEITCLPKDLPESIELDLADLKPGDIIHLSQLKLPKNVELVALHGGEGHD-- 183
Query: 180 ATAIIPVNTLE 190
TA++ NT++
Sbjct: 184 -TAVVTANTVQ 193
>gi|333893689|ref|YP_004467564.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
sp. SN2]
gi|332993707|gb|AEF03762.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
sp. SN2]
Length = 210
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 120/179 (67%), Gaps = 1/179 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR+ K+PGIIYGG + PV I+++HN + +A E F+S +L L + GK
Sbjct: 13 RTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNAADFEAFYSHVLTLNVDGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL+++ Q HA+K +LH DFQRV +++H VPLHFIN + S A+K I + +
Sbjct: 73 AVEVLVKDMQRHAFKPRILHVDFQRVIAGQELHTNVPLHFINEDKSAAIKAGG-IAEHHV 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+++ I+CLPK+LP+FIE+++ +E+++++HLSD+ LP G++ + ++D T A++ V
Sbjct: 132 NEIEITCLPKDLPEFIEVDIANVEMDSTLHLSDLTLPAGITSVELGKDDETHDLAVVTV 190
>gi|289207531|ref|YP_003459597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sp. K90mix]
gi|288943162|gb|ADC70861.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sp. K90mix]
Length = 228
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 121/186 (65%), Gaps = 3/186 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A +R ++G+S SR LR+ GK+P I+YGG D I+++HN + H LK + F+S IL +
Sbjct: 7 IEAEKRDEQGSSASRRLRRAGKLPAILYGGENDAQPITLDHNAMVHNLKHDAFYSHILTV 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ GK E +LR+ Q H +K + H D RV + I V VPLHF N E VKL +
Sbjct: 67 KLDGKSEKAILRDVQRHPFKPTIYHVDLLRVSANQPIRVHVPLHFHNEEECKGVKLGGGM 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG---VSVIHSTEEDPTI 179
+S +++D+ + CLP +LP+ I+I++ +M+V +IH+S++KLP+G V+++H + D +
Sbjct: 127 VSRMLNDIEVECLPGDLPESIDIDVAEMDVGDTIHISELKLPKGVESVALMHGDDYDYAV 186
Query: 180 ATAIIP 185
+ ++P
Sbjct: 187 VSVLLP 192
>gi|392950437|ref|ZP_10315992.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
gi|392950624|ref|ZP_10316179.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
gi|391859399|gb|EIT69927.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
gi|391859586|gb|EIT70114.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
Length = 224
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 113/181 (62%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R +GT SR LR G VPGI+YGG K+P IS+NHN ++ LK E F+S+I+ L
Sbjct: 7 IEAEARSAQGTGASRRLRHAGSVPGIVYGGKKEPQMISVNHNELWKQLKLEAFYSAIITL 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+ G+ E V+L++ H ++ VLH D QR+ + + ++VPLHF +++P VK
Sbjct: 67 NVGGESEQVVLKDLHRHPVREQVLHLDLQRIQADVALRIRVPLHFKGGDVAPGVKTGGGY 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ ++++++ + CLPK+LP+ EI++ + VN SIHLS I LP GV+ + ++ A
Sbjct: 127 VEHLLNEVEVECLPKDLPEAFEIDISGLNVNESIHLSQIALPEGVAFVELKHDNDLAVVA 186
Query: 183 I 183
I
Sbjct: 187 I 187
>gi|389799528|ref|ZP_10202508.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 116-2]
gi|388442208|gb|EIL98418.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 116-2]
Length = 221
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 122/191 (63%), Gaps = 5/191 (2%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR+ VP ++YG + P I + HN I A K E F SS+L+
Sbjct: 6 EIKAQSRKDEGKGASRRLRRASFVPAVVYGAGQAPESIQIEHNTILLAAKNEWFFSSVLD 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + GKV+ VL+R++Q H +K+L++H DF RVD + I V VPLHF+N E S A K +
Sbjct: 66 LNVDGKVQKVLVRDWQKHPFKQLMMHMDFLRVDEKAAIRVSVPLHFLNKEKSAAAKTSGV 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI--HSTEEDPTI 179
+IS+ ++++ I+CLPK+LP+ IE++L ++ IHLS +KLP+ V ++ H E
Sbjct: 126 VISHNLTEVEITCLPKDLPESIELDLADLKPGDIIHLSQLKLPKNVELVALHGGEGHD-- 183
Query: 180 ATAIIPVNTLE 190
TA++ NT++
Sbjct: 184 -TAVVTANTVQ 193
>gi|352086255|ref|ZP_08953796.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodanobacter
sp. 2APBS1]
gi|351679554|gb|EHA62691.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodanobacter
sp. 2APBS1]
Length = 221
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 122/191 (63%), Gaps = 5/191 (2%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR+ VP ++YG + P I + HN I A K E F SS+L+
Sbjct: 6 EIKAQSRKDEGKGASRRLRRASFVPAVVYGAGQAPESIQIEHNTILLAAKNEWFFSSVLD 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + GKV+ VL+R++Q H +K+L++H DF RVD + I V VPLHF+N E S A K +
Sbjct: 66 LNVDGKVQKVLVRDWQKHPFKQLMMHMDFLRVDEKAAIRVSVPLHFLNKEKSAAAKTSGV 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI--HSTEEDPTI 179
+IS+ ++++ I+CLPK+LP+ IE++L ++ IHLS +KLP+ V ++ H E
Sbjct: 126 VISHNLTEVEITCLPKDLPESIELDLADLKPGDIIHLSQLKLPKNVELVALHGGEGHD-- 183
Query: 180 ATAIIPVNTLE 190
TA++ NT++
Sbjct: 184 -TAVVTANTVQ 193
>gi|319787942|ref|YP_004147417.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudoxanthomonas suwonensis 11-1]
gi|317466454|gb|ADV28186.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudoxanthomonas suwonensis 11-1]
Length = 207
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 107/162 (66%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +G SR LR+ GKVP I+YGG PV I ++H ++ A + E F+SSIL+L + G
Sbjct: 11 REDEGKGASRRLRRDGKVPAIVYGGELAPVSIQLDHEKLWLAQQNEWFYSSILDLSLNGD 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ VLLR+ Q H YK+ ++H DFQRV ++ + VPL F+N SPA K +I + +
Sbjct: 71 VQKVLLRDMQRHPYKQQIMHLDFQRVSDDEVLRAAVPLRFVNEAKSPAGKTAGVVIMHEL 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+++ ++CLPK+LP+ IE++L + V +HLS +KLP GV +
Sbjct: 131 TEVNVACLPKDLPEAIEVDLSDLAVGGVVHLSGLKLPTGVEI 172
>gi|372268004|ref|ZP_09504052.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alteromonas
sp. S89]
Length = 210
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 118/185 (63%), Gaps = 5/185 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
K+ A R +G SR LR++ KVP IIYGG +P +S+ ++ AL+ E+F+SS+
Sbjct: 4 FKLNASLRSDEGKGASRRLRRLEAKVPAIIYGGKAEPQSVSLLQKDLFKALESESFYSSV 63
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ L + GK E V+LR+ Q H K ++LHADFQRV K+HVKVPLHF+N E S VK
Sbjct: 64 ITLSVEGKDETVILRDLQRHPAKAILLHADFQRVSANTKVHVKVPLHFLNEESSKGVKAG 123
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEED 176
I+S+ +++L I+ LP+FIE++L +E++ +IH+SDIKLP GV + H D
Sbjct: 124 G-IVSHTLNELDITAPASKLPEFIEVDLADLELDGTIHISDIKLPAGVESVDLAHGESHD 182
Query: 177 PTIAT 181
+A+
Sbjct: 183 LVVAS 187
>gi|221135305|ref|ZP_03561608.1| 50S ribosomal protein L25/general stress protein Ctc [Glaciecola
sp. HTCC2999]
Length = 209
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR KVP I+YG +K+PV +++ HN + A + E F+S +L L++ G+
Sbjct: 13 RTDLGKGASRRLRHADKVPAILYGADKEPVSLTLAHNKLMQAQEFEAFYSHVLTLDVDGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
L+++ Q H YK +LH DF RVD K +H VP+HFIN E +PA+K + +
Sbjct: 73 KVEALVKDMQRHPYKPKILHVDFLRVDASKAVHTNVPVHFINEETAPAIKTQGGHAEHHV 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ +SCLP LP+FIE++L +E+ ++HLSDI LP GVS I
Sbjct: 133 NEIEVSCLPSQLPEFIEVDLTNVELGQTLHLSDITLPEGVSSI 175
>gi|350560649|ref|ZP_08929489.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782917|gb|EGZ37200.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 212
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 117/186 (62%), Gaps = 3/186 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R ++G+S SR LR+ GK+P I+YGG+ DPV I+++HN I LK + F+S IL +
Sbjct: 7 IEAEPRLEQGSSASRRLRRAGKLPAILYGGHADPVAITLDHNAILLNLKHDAFYSHILTV 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+ GK E +LR+ Q H +K ++H D RV ++ I V VPL F+N +I VK +
Sbjct: 67 NLNGKSERAILRDVQRHPFKPTLVHVDLLRVSADEAIRVHVPLSFVNEDICKGVKTGGGM 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV---IHSTEEDPTI 179
I+ ++++ I CLP NLP+ IE+++ + V S+HLSD+ LP GV+V + + D +
Sbjct: 127 INRQLTEVEIECLPGNLPETIEVDVADLGVGDSLHLSDLALPEGVTVVALVQGGDHDTAV 186
Query: 180 ATAIIP 185
+ ++P
Sbjct: 187 VSVLMP 192
>gi|254491052|ref|ZP_05104233.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxidans DMS010]
gi|224463565|gb|EEF79833.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxydans DMS010]
Length = 240
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 118/169 (69%), Gaps = 2/169 (1%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
++ A R +G SR LR GK+P ++YG +KDPV IS+NHN L +E F++ IL
Sbjct: 17 EVQAEARTDEGKGASRRLRHAGKIPAVVYGADKDPVSISINHNQFLRHLDEEAFYAHILT 76
Query: 62 LEIYGKVELVLLRNFQLH-AYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L+I GK + V+L++ Q H A ++HADF RVD + ++ + VP+HFI +++P VK +
Sbjct: 77 LDIAGKKDQVVLKDLQRHPANDNKIIHADFLRVDAKHEMTMTVPVHFIGEDVAPGVK-DG 135
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+S++I+++ I+CLP++LP++IE ++ ME++ S+HL+++ LP+GVS+
Sbjct: 136 GQVSHMITEVEIACLPQDLPEYIEADISGMEMDGSLHLTELVLPKGVSL 184
>gi|153876444|ref|ZP_02003761.1| Ribosomal protein L25 [Beggiatoa sp. PS]
gi|152067092|gb|EDN66239.1| Ribosomal protein L25 [Beggiatoa sp. PS]
Length = 212
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
KI A R ++G +R LRK G VP IIYGG+K+P+ ++++HN + L+ E F+S IL
Sbjct: 4 FKIEAQLRTERGKGENRRLRKAGYVPAIIYGGDKEPISLTLSHNDLLRQLEHEAFYSRIL 63
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ I + E +L++ H Y+ +LH DFQRV +K++ +VPLHFIN S VKL
Sbjct: 64 TVNIDDQPEQAVLKDLHRHPYRPTILHLDFQRVSEAQKLYREVPLHFINESKSVGVKLGG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++S+ ++++ I C PK+LP+FIE++L ++ +N ++HLSD+ L GV ++ +D A
Sbjct: 124 GLVSHHLAEVEIRCFPKDLPEFIEVDLTEINLNDTVHLSDLVLSEGVEIVALISKD---A 180
Query: 181 TAIIPVNTLESDNNSSIEKE 200
+ +PV ++ + E+E
Sbjct: 181 SRNLPVASVNLPRGAQTEEE 200
>gi|345875161|ref|ZP_08826957.1| ribosomal protein L25, Ctc-form [Neisseria weaveri LMG 5135]
gi|417958141|ref|ZP_12601057.1| ribosomal protein L25, Ctc-form [Neisseria weaveri ATCC 51223]
gi|343967203|gb|EGV35452.1| ribosomal protein L25, Ctc-form [Neisseria weaveri ATCC 51223]
gi|343969588|gb|EGV37800.1| ribosomal protein L25, Ctc-form [Neisseria weaveri LMG 5135]
Length = 190
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 121/183 (66%), Gaps = 1/183 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++P ++YG ++PV I+++H +++AL KE+FH++++
Sbjct: 4 EIQATVRENQGTGASRRLRREGQIPAVLYGEGQEPVAITVDHKTVFYALAKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + GK + V++R+FQ+H +++ V H DFQ VD K + ++VPLH +N+E S AVKL
Sbjct: 64 LTLNGKTQDVIVRDFQMHPFRQEVQHIDFQAVDATKPVRIRVPLHIVNAETSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+S + + + + LPK++P +E++ + +HLSDIK P GV+ + + + D +A
Sbjct: 124 RVSLLNTTVEVVSLPKDIPAALELDCSSVVAGNILHLSDIKFPEGVASV-ALKRDANLAV 182
Query: 182 AII 184
A +
Sbjct: 183 ATV 185
>gi|386828642|ref|ZP_10115749.1| ribosomal protein L25, Ctc-form [Beggiatoa alba B18LD]
gi|386429526|gb|EIJ43354.1| ribosomal protein L25, Ctc-form [Beggiatoa alba B18LD]
Length = 207
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 116/179 (64%), Gaps = 4/179 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++IA R G SR LR+ KVP ++YG ++P+ ++++ I L+ E+F+S +L
Sbjct: 7 FEVIAQSRADIGKGASRRLRRDNKVPAVLYGATQEPISLTLSQKEISKHLEHESFYSHVL 66
Query: 61 NLEIYG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
++I G K E +L+ Q H Y+ +V+H DFQR++ +KIH+ VPLHFIN E AVK
Sbjct: 67 TIQIDGNKTEKAVLKAVQRHPYRPIVMHVDFQRINESEKIHMHVPLHFINEESCAAVKTQ 126
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV---IHSTEE 175
+IS+ +S++ I CLPK+LP++I I+LEK+E+ +IHLSD+ P GV + H EE
Sbjct: 127 GGVISHHLSEVEIYCLPKDLPEYIAIDLEKVELGQTIHLSDLVCPAGVEIAGLAHGDEE 185
>gi|261380302|ref|ZP_05984875.1| ribosomal protein L25, Ctc-form [Neisseria subflava NJ9703]
gi|284796815|gb|EFC52162.1| ribosomal protein L25, Ctc-form [Neisseria subflava NJ9703]
Length = 190
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F+E++ + +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTSVEVVALPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|389775873|ref|ZP_10193719.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
spathiphylli B39]
gi|388436936|gb|EIL93766.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
spathiphylli B39]
Length = 231
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 109/168 (64%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A RK +G SR LR VP ++YG + P I + HN I A K E F SS+L+
Sbjct: 6 EIKAQSRKDEGKGASRRLRHAAFVPAVVYGAGQPPESIQIEHNTILLAAKNEWFFSSVLD 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + GKV+ VL+R++Q H +K+L++H DF R+D K+ VPLHF+N E SPA K +
Sbjct: 66 LNVDGKVQKVLVRDWQKHPFKQLMMHMDFLRIDENAKLRANVPLHFLNQEKSPAGKTSGV 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+IS+ ++++ +SCLPK+LP +IE++L ++ IHLS +KLP V +
Sbjct: 126 VISHNLTEVEVSCLPKDLPAYIELDLGELVAGDIIHLSQLKLPANVEL 173
>gi|319638120|ref|ZP_07992883.1| 50S ribosomal protein L25 [Neisseria mucosa C102]
gi|317400393|gb|EFV81051.1| 50S ribosomal protein L25 [Neisseria mucosa C102]
Length = 190
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGEAKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F+E++ + +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTSVEVIALPANIPAFLELDCTSVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|406596330|ref|YP_006747460.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii ATCC 27126]
gi|406373651|gb|AFS36906.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii ATCC 27126]
Length = 210
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
K+ A R G SR LR+ K+PGIIYGG + PV I+++HN + ++ E F+S +L
Sbjct: 6 FKLDASVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAFYSHVL 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ + GKV VL+++ Q H +K + H DFQRV + +H VPLHF+N E S AVK
Sbjct: 66 EINLDGKVVEVLVKDMQRHPFKPKITHIDFQRVIAGQDVHTNVPLHFVNEEKSAAVKAGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I + ++++ ++CLPKNLP+FIE+++ +E+ ++HLSD+ LP GVS + + D
Sbjct: 126 -IAEHHVTEIEVTCLPKNLPEFIEVDMAGVEMGQTLHLSDLTLPAGVSSVELAKNDEAHD 184
Query: 181 TAIIPV 186
A++ V
Sbjct: 185 LAVVTV 190
>gi|268686237|ref|ZP_06153099.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-93-1035]
gi|268626521|gb|EEZ58921.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-93-1035]
Length = 190
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSMLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|407683278|ref|YP_006798452.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii str. 'English Channel 673']
gi|407687219|ref|YP_006802392.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|407699625|ref|YP_006824412.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii str. 'Black Sea 11']
gi|407244889|gb|AFT74075.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii str. 'English Channel 673']
gi|407248772|gb|AFT77957.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii str. 'Black Sea 11']
gi|407290599|gb|AFT94911.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 210
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
K+ A R G SR LR+ K+PGIIYGG + PV I+++HN + ++ E F+S +L
Sbjct: 6 FKLDASVRTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAFYSHVL 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ + GKV VL+++ Q H +K + H DFQRV + +H VPLHF+N E S AVK
Sbjct: 66 EINLDGKVVEVLVKDMQRHPFKPKITHIDFQRVIAGQDVHTNVPLHFVNEEKSAAVKAGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I + ++++ ++CLPKNLP+FIE+++ +E+ ++HLSD+ LP GVS + + D
Sbjct: 126 -IAEHHVTEIEVTCLPKNLPEFIEVDMAGVEMGQTLHLSDLTLPAGVSSVELAKNDEAHD 184
Query: 181 TAIIPV 186
A++ V
Sbjct: 185 LAVVTV 190
>gi|344337615|ref|ZP_08768549.1| 50S ribosomal protein L25 [Thiocapsa marina 5811]
gi|343802568|gb|EGV20508.1| 50S ribosomal protein L25 [Thiocapsa marina 5811]
Length = 204
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 1/184 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R GT SR LR+ G+VP I+YGG+++P +S+ HN + L+ E F+S +L+
Sbjct: 6 EINAQPRALAGTGASRRLRRTGQVPAIVYGGHQEPEMVSVGHNELLKHLEHEAFYSHVLD 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L+I + V+L++ Q H K V H DF R+ ++K+ + VPLHFIN E S VK+
Sbjct: 66 LKIGERSVKVVLKDLQRHPAKPFVQHVDFLRITQDEKLRMSVPLHFINEERSKGVKMGGQ 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+ N I++L I CLPK+LP+FI +++ +E+ IHLSDI +P GVS+ H+ + D +A
Sbjct: 126 VSHN-ITELEIVCLPKDLPEFIAVDMGDLEIGQIIHLSDIPMPEGVSLAHTPDSDEPVAM 184
Query: 182 AIIP 185
P
Sbjct: 185 IYGP 188
>gi|121634651|ref|YP_974896.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
meningitidis FAM18]
gi|416177719|ref|ZP_11610088.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M6190]
gi|416205426|ref|ZP_11620531.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 961-5945]
gi|416213792|ref|ZP_11622531.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240013]
gi|421540049|ref|ZP_15986202.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 93004]
gi|421554620|ref|ZP_16000561.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 98008]
gi|421557085|ref|ZP_16002994.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 80179]
gi|421558672|ref|ZP_16004550.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 92045]
gi|421565175|ref|ZP_16010959.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM3081]
gi|433492360|ref|ZP_20449454.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM586]
gi|433494433|ref|ZP_20451503.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM762]
gi|433496621|ref|ZP_20453662.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M7089]
gi|433498681|ref|ZP_20455690.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M7124]
gi|433500649|ref|ZP_20457635.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM174]
gi|433502730|ref|ZP_20459695.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM126]
gi|166223696|sp|A1KTB7.1|RL25_NEIMF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120866357|emb|CAM10100.1| hypothetical protein NMC0817 [Neisseria meningitidis FAM18]
gi|254673308|emb|CBA08446.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha275]
gi|325132289|gb|EGC54982.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M6190]
gi|325142126|gb|EGC64551.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 961-5945]
gi|325144239|gb|EGC66545.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240013]
gi|389606032|emb|CCA44945.1| 50S ribosomal protein L25 General stress protein CTC [Neisseria
meningitidis alpha522]
gi|402320333|gb|EJU55824.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 93004]
gi|402332580|gb|EJU67905.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 98008]
gi|402335770|gb|EJU71034.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 80179]
gi|402337415|gb|EJU72663.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 92045]
gi|402345304|gb|EJU80424.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM3081]
gi|432229149|gb|ELK84842.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM586]
gi|432231107|gb|ELK86777.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM762]
gi|432234515|gb|ELK90135.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M7124]
gi|432235321|gb|ELK90937.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M7089]
gi|432235940|gb|ELK91549.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM174]
gi|432240826|gb|ELK96357.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM126]
Length = 190
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|421550421|ref|ZP_15996426.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 69166]
gi|433471221|ref|ZP_20428612.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 68094]
gi|433477356|ref|ZP_20434679.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 70012]
gi|433525886|ref|ZP_20482520.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 69096]
gi|433538748|ref|ZP_20495228.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 70030]
gi|402330636|gb|EJU65983.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 69166]
gi|432209710|gb|ELK65677.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 68094]
gi|432216578|gb|ELK72459.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 70012]
gi|432262077|gb|ELL17322.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 69096]
gi|432274756|gb|ELL29843.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 70030]
Length = 190
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG +++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEDQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|188575471|ref|YP_001912400.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188519923|gb|ACD57868.1| 50S ribosomal protein L25 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 179
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 101/141 (71%)
Query: 29 IYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHA 88
+YGG +PV I +NH I+ A + E F+SSIL+L + G V+ VLLR+ Q H +K+L++H
Sbjct: 1 MYGGELEPVSIQLNHEQIWLAQQNEWFYSSILDLNLNGDVQQVLLRDIQRHPFKQLIMHI 60
Query: 89 DFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLE 148
DFQRV +K+ VPLHFIN E SPA K + ++++ ++++ + CLPK+LP+FIE++L
Sbjct: 61 DFQRVSANQKLSAAVPLHFINEEASPAGKSSEVVVTHELNEVQVVCLPKDLPEFIEVDLG 120
Query: 149 KMEVNTSIHLSDIKLPRGVSV 169
+EV IHLS+IKLP GV +
Sbjct: 121 ALEVGNVIHLSEIKLPAGVEI 141
>gi|225076511|ref|ZP_03719710.1| hypothetical protein NEIFLAOT_01557 [Neisseria flavescens
NRL30031/H210]
gi|224952190|gb|EEG33399.1| hypothetical protein NEIFLAOT_01557 [Neisseria flavescens
NRL30031/H210]
Length = 190
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG +++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGESQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LYLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQVVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + ++ P N+P F+E++ + +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTSVEVAAFPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|218767988|ref|YP_002342500.1| 50S ribosomal protein L25 [Neisseria meningitidis Z2491]
gi|385337823|ref|YP_005891696.1| 50S ribosomal protein L25 [Neisseria meningitidis WUE 2594]
gi|421563091|ref|ZP_16008913.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM2795]
gi|421906662|ref|ZP_16336554.1| 50S ribosomal protein L25 General stress protein CTC [Neisseria
meningitidis alpha704]
gi|433475478|ref|ZP_20432819.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 88050]
gi|433479381|ref|ZP_20436675.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 63041]
gi|433513228|ref|ZP_20470022.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 63049]
gi|433515282|ref|ZP_20472054.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2004090]
gi|433517374|ref|ZP_20474123.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 96023]
gi|433519595|ref|ZP_20476316.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 65014]
gi|433523832|ref|ZP_20480497.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 97020]
gi|433527984|ref|ZP_20484595.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM3652]
gi|433530188|ref|ZP_20486780.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM3642]
gi|433532415|ref|ZP_20488981.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2007056]
gi|433534117|ref|ZP_20490662.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2001212]
gi|433540728|ref|ZP_20497183.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 63006]
gi|71153153|sp|Q9JUX7.1|RL25_NEIMA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|121051996|emb|CAM08305.1| hypothetical protein NMA1094 [Neisseria meningitidis Z2491]
gi|319410237|emb|CBY90577.1| 50S ribosomal protein L25 [Neisseria meningitidis WUE 2594]
gi|393292228|emb|CCI72499.1| 50S ribosomal protein L25 General stress protein CTC [Neisseria
meningitidis alpha704]
gi|402341798|gb|EJU76971.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM2795]
gi|432211296|gb|ELK67251.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 88050]
gi|432217184|gb|ELK73053.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 63041]
gi|432248905|gb|ELL04329.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 63049]
gi|432253870|gb|ELL09206.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2004090]
gi|432254383|gb|ELL09718.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 96023]
gi|432255586|gb|ELL10915.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 65014]
gi|432260731|gb|ELL15989.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 97020]
gi|432266291|gb|ELL21479.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM3652]
gi|432267819|gb|ELL22993.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM3642]
gi|432268360|gb|ELL23531.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2007056]
gi|432272627|gb|ELL27734.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2001212]
gi|432277743|gb|ELL32789.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 63006]
Length = 190
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|15676772|ref|NP_273917.1| 50S ribosomal protein L25 [Neisseria meningitidis MC58]
gi|161869809|ref|YP_001598978.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
meningitidis 053442]
gi|304387809|ref|ZP_07369983.1| 50S ribosomal protein L25 [Neisseria meningitidis ATCC 13091]
gi|385324384|ref|YP_005878823.1| 50S ribosomal protein L25 [Neisseria meningitidis 8013]
gi|385339833|ref|YP_005893705.1| 50S ribosomal protein L25 [Neisseria meningitidis G2136]
gi|385342131|ref|YP_005896002.1| 50S ribosomal protein L25 [Neisseria meningitidis M01-240149]
gi|385851466|ref|YP_005897981.1| 50S ribosomal protein L25 [Neisseria meningitidis M04-240196]
gi|385853435|ref|YP_005899949.1| 50S ribosomal protein L25 [Neisseria meningitidis H44/76]
gi|385855008|ref|YP_005901521.1| 50S ribosomal protein L25 [Neisseria meningitidis M01-240355]
gi|385857021|ref|YP_005903533.1| 50S ribosomal protein L25 [Neisseria meningitidis NZ-05/33]
gi|416188133|ref|ZP_11614602.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M0579]
gi|416192573|ref|ZP_11616679.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis ES14902]
gi|416197299|ref|ZP_11618509.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis CU385]
gi|418290341|ref|ZP_12902503.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM220]
gi|421561037|ref|ZP_16006890.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM2657]
gi|427826374|ref|ZP_18993428.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis H44/76]
gi|433464859|ref|ZP_20422344.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM422]
gi|433467007|ref|ZP_20424464.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 87255]
gi|433469019|ref|ZP_20426448.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 98080]
gi|433488102|ref|ZP_20445270.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M13255]
gi|433490228|ref|ZP_20447357.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM418]
gi|433504510|ref|ZP_20461450.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 9506]
gi|433506896|ref|ZP_20463808.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 9757]
gi|433509041|ref|ZP_20465914.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 12888]
gi|433511141|ref|ZP_20467973.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 4119]
gi|71153154|sp|Q9JZW3.1|RL25_NEIMB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042363|sp|A9M423.1|RL25_NEIM0 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|7226114|gb|AAF41287.1| 50S ribosomal protein L25 [Neisseria meningitidis MC58]
gi|161595362|gb|ABX73022.1| 50S ribosomal protein L25 [Neisseria meningitidis 053442]
gi|254670387|emb|CBA05900.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha153]
gi|261392771|emb|CAX50347.1| 50S ribosomal protein L25 [Neisseria meningitidis 8013]
gi|304338074|gb|EFM04210.1| 50S ribosomal protein L25 [Neisseria meningitidis ATCC 13091]
gi|316985770|gb|EFV64714.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis H44/76]
gi|325135916|gb|EGC58526.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M0579]
gi|325137740|gb|EGC60315.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis ES14902]
gi|325139971|gb|EGC62500.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis CU385]
gi|325198077|gb|ADY93533.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis G2136]
gi|325200439|gb|ADY95894.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis H44/76]
gi|325202337|gb|ADY97791.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240149]
gi|325203949|gb|ADY99402.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M01-240355]
gi|325206289|gb|ADZ01742.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M04-240196]
gi|325207910|gb|ADZ03362.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NZ-05/33]
gi|372201744|gb|EHP15630.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM220]
gi|402339517|gb|EJU74733.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM2657]
gi|432203583|gb|ELK59634.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 87255]
gi|432204346|gb|ELK60391.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM422]
gi|432205412|gb|ELK61442.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 98080]
gi|432224568|gb|ELK80333.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M13255]
gi|432228136|gb|ELK83837.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM418]
gi|432242025|gb|ELK97549.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 9506]
gi|432242685|gb|ELK98203.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 9757]
gi|432247855|gb|ELL03290.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 12888]
gi|432248632|gb|ELL04057.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 4119]
Length = 190
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|421544236|ref|ZP_15990314.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM140]
gi|421546346|ref|ZP_15992395.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM183]
gi|421548610|ref|ZP_15994635.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM2781]
gi|421552640|ref|ZP_15998614.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM576]
gi|433536563|ref|ZP_20493069.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 77221]
gi|402324081|gb|EJU59519.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM183]
gi|402324348|gb|EJU59784.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM140]
gi|402326271|gb|EJU61676.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM2781]
gi|402331272|gb|EJU66613.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM576]
gi|432274036|gb|ELL29130.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 77221]
Length = 190
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|148653903|ref|YP_001280996.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter
sp. PRwf-1]
gi|172048580|sp|A5WHA5.1|RL25_PSYWF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148572987|gb|ABQ95046.1| LSU ribosomal protein L25P [Psychrobacter sp. PRwf-1]
Length = 224
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 10 KKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVE 69
++G SR LRK VP IIYGGN++P I++ N ++ L+ E F S+IL + + G+
Sbjct: 17 QQGKGASRRLRKQNLVPAIIYGGNEEPTAIAIKKNELWKLLENEAFFSNILTINLEGEEH 76
Query: 70 LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISD 129
L ++++ Q H K +HADFQR+ +KI++++PLHF E +P +K I+S +++D
Sbjct: 77 LAVIKDLQRHPSKGFAMHADFQRIVKGQKINMQIPLHFTGREEAPGIKAGG-ILSTLVTD 135
Query: 130 LYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+ I CLP NLP+F+E+++ +E+ S+HL+DIKLP GV + ++P T +
Sbjct: 136 IEIVCLPSNLPEFLEVDVSNLEIGESLHLTDIKLPEGVVIFELDVDEPVDRTVV 189
>gi|240013762|ref|ZP_04720675.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
gonorrhoeae DGI18]
gi|240120830|ref|ZP_04733792.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
gonorrhoeae PID24-1]
gi|293399412|ref|ZP_06643565.1| 50S ribosomal protein L25, Ctc-form [Neisseria gonorrhoeae F62]
gi|291609981|gb|EFF39103.1| 50S ribosomal protein L25, Ctc-form [Neisseria gonorrhoeae F62]
Length = 190
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|261379039|ref|ZP_05983612.1| ribosomal protein L25, Ctc-form [Neisseria cinerea ATCC 14685]
gi|269144490|gb|EEZ70908.1| ribosomal protein L25, Ctc-form [Neisseria cinerea ATCC 14685]
Length = 190
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTTVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|268598621|ref|ZP_06132788.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae MS11]
gi|268603284|ref|ZP_06137451.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID1]
gi|268582752|gb|EEZ47428.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae MS11]
gi|268587415|gb|EEZ52091.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID1]
Length = 190
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTAVEVVALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|268596490|ref|ZP_06130657.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae FA19]
gi|268550278|gb|EEZ45297.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae FA19]
Length = 190
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV + S + + +A
Sbjct: 124 RVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESV-SLKRNENLAV 182
Query: 182 AII 184
A I
Sbjct: 183 ATI 185
>gi|410664410|ref|YP_006916781.1| 50S ribosomal protein L25/general stress protein Ctc [Simiduia
agarivorans SA1 = DSM 21679]
gi|409026767|gb|AFU99051.1| 50S ribosomal protein L25/general stress protein Ctc [Simiduia
agarivorans SA1 = DSM 21679]
Length = 210
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 123/197 (62%), Gaps = 2/197 (1%)
Query: 8 RKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R +G SR LR++ GKVP IIYGG +P I ++H + H L+ E F+S I++L + G
Sbjct: 12 RDVEGKGASRRLRRLAGKVPAIIYGGKSEPQNIQISHKDLVHHLENEAFYSHIISLVVDG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K E V+L++ Q H K ++LHADFQRV +K+ V VPLHFIN + VK I+S++
Sbjct: 72 KAEDVILKDLQRHPAKPVILHADFQRVVKGQKMKVSVPLHFINEASAKGVKQGGGIVSHL 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIATAIIP 185
+S+L ++ LPK+LP+FIE+++ +E+ ++H+S+I LP+ + SV + D + T I P
Sbjct: 132 VSELEVNVLPKDLPEFIEVDVANLELGATLHISEINLPKALESVELAHGHDLPVVTIIKP 191
Query: 186 VNTLESDNNSSIEKEKN 202
D + E E +
Sbjct: 192 RGMGSDDTATEAEGEAD 208
>gi|254804741|ref|YP_003082962.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
meningitidis alpha14]
gi|261400188|ref|ZP_05986313.1| ribosomal protein L25, Ctc-form [Neisseria lactamica ATCC 23970]
gi|296313504|ref|ZP_06863445.1| ribosomal protein L25, Ctc-form [Neisseria polysaccharea ATCC
43768]
gi|313668661|ref|YP_004048945.1| 50s ribosomal protein L25 (general stress protein ctc) [Neisseria
lactamica 020-06]
gi|416162547|ref|ZP_11606776.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis N1568]
gi|416183628|ref|ZP_11612641.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M13399]
gi|418288096|ref|ZP_12900613.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM233]
gi|421537944|ref|ZP_15984125.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 93003]
gi|421542276|ref|ZP_15988386.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM255]
gi|421567306|ref|ZP_16013042.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM3001]
gi|421863106|ref|ZP_16294807.1| 50S ribosomal protein L25 [Neisseria lactamica Y92-1009]
gi|433473275|ref|ZP_20430639.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 97021]
gi|433481825|ref|ZP_20439090.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2006087]
gi|433483809|ref|ZP_20441037.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2002038]
gi|433486010|ref|ZP_20443211.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 97014]
gi|433521698|ref|ZP_20478393.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 61103]
gi|254668283|emb|CBA05191.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha14]
gi|269210188|gb|EEZ76643.1| ribosomal protein L25, Ctc-form [Neisseria lactamica ATCC 23970]
gi|296839947|gb|EFH23885.1| ribosomal protein L25, Ctc-form [Neisseria polysaccharea ATCC
43768]
gi|309379435|emb|CBX22002.1| 50S ribosomal protein L25 [Neisseria lactamica Y92-1009]
gi|313006123|emb|CBN87584.1| 50s ribosomal protein L25 (general stress protein ctc) [Neisseria
lactamica 020-06]
gi|325127982|gb|EGC50881.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis N1568]
gi|325133985|gb|EGC56640.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis M13399]
gi|372202622|gb|EHP16409.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM233]
gi|402317786|gb|EJU53316.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 93003]
gi|402318212|gb|EJU53737.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM255]
gi|402344317|gb|EJU79458.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis NM3001]
gi|432210876|gb|ELK66832.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 97021]
gi|432217656|gb|ELK73524.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2006087]
gi|432221512|gb|ELK77322.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 2002038]
gi|432223056|gb|ELK78838.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 97014]
gi|432260471|gb|ELL15730.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis 61103]
Length = 190
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTTVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|59800883|ref|YP_207595.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae FA 1090]
gi|194098189|ref|YP_002001237.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae NCCP11945]
gi|240016200|ref|ZP_04722740.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
gonorrhoeae FA6140]
gi|254493356|ref|ZP_05106527.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 1291]
gi|268594494|ref|ZP_06128661.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 35/02]
gi|268600974|ref|ZP_06135141.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID18]
gi|268681764|ref|ZP_06148626.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID332]
gi|268683986|ref|ZP_06150848.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-92-679]
gi|291044213|ref|ZP_06569922.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
gonorrhoeae DGI2]
gi|385335368|ref|YP_005889315.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
gonorrhoeae TCDC-NG08107]
gi|68053023|sp|Q5F9F4.1|RL25_NEIG1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736341|sp|B4RKF2.1|RL25_NEIG2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|59717778|gb|AAW89183.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|193933479|gb|ACF29303.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae NCCP11945]
gi|226512396|gb|EEH61741.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 1291]
gi|268547883|gb|EEZ43301.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae 35/02]
gi|268585105|gb|EEZ49781.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID18]
gi|268622048|gb|EEZ54448.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae PID332]
gi|268624270|gb|EEZ56670.1| 50S ribosomal protein L25 [Neisseria gonorrhoeae SK-92-679]
gi|291011107|gb|EFE03103.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
gonorrhoeae DGI2]
gi|317163911|gb|ADV07452.1| 50S ribosomal protein L25/general stress protein Ctc [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 190
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|385328196|ref|YP_005882499.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha710]
gi|416172147|ref|ZP_11608700.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis OX99.30304]
gi|308389048|gb|ADO31368.1| 50S ribosomal protein L25 [Neisseria meningitidis alpha710]
gi|325130024|gb|EGC52817.1| ribosomal protein L25, Ctc-form [Neisseria meningitidis OX99.30304]
Length = 190
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 120/175 (68%), Gaps = 1/175 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++ L + G+
Sbjct: 10 REAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIKLSLNGE 69
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL +S +
Sbjct: 70 TKDVIVRDFQMHPFRREVQHIDFQAVKADQLVRIRVPLHIVNAENSQAVKLQGGRVSLLN 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIAT 181
+ + + LP N+P F++++ ++ +HLSDIKLP GV SV E+ +AT
Sbjct: 130 TTVEVLALPANIPAFLDLDCAEVVAGDILHLSDIKLPEGVESVSLKRNENLAVAT 184
>gi|386288630|ref|ZP_10065770.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium BDW918]
gi|385278185|gb|EIF42157.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium BDW918]
Length = 210
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 117/193 (60%), Gaps = 4/193 (2%)
Query: 8 RKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ G++P I+YGG K P +++ H + L E F++SIL L++ G
Sbjct: 12 RADVGKGASRRLRRLEGEIPAIVYGGEKAPQMLNLIHKDLIRLLNDEAFYTSILTLDVDG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E V+L++ Q H K VLHADF RV+ + I + VPLHF+N +I VKL I++
Sbjct: 72 QKESVVLKDLQRHPAKLRVLHADFLRVNADTPITLHVPLHFLNEDICVGVKLQGGNITHA 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS---VIHSTEEDPTIATAI 183
+D+ + CLPK+LP+FIE+++ K+E T++H+SD+ LP GVS + + D IAT
Sbjct: 132 ATDIEVQCLPKDLPEFIEVDMAKIETGTTLHISDLVLPAGVSSTALALGEDHDQAIATVH 191
Query: 184 IPVNTLESDNNSS 196
P D + +
Sbjct: 192 APRGASSDDEDEA 204
>gi|349609840|ref|ZP_08889210.1| 50S ribosomal protein L25 [Neisseria sp. GT4A_CT1]
gi|348611111|gb|EGY60781.1| 50S ribosomal protein L25 [Neisseria sp. GT4A_CT1]
Length = 190
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAITVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P +++++ K+ +HLSDI+LP GV SV E+ +A
Sbjct: 124 RVSLLNTTVEVVALPANIPAYLDLDCTKVVAGDILHLSDIQLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|255065136|ref|ZP_05316991.1| ribosomal protein L25, Ctc-form [Neisseria sicca ATCC 29256]
gi|340362505|ref|ZP_08684886.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria
macacae ATCC 33926]
gi|419795830|ref|ZP_14321410.1| ribosomal protein L25, Ctc-form [Neisseria sicca VK64]
gi|255050557|gb|EET46021.1| ribosomal protein L25, Ctc-form [Neisseria sicca ATCC 29256]
gi|339887358|gb|EGQ76924.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria
macacae ATCC 33926]
gi|385700043|gb|EIG30300.1| ribosomal protein L25, Ctc-form [Neisseria sicca VK64]
Length = 190
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P +++++ K+ +HLSDI+LP GV SV E+ +A
Sbjct: 124 RVSLLNTTVEVVALPANIPAYLDLDCTKVVAGDILHLSDIQLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|298368586|ref|ZP_06979904.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282589|gb|EFI24076.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str.
F0314]
Length = 190
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+++GT SR LR+ G++P I+YG ++ P+ IS++H I++AL+KE+FH++++
Sbjct: 4 EIQAAIREQQGTGASRRLRREGQIPAILYGEDQKPISISVDHKTIFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + GK V++R+FQ+H +++ V H DFQ V + + ++VPLH +N+E S AVKL
Sbjct: 64 LALNGKTYDVIVRDFQMHPFRREVQHIDFQVVKANQLLRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + I LP N+P F++++ +E +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTSVEILALPSNIPAFLDLDCASVEAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|256821850|ref|YP_003145813.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Kangiella
koreensis DSM 16069]
gi|256795389|gb|ACV26045.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kangiella
koreensis DSM 16069]
Length = 229
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 118/181 (65%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ ++P I+YGG ++P IS+NHN I + L +E +SSI+ L+I G
Sbjct: 11 RSDMGKGASRRLRREADQIPAIVYGGKEEPKSISLNHNQIINMLDEEAVYSSIIKLDIAG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
KVE V++++ Q HAYK VLH D +R+ + ++ V LHFIN + +P VK I+S+
Sbjct: 71 KVEEVVIKDIQRHAYKPKVLHMDLKRIVRGEIMNANVALHFINEKSAPGVKAGG-IVSHQ 129
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV--SVIHSTEEDPTIATAII 184
++ + ++C P+NLP++IE++L +E+ +IHLSD+KLP GV + + E D ++A +
Sbjct: 130 VTSVEVACRPRNLPEYIEVDLGALEIGETIHLSDLKLPEGVELTALQGEEHDLSVANIVR 189
Query: 185 P 185
P
Sbjct: 190 P 190
>gi|241760166|ref|ZP_04758264.1| ribosomal protein L25, Ctc-form [Neisseria flavescens SK114]
gi|241319620|gb|EER56050.1| ribosomal protein L25, Ctc-form [Neisseria flavescens SK114]
Length = 190
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++P I+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPSILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + G+ + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAENSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P F+E++ + +HLSDIKLP GV SV E+ +A
Sbjct: 124 RVSLLNTSVEVVALPANIPAFLELDCASVVAGDILHLSDIKLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|288942090|ref|YP_003444330.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Allochromatium vinosum DSM 180]
gi|288897462|gb|ADC63298.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Allochromatium vinosum DSM 180]
Length = 201
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 114/172 (66%), Gaps = 1/172 (0%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R GT SR LR+ G VP I+YG ++DP +S++HN + L+ E F+S +L+L++
Sbjct: 9 AQPRTGTGTGASRRLRRTGLVPAIVYGAHQDPEMVSVSHNELLKHLEHEAFYSHVLDLKV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
V V+L++ Q H K +LH DF RV ++K+ + VPLHF+N + VKL ++S
Sbjct: 69 GDDVTKVVLKDMQRHPAKPFILHVDFMRVSQDEKLKMVVPLHFLNEDTCKGVKLGG-VVS 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ I+++ I CLP++LP+FI +++ +ME+ + +HLS++ LP GV++ H+ + D
Sbjct: 128 HTITEVEIVCLPQDLPEFIGVDMAEMEIGSIVHLSELALPEGVALAHAPDPD 179
>gi|220933713|ref|YP_002512612.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254801065|sp|B8GLA7.1|RL25_THISH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|219995023|gb|ACL71625.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 212
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 112/184 (60%), Gaps = 3/184 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R +G SR LR+ GKVP I+YG KDP I+++HN + L+ E F+S IL++++
Sbjct: 9 AEPRADQGKGASRRLRRAGKVPAILYGEGKDPQPITLDHNAVMLNLEHEAFYSHILSVKL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK E +LR+ Q H K ++LH D RV + I V VPLHF N E VK ++S
Sbjct: 69 GGKAEKAILRDVQRHPCKPIILHLDLLRVSEDHAIRVHVPLHFTNEESCVGVKTGGGMVS 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIAT 181
+ + ++ + CLPK+LP+FIE+++ + V S+HLS I LP GVS++ H + D + +
Sbjct: 129 HQMVEVEVECLPKHLPEFIEVDVASLNVGDSLHLSQISLPEGVSIVALSHGPDHDLPVVS 188
Query: 182 AIIP 185
+ P
Sbjct: 189 ILKP 192
>gi|332140914|ref|YP_004426652.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii str. 'Deep ecotype']
gi|410861171|ref|YP_006976405.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii AltDE1]
gi|226736275|sp|B4RSW4.1|RL25_ALTMD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|327550936|gb|AEA97654.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii str. 'Deep ecotype']
gi|410818433|gb|AFV85050.1| 50S ribosomal protein L25/general stress protein Ctc [Alteromonas
macleodii AltDE1]
Length = 210
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR+ K+PGIIYGG + PV I+++HN + ++ E F+S +L L + GK
Sbjct: 13 RTDLGKGASRRLRREDKLPGIIYGGEEAPVSITLDHNKVNNSADFEAFYSHVLTLNLDGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL+++ Q H YK ++H DFQRV + +H VPLHF+N E S AVK I + +
Sbjct: 73 PVEVLVKDMQRHPYKPKIMHIDFQRVIAGEDVHTNVPLHFVNEEKSAAVKAGG-IAEHHV 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+++ ++C PK+LP+FIE+++ +E+ ++HLSD+ LP GVS + + D A++ V
Sbjct: 132 TEIEVTCQPKDLPEFIEVDMAAVEMGQTVHLSDLTLPAGVSSVELAKNDEAHDLAVVTV 190
>gi|431932402|ref|YP_007245448.1| 50S ribosomal protein L25 [Thioflavicoccus mobilis 8321]
gi|431830705|gb|AGA91818.1| ribosomal protein L25, Ctc-form [Thioflavicoccus mobilis 8321]
Length = 206
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+I R G SR LR+ G+VP I+YGG+++P IS++H+ + L E F+S +L+L
Sbjct: 7 VIGQPRHDTGKGASRRLRRTGQVPAIVYGGHQEPEMISVSHSELLRHLNNEAFYSHVLDL 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ + V+L++ Q H K +LH DFQRV +KI + VPLHF N + S VKL
Sbjct: 67 QVGERNTKVVLKDMQRHPAKPFILHVDFQRVSAGEKIRMVVPLHFENEQQSKGVKLGGR- 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+S+ ++++ ISCLPK+LP+FI I++ +M++ IHLS+I LP GV + H+ + D
Sbjct: 126 VSHSVTEVEISCLPKDLPEFIAIDMTEMDIGDVIHLSEIPLPAGVELAHAPDPD 179
>gi|429744178|ref|ZP_19277686.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 020 str.
F0370]
gi|429163507|gb|EKY05724.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 020 str.
F0370]
Length = 212
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 120/177 (67%), Gaps = 1/177 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ GT SR LR+ G+VP ++YG N++ V I+++H +++AL+KE+FH+S++ L + GK
Sbjct: 32 REAHGTGASRRLRREGQVPAVLYGDNQEAVAIAVDHKTMFYALEKESFHTSLIKLAVDGK 91
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V++R+FQ+H +++ VLH DFQ VD K + +++P+ IN+E S AVKL S +S +
Sbjct: 92 TQDVIVRDFQIHPFRRQVLHIDFQAVDVNKPLKMRLPITVINAEKSKAVKLQSGRVSLLA 151
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
S + + PKN+P ++E++ ++ +HLSDIK P GV+ + + + D +A A +
Sbjct: 152 SSVEVIVDPKNIPSYLELDCGEVVAGDILHLSDIKYPEGVTSV-ALKRDSNLAVATV 207
>gi|261855769|ref|YP_003263052.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Halothiobacillus neapolitanus c2]
gi|261836238|gb|ACX96005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Halothiobacillus neapolitanus c2]
Length = 204
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 118/197 (59%), Gaps = 2/197 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R +G SR LR+ G++P I+YGG++ P +++ HN I L+ E F+S +L L I
Sbjct: 10 AARRDDQGKGASRRLRREGRIPAIVYGGDEAPQSVTILHNEILKHLEHEAFYSHVLELNI 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V+LR+ H YK L++HADFQRV + + V VPLHF+N E S K I++
Sbjct: 70 DGKTSKVILRDLHRHPYKPLIMHADFQRVSANQSLRVTVPLHFLNKETSVGAKAGG-IVN 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
++S++ + C LP+FIE++++ +++ SIHLS IK+P GV IH+ ++
Sbjct: 129 VILSEIEVDCTANKLPEFIEVDMKDLDIGGSIHLSQIKMPAGVR-IHALMLGEDHDVGVV 187
Query: 185 PVNTLESDNNSSIEKEK 201
++ + D ++ E E+
Sbjct: 188 AIHAPKVDKSAEAESEE 204
>gi|90408736|ref|ZP_01216883.1| Ribosomal protein L25 [Psychromonas sp. CNPT3]
gi|90310153|gb|EAS38291.1| Ribosomal protein L25 [Psychromonas sp. CNPT3]
Length = 205
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 115/184 (62%), Gaps = 4/184 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K++A R G SR LR VPGI+YG KDP+ ++ + E F+SSIL
Sbjct: 3 IKLVAQTRTDLGKGASRRLRHAELVPGIVYGIGKDPISLTFEQKELRKIESVEAFYSSIL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI G VE V+L+ Q HA+K+ + H D RVD K+ +PLHFIN++ + A+K
Sbjct: 63 DLEIDGTVEKVVLKALQRHAFKEQIQHLDLLRVDASHKLQTTIPLHFINADTNEALKAGG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG---VSVIHSTEEDP 177
+++ +++++ ISCLP +LP FI +L +E+ TS+H+SD+ LP+G V +I TE D
Sbjct: 123 -VLTQIMNEVSISCLPTDLPAFITADLANLEMGTSLHISDLVLPKGVESVELIKGTEYDR 181
Query: 178 TIAT 181
+IA+
Sbjct: 182 SIAS 185
>gi|336450045|ref|ZP_08620502.1| ribosomal protein L25, Ctc-form [Idiomarina sp. A28L]
gi|336283202|gb|EGN76409.1| ribosomal protein L25, Ctc-form [Idiomarina sp. A28L]
Length = 215
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 115/188 (61%), Gaps = 6/188 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R KG SR LR G VP I+YGGN D V ++++H+ I +A E F+S IL L I GK
Sbjct: 13 RTDKGKGASRRLRLEGNVPAILYGGNADAVSLTLDHDKIINAADHEGFYSHILTLHIDGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H +K + H DFQRV ++++H +P+HFI E AVK ++ + +
Sbjct: 73 KHQAILKDVQRHPFKPKITHLDFQRVSAKEELHTNLPIHFIGEE---AVKKAGGVVVHQM 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST---EEDPTIATAII 184
+++ ISCLPK+LP++IE+N+E +E+ +IHL+ I P+GV+ I T + DP + T
Sbjct: 130 NEIEISCLPKDLPEYIEVNVEGLEIGDNIHLTQITAPKGVTFIELTRGEDHDPVLVTVSK 189
Query: 185 PVNTLESD 192
P SD
Sbjct: 190 PKTETVSD 197
>gi|348029562|ref|YP_004872248.1| large subunit 50S ribosomal protein L25 [Glaciecola nitratireducens
FR1064]
gi|347946905|gb|AEP30255.1| large subunit ribosomal protein L25 [Glaciecola nitratireducens
FR1064]
Length = 215
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 8/211 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
K+ A R G SR LR KVP I+YGG++ PV I+++HN + A E F+S +L
Sbjct: 6 FKLDATIRTDLGKGASRRLRLQDKVPAIVYGGDEAPVSITLDHNKVNQAQDFEAFYSHVL 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ I GK L+++ Q H YK V H DFQRV + + VP+HFIN S A+K N
Sbjct: 66 TINIEGKKVEALVKDMQRHPYKPKVTHIDFQRVIAGQSLTTNVPIHFINEAESDAIKFNG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH---STEED- 176
+ ++D+ I+CLPKNLP++IE++L+ +E+ +IHLSD+ P+GV + E D
Sbjct: 126 GHAEHHMNDIEITCLPKNLPEYIEVDLKNIEIGQTIHLSDVTFPKGVESVELGKGEEHDL 185
Query: 177 --PTIATAIIPVNTLESDNNSSIEKEKNNNS 205
T+ TA P ++E D + + E E + +
Sbjct: 186 AVVTVKTAKGP--SVEEDADDAAEGEADTTA 214
>gi|386815306|ref|ZP_10102524.1| LSU ribosomal protein L25P [Thiothrix nivea DSM 5205]
gi|386419882|gb|EIJ33717.1| LSU ribosomal protein L25P [Thiothrix nivea DSM 5205]
Length = 190
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 118/195 (60%), Gaps = 15/195 (7%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A R +G SR LRK VP +IYG +D I++ HN + L++E F+S I+ +
Sbjct: 7 LTAQARDLQGKGASRRLRKENLVPAVIYGAGQDAKSITLRHNEMVRNLQEEAFYSQIITV 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+ E +LR+ Q H K +V+HAD QR+ +++I + V LHFIN ++S VK
Sbjct: 67 DFGDHQEQTILRDLQRHPSKPIVMHADLQRISEDQEIRIHVSLHFINEDVSKGVKEQGAS 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
IS+V+S++ +SCLPKNLP++IE+++ +E +HLSD+KLP GVS+ PT+A
Sbjct: 127 ISHVVSEVEVSCLPKNLPEYIEVDMISIEKGQILHLSDLKLPEGVSL-------PTLA-- 177
Query: 183 IIPVNTLESDNNSSI 197
L D+NS+I
Sbjct: 178 ------LGEDHNSAI 186
>gi|410613078|ref|ZP_11324146.1| large subunit ribosomal protein L25 [Glaciecola psychrophila 170]
gi|410167220|dbj|GAC38035.1| large subunit ribosomal protein L25 [Glaciecola psychrophila 170]
Length = 210
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 109/163 (66%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR GKVP ++YG NK+ + +++ HN ++ A E F+S +L L I +
Sbjct: 13 RTDLGKGASRRLRHAGKVPAVLYGANKEAISLTLIHNKLFQAQSFEAFYSHVLTLNIGEE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL+++ Q HA+K +V+H DF R+D +K + VPLHF+N E + ++KLN + +
Sbjct: 73 KVEVLVKDMQRHAFKPIVMHLDFLRIDAKKALQTNVPLHFLNEEKAESIKLNGGHAEHHM 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
D+ +SCLP +LP+FIE++L +E++ +IHLSD+ LP+GVS++
Sbjct: 133 LDVEVSCLPADLPEFIEVDLLNVELDQTIHLSDLVLPKGVSLV 175
>gi|387126393|ref|YP_006294998.1| 50S ribosomal protein L25 [Methylophaga sp. JAM1]
gi|386273455|gb|AFI83353.1| LSU ribosomal protein L25p [Methylophaga sp. JAM1]
Length = 224
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 115/166 (69%), Gaps = 2/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R +G SR LR GKVP ++YG K+PV IS+NHN + L +E F++ IL L I
Sbjct: 9 AEARTDQGKGASRRLRHSGKVPAVVYGAEKEPVSISINHNQLIRHLAEEAFYAHILTLVI 68
Query: 65 YGKVELVLLRNFQLH-AYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
GK V+L++ Q H A ++HADF R+D++ + + +PLHF+N E + VK +I
Sbjct: 69 DGKKNQVVLKDLQRHPANDNKIIHADFLRIDSKHAMTMTIPLHFVNEEKAVGVKAGG-LI 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
S++++++ ISCLPK+LP++IE+++ K+ ++ +IHLS++KLP+GV++
Sbjct: 128 SHLMTEVEISCLPKDLPEYIEVDVAKLAMDEAIHLSELKLPKGVTL 173
>gi|392548993|ref|ZP_10296130.1| 50S ribosomal protein L25 [Pseudoalteromonas rubra ATCC 29570]
Length = 202
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 3/160 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ GT SR LR+ KVP I+YG KD V +++ HN + + E F++ IL L I G+
Sbjct: 11 RETLGTGASRRLRRADKVPAILYGAGKDAVSLTLEHNKVIQMQEDEGFYTHILTLNIGGE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H YK V H DFQRVD +K+H KVP+HFIN E A I++ +
Sbjct: 71 SVEAILKDIQRHPYKPKVTHLDFQRVDASQKLHTKVPVHFINEE---AATKGGNTIAHHV 127
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+++ I+CLP LP+F+E+++ +EV ++HLSDI LP GV
Sbjct: 128 TEIEITCLPAQLPEFVEVDVAAIEVGATVHLSDIALPAGV 167
>gi|77164043|ref|YP_342568.1| 50S ribosomal protein L25 [Nitrosococcus oceani ATCC 19707]
gi|254435005|ref|ZP_05048512.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27]
gi|109893372|sp|Q3JDQ8.1|RL25_NITOC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|76882357|gb|ABA57038.1| LSU ribosomal protein L25P [Nitrosococcus oceani ATCC 19707]
gi|207088116|gb|EDZ65388.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27]
Length = 214
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R ++G SR LR+ GKVP ++YG K+P+ + +HN+++ L + F+S IL + GK
Sbjct: 12 RVEQGKGASRRLRRAGKVPAVLYGAAKEPISLLFDHNLLFRHLSHDAFYSHILTIHANGK 71
Query: 68 VELVLLRNFQLHAYK-KLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V+L+ Q VLH D QRV + +K+ +KVPLHFI E++P VK ++ +
Sbjct: 72 AERVVLKALQRDPVNPNKVLHLDLQRVSSTQKLTIKVPLHFIGDEMAPGVKQEGGTVARL 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++D+ ISCL K+LP++IE++L + V ++HLSD+KLP GV +
Sbjct: 132 LNDIEISCLAKDLPEYIEVDLADLGVGETVHLSDLKLPGGVEI 174
>gi|392551834|ref|ZP_10298971.1| 50S ribosomal protein L25 [Pseudoalteromonas spongiae
UST010723-006]
Length = 204
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 102/160 (63%), Gaps = 3/160 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R GT SR LR+ KVP ++YG K+ V +++ HN + A + E F+S IL L I G+
Sbjct: 13 RSDLGTGASRRLRRADKVPAVLYGAEKEAVSLTLAHNKVIKAQEDEGFYSHILTLNIGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H +K V+H DFQRVD KIH KVP+HF+N E A +++++
Sbjct: 73 KVEAILKDIQRHPFKPKVMHLDFQRVDANHKIHTKVPVHFLNEE---AATKGGNTVAHLV 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+++ I+CLP LP+FIE+++ +EV ++HLSDI LP GV
Sbjct: 130 TEIEITCLPAQLPEFIEVDVAALEVGATVHLSDIALPAGV 169
>gi|384082302|ref|ZP_09993477.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium HIMB30]
Length = 210
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++ A R++ G SR LR++ G VP I+YGG P I + H + AL++E+F+SS++
Sbjct: 5 RLSAQSREEAGKGSSRRLRRLEGLVPAIVYGGKNKPKSIQLAHKDLKRALEEESFYSSVI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LEI GK E V+L+ Q H K LVLHADFQR + V VP+HF+N VK+
Sbjct: 65 TLEIDGKDEPVILKALQRHPAKPLVLHADFQRASAGTVLKVNVPVHFLNETSCKGVKMQG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+I + ++ +SC PK+LP+FIE++L ++E++ IHLSD+K P+GV+ +
Sbjct: 125 GVIHHDAVEIEVSCSPKDLPEFIEVDLAEVELDQVIHLSDLKAPKGVTFV 174
>gi|410634150|ref|ZP_11344788.1| large subunit ribosomal protein L25 [Glaciecola arctica BSs20135]
gi|410146311|dbj|GAC21655.1| large subunit ribosomal protein L25 [Glaciecola arctica BSs20135]
Length = 217
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 114/179 (63%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR GKVP ++YG K+ V +++NHN ++ A E F+S +L L I +
Sbjct: 13 RTDLGKGASRRLRHAGKVPAVLYGAGKEAVSLTLNHNKLFQAQGFEAFYSHVLTLNIGKE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL+++ Q HA+K +V+H DF RVD + + VPLHFIN E + ++KLN + +
Sbjct: 73 KVEVLVKDMQRHAFKPVVMHLDFLRVDAKVALQTNVPLHFINEEKAESIKLNGGHAEHHM 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
D+ +SCLP +LP++IE++L +E++ +IHL+D+ LP+GVS++ + D A++ V
Sbjct: 133 VDVEVSCLPGDLPEYIEVDLINIELDQTIHLTDLVLPKGVSLVELNKGDDNHDLAVVTV 191
>gi|399911606|ref|ZP_10779920.1| 50S ribosomal protein L25 [Halomonas sp. KM-1]
Length = 212
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 112/182 (61%), Gaps = 4/182 (2%)
Query: 8 RKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ +VP I+YGG+K P IS+ Y A++ ETF SS+LNL I G
Sbjct: 11 RNDLGKGASRRLRRANLEVPAIVYGGDKAPQPISLEKAPFYKAIEDETFFSSVLNLVIDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K E V++R+ Q H YK LV HADF RVD I + VPLH + E S +K + +
Sbjct: 71 KKEQVVVRDLQRHPYKPLVTHADFMRVDATHAITINVPLHVVGEEKSKGIKDQGGELHIL 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIATAI 183
+++ ISCLPK+LP F+E+++ +E+ T++HLSD++LP GV+++ H + D + +
Sbjct: 131 SNEIQISCLPKDLPDFLEVDITNVELGTTLHLSDLELPAGVTLVELSHGADHDNAVLSIT 190
Query: 184 IP 185
P
Sbjct: 191 KP 192
>gi|409203091|ref|ZP_11231294.1| 50S ribosomal protein L25 [Pseudoalteromonas flavipulchra JG1]
Length = 202
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 106/166 (63%), Gaps = 3/166 (1%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ A R GT SR LR+ KVP I+YG KD V ++++HN + A + E F++ IL
Sbjct: 5 KLDAEVRSDLGTGASRRLRRADKVPAILYGAGKDAVSLTLDHNKVLKAQEDEGFYTHILT 64
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L I G+ +L++ Q H YK + H DFQRVD +K+H KVP+HFIN E A K +
Sbjct: 65 LNIGGESVEAILKDMQRHPYKPKITHLDFQRVDASQKLHTKVPVHFINEE--KATKGGNT 122
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
I+ ++++ I+CLP LP+FIE+++ + V ++HLSDIKLP GV
Sbjct: 123 IVHQ-LTEIEITCLPARLPEFIEVDVATLAVGETLHLSDIKLPAGV 167
>gi|392541028|ref|ZP_10288165.1| 50S ribosomal protein L25 [Pseudoalteromonas piscicida JCM 20779]
Length = 202
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ A R GT SR LR+ KVP I+YG KD V ++ +HN + A + E F++ IL
Sbjct: 5 KLDAEVRSDLGTGASRRLRRADKVPAILYGAGKDAVSLTFDHNKVLKAQEDEGFYTHILT 64
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L I G+ +L++ Q H YK + H DFQRVD +K+H KVP+HFIN E A K +
Sbjct: 65 LNIGGESVEAILKDMQRHPYKPKITHLDFQRVDASQKLHTKVPVHFINEE--KATKGGNT 122
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
I+ ++++ I+CLP LP+FIE+++ + V ++HLSDIKLP GV
Sbjct: 123 IVHQ-LTEIEITCLPARLPEFIEVDVATLAVGATLHLSDIKLPAGV 167
>gi|85713257|ref|ZP_01044282.1| Ribosomal protein L25 [Idiomarina baltica OS145]
gi|85692926|gb|EAQ30899.1| Ribosomal protein L25 [Idiomarina baltica OS145]
Length = 220
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R KG SR LR KVP I+YGG +P+ + ++HN + + E F+S IL L
Sbjct: 8 IKATVRTDKGKGASRRLRHADKVPAILYGGKDEPIALELDHNKVNNMADYEAFYSHILTL 67
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
EI GK +L++ Q H YK + H DFQRV+ K+H VPLHF+N E + VK +
Sbjct: 68 EIDGKKHQAILKDMQRHPYKPKLTHLDFQRVEKGHKLHTHVPLHFLNEETAKGVKDEGGV 127
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST---EEDPTI 179
+ + ++D+ I LPK+LP+++E+++ + V +IHL+D+ LP GV ++ T + D +
Sbjct: 128 VVHHVNDVEIMVLPKDLPEYLEVDIANLSVGDTIHLTDLNLPEGVELVELTKGEDHDQAV 187
Query: 180 ATAIIP-VNTLESDNNSSIEKE 200
+ P V ES++ + E
Sbjct: 188 VSITAPRVEKEESEDEAPAADE 209
>gi|407791828|ref|ZP_11138906.1| 50S ribosomal protein L25 [Gallaecimonas xiamenensis 3-C-1]
gi|407198881|gb|EKE68907.1| 50S ribosomal protein L25 [Gallaecimonas xiamenensis 3-C-1]
Length = 201
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR+ KVP I+YG +K+PV I+++HN + A +E F++ IL L I G
Sbjct: 10 RTDLGKGASRRLRREEKVPAIVYGADKEPVSIALDHNKVIEAQAEEGFYTHILTLNIAGA 69
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL+++ Q H YK V H DF RVD K+ KVPLHF+ E A +++ +
Sbjct: 70 KTEVLVKDMQRHPYKPKVTHIDFLRVDASHKVVTKVPLHFVGEE---AATKKGGVVARLA 126
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
S++ I+CLPK+LP+FIE+N+ +EV ++HL+D+ +P+GV+++
Sbjct: 127 SEVEITCLPKDLPEFIEVNVAGLEVGATLHLTDLAVPKGVALV 169
>gi|387131035|ref|YP_006293925.1| 50S ribosomal protein L25 [Methylophaga sp. JAM7]
gi|386272324|gb|AFJ03238.1| LSU ribosomal protein L25p [Methylophaga sp. JAM7]
Length = 228
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 114/170 (67%), Gaps = 2/170 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++ A R +G SR LR+ GKVP ++YG K PV IS++HN L +E F++ IL
Sbjct: 5 FEVHAEARTDEGKGASRRLRRAGKVPAVVYGTEKKPVSISLDHNQFIRHLAEEAFYAHIL 64
Query: 61 NLEIYGKVELVLLRNFQLH-AYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
NL I GK V+L++ Q H A ++HADF RVD + ++ + V LHF+N + +P VK
Sbjct: 65 NLVIDGKKNQVVLKDLQRHPANDNKIIHADFLRVDAKHEMTMTVQLHFVNEDKAPGVKAG 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+S++I+++ I+CLPK+LP++IE+++ K+E++ IHLS++ LP GVS+
Sbjct: 125 GQ-VSHLITEVEIACLPKDLPEYIEVDVAKLEMDEYIHLSELDLPSGVSL 173
>gi|88861339|ref|ZP_01135969.1| 50S ribosomal protein L25 [Pseudoalteromonas tunicata D2]
gi|88816605|gb|EAR26430.1| 50S ribosomal protein L25 [Pseudoalteromonas tunicata D2]
Length = 200
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 105/160 (65%), Gaps = 3/160 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ GKVP I+YG +K+ V + + H + A + E F++ IL L + G+
Sbjct: 13 RVELGTGASRRLRREGKVPAILYGADKEAVSLVLAHKEVIKAQEDEGFYTHILTLNLNGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+L++ Q H +K +V H DFQRVD KIH KVP HFIN E A KL + + +V
Sbjct: 73 KVEVILKDMQRHPFKPVVTHLDFQRVDASHKIHTKVPFHFINEE--KATKLGATVAHHV- 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+++ I+CLP NLP+FIE+++ +EV ++HLSD+ LP GV
Sbjct: 130 TEVEITCLPANLPEFIEVDVATIEVGATLHLSDVALPAGV 169
>gi|335424592|ref|ZP_08553600.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinisphaera
shabanensis E1L3A]
gi|334888930|gb|EGM27225.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinisphaera
shabanensis E1L3A]
Length = 242
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R KG + +R LR+ G+VP IIYGGN +PV +++ HN + H L E F S I+ + +
Sbjct: 8 AEKRTAKGRAENRRLRREGRVPAIIYGGNGEPVMLTLEHNDLDHHLDNEAFFSHIIKINV 67
Query: 65 YGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G E V+LR+ Q H K + HADF R+ + + + VPLHF+ E P V ++
Sbjct: 68 AGGGSEEVVLRDLQRHPAKPFIEHADFLRIVAGEALRMSVPLHFVGEEECPGVADEDGVV 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH--STEEDPTIAT 181
+ ++D+ I CLP+NLP++IE++ K+ ++ S+HLS++ LP GV ++ EED T T
Sbjct: 128 QHNMNDIEIECLPRNLPEYIEVDCSKLHLHDSVHLSELVLPEGVEIVELMGDEEDQTDRT 187
Query: 182 AI 183
+
Sbjct: 188 VV 189
>gi|119944671|ref|YP_942351.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychromonas
ingrahamii 37]
gi|226736354|sp|A1STD7.1|RL25_PSYIN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|119863275|gb|ABM02752.1| LSU ribosomal protein L25P [Psychromonas ingrahamii 37]
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ A R G SR LR VP I+YG +K+ V ++ H I A E F+SS+L
Sbjct: 3 IKLTATTRTDLGKGASRRLRHADLVPAIVYGADKEAVSLTFTHKDIIKAEGIEAFYSSVL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LEI G E V+L++ Q HA+K + H D RVD + K+H VPLHFIN +S A+K N
Sbjct: 63 DLEIDGVSEQVVLKDLQRHAFKARIQHLDLLRVDAKHKLHTTVPLHFINEGLSEAIK-NG 121
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
I+ I+++ + CLPK+LP FIE+++ ME+ ++HLS+I LP GV
Sbjct: 122 GIVYRTINEVEVLCLPKDLPSFIEVDISTMEIGDTLHLSNITLPAGV 168
>gi|114319446|ref|YP_741129.1| 50S ribosomal protein L25/general stress protein Ctc
[Alkalilimnicola ehrlichii MLHE-1]
gi|122312594|sp|Q0ABZ8.1|RL25_ALHEH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|114225840|gb|ABI55639.1| LSU ribosomal protein L25P [Alkalilimnicola ehrlichii MLHE-1]
Length = 214
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 114/169 (67%), Gaps = 1/169 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MK+ A R + G SR LR+ +VP I+YGG+++P I++N + +++E F+S IL
Sbjct: 6 MKLDAELRTETGRGASRRLRRAKRVPAIMYGGHQEPQAITLNLLQLDRLMQEEAFYSQIL 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ + GK E V++++ Q H +K LV H D QRV +K+H VP+HF+N + +P +K
Sbjct: 66 TVNLDGKSEQVIVKDLQRHPFKPLVEHVDLQRVVAGEKVHTSVPVHFVNEDKAPGIKAGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
II + ++++ I+CLPK+LP+++E+++ +E+ ++IHLSD+ LP GV +
Sbjct: 126 -IIHHDLNEIEIACLPKDLPEYLEVDVSALELGSAIHLSDVPLPAGVEI 173
>gi|192359843|ref|YP_001981164.1| 50S ribosomal protein L25/general stress protein Ctc [Cellvibrio
japonicus Ueda107]
gi|226736293|sp|B3PJN6.1|RL25_CELJU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|190686008|gb|ACE83686.1| ribosomal protein L25, Ctc-form [Cellvibrio japonicus Ueda107]
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 107/168 (63%), Gaps = 1/168 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
K+ A R G SR LR++ +VP IIYGG+K PV +S++HN + L+ E F S +
Sbjct: 5 FKLDATARNDLGKGASRRLRRLADQVPAIIYGGSKAPVNVSVSHNELLKHLQHEAFFSHV 64
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
++L I G E V+L++ Q H K VLH DF RVD K+H +VPLHFIN S VK
Sbjct: 65 IDLNIDGTSESVILKDVQRHPSKAQVLHLDFLRVDKNTKLHKQVPLHFINEATSVGVKTQ 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+ + ++ L ++CLP++LP+FIE++L +E +H+SD+KLP+GV
Sbjct: 125 GGKVVHNLTQLDVTCLPQDLPEFIEVDLAAIEAGQILHISDLKLPKGV 172
>gi|254787718|ref|YP_003075147.1| 50S ribosomal protein L25/general stress protein Ctc
[Teredinibacter turnerae T7901]
gi|237686716|gb|ACR13980.1| ribosomal protein L25/general stress protein Ctc [Teredinibacter
turnerae T7901]
Length = 209
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 3/180 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R +G SR LR VP I+YGG KDP I++ N L+ E F+S I+ L +
Sbjct: 10 AKARDDQGKGASRRLRHDNLVPAIVYGGEKDPQNIAIAQNEFVKHLENEAFYSHIVTLVV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ + V+L++ Q H K +LHADF RV +K+ +VPLHFIN E VKL +++
Sbjct: 70 DGEKQDVILKDLQRHPAKAQLLHADFLRVSRTQKLTTRVPLHFINEESCKGVKLQGGVVA 129
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIAT 181
+ +++L ISCLP++LP+FIE++L+ EV +H+SD+ LP GV + H + D + T
Sbjct: 130 HSLTELEISCLPQDLPEFIEVDLKDAEVGHIVHISDLNLPAGVESVALSHGEDHDQAVVT 189
>gi|407716988|ref|YP_006838268.1| 50S ribosomal protein L25 [Cycloclasticus sp. P1]
gi|407257324|gb|AFT67765.1| 50S ribosomal protein L25 [Cycloclasticus sp. P1]
Length = 216
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 4 IAFE-----RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSS 58
I+FE R G +R LRK VP +IYG ++PV I++ HN + H+ + E F S
Sbjct: 3 ISFELAASIRNDLGKGATRRLRKQEMVPAVIYGAGEEPVSITLGHNQLMHSTENEAFFSH 62
Query: 59 ILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
IL++++ GK E V+++ Q H K +++HADF RV ++K+ V VP+HFI E +P K
Sbjct: 63 ILSIDVDGKKESVIIKALQRHPAKNILMHADFMRVSMKEKLKVHVPIHFIGEEEAPGAK- 121
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ + D+ I CLP NLP+FIE+++ +E+ S+HLSDIKL G+ ++
Sbjct: 122 QGGVVTHSLVDVEIQCLPNNLPEFIEVDVSALEIGDSLHLSDIKLADGLEMV 173
>gi|344345142|ref|ZP_08775998.1| 50S ribosomal protein L25 [Marichromatium purpuratum 984]
gi|343803233|gb|EGV21143.1| 50S ribosomal protein L25 [Marichromatium purpuratum 984]
Length = 203
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 114/178 (64%), Gaps = 1/178 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I+A R+ G SR LR+ G+VP I+YGG+++P I++ HN + L+ E F+S +L L
Sbjct: 7 IVAQPRETVGKGASRRLRRAGEVPAIVYGGHQEPQMITLPHNELLKHLEHEAFYSHVLTL 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ + V+L++ Q H K + H DF RV +K+ + VPLHF+N E VK +
Sbjct: 67 QVGDETSSVVLKDLQRHPAKPFIQHVDFLRVTQGEKLRMSVPLHFLNEESCVGVKAGG-L 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+S ++++ +SCLP++LP++IEI++ MEV +HLS+++LP GV + H+ ++ +A
Sbjct: 126 VSRSLTEVEVSCLPQDLPEYIEIDMVAMEVGAILHLSELQLPAGVELAHAAGDEVVVA 183
>gi|261365424|ref|ZP_05978307.1| ribosomal protein L25, Ctc-form [Neisseria mucosa ATCC 25996]
gi|288566085|gb|EFC87645.1| ribosomal protein L25, Ctc-form [Neisseria mucosa ATCC 25996]
Length = 190
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ G++PGI+YG ++PV I+++H +++AL+KE+FH++++
Sbjct: 4 EIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVDHKTVFYALEKESFHTALIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + + + V++R+FQ+H +++ V H DFQ V ++ + ++VPLH +N+E S AVKL
Sbjct: 64 LSLNSETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVRIRVPLHIVNAESSQAVKLQGG 123
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIA 180
+S + + + + LP N+P +++++ K+ +HLS+I+LP GV SV E+ +A
Sbjct: 124 RVSLLNTTVEVVALPANIPAYLDLDCAKVVAGDILHLSNIQLPEGVESVSLKRNENLAVA 183
Query: 181 T 181
T
Sbjct: 184 T 184
>gi|94500015|ref|ZP_01306550.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bermanella
marisrubri]
gi|94427873|gb|EAT12848.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oceanobacter
sp. RED65]
Length = 211
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 4/189 (2%)
Query: 8 RKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R+ KGT SR LR+ GK P I+YGG+K+P ++++ + A + ETF S I+ L + G
Sbjct: 11 REVKGTGASRRLRREEGKTPAIVYGGDKEPQQVTLQLKELKKAFEDETFFSHIIKLNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V++++ Q H Y+ LV+H DF RV I +PLHF+N + VKL I++
Sbjct: 71 TAETVIVKDVQRHPYQNLVMHVDFLRVSKSTVIKQHIPLHFLNEDTCKGVKLQGGKITHN 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIATAI 183
++D+ + C LP+FIE++L +EV T +HLSD+KLP GV + H + D + T
Sbjct: 131 MTDIEVICEAGKLPEFIEVDLADVEVGTVLHLSDLKLPAGVEALELTHGADHDAAVLTVD 190
Query: 184 IPVNTLESD 192
+P + +D
Sbjct: 191 VPKGSASAD 199
>gi|148358613|ref|YP_001249820.1| 50S ribosomal protein L25 [Legionella pneumophila str. Corby]
gi|296108297|ref|YP_003619998.1| 50S ribosomal protein L25 [Legionella pneumophila 2300/99 Alcoy]
gi|166223693|sp|A5IAS4.1|RL25_LEGPC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148280386|gb|ABQ54474.1| 50S ribosomal protein L25, ribosomal 5S rRNA E- loop binding
protein [Legionella pneumophila str. Corby]
gi|295650199|gb|ADG26046.1| large subunit ribosomal protein L25 [Legionella pneumophila 2300/99
Alcoy]
Length = 219
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 127/204 (62%), Gaps = 8/204 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
+++ A R G SR LR++ KVP +IYGG+K P+ I +HN + AL+ E+ +SS+
Sbjct: 4 IQLEAQSRTDMGKGASRRLRRLENKVPAVIYGGSKKPMAIHFSHNKVIKALETESIYSSV 63
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVK-VPLHFINSEISPAVKL 118
++ + GKVE V+L+ Q H YK +VLH D QRV + K I VK VP+HFIN E SP +K
Sbjct: 64 FDITVDGKVEHVILKALQRHPYKPIVLHMDLQRV-SSKDILVKLVPVHFINEEQSPGIKA 122
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
I+ + ++ + I C K+LP+FIE+++ K+ ++ +HLSD+KLP+GV + D T
Sbjct: 123 GG-IVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPKGVQLT----VDVT 177
Query: 179 IATAIIPVNTLESDNNSSIEKEKN 202
+ PV ++ + SS E E+
Sbjct: 178 DGSHDAPVVSIHAAKVSSTELEET 201
>gi|333369959|ref|ZP_08462043.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychrobacter
sp. 1501(2011)]
gi|332968801|gb|EGK07849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychrobacter
sp. 1501(2011)]
Length = 225
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Query: 4 IAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
IA ++G SR LRK VP IIYGGN++P I++ +N ++ L+ E F S+IL +
Sbjct: 11 IARTDDQQGKGASRRLRKQNLVPAIIYGGNEEPTAIAIKNNELWKLLENEAFFSNILTIN 70
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G+ L ++++ Q H K +HADFQR+ +KI++ +P+HF+ E +P +K I+
Sbjct: 71 LDGEEHLAVIKDLQRHPSKGFPMHADFQRIVKGQKINMNIPVHFVGREEAPGIKAGG-IL 129
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
S +++D+ I CLP LP+++E+++ +E+ S+HL+DIKLP GV + ++P T +
Sbjct: 130 STLVTDIEIVCLPSALPEYLEVDVSGLEIGESLHLTDIKLPEGVIIFELDVDEPVDRTVV 189
>gi|335042005|ref|ZP_08535032.1| ribosomal protein L25 [Methylophaga aminisulfidivorans MP]
gi|333788619|gb|EGL54501.1| ribosomal protein L25 [Methylophaga aminisulfidivorans MP]
Length = 234
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 117/179 (65%), Gaps = 5/179 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++ A R +G SR LR GKVP ++YG K+PV I+++HN L +E F++ IL
Sbjct: 16 FEVQAEARTDEGKGASRRLRHAGKVPAVVYGAEKEPVSIALDHNQFIRHLAEEAFYAHIL 75
Query: 61 NLEIYGKVELVLLRNFQLH-AYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L I K E V+L++ Q H A ++HADF RVD + ++ + VPLHFI E + VK
Sbjct: 76 TLNIGKKKEQVVLKDLQRHPANDNKIIHADFLRVDAKHEMTMTVPLHFIGEEKAVGVKAG 135
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS---VIHSTEE 175
++S+V++++ I+CLP +LP+FIE+++ K+E++ +IHLS++ LP+GVS + H EE
Sbjct: 136 G-VVSHVMTEVEIACLPADLPEFIEVDISKLELDHAIHLSELVLPKGVSLPALSHGQEE 193
>gi|56460038|ref|YP_155319.1| 50S ribosomal protein L25 [Idiomarina loihiensis L2TR]
gi|68053046|sp|Q5QV04.1|RL25_IDILO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56179048|gb|AAV81770.1| Ribosomal protein L25 [Idiomarina loihiensis L2TR]
Length = 221
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 108/171 (63%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R KG SR LR KVP I+YGG +P+ ++++HN + + E F+S I+ L
Sbjct: 8 IQATVRTDKGKGASRRLRHEDKVPAILYGGQGEPIALALDHNKVNNMADYEAFYSHIVTL 67
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E GK +L++ Q H YK + H DFQRV+ K+H +PLHF+N + VK +
Sbjct: 68 EFDGKKHQAILKDMQRHPYKPKLTHLDFQRVEKGHKLHTNLPLHFLNETTAKGVKEEGGV 127
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST 173
+ + ++D+ I+ LPK+LP+++E+++ ++ V +IHL+D+KLP+GV ++ T
Sbjct: 128 VVHHVNDVEITVLPKDLPEYLEVDIAELSVGDTIHLTDLKLPKGVELVELT 178
>gi|349575576|ref|ZP_08887487.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria
shayeganii 871]
gi|348012844|gb|EGY51780.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria
shayeganii 871]
Length = 190
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 113/168 (67%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
KI A R+++G+ SR LR GK+P ++YG N+ P+ +S++H +++AL+KE FH++I+
Sbjct: 3 FKIEAQVREQQGSGASRRLRSEGKLPAVVYGENQQPLAVSVDHKTVFYALEKEAFHTAIV 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + GK V++R+FQ+H +++ V H DFQ V+ +K + +++PLH +N+E S AVKL S
Sbjct: 63 KLSLDGKEYDVIVRDFQMHPFRREVQHIDFQVVELDKPLKMRIPLHIVNAEKSQAVKLQS 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
+S + S + + PKN+P +E++ EK+ +HLSD+ P GV
Sbjct: 123 GRVSLLNSSVEVLVDPKNIPAALELDCEKVVAGDILHLSDVNYPEGVQ 170
>gi|300115103|ref|YP_003761678.1| ribosomal 5S rRNA E-loop-binding protein Ctc/l25/Tl5 [Nitrosococcus
watsonii C-113]
gi|299541040|gb|ADJ29357.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus
watsonii C-113]
Length = 215
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R ++G SR LR+ GKVP ++YG K+P+ + +HN+++ L + F+S IL + GK
Sbjct: 12 RAEQGKGASRRLRRAGKVPAVLYGAAKEPISLIFDHNLLFRHLSHDAFYSHILTIHANGK 71
Query: 68 VELVLLRNFQLHAYK-KLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V+L+ Q VLH D QRV +K+ +KVPLHFI E +P VK ++ +
Sbjct: 72 AEKVVLKALQRDPVNPNKVLHLDLQRVSAAQKLTIKVPLHFIGDETAPGVKQEGGTVARL 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++D+ +SCL K+LP++IE++L + V ++HLSD+KLP GV +
Sbjct: 132 LNDVEVSCLAKDLPEYIEVDLANLGVGETVHLSDLKLPGGVEI 174
>gi|407794326|ref|ZP_11141353.1| 50S ribosomal protein L25 [Idiomarina xiamenensis 10-D-4]
gi|407212926|gb|EKE82787.1| 50S ribosomal protein L25 [Idiomarina xiamenensis 10-D-4]
Length = 220
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 107/163 (65%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR+ KVP I+YGG K+P+ ++++HN + + E F+S IL L++ GK
Sbjct: 13 RTDLGKGASRRLRRAEKVPAILYGGEKEPLALTLDHNKVNNMADYEAFYSHILTLDVDGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++++ Q H YK + H DFQRV+ K+H +PLHF+N + VK ++ + +
Sbjct: 73 KYQAIVKDMQRHPYKPKLTHIDFQRVEAGHKLHTNIPLHFLNEATAKGVKDEGGMVVHHV 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+D+ I+CLPK+LP+++E+++ + + ++HL+D+KLP+GV ++
Sbjct: 133 TDVEITCLPKDLPEYLEVDIAALALGDTLHLTDLKLPQGVELV 175
>gi|350572259|ref|ZP_08940564.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria
wadsworthii 9715]
gi|349790515|gb|EGZ44424.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria
wadsworthii 9715]
Length = 190
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 120/185 (64%), Gaps = 5/185 (2%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R+ +GT SR LR+ GK P ++YG ++ I+++H +++AL+KE+FH++++
Sbjct: 4 EIQAAVREAQGTGASRRLRREGKTPAVLYGEDQKATAIAVDHKTVFYALEKESFHTTLIK 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L + GKV V++R+FQ+H +++ V H DFQ VD K + +++PLH +N+E S AVKL S
Sbjct: 64 LSLDGKVYDVIVRDFQIHPFRQEVQHIDFQVVDFNKPLRMRLPLHVVNAEKSQAVKLQSG 123
Query: 122 IISNVISDLYISCL--PKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+S + + C+ PKN+P F+E+N E + +HL+D+ P GVS + + + D +
Sbjct: 124 RVS--VLSTTVDCIVNPKNIPAFLELNCENVVAGDILHLTDVAYPEGVSSV-ALKRDANL 180
Query: 180 ATAII 184
A A +
Sbjct: 181 AVATV 185
>gi|333985476|ref|YP_004514686.1| 50S ribosomal protein L25 [Methylomonas methanica MC09]
gi|333809517|gb|AEG02187.1| 50S ribosomal protein L25 [Methylomonas methanica MC09]
Length = 204
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 114/169 (67%), Gaps = 1/169 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ IA R + G+S ++ +R+ GKVP +IYGG+ P + ++HN + L E +S +L
Sbjct: 5 FEFIAEARSETGSSAAKVVRRKGKVPAVIYGGSDAPEMLILDHNDLLKHLAHEAVYSHVL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++++ G+ E +L++ Q H K +LH DF RV+ + K+ V VPLHFIN ++S VK
Sbjct: 65 DVKVDGRTEKAVLKHIQRHPAKPQILHVDFMRVEKDHKLKVHVPLHFINEDVSVGVK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
I+++ ++D+ I+CLPK+LP++IE+N+ +E+ +++HLSD+ LP GV +
Sbjct: 124 GIVNHTMADVEIACLPKDLPEYIEVNMAAVEIGSALHLSDLVLPAGVEI 172
>gi|52842858|ref|YP_096657.1| 50S ribosomal protein L25 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54295490|ref|YP_127905.1| 50S ribosomal protein L25 [Legionella pneumophila str. Lens]
gi|54298641|ref|YP_125010.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella
pneumophila str. Paris]
gi|378778547|ref|YP_005186986.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein
[Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|397665242|ref|YP_006506780.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
gi|397668326|ref|YP_006509863.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
gi|68053068|sp|Q5WTE8.1|RL25_LEGPL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053069|sp|Q5X1N8.1|RL25_LEGPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053082|sp|Q5ZS67.1|RL25_LEGPH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|52629969|gb|AAU28710.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53752426|emb|CAH13858.1| hypothetical protein lpp2705 [Legionella pneumophila str. Paris]
gi|53755322|emb|CAH16818.1| hypothetical protein lpl2577 [Legionella pneumophila str. Lens]
gi|307611527|emb|CBX01204.1| hypothetical protein LPW_29031 [Legionella pneumophila 130b]
gi|364509363|gb|AEW52887.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein
[Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|395128653|emb|CCD06871.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
gi|395131737|emb|CCD10030.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
Length = 219
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 114/171 (66%), Gaps = 4/171 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
+++ A R G SR LR++ KVP +IYGG+K P+ I +HN + AL+ E+ +SS+
Sbjct: 4 IQLEAQSRTDMGKGASRRLRRLENKVPAVIYGGSKKPMAIHFSHNKVIKALETESIYSSV 63
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVK-VPLHFINSEISPAVKL 118
++ + GKVE V+L+ Q H YK +VLH D QRV + K I VK VP+HFIN E SP +K
Sbjct: 64 FDITVDGKVEHVILKALQRHPYKPIVLHMDLQRV-SSKDILVKLVPVHFINEEQSPGIKA 122
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
I+ + ++ + I C K+LP+FIE+++ K+ ++ +HLSD+KLP+GV +
Sbjct: 123 GG-IVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKLPKGVQL 172
>gi|357406690|ref|YP_004918614.1| 50S ribosomal protein L25 [Methylomicrobium alcaliphilum 20Z]
gi|351719355|emb|CCE25031.1| 50S ribosomal protein L25 [Methylomicrobium alcaliphilum 20Z]
Length = 206
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 126/203 (62%), Gaps = 5/203 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ +A R++ GT++++++R+ GKVP +IYGG P + ++HN + L E +S IL
Sbjct: 5 FEFVAEARERPGTAYAKSVRRQGKVPAVIYGGEAGPEMLVLDHNEVVKHLAHEAVYSHIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + GKV+ +L++ Q H K VLH DF RV +K+ +VPLHFIN EI K+
Sbjct: 65 DVVVAGKVQKAILKSVQRHPAKAKVLHLDFLRVKANEKLKAQVPLHFINEEICVGAKVGG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDP 177
++ +++ D+ ++CLP++LP++IE++L +++ S+H+S + P+GV + H + D
Sbjct: 125 VVMHSLV-DIEVACLPEDLPEYIEVDLASLDLGQSLHVSQLSAPKGVEFLALSHGDDHDA 183
Query: 178 TIA-TAIIPVNTLESDNNSSIEK 199
++ I+P +++ +S E+
Sbjct: 184 DVSVVTIVPPKVEKTETDSETEE 206
>gi|90416946|ref|ZP_01224875.1| probable ribosomal protein L25 [gamma proteobacterium HTCC2207]
gi|90331293|gb|EAS46537.1| probable ribosomal protein L25 [gamma proteobacterium HTCC2207]
Length = 215
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R+ G SR LR++ +VP I+YGG K P +IS+ H + AL+ E F+S ++ L+I G
Sbjct: 12 REDTGKGASRRLRRLAAEVPAIVYGGKKTPAQISLIHKDVAKALENEAFYSHVIALDIDG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K E V+L++ Q H K ++LH DF RV+ + + K P+HFIN +I VK+ +I++
Sbjct: 72 KSEDVILKDVQRHPIKPVILHLDFLRVNKKTLLQTKAPIHFINEDICVGVKIGGGLIAHT 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ ISCLP++LP++IE+++ +E+ ++H+SDI P+GV +
Sbjct: 132 MTEIDISCLPQDLPEYIEVDMAAVEIGQTLHISDIVFPKGVESV 175
>gi|429212747|ref|ZP_19203912.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. M1]
gi|428157229|gb|EKX03777.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. M1]
Length = 203
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
Query: 5 AFERKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR+ G VP +IYGG K PV +++ I L+ E S ++ L
Sbjct: 8 AQARSDLGKGASRRLRRNAGLVPAVIYGGEKAPVSVTLELREIAKLLENEAAFSHVIALN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G E VL++ Q H K V+HADF RV + K+ VPLHF+N E + VK +
Sbjct: 68 VDGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFLNEETAVGVKQGGGEV 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
S+VIS++ +SCLPK+LP+FIE++L K+EV +HLSD+KLP+GV ++
Sbjct: 128 SHVISEVEVSCLPKDLPEFIEVDLAKVEVGQIVHLSDLKLPKGVELVQ 175
>gi|160872526|ref|ZP_02062658.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli]
gi|159121325|gb|EDP46663.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli]
Length = 237
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 121/201 (60%), Gaps = 3/201 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
++ A RK G+ SR LR++ +VP I+YG ++ P+ IS+ HN + AL+ E F+S I
Sbjct: 8 FELTAQTRKMFGSGASRRLRRLENRVPAILYGASEPPLPISLEHNQVLRALENEAFYSHI 67
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L + I G + +L++ Q HAYK +LH D QRV ++KI + VPLHF +P VK
Sbjct: 68 LTINIEGTEQKAVLKDLQRHAYKPYILHMDLQRVSAKEKITMSVPLHFKGETEAPGVKDE 127
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH--STEEDP 177
+++ +++ + + CLP +LP+++E+++ K+ ++ SI LS + LP GV + S EED
Sbjct: 128 GGVLTKLLTSVEVRCLPVSLPEYLEVDVSKLRLDESISLSQLHLPEGVELTAAISHEEDR 187
Query: 178 TIATAIIPVNTLESDNNSSIE 198
+ IP +E D ++ E
Sbjct: 188 PLVNIHIPRAVVEEDLTAAPE 208
>gi|392307370|ref|ZP_10269904.1| 50S ribosomal protein L25 [Pseudoalteromonas citrea NCIMB 1889]
Length = 203
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R GT SR LR KVP I+YG +K+ + +++ HN + A + E F+S IL L I G+
Sbjct: 13 RADLGTGASRRLRHADKVPAILYGADKEALALTLEHNKVIKAQEDEGFYSHILTLNIAGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H +K V+H DFQRVD KIH KVP+HF+N + A +++ +
Sbjct: 73 SVEAILKDIQRHPFKPKVMHMDFQRVDASHKIHTKVPVHFLNED---AATKGGNTVAHQV 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ I+CLP LP+FIEI++ +EV ++HLSD+ LP GV+ +
Sbjct: 130 TEIEITCLPAALPEFIEIDVAALEVGVTLHLSDVTLPAGVTSV 172
>gi|119505828|ref|ZP_01627894.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2080]
gi|119458326|gb|EAW39435.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2080]
Length = 216
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 110/182 (60%), Gaps = 4/182 (2%)
Query: 8 RKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R +G SR LR++ GKVPG++YGG + IS+ + +++ETF++S+LN+ + G
Sbjct: 12 RVDEGKGASRRLRRLEGKVPGVVYGGEAAAISISLIRKDLEKMMEQETFYASVLNVNVDG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
VE +L++ Q H K +H DF RV +K I V VPLHF N ++ VK+ ++ +
Sbjct: 72 SVETAILKDVQRHPAKGFPMHVDFLRVQADKAIKVNVPLHFTNEDVCHGVKMGGGMVQHQ 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV---SVIHSTEEDPTIATAI 183
+D+ + CLP ++P +IE+++ +E+ +HLSD+ LP GV ++ + D IA+ I
Sbjct: 132 ATDMEVQCLPGDIPDYIEVDMSAVELGQIVHLSDVTLPAGVESTALALGDDHDLAIASVI 191
Query: 184 IP 185
P
Sbjct: 192 AP 193
>gi|407803838|ref|ZP_11150670.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
sp. W11-5]
gi|407022248|gb|EKE34003.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
sp. W11-5]
Length = 212
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 114/185 (61%), Gaps = 4/185 (2%)
Query: 8 RKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ ++PGI+YGG+ +P +++ + AL+ E F+S +L L+I G
Sbjct: 12 RSDVGKGASRRLRRQEARIPGIVYGGSAEPQMVTLELRELVKALENEAFYSHVLTLKIDG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K + +LR+ Q H K +HADF RVD KI ++VPLHF+N + VK I++
Sbjct: 72 KTQQAVLRDLQRHPAKGTPMHADFLRVDKTHKITMQVPLHFLNEDKCVGVKQQGGKITHN 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIATAI 183
S++ +SCLP+NLP+F+EI++ ++++ +HLSDIKLP+GV ++ H + D + +
Sbjct: 132 ASEVEVSCLPQNLPEFLEIDMADVKLDQVVHLSDIKLPKGVELVALTHGADHDLPVVSVH 191
Query: 184 IPVNT 188
P T
Sbjct: 192 APKGT 196
>gi|329119316|ref|ZP_08248003.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464663|gb|EGF10961.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Neisseria
bacilliformis ATCC BAA-1200]
Length = 211
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 111/163 (68%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +GT SR LR+ G+VP ++YG N++ V I+++H +++AL+K FH+S++ L + GK
Sbjct: 31 REAQGTGASRRLRRAGQVPAVLYGDNQEAVAIAVDHKTVFYALEKSAFHTSLIKLTLDGK 90
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V++R+FQ+H +++ V+H DFQ VD K + +++P+ +N+E S AVKL S +S +
Sbjct: 91 TQDVIVRDFQIHPFRQQVVHLDFQAVDLNKPLRLRLPVAVVNAEKSKAVKLQSGRVSLLA 150
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ + + PKN+P +E++ ++ +HLSDIK P GVS +
Sbjct: 151 TTVEVLVDPKNIPSALELDCAEVVAGDILHLSDIKYPEGVSSV 193
>gi|442608876|ref|ZP_21023617.1| LSU ribosomal protein L25p [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441749488|emb|CCQ09679.1| LSU ribosomal protein L25p [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 204
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 107/163 (65%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R GT SR LR +VP I+YG ++ V ++++H+ + A + E F++ IL L I G+
Sbjct: 13 RADLGTGASRRLRNADQVPAILYGAGQEAVALTLDHSKVLKAQEDEGFYTHILTLNIGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H YK V H DFQRVD +K+H KVP+HFIN E A K ++++ +
Sbjct: 73 SVEAILKDVQRHPYKPKVTHLDFQRVDPSQKLHTKVPVHFINEE--KATK-GGNLVAHHV 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ I CLPKNLP+F+E+++ K+ V ++HLSDIKLP GV+ +
Sbjct: 130 TEIEIVCLPKNLPEFVEVDMAKVAVGQTLHLSDIKLPAGVTSV 172
>gi|381158261|ref|ZP_09867494.1| ribosomal protein L25, Ctc-form [Thiorhodovibrio sp. 970]
gi|380879619|gb|EIC21710.1| ribosomal protein L25, Ctc-form [Thiorhodovibrio sp. 970]
Length = 204
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R G SR LR+ G+VPGI+YGG++ P + H+ I +E+F+S++L+
Sbjct: 7 ISAQARTDVGKGASRRLRRTGQVPGILYGGDRLPEMFMLPHSEIVKYAAQESFYSTLLDF 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ G V+L++ Q H K +LH DFQRV +K+ + VPLHF N +I +KL
Sbjct: 67 DLAGAKTQVVLKDLQRHPAKPFILHVDFQRVSKGEKLRMTVPLHFENEDICAGIKLGGQA 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
N +++L I CLP +LP++I ++++KME+ ++H+SD+ LP+GV + S ++D
Sbjct: 127 SHN-LTELDIQCLPADLPEYIAVDIQKMELGQTLHVSDLVLPKGVELDTSVDQD 179
>gi|345870956|ref|ZP_08822905.1| 50S ribosomal protein L25 [Thiorhodococcus drewsii AZ1]
gi|343921110|gb|EGV31834.1| 50S ribosomal protein L25 [Thiorhodococcus drewsii AZ1]
Length = 206
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 115/179 (64%), Gaps = 2/179 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+IA R+ G SR LR+ G+VP I+YG +++P +S+ HN + L E F+S +L+L
Sbjct: 7 VIAQPRETAGKGASRRLRRTGQVPVILYGAHQEPEMLSVAHNELLKHLDNEAFYSHVLDL 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ K V+L++ Q H K +LH DF RV ++K+ + VPLHF+N E K +
Sbjct: 67 KVGDKATKVVLKDMQRHPSKPFILHVDFMRVSQDEKLKMVVPLHFLNEETCAGAKAGG-L 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED-PTIA 180
+S+ I+++ I CLPK+LP++I ++L ++E+ +HLS++ +P GV++ H+ E D P +A
Sbjct: 126 VSHNITEVEIVCLPKDLPEYITLDLAELEIGAVVHLSELVMPEGVALSHAPESDEPVVA 184
>gi|254482824|ref|ZP_05096061.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium
HTCC2148]
gi|214036905|gb|EEB77575.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium
HTCC2148]
Length = 220
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 114/185 (61%), Gaps = 4/185 (2%)
Query: 8 RKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R+ G SR LR++ GKVP IIYGG+KDP +++ I +L+ E F+S +L + + G
Sbjct: 12 REDTGKGASRRLRRLAGKVPAIIYGGDKDPQSLTLVRKDIEKSLENEAFYSQVLEVNVAG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+V+ +L++ Q H K V+HADF R+D + I V VP+HF+N E VK+ +I +
Sbjct: 72 EVQKAILKDLQRHPAKNNVMHADFLRIDEKVAIKVNVPIHFLNEEDCAGVKMEGGMIQHQ 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH---STEEDPTIATAI 183
+D+ +SCLP ++P++IE+++ ++ IHLS++ LP GV+ + + D IA+ +
Sbjct: 132 ATDIEVSCLPGDIPEYIEVDMLEVITGQIIHLSEVTLPEGVTSVALSLGEDHDLAIASVV 191
Query: 184 IPVNT 188
P T
Sbjct: 192 APKGT 196
>gi|307544466|ref|YP_003896945.1| 50S ribosomal protein L25 [Halomonas elongata DSM 2581]
gi|307216490|emb|CBV41760.1| 50S ribosomal protein L25 [Halomonas elongata DSM 2581]
Length = 217
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 117/187 (62%), Gaps = 4/187 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+ A R G SR LR+ +VP IIYGG+K P I+++ Y ++++E F SS++
Sbjct: 6 LTASVRNDLGKGASRRLRRANEQVPAIIYGGDKAPEAIAVDKTHFYKSIEEEAFFSSVIT 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+E+ GK + V++R+ Q H YK LV HADF R+D +I ++VPLH +N E +K
Sbjct: 66 IEVEGKPQQVVVRDLQRHPYKPLVTHADFMRIDATHEITMRVPLHVVNEESCKGIKDEGG 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPT 178
+ + +++ +SCLPK+LP ++EI++ ++ + T++HLSD+KLP GV+++ H + D
Sbjct: 126 ELHVLSNEVEVSCLPKDLPDYLEIDIAEVTLGTTLHLSDLKLPAGVTLVALTHGEDHDNA 185
Query: 179 IATAIIP 185
+ + P
Sbjct: 186 VLSVTQP 192
>gi|294669393|ref|ZP_06734472.1| ribosomal protein L25, Ctc-form [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308803|gb|EFE50046.1| ribosomal protein L25, Ctc-form [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 190
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 111/163 (68%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +GT SR LR+ G+VP ++YG N++ V I+++H +++AL+KE+FH+S++ L + GK
Sbjct: 10 REAQGTGASRRLRREGQVPAVLYGENQEAVAIALDHKTVFYALEKESFHTSLIKLALNGK 69
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V++R+FQ+H +++ + H D Q VD K + +++P+H +N+E S AVKL S +S +
Sbjct: 70 THDVIVRDFQVHPFRQQIQHLDLQVVDLNKPLKIRLPIHVVNAEQSKAVKLQSGRVSLLT 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ + + PKN+P +E++ ++ +HLSDI+ P GVS +
Sbjct: 130 TGVEVIVDPKNIPAALELDCAQVVAGDILHLSDIQYPEGVSSV 172
>gi|407697453|ref|YP_006822241.1| 50S ribosomal protein L25 [Alcanivorax dieselolei B5]
gi|407254791|gb|AFT71898.1| 50S ribosomal protein L25 [Alcanivorax dieselolei B5]
Length = 215
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 113/193 (58%), Gaps = 4/193 (2%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R KG SR LR++ +VP ++YGG +P +S+ + AL+ E F+S +L L+
Sbjct: 9 AEARSDKGKGASRRLRRLQDRVPAVLYGGTAEPAMLSLEMRELRKALENEAFYSHVLTLK 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + +LR+ Q H +HADF RVDT I + VPLHFIN E S VK I
Sbjct: 69 LEGKEQQAVLRDLQRHPSSGFPIHADFLRVDTSHAITMTVPLHFINEETSVGVKKEGGEI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIA 180
+ +S++ +SCLP++LP+FIE+++ + + +HLSD+ LP+GV+++ H D +A
Sbjct: 129 HHNVSEVQVSCLPQDLPEFIEVDMADVALEQVVHLSDLVLPKGVTLVELSHGESHDQPVA 188
Query: 181 TAIIPVNTLESDN 193
P SD+
Sbjct: 189 AVHKPKVRGGSDD 201
>gi|410635717|ref|ZP_11346325.1| large subunit ribosomal protein L25 [Glaciecola lipolytica E3]
gi|410144800|dbj|GAC13530.1| large subunit ribosomal protein L25 [Glaciecola lipolytica E3]
Length = 214
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 105/163 (64%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR+ KVP I+YG KDPV +++ HN + A + E F+S +L L I G+
Sbjct: 13 RSDLGKGASRRLRREDKVPAILYGAGKDPVSLTLAHNKVIQAQEFEAFYSHVLTLNIAGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
L+++ Q H YK V H DF RVD K++ VPLHFIN E + ++K++ + +
Sbjct: 73 KVDALVKDMQRHPYKPKVTHIDFLRVDKNKEVTTNVPLHFINEEKADSIKIHGGHAEHHM 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+D+ I+CLP LP+FIE++L+ +E+ ++HLSD+ +P GV+++
Sbjct: 133 NDVEITCLPGVLPEFIEVDLQAVELGQTVHLSDLVVPEGVTLV 175
>gi|399519464|ref|ZP_10760259.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112560|emb|CCH36817.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 201
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ + VP +IYGG+K P IS+ + L+ E S +L+L++ G
Sbjct: 12 RSDLGKGASRRLRRNVSMVPAVIYGGDKAPQSISLLAKDLAKLLENEAAFSHVLSLDVAG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VL++ Q H K VLHADFQRV +K+ VPLHFIN + VK IS+
Sbjct: 72 TKENVLIKALQRHPAKGFVLHADFQRVVAGQKLTAHVPLHFINEATAVGVKQQGGEISHT 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
IS++ +SCLPK+LP+FIE+++ +EV ++H+SD+KLP+GV ++
Sbjct: 132 ISEVEVSCLPKDLPEFIEVDMAAVEVGQTVHMSDLKLPKGVELV 175
>gi|331005803|ref|ZP_08329161.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989]
gi|330420384|gb|EGG94692.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC1989]
Length = 213
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 112/181 (61%), Gaps = 4/181 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R+ G SR LR+ VPGIIYGG+K P IS+ + L+ E F+S I+++E
Sbjct: 10 AESRELTGKGASRRLRRESSMVPGIIYGGSKKPQMISLLQKDLIKHLENEAFYSHIISVE 69
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G + V+L++ Q H K L+ H D RV KK +VPLHFIN E S VK+ +I
Sbjct: 70 VDGAAQDVILKDLQRHPAKPLIYHLDLLRVSKTKKFTTRVPLHFINEETSKGVKVQGGMI 129
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIA 180
S+ +++L ISCLP +LP++IE++L +E+ ++H+SD+ LP+GV + H + D +A
Sbjct: 130 SHSVTELEISCLPADLPEYIEVDLADVEIGQTVHISDLTLPKGVESVQLSHGHDHDLPVA 189
Query: 181 T 181
+
Sbjct: 190 S 190
>gi|388259161|ref|ZP_10136335.1| ribosomal protein L25/general stress protein Ctc [Cellvibrio sp.
BR]
gi|387937119|gb|EIK43676.1| ribosomal protein L25/general stress protein Ctc [Cellvibrio sp.
BR]
Length = 202
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
K+ A R G SR LR++ K VP +IYGGN P+ +S++ N + L+ E F+S I
Sbjct: 5 FKLDATARNDLGKGASRRLRRLAKQVPAVIYGGNVAPISVSVSENELMKHLEHEAFYSHI 64
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
++L + G + V+L++ Q H K +VLH DF R+D K+H VPLHFIN S VK+
Sbjct: 65 ISLNVDGAAQDVILKDVQRHPSKPVVLHLDFLRIDKSTKVHTHVPLHFINEAGSKGVKIQ 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+ + ++ L I C P LP+FIE++L EV T IH+SD+KLP GV
Sbjct: 125 GGKVVHNLTQLDIICFPHQLPEFIEVDLADAEVGTIIHISDLKLPAGV 172
>gi|53804648|ref|YP_113532.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus
capsulatus str. Bath]
gi|68053083|sp|Q60A15.1|RL25_METCA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|53758409|gb|AAU92700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus
capsulatus str. Bath]
Length = 202
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR GKVP ++YGG +PV + ++H+ + L+ E +S +L + G+
Sbjct: 12 RHQLGKGASRRLRHAGKVPAVLYGGGGEPVSLLLDHHKVVKNLENEATYSHVLTIRFDGR 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E +L+ Q H K +V+H DFQRV KI V VPLHFIN E S VK ++S+ +
Sbjct: 72 EENAILKAVQRHPAKPVVMHLDFQRVSAADKIRVHVPLHFINQESSVGVK-KGGVVSHGM 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
D+ + CLPK+LP++IE++L ++++ IHLSD+KLP GV +
Sbjct: 131 VDVEVDCLPKDLPEYIEVDLAQVDIGGIIHLSDLKLPAGVEI 172
>gi|410622130|ref|ZP_11332969.1| large subunit ribosomal protein L25 [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410158528|dbj|GAC28343.1| large subunit ribosomal protein L25 [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 211
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 106/170 (62%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
K+ A R G SR LR KVP I+YGG + P+ I++ HN + A + E F+S +L
Sbjct: 6 FKLDATIRTDIGKRASRRLRLQDKVPAIVYGGEEAPISITLEHNKVNQAQEFEAFYSHVL 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ I GK VL+++ Q H +K V H DFQRV + + VP+HFIN+ S A+KLN
Sbjct: 66 TINIDGKKVEVLVKDMQRHPFKPKVTHIDFQRVIAGQTLTTNVPIHFINAAESDAIKLNG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ ++D+ + C+PK+LP++IEI+L +E+ +IHLSD+K P+GV +
Sbjct: 126 GHAEHHMNDIEVLCMPKDLPEYIEIDLRNIEMGQTIHLSDVKFPKGVESV 175
>gi|359395830|ref|ZP_09188882.1| 50S ribosomal protein L25 [Halomonas boliviensis LC1]
gi|357970095|gb|EHJ92542.1| 50S ribosomal protein L25 [Halomonas boliviensis LC1]
Length = 214
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 117/203 (57%), Gaps = 5/203 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ + VP ++YGG K IS+ Y A++ E+F SS++ L I G
Sbjct: 11 RNDLGKGASRRLRRANQQVPAVVYGGEKGAQSISVEKTAFYKAIEDESFFSSVIKLMIEG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K E V++R+ Q H +K L+ HADF RVD +I + VPLH E +K + +
Sbjct: 71 KEEQVVVRDLQRHPFKPLLTHADFLRVDATHEITMNVPLHVTGEETCVGIKDQGGELHVL 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIATAI 183
+++ ISCLPK+LP ++E+++ +E+ T++HLSD+ LP GV+ + H E D + +
Sbjct: 131 ANEVAISCLPKDLPDYLEVDISALELGTTLHLSDLTLPAGVTSVDLSHGEEHDNAVLSVT 190
Query: 184 -IPVNTLESDNNSSIEKEKNNNS 205
+ V E D + + E E++ ++
Sbjct: 191 KVKVRAEEEDEDGASEGEEDTSA 213
>gi|374263609|ref|ZP_09622157.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella
drancourtii LLAP12]
gi|363536199|gb|EHL29645.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella
drancourtii LLAP12]
Length = 220
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 110/165 (66%), Gaps = 4/165 (2%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR++ KVP +IYGG K P+ I HN + AL+ E+ +SS+ ++
Sbjct: 8 AESRTDMGKGASRRLRRLENKVPAVIYGGEKKPMSIHFQHNKVIKALETESIYSSVFDIT 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVK-VPLHFINSEISPAVKLNSCI 122
I GKVE V+L+ Q H YK LV+H D QRV ++K + VK VPLHF+N + +P +K +
Sbjct: 68 IDGKVEHVILKALQRHPYKPLVMHMDLQRV-SKKDVLVKLVPLHFVNEQQAPGIKAGG-M 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
I++ ++ + I C K+LP+FIE+++ K+ ++ IHLS++KLP+GV
Sbjct: 126 INHTMTQIEIRCQAKDLPEFIEVDMAKVALDDVIHLSNLKLPKGV 170
>gi|406946700|gb|EKD77822.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 244
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 110/172 (63%), Gaps = 1/172 (0%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R+ G +R LR+ +VP I+YG K+P+ IS++HN + AL+ E +S IL L +
Sbjct: 9 AQARQSTGKPAARRLRREDRVPAILYGAGKEPMPISLSHNKVIKALEHEAIYSHILTLNV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G E V+L+ H K ++H DF R++T++KIH++VPLHF+ SP +K + ++S
Sbjct: 69 EGASEKVVLKALMRHPTKPKIMHMDFLRINTKEKIHMRVPLHFLGEAKSPGLK-DGGVLS 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+I+ L I+CLP +LP+FIE+++ + + SIHLS I +P V + H+ ++
Sbjct: 128 KLITHLEITCLPLDLPEFIEVDVSGLTIGDSIHLSVISMPNNVVLTHAIADE 179
>gi|116052816|ref|YP_793133.1| 50S ribosomal protein L25 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296391492|ref|ZP_06880967.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PAb1]
gi|313107333|ref|ZP_07793528.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016]
gi|355652201|ref|ZP_09056636.1| 50S ribosomal protein L25, Ctc-form [Pseudomonas sp. 2_1_26]
gi|416874252|ref|ZP_11918021.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa 152504]
gi|421170456|ref|ZP_15628408.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 700888]
gi|421176924|ref|ZP_15634582.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa CI27]
gi|424944552|ref|ZP_18360315.1| probable ribosomal protein L25 [Pseudomonas aeruginosa NCMG1179]
gi|451985063|ref|ZP_21933294.1| LSU ribosomal protein L25p [Pseudomonas aeruginosa 18A]
gi|122257173|sp|Q02G03.1|RL25_PSEAB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115588037|gb|ABJ14052.1| putative ribosomal protein L25 [Pseudomonas aeruginosa UCBPP-PA14]
gi|310880030|gb|EFQ38624.1| putative ribosomal protein L25 [Pseudomonas aeruginosa 39016]
gi|334843656|gb|EGM22242.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa 152504]
gi|346060998|dbj|GAA20881.1| probable ribosomal protein L25 [Pseudomonas aeruginosa NCMG1179]
gi|354824409|gb|EHF08660.1| 50S ribosomal protein L25, Ctc-form [Pseudomonas sp. 2_1_26]
gi|404523394|gb|EKA33818.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 700888]
gi|404530294|gb|EKA40301.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa CI27]
gi|451757237|emb|CCQ85817.1| LSU ribosomal protein L25p [Pseudomonas aeruginosa 18A]
Length = 204
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 104/165 (63%), Gaps = 1/165 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ G VP ++YGG+K+P +++ I L+ E S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIALNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VL++ Q H K V+HADF RV + K+ VPLHFIN E++ VK + IS+
Sbjct: 71 AKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQSGGEISHT 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
IS++ +SCLPK+LP+FIE+++ K+E+ +HLSD+K P+GV ++
Sbjct: 131 ISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQ 175
>gi|406941535|gb|EKD74001.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 236
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G SR LR KVP I+YG + V ++++H+ HAL E F+S IL L++ K
Sbjct: 14 REDIGKGASRRLRHADKVPAIVYGAGEQAVSLTLDHSKTLHALSHEAFYSHILTLKVGSK 73
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E V+L++ Q H + + H DF R+ ++K+H+ VPLHFI E +P +K + S+++
Sbjct: 74 NEKVILKDIQRHPARPRITHIDFLRIRADQKLHMHVPLHFIGEENAPGIK-EGGVFSHLM 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+D+ + CLP +LP+FIE++ + ++ SIHLS++KLP+GV +
Sbjct: 133 NDIEVICLPADLPEFIEVDASNLALDQSIHLSELKLPKGVEL 174
>gi|49089156|gb|AAT51649.1| PA4671, partial [synthetic construct]
Length = 205
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 103/165 (62%), Gaps = 1/165 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ G VP ++YGG+K+P +++ I L+ E S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIALNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VL++ Q H K V+HADF RV + K+ VPLHFIN E++ VK IS+
Sbjct: 71 AKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGGEISHT 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
IS++ +SCLPK+LP+FIE+++ K+E+ +HLSD+K P+GV ++
Sbjct: 131 ISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQ 175
>gi|15599866|ref|NP_253360.1| 50S ribosomal protein L25 [Pseudomonas aeruginosa PAO1]
gi|107099662|ref|ZP_01363580.1| hypothetical protein PaerPA_01000680 [Pseudomonas aeruginosa PACS2]
gi|218893768|ref|YP_002442637.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa LESB58]
gi|254238589|ref|ZP_04931912.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719]
gi|254244437|ref|ZP_04937759.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192]
gi|386060828|ref|YP_005977350.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa M18]
gi|392986340|ref|YP_006484927.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa DK2]
gi|416855501|ref|ZP_11911532.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa 138244]
gi|418588025|ref|ZP_13152042.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa MPAO1/P1]
gi|418590132|ref|ZP_13154047.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa MPAO1/P2]
gi|419754581|ref|ZP_14280941.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PADK2_CF510]
gi|420141859|ref|ZP_14649498.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa CIG1]
gi|421156097|ref|ZP_15615551.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 14886]
gi|421163230|ref|ZP_15621957.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 25324]
gi|421182733|ref|ZP_15640205.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa E2]
gi|421519229|ref|ZP_15965901.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PAO579]
gi|71153159|sp|Q9HVC4.1|RL25_PSEAE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736352|sp|B7V0L7.1|RL25_PSEA8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|9950927|gb|AAG08058.1|AE004881_1 probable ribosomal protein L25 [Pseudomonas aeruginosa PAO1]
gi|126170520|gb|EAZ56031.1| hypothetical protein PACG_04744 [Pseudomonas aeruginosa C3719]
gi|126197815|gb|EAZ61878.1| hypothetical protein PA2G_05295 [Pseudomonas aeruginosa 2192]
gi|218773996|emb|CAW29811.1| probable ribosomal protein L25 [Pseudomonas aeruginosa LESB58]
gi|334842858|gb|EGM21457.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa 138244]
gi|347307134|gb|AEO77248.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa M18]
gi|375041165|gb|EHS33878.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa MPAO1/P1]
gi|375051083|gb|EHS43556.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa MPAO1/P2]
gi|384398994|gb|EIE45397.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PADK2_CF510]
gi|392321845|gb|AFM67225.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa DK2]
gi|403245416|gb|EJY59233.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa CIG1]
gi|404346214|gb|EJZ72565.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PAO579]
gi|404519476|gb|EKA30228.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 14886]
gi|404529478|gb|EKA39514.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa ATCC 25324]
gi|404541479|gb|EKA50836.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa E2]
gi|453042721|gb|EME90460.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PA21_ST175]
Length = 204
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 103/165 (62%), Gaps = 1/165 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ G VP ++YGG+K+P +++ I L+ E S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIALNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VL++ Q H K V+HADF RV + K+ VPLHFIN E++ VK IS+
Sbjct: 71 AKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGGEISHT 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
IS++ +SCLPK+LP+FIE+++ K+E+ +HLSD+K P+GV ++
Sbjct: 131 ISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQ 175
>gi|71279934|ref|YP_270232.1| 50S ribosomal protein L25/general stress protein Ctc [Colwellia
psychrerythraea 34H]
gi|109893355|sp|Q47Y88.1|RL25_COLP3 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71145674|gb|AAZ26147.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Colwellia
psychrerythraea 34H]
Length = 211
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 103/161 (63%), Gaps = 3/161 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR KVP I+YG N++P+ +++ H ++ A ++E F+S +L L I GK
Sbjct: 12 RTDLGKGASRRLRHANKVPAILYGENEEPISLTLEHKNVFRAQQEEAFYSQVLTLNIAGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
L+++ Q H +K++V+H DF R+D + +H P+HF+N + + N IS+ +
Sbjct: 72 PVECLIKDMQRHPFKQVVMHLDFLRIDAKHAVHANAPIHFLNEDEAAKTGAN---ISHHM 128
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
+++ I+CLPK+LP+FI I+L +E+ +IHLSD+ P GV+
Sbjct: 129 NEIAITCLPKDLPEFISIDLAGLELGQTIHLSDVTFPAGVT 169
>gi|226946187|ref|YP_002801260.1| 50S ribosomal protein L25/general stress protein Ctc [Azotobacter
vinelandii DJ]
gi|259646681|sp|C1DEV6.1|RL25_AZOVD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226721114|gb|ACO80285.1| ribosomal protein L25 [Azotobacter vinelandii DJ]
Length = 198
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ +VP +IYGG+K+P IS+ I ++ E S ++ L I G
Sbjct: 11 RSDLGKGASRRLRRNAAQVPAVIYGGDKEPQSISILAKDITKLIEDEAAFSHVITLNIAG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VL++ Q H K V+HADF RV + K+ VPLHF+N+E S VK +S+V
Sbjct: 71 ATETVLIKALQRHPSKAAVMHADFLRVVADHKLSAVVPLHFVNAETSVGVKQQGGEVSHV 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
IS++ +SCLPK+LP+FIE++L ++EV +HLS++ +P GV ++
Sbjct: 131 ISEVEVSCLPKDLPEFIEVDLAQVEVGQIVHLSNLSVPAGVELV 174
>gi|390952362|ref|YP_006416121.1| 50S ribosomal protein L25 [Thiocystis violascens DSM 198]
gi|390428931|gb|AFL75996.1| ribosomal protein L25, Ctc-form [Thiocystis violascens DSM 198]
Length = 202
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+IA R G SR LR+ G VP I+YG + +P IS++HN + L+ E F+S +L+L
Sbjct: 7 VIAQPRALSGKGASRRLRRTGLVPAIVYGAHLEPEMISVSHNELLKHLEHEAFYSHVLDL 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+I V+L++ Q H K +LH DF RV ++K+ + VP+HF+N E S VK+
Sbjct: 67 KIGDVASKVVLKDMQRHPAKPFILHVDFMRVSQDEKLRMMVPIHFLNEEKSKGVKIGGQ- 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
S+ I+++ + CLPK+LP+FI I+L +ME+ +HLS++++P GV + H + D
Sbjct: 126 ASHKITEVEVICLPKDLPEFIAIDLLEMEIGDIVHLSELQMPSGVVLAHQPDPD 179
>gi|88810857|ref|ZP_01126114.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231]
gi|88792487|gb|EAR23597.1| Ribosomal protein L25 [Nitrococcus mobilis Nb-231]
Length = 233
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 117/189 (61%), Gaps = 3/189 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ A R +G S SR LR+ K+P I+YG KD + ++++ + ++ ETF S I+
Sbjct: 5 LKLDAAVRTDQGKSASRRLRRAKKLPAILYGAKKDAIALALDEEQVMGLMRDETFFSQII 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKL-VLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
++ I E +L++ Q H K L VLH D QRV +K+ +VPLHFIN E + VK
Sbjct: 65 DVNIGDTTERAILKDLQRHPVKPLVVLHMDLQRVTAGQKLRQRVPLHFINEEKAVGVKQG 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ +++ D+ I CLP++LP +IE+++ + ++ + HLSD+KLP+GV V+ + +DP
Sbjct: 125 GTLHHDLL-DVEIECLPRHLPAYIEVDIATLGLDEAYHLSDLKLPKGV-VLTALGDDPDH 182
Query: 180 ATAIIPVNT 188
T+++ + T
Sbjct: 183 DTSVVSIYT 191
>gi|374620517|ref|ZP_09693051.1| LSU ribosomal protein L25P [gamma proteobacterium HIMB55]
gi|374303744|gb|EHQ57928.1| LSU ribosomal protein L25P [gamma proteobacterium HIMB55]
Length = 223
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 8 RKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R +G SR LR++ KVP IIYGG+ PV +S+ + L+KE F+S+I+ + G
Sbjct: 12 RSDEGKGASRRLRRLEAKVPAIIYGGDSAPVSLSLIRKDLEKHLEKEAFYSAIIEVAYDG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K E +L+ Q H K +HADF RV+ +K I V VPLHF+N E VKL I +
Sbjct: 72 KKEKAILKALQRHPAKDFPMHADFFRVEADKAIKVSVPLHFVNEETCVGVKLGGGRIQHT 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV---SVIHSTEEDPTIATAI 183
++++ + LP +LP+FIE+++ ++V +HLSD+KLP GV ++ + D +A+ +
Sbjct: 132 VNEVEVLALPADLPEFIEVDMADIQVGDIVHLSDLKLPDGVTSTALALGEDRDMGVASVL 191
Query: 184 IP 185
P
Sbjct: 192 AP 193
>gi|152985832|ref|YP_001350652.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa PA7]
gi|452877561|ref|ZP_21954837.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa VRFPA01]
gi|166223704|sp|A6VC67.1|RL25_PSEA7 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|150960990|gb|ABR83015.1| ribosomal protein L25, Ctc-form [Pseudomonas aeruginosa PA7]
gi|452185690|gb|EME12708.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
aeruginosa VRFPA01]
Length = 204
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 103/165 (62%), Gaps = 1/165 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ +VP +IYGG+K+P +++ I L+ E S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRNAAQVPAVIYGGDKEPQSVTLELREIAKLLENEAAFSHVIALNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VL++ Q H K V+HADF RV + K+ VPLHFIN +++ VK IS+
Sbjct: 71 AKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEDVAVGVKQAGGEISHT 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
IS++ +SCLPK+LP+FIE+++ K+E+ +HLSD+K P+GV ++
Sbjct: 131 ISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQ 175
>gi|146306088|ref|YP_001186553.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
mendocina ymp]
gi|421504248|ref|ZP_15951191.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
mendocina DLHK]
gi|166223706|sp|A4XR55.1|RL25_PSEMY RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|145574289|gb|ABP83821.1| LSU ribosomal protein L25P [Pseudomonas mendocina ymp]
gi|400345018|gb|EJO93385.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
mendocina DLHK]
Length = 201
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ + VP +IYGG+K P IS+ + L+ E S +L + + G
Sbjct: 11 RSDLGKGASRRLRRNVSMVPAVIYGGDKAPQSISLLAKDLAKLLENEAAFSHVLAVNVAG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V+++ Q H K VLHADFQRV +K+ VPLHFIN + VK IS+
Sbjct: 71 ATENVVIKALQRHPAKGFVLHADFQRVVAGQKLTAHVPLHFINEATAVGVKQQGGEISHT 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
I+++ +SCLPK+LP+FIE+++ +EV ++H+SD+KLP+GV ++
Sbjct: 131 INEVEVSCLPKDLPEFIEVDMAAVEVGQTVHMSDLKLPKGVELV 174
>gi|329897177|ref|ZP_08271917.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088]
gi|328921332|gb|EGG28726.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088]
Length = 210
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 4/197 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VPG++YGG+KDPV +S+ I +L+ E F+S +L L
Sbjct: 12 RSDIGKGASRRLRRLENLVPGVVYGGHKDPVSVSVVSKDIEKSLENEAFYSHVLTLNFGD 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E +L++ Q H V+H DF RV + I V+VPLHF N + VK+ ++ +
Sbjct: 72 HTESAVLKDLQRHPATNKVVHLDFLRVVAGEAIKVQVPLHFTNEDTCKGVKIGGGMVQHQ 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH---STEEDPTIATAI 183
++++ +SCLPK++P+FIE+++ +EV +HLSD+ LP+GV+ + + D +A+
Sbjct: 132 MTEIEVSCLPKDIPEFIEVDMTNVEVGAIVHLSDLTLPKGVTSVALSLGADHDLAVASVT 191
Query: 184 IPVNTLESDNNSSIEKE 200
P + +SS E +
Sbjct: 192 PPKGGAAASGDSSDEAD 208
>gi|443473462|ref|ZP_21063486.1| LSU ribosomal protein L25p [Pseudomonas pseudoalcaligenes KF707]
gi|442904199|gb|ELS29315.1| LSU ribosomal protein L25p [Pseudomonas pseudoalcaligenes KF707]
Length = 199
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ +VP ++YGG+K P IS+ + L+ E S ++ L++ G
Sbjct: 11 RSDLGKGASRRLRRNEAQVPAVVYGGDKAPQSISLLAKELAKLLENEAAFSHVIALDVAG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VL++ Q H K V+HADFQRV +K+ VPLHFIN S VK +S+
Sbjct: 71 ATETVLIKALQRHPSKGFVVHADFQRVVAGQKLTAHVPLHFINEATSVGVKQGGGEVSHT 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
I+++ +SCLPK+LP+FIE++L +EV +HLSD+K+P GV ++
Sbjct: 131 IAEVEVSCLPKDLPEFIEVDLAAVEVGQIVHLSDLKVPAGVELV 174
>gi|408374420|ref|ZP_11172107.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
hongdengensis A-11-3]
gi|407765695|gb|EKF74145.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
hongdengensis A-11-3]
Length = 213
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Query: 5 AFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR++ +VPGI+YGG +P IS+ + AL+ E F+S +L L+
Sbjct: 9 AESRSDAGKGASRRLRRLQERVPGILYGGEAEPQMISVELRELKKALETEAFYSHVLTLK 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G +LR+ Q H K H DF RVD KI ++VPLHFIN S VK I
Sbjct: 69 LDGADVQAVLRDMQRHPAKGHPTHVDFLRVDKTHKITMQVPLHFINEAGSVGVKKQGGEI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ IS++ +SCLP+NLP++IE+++ +E+N +HLSD+KLP+GV +
Sbjct: 129 QHNISEVEVSCLPQNLPEYIEVDMAAVELNQVVHLSDLKLPKGVEL 174
>gi|330502027|ref|YP_004378896.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
mendocina NK-01]
gi|328916313|gb|AEB57144.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
mendocina NK-01]
Length = 204
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 104/164 (63%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ + VP +IYGG+K P IS+ + L+ E S +L+L++ G
Sbjct: 12 RSDLGKGASRRLRRNVSMVPAVIYGGDKAPQSISLLAKDLAKLLENEAAFSHVLSLDVAG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VL++ Q H K VLHADFQRV +K+ VPLHFIN S VK + +
Sbjct: 72 TKENVLIKALQRHPAKGFVLHADFQRVVAGQKLTAHVPLHFINEASSVGVKQGGGEVLHA 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLPK+LP+FIE+++ K+ V+ ++HLSDIKLP+GV ++
Sbjct: 132 LNEVEVSCLPKDLPEFIEVDMAKVAVDQTVHLSDIKLPKGVELV 175
>gi|304311481|ref|YP_003811079.1| 50S ribosomal protein L25 [gamma proteobacterium HdN1]
gi|301797214|emb|CBL45434.1| 50S ribosomal protein L25 [gamma proteobacterium HdN1]
Length = 206
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ G ++P IIYGG+ P I++ + + AL+ E F+S +L L + G
Sbjct: 12 RTDLGKGASRRLRRAGTEIPAIIYGGDAAPATITVVYKELVKALENEAFYSHVLTLNLDG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
V+L++ Q H + HADF RVD +KI + VPLHF+N + VK IS+
Sbjct: 72 NAVQVVLKDLQRHPARNTPTHADFMRVDATRKIQMVVPLHFVNEDKCVGVKTQGGAISHQ 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+S++ ISCL K+LP+F+E+++ + + +IHL+DIKLP GV+++
Sbjct: 132 LSEVLISCLAKDLPEFLEVDVAGLALGHAIHLADIKLPAGVNIV 175
>gi|359786967|ref|ZP_09290040.1| 50S ribosomal protein L25 [Halomonas sp. GFAJ-1]
gi|359295733|gb|EHK59995.1| 50S ribosomal protein L25 [Halomonas sp. GFAJ-1]
Length = 211
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ + VP ++YGG K IS+ Y A++ E+F SS++ L + G
Sbjct: 11 RNDLGKGASRRLRRANQLVPAVVYGGEKGAQSISVEKTAFYKAIEDESFFSSVIKLVVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V++R+ Q H +K L+ HADF RVD +I + VPLH +N E +K + +
Sbjct: 71 TEEQVVVRDLQRHPFKPLLTHADFMRVDATHEITINVPLHVVNEEKCVGIKDQGGELHVL 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTI 179
+++ ISCLPK+LP F+E+++ K+E+ T++HLSD+ LP GV+ + H E D +
Sbjct: 131 ANEVAISCLPKDLPDFLEVDISKVELGTTLHLSDLTLPAGVTSVDLSHGEEHDNAV 186
>gi|92113647|ref|YP_573575.1| 50S ribosomal protein L25 [Chromohalobacter salexigens DSM 3043]
gi|122420093|sp|Q1QXD2.1|RL25_CHRSD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91796737|gb|ABE58876.1| LSU ribosomal protein L25P [Chromohalobacter salexigens DSM 3043]
Length = 215
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ K V IIYGG+K P I++ + Y A++ E F SS++N+++ G
Sbjct: 11 RHDLGKGASRRLRRENKKVAAIIYGGSKTPQPITLEKSAFYKAIEDEAFFSSVINIDLEG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E V++R+ Q H YK LV HADF RVD +I + VPLH E VK ++ +
Sbjct: 71 QSEQVIIRDIQRHPYKALVTHADFMRVDATHEITMNVPLHINGEEACKGVKDEDGVLHVL 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEED 176
+D+ ISCLP LP+++E+++ + + ++HLSD+ LP GVS++ H E D
Sbjct: 131 ANDVEISCLPGKLPEYLEVDVTNLGLGETLHLSDLPLPEGVSLVALSHGEEHD 183
>gi|254447756|ref|ZP_05061221.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015]
gi|198262536|gb|EDY86816.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015]
Length = 224
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 113/181 (62%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G SR LR+ K+P ++YG + DPV ++++H + ++ E F S IL L+I G
Sbjct: 12 REDLGKGASRRLRRADKLPAVLYG-SGDPVSLTLSHAEMILMVENEAFFSHILELDIDGN 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E ++R+ Q H +K L+ H DFQRV ++I V VP+HFIN E S VKL + +++
Sbjct: 71 KENAIVRDMQRHPFKNLLTHIDFQRVVAGQEITVSVPVHFINEETSKGVKLEGGEVHHLM 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIATAII 184
+++ + C+P++LP++IE+++ ++ + ++HLSD+K+P GV + H E D + +
Sbjct: 131 TEIEVVCMPRHLPEYIEVDIAELGLGETLHLSDLKMPEGVKSVALSHGEEHDDGVVSITK 190
Query: 185 P 185
P
Sbjct: 191 P 191
>gi|225025469|ref|ZP_03714661.1| hypothetical protein EIKCOROL_02367 [Eikenella corrodens ATCC
23834]
gi|224941753|gb|EEG22962.1| hypothetical protein EIKCOROL_02367 [Eikenella corrodens ATCC
23834]
Length = 190
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 108/167 (64%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
KI A R+++GT SR LR+ G+VP ++YG D +S++H ++ AL+KE FH++I+
Sbjct: 3 FKIEAQVREEQGTGASRRLRREGRVPAVVYGAGSDATAVSVDHKTVFFALQKEEFHTAII 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + GK V++R+FQ+H ++ V H DFQ V+ K I +++PLH +N+E S AVKL +
Sbjct: 63 KLALNGKEHDVIVRDFQMHPVRREVRHIDFQIVEAGKPIKIRLPLHVVNAEKSQAVKLQN 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
++ + + + + PK++P + ++ EK+ +HLSDI+ P GV
Sbjct: 123 SRVALLSTSVEVLLDPKHIPSELVLDCEKVVAGDVLHLSDIQYPEGV 169
>gi|381393899|ref|ZP_09919617.1| large subunit ribosomal protein L25 [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379330171|dbj|GAB54750.1| large subunit ribosomal protein L25 [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 221
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 104/166 (62%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR GKVP IIYG K+PV +S++HN + A E F+S +L + I GK
Sbjct: 13 RTDLGKGASRRLRHAGKVPAIIYGAGKEPVSLSLDHNKVNQAQDFEAFYSHVLTINIDGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E L+++ Q H +K V H DF R+ + + VP+HF+N + + ++KL + +
Sbjct: 73 KEEALVKDMQRHPFKPKVTHIDFIRIVAGELLTTNVPIHFMNEDKADSIKLEGGHAEHHM 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST 173
+++ I+CLPK+LP+FIEI++ ++++ ++HLSD+ P+GV + T
Sbjct: 133 NEIEITCLPKDLPEFIEIDVANVKLDETLHLSDVTFPKGVESVELT 178
>gi|77359996|ref|YP_339571.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis TAC125]
gi|109893380|sp|Q3IK85.1|RL25_PSEHT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|76874907|emb|CAI86128.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis TAC125]
Length = 204
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ GT SR LR+ KVP I+YG NK+ I+++H + A + E F++ IL L I G+
Sbjct: 13 REQTGTGASRRLRREDKVPAIVYGANKEATSITLDHKDVIKAQESEGFYTQILTLNIGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H +K V H DFQR+D +K+H VP+HF+ ++ KL + ++ +
Sbjct: 73 SVETILKDIQRHPFKPKVTHLDFQRIDANQKLHTIVPIHFVGEDV--VEKLGTTVVRQ-L 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ ISC PK +P F+ +++ K+ S+H+SD+ LP GVS I
Sbjct: 130 TEIEISCFPKAIPDFVTVDVSKLVAGDSLHISDVALPAGVSSI 172
>gi|292493880|ref|YP_003529319.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus
halophilus Nc4]
gi|291582475|gb|ADE16932.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus
halophilus Nc4]
Length = 211
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 103/163 (63%), Gaps = 1/163 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R ++G SR LR+ GKVP I+YG K+PV ++++HN+++ L E F+S IL + GK
Sbjct: 12 RGEQGKGASRRLRRAGKVPAILYGAGKEPVSLTLDHNLLFQHLGYEAFYSHILTIHANGK 71
Query: 68 VELVLLRNFQLH-AYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E +L+ Q A VLH D QRV +K+ + V LHF+ +++ V+ +++ +
Sbjct: 72 TEKAVLKALQRDPANPNKVLHLDLQRVSPTQKLSISVHLHFMGDDVARGVRQEGGVVARL 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++D+ I+CL K+LP+ IE++L + ++HLSD+KLP GV +
Sbjct: 132 LNDVEITCLAKDLPESIEVDLTDLGAGEALHLSDLKLPEGVEI 174
>gi|429463183|ref|YP_007184646.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|429338697|gb|AFZ83120.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
Length = 141
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
KVE V+LR+ Q H YK+ VLH DFQRV + I+ KVPLHF+N+E SPAVKL II++V
Sbjct: 8 KVEQVILRSVQWHPYKQQVLHVDFQRVSANQNINTKVPLHFLNAETSPAVKLGGAIINHV 67
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
I++L ISCLP LP FIEI+L +E+ SIH SDI LP GVS + ++ DP +ATA V
Sbjct: 68 ITELEISCLPAVLPPFIEIDLSNIELGNSIHFSDIILPAGVSY-NGSDPDPLLATAF--V 124
Query: 187 NTLESDNNSSIEKEKN 202
N D + +E++K+
Sbjct: 125 NEGVDDEDQKVEEDKS 140
>gi|359451799|ref|ZP_09241188.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20480]
gi|392537151|ref|ZP_10284288.1| 50S ribosomal protein L25 [Pseudoalteromonas marina mano4]
gi|358042425|dbj|GAA77437.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20480]
Length = 205
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ + ++ H + A + E F++ IL L + G+
Sbjct: 13 RVETGTGASRRLRREDKVPAILYGADKEALSLTFAHKDMIKAQEDEGFYTHILTLNVGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H +K + H DFQRVD K+ KVPLHFI EI V + + +
Sbjct: 73 KVEAILKDIQRHPFKPKLTHLDFQRVDATHKLTTKVPLHFIGEEI---VTKAGATVVHQL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+D+ ISCLPK LP+FIE+N+ ++ SIH+SD++LP GV+ +
Sbjct: 130 TDVEISCLPKALPEFIEVNVSELVAGDSIHISDLQLPAGVASV 172
>gi|406915162|gb|EKD54270.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 238
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 106/174 (60%), Gaps = 6/174 (3%)
Query: 1 MKIIAFE-----RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETF 55
M I FE R+ G SR LR KVP +IYG + P ++++HN +AL E F
Sbjct: 1 MATIKFELEADVRQDIGKGASRRLRHTDKVPAVIYGAGEAPESLTLDHNKALNALSHEAF 60
Query: 56 HSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPA 115
+S IL L++ K E V+L+ Q H K + H DF R+ ++K+H+ VP HF+ E +P
Sbjct: 61 YSHILTLKVGKKNEKVILKAVQRHPAKPRIAHIDFLRIRADQKLHMHVPFHFLGEENAPG 120
Query: 116 VKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+K S++++D+ + CLP +LP+FIEI+ + ++ SIHLS++KLP+GV +
Sbjct: 121 LKEGGA-FSHLMNDVEVVCLPADLPEFIEIDASNLLLDQSIHLSELKLPKGVEL 173
>gi|332532472|ref|ZP_08408350.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis ANT/505]
gi|332038115|gb|EGI74562.1| 50S ribosomal protein L25 [Pseudoalteromonas haloplanktis ANT/505]
Length = 203
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ + ++ H + A + E F++ IL L + G+
Sbjct: 13 RVETGTGASRRLRREDKVPAILYGADKEALSLTFAHKDMIKAQEDEGFYTHILTLNVDGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+L++ Q H +K + H DFQRVD K KVPLHFI EI V + + +
Sbjct: 73 AVEVILKDIQRHPFKPKLTHLDFQRVDATHKFQTKVPLHFIGEEI---VTKAGATVVHQL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ I+CLPK LP+FIE+++ K V S+H+SD+ P+GVS +
Sbjct: 130 TEVEITCLPKALPEFIEVDVSKFVVGDSVHISDLTFPKGVSSV 172
>gi|383935157|ref|ZP_09988595.1| large subunit ribosomal protein L25 [Rheinheimera nanhaiensis
E407-8]
gi|383703922|dbj|GAB58686.1| large subunit ribosomal protein L25 [Rheinheimera nanhaiensis
E407-8]
Length = 201
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR KVP IIYGG+K I++ H+ + A E F+S IL + + G+
Sbjct: 13 RTDSGKGASRRLRHEDKVPAIIYGGSKPAQSITLEHSKLLKAQSFEAFYSHILTINVAGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+++ Q H +K V+H DFQRV+ +++H VP+HF+N E A ++ +
Sbjct: 73 EVKAIVKAMQRHPFKPKVMHVDFQRVEAGQELHTTVPVHFVNEE---AAMKKGGVVVHAA 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
+++ ISCLPK+LP+FIE+++ +EV +HLSDIK P+GV+ +
Sbjct: 130 NEIEISCLPKDLPEFIEVDMSDVEVGAHLHLSDIKAPKGVTFVQ 173
>gi|381401366|ref|ZP_09926271.1| 50S ribosomal protein L25/general stress protein Ctc [Kingella
kingae PYKK081]
gi|380833645|gb|EIC13508.1| 50S ribosomal protein L25/general stress protein Ctc [Kingella
kingae PYKK081]
Length = 188
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 107/165 (64%), Gaps = 5/165 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R ++GT SR LR +VP ++YG + I+++H +Y AL+KETF + +L L I GK
Sbjct: 9 RSEQGTGASRRLRHNAQVPAVVYGLGETKA-ITVDHKEMYFALQKETFFTQVLKLSIDGK 67
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V++R++Q+H K+ V H DFQ +D + + +K+P+H +N+EIS AVKL S +S ++
Sbjct: 68 EQDVIVRDYQMHPVKRQVTHIDFQAIDVNQPVRIKLPVHIVNAEISHAVKLQSGRVSLLV 127
Query: 128 SDLYISCL--PKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ + CL PKN+P +E++ EK+ +HLSDIK P GV I
Sbjct: 128 T--VVDCLVDPKNIPAALELDCEKVVAGDILHLSDIKYPEGVQSI 170
>gi|254428105|ref|ZP_05041812.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881]
gi|196194274|gb|EDX89233.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881]
Length = 215
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Query: 5 AFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR++ +VPGI+YGG +P IS+ + AL+ E F+S IL L+
Sbjct: 9 AESRSDTGKGASRRLRRLQERVPGILYGGEAEPQMISVELRELKKALENEAFYSHILTLK 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G +LR+ Q H K LH D RVD KI + VPLHFIN E S VK I
Sbjct: 69 LDGASVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMNVPLHFINEESSIGVKKQGGEI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ +++ +SCLP++LP+FIE+++ E+ T IHLSD+KLP+GV +
Sbjct: 129 QHNYAEVEVSCLPQHLPEFIEVDMANAELETVIHLSDLKLPKGVEL 174
>gi|333899119|ref|YP_004472992.1| 50S ribosomal protein L25 [Pseudomonas fulva 12-X]
gi|333114384|gb|AEF20898.1| 50S ribosomal protein L25 [Pseudomonas fulva 12-X]
Length = 206
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
Query: 5 AFERKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR+ +VP +IYGG+K P+ IS+ L+ E S +LNL
Sbjct: 9 AEARSDLGKGASRRLRRNASQVPAVIYGGDKAPLSISLVAKDFAKLLENEAAFSHVLNLS 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK E VL++ Q H K VLHADF RV +K+ VPLHFIN S VK +
Sbjct: 69 VDGKKENVLIKALQRHPAKGYVLHADFIRVVAGQKLTAHVPLHFINEATSVGVKQKGGEV 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ ++++ +SCLPK+LP+FIE++ ++++ ++HLSDIKLP+GV ++
Sbjct: 129 LHSLNEVEVSCLPKDLPEFIEVDFANVDLDQTVHLSDIKLPKGVELV 175
>gi|448747302|ref|ZP_21728962.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-bindin
[Halomonas titanicae BH1]
gi|445564994|gb|ELY21107.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-bindin
[Halomonas titanicae BH1]
Length = 214
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ + VP ++YGG K I++ Y A++ E+F SS++ L I G
Sbjct: 11 RNDLGKGASRRLRRANQQVPAVVYGGEKGAQSIAVEKTAFYKAIEDESFFSSVIKLMIEG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K E V++R+ Q H +K L+ HADF RVD +I + VPLH E +K + +
Sbjct: 71 KEEQVVVRDLQRHPFKPLLTHADFLRVDATHEITINVPLHVTGEEKCVGIKDQGGELHVL 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTI 179
+++ ISCLPK+LP FIE+++ +E+ T++HLSD+ LP GV+ + H E D +
Sbjct: 131 ANEVAISCLPKDLPDFIEVDIAAVELGTTLHLSDLTLPAGVTSVDLSHGEEHDNAV 186
>gi|333375257|ref|ZP_08467076.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella
kingae ATCC 23330]
gi|332971129|gb|EGK10094.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella
kingae ATCC 23330]
Length = 188
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 107/165 (64%), Gaps = 5/165 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R ++GT SR LR +VP ++YG + I+++H +Y AL+KETF + +L L I GK
Sbjct: 9 RSEQGTGASRRLRHNAQVPAVVYGLGETKA-ITVDHKEMYFALQKETFFTQVLKLSIDGK 67
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V++R++Q+H K+ V H DFQ +D + + +K+P+H +N+EIS AVKL S +S ++
Sbjct: 68 EQNVIVRDYQMHPVKRQVTHIDFQAIDVNQPVRIKLPVHIVNAEISHAVKLQSGRVSLLV 127
Query: 128 SDLYISCL--PKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ + CL PKN+P +E++ EK+ +HLSDIK P GV I
Sbjct: 128 T--VVDCLVDPKNIPAALELDCEKVVAGDILHLSDIKYPEGVQSI 170
>gi|414071923|ref|ZP_11407881.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. Bsw20308]
gi|410805686|gb|EKS11694.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. Bsw20308]
Length = 203
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ + ++ H + A + E F++ IL L + G+
Sbjct: 13 RVETGTGASRRLRREDKVPAILYGADKEALSLTFAHKDMIKAQEDEGFYTHILTLNVDGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+L++ Q H +K + H DFQRVD K KVPLHFI EI V + + +
Sbjct: 73 AIEVILKDIQRHPFKPKLTHLDFQRVDATHKFQTKVPLHFIGEEI---VTKAGATVVHQL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ I+CLPK LP+FIE+++ K V S+H+SD+ P+GVS +
Sbjct: 130 TEVEITCLPKALPEFIEVDVSKFVVGDSVHISDLTFPKGVSSV 172
>gi|374702487|ref|ZP_09709357.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. S9]
Length = 216
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 112/192 (58%), Gaps = 2/192 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
I A R G SR LR+ VP ++YGG K P IS+ L+ E S IL+
Sbjct: 6 IDAQARSDLGKGASRRLRRNASLVPAVVYGGEKAPQSISLVAKDFAKLLENEASFSHILS 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L I G E VL++ Q H K VLHADF RV +K+ +VPLHFIN + + AVK
Sbjct: 66 LSIDGAKENVLIKALQRHPSKGFVLHADFIRVVAGQKLTTQVPLHFINEDKAVAVKKQGG 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIA 180
IS+ +++ IS LP+NLP+FIE+++ K+EV ++HLSD+ LP+GV ++ + + D +A
Sbjct: 126 EISHTATEVEISVLPRNLPEFIEVDMAKIEVGQTLHLSDLVLPKGVELVALAHDSDLAVA 185
Query: 181 TAIIPVNTLESD 192
A +P T D
Sbjct: 186 NAHMPRVTKAED 197
>gi|119477473|ref|ZP_01617664.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2143]
gi|119449399|gb|EAW30638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2143]
Length = 216
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 111/182 (60%), Gaps = 4/182 (2%)
Query: 8 RKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
RK G SR LR++ KV GI+YGG P ++ N I + E F +S+++L + G
Sbjct: 12 RKDLGKGASRRLRRLENKVLGIVYGGKNKPTPVTFAMNEIVKLAENEAFFTSLVDLNLDG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K E V++++ Q H ++ ++H DF RV + KI ++VP HF N + VK+ +S+
Sbjct: 72 KSEQVVIKDMQRHPARETIMHVDFLRVSAKTKITMQVPFHFTNEDTCHGVKIEGGSVSHA 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG---VSVIHSTEEDPTIATAI 183
++D+ I+CLPK+LP++IE+++ ++V ++HLSD+ LP+G V++ H + D ++
Sbjct: 132 LNDIEITCLPKDLPEYIEVDMAALKVGDNVHLSDLVLPKGVESVALAHGEDHDLLVSAVN 191
Query: 184 IP 185
P
Sbjct: 192 AP 193
>gi|338997717|ref|ZP_08636410.1| 50S ribosomal protein L25 [Halomonas sp. TD01]
gi|338765399|gb|EGP20338.1| 50S ribosomal protein L25 [Halomonas sp. TD01]
Length = 213
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ + VP ++YGG K IS+ Y A++ E+F SS++ L I G
Sbjct: 11 RNDLGKGASRRLRRANQQVPAVVYGGEKGAQSISVEKTAFYKAIEDESFFSSVIKLVIDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V++R+ Q H +K L+ HADF RVD +I + VPLH + E +K + +
Sbjct: 71 TEEQVVVRDLQRHPFKPLLTHADFLRVDATHEITMNVPLHVVGEEKCVGIKDQGGELHTL 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTI 179
+++ ISCLPK+LP F+E+++ +E+ T++HLSD+ LP GV+ + H E D I
Sbjct: 131 ANEVAISCLPKDLPDFLEVDISNVELGTTLHLSDLTLPAGVTSVDLSHGEEHDNAI 186
>gi|88704033|ref|ZP_01101748.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71]
gi|88701860|gb|EAQ98964.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71]
Length = 221
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
+ I A R G SR LR+ + +P IIYG KDP +++ + AL+ E F+S +
Sbjct: 5 LAIAATVRSDLGKGASRRLRRSVDHIPAIIYGAGKDPAPLTIVRKDLEKALENEAFYSQV 64
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+++ + G V+ +L++ Q H + V+HADF RVD + I V +PLHFIN E VK+
Sbjct: 65 IDVSVDGDVQPAILKDLQRHPARNDVMHADFLRVDAKVAIKVNIPLHFINEEKCHGVKIE 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
II +++++L + CLP +P++IE+++E + IH+SD+KLP GV
Sbjct: 125 GGIIEHLLTELEVLCLPGLIPEYIEVDMENVTTADIIHISDLKLPEGV 172
>gi|365920140|ref|ZP_09444492.1| ribosomal protein L25, Ctc-form [Cardiobacterium valvarum F0432]
gi|364578498|gb|EHM55700.1| ribosomal protein L25, Ctc-form [Cardiobacterium valvarum F0432]
Length = 219
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G SR LR+ G VP I+YGG + P+ I+++ + + K ++F+S I+ L++ G+
Sbjct: 17 RQDNGKGASRRLRREGLVPAIVYGGEEKPLSIAISQDSLVRYGKFDSFYSQIICLQVEGQ 76
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V++R+ Q H YK L H DFQR+ +++ V LHFIN E S VK ++ +
Sbjct: 77 GDIEVIVRDVQRHLYKPLYQHLDFQRIVRGQELQATVSLHFINEESSVGVKAGG-LVEHH 135
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++ + I CLP+NLP+ IEI++ + + IHL D+KLP+GV ++H E + I+
Sbjct: 136 LNSVDIVCLPRNLPENIEIDMAEAALGDVIHLRDLKLPQGVRLVHEDERAEVVVAQIVHP 195
Query: 187 NTLESDN 193
N +D+
Sbjct: 196 NRAAADD 202
>gi|359435126|ref|ZP_09225355.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20652]
gi|392535317|ref|ZP_10282454.1| 50S ribosomal protein L25 [Pseudoalteromonas arctica A 37-1-2]
gi|357918263|dbj|GAA61604.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20652]
Length = 203
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ + ++ H + A + E F++ IL L + G+
Sbjct: 13 RVETGTGASRRLRREDKVPAILYGADKEALSLTFAHKDMIKAQEDEGFYTHILTLNVDGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+L++ Q H +K + H DFQRVD K KVPLHFI +I V + + +
Sbjct: 73 AVEVILKDIQRHPFKPKLTHLDFQRVDATHKFQTKVPLHFIGEDI---VTKAGATVVHQL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ I+CLPK LP+FIE+++ K V S+H+SD+ P+GVS +
Sbjct: 130 TEVEITCLPKALPEFIEVDVSKFVVGDSVHISDLTFPKGVSSV 172
>gi|270159183|ref|ZP_06187839.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968]
gi|289165989|ref|YP_003456127.1| 50S ribosomal protein L25 [Legionella longbeachae NSW150]
gi|269987522|gb|EEZ93777.1| 50S ribosomal protein L25 [Legionella longbeachae D-4968]
gi|288859162|emb|CBJ13091.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella
longbeachae NSW150]
Length = 218
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 105/166 (63%), Gaps = 2/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR++ +VP +IYGG+K P I HN + AL+ E+ +SS+ ++
Sbjct: 8 AQTRTDMGKGASRRLRRLENQVPAVIYGGDKKPTSIHFQHNKVIKALETESIYSSVFDIT 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GKVE V+L+ Q H YK +V+H D QRV + VP+HFIN E +P +K II
Sbjct: 68 VDGKVEHVILKALQRHPYKPVVMHMDLQRVSKTDVLVKLVPIHFINEEKAPGIKAGG-II 126
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++ ++ + + C K+LP+FI +++ +++V+ +HLS +KLP+GV +
Sbjct: 127 NHTMTQVEVRCQAKDLPEFINVDMSEVKVDDIVHLSHLKLPKGVQL 172
>gi|359442051|ref|ZP_09231931.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20429]
gi|358036063|dbj|GAA68180.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20429]
Length = 203
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ + ++ H + A + E F++ IL L + G+
Sbjct: 13 RVETGTGASRRLRREDKVPAILYGADKEALSLTFAHKDMIKAQEDEGFYTHILTLNVDGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+L++ Q H +K + H DFQRVD K KVPLHFI +I V + + +
Sbjct: 73 AVEVILKDIQRHPFKPKLTHLDFQRVDATHKFQTKVPLHFIGEDI---VTKAGATVVHQL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ I+CLPK LP+FIE+++ K V S+H+SD+ P+GVS +
Sbjct: 130 TEVEITCLPKALPEFIEVDVSKFVVGDSVHISDLTFPKGVSSV 172
>gi|400286564|ref|ZP_10788596.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter
sp. PAMC 21119]
Length = 229
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 2/166 (1%)
Query: 9 KKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKV 68
+++G SR LRK VP IIYGGN++P IS+ N + +L+ E F S IL + + G
Sbjct: 16 EQQGKGASRRLRKQNLVPAIIYGGNEEPTSISIKINELVKSLEFEAFFSHILTINVDGVE 75
Query: 69 ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS 128
++++ Q H K +HADFQR+ +KIH+ VP+HF E +P + ++S ++S
Sbjct: 76 HQAVIKDLQRHPAKGFPMHADFQRIVKGQKIHMNVPVHFTGREDAPGTAA-AGVLSTLVS 134
Query: 129 DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
D+ I CLP LP+++E+++ ME+ LSDIKLP GV VIH E
Sbjct: 135 DIEIICLPSLLPEYLEVDVSGMEIGDLFRLSDIKLPEGV-VIHELE 179
>gi|359782578|ref|ZP_09285798.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
psychrotolerans L19]
gi|359369398|gb|EHK69969.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
psychrotolerans L19]
Length = 207
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ G VP +IYGG+K P I++ + L+ E ++S++ L++ G
Sbjct: 11 RSDLGKGASRRLRRNAGNVPAVIYGGDKAPTSITLVAKDLTKMLESEAAYASVITLKVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E VL++ Q H K V+HADF RV +K+ VPLHF+N E S VK I +
Sbjct: 71 SNESVLVKALQRHPSKGYVMHADFLRVVAGQKLTAHVPLHFMNQETSVGVKQQGGEILHT 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
I+++ +SCLPK+LP+FIE+++ K+E++ +HLSD+ +P GV ++
Sbjct: 131 INEVEVSCLPKDLPEFIEVDMAKVELDQIVHLSDLNVPAGVELV 174
>gi|410624789|ref|ZP_11335579.1| large subunit ribosomal protein L25 [Glaciecola mesophila KMM 241]
gi|410155635|dbj|GAC22348.1| large subunit ribosomal protein L25 [Glaciecola mesophila KMM 241]
Length = 213
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR KVP ++YG K+ V ++++HN ++ A + E F+S +L L + GK
Sbjct: 13 RTDLGKGASRRLRHEDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAFYSHVLTLNVDGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++++ Q H +K V H DF RVD ++ + VPLHF+N E + ++K + + +
Sbjct: 73 KVEAVIKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEEKAESIKTHGGHAEHHM 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAII 184
D+ ISCLP +LP+FIE+++ +E+ ++HLSDI LP GV+ + + ED +A +
Sbjct: 133 VDVEISCLPADLPEFIEVDVTNVELGQTLHLSDIVLPEGVTSVELAKGEDHDLAVVTV 190
>gi|71064751|ref|YP_263478.1| 50S ribosomal protein L25 [Psychrobacter arcticus 273-4]
gi|109893382|sp|Q4FVB4.1|RL25_PSYA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71037736|gb|AAZ18044.1| LSU ribosomal protein L25P [Psychrobacter arcticus 273-4]
Length = 224
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 100/166 (60%), Gaps = 1/166 (0%)
Query: 11 KGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL 70
+G SR LRK VP IIYGG + P+ IS+ N + +L+ E F S IL L + G+
Sbjct: 18 QGKGASRRLRKQNLVPAIIYGGGEQPIAISIKINELVKSLEFEAFFSHILTLNVDGEEHQ 77
Query: 71 VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDL 130
V++++ Q H K +HADFQRV +KI++ VP+HF E +P K I+S +++D+
Sbjct: 78 VVIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEAPGTKAGG-ILSTLVTDI 136
Query: 131 YISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
I C+P LP+++EI++ ME+ LSDIKLP GV + ED
Sbjct: 137 EIVCIPSQLPEYLEIDVSGMEIGDLFRLSDIKLPEGVIIFDLDMED 182
>gi|336316603|ref|ZP_08571496.1| ribosomal protein L25, Ctc-form [Rheinheimera sp. A13L]
gi|335879107|gb|EGM77013.1| ribosomal protein L25, Ctc-form [Rheinheimera sp. A13L]
Length = 200
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR KVP IIYGG+++ + I+++H+ + A E F++ IL + + G+
Sbjct: 13 RSDLGKGASRRLRHADKVPAIIYGGHQEALSITLDHSKLLQAQANEGFYTHILTIVVGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+++ Q H +K V+H DFQRV+ ++H VP+HFIN A ++++ I
Sbjct: 73 EVKTIVKAMQRHPFKPKVMHVDFQRVEAGHELHTVVPVHFIN---EAAATKKGGVVAHHI 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++L I+ LP+NLP+FIE++L +EV ++HLSDIK+P GV++
Sbjct: 130 NELAITVLPQNLPEFIEVDLADVEVGVTLHLSDIKVPAGVTI 171
>gi|109898884|ref|YP_662139.1| 50S ribosomal protein L25/general stress protein Ctc
[Pseudoalteromonas atlantica T6c]
gi|123360668|sp|Q15SQ3.1|RL25_PSEA6 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109701165|gb|ABG41085.1| LSU ribosomal protein L25P [Pseudoalteromonas atlantica T6c]
Length = 213
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR KVP ++YG K+ V ++++HN ++ A + E F+S +L L + GK
Sbjct: 13 RTDLGKGASRRLRHEDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAFYSHVLTLNVDGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++++ Q H +K V H DF RVD ++ + VPLHF+N + + ++K + + +
Sbjct: 73 KVEAVIKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEDKAESIKTHGGHAEHHM 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAII 184
D+ ISCLP +LP+FIE+++ +E+ ++HLSDI LP GV+ + + ED +A +
Sbjct: 133 VDVEISCLPADLPEFIEVDVTNVELGQTLHLSDIALPEGVTSVELAKGEDHDLAVVTV 190
>gi|352102010|ref|ZP_08959057.1| 50S ribosomal protein L25 [Halomonas sp. HAL1]
gi|350600181|gb|EHA16251.1| 50S ribosomal protein L25 [Halomonas sp. HAL1]
Length = 213
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ + VP ++YGG K IS+ Y A++ E+F SS++ L I G
Sbjct: 11 RSDLGKGASRRLRRANQQVPAVVYGGEKGAQSISVEKTAFYKAIEDESFFSSVIKLMIEG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K E V++R+ Q H +K L+ HADF RVD +I + VPLH E +K + +
Sbjct: 71 KEEQVVVRDLQRHPFKPLLTHADFLRVDATHEITMNVPLHVNGEEACVGIKDQGGELHVL 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTI 179
+++ ISCLPK+LP ++E+++ +E+ T++HLSD+ LP GV+ + H E D +
Sbjct: 131 ANEVAISCLPKDLPDYLEVDISALELGTTLHLSDLTLPAGVTSVDLSHGEEHDNAV 186
>gi|381153148|ref|ZP_09865017.1| ribosomal protein L25, Ctc-form [Methylomicrobium album BG8]
gi|380885120|gb|EIC30997.1| ribosomal protein L25, Ctc-form [Methylomicrobium album BG8]
Length = 200
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+ +A R + G + +R R+ G VP +IYGG+++P + +NHN + L+ E +S IL+
Sbjct: 6 EFVAQARGRSGKNAARGTRRQGNVPAVIYGGHQEPQMLVLNHNEVIKHLEHEAVYSHILD 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+ I GK E +L+ Q + K ++H DF RV + I V VPLHF+N S K
Sbjct: 66 VTIDGKTEKAVLKGVQRNPAKFQIMHLDFMRVSMSEAIKVHVPLHFVNESTSVGGK-KGG 124
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ ++ + D+ +SCLP LP+FIE++L +++ SIHLSD+ LP G+ ++
Sbjct: 125 VAAHSLVDVEVSCLPGALPEFIEVDLANLDIGASIHLSDLVLPAGIEIV 173
>gi|388457340|ref|ZP_10139635.1| 50S ribosomal protein L25/general stress protein Ctc [Fluoribacter
dumoffii Tex-KL]
Length = 221
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 109/167 (65%), Gaps = 4/167 (2%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR++ KVP +IYGG+K P+ I HN + AL+ E+ +SS+ ++
Sbjct: 8 AQTRTDMGKGASRRLRRLENKVPAVIYGGDKKPMSIHFQHNKVVKALETESIYSSVFDIT 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVK-VPLHFINSEISPAVKLNSCI 122
+ GKVE V+L+ Q H YK +V+H D QRV ++ I VK VP+HF N E +P +K I
Sbjct: 68 VDGKVEHVILKALQRHPYKPVVMHMDLQRV-SKTDILVKLVPIHFTNEEKAPGIKAGG-I 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
I++ ++ + + C K+LP+FI +++ ++++ +HLS++KLP+GV +
Sbjct: 126 INHTMTQVEVRCQAKDLPEFITVDMSDVKMDDVVHLSNLKLPKGVQL 172
>gi|359455490|ref|ZP_09244709.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20495]
gi|358047487|dbj|GAA80958.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20495]
Length = 235
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ + ++ H + A + E F++ IL L + G+
Sbjct: 45 RVETGTGASRRLRREDKVPAILYGADKEALSLTFAHKDMIKAQEDEGFYTHILTLNVDGE 104
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+L++ Q H +K + H DFQRVD K KVPLHFI +I V + + +
Sbjct: 105 AVEVILKDIQRHPFKPKLTHLDFQRVDATHKFQTKVPLHFIGEDI---VTKAGATVVHQL 161
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ I+CLPK LP+FIE+++ K V S+H+SD+ P+GVS +
Sbjct: 162 TEVEITCLPKALPEFIEVDVSKFVVGDSVHISDLTFPKGVSSV 204
>gi|372270582|ref|ZP_09506630.1| 50S ribosomal protein L25/general stress protein Ctc
[Marinobacterium stanieri S30]
Length = 196
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 111/184 (60%), Gaps = 5/184 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R +G SR LR+ G VPGIIYG + +P +S+ +Y L ++ F+SSIL L +
Sbjct: 8 AVDRNDQGKGASRRLRREGLVPGIIYG-SSEPKAVSVIARELYRMLLEDGFYSSILTLNL 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK E V++++ Q H K +VLHADFQR+D +KI ++VPL F+N E S A K +
Sbjct: 67 EGKEEKVIIKDLQRHPSKPVVLHADFQRIDDNQKIKLQVPLAFVNFEKSAASKAAAKFAQ 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPTIAT 181
S + I CLPK+LP+ +E++L K+E+ HLSDI LP GV ++ + D ++
Sbjct: 127 EA-STVEILCLPKDLPEVLEVDLSKIELGQIAHLSDITLPEGVEIVALRRGEDHDQSVGY 185
Query: 182 AIIP 185
P
Sbjct: 186 CYAP 189
>gi|110833378|ref|YP_692237.1| 50S ribosomal protein L25 [Alcanivorax borkumensis SK2]
gi|123050701|sp|Q0VS83.1|RL25_ALCBS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|110646489|emb|CAL15965.1| 50S ribosomal protein L25 [Alcanivorax borkumensis SK2]
Length = 214
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Query: 5 AFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR++ +VPGI+YGG +P IS+ + AL+ E F+S IL L+
Sbjct: 9 AESRSDTGKGASRRLRRLQERVPGILYGGEAEPQMISVELRELKKALENEAFYSHILTLK 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G +LR+ Q H K LH D RVD KI + VPLHF N E S VK I
Sbjct: 69 LDGADVQAVLRDMQRHPAKGHPLHVDLLRVDKTHKITMSVPLHFTNEESSIGVKKQGGEI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ +++ +SCLP++LP+FIE+++ E+++ +HLSD+KLP+GV +
Sbjct: 129 QHNFAEVEVSCLPQHLPEFIEVDMANAELDSVVHLSDLKLPKGVEL 174
>gi|452747681|ref|ZP_21947474.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri NF13]
gi|452008425|gb|EME00665.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri NF13]
Length = 205
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ VP +IYGG+K P IS+ + L+ E S +L++ + G
Sbjct: 11 RSDLGKGASRRLRRNAALVPAVIYGGDKAPQSISILAKDLAKLLENEASFSHVLSMNVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E VL++ Q H K VLHADF RV K+ VPLHFIN E S VK I +
Sbjct: 71 QTESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQETSVGVKQQGGEILHN 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLP++LP+FIE+++ K+EV +H++D+KLP+GV ++
Sbjct: 131 LNEVEVSCLPQDLPEFIEVDMAKVEVGQVLHMTDLKLPKGVELV 174
>gi|332306083|ref|YP_004433934.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola
sp. 4H-3-7+YE-5]
gi|410643509|ref|ZP_11354005.1| large subunit ribosomal protein L25 [Glaciecola chathamensis S18K6]
gi|410645146|ref|ZP_11355614.1| large subunit ribosomal protein L25 [Glaciecola agarilytica NO2]
gi|332173412|gb|AEE22666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola
sp. 4H-3-7+YE-5]
gi|410135379|dbj|GAC04013.1| large subunit ribosomal protein L25 [Glaciecola agarilytica NO2]
gi|410136919|dbj|GAC12192.1| large subunit ribosomal protein L25 [Glaciecola chathamensis S18K6]
Length = 213
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 107/178 (60%), Gaps = 1/178 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR KVP ++YG K+ V ++++HN ++ A + E F+S +L L + GK
Sbjct: 13 RTDLGKGASRRLRHEDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAFYSHVLTLNVDGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++++ Q H +K V H DF RVD ++ + VPLHF+N + + ++K + +
Sbjct: 73 KVEAVVKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEDKAESIKTLGGHAEHHM 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAII 184
D+ ISCLP +LP+FIE+++ +E+ ++HLSDI LP GV+ + + ED +A +
Sbjct: 133 VDVEISCLPNDLPEFIEVDVANVELGQTLHLSDIALPEGVTSVELAKGEDHDLAVVTV 190
>gi|339048435|ref|ZP_08647364.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC2047]
gi|330722355|gb|EGH00211.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC2047]
Length = 225
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR++ G +P I+YGG+K P I++ H I A E F + I++L
Sbjct: 9 AQARDVLGKGSSRRLRRLEGNIPAIVYGGDKAPQNITLAHKDIIKAADNEAFFAHIIDLN 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
I G E V++++ Q K +++H DF RV + I+V VPLHFIN + +KL ++
Sbjct: 69 IDGNGESVIVKDMQRPPAKPVIMHVDFLRVRKDVAINVSVPLHFINEDECKGIKLQGGVV 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
S+ ++++ ISCLP +LP+ I++++ +EV+ +HLSD+ LP+GV++
Sbjct: 129 SHNLTEVEISCLPGDLPESIDVDMANVEVDQIVHLSDLALPKGVTL 174
>gi|430376071|ref|ZP_19430474.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
macacae 0408225]
gi|429541302|gb|ELA09330.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
macacae 0408225]
Length = 242
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 111/185 (60%), Gaps = 6/185 (3%)
Query: 11 KGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG-KVE 69
+G SR LRK +VP IIYG +K+P+ +++ +N + +L+ E F S IL + + G E
Sbjct: 19 QGKGASRRLRKQNQVPAIIYGADKEPLAVALRYNELIKSLQTEAFFSHILTINVEGHGTE 78
Query: 70 LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISD 129
V++++ Q H K +HADFQR+ +++HV VP H+ ++++P K SN ++
Sbjct: 79 EVVIKDLQRHPAKNTPMHADFQRIVRGQEMHVTVPFHYEGADVAPGHKEGGIFTSNA-TE 137
Query: 130 LYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP---TIATAIIP- 185
+ ++C+P +P+FI++++ M++ SIHL D+ +P GV + E+ TIAT P
Sbjct: 138 IEVTCIPSKIPEFIKVDVSSMQIGDSIHLQDVTMPEGVVIRELQAENAVNRTIATMQAPT 197
Query: 186 VNTLE 190
V LE
Sbjct: 198 VEVLE 202
>gi|308050540|ref|YP_003914106.1| 50S ribosomal protein L25 [Ferrimonas balearica DSM 9799]
gi|307632730|gb|ADN77032.1| LSU ribosomal protein L25P [Ferrimonas balearica DSM 9799]
Length = 210
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 101/160 (63%), Gaps = 1/160 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ ++P ++YG ++ PV I+++HN + A + E F+S IL L I GK
Sbjct: 11 RTEIGTGASRRLRRAERLPAVLYGADEAPVAITLDHNKVNQAQELEAFYSQILILNIDGK 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+++ Q H YK +LH DFQRV + + VPLHFIN E S V+ ++ +++
Sbjct: 71 KVEAIVKAMQRHPYKPKLLHIDFQRVKRGEAMTATVPLHFINEEDSAGVRAGGTVM-HLV 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+++ I CLP++LP+ IE++ + ++HLSD+K P+GV
Sbjct: 130 NEVTIRCLPQDLPENIEVDTLNLNTGETLHLSDLKTPKGV 169
>gi|90022897|ref|YP_528724.1| 50S ribosomal protein L25/general stress protein Ctc
[Saccharophagus degradans 2-40]
gi|109893392|sp|Q21FL7.1|RL25_SACD2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|89952497|gb|ABD82512.1| LSU ribosomal protein L25P [Saccharophagus degradans 2-40]
Length = 210
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 5 AFERKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR+ G VP I+YGG K+P +++ + L+ E F+S I+ L
Sbjct: 10 AEARDVSGKGASRRLRREAGLVPAIVYGGRKNPQNVTITLRELTKHLENEAFYSHIITLN 69
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
I E V+L++ Q H +HADF RV KK + KVPLHFIN S VK +
Sbjct: 70 IGDSSEQVILKDLQRHPATNFAMHADFLRVSKTKKFNTKVPLHFINEATSKGVKEQGGKV 129
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ +++L I+CLP +LP+FIE++L +E+ +H+SDI LP+GV I
Sbjct: 130 QHSMTELEIACLPADLPEFIEVDLANVELGGIVHISDIVLPKGVESI 176
>gi|359447004|ref|ZP_09236631.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20439]
gi|358039141|dbj|GAA72880.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20439]
Length = 204
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ V ++ H + A + E F++ IL L + G+
Sbjct: 13 RVETGTGASRRLRREDKVPAILYGADKEAVSLTFAHKDMIKAQEDEGFYTHILTLNVGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H +K + H DFQRVD K+ KVPLHFI E KL + ++ +
Sbjct: 73 KVEAILKDIQRHPFKPKLTHLDFQRVDAAHKLVTKVPLHFIGEE--KVTKLGATVVHQ-L 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ ISCLPK+LP+FIE+++ + SIHL+D+ P+GV +
Sbjct: 130 TEVEISCLPKSLPEFIEVDVSDLVAGDSIHLTDLAFPKGVQSV 172
>gi|315127047|ref|YP_004069050.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. SM9913]
gi|315015561|gb|ADT68899.1| 50S ribosomal protein L25 [Pseudoalteromonas sp. SM9913]
Length = 204
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ V ++ H + A + E F++ IL L + G+
Sbjct: 13 RVETGTGASRRLRREDKVPAILYGADKEAVSLTFAHKDMIKAQEDEGFYTHILTLNVGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H +K + H DFQRVD K+ KVPLHFI E KL + ++ +
Sbjct: 73 KVEAILKDIQRHPFKPKLTHLDFQRVDATHKLVTKVPLHFIGEE--KVTKLGATVVHQ-L 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ ISCLPK+LP+FIE+++ + SIHL+D+ P+GV +
Sbjct: 130 TEVEISCLPKSLPEFIEVDVSDLVAGDSIHLTDLAFPKGVQSV 172
>gi|397688055|ref|YP_006525374.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri DSM 10701]
gi|395809611|gb|AFN79016.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri DSM 10701]
Length = 205
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A ER G SR LR+ VP +IYGG P IS+ + L+ E S+I+ L
Sbjct: 8 AQERSDLGKGASRRLRRNANLVPAVIYGGEAAPQSISILAKDLAKMLENEIAFSNIIKLS 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K VLHADFQRV +K+ VP+H IN E S VK I
Sbjct: 68 VDGKSQDVVIKALQRHPAKGFVLHADFQRVVAGQKLTATVPVHLINQETSIGVKQQGGEI 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ D ++CLP++LP FIE+++ KMEV +H+SD+KLP+GV+ +
Sbjct: 128 YLNLPDAEVTCLPQDLPDFIEVDIAKMEVGQVLHMSDLKLPKGVAFV 174
>gi|29655127|ref|NP_820819.1| 50S ribosomal protein L25 [Coxiella burnetii RSA 493]
gi|153206163|ref|ZP_01945426.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177']
gi|154705751|ref|YP_001423504.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii Dugway 5J108-111]
gi|161830242|ref|YP_001597664.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii RSA 331]
gi|165918238|ref|ZP_02218324.1| ribosomal protein L25, Ctc-form [Coxiella burnetii Q321]
gi|212211868|ref|YP_002302804.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii CbuG_Q212]
gi|212217813|ref|YP_002304600.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii CbuK_Q154]
gi|71153140|sp|Q83AP1.1|RL25_COXBU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042351|sp|A9KF12.1|RL25_COXBN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042352|sp|A9NAT6.1|RL25_COXBR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736301|sp|B6J9D8.1|RL25_COXB1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736302|sp|B6J329.1|RL25_COXB2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|29542396|gb|AAO91333.1| LSU ribosomal protein L25P [Coxiella burnetii RSA 493]
gi|120577293|gb|EAX33917.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177']
gi|154355037|gb|ABS76499.1| LSU ribosomal protein L25P [Coxiella burnetii Dugway 5J108-111]
gi|161762109|gb|ABX77751.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 331]
gi|165918098|gb|EDR36702.1| ribosomal protein L25, Ctc-form [Coxiella burnetii Q321]
gi|212010278|gb|ACJ17659.1| LSU ribosomal protein L25P [Coxiella burnetii CbuG_Q212]
gi|212012075|gb|ACJ19455.1| LSU ribosomal protein L25P [Coxiella burnetii CbuK_Q154]
Length = 244
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 117/188 (62%), Gaps = 4/188 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
++IA R+ G S +R +R+ KVPG +YG K P I++ + AL+ E+ SSI
Sbjct: 6 FELIAELREFTGKSAARRMRRFEDKVPGTVYGAGKAPQSITLLQKDLLKALESESTFSSI 65
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L L++ K + V+L+ Q H K ++H DFQR+ +K+ + VPLHF+ + P V+
Sbjct: 66 LTLKVGDKKQKVILKALQRHHTKPKIVHIDFQRIKASEKLIMNVPLHFLGEDDCPGVEAG 125
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE--DP 177
++S++ S++ I CLP +LP++IE++L ++++ S+HLS++KLP GV + + +E D
Sbjct: 126 G-VVSHLQSEVEIRCLPADLPEYIEVDLSHLQLDESVHLSNLKLPAGVGLTSAVDEEHDS 184
Query: 178 TIATAIIP 185
IA+ +P
Sbjct: 185 PIASVHMP 192
>gi|344941072|ref|ZP_08780360.1| 50S ribosomal protein L25 [Methylobacter tundripaludum SV96]
gi|344262264|gb|EGW22535.1| 50S ribosomal protein L25 [Methylobacter tundripaludum SV96]
Length = 199
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 4/183 (2%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+ +A R + G S +R R+ G VP +IYGG+ +P + +NHN + L E +S +L
Sbjct: 6 EFVAESRGQSGKSAARRARRAGNVPAVIYGGHGEPQMLLLNHNEVIKHLAHEAVYSHVLG 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+ I GK E V+L+ Q H K VLH DF RV + + V VPLHF+N + S K
Sbjct: 66 VNIDGKTERVVLKGVQRHPAKFQVLHMDFLRVTMSEALKVHVPLHFVNEQTSVGGK-KGG 124
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTEEDPT 178
I+++ + D+ +SCLP LP +IE++L +++ S HLSDI LP GV ++ +E D
Sbjct: 125 IVTHAMIDVEVSCLPAALPDYIEVDLGGLDIGESAHLSDIVLPAGVEIVALAQGSEHDHP 184
Query: 179 IAT 181
+A+
Sbjct: 185 VAS 187
>gi|386021940|ref|YP_005939965.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri DSM 4166]
gi|327481913|gb|AEA85223.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri DSM 4166]
Length = 205
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ VP +IYGG+K P IS+ + L+ E S +L++ + G
Sbjct: 11 RSDLGKGASRRLRRNAALVPAVIYGGDKAPQSISILAKDLAKLLENEASFSHVLSMNVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E VL++ Q H K VLHADF RV K+ VPLHFIN E S VK I +
Sbjct: 71 QTESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQETSVGVKQQGGEILHN 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLP++LP+FIE+++ +EV +H++DIKLP+GV ++
Sbjct: 131 LNEVEVSCLPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELV 174
>gi|93005015|ref|YP_579452.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter
cryohalolentis K5]
gi|109893383|sp|Q1QED5.1|RL25_PSYCK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|92392693|gb|ABE73968.1| LSU ribosomal protein L25P [Psychrobacter cryohalolentis K5]
Length = 224
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Query: 11 KGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL 70
+G SR LRK VP IIYGG + P IS+ N + +L+ E F S IL L + G+
Sbjct: 18 QGKGASRRLRKQNLVPAIIYGGGEQPTAISIKINELVKSLEFEAFFSHILTLNVDGEEHQ 77
Query: 71 VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDL 130
V++++ Q H K +HADFQRV +KI++ VP+HF E +P K ++S +++D+
Sbjct: 78 VVIKDLQRHPAKGFPMHADFQRVVKGQKINMNVPVHFSGREEAPGTKAGG-VLSTLVTDI 136
Query: 131 YISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
I C+P LP+++EI++ ME+ LSDI LP GV + ED
Sbjct: 137 EIVCIPSQLPEYLEIDVSGMEIGDLFRLSDITLPEGVVIAELELED 182
>gi|393762743|ref|ZP_10351369.1| large subunit 50S ribosomal protein L25 [Alishewanella agri BL06]
gi|392606365|gb|EIW89250.1| large subunit 50S ribosomal protein L25 [Alishewanella agri BL06]
Length = 201
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR KVP IIYGG++ + I+++H+ + A E F+S IL + + G+
Sbjct: 13 RSDLGKGASRRLRHADKVPAIIYGGHQPALSITLDHSKLLKAQSFEAFYSHILTINVGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+++ Q H +K VLH DFQRV+ ++H VP+HF+N + A ++ + +
Sbjct: 73 EVKAIVKAMQRHPFKPKVLHVDFQRVEAGHELHTTVPVHFLNED---AAGKKGGVVVHGL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST 173
+++ I+CLP++LP+FIE++L + V ++HLSDIK P+GV + T
Sbjct: 130 NEVEITCLPQDLPEFIEVDLADVAVGVTLHLSDIKAPKGVKFVQLT 175
>gi|418295016|ref|ZP_12906891.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379066374|gb|EHY79117.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 205
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ VP +IYGG+K P IS+ L+ E S +LNL + G
Sbjct: 11 RSDLGKGASRRLRRNAALVPAVIYGGDKAPQSISILAKDFAKLLENEASFSHVLNLNVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E VL++ Q H K VLHADF RV K+ VPLHFIN E S VK I +
Sbjct: 71 QNESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQESSVGVKQQGGEILHN 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLP++LP+FIE+++ +EV +H++DIKLP+GV ++
Sbjct: 131 LNEVEVSCLPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELV 174
>gi|359439403|ref|ZP_09229374.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20311]
gi|358025879|dbj|GAA65623.1| large subunit ribosomal protein L25 [Pseudoalteromonas sp.
BSi20311]
Length = 204
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ + ++ H + A + E F++ IL L + G+
Sbjct: 13 RVETGTGASRRLRREDKVPAILYGADKEALSLTFEHKDMIKAQEDEGFYTHILTLNVGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H +K + H DFQRVD K+ KVPLHFI + KL + ++ +
Sbjct: 73 KVEAILKDIQRHPFKPKLTHLDFQRVDATHKLVTKVPLHFIGED--KVTKLGATVVHQ-L 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ ISCLPK+LP+FIE+N+ + SIHL+D+ P+GV +
Sbjct: 130 TEVEISCLPKSLPEFIEVNVSDLVAGDSIHLTDLAFPKGVQSV 172
>gi|397169689|ref|ZP_10493120.1| 50S ribosomal protein L25/general stress protein Ctc [Alishewanella
aestuarii B11]
gi|396088677|gb|EJI86256.1| 50S ribosomal protein L25/general stress protein Ctc [Alishewanella
aestuarii B11]
Length = 200
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR +VP IIYGG+K + I+++H+ + A E F+S IL + + G+
Sbjct: 13 RNDLGKGASRRLRHADQVPAIIYGGHKPALSITLDHSKLLKAQSFEAFYSHILTISVGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+++ Q H +K +LH DFQRV+ ++H VP+HF+N + A ++ + +
Sbjct: 73 EVKAIVKAMQRHPFKPKILHVDFQRVEAGHELHTTVPVHFLNED---AAAKKGGVVVHGL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
+++ I+CLP++LP+FIE++L + V ++HLSDIK P+GV + T+
Sbjct: 130 NEVEITCLPQDLPEFIEVDLADVAVGVTLHLSDIKAPKGVKFVQLTK 176
>gi|339495315|ref|YP_004715608.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|338802687|gb|AEJ06519.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 205
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ VP +IYGG+K P IS+ + L+ E S +L+L + G
Sbjct: 11 RSDLGKGASRRLRRNAALVPAVIYGGDKAPQSISILAKDLAKLLENEASFSHVLSLNVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E VL++ Q H K VLHADF RV K+ VPLHFIN E S VK I +
Sbjct: 71 QNESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQETSVGVKQQGGEILHN 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLP++LP+FIE+++ +EV +H++DIKLP+GV ++
Sbjct: 131 LNEVEVSCLPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELV 174
>gi|424924887|ref|ZP_18348248.1| ribosomal protein L25 [Pseudomonas fluorescens R124]
gi|404306047|gb|EJZ60009.1| ribosomal protein L25 [Pseudomonas fluorescens R124]
Length = 200
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 5/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K + V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 KKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAIIP 185
++++ +SCLPK+LP+FIE++L E+ T +HLSD+K P+GV + + +D +A P
Sbjct: 128 VAEIEVSCLPKDLPEFIEVDLADAEIGTIVHLSDLKAPKGVEFVALAHGDDKAVANVHAP 187
Query: 186 VNTLESDNNSSIE 198
E+ + E
Sbjct: 188 RVAPEATEEGAAE 200
>gi|398969069|ref|ZP_10682682.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM30]
gi|398142763|gb|EJM31654.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM30]
Length = 200
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 5/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLAALVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K + V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 KKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAIIP 185
++++ +SCLPK+LP+FIE++L E+ T +HLSD+K P+GV + + +D +A P
Sbjct: 128 VAEIEVSCLPKDLPEFIEVDLANAEIGTIVHLSDLKAPKGVEFVALAHGDDKAVANVHAP 187
Query: 186 VNTLESDNNSSIE 198
E+ + E
Sbjct: 188 RVAPEATEEGAAE 200
>gi|410619673|ref|ZP_11330567.1| large subunit ribosomal protein L25 [Glaciecola polaris LMG 21857]
gi|410160805|dbj|GAC34705.1| large subunit ribosomal protein L25 [Glaciecola polaris LMG 21857]
Length = 213
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 107/178 (60%), Gaps = 1/178 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR KVP ++YG K+ V ++++HN ++ A + E F+S +L L + GK
Sbjct: 13 RTDLGKGASRRLRHNDKVPAVLYGLGKEAVSLTLSHNKVFQAQEFEAFYSHVLTLNVDGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++++ Q H +K V H DF RVD ++ + VPLHF+N + ++K + + +
Sbjct: 73 KVEAVIKDMQRHPFKPRVTHLDFLRVDAKQALQTNVPLHFVNEAKAESIKTHGGHAEHHM 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAII 184
D+ ISCLP +LP+FIE+++ +E+ ++HLSDI LP GV+ + + ED +A +
Sbjct: 133 VDVEISCLPADLPEFIEVDVINVELGQTLHLSDIVLPEGVTSVELAKGEDHDLAVVTV 190
>gi|421617607|ref|ZP_16058594.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri KOS6]
gi|409780387|gb|EKN60018.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri KOS6]
Length = 205
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ VP +IYGG+K P IS+ + L+ E S +LNL + G
Sbjct: 11 RSDLGKGASRRLRRNASLVPAVIYGGDKAPQSISILAKDLAKLLENEASFSHVLNLNVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E VL++ Q H K VLHADF RV K+ VPLHFIN E S VK I +
Sbjct: 71 QNESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQESSVGVKQQGGEILHN 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLP++LP+FIE+++ +EV +H++D+KLP+GV ++
Sbjct: 131 LNEVEVSCLPQDLPEFIEVDMANVEVGQVLHMTDLKLPKGVELV 174
>gi|375111020|ref|ZP_09757232.1| 50S ribosomal protein L25/general stress protein Ctc [Alishewanella
jeotgali KCTC 22429]
gi|374568850|gb|EHR40021.1| 50S ribosomal protein L25/general stress protein Ctc [Alishewanella
jeotgali KCTC 22429]
Length = 200
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR +VP IIYGG+K + I+++H + A E F+S IL + + G+
Sbjct: 13 RNDLGKGASRRLRHADQVPAIIYGGHKPALSITLDHAKLLKAQSFEAFYSHILTISVGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+++ Q H +K +LH DFQRV+ ++H VP+HF+N + A ++ + +
Sbjct: 73 EVKAIVKAMQRHPFKPKILHVDFQRVEAGHELHTTVPVHFLNED---AAAKKGGVVVHGL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
+++ I+CLP++LP+FIE++L + V ++HLSDIK P+GV + T+
Sbjct: 130 NEVEITCLPQDLPEFIEVDLADVAVGVTLHLSDIKAPKGVKFVQLTK 176
>gi|146283515|ref|YP_001173668.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri A1501]
gi|166223708|sp|A4VPC5.1|RL25_PSEU5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|145571720|gb|ABP80826.1| probable ribosomal protein L25 [Pseudomonas stutzeri A1501]
Length = 205
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ VP +IYGGN P IS+ L+ E S +LNL + G
Sbjct: 11 RSDLGKGASRRLRRNAALVPAVIYGGNNAPQSISILAKDFAKLLENEASFSHVLNLNVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E VL++ Q H K VLHADF RV K+ VPLHFIN E S VK I +
Sbjct: 71 QNESVLIKALQRHPAKGFVLHADFVRVVAGHKLTATVPLHFINQETSVGVKKQGGEILHN 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SC+P++LP+FIE+++ +EV +H++DIKLP+GV ++
Sbjct: 131 LNEVEVSCMPQDLPEFIEVDMANVEVGQVLHMTDIKLPKGVELV 174
>gi|392554286|ref|ZP_10301423.1| 50S ribosomal protein L25 [Pseudoalteromonas undina NCIMB 2128]
Length = 204
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR LR+ KVP I+YG +K+ + ++ H + A + E F++ IL L + G+
Sbjct: 13 RVETGTGASRRLRREDKVPAILYGADKEALSLTFEHKDMIKAQEDEGFYTHILTLNVGGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L++ Q H +K + H DFQRVD K+ KVPLHFI + KL + ++ +
Sbjct: 73 KVEAILKDIQRHPFKPKLTHLDFQRVDATHKLVTKVPLHFIGED--KVTKLGATVVHQ-L 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+++ ISCLPK+LP+FIE+++ + SIHL+D+ P+GV +
Sbjct: 130 TEVEISCLPKSLPEFIEVDVSDLVAGDSIHLTDLAFPKGVQSV 172
>gi|392420014|ref|YP_006456618.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri CCUG 29243]
gi|390982202|gb|AFM32195.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri CCUG 29243]
Length = 205
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ VP +IYGG+K P IS+ L+ E S +LNL + G
Sbjct: 11 RSDLGKGASRRLRRNAALVPAVIYGGDKAPQSISILAKDFAKLLENEASFSHVLNLNVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E VL++ Q H K VLHADF RV K+ VPLHFIN E S VK I +
Sbjct: 71 QNESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQESSVGVKQQGGEILHN 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLP++LP+FIE+++ +EV +H++DIKLP+GV ++
Sbjct: 131 LNEVEVSCLPQDLPEFIEVDMINVEVGQVLHMTDIKLPKGVELV 174
>gi|238020516|ref|ZP_04600942.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147]
gi|237867496|gb|EEP68502.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147]
Length = 190
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A R+ +GT SR LRK G VP ++YG + I+++H +++AL+KE+F + +L
Sbjct: 3 IQIQATVRETQGTGASRRLRKEGLVPAVVYGVG-EAQAIAVDHKQMFYALEKESFFTQLL 61
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L I GK + V++R++Q+H K+ V H DFQ V+ + + +++P+H +N+E S AVKL S
Sbjct: 62 KLNINGKEQDVIVRDYQMHPVKRQVQHIDFQAVNVNEPLRMRIPVHVVNAEKSKAVKLQS 121
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++ + + + + PKN+P IE++ E +E +HLSD+ P GV +
Sbjct: 122 GRVALLTTVVDVIVDPKNIPAAIELDCENVEAGDILHLSDLSFPEGVQSV 171
>gi|77460975|ref|YP_350482.1| 50S ribosomal protein L25 [Pseudomonas fluorescens Pf0-1]
gi|109893381|sp|Q3K6W3.1|RL25_PSEPF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77384978|gb|ABA76491.1| 50S ribosomal protein L25 [Pseudomonas fluorescens Pf0-1]
Length = 200
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 5/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRLAALVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHVIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAIIP 185
++++ +SCLPK+LP+FIE++L E+ T +HLSDIK P+GV + + +D +A P
Sbjct: 128 VAEIEVSCLPKDLPEFIEVDLANAEIGTIVHLSDIKAPKGVEFVALAHGDDKAVANVHAP 187
Query: 186 VNTLESDNNSSIE 198
E+ + E
Sbjct: 188 RVAPEATEEGAAE 200
>gi|423097289|ref|ZP_17085085.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens Q2-87]
gi|397886431|gb|EJL02914.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens Q2-87]
Length = 200
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAVVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAIIP 185
S++ +SCLPK+LP+FIE++L EV T IHLSD+K P+GV + + +D +A P
Sbjct: 128 TSEIEVSCLPKDLPEFIEVDLADAEVGTIIHLSDLKAPKGVEFVALAHGDDKAVANVHAP 187
Query: 186 VNTLESDNNSSIE 198
E+ + E
Sbjct: 188 RVAPEATEEGAAE 200
>gi|254284038|ref|ZP_04959006.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B]
gi|219680241|gb|EED36590.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B]
Length = 200
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 96/143 (67%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKL 84
+P ++YG +K+P I++ L+ ETF+++I+++++ G E V+L++ Q H K
Sbjct: 1 MPAVVYGTDKEPTSITLIRKDFEKMLEAETFYTAIIDIDVEGTHESVILKDLQRHPAKGF 60
Query: 85 VLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIE 144
+HADF R++ + ++ V +P+HF+N + VK+N +I +D+ +SCLP+N+P++IE
Sbjct: 61 PMHADFLRINADTELKVAIPIHFMNEDTCVGVKVNGGVIQRQETDIEVSCLPRNIPEYIE 120
Query: 145 INLEKMEVNTSIHLSDIKLPRGV 167
+++ +++ SIHL+D+ LP GV
Sbjct: 121 VDMAALDIGDSIHLTDVTLPEGV 143
>gi|431926267|ref|YP_007239301.1| 50S ribosomal protein L25 [Pseudomonas stutzeri RCH2]
gi|431824554|gb|AGA85671.1| LSU ribosomal protein L25P [Pseudomonas stutzeri RCH2]
Length = 205
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 1/164 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR+ VP +IYGG+K P IS+ L+ E S +LNL + G
Sbjct: 11 RSDLGKGASRRLRRNAALVPAVIYGGDKAPQSISILAKDFAKLLENEASFSHVLNLNVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E VL++ Q H K VLHADF RV K+ VPLHFIN E S VK I +
Sbjct: 71 QNESVLIKALQRHPAKSFVLHADFVRVVAGHKLTATVPLHFINQESSVGVKKQGGEILHN 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLP++LP+FIE+++ +EV +H++DIKLP+GV ++
Sbjct: 131 LNEVEVSCLPQDLPEFIEVDMINVEVGQVLHMTDIKLPKGVELV 174
>gi|70732481|ref|YP_262244.1| 50S ribosomal protein L25 [Pseudomonas protegens Pf-5]
gi|109893379|sp|Q4K689.1|RL25_PSEF5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68346780|gb|AAY94386.1| ribosomal protein L25, Ctc-form [Pseudomonas protegens Pf-5]
Length = 199
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
I+++ +SCLPK+LP+FIE++L E+ T +HLSDIK P+GV +
Sbjct: 128 IAEIEVSCLPKDLPEFIEVDLADAEIGTIVHLSDIKAPKGVEFV 171
>gi|254515307|ref|ZP_05127368.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3]
gi|219677550|gb|EED33915.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3]
Length = 220
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 1/168 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
+ I A R G SR LR+ + +P IIYG K+P +++ + +L+ E F S +
Sbjct: 5 LAIEATVRSDLGKGASRRLRRSVDHIPAIIYGAGKEPTPLTIIRKDLEKSLENEAFFSQV 64
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+++ + G V+ +L++ Q H + V+HADF RVD + I V VPLHFIN E VK+
Sbjct: 65 IDVNVDGDVQPAILKDLQRHPARNDVMHADFLRVDAKVAIKVSVPLHFINEEKCHGVKIE 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
II +++++L + CLP +P++IE+++E + +H+SD+KLP GV
Sbjct: 125 GGIIEHMLTELEVLCLPGLIPEYIEVDMENVTTADILHISDLKLPEGV 172
>gi|146328681|ref|YP_001208996.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A]
gi|172047325|sp|A5EWV0.1|RL25_DICNV RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146232151|gb|ABQ13129.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A]
Length = 225
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 117/202 (57%), Gaps = 7/202 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+++G SR LR+ G VP IIYGGN +P I++ + + K +F S I+NL+I G+
Sbjct: 15 REEQGKGASRRLRRQGLVPAIIYGGNTEPQAIAIKQDELKKNAKNHSFFSQIINLKIDGQ 74
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ +L+R+ Q H YK L H DFQR+ ++I V L F+ E +P +K + I+S
Sbjct: 75 EDQEILVRDVQHHIYKPLFQHFDFQRIVRGQEITATVLLEFVGEERAPGIKTDGGIVSRH 134
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++ + + C P LP++I ++L + + I L+D+KLP GV ++ E++ AT ++ +
Sbjct: 135 MTTVEVICRPSLLPEYIAVDLSEANIGDIITLADLKLPEGVRLVGDMEDEEFAATVVVQI 194
Query: 187 N------TLESDNNSSIEKEKN 202
+ +E + ++ ++E +
Sbjct: 195 SYPQREEQMEDTDTAAADEEGD 216
>gi|325265863|ref|ZP_08132549.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella
denitrificans ATCC 33394]
gi|324982501|gb|EGC18127.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kingella
denitrificans ATCC 33394]
Length = 190
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R +GT SR LR KVP ++YG + I+++H +Y AL+KE F + +L L
Sbjct: 6 IQATLRSAQGTGASRRLRNENKVPAVVYGLGESKA-IAVDHKEMYFALQKEAFFTQVLKL 64
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
I GK + V++R++Q+H K+ V H DFQ +D + + +K+P+H +N+E S AVKL S
Sbjct: 65 SIDGKEQDVIVRDYQMHPVKRQVTHIDFQAIDVNQPVRMKLPVHIVNAEKSHAVKLQSGR 124
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+S +++ + + PKN+P +E++ EK+ +HLSDI P GV I
Sbjct: 125 VSLLMTVVDVLVNPKNIPAALELDCEKVVAGDILHLSDITYPEGVQSI 172
>gi|419954313|ref|ZP_14470452.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri TS44]
gi|387968864|gb|EIK53150.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri TS44]
Length = 205
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A ER G SR LR+ VP +IYGG P IS+ + L+ E S+I+ L
Sbjct: 8 AQERSDLGKGASRRLRRNANLVPAVIYGGEAAPQSISILAKDLAKMLENEIAFSNIIKLN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K VLHADFQRV +K+ VP+H IN E S VK +
Sbjct: 68 VDGKGQNVVIKALQRHPAKGFVLHADFQRVVAGQKLIATVPVHLINQETSIGVKQQGGEV 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ D ++CLP++LP FIE+++ +MEV +H+SD+KLP+GV+ +
Sbjct: 128 YLNLPDAEVTCLPQDLPDFIEVDIAQMEVGQVLHMSDLKLPKGVAFV 174
>gi|398974417|ref|ZP_10685044.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM25]
gi|398141619|gb|EJM30535.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM25]
Length = 200
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 112/196 (57%), Gaps = 5/196 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR++ VP ++YGG+K P ISM + L+ E +S ++ L
Sbjct: 8 AEARSDLGKGASRRLRRLAALVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHVIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G + V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K I
Sbjct: 68 VGGTKQNVIIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFIN-EAAPVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATA 182
S+V++++ +SCLPK+LP+FIE++L E+ T +HLSD+K P+GV + + +D +A
Sbjct: 125 SHVVAEIEVSCLPKDLPEFIEVDLANAEIGTIVHLSDLKAPKGVEFVALAHGDDKAVANV 184
Query: 183 IIPVNTLESDNNSSIE 198
P E+ + E
Sbjct: 185 HAPRVAPEATEEGAAE 200
>gi|257455798|ref|ZP_05621024.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60]
gi|257446812|gb|EEV21829.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60]
Length = 241
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 107/180 (59%), Gaps = 5/180 (2%)
Query: 11 KGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK-VE 69
+G SR LRK VP I+YG +K+P I++ +N + +L+ E+F S IL + + G+ E
Sbjct: 18 QGKGASRRLRKQNLVPAIVYGADKEPASIAIRYNELIKSLETESFFSHILTINVEGQGTE 77
Query: 70 LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISD 129
V+++ Q H K +HADFQR+ + +H+ VP+H++ +E +P K +SN ++
Sbjct: 78 EVVIKALQRHPAKNTPMHADFQRIVRGQAMHITVPVHYVGAEDAPGHKAGGIFVSNA-TE 136
Query: 130 LYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP---TIATAIIPV 186
L I+ +P +P+++ +++ M V SIHL DI+LP GV++ +P T+AT P
Sbjct: 137 LEITAIPSKIPEYLTVDVSGMNVGDSIHLLDIQLPEGVAIRELEVTEPFNRTVATMQAPT 196
>gi|398842528|ref|ZP_10599707.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM102]
gi|398105625|gb|EJL95712.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM102]
Length = 199
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFIN-EAAPIKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+S++ +SCLPK+LP+FIE++L EV IHLSD+K P+GV +
Sbjct: 128 VSEIEVSCLPKDLPEFIEVDLADAEVGAIIHLSDLKAPKGVEFV 171
>gi|409393928|ref|ZP_11245199.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. Chol1]
gi|409394475|ref|ZP_11245672.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. Chol1]
gi|409120851|gb|EKM97183.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. Chol1]
gi|409121563|gb|EKM97645.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. Chol1]
Length = 205
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A ER G SR LR+ VP +IYGG P IS+ + L+ E S+I+ L
Sbjct: 8 AQERSDLGKGASRRLRRNANLVPAVIYGGEAAPQSISILAKDLAKMLENEIAFSNIIKLN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K VLHADFQRV +K+ VP+H +N E S VK I
Sbjct: 68 VDGKGQDVVIKALQRHPAKGFVLHADFQRVVAGQKLIATVPVHLVNQESSIGVKQQGGEI 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ D ++CLP++LP FIE+++ +MEV +H+SD+KLP+GV+ +
Sbjct: 128 YLNLPDAEVTCLPQDLPDFIEVDIAQMEVGQVLHMSDLKLPKGVAFV 174
>gi|398860961|ref|ZP_10616602.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM79]
gi|398233980|gb|EJN19876.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM79]
Length = 199
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIN-EAAPIKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+S++ +SCLPK+LP+FIE++L EV IHLSD+K P+GV +
Sbjct: 128 VSEIEVSCLPKDLPEFIEVDLADAEVGAIIHLSDLKAPKGVEFV 171
>gi|440739078|ref|ZP_20918600.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens BRIP34879]
gi|447915101|ref|YP_007395669.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
poae RE*1-1-14]
gi|440380450|gb|ELQ17017.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens BRIP34879]
gi|445198964|gb|AGE24173.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
poae RE*1-1-14]
Length = 203
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 4/192 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ + +S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHVIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K + V+++ Q H K VLHADF RV +K+ VP+HFI E +P K ++S+
Sbjct: 71 KKQNVIIKALQRHPSKGHVLHADFIRVVAGQKLTAIVPVHFIGEE-APVKK--GGVVSHT 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++L ++CLPK+LP+FIE++L E+ T IHLSD+K P+GV + D +
Sbjct: 128 TTELEVTCLPKDLPEFIEVDLSAAEIGTIIHLSDLKAPKGVEFVALAHNDDKAVANVHAP 187
Query: 187 NTLESDNNSSIE 198
+E D+ + E
Sbjct: 188 RVVEEDDAAEGE 199
>gi|388470876|ref|ZP_10145085.1| ribosomal protein L25, Ctc-form [Pseudomonas synxantha BG33R]
gi|388007573|gb|EIK68839.1| ribosomal protein L25, Ctc-form [Pseudomonas synxantha BG33R]
Length = 201
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ + +S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHVIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K + V+++ Q H K VLHADF RV +K+ VP+HF+ E +P K ++S+
Sbjct: 71 KKQNVIIKALQRHPSKGHVLHADFVRVVAGQKLTAIVPVHFVGEE-APVKK--GGVVSHT 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++L +SCLPK+LP+FIE++L E+ T IHLSD+K P+GV +
Sbjct: 128 TTELEVSCLPKDLPEFIEVDLSAAEIGTIIHLSDLKAPKGVEFV 171
>gi|398876009|ref|ZP_10631169.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM67]
gi|398882388|ref|ZP_10637356.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM60]
gi|398198930|gb|EJM85880.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM60]
gi|398205301|gb|EJM92085.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM67]
Length = 199
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +PA K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEE-APAKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ ++CLPK+LP+FIE++L E+ + IHLSD+K P+GV +
Sbjct: 128 VAEIEVTCLPKDLPEFIEVDLANAEIGSIIHLSDLKAPKGVEFV 171
>gi|398985051|ref|ZP_10690878.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM24]
gi|399013290|ref|ZP_10715600.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM16]
gi|398114229|gb|EJM04061.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM16]
gi|398154654|gb|EJM43120.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM24]
Length = 200
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 5/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLAALVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAIIP 185
++++ ++CLPK+LP+FIE++L E+ + IHLSD+K P+GV + + +D +A P
Sbjct: 128 VAEIEVTCLPKDLPEFIEVDLADAEIGSIIHLSDLKAPKGVEFVALAHGDDKAVANVHAP 187
Query: 186 VNTLESDNNSSIE 198
E+ + E
Sbjct: 188 RVAPEATEEGAAE 200
>gi|398923530|ref|ZP_10660750.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM48]
gi|398175146|gb|EJM62913.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM48]
Length = 199
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEE-APTKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLPK+LP+FIE++L E+ + IHLSD+K P+GV +
Sbjct: 128 VAEIEVSCLPKDLPEFIEVDLADAEIGSIIHLSDLKAPKGVEFV 171
>gi|330811725|ref|YP_004356187.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699280|ref|ZP_17673770.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens Q8r1-96]
gi|327379833|gb|AEA71183.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387996363|gb|EIK57693.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens Q8r1-96]
Length = 200
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L I G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNIGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HF+ E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFVG-EAAPIKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAIIP 185
+S++ ++CLPK+LP+FIE++L EV T IHLSD+K P+GV + + +D +A P
Sbjct: 128 VSEIEVTCLPKDLPEFIEVDLADAEVGTIIHLSDLKAPKGVEFVALAHGDDKAVANVHAP 187
Query: 186 VNTLESDNNSSIE 198
E+ + E
Sbjct: 188 RVAPEATEEGAAE 200
>gi|398914043|ref|ZP_10656767.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM49]
gi|398952335|ref|ZP_10674724.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM33]
gi|426411481|ref|YP_007031580.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. UW4]
gi|398155263|gb|EJM43713.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM33]
gi|398179252|gb|EJM66868.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM49]
gi|426269698|gb|AFY21775.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. UW4]
Length = 199
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 4/170 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEE-APTKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
++++ +SCLPK+LP+FIE++L E+ + IHLSD+K P+GV + D
Sbjct: 128 VAEIEVSCLPKDLPEFIEVDLANAEIGSIIHLSDLKAPKGVEFVALAHGD 177
>gi|410089581|ref|ZP_11286195.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
viridiflava UASWS0038]
gi|409763116|gb|EKN48101.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
viridiflava UASWS0038]
Length = 204
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 105/174 (60%), Gaps = 7/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ E S ++ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAFSHVIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + VL++ Q H K V+HADF RV +K+ VP+HFIN E +P K I
Sbjct: 68 VAGKKQNVLIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFINEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTE 174
S+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+GV + H T+
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178
>gi|345865808|ref|ZP_08817977.1| 50S ribosomal protein L25 [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345123074|gb|EGW52985.1| 50S ribosomal protein L25 [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 162
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Query: 39 ISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKK 98
IS+ HN + L E F+S ILNL++ E V+L++ Q H K ++H DFQR+ +K
Sbjct: 2 ISLAHNELILHLDHEAFYSHILNLKVGDATEQVVLKDLQRHPAKPFIMHIDFQRISAGEK 61
Query: 99 IHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHL 158
I ++VPLHF N E +P K S+++SD+ I+CLPK+LP+FIE+++ +M V +IHL
Sbjct: 62 IRMQVPLHFTNQETAPGTKAGGQ-ASHMLSDVEITCLPKDLPEFIEVDMGEMNVGDAIHL 120
Query: 159 SDIKLPRGVSVIHSTEED 176
S++KLP GV + S ED
Sbjct: 121 SELKLPAGVELPSSEHED 138
>gi|398942269|ref|ZP_10670207.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM41(2012)]
gi|398160821|gb|EJM49076.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM41(2012)]
Length = 200
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HF+ E +P K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFVGEE-APTKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAIIP 185
+S++ ++CLPK+LP+FIE++L EV + IHLSD+K P+GV + + +D +A P
Sbjct: 128 VSEIEVTCLPKDLPEFIEVDLANAEVGSIIHLSDLKAPKGVEFVALAHGDDKAVANVHAP 187
Query: 186 VNTLESDNNSSIE 198
E+ + E
Sbjct: 188 RVAPEATEEGAAE 200
>gi|378952828|ref|YP_005210316.1| 50S ribosomal protein L25 [Pseudomonas fluorescens F113]
gi|359762842|gb|AEV64921.1| LSU ribosomal protein L25p [Pseudomonas fluorescens F113]
Length = 200
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L I G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNIGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HF+ E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFVG-EAAPIKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAIIP 185
+S++ ++CLPK+LP+FIE++L EV T IHLSD+K P+GV + + +D +A P
Sbjct: 128 VSEIEVTCLPKDLPEFIEVDLANAEVGTIIHLSDLKAPKGVEFVALAHGDDKAVANVHAP 187
Query: 186 VNTLESDNNSSIE 198
E+ + E
Sbjct: 188 RVAPEATEEGAAE 200
>gi|398866175|ref|ZP_10621675.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM78]
gi|398241512|gb|EJN27162.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM78]
Length = 199
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEE-APTKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ ++ +SCLPK+LP+FIE++L E+ + IHLSD+K P+GV +
Sbjct: 128 VGEIEVSCLPKDLPEFIEVDLADAEIGSIIHLSDLKAPKGVEFV 171
>gi|402820621|ref|ZP_10870188.1| rplY protein [alpha proteobacterium IMCC14465]
gi|402511364|gb|EJW21626.1| rplY protein [alpha proteobacterium IMCC14465]
Length = 217
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 112/194 (57%), Gaps = 2/194 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+I A +R++ G +R LR IGK+P ++YG KDP I++ + I S+++
Sbjct: 5 FEINAEKRERDGKGPARALRNIGKIPAVLYGDKKDPESITVEQSDITKLYNSGRLMSTLI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ G + R+ QLH K +LHADF R+ KI V++ +HF+N E P +K +
Sbjct: 65 QIDVNGDKTRAIARDVQLHPVKDFILHADFLRLGKGAKIAVEIAVHFLNEETCPGLK-SG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V + ++C +P+FIE++L + + S+H+SD+KLP GV V ++ D TIA
Sbjct: 124 GVLNVVRYQVELNCPASEIPEFIELDLAEANIGDSLHISDVKLPEGV-VPTISDRDFTIA 182
Query: 181 TAIIPVNTLESDNN 194
T P +SD++
Sbjct: 183 TIAAPAELDDSDDD 196
>gi|398889383|ref|ZP_10643226.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM55]
gi|398189505|gb|EJM76779.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM55]
Length = 199
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 101/170 (59%), Gaps = 4/170 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEE-APTKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ ++ +SCLPK+LP+FIE++L E+ + IHLSD+K P+GV + D
Sbjct: 128 VGEIEVSCLPKDLPEFIEVDLANAEIGSIIHLSDLKAPKGVEFVALAHGD 177
>gi|383774298|ref|YP_005453365.1| 50S ribosomal protein L25 [Bradyrhizobium sp. S23321]
gi|381362423|dbj|BAL79253.1| 50S ribosomal protein L25 [Bradyrhizobium sp. S23321]
Length = 242
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ GKVPG+IYG + P+ IS++ + + F ++++++++
Sbjct: 10 ATARPKSGKGAARAERRAGKVPGVIYGNKQPPLPISVDDRELRQRILAGRFLTTLVDIDL 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V+ R++ L K +H DF R+ I + VPLH + SE SP VK +
Sbjct: 70 DGKKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSESSPGVKRGGAV-- 127
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+++ + + C +N+P+FIE+++ +E+ S+HLSDIKLP GV + T ED T+ T +
Sbjct: 128 NIVAHAIELECGVENIPQFIEVDVGTLEIGHSLHLSDIKLPAGVKAL--TAEDATLVTIV 185
Query: 184 IPVNTLE 190
P E
Sbjct: 186 PPSGYAE 192
>gi|319403819|emb|CBI77403.1| 50S ribosomal protein L25 [Bartonella rochalimae ATCC BAA-1498]
Length = 208
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 113/196 (57%), Gaps = 2/196 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ IS+ + I+H + F +++ +EI +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGDKQPPLAISVPYKDIFHKIHAGGFRTTVATIEIDQQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + +H DF R+ + +HV +P+HF+N +I+P +K +++ V
Sbjct: 72 KIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPGIK-RGGVLNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVN 187
++ + L +P+ IEI+L + SIH+S ++LP+GV + E D TIAT P N
Sbjct: 131 HEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVVPV-IQERDFTIATIAAPAN 189
Query: 188 TLESDNNSSIEKEKNN 203
SDN+S E +NN
Sbjct: 190 VSASDNSSEQENNENN 205
>gi|296113815|ref|YP_003627753.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4]
gi|416216089|ref|ZP_11623490.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 7169]
gi|416220560|ref|ZP_11625484.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 103P14B1]
gi|416233982|ref|ZP_11629580.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 12P80B1]
gi|416239551|ref|ZP_11632024.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC1]
gi|416243882|ref|ZP_11634147.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC7]
gi|416245591|ref|ZP_11634574.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC8]
gi|416249283|ref|ZP_11636459.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis CO72]
gi|416256221|ref|ZP_11639588.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis O35E]
gi|421780612|ref|ZP_16217100.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4]
gi|295921509|gb|ADG61860.1| 50S ribosomal protein L25 [Moraxella catarrhalis BBH18]
gi|326562159|gb|EGE12487.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 7169]
gi|326565659|gb|EGE15822.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 12P80B1]
gi|326566227|gb|EGE16379.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 103P14B1]
gi|326567120|gb|EGE17242.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC1]
gi|326568384|gb|EGE18464.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC7]
gi|326572285|gb|EGE22280.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC8]
gi|326574299|gb|EGE24246.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis O35E]
gi|326576207|gb|EGE26122.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis CO72]
gi|407812300|gb|EKF83086.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4]
Length = 223
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 4 IAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
+A ++G SR LRK VP IIYGGN + V I + N I AL E+F SS++ +
Sbjct: 9 VARAESQQGKGASRRLRKDNLVPAIIYGGNDEAVAICVKTNEIVKALSNESFFSSVITIN 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G V+++ Q H K LH DFQR+ + ++ VP++ IN E S K I+
Sbjct: 69 LDGAEHEVIIKALQRHPSKGFPLHIDFQRIVRGQTMNFNVPVNIIN-EDSSVGKKEGGIL 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED--PTIAT 181
+ +++D+ ++CLP+NLP+ IE+++ + + SIHLSD+ LP V+++ E D TIAT
Sbjct: 128 TILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVTLPNEVTLVTHDEADLNRTIAT 187
Query: 182 AIIPVNTLESDNNSSIEKEK 201
+ P +E+ +++ E+
Sbjct: 188 -MQPPAVIETADDAEASTEE 206
>gi|398869869|ref|ZP_10625226.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM74]
gi|398210281|gb|EJM96933.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM74]
Length = 199
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFINEE-APTKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLPK+LP+FIE++L E+ + IHLSD+K P+GV +
Sbjct: 128 VAEIEVSCLPKDLPEFIEVDLANAEIGSIIHLSDLKAPKGVEFV 171
>gi|395650296|ref|ZP_10438146.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 199
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM I L+ + +S I++L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEIAKLLENDAAYSHIISLNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HF+ E +P K +S+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFVGEE-APVKKGGE--VSHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ ++CLPK+LP+FIE++L ME+ IHLSDIK P+GV +
Sbjct: 128 VAEIEVTCLPKDLPEFIEVDLSAMEIGDIIHLSDIKAPKGVEFV 171
>gi|416156555|ref|ZP_11604594.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 101P30B1]
gi|416228010|ref|ZP_11627362.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 46P47B1]
gi|326564476|gb|EGE14702.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 46P47B1]
gi|326574883|gb|EGE24813.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 101P30B1]
Length = 223
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 4 IAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
+A ++G SR LRK VP IIYGGN + V I + N + AL E+F SS++ +
Sbjct: 9 VARAESQQGKGASRRLRKDNLVPAIIYGGNDEAVAICVKTNEVVKALSNESFFSSVITIN 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G V+++ Q H K LH DFQR+ + ++ VP++ IN E S K I+
Sbjct: 69 LDGAEHEVIIKALQRHPSKGFPLHIDFQRIVRGQTMNFNVPVNIIN-EDSSVGKKEGGIL 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED--PTIAT 181
+ +++D+ ++CLP+NLP+ IE+++ + + SIHLSD+ LP V+++ E D TIAT
Sbjct: 128 TILVNDIEVNCLPRNLPEAIEVDVANLAIGDSIHLSDVTLPNEVTLVTHDEADLNRTIAT 187
Query: 182 AIIPVNTLESDNNSSIEKEK 201
+ P +E+ +++ E+
Sbjct: 188 -MQPPAVIETADDAEASTEE 206
>gi|444921653|ref|ZP_21241488.1| 50S ribosomal protein L25 [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507380|gb|ELV07557.1| 50S ribosomal protein L25 [Wohlfahrtiimonas chitiniclastica SH04]
Length = 204
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G SR LR+ G +P ++YG ++ V I +NHN + E +SSI+ +EI GK
Sbjct: 11 RQDMGKGASRRLRREGLIPAVVYGAGQEAVSIVLNHNEALTVFRNEDVYSSIVTVEIDGK 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E +LR+ Q H YK L+ H DF RV +K+ VP+ +N+E + VK ++++ +
Sbjct: 71 PESAILRDVQRHPYKPLLAHLDFLRVKAGEKLKSMVPVVLLNAEDAAGVKAGG-VLTHAL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
+ + + CLPK+LP IEI++ + V I ++D+K P GV ++ E+
Sbjct: 130 TAIEVECLPKDLPHAIEIDIIDLAVGAHITVADVKAPAGVEILTPAED 177
>gi|237799721|ref|ZP_04588182.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022576|gb|EGI02633.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 204
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 107/174 (61%), Gaps = 7/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ + +S I+ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K VLHADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VGGKKQNVIIKALQRHPAKGHVLHADFVRVIAGQKLTAIVPIHFLNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG---VSVIHSTE 174
S+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+G V++ H T+
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178
>gi|213967230|ref|ZP_03395379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. tomato T1]
gi|301381034|ref|ZP_07229452.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tomato Max13]
gi|302060384|ref|ZP_07251925.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tomato K40]
gi|302134874|ref|ZP_07260864.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|213928072|gb|EEB61618.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. tomato T1]
Length = 203
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMPAKEVAKLLENEASYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HFI E +P K +S+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGEE-APIKKGGE--VSHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
S+L +SCLPK+LP+FIE+++ +E+ + +HLSD+K P+GV +
Sbjct: 128 TSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFV 171
>gi|398992795|ref|ZP_10695756.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM21]
gi|398136251|gb|EJM25343.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM21]
Length = 199
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ ++CLPK+LP+FIE++L EV + IHLSDI P+GV +
Sbjct: 128 VAEIEVTCLPKDLPEFIEVDLANAEVGSIIHLSDITAPKGVEFV 171
>gi|422587442|ref|ZP_16662113.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422654396|ref|ZP_16717139.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330873313|gb|EGH07462.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330967422|gb|EGH67682.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 203
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEASYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HFI E +P K +S+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGEE-APVKKGGE--VSHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
S+L +SCLPK+LP+FIE+++ +E+ + +HLSD+K P+GV +
Sbjct: 128 TSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFV 171
>gi|443645400|ref|ZP_21129250.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae B64]
gi|443285417|gb|ELS44422.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae B64]
Length = 204
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 107/174 (61%), Gaps = 7/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ + +S I+ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K V+HADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG---VSVIHSTE 174
S+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+G V++ H T+
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVDLSALEVGDNVHLSELKAPKGVEFVALAHGTD 178
>gi|416014617|ref|ZP_11562367.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. B076]
gi|320325684|gb|EFW81745.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. B076]
Length = 203
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 107/174 (61%), Gaps = 7/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ + +S I+ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G+ + V+++ Q H K V+HADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG---VSVIHSTE 174
S+ ++L ++CLPK+LP+FIE+NL +EV ++HLS++K P+G V++ H T+
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVNLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178
>gi|398904464|ref|ZP_10652307.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM50]
gi|398175843|gb|EJM63583.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM50]
Length = 199
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HF+ E +P K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFVG-EAAPIKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+S++ +SCLPK+LP+FIE++L EV IHLSD+K P+GV +
Sbjct: 128 VSEIEVSCLPKDLPEFIEVDLADAEVGAIIHLSDLKAPKGVEFV 171
>gi|399002454|ref|ZP_10705140.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM18]
gi|398124894|gb|EJM14390.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM18]
Length = 199
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HF+N E +P K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFVN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLPK+LP+FIE++L EV + IHLSDI P+GV +
Sbjct: 128 VAEIEVSCLPKDLPEFIEVDLANAEVGSIIHLSDINAPKGVEFV 171
>gi|289678416|ref|ZP_06499306.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae FF5]
gi|302186450|ref|ZP_07263123.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae 642]
gi|422619391|ref|ZP_16688081.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. japonica str. M301072]
gi|422631828|ref|ZP_16697008.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422675086|ref|ZP_16734434.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aceris str. M302273]
gi|424066156|ref|ZP_17803628.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424070802|ref|ZP_17808234.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|440720014|ref|ZP_20900435.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP34876]
gi|440726139|ref|ZP_20906396.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP34881]
gi|330899761|gb|EGH31180.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. japonica str. M301072]
gi|330941708|gb|EGH44465.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330972808|gb|EGH72874.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aceris str. M302273]
gi|407999885|gb|EKG40255.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408002588|gb|EKG42831.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440366736|gb|ELQ03813.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP34876]
gi|440367286|gb|ELQ04352.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP34881]
Length = 204
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ + +S I+ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K V+HADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTE 174
S+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+GV + H T+
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178
>gi|28868318|ref|NP_790937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. tomato str. DC3000]
gi|422659510|ref|ZP_16721935.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|71153160|sp|Q888C7.1|RL25_PSESM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|28851555|gb|AAO54632.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. tomato str. DC3000]
gi|331018128|gb|EGH98184.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 203
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEASYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HFI E +P K +S+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIGEE-APIKKGGE--VSHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
S+L +SCLPK+LP+FIE+++ +E+ + +HLSD+K P+GV +
Sbjct: 128 TSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEFV 171
>gi|66044196|ref|YP_234037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae B728a]
gi|75503328|sp|Q4ZXX3.1|RL25_PSEU2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|63254903|gb|AAY35999.1| LSU ribosomal protein L25P [Pseudomonas syringae pv. syringae
B728a]
Length = 204
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ + +S I+ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K V+HADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTE 174
S+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+GV + H T+
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVDLGSLEVGDNVHLSELKAPKGVEFVALAHGTD 178
>gi|407892573|ref|ZP_11151603.1| 50S ribosomal protein L25/general stress protein Ctc
[Diplorickettsia massiliensis 20B]
Length = 215
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
++ A RK GT SR LR++ ++P I+YG + P+ I+++HN + AL+ E F+S I
Sbjct: 5 FELTAQTRKAFGTRASRRLRRLENQIPAILYGAGEPPLAITLSHNQVLKALENEAFYSHI 64
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L + + G+ + +L++ Q HA+K +LH D RV ++KI + VPLHF ++P VK
Sbjct: 65 LTITVDGQAQKAVLKDLQRHAFKPRILHMDLLRVTAKEKITMSVPLHFKGENVAPGVKEA 124
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSI 156
+++++++ + + CLP LP++IE+++ ++ ++ +I
Sbjct: 125 GGVLAHLLNSVEVRCLPDALPEYIEVDVSRLGLDEAI 161
>gi|399008550|ref|ZP_10711020.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM17]
gi|425901499|ref|ZP_18878090.1| ribosomal protein L25, Ctc-form [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883453|gb|EJK99939.1| ribosomal protein L25, Ctc-form [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398115986|gb|EJM05757.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM17]
Length = 199
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAFSHVIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
I+++ +SCLPK+LP+FIE++L E+ T +HLS+IK P+GV +
Sbjct: 128 IAEIEVSCLPKDLPEFIEVDLGDAEIGTIVHLSNIKAPKGVEFV 171
>gi|422638715|ref|ZP_16702146.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae Cit 7]
gi|440744594|ref|ZP_20923897.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP39023]
gi|330951110|gb|EGH51370.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae Cit 7]
gi|440374012|gb|ELQ10755.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP39023]
Length = 204
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ + +S I+ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K V+HADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HSTE 174
S+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+GV + H T+
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVDLGTLEVGDNVHLSELKAPKGVEFVALAHGTD 178
>gi|220922771|ref|YP_002498073.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium nodulans ORS 2060]
gi|254801055|sp|B8IFN5.1|RL25_METNO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|219947378|gb|ACL57770.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium nodulans ORS 2060]
Length = 211
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R +R+ G+VP +IYGG + P IS++ N +H + F +++ +E+
Sbjct: 9 AVARDRVGKGAARAVRRQGRVPAVIYGGGQSPQSISLDANQTHHLIYGGGFLTTVFEIEV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ + R++QL K L LH DF RV + + V+VP+HF+N + +P +K S +++
Sbjct: 69 GGRKIRAIPRDYQLDPVKDLPLHVDFLRVTAGQTVAVEVPVHFVNQDAAPGLKQKSGMLN 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + + P +P I+++L ++ +IH+SD+ LP G S+ E T+AT +
Sbjct: 129 VVHHTVALEVSPDAIPDAIDVDLTGKDIGDTIHVSDLALPAGASLALDPSE--TVATLVP 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|121997779|ref|YP_001002566.1| 50S ribosomal protein L25/general stress protein Ctc
[Halorhodospira halophila SL1]
gi|166223688|sp|A1WVQ2.1|RL25_HALHL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|121589184|gb|ABM61764.1| LSU ribosomal protein L25P [Halorhodospira halophila SL1]
Length = 209
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 105/168 (62%), Gaps = 1/168 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M++ A R + G R LR+ +VPG++YG K+P +++ ++ +Y L++E F S+IL
Sbjct: 5 MRLDAHPRTETGRGAMRRLRRARRVPGVVYGAGKEPQPVALENDQLYRLLEEEAFFSTIL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ + E ++++ Q H +K LV H D QRV ++ I V VPLH E SP VK
Sbjct: 65 KVQMGSETEQAIVKDLQRHPFKPLVQHIDLQRVREDQPITVHVPLHVHGEEQSPGVKKGG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
+ +++ DL + CLPK+LP FI++++ ++V ++H+S++ LP GV
Sbjct: 125 VLHHDLL-DLEVVCLPKDLPPFIDVDVSSLKVGQAVHISELTLPEGVQ 171
>gi|407363828|ref|ZP_11110360.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
mandelii JR-1]
Length = 200
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HF+ E +P K +S+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFVGEE-APIKKGGE--VSHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+S++ ++CLPK+LP+FIE++L E+ + IHLSD+K P+GV +
Sbjct: 128 VSEIEVTCLPKDLPEFIEVDLANAEIGSIIHLSDLKAPKGVEFV 171
>gi|422648183|ref|ZP_16711307.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330961721|gb|EGH61981.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 203
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 103/167 (61%), Gaps = 4/167 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ + +S I+ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G+ + V+++ Q H K V+HADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFVNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
S+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+GV +
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFV 171
>gi|422665152|ref|ZP_16725024.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330975570|gb|EGH75636.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 204
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ + S I+ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAASSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K V+HADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VGGKKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG---VSVIHSTE 174
S+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+G V++ H T+
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178
>gi|404378084|ref|ZP_10983183.1| ribosomal protein L25, Ctc-form [Simonsiella muelleri ATCC 29453]
gi|294483948|gb|EFG31631.1| ribosomal protein L25, Ctc-form [Simonsiella muelleri ATCC 29453]
Length = 188
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 104/165 (63%), Gaps = 5/165 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R ++GT SR LR KVP ++YG + I+++H +++AL+KE+F + +L L I GK
Sbjct: 9 RSEQGTGASRRLRHDSKVPAVVYGLGETKA-ITVDHKEMFYALQKESFFTQVLKLNIDGK 67
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V++R++Q+H K+ V H DFQ +D + + +K+P+H N+EIS AVK+ + +S ++
Sbjct: 68 EQDVIVRDYQMHPVKRQVQHIDFQAIDINQPVRIKLPIHIKNAEISHAVKMQAGRVSLLV 127
Query: 128 SDLYISCL--PKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ + CL PKN+P +E++ K+ +HLSD P GV I
Sbjct: 128 T--VVDCLVDPKNIPAALELDCAKVVAGDILHLSDFVYPEGVQSI 170
>gi|71734821|ref|YP_273262.1| 50S ribosomal protein L25 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|257482001|ref|ZP_05636042.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289627924|ref|ZP_06460878.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289647281|ref|ZP_06478624.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aesculi str. 2250]
gi|416029130|ref|ZP_11572019.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406652|ref|ZP_16483676.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422584070|ref|ZP_16659185.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422598331|ref|ZP_16672594.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422679514|ref|ZP_16737787.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|109893378|sp|Q48MW0.1|RL25_PSE14 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71555374|gb|AAZ34585.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|298159701|gb|EFI00743.1| LSU ribosomal protein L25p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320327397|gb|EFW83411.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868892|gb|EGH03601.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330881888|gb|EGH16037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330988611|gb|EGH86714.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331008861|gb|EGH88917.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 203
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 107/174 (61%), Gaps = 7/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A +R G SR LR++ VP ++YGG+K P ISM + L+ + +S I+ L
Sbjct: 8 AEQRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G+ + V+++ Q H K V+HADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG---VSVIHSTE 174
S+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+G V++ H T+
Sbjct: 125 SHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGTD 178
>gi|389685987|ref|ZP_10177310.1| ribosomal protein L25, Ctc-form [Pseudomonas chlororaphis O6]
gi|388550329|gb|EIM13599.1| ribosomal protein L25, Ctc-form [Pseudomonas chlororaphis O6]
Length = 199
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 100/164 (60%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ E S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENEAAFSHVIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVVIKALQRHPAKGHVMHADFVRVVAGQKLTAIVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
I+++ +SCLPK+LP+FIE++L E+ T +HLS++K P+GV +
Sbjct: 128 IAEIEVSCLPKDLPEFIEVDLGDAEIGTIVHLSNLKAPKGVEFV 171
>gi|46201115|ref|ZP_00055742.2| COG1825: Ribosomal protein L25 (general stress protein Ctc)
[Magnetospirillum magnetotacticum MS-1]
Length = 202
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R G +R R+ GKVPG+IYG K + I M+ +++ + K F + +
Sbjct: 5 IAIAAELRDGSGKGAARATRRAGKVPGVIYGDKKAAICIQMDPRVVWAQISKTGFFTQLF 64
Query: 61 NLEIY--GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
N+++ GK L L R+ Q+H +H DF RV + IHVKVP+HF N SP +K
Sbjct: 65 NVDLGKDGK-HLCLARDVQMHPVSDQPIHVDFMRVSADHAIHVKVPVHFTNEAKSPGIKK 123
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
+++ + ++ I+C P+++P I I+L+ ME+ S+HL D+KLP G H T
Sbjct: 124 GG-VLNVELHEIEITCSPEDIPHEILIDLDGMEIGASVHLKDLKLPAGAKPYH-VASGAT 181
Query: 179 IATAIIP 185
+A+ P
Sbjct: 182 VASIAAP 188
>gi|258544625|ref|ZP_05704859.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Cardiobacterium hominis ATCC 15826]
gi|258520133|gb|EEV88992.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Cardiobacterium hominis ATCC 15826]
Length = 211
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 2/180 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R+ G SR LR+ G VP I+YGG + +++ + + + ++F+S I+ L++
Sbjct: 10 AIVRQDSGKGASRRLRREGLVPAIVYGGEGAALPVAVKQDDLVKFGRFDSFYSQIICLKV 69
Query: 65 YGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G+ ++ V++R+ Q H YK L H DFQRV +++ V LHF N + S VK I+
Sbjct: 70 EGQGDVEVIVRDVQRHLYKPLYQHMDFQRVVRGQELQATVSLHFTNEDTSVGVKAGG-IV 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+ ++ I CLP+NLP++IE+++ + + IHL D+KLP+GV ++H + + I
Sbjct: 129 EHHLNSAEIVCLPRNLPEYIEVDMANVALGDVIHLRDLKLPQGVRLLHDDDRAEAVVAQI 188
>gi|399154425|ref|ZP_10754492.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium SCGC AAA007-O20]
Length = 239
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R+ +G SR LRK KVP I+YGGNK P+ IS+N + I H L+ E +S+L+L +
Sbjct: 7 ALVREDQGKGASRRLRKEEKVPSIVYGGNKAPLMISLNIHEITHLLEDEDTFTSVLDLVV 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
E V++++ Q H K + H DF R+D + + PLHFI +E + A+++ + +
Sbjct: 67 DKSKEPVVIKDIQRHPAKNSIFHVDFLRIDEKHALITTTPLHFIGTEDNEAIRIGNMLNQ 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
V++ + ISCLPK+LP I++++ +E+ + L+D+ LP GV + ED
Sbjct: 127 FVVA-IEISCLPKDLPHGIDVDVSGLELGDHLTLTDLVLPEGVIITSLQHED 177
>gi|319406826|emb|CBI80459.1| 50S ribosomal protein L25 [Bartonella sp. 1-1C]
Length = 208
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 114/197 (57%), Gaps = 4/197 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ IS+ + I++ + F +++ +EI +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGDKQPPLAISVPYKDIFYKIHAGGFRTTVATIEIDQQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + +H DF R+ + +HV +P+HF+N +I+P +K +++ V
Sbjct: 72 KIQVLPKDYQLDPVRDFPIHVDFLRISAKSIVHVHIPVHFLNEDIAPGIK-RGGVLNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG-VSVIHSTEEDPTIATAIIPV 186
++ + L +P+ IEI+L + SIH+S ++LP+G V VI E D TIAT P
Sbjct: 131 HEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVVPVIQ--ERDFTIATIAAPA 188
Query: 187 NTLESDNNSSIEKEKNN 203
N SDN+S E +NN
Sbjct: 189 NVNASDNSSEQENNENN 205
>gi|407780097|ref|ZP_11127344.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor pacificus pht-3B]
gi|407298095|gb|EKF17240.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor pacificus pht-3B]
Length = 216
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R +R+ GK+P +IYG N+ P+ I++ + ++ + F ++I
Sbjct: 8 LKAEARERVGKGSA--RAIRRNGKIPAVIYGDNEAPLSITLPYKEVFLKIHAGGFKTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + ++H DF R+ + V VP+HFIN E SP +K
Sbjct: 66 TIEVDGKKIKVLPKDYQLDPVRDFLMHVDFLRIGKGTVVTVNVPVHFINDEASPGIK-RG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V D+ +C +P+FIE++L M++ S H+S +KLP GV+ T+ D TIA
Sbjct: 125 GVLNIVRHDVEFTCPATAIPEFIEVDLTGMDIGDSAHISAVKLPAGVTPT-ITDRDFTIA 183
Query: 181 TAIIPVN 187
T P
Sbjct: 184 TVAAPAG 190
>gi|395794819|ref|ZP_10474135.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. Ag1]
gi|421138182|ref|ZP_15598252.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens BBc6R8]
gi|323388152|gb|ADX60348.1| 50S ribosomal protein L25 noteral stress protein Ctc [Pseudomonas
fluorescens]
gi|395340980|gb|EJF72805.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. Ag1]
gi|404510605|gb|EKA24505.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens BBc6R8]
Length = 199
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 4/170 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM I L+ + +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEIAKLLENDAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HF+ E +P K +S+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFVGEE-APVKKGGE--VSHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
I+++ ++CLPK+LP+FIE++L +E+ +HLSD+K P+GV + D
Sbjct: 128 IAEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPKGVEFVALAHGD 177
>gi|312958844|ref|ZP_07773363.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6]
gi|311286614|gb|EFQ65176.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6]
Length = 199
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 102/170 (60%), Gaps = 4/170 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG+K P ISM + L+ + +S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMLAKEVAKLLENDAAYSHVIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K + V+++ Q H K VLHADF RV +K+ VP+HF+ E +P K IS+V
Sbjct: 71 KKQNVIIKALQRHPSKGHVLHADFVRVVAGQKLTAIVPVHFVGEE-APVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
++++ ++CLPK+LP+FIE++L +E+ +HLSD+K P+GV + D
Sbjct: 128 LNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPKGVEFVALAHGD 177
>gi|334144463|ref|YP_004537619.1| 50S ribosomal protein L25 [Thioalkalimicrobium cyclicum ALM1]
gi|333965374|gb|AEG32140.1| 50S ribosomal protein L25 [Thioalkalimicrobium cyclicum ALM1]
Length = 193
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G++PGIIYGG+KD V ++++ N + L +++IL +++ G
Sbjct: 10 RSTEGKGASRRLRHTGQIPGIIYGGDKDAVSVTLDANFVKKTLMNNDIYNTILTVDVEGA 69
Query: 68 V-ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V++++ Q H + V+H D QRV ++ +VP+ F+ S +P VKL +++
Sbjct: 70 SKESVVIKDMQRHPARADVMHIDLQRVTDNGRVVKRVPIKFVGSAKAPGVKLGG-LMTFF 128
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ + C KNLP IEI++ ME S+ LSD++LP+GV V+
Sbjct: 129 QKTVEVRCSAKNLPTAIEIDVSGMEAGESLRLSDLQLPKGVEVV 172
>gi|402702457|ref|ZP_10850436.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fragi A22]
Length = 196
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 98/164 (59%), Gaps = 4/164 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ E +S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEVAKLLENEAAYSHVIELTVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K V+HADF RV +K+ VP+HFI E +P K IS+V
Sbjct: 71 VKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPVHFIG-EAAPIKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++++ +SCLPK+LP+FIE++L EV + IHLSDI P+GV +
Sbjct: 128 VAEIEVSCLPKDLPEFIEVDLANAEVGSIIHLSDITAPKGVEFV 171
>gi|398850715|ref|ZP_10607413.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM80]
gi|398248176|gb|EJN33600.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM80]
Length = 199
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 101/170 (59%), Gaps = 4/170 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM + L+ + +S ++ L + G
Sbjct: 11 RSDLGKGASRRLRRLAALVPAVVYGGEKAPESISMLAKEVAKLLENDAAYSHVIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K + V+++ Q H K VLHADF RV +K+ VP+HF+ E +P K IS+V
Sbjct: 71 KKQNVIIKALQRHPSKGHVLHADFVRVVAGQKLTAIVPVHFVGEE-APTKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
++++ ++CLPK+LP+FIE++L +E+ +HLSD+K P+GV + D
Sbjct: 128 LNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPKGVEFVALAHGD 177
>gi|83313447|ref|YP_423711.1| ribosomal protein L25 [Magnetospirillum magneticum AMB-1]
gi|109893368|sp|Q2VZ23.1|RL25_MAGMM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|82948288|dbj|BAE53152.1| Ribosomal protein L25 [Magnetospirillum magneticum AMB-1]
Length = 202
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R G +R R+ GKVPG+IYG K + I M+ +++ + K F + +
Sbjct: 5 IAIAAELRDGSGKGAARATRRAGKVPGVIYGDKKAAICIQMDPRVVWAQISKTGFFTQLF 64
Query: 61 NLEIY--GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
N+++ GK L L R+ Q+H +H DF RV + IHVKVP+HF N SP +K
Sbjct: 65 NVDLGKDGK-HLCLARDVQMHPVTDQPIHVDFMRVSADHAIHVKVPVHFTNELKSPGIKK 123
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
+++ + ++ I+C P ++P I I+L+ +E+ SIHLSD+KLP G H T
Sbjct: 124 GG-VLNVELHEIEITCSPNDIPHEILIDLDGLEIGASIHLSDLKLPAGAKPYH-VASGAT 181
Query: 179 IATAIIP 185
+A+ P
Sbjct: 182 VASIAAP 188
>gi|326387510|ref|ZP_08209118.1| 50S ribosomal protein L25/general stress protein Ctc
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208014|gb|EGD58823.1| 50S ribosomal protein L25/general stress protein Ctc
[Novosphingobium nitrogenifigens DSM 19370]
Length = 202
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 101/181 (55%), Gaps = 2/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G+ P +IYG N++PV I + + AL F +SI+ L +
Sbjct: 9 AETRERVGKGASRVLRREGRTPAVIYGDNQEPVAIHVEEKALARALGTGHFFNSIVELTV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V L ++ H HADF R+ + +HVKVP+ FIN E SP +K +++
Sbjct: 69 GGTVVRTLPKDVAFHPVTDRPEHADFLRLAADHAVHVKVPVVFINEEASPGLK-KGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V +L + P ++P I +++ +EV SIHL DI +P GV V+ + E D TIAT +
Sbjct: 128 IVAHELELIATPDSIPDDITVDVTGLEVGASIHLKDIAIPAGVKVV-THEADATIATIVA 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|344923270|ref|ZP_08776731.1| 50S ribosomal protein L25 [Candidatus Odyssella thessalonicensis
L13]
Length = 198
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R+ GT +R R+ G VPG++YG NK+ IS++ I L K F S +
Sbjct: 5 VTIEAQPREALGTGGARATRRDGLVPGVVYGHNKENKFISIDPRSIAKELYKPGFFSRLF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + G E VL+++ QLH LH DF RV + KIHV +P+H IN + +P VK
Sbjct: 65 ALSVNGNTEHVLVKDVQLHPVSDAPLHIDFMRVSKDSKIHVNIPVHVINDDKAPGVK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V L + C ++P I ++L K++ ++HL+DI+LP GV H E D T+
Sbjct: 124 GMVNIVHHTLEVICPADSIPSEIVVDLAKIDAGQAVHLTDIQLPAGVVAAHP-ERDNTLV 182
Query: 181 TAIIPVNTLESDNNSS 196
+ + P T +SD S+
Sbjct: 183 SIVAPAGT-KSDEGSA 197
>gi|170740629|ref|YP_001769284.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium sp. 4-46]
gi|226736339|sp|B0UGY1.1|RL25_METS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|168194903|gb|ACA16850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium sp. 4-46]
Length = 217
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R +R+ G+VP +IYGG + P IS++ N +H + F S++ + +
Sbjct: 9 AVARDRVGKGAARAVRRQGRVPAVIYGGGQSPQSISLDANQTHHLIYGGGFLSTVFEIAV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ + R++QL K LH DF RV + + I V+VP+HF+N + +P +K S ++
Sbjct: 69 DGRTIRAIPRDYQLDPVKDTPLHVDFLRVVSGQTIEVEVPVHFVNQDAAPGLKQKSGTLN 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V+ + ++ P +P + ++L ++ ++H+SD+ LP G S+ + E T+AT +
Sbjct: 129 VVLHTITLAVSPDAIPDAVNVDLTGKDIGDTVHVSDLVLPTGASLALAPSE--TVATLVP 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|297717838|gb|ADI50062.1| LSU ribosomal protein L25p [Candidatus Odyssella thessalonicensis
L13]
Length = 197
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R+ GT +R R+ G VPG++YG NK+ IS++ I L K F S +
Sbjct: 5 VTIEAQPREALGTGGARATRRDGLVPGVVYGHNKENKFISIDPRSIAKELYKPGFFSRLF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + G E VL+++ QLH LH DF RV + KIHV +P+H IN + +P VK
Sbjct: 65 ALSVNGNTEHVLVKDVQLHPVSDAPLHIDFMRVSKDSKIHVNIPVHVINDDKAPGVK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V L + C ++P I ++L K++ ++HL+DI+LP GV H E D T+
Sbjct: 124 GMVNIVHHTLEVICPADSIPSEIVVDLAKIDAGQAVHLTDIQLPAGVVAAHP-ERDNTLV 182
Query: 181 TAIIPVNTLESDNNSS 196
+ + P T +SD S+
Sbjct: 183 SIVAPAGT-KSDEGSA 197
>gi|418940709|ref|ZP_13494063.1| 50S ribosomal protein L25 [Rhizobium sp. PDO1-076]
gi|375052533|gb|EHS48946.1| 50S ribosomal protein L25 [Rhizobium sp. PDO1-076]
Length = 199
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 114/189 (60%), Gaps = 5/189 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K +A ER KG+S R LR+ G +P +IYG + P+ IS+N N I + F ++I
Sbjct: 8 LKAVARERVGKGSS--RELRRNGSIPAVIYGDKQAPISISINTNEITKRIHAGGFMTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+EI G+ VL +++QL + +H DF RV ++ V+VP+HF+N + S AVK+ +
Sbjct: 66 VIEINGEKIKVLPKDYQLDPVRDFTMHIDFLRVSANSQVSVQVPVHFVNEDKS-AVKIGA 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V D+ + C N+P+FI ++L ++ SIH+S +KLP GV+ + + + D TIA
Sbjct: 125 -VLNIVRHDVELHCPADNIPEFITVDLSGAKIGDSIHISAVKLPAGVTPVIA-DRDFTIA 182
Query: 181 TAIIPVNTL 189
T + P +
Sbjct: 183 TLVAPAGGV 191
>gi|350564647|ref|ZP_08933464.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalimicrobium aerophilum AL3]
gi|349777666|gb|EGZ32029.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalimicrobium aerophilum AL3]
Length = 193
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +G SR LR G++PGIIYGG+KD V ++++ N + AL +++IL +++ G
Sbjct: 10 RSTEGKGASRRLRHTGQIPGIIYGGDKDAVSVTLDANFVKKALMNNDIYNTILTVDVEGA 69
Query: 68 V-ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V++++ Q H + V+H D QRV ++ +VP+ F + +P VKL +++
Sbjct: 70 SQENVVIKDMQRHPARADVMHIDLQRVTDNGRVVKRVPIKFAGAAKAPGVKLGG-LMTFF 128
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ I C KNLP IEI++ ME S+ LSD++LP GV V+
Sbjct: 129 QKTVEIRCSAKNLPTAIEIDVSTMEAGESLRLSDLQLPEGVEVV 172
>gi|404399176|ref|ZP_10990760.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fuscovaginae UPB0736]
Length = 197
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
Query: 8 RKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ +VP ++YGG+K P I++ I + E S ++ L + G
Sbjct: 11 RNDLGKGASRRLRRLASQVPAVVYGGDKAPESITILAKEIAKLFEDEAAFSHVIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K+ +LHADF RV KK+ VP+HFIN E +P K IS+V
Sbjct: 71 TKQNVIVKALQRHPAKQFILHADFVRVVAGKKLTATVPVHFIN-EAAPVKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH-STEEDPTIATAIIP 185
++++ +SC K+LP+FIE++L EV + IHLSD+K P+GV + + +D +A P
Sbjct: 128 VNEIEVSCEAKDLPEFIEVDLANAEVGSIIHLSDLKAPKGVEFVALAHGDDKAVANVHAP 187
Query: 186 VNTLESD 192
E D
Sbjct: 188 RVAPEED 194
>gi|395500688|ref|ZP_10432267.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. PAMC 25886]
Length = 199
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 99/170 (58%), Gaps = 4/170 (2%)
Query: 8 RKKKGTSFSRNLRKIGK-VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R G SR LR++ VP ++YGG K P ISM I L+ + +S I+ L + G
Sbjct: 11 RSDLGKGASRRLRRLASLVPAVVYGGEKAPESISMLAKEIAKLLENDAAYSHIIELNVGG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+++ Q H K VLHADF RV +K+ VP+HF+ E +P K IS+V
Sbjct: 71 TKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAVVPVHFVG-EAAPIKKGGE--ISHV 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
++++ ++CLPK+LP+FIE++L E+ IHLSD+K P+GV + D
Sbjct: 128 VAEIEVTCLPKDLPEFIEVDLSAAEIGDIIHLSDLKAPKGVEFVALAHGD 177
>gi|78484738|ref|YP_390663.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thiomicrospira crunogena XCL-2]
gi|109893402|sp|Q31IN4.1|RL25_THICR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|78363024|gb|ABB40989.1| LSU ribosomal protein L25P [Thiomicrospira crunogena XCL-2]
Length = 193
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKET-FHSSILNLEIYG 66
R ++G SR LR GKVP IIYGG+ D I++ N I ALK + ++S+L LE G
Sbjct: 10 RTEEGKGASRRLRHAGKVPAIIYGGDVDAKSIALKSNQIERALKLDVDLYNSVLTLEGAG 69
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E ++++ Q H + H DFQR + + +VPL F E SP VK+ ++S +
Sbjct: 70 DAENCIIKDLQRHPATGFITHIDFQRASDKAMVTKRVPLKFKGKESSPGVKMGG-LMSFM 128
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+ + +SCL K+LP I++++ ++E T++ LS + LP+GV + T + A++ +
Sbjct: 129 QTTVEVSCLAKDLPTAIDVDVSELEAGTNLRLSQLTLPKGVKLTALTHGNTDYDQAVVGI 188
Query: 187 N 187
+
Sbjct: 189 S 189
>gi|218682558|ref|ZP_03530159.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli CIAT 894]
Length = 201
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 112/198 (56%), Gaps = 5/198 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HFIN E SP +K+
Sbjct: 66 TIEVDGKKFKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPGIKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFNVDLNGKKIGDSIHISEVTLPKGVTTV--IDRDFTIA 182
Query: 181 TAIIPVNTLESDNNSSIE 198
T I P ++ E
Sbjct: 183 TIIAPAGGIDEAAEGGAE 200
>gi|167031780|ref|YP_001667011.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida GB-1]
gi|189042366|sp|B0KND5.1|RL25_PSEPG RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166858268|gb|ABY96675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
putida GB-1]
Length = 197
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGG+K+ +++ I + E +S ++ L +
Sbjct: 8 AQARTDLGKGASRRLRHAASIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAYSHVIELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K ++HADF RV +K+ KVP+HFI E +P K IS
Sbjct: 68 DGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFIGEE-APVKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+V+S++ +SC K+LP+FIE++L EV T IHLSD+K P+GV +
Sbjct: 125 HVVSEIEVSCEAKDLPEFIEVDLANAEVGTIIHLSDLKAPKGVEFV 170
>gi|68053213|sp|Q88PX7.2|RL25_PSEPK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
Length = 197
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGGN+D +++ I + E S +L L +
Sbjct: 8 AQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFSHVLELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K ++HADF RV +K+ KVP+HFIN E +P K IS
Sbjct: 68 DGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINEE-APVKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+V S++ +SC K+LP+FIE++L E+ T IHLSD+K P+GV +
Sbjct: 125 HVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFV 170
>gi|452963747|gb|EME68806.1| ribosomal protein L25 [Magnetospirillum sp. SO-1]
Length = 202
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R G +R R+ GKVPG+IYG K + I M+ +++ + K F + +
Sbjct: 5 IAIAAELRDGSGKGAARATRRAGKVPGVIYGDKKAAICIQMDPRVVWAQISKTGFFTQLF 64
Query: 61 NLEIY--GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
N+++ GK L L R+ Q+H +H DF RV + IHVKVP+HF N SP +K
Sbjct: 65 NVDLGKDGK-HLCLARDVQMHPVTDQPIHLDFMRVSADHAIHVKVPVHFANDTKSPGIKK 123
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
+++ + ++ I+C P ++P I I+L +E+ S+HLSD+KLP G H T
Sbjct: 124 GG-VLNVELHEIEITCSPNDIPHEILIDLSGLEIGDSVHLSDLKLPAGAKPYH-VAAGAT 181
Query: 179 IATAIIP 185
+A+ P
Sbjct: 182 VASIAAP 188
>gi|190892768|ref|YP_001979310.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli CIAT 652]
gi|190698047|gb|ACE92132.1| 50S ribosomal protein L25 [Rhizobium etli CIAT 652]
Length = 203
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 118/205 (57%), Gaps = 9/205 (4%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HFIN SP +K+
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F +I+L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPV--IDRDFTIA 182
Query: 181 TAIIPVNTLESDNNSSIEKEKNNNS 205
T + P +E S++E E + +
Sbjct: 183 TIVAPAAGVE----SAVEAEGDAEA 203
>gi|288958834|ref|YP_003449175.1| 50S ribosomal protein L25 [Azospirillum sp. B510]
gi|288911142|dbj|BAI72631.1| large subunit ribosomal protein L25 [Azospirillum sp. B510]
Length = 198
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 7 ERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
ER KGT+ R R+ G++P +IYGG + PV IS+ L + F + + ++ + G
Sbjct: 13 ERAGKGTA--RQTRRDGRIPAVIYGGKQAPVTISLEKFEFTRVLHQPGFFTHLFDVTVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
VL R+ Q H + LH DF RV ++ +I+V+VP+ F + E S +K +++ V
Sbjct: 71 TAHRVLPRDVQFHPVSDIPLHVDFLRVSSDTRINVQVPVEFADQEKSAGLKRGG-VLNIV 129
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+L +SC N+P+ I I+ E +V SIH+S +KLP GVS T+ D TIAT + P
Sbjct: 130 RHELELSCPADNIPEHITISCEGFDVGDSIHISAVKLPEGVSSA-ITDRDFTIATIVAP- 187
Query: 187 NTLESDNNSS 196
+ L+S+ ++
Sbjct: 188 SGLKSEEGAA 197
>gi|26987457|ref|NP_742882.1| 50S ribosomal protein L25 [Pseudomonas putida KT2440]
gi|24982120|gb|AAN66346.1|AE016263_3 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
putida KT2440]
Length = 217
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGGN+D +++ I + E S +L L +
Sbjct: 28 AQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFSHVLELNV 87
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K ++HADF RV +K+ KVP+HFIN E +P K IS
Sbjct: 88 DGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINEE-APVKKGGE--IS 144
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+V S++ +SC K+LP+FIE++L E+ T IHLSD+K P+GV +
Sbjct: 145 HVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFV 190
>gi|229588277|ref|YP_002870396.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens SBW25]
gi|259646693|sp|C3KCS0.1|RL25_PSEFS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|229360143|emb|CAY47000.1| putative ribosomal protein L25p family [Pseudomonas fluorescens
SBW25]
Length = 200
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGGNK +++ I + E +S ++ L +
Sbjct: 8 AQARTDLGKGASRRLRHAANIPAVVYGGNKPAESVTILSKEIAKLFENEAAYSHVIELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K+ ++HADF RV +K+ VP+HF+ E +P K ++S
Sbjct: 68 DGTKQNVIVKAMQRHPSKQFIMHADFVRVVAGQKLTAIVPVHFVG-EDAPVKK--GGVVS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ ++L ++CLPK+LP+FIE++L E+ T IHLSD+K P+GV +
Sbjct: 125 HTATELEVTCLPKDLPEFIEVDLSAAEIGTIIHLSDLKAPKGVEFV 170
>gi|339485705|ref|YP_004700233.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida S16]
gi|431800778|ref|YP_007227681.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida HB3267]
gi|338836548|gb|AEJ11353.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida S16]
gi|430791543|gb|AGA71738.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida HB3267]
Length = 197
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGGN+D +++ I + E S +L L +
Sbjct: 8 AQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFSHVLELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K ++HADF RV +K+ KVP+HFIN E +P K IS
Sbjct: 68 DGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINEE-APVKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+V +++ +SC K+LP+FIE++L E+ T IHLSD+K P+GV +
Sbjct: 125 HVEAEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFV 170
>gi|431805518|ref|YP_007232419.1| 50S ribosomal protein L25 [Liberibacter crescens BT-1]
gi|430799493|gb|AGA64164.1| LSU ribosomal protein L25p [Liberibacter crescens BT-1]
Length = 200
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G SR LR+ +P +IYG K P IS++ I L F ++IL + I
Sbjct: 11 AKHRGKVGKGSSRELRRKNLIPAVIYGDKKPPTSISLSTREIVKRLNNGGFMTTILTVNI 70
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G LVL +++QL+ ++H DF R+ K+ V+VP+HFIN + SP +K S I++
Sbjct: 71 EGNKVLVLPKSYQLNPVTDSIIHVDFLRISENSKVSVQVPIHFINEDKSPGIK-QSGILN 129
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V ++ + C N+P FI ++L ++++ +IH+SDI+LP VS + ++++ TIAT +
Sbjct: 130 IVCHEIELRCPTNNIPNFITVDLSSLKISDNIHISDIELPNDVSPV--SQDNFTIATIVA 187
Query: 185 PVN 187
P +
Sbjct: 188 PTS 190
>gi|429335290|ref|ZP_19215927.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida CSV86]
gi|428760092|gb|EKX82369.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida CSV86]
Length = 197
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGGNKD +++ I + E S ++ L +
Sbjct: 8 AQARTDLGKGASRRLRHAASIPAVVYGGNKDAESVTILAKEIAKLFENEAAFSHVIELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK + V+++ Q H K+ ++HADF RV +K+ VP+HFIN E +P K IS
Sbjct: 68 DGKKQNVIVKAMQRHPAKQYIMHADFVRVVAGQKLTAVVPVHFINEE-APVKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ ++++ +SC K+LP+FIE++L E+ T +HLSD+K P+GV +
Sbjct: 125 HTLNEIEVSCEAKDLPEFIEVDLANAEIGTIVHLSDLKAPKGVEFV 170
>gi|104780084|ref|YP_606582.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
entomophila L48]
gi|166223705|sp|Q1IEY7.1|RL25_PSEE4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|95109071|emb|CAK13767.1| 50S ribosomal subunit protein L25 (General stress protein CTC)
[Pseudomonas entomophila L48]
Length = 198
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGG+K+ +++ I + E S ++ L +
Sbjct: 8 AQARTDLGKGASRRLRHSANIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHVIELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K ++HADF RV +K+ KVP+HF+ E +P K IS
Sbjct: 68 DGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFVGEE-APIKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+V+S++ +SC K+LP+FIE++L K EV T IHLSD+K P+GV +
Sbjct: 125 HVVSEIEVSCEAKDLPEFIEVDLSKAEVGTIIHLSDLKAPKGVEFV 170
>gi|408483927|ref|ZP_11190146.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. R81]
Length = 198
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGGNK +++ I + E +S ++ L +
Sbjct: 8 AQARTDLGKGASRRLRHAANIPAVVYGGNKPAESVTILAKEIAKLFENEAAYSHVIELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K+ ++HADF RV +K+ VP+HF+ E +P K IS
Sbjct: 68 DGAKQNVIVKAMQRHPSKQFIMHADFVRVVAGQKLTAIVPVHFVGEE-APVKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+V++++ ++CLPK+LP+FIE++L +EV +HLSD+K P+GV +
Sbjct: 125 HVLNEIEVTCLPKDLPEFIEVDLSALEVGAIVHLSDLKAPKGVEFV 170
>gi|388547174|ref|ZP_10150442.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. M47T1]
gi|388274749|gb|EIK94343.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. M47T1]
Length = 198
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 102/167 (61%), Gaps = 4/167 (2%)
Query: 5 AFERKKKGTSFSRNLRKIG-KVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R G SR LR++ +VP +IYGG+K+ +S+ I + E +S I+ L
Sbjct: 8 AQARTDLGKGASRRLRRLAAQVPAVIYGGDKEAESVSILAKEIAKLFENEAAYSHIIELN 67
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ GK + V+++ Q H K+ ++HADF RV +K+ VP+HF+N E +P K I
Sbjct: 68 VDGKKQNVVVKAMQRHPAKQFIMHADFVRVVAGQKLTAIVPVHFVNEE-APVKKGGE--I 124
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
S+V++++ +SC K+LP+FIE++L E+ + +HLSD+K P+GV +
Sbjct: 125 SHVVNEIEVSCEAKDLPEFIEVDLANAEIGSIVHLSDLKAPKGVEFV 171
>gi|374292402|ref|YP_005039437.1| 50S ribosomal protein L25 [Azospirillum lipoferum 4B]
gi|357424341|emb|CBS87208.1| 50S ribosomal protein L25 [Azospirillum lipoferum 4B]
Length = 198
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 108/190 (56%), Gaps = 5/190 (2%)
Query: 7 ERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
ER KGT+ R R+ G++P +IYGG + P+ IS+ L + F + + + + G
Sbjct: 13 ERAGKGTA--RQTRRDGRIPAVIYGGKQAPLTISLEKFEFTRVLHQPGFFTHLFEVTVDG 70
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
VL R+ Q H + LH DF RV + + +V+VP+ F++ E S +K +++ V
Sbjct: 71 TAHRVLPRDVQFHPVTDVPLHVDFLRVSADTRTNVQVPVEFVDQEKSAGLKRGG-VLNIV 129
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+L +SC ++P+ I I+ E +V SIH+S +KLP GV+ T+ D TIAT + P
Sbjct: 130 RHELELSCPADSIPEHITISCEGFDVGDSIHISSVKLPEGVTST-ITDRDFTIATIVAP- 187
Query: 187 NTLESDNNSS 196
+ L+SD N++
Sbjct: 188 SGLKSDENAA 197
>gi|387891951|ref|YP_006322248.1| 50S ribosomal protein L25 [Pseudomonas fluorescens A506]
gi|423689820|ref|ZP_17664340.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens SS101]
gi|387161523|gb|AFJ56722.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens A506]
gi|388002328|gb|EIK63657.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens SS101]
Length = 199
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 3/172 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGGNK +++ I + E +S ++ L +
Sbjct: 8 AQARTDLGKGASRRLRHAANIPAVVYGGNKPAESVTILAKEIAKLFENEAAYSHVIELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K+ ++HADF RV +K+ VP+HF+ E +P K IS
Sbjct: 68 DGAKQNVIVKAMQRHPSKQFIMHADFVRVVAGQKLTAIVPVHFVGEE-APVKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+V++++ ++CLPK+LP+FIE++L +E+ +HLSD+K P+GV + D
Sbjct: 125 HVLNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSDLKAPKGVEFVALAHGD 176
>gi|83595075|ref|YP_428827.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum rubrum ATCC 11170]
gi|109893389|sp|Q2RMV5.1|RL25_RHORT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|83577989|gb|ABC24540.1| LSU ribosomal protein L25P [Rhodospirillum rubrum ATCC 11170]
Length = 210
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 101/179 (56%), Gaps = 3/179 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI-YG 66
R + G +R R+ G+VP +IYGG +DPV +S+ +I+ ++K F S + +L + G
Sbjct: 12 RDRAGKGAARATRREGQVPAVIYGGRQDPVLLSLAPRLIHTEMRKAGFSSRLFDLTVEGG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V++++ Q H + +H DF R+ + ++ V +P+HFIN SP +K +++ V
Sbjct: 72 ETHRVMVQDVQFHPVTDMPIHVDFLRIGKDTEVTVAIPVHFINETASPGLK-RGGVLNVV 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
++ + P LP F E++L EV SIH+ +K+P GV + + E D TI T P
Sbjct: 131 RHEIEVHGRPDALPDFFEVDLTGAEVGDSIHVGVVKIPEGVRPVIA-ERDFTICTIAAP 188
>gi|338737774|ref|YP_004674736.1| 50S ribosomal protein L25 [Hyphomicrobium sp. MC1]
gi|337758337|emb|CCB64162.1| 50S ribosomal protein L25 [Hyphomicrobium sp. MC1]
Length = 237
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 101/177 (57%), Gaps = 2/177 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R R+ G VP +IYG ++ P I++ +N ++ + + F S+ + +++
Sbjct: 9 ATARPRAGKGAARQARRNGNVPAVIYGNHETPETINLEYNELWKQVLRGHFTSTAIEIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G +VL R+ Q+ + LH DFQRV + I V +P+HF N +SP +K +++
Sbjct: 69 EGTKHIVLARDVQVDPVRDTPLHVDFQRVGKDGVIRVSIPVHFTNETLSPGLK-RGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
V D+ + C +P+ EINLE ME+ SIH+S +++P GVS + D TIAT
Sbjct: 128 IVRHDVEVFCPYDKIPRAFEINLEGMEIGRSIHISAVEMPEGVSPVIKN-RDFTIAT 183
>gi|87200131|ref|YP_497388.1| 50S ribosomal protein L25 [Novosphingobium aromaticivorans DSM
12444]
gi|109893374|sp|Q2G6G9.1|RL25_NOVAD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|87135812|gb|ABD26554.1| LSU ribosomal protein L25P [Novosphingobium aromaticivorans DSM
12444]
Length = 204
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 108/200 (54%), Gaps = 5/200 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G SR LR+ G+ P +IYGGN++PV I + + AL F +S++ L +
Sbjct: 9 AETRDRAGKGASRALRREGRTPAVIYGGNEEPVAIHLEEKALVKALGTGHFFNSVVELTV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ L ++ H HADF RV + +HV VP+ F N E SP +K +++
Sbjct: 69 GGQTVRTLPKDVAFHPVTDRPEHADFLRVSKDSVVHVNVPVIFANEEKSPGLK-KGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIATAI 183
V +L + C P +P I I++ EV SIH+S +KLP GV S I T+ D TIAT +
Sbjct: 128 IVRHELELVCAPDAIPDDIVIDVAGYEVGDSIHISAVKLPAGVKSAI--TDRDFTIATIV 185
Query: 184 IPVNTLESDNNSSIEKEKNN 203
P ++L+S+ + + +
Sbjct: 186 AP-SSLKSEEGDTTKTDAEG 204
>gi|241205729|ref|YP_002976825.1| 50S ribosomal protein L25 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859619|gb|ACS57286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 202
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 111/190 (58%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK VL +++QL + +H DF RV ++ V++P+HFIN E SP +K+
Sbjct: 66 TIDVDGKKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F I+L ++ SIH++++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIAEVTLPKGVTPV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 183 TIIAPAGGID 192
>gi|42520074|ref|NP_965989.1| 50S ribosomal protein L25 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|225629937|ref|YP_002726728.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp.
wRi]
gi|71153674|sp|Q73II9.1|RL25_WOLPM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801068|sp|C0R595.1|RL25_WOLWR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|42409811|gb|AAS13923.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|225591918|gb|ACN94937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp.
wRi]
Length = 203
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
Query: 13 TSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVL 72
T +LRK G +PGIIYG D V ++++ K + + ++ L I GK E L
Sbjct: 19 TKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGSLSAHLIELNISGKKEYAL 78
Query: 73 LRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYI 132
+R+ QLH K V H DFQ VD +I + +PL F+N +P +KL +++ + + +
Sbjct: 79 VRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPLSFVNESKAPGIKLGG-VLNVLCRSIAV 137
Query: 133 SCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
C P +P+ IE++L + SIH++D+KLP GV + EE+ TI T
Sbjct: 138 KCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVT 186
>gi|116253213|ref|YP_769051.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
leguminosarum bv. viciae 3841]
gi|424882645|ref|ZP_18306277.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WU95]
gi|115257861|emb|CAK08959.1| putative 50S ribosomal protein L25 [Rhizobium leguminosarum bv.
viciae 3841]
gi|392519008|gb|EIW43740.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 202
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 111/190 (58%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK VL +++QL + +H DF RV ++ V++P+HFIN E SP +K+
Sbjct: 66 TIDVDGKKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F I+L ++ SIH++++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIAEVTLPKGVTPV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 183 TIIAPAGGID 192
>gi|225677074|ref|ZP_03788079.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590896|gb|EEH12118.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 203
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
Query: 13 TSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVL 72
T +LRK G +PGIIYG D V ++++ K + + ++ L I GK E L
Sbjct: 19 TKAVHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGSLSAHLIELNISGKKEYAL 78
Query: 73 LRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYI 132
+R+ QLH K V H DFQ VD +I + +PL F+N +P +KL +++ + + +
Sbjct: 79 VRDIQLHVVKDTVQHVDFQFVDKGSEIKIDIPLSFVNESKAPGIKLGG-VLNVLCRSIAV 137
Query: 133 SCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
C P +P+ IE++L + SIH++D+KLP GV + EE+ TI T
Sbjct: 138 KCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVT 186
>gi|300024018|ref|YP_003756629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525839|gb|ADJ24308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Hyphomicrobium denitrificans ATCC 51888]
Length = 242
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R R+ G VP +IYG + P I++ +N ++ + + F S+ + L++
Sbjct: 9 ATARPRAGKGAARQARRDGNVPAVIYGNQETPETINLEYNELWKQVLRGHFTSTAIELDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G +VL R+ Q+ + LH DFQRV + I V +P+HF+N +SP +K +++
Sbjct: 69 EGTKHIVLARDVQVDPIRDTPLHVDFQRVGKDGVIRVSIPMHFVNETLSPGLK-RGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
V D+ + +P+F EINLE +E+ SIH+S + +P GV+ + D TIAT
Sbjct: 128 IVRHDVEVFAPYDKIPRFFEINLEGLEIGRSIHISAVNMPEGVTPV-IKNRDFTIAT 183
>gi|148554297|ref|YP_001261879.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
wittichii RW1]
gi|166223725|sp|A5V625.1|RL25_SPHWW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148499487|gb|ABQ67741.1| LSU ribosomal protein L25P [Sphingomonas wittichii RW1]
Length = 207
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R++ G SR +R+ G+VP +IYG ++P I + ++ L F +S++
Sbjct: 5 LDLSAEARERAGKGASRAIRREGRVPAVIYGEKQEPASIHVEEKVLMKLLHTGHFFNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L++ GK L ++ Q H LH DF R+ K++V VP+HF + E+SP +K
Sbjct: 65 MLDVGGKKVRTLPKDVQFHPVTDRPLHVDFLRIGEHTKVNVNVPVHFKDEELSPGLK-RG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ VI DL +S +P+ I I+L+ +EV SIHLS + LP+G S ED TIA
Sbjct: 124 GVLNVVIHDLGLSVDAAEIPEEIVISLKGLEVGESIHLSQVALPKGASA--QDHEDITIA 181
Query: 181 TAIIP 185
T + P
Sbjct: 182 TIVAP 186
>gi|406989085|gb|EKE08901.1| hypothetical protein ACD_16C00237G0002 [uncultured bacterium]
Length = 222
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+K G +R LR+ G VP ++YGG PV S+N + L K F S I + + GK
Sbjct: 12 REKIGRGAARALRREGCVPAVLYGGKDAPVHFSLNPIQLNKELHKTGFLSKIFEISLNGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E L R Q H L LH DF RV +KI V VP+HFIN SP +K +++ ++
Sbjct: 72 TERALARFVQFHPVTDLPLHVDFFRVTKGEKIAVSVPIHFINEAASPGLK-RGGVLNVIV 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+L + ++P IEI+L +E++ ++HL D+KLP V H+ E D +A + P
Sbjct: 131 HNLEVIADVDHIPTHIEIDLTGLEIHDTVHLKDLKLPESVMAAHA-ERDNDLANIVAP 187
>gi|402489060|ref|ZP_10835864.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
CCGE 510]
gi|401812007|gb|EJT04365.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
CCGE 510]
Length = 202
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 110/190 (57%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HFIN SP +K+
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEAKSPGIKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFNVDLNGKKIGDSIHISEVTLPKGVTPV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 183 TIIAPAGGID 192
>gi|408377521|ref|ZP_11175122.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
albertimagni AOL15]
gi|407748512|gb|EKF60027.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
albertimagni AOL15]
Length = 201
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 112/185 (60%), Gaps = 5/185 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K +A ER KG+S R LR+ G +P +IYG + P+ IS+N N I + F +++
Sbjct: 8 LKAVARERVGKGSS--RELRRNGLIPAVIYGDKQAPIAISINTNEITKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V+VP+HF+N E S A+K
Sbjct: 66 TIELDGKKISVLPKDYQLDRVRDFTMHVDFLRVSANSQVSVQVPVHFVNEEKS-AIK-TG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C ++P+ I ++L ++V +IH+S +KLP+GV+ + + + D TIA
Sbjct: 124 AVLNIVRHEVELHCPASDIPEAITVDLAGLKVGDAIHISAVKLPKGVTPVIA-DRDFTIA 182
Query: 181 TAIIP 185
T + P
Sbjct: 183 TIVAP 187
>gi|365898281|ref|ZP_09436247.1| 50S ribosomal protein L25 [Bradyrhizobium sp. STM 3843]
gi|365420969|emb|CCE08789.1| 50S ribosomal protein L25 [Bradyrhizobium sp. STM 3843]
Length = 233
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 6/162 (3%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKL 84
VPG+IYG N+ P+ IS+ + + F ++I ++ + GK V+ R+F L K
Sbjct: 29 VPGVIYGDNQPPLPISVEDRELRQRIGAGRFLTTIFDISLDGKKHRVIPRDFHLDPVKDF 88
Query: 85 VLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS-DLYISCLPKNLPKFI 143
LH DF R+ I V VPLH +N+E SP VK + N+++ L + CL +N+P++I
Sbjct: 89 PLHVDFMRLGQGATIRVSVPLHVVNAETSPGVKRGGTV--NIVTHTLELECLAENIPQYI 146
Query: 144 EINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
E ++ +E+N S+H+SD+KLP GV + D T+ T + P
Sbjct: 147 EADVGGLEINNSLHMSDVKLPTGVKPLRG---DATLVTIVPP 185
>gi|161619480|ref|YP_001593367.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
canis ATCC 23365]
gi|260565969|ref|ZP_05836439.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40]
gi|261755482|ref|ZP_05999191.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686]
gi|376275852|ref|YP_005116291.1| 50S ribosomal protein L25 [Brucella canis HSK A52141]
gi|189042347|sp|A9M6K0.1|RL25_BRUC2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161336291|gb|ABX62596.1| ribosomal protein L25, Ctc-form [Brucella canis ATCC 23365]
gi|260155487|gb|EEW90567.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40]
gi|261745235|gb|EEY33161.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686]
gi|363404419|gb|AEW14714.1| 50S ribosomal protein L25 [Brucella canis HSK A52141]
Length = 207
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 108/198 (54%), Gaps = 4/198 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR+ G++P +IYG ++P+ I++++ I++ + F +++ +E+ GK
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATIEVDGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + H DF RV + +HV VP+HF N E +P +K + NV+
Sbjct: 72 KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL--NVV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+P N +P+ +EI+L +E+ S+H+S +KLP+G + + D TIAT P
Sbjct: 130 RHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPA-IQDRDFTIATIAAPA 188
Query: 187 NTLESDNNSSIEKEKNNN 204
+N +E +
Sbjct: 189 GLKSEENAEGTAEEAKDG 206
>gi|405382024|ref|ZP_11035846.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF142]
gi|397321512|gb|EJJ25928.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF142]
Length = 203
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 112/190 (58%), Gaps = 4/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + PV I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGFIPAVIYGDKQAPVSIAINTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK VL +++QL + +H DF RV ++ V++P+HF+N E SP +K+
Sbjct: 66 TIDVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFVNEEKSPGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+S++ LP+GV+ + + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFTVDLSGHKIGDSIHISEVTLPKGVTPVIA-DRDFTIA 183
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 184 TIIAPAGGID 193
>gi|424871724|ref|ZP_18295386.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393167425|gb|EJC67472.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 202
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 111/190 (58%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK VL +++QL + +H DF RV ++ V++P+HFIN E SP +K+
Sbjct: 66 TIDVDGKKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSPGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F I+L ++ SIH++++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIAEVTLPKGVTPV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 183 TIIAPAAGID 192
>gi|319405260|emb|CBI78871.1| 50S ribosomal protein L25 [Bartonella sp. AR 15-3]
Length = 205
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 112/198 (56%), Gaps = 6/198 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ IS+ + I++ + F +++ +EI +
Sbjct: 12 REQVGKGSSRKLRRNGFIPAVIYGDKQPPLAISVPYKDIFYKIHAGGFRTTVATIEIDQQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + +H DF R+ + +HV +P+HF+N + +P +K I++ V
Sbjct: 72 KIQVLPKDYQLDPVRDFPIHVDFLRISAKSVVHVHIPVHFLNEDTAPGIK-RGGILNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVN 187
++ + L +P+ IEI+L + SIH+S ++LP+GV+ + E D TIAT P N
Sbjct: 131 HEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPV-IQERDFTIATIAAPAN 189
Query: 188 TLESDNNSSIEKEKNNNS 205
T D + +K NN+
Sbjct: 190 TSVGD----VPSDKENNA 203
>gi|433773544|ref|YP_007304011.1| ribosomal protein L25, Ctc-form [Mesorhizobium australicum WSM2073]
gi|433665559|gb|AGB44635.1| ribosomal protein L25, Ctc-form [Mesorhizobium australicum WSM2073]
Length = 213
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 105/177 (59%), Gaps = 2/177 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G +R +R+ GKVP +IYG + P+ I++ + IY+ + F ++I +++
Sbjct: 10 AEAREQVGKGSARAVRRNGKVPAVIYGDRQPPLAIALTYKDIYYKIHGGGFLTTIATIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL ++FQL K +H DF R+ + +++V VP+HFIN + SP +K +++
Sbjct: 70 DGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIK-RGGVLN 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
V ++ C +P+FI ++L ++ SIH+S +KLP GV + S + D TIAT
Sbjct: 129 IVRHEVEFHCPANAIPEFITVDLTGADIGDSIHISSVKLPAGVKPVIS-DRDFTIAT 184
>gi|417110749|ref|ZP_11963810.1| 50S ribosomal protein L25 [Rhizobium etli CNPAF512]
gi|327188360|gb|EGE55577.1| 50S ribosomal protein L25 [Rhizobium etli CNPAF512]
Length = 203
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 109/185 (58%), Gaps = 5/185 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HFIN SP +K+
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFINEAKSPGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F +I+L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPV--IDRDFTIA 182
Query: 181 TAIIP 185
T + P
Sbjct: 183 TIVAP 187
>gi|418054349|ref|ZP_12692405.1| 50S ribosomal protein L25 [Hyphomicrobium denitrificans 1NES1]
gi|353211974|gb|EHB77374.1| 50S ribosomal protein L25 [Hyphomicrobium denitrificans 1NES1]
Length = 243
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R R+ G VP +IYG ++ P I++ +N ++ + + F S+ + L++
Sbjct: 9 ATARPRAGKGAARQARRDGNVPAVIYGNHETPETINLEYNELWKQVLRGHFTSTAIELDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK +VL R+ Q+ + LH DFQRV + I V +P+HF++ +SP +K +++
Sbjct: 69 EGKKHIVLARDVQVDPIRDTPLHVDFQRVGKDGMIRVSIPVHFVHEALSPGLK-RGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
V D+ + LP+F E++LE +E+ SIH+S + LP GV+ + D TIAT
Sbjct: 128 IVRHDVEVLAPYDKLPRFFEVSLEGLEIGRSIHISAVHLPEGVTPV-IKNRDFTIAT 183
>gi|421591137|ref|ZP_16036042.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
Pop5]
gi|403703468|gb|EJZ19690.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
Pop5]
Length = 202
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 114/202 (56%), Gaps = 8/202 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + LH DF RV ++ V++P+HFIN + S +K+
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEDKSQGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHISEVTLPKGVTTV--IDRDFTIA 182
Query: 181 TAIIPVNTLESDNNSSIEKEKN 202
T I P + + S+ E E
Sbjct: 183 TIIAPAGGV---DESAAEGEAG 201
>gi|353328252|ref|ZP_08970579.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 203
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
+KKK + LR+ G +P +IYG D V ++++ K + ++ L+I GK
Sbjct: 17 KKKKAI---QALREKGSIPAVIYGKGHDNVNLTLSAKEFTKQYKSGALSAHLIELDISGK 73
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E L+R+ Q H K V H DFQ VD +I + +PL FIN SP +KL +++ +
Sbjct: 74 KEYALVRDIQWHVVKDTVQHVDFQFVDKGSEIKIDIPLSFINESKSPGIKLGG-VLNVLC 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+ + C P+ +P+ IEI+L + SIH++D+KLP GV + EE+ TI T
Sbjct: 133 RSITVKCSPEKIPQLIEIDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVT 186
>gi|398829009|ref|ZP_10587209.1| ribosomal protein L25, Ctc-form [Phyllobacterium sp. YR531]
gi|398217867|gb|EJN04384.1| ribosomal protein L25, Ctc-form [Phyllobacterium sp. YR531]
Length = 212
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 114/201 (56%), Gaps = 6/201 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R +R+ GKVP +IYG K P+ I++++ +Y+ + F ++I
Sbjct: 7 LKAEARERVGKGSA--REIRRNGKVPAVIYGDKKAPISITLDYKTLYYKIHGGGFKTTIA 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
N+ + GK VL +++QL +H DF RV + ++V VP+HF+N E+SP +K
Sbjct: 65 NIILDGKSIQVLPKDYQLDPVSDKPVHVDFLRVSAKSVVNVHVPIHFLNEELSPGIK-RG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
+++ V D+ + +P+ IEI+L + SIH+S + LP+GV SVI + D TI
Sbjct: 124 GVLNIVRHDVELHAPANAIPEAIEIDLTGKVIGDSIHISAVTLPKGVTSVIQ--DRDFTI 181
Query: 180 ATAIIPVNTLESDNNSSIEKE 200
AT P + D + + E
Sbjct: 182 ATIAAPAVLADEDETTEVAVE 202
>gi|152997607|ref|YP_001342442.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Marinomonas
sp. MWYL1]
gi|254801053|sp|A6W1C8.1|RL25_MARMS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|150838531|gb|ABR72507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinomonas
sp. MWYL1]
Length = 192
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 90/170 (52%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R ++G SR LR G VP +IYGG PV IS N + A+ F + ++
Sbjct: 3 LSINAVARTQEGKGASRRLRNEGLVPAVIYGGETAPVSISFKDNELLKAVGTPGFLTGLV 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ + GK E VL++ Q H V+H D QR +K I +VPL FIN+ S V
Sbjct: 63 EVTVEGKTEQVLVKALQRHPSTGAVMHMDLQRAQADKAITTRVPLSFINAAQSEGVSKQG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++ + CLP NLP+ + +++ K +++ HLSD+ LP GV ++
Sbjct: 123 GRLTVESKLAEVRCLPANLPEVLTVDVIKGQLDQIFHLSDVILPEGVELV 172
>gi|392380061|ref|YP_004987219.1| 50S ribosomal protein L25 [Azospirillum brasilense Sp245]
gi|356882428|emb|CCD03440.1| 50S ribosomal protein L25 [Azospirillum brasilense Sp245]
Length = 203
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 101/181 (55%), Gaps = 4/181 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R KGT+ R R+ G++P +IYGG + P+ IS+ L + F + + ++ +
Sbjct: 11 ARDRAGKGTA--RQTRRDGRIPAVIYGGKQAPIMISLEKFTFTRVLNQAGFFTHLFDVTV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G VL R+ Q H + LH DF RV E + V+VP+ F++ E SP +K +++
Sbjct: 69 DGATHRVLPRDVQFHPVTDVPLHVDFLRVSAETRTTVQVPVEFVDQEKSPGLK-RGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V +L ++ N+P+ I I+ E +V SIH+S +KLP GV+ T+ D TIAT +
Sbjct: 128 IVRHELDVTVSAGNIPEQITISCEGYDVGDSIHISSVKLPEGVAST-ITDRDFTIATIVA 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|218463175|ref|ZP_03503266.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli Kim 5]
Length = 202
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 110/190 (57%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGFIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HFIN E S +K+
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V + + C +P+F +I+L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHSVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTTV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T + P ++
Sbjct: 183 TIVAPAAGVD 192
>gi|255003661|ref|ZP_05278625.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. Puerto Rico]
gi|255004786|ref|ZP_05279587.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. Virginia]
Length = 217
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 4/206 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R K GT +R LR G +P ++YG N+D V IS++H + S ++
Sbjct: 7 IRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQLI 66
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L I GK E L + Q H V H DFQ VD +I V+VPL F+N + VKL
Sbjct: 67 KLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGG 126
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N++ L I C P +P+ +E++L + + SIH+SD+ LP + V EE+P I
Sbjct: 127 AL--NILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMK-EENPVI 183
Query: 180 ATAIIPVNTLESDNNSSIEKEKNNNS 205
A+ E+ + + E+ +
Sbjct: 184 ASVSATAAVEEAKEDGAPEESAQGQA 209
>gi|190571325|ref|YP_001975683.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213018721|ref|ZP_03334529.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|226694585|sp|B3CMB8.1|RL25_WOLPP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|190357597|emb|CAQ55038.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212995672|gb|EEB56312.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 203
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
+KKK + LR+ G +P +IYG D V ++++ K + ++ L+I GK
Sbjct: 17 KKKKAM---QALREKGSIPAVIYGKGHDNVNLTLSAKEFTKQYKSGALSAHLIELDISGK 73
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E L+R+ Q H K V H DFQ VD +I + +PL FIN SP +KL +++ +
Sbjct: 74 KEYALVRDIQWHVVKDTVQHVDFQFVDKGSEIKIDIPLSFINESKSPGIKLGG-VLNVLC 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+ + C P+ +P+ IEI+L + SIH++D+KLP GV + EE+ TI T
Sbjct: 133 RSITVKCSPEKIPQVIEIDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVT 186
>gi|209550344|ref|YP_002282261.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424918709|ref|ZP_18342073.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209536100|gb|ACI56035.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392854885|gb|EJB07406.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 202
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 110/190 (57%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPISIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HFIN E S +K+
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSANTQVTVEIPVHFINEEKSQGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHISEVTLPKGVTTV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 183 TIIAPAAGID 192
>gi|420243915|ref|ZP_14747776.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF080]
gi|398057374|gb|EJL49341.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF080]
Length = 201
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 114/198 (57%), Gaps = 4/198 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG+S R LR+ G +P +IYG + P+ I+++ N + + F ++I
Sbjct: 8 LKAEARERVGKGSS--RELRRNGFIPAVIYGDKQSPLAIALSTNEVTKRIHAGGFMTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G+ VL +++QL + +H DF RV ++ V+VP+HF+N E SP +K+
Sbjct: 66 TIEVNGEKIQVLPKDYQLDPVRDFTMHVDFLRVSGNTEVSVEVPVHFVNEEKSPGIKIGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C ++P+F+ ++L ++ S+H+S +KLP G + + + D TIA
Sbjct: 126 -VLNIVRHEVELLCPANDIPEFLTVDLTGAKIGDSLHISAVKLPAGARPVIA-DRDFTIA 183
Query: 181 TAIIPVNTLESDNNSSIE 198
T + P + + +S E
Sbjct: 184 TIVAPAAGVAEEEPASAE 201
>gi|56417306|ref|YP_154380.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. St. Maries]
gi|269958304|ref|YP_003328091.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel]
gi|68053041|sp|Q5P9A5.1|RL25_ANAMM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56388538|gb|AAV87125.1| 50S ribosomal protein L25 [Anaplasma marginale str. St. Maries]
gi|269848133|gb|ACZ48777.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel]
Length = 218
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R K GT +R LR G +P ++YG N+D V IS++H + S ++
Sbjct: 7 IRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQLI 66
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L I GK E L + Q H V H DFQ VD +I V+VPL F+N + VKL
Sbjct: 67 KLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGG 126
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N++ L I C P +P+ +E++L + + SIH+SD+ LP + V EE+P I
Sbjct: 127 AL--NILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMK-EENPVI 183
Query: 180 ATAIIPVNTLESDNNSSIEKEKNNNS 205
A+ E+ + + E+
Sbjct: 184 ASVSATAAVEEAKEDGAPEESAQGQG 209
>gi|338971774|ref|ZP_08627156.1| LSU ribosomal protein L25p [Bradyrhizobiaceae bacterium SG-6C]
gi|338235082|gb|EGP10190.1| LSU ribosomal protein L25p [Bradyrhizobiaceae bacterium SG-6C]
Length = 237
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 6/182 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VP +IYG N+ P+ IS++ A+ F ++I N+++
Sbjct: 9 ATARPKAGKGAARAERRAGRVPAVIYGDNQAPLTISLDDKSARQAIFAGHFLTTIFNIDL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI-I 123
GK V+ R+F L K LH DF R+ KI V VPLH +E+SP VK + I
Sbjct: 69 DGKKHRVIPRDFSLDPVKDFPLHVDFLRLGAGAKIRVSVPLHVTGAEVSPGVKRGGTVNI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N +L +++P+FIE+++ K+E+N S+HLSD++LP+GV + +D T+ T +
Sbjct: 129 VNHTVELEADV--EHIPQFIEVDVSKLEINNSVHLSDVQLPQGVKAL---RDDQTLVTVV 183
Query: 184 IP 185
P
Sbjct: 184 PP 185
>gi|414168517|ref|ZP_11424480.1| 50S ribosomal protein L25, partial [Afipia clevelandensis ATCC
49720]
gi|410887253|gb|EKS35063.1| 50S ribosomal protein L25, partial [Afipia clevelandensis ATCC
49720]
Length = 217
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 6/182 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VP +IYG N+ P+ IS++ A+ F ++I N+++
Sbjct: 9 ATARPKAGKGAARAERRAGRVPAVIYGDNQAPLTISLDDKSARQAIFAGHFLTTIFNIDL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI-I 123
GK V+ R+F L K LH DF R+ KI V VPLH +E+SP VK + I
Sbjct: 69 DGKKHRVIPRDFSLDPVKDFPLHVDFLRLGAGAKIRVSVPLHVTGAEVSPGVKRGGTVNI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N +L +++P+FIE+++ K+E+N S+HLSD++LP+GV + +D T+ T +
Sbjct: 129 VNHTVELEADV--EHIPQFIEVDVSKLEINNSVHLSDVQLPQGVKAL---RDDQTLVTVV 183
Query: 184 IP 185
P
Sbjct: 184 PP 185
>gi|58698057|ref|ZP_00372981.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58535414|gb|EAL59489.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila ananassae]
Length = 203
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
Query: 13 TSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVL 72
T +LRK G +PGIIYG D V ++++ K + + ++ L I GK E L
Sbjct: 19 TKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGSLSAHLIELNISGKKEYAL 78
Query: 73 LRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYI 132
+R+ QLH K V H D Q VD +I + +PL F+N +P +KL +++ + + +
Sbjct: 79 VRDIQLHVVKDTVQHVDLQFVDKGSEIKIDIPLSFVNESKAPGIKLGG-VLNVLCRSIAV 137
Query: 133 SCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
C P +P+ IE++L + SIH++D+KLP GV + EE+ TI T
Sbjct: 138 KCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVT 186
>gi|254995469|ref|ZP_05277659.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. Mississippi]
Length = 218
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R K GT +R LR G +P ++YG N+D V IS++H + S ++
Sbjct: 7 IRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQLI 66
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L I GK E L + Q H V H DFQ VD +I V+VPL F+N + VKL
Sbjct: 67 KLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGG 126
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N++ L I C P +P+ +E++L + + SIH+SD+ LP + V EE+P I
Sbjct: 127 AL--NILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMK-EENPVI 183
Query: 180 ATAIIPVNTLESDNNSSIEKEKNNNS 205
A+ E+ + + E+
Sbjct: 184 ASVSATAAVEEAKEDGAPEESAQGQG 209
>gi|398848314|ref|ZP_10605135.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM84]
gi|398248754|gb|EJN34155.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM84]
Length = 198
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGG+K+ +++ I + E S ++ L +
Sbjct: 8 AQARTDLGKGASRRLRHSANIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHVIELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K ++HADF RV +K+ KVP+HF+ E +P K IS
Sbjct: 68 DGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFVGEE-APIKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+V+S++ +SC K+LP+FIE++L EV + IHLSD+K P+GV +
Sbjct: 125 HVVSEIEVSCEAKDLPEFIEVDLANAEVGSIIHLSDLKAPKGVEFV 170
>gi|148546001|ref|YP_001266103.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida F1]
gi|386010381|ref|YP_005928658.1| 50S ribosomal protein L25 [Pseudomonas putida BIRD-1]
gi|395447142|ref|YP_006387395.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida ND6]
gi|397698431|ref|YP_006536314.1| 50S ribosomal protein L25 [Pseudomonas putida DOT-T1E]
gi|421524624|ref|ZP_15971245.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida LS46]
gi|166223707|sp|A5VYF9.1|RL25_PSEP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148510059|gb|ABQ76919.1| LSU ribosomal protein L25P [Pseudomonas putida F1]
gi|313497087|gb|ADR58453.1| 50S ribosomal protein L25 [Pseudomonas putida BIRD-1]
gi|388561139|gb|AFK70280.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida ND6]
gi|397335161|gb|AFO51520.1| 50S ribosomal protein L25 [Pseudomonas putida DOT-T1E]
gi|402751087|gb|EJX11600.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida LS46]
Length = 197
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGG+K+ +++ I + E S ++ L +
Sbjct: 8 AQARTDLGKGASRRLRHSLSIPAVVYGGDKEAQSLTILAKEITKLFENEAAFSHVIELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K+ ++HADF RV +K+ KVP+HFIN E +P K IS
Sbjct: 68 DGVKQNVIIKAMQRHPAKQFIMHADFVRVVAGQKLTAKVPVHFINEE-APVKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+V S++ +SC K+LP+FIE++L E+ T IHLSD+K P+GV +
Sbjct: 125 HVESEIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSDLKAPKGVEFV 170
>gi|456357714|dbj|BAM92159.1| 50S ribosomal protein L25 [Agromonas oligotrophica S58]
Length = 235
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 95/162 (58%), Gaps = 5/162 (3%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKL 84
VPG+IYG N+ P+ IS+ + + F ++I ++ + GK V+ R+F L K
Sbjct: 29 VPGVIYGDNQPPLPISVEDRELRQRILAGRFLTTIFDVSLDGKKHRVIPRDFHLDPVKDF 88
Query: 85 VLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS-DLYISCLPKNLPKFI 143
+H DF R+ I V VPLH + SE +P VK + N+++ L + CL +N+P+FI
Sbjct: 89 PIHVDFMRLGQGATIRVSVPLHVVGSEAAPGVKRGGTV--NIVTHTLDLECLAENIPQFI 146
Query: 144 EINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
E ++ +E+N S+H+SD+KLP GV + + +D T+ T + P
Sbjct: 147 EADVSALEINHSLHISDVKLPTGVKTL--SRDDATLVTIVPP 186
>gi|222475670|ref|YP_002564087.1| 50S ribosomal protein L25 [Anaplasma marginale str. Florida]
gi|254801033|sp|B9KHC7.1|RL25_ANAMF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|222419808|gb|ACM49831.1| 50S ribosomal protein L25 (rplY) [Anaplasma marginale str. Florida]
Length = 218
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R K GT +R LR G +P ++YG N+D V IS++H + S ++
Sbjct: 7 IRVDASVRAKCGTGSARALRAAGLIPAVVYGKNRDAVNISLSHADFLKKCRTLPIFSQLI 66
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L I GK E L + Q H V H DFQ VD +I V+VPL F+N + VKL
Sbjct: 67 KLCIDGKEEFALTKEIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGG 126
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N++ L I C P +P+ +E++L + + SIH+SD+ LP + V EE+P +
Sbjct: 127 AL--NILHRSLLIRCAPDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMK-EENPVV 183
Query: 180 ATAIIPVNTLESDNNSSIEKEKNNNS 205
A+ E+ + + E+
Sbjct: 184 ASVSATAAVEEAKEDGAPEESAQGQG 209
>gi|373450261|ref|ZP_09542282.1| 50S ribosomal protein L25 [Wolbachia pipientis wAlbB]
gi|371932534|emb|CCE77280.1| 50S ribosomal protein L25 [Wolbachia pipientis wAlbB]
Length = 203
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
+KKK + LR+ G +P +IYG D V ++++ K + ++ L+I GK
Sbjct: 17 KKKKAM---QALREKGSIPAVIYGKGHDNVNLTLSAKEFTKQYKSGALSAHLIELDISGK 73
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E L+R+ Q H K V H DFQ VD +I + +PL FIN SP +KL +++ +
Sbjct: 74 KEYALVRDIQWHVVKDTVQHVDFQFVDKGSEIKIDIPLSFINEGKSPGIKLGG-VLNVLC 132
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+ + C P+ +P+ IEI+L + SIH++D+KLP GV + EE+ TI T
Sbjct: 133 RSITVKCSPEKIPQVIEIDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVT 186
>gi|312114466|ref|YP_004012062.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodomicrobium vannielii ATCC 17100]
gi|311219595|gb|ADP70963.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodomicrobium vannielii ATCC 17100]
Length = 205
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 102/178 (57%), Gaps = 4/178 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R+ G +R LR VPGI+YGG K P +++ + ++ + F S++ L+I
Sbjct: 9 AQAREGTGKLANRALRAKKLVPGIVYGGEKGPANVALEYRHVWQHYQTGHFLSTVYLLDI 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK E V+ R+ Q+ + +H DF RV +I V++P+HF+N E SP +K +
Sbjct: 69 DGKKERVIPRDVQVDPVRDFPIHVDFLRVSKSSRIEVEIPVHFVNEEASPGLKRGGAL-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N++ + +SC ++P+FI ++L ++ SIH+S +KLP G++ T+ D T+AT
Sbjct: 127 NIVRHAVELSCPADSIPEFITVDLTGYDIGDSIHISAVKLPAGITPT-ITDRDFTVAT 183
>gi|424862817|ref|ZP_18286730.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86A]
gi|400757438|gb|EJP71649.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86A]
Length = 238
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 107/186 (57%), Gaps = 1/186 (0%)
Query: 8 RKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R++ G++ +R +RK+ G VP I+YG K+ + I + N + A + E F++ +L ++
Sbjct: 12 RERTGSNKARVIRKVDGMVPAIVYGDEKETLNIKLKLNELTKASENELFYTQVLLIKTGD 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V+L+ Q K LHADFQRV ++ K+ V +P+ FIN E V+ + +++
Sbjct: 72 NEEKVVLKELQRDPAKGKFLHADFQRVSSKTKLKVVIPVSFINEEDCIGVREDGGVVTKT 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
I ++ I CL N+P+ I++++EK+ + SI L++I LP G + TEE + ++
Sbjct: 132 IREIEIMCLAGNIPESIDVDIEKLNLGDSIRLTEISLPDGSEIPGLTEETDQMVVSVNAP 191
Query: 187 NTLESD 192
+E D
Sbjct: 192 KAVEED 197
>gi|337266802|ref|YP_004610857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
opportunistum WSM2075]
gi|336027112|gb|AEH86763.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
opportunistum WSM2075]
Length = 212
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 2/177 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G +R +R+ GKVP +IYG + P+ I++ + IY+ + F ++I +++
Sbjct: 10 AEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGFLTTIATIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL ++FQL K +H DF R+ + +++V VP+HFIN + SP +K +++
Sbjct: 70 DGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIK-RGGVLN 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
V ++ C +P+FI I+L + SIH+S +KLP GV + S + D T+AT
Sbjct: 129 IVRHEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVKLPAGVKPVIS-DRDFTVAT 184
>gi|103487102|ref|YP_616663.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingopyxis
alaskensis RB2256]
gi|122985000|sp|Q1GSP2.1|RL25_SPHAL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|98977179|gb|ABF53330.1| LSU ribosomal protein L25P [Sphingopyxis alaskensis RB2256]
Length = 212
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 110/197 (55%), Gaps = 4/197 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R++ G SR LR+ G+VP ++YGG ++P+ I + ++ L F +S++
Sbjct: 5 LTLTAETRERGGKGASRELRRNGRVPAVVYGGKEEPLMIHVEEKLLMKQLMTGHFMNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK L ++ H K +HADF R+ + + V VP+ F N E SP +K
Sbjct: 65 MIEVGGKQIRTLPKDVAFHPVKDRPIHADFLRIAKDATVQVAVPVVFQNEEKSPGLK-RG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
+++ V +L + C N+P I I++ ++ SIH+S++ LP+GV S I T+ D TI
Sbjct: 124 GVLNIVRHELELVCDADNIPDEIAIDVTGFDIGDSIHISNVTLPKGVESAI--TDRDFTI 181
Query: 180 ATAIIPVNTLESDNNSS 196
AT + P SD +++
Sbjct: 182 ATIVAPSALKSSDGDTT 198
>gi|399036824|ref|ZP_10733788.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF122]
gi|398065651|gb|EJL57272.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF122]
Length = 204
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I+++ N + + F ++I
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGFMTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HF+N E S +K
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFVNEEKSQGLKAGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+SD+ LP+GV+ + + + D TIA
Sbjct: 126 -VLNIVRHEIEVQCPADAIPEFFNVDLSGKKIGDSIHISDLTLPKGVAPVIA-DRDFTIA 183
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 184 TIIAPAGGVD 193
>gi|319781882|ref|YP_004141358.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317167770|gb|ADV11308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 213
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 2/177 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G +R +R+ GKVP +IYG + P+ I++ + IY+ + F ++I +++
Sbjct: 10 AEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGFLTTIATIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL ++FQL K +H DF R+ + +++V VP+HFIN + SP +K +++
Sbjct: 70 DGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIK-RGGVLN 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
V ++ C +P+FI ++L + SIH+S +KLP GV + S + D TIAT
Sbjct: 129 IVRHEVEFHCPANAIPEFITVDLTGANIGDSIHISAVKLPAGVKPVIS-DRDFTIAT 184
>gi|218675424|ref|ZP_03525093.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli GR56]
Length = 204
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HF N SP +K+
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVSVEIPVHFTNEAKSPGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V + + C +P+F +I+L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHQVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTPV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T + P ++
Sbjct: 183 TIVAPAAGVD 192
>gi|85708586|ref|ZP_01039652.1| ribosomal protein L25 [Erythrobacter sp. NAP1]
gi|85690120|gb|EAQ30123.1| ribosomal protein L25 [Erythrobacter sp. NAP1]
Length = 228
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R++ G SR LR+ G+VP +IYGG ++P I + + L F +SI+
Sbjct: 5 LTLPAEARERAGKGASRALRREGRVPAVIYGGKEEPTTIHVEEKELVKQLMTGHFMNSIV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G+ L ++ LH HADF R+ + K+ V++P+ F+ E SP +K
Sbjct: 65 KIEVGGETIRTLPKDVALHPVTDRPTHADFFRLSRDAKVEVQIPVVFVGEEQSPGLKKGG 124
Query: 121 CIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ NV+ +L + C +P IEI++E EV SIH+S++ LP G SV T+ D TI
Sbjct: 125 VL--NVVRHELDLICEADKIPGEIEISVEGKEVGDSIHISEVNLPEG-SVSSITDRDFTI 181
Query: 180 ATAIIP 185
AT + P
Sbjct: 182 ATLVAP 187
>gi|86282729|gb|ABC91792.1| 50S ribosomal protein L25 [Rhizobium etli CFN 42]
Length = 233
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 37 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIAINTNEVTKRIHAGGFMTTVA 94
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + LH DF RV ++ V++P+HFIN SP +K+
Sbjct: 95 TIEVDGKKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPGLKVGG 154
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F I+L ++ SIH+S++ LP+ V+ + + D TIA
Sbjct: 155 -VLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHISEVTLPKSVTPV--IDRDFTIA 211
Query: 181 TAIIPVNTLE 190
T + P ++
Sbjct: 212 TIVAPAGGVD 221
>gi|13472406|ref|NP_103973.1| 50S ribosomal protein L25 [Mesorhizobium loti MAFF303099]
gi|71153162|sp|Q98HV7.1|RL25_RHILO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|14023152|dbj|BAB49759.1| 50S ribosomal protein L25 [Mesorhizobium loti MAFF303099]
Length = 213
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 2/177 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G +R +R+ GKVP +IYG + P+ I++ + IY+ + F ++I +++
Sbjct: 10 AEAREQVGKGSARAVRRNGKVPAVIYGDKQPPLAIALTYKDIYYKIHGGGFLTTIATIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL ++FQL K +H DF R+ + +++V VP+HFIN + SP +K +++
Sbjct: 70 DGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIK-RGGVLN 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
V ++ C +P+FI I+L + SIH+S ++LP GV + S + D TIAT
Sbjct: 129 IVRHEVEFHCPANAIPEFITIDLTGTNIGDSIHISAVQLPAGVKPVIS-DRDFTIAT 184
>gi|148559338|ref|YP_001259412.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ovis
ATCC 25840]
gi|148370595|gb|ABQ60574.1| ribosomal protein L25, Ctc-form [Brucella ovis ATCC 25840]
Length = 233
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR+ G++P +IYG ++P+ I++++ I++ + F +++ +E+ GK
Sbjct: 38 RTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGSGFKTTVATIEVDGK 97
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + H DF RV + +HV VP+HF N E +P +K + NV+
Sbjct: 98 KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL--NVV 155
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+P N +P+ +EI+L +E+ S+H+S +KLP+G + + D TIAT P
Sbjct: 156 RHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPA-IQDRDFTIATIAAPA 214
Query: 187 N 187
Sbjct: 215 G 215
>gi|395786698|ref|ZP_10466425.1| 50S ribosomal protein L25 [Bartonella tamiae Th239]
gi|423716408|ref|ZP_17690598.1| 50S ribosomal protein L25 [Bartonella tamiae Th307]
gi|395422996|gb|EJF89192.1| 50S ribosomal protein L25 [Bartonella tamiae Th239]
gi|395429337|gb|EJF95405.1| 50S ribosomal protein L25 [Bartonella tamiae Th307]
Length = 210
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 112/205 (54%), Gaps = 6/205 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG+S R LR+ G +P +IYG + P+ I++ + +++ + F +++
Sbjct: 7 LKAEARERVGKGSS--RELRRNGLIPAVIYGDKQAPIAIAVPYKEVFYKIHGGGFRTTVA 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+EI + VL +++QL + +H DF RV + + V++P+ F+N E +P +KL
Sbjct: 65 TIEINNQKIQVLPKDYQLDPVRDFPMHVDFLRVSAKSVVTVEIPVRFLNEEAAPGIKLGG 124
Query: 121 CIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N++ ++ ++ ++P IEI+L EV SIH+S +KLP GV + + D TI
Sbjct: 125 VL--NIVRHEVEVTAPANSIPDSIEIDLTGYEVGDSIHISAVKLPNGVEPVIQ-DRDFTI 181
Query: 180 ATAIIPVNTLESDNNSSIEKEKNNN 204
AT P DN+ E E +
Sbjct: 182 ATIAPPATMGAEDNDGEGETESEDG 206
>gi|153008961|ref|YP_001370176.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
anthropi ATCC 49188]
gi|404318683|ref|ZP_10966616.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
anthropi CTS-325]
gi|166223698|sp|A6WZE3.1|RL25_OCHA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|151560849|gb|ABS14347.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ochrobactrum
anthropi ATCC 49188]
Length = 209
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR+ G++P +IYG ++P+ I++++ I++ + F +++ +E+ GK
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATIEVDGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + H DF RV + +HV VP+HF N E +P +K + N++
Sbjct: 72 KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+P N +P+ +E +L +E+ S+H+S IKLP+GV+ + D TIAT P
Sbjct: 130 RHDVELIVPANAIPEALEFDLTGLEIGDSVHISAIKLPKGVTAA-IQDRDFTIATIAAPA 188
Query: 187 N 187
Sbjct: 189 G 189
>gi|424896232|ref|ZP_18319806.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393180459|gb|EJC80498.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 202
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HFIN E S +K+
Sbjct: 66 TIEVDGKKFKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V + + C +P+F ++L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHQVEVHCPADAIPEFFNVDLSGKKIGDSIHISEVTLPKGVTTV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 183 TIIAPAAGID 192
>gi|357026103|ref|ZP_09088211.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
amorphae CCNWGS0123]
gi|355542067|gb|EHH11235.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
amorphae CCNWGS0123]
Length = 213
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 104/177 (58%), Gaps = 2/177 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G +R +R+ GKVP +IYG + P+ I++ + IY+ + F ++I +++
Sbjct: 10 AEAREQVGKGSARAVRRNGKVPAVIYGDRQPPLAIALTYKDIYYKIHGGGFLTTIATIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL ++FQL K +H DF R+ + +++V VP+HFIN + SP +K +++
Sbjct: 70 DGKKIQVLPKDFQLDPVKDFPVHVDFLRIGKDTEVNVDVPVHFINEDKSPGIK-RGGVLN 128
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
V ++ C +P+FI ++L ++ SIH+S + LP GV + S + D TIAT
Sbjct: 129 IVRHEVEFHCPANAIPEFITVDLTGADIGDSIHISAVTLPAGVKPVIS-DRDFTIAT 184
>gi|319408909|emb|CBI82566.1| 50S ribosomal protein L25 [Bartonella schoenbuchensis R1]
Length = 204
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++++ I++ + F +++ +E+ K
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAVSYKEIFYKIHAGGFRTTVATIEVDKK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + LH DF RV + +HV +P+HF+N + +P +K + N++
Sbjct: 72 RIQVLPKDYQLDPVRDFPLHVDFLRVSEKSVVHVNIPVHFLNEDTAPGIKRGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ I I+L + SIH+S ++LP+GV+ + + D TIAT P
Sbjct: 130 RHEIECTAPANAIPEAINIDLSSYSIGDSIHISAVQLPKGVTPV-IQDRDFTIATIAAPA 188
Query: 187 NTLESDNNSSIEKEKNN 203
T +D NS E ++NN
Sbjct: 189 GTNVND-NSEQESDENN 204
>gi|407769661|ref|ZP_11117035.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407287178|gb|EKF12660.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 206
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 2/194 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G +R +R+ G VPG+IYG ++PV ++ + L K+ F S IL+++I +
Sbjct: 11 RERAGKGAARAVRRAGMVPGVIYGAKQEPVLFQIDPRPLNKLLHKQGFFSHILDVKIGKE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL R+ Q +H DF R + + V+VP+ F+N E SP +K +++ V
Sbjct: 71 TYEVLPRDVQFDKVTDAPIHVDFLRFAKGQTMTVEVPVRFVNEEKSPGLK-KGGVLNIVR 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVN 187
D+ + C P +P+ + +L +EV SIH+S IKLP+GV + T+ D T+AT P
Sbjct: 130 HDVEVECAPNAIPEELVFDLTGVEVGDSIHISAIKLPKGVE-LTITDRDFTVATVAAPSA 188
Query: 188 TLESDNNSSIEKEK 201
+N S + E+
Sbjct: 189 LKSEENAESADDEE 202
>gi|162329634|ref|YP_470519.2| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli CFN 42]
gi|109893385|sp|Q2K5U4.2|RL25_RHIEC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
Length = 204
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIAINTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + LH DF RV ++ V++P+HFIN SP +K+
Sbjct: 66 TIEVDGKKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQVTVEIPVHFINEAKSPGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F I+L ++ SIH+S++ LP+ V+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHISEVTLPKSVTPV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T + P ++
Sbjct: 183 TIVAPAGGVD 192
>gi|225627977|ref|ZP_03786013.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo]
gi|237815928|ref|ZP_04594925.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A]
gi|294852853|ref|ZP_06793526.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026]
gi|297248806|ref|ZP_06932524.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str.
B3196]
gi|17982392|gb|AAL51662.1| lsu ribosomal protein l25p [Brucella melitensis bv. 1 str. 16M]
gi|225617140|gb|EEH14186.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo]
gi|237789226|gb|EEP63437.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A]
gi|294821442|gb|EFG38441.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026]
gi|297175975|gb|EFH35322.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str.
B3196]
Length = 233
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR+ G++P +IYG ++P+ I++++ I++ + F +++ +E+ GK
Sbjct: 38 RTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATIEVDGK 97
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + H DF RV + +HV VP+HF N E +P +K + NV+
Sbjct: 98 KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL--NVV 155
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+P N +P+ +EI+L +E+ S+H+S +KLP+G + + D TIAT P
Sbjct: 156 RHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPA-IQDRDFTIATIAAPA 214
Query: 187 N 187
Sbjct: 215 G 215
>gi|87122995|ref|ZP_01078855.1| probable ribosomal protein L25 [Marinomonas sp. MED121]
gi|86161732|gb|EAQ63037.1| probable ribosomal protein L25 [Marinomonas sp. MED121]
Length = 192
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R ++G SR LR KVP +IYGG+ P I+ N + + + F ++++
Sbjct: 3 LSINAVARSEEGKGASRRLRLANKVPAVIYGGDAAPQSITFAENELKKITENQDFFTTVV 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ GK E V+++ Q H V+H DF RVD + I ++PL+F+ + S VK
Sbjct: 63 EVVTDGKAEKVIVKALQRHPASPAVMHVDFLRVDEARVITTRIPLNFVGAATSEGVKSQG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+S + CLP NLP +E++ K ++ HLSD +LP GV ++
Sbjct: 123 GRLSVEAKLAEVRCLPANLPAALEVDCTKAQLGDIFHLSDAQLPEGVELV 172
>gi|269468550|gb|EEZ80199.1| ribosomal protein L25/general stress protein Ctc [uncultured SUP05
cluster bacterium]
Length = 218
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Query: 16 SRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRN 75
+R LR+ KVP I+YG KDP I++N + I H L+K+ +S+L+L I K E V++++
Sbjct: 3 ARRLRREEKVPAIVYGAGKDPSAITLNIHEITHLLEKDGAFTSVLDLAIDKKTESVIIKD 62
Query: 76 FQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCL 135
Q H K + H D R++ ++ I +PL+FI + + A++L + I++ I+ + +SCL
Sbjct: 63 LQRHPAKNCITHVDLLRINMKQTITTNIPLNFIGEDDNEAMRLGA-ILNQFINTVEVSCL 121
Query: 136 PKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
P ++P I++++ +E+ I L+ + LP GV + T +D
Sbjct: 122 PADMPNGIDVDISGLEIGDHISLTGLSLPEGVILTALTHDD 162
>gi|424885426|ref|ZP_18309037.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393177188|gb|EJC77229.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 202
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F +++
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPIAIALNTNEVTKRIHAGGFMTTVA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V +P+HFIN + S +K+
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVAIPVHFINEDKSQGLKVGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+S++ LP+GV+ + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHISEVTLPKGVTTV--IDRDFTIA 182
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 183 TIIAPAAGID 192
>gi|409438366|ref|ZP_11265445.1| 50S ribosomal protein L25 [Rhizobium mesoamericanum STM3625]
gi|408749917|emb|CCM76616.1| 50S ribosomal protein L25 [Rhizobium mesoamericanum STM3625]
Length = 204
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I+++ N + + F ++I
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGFMTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK VL +++QL + +H DF RV ++ V++P+HFIN E S +K
Sbjct: 66 TIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQGLKAGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+SD+ +P+GV+ + + + D TIA
Sbjct: 126 -VLNIVRHEIEVHCPADAIPEFFNVDLNGKKIGDSIHISDLTMPKGVAPVIA-DRDFTIA 183
Query: 181 TAIIPVNTLE 190
T I P ++
Sbjct: 184 TIIAPAGGVD 193
>gi|23502403|ref|NP_698530.1| 50S ribosomal protein L25 [Brucella suis 1330]
gi|62290420|ref|YP_222213.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. 9-941]
gi|82700343|ref|YP_414917.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis biovar Abortus 2308]
gi|161511157|ref|NP_539398.2| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M]
gi|163843791|ref|YP_001628195.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
ATCC 23445]
gi|189024649|ref|YP_001935417.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
abortus S19]
gi|225853014|ref|YP_002733247.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis ATCC 23457]
gi|256263507|ref|ZP_05466039.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9]
gi|256369951|ref|YP_003107462.1| 50S ribosomal protein L25 [Brucella microti CCM 4915]
gi|260546956|ref|ZP_05822695.1| ribosomal protein L25 [Brucella abortus NCTC 8038]
gi|260565243|ref|ZP_05835727.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M]
gi|260755253|ref|ZP_05867601.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870]
gi|260758474|ref|ZP_05870822.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292]
gi|260762299|ref|ZP_05874642.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59]
gi|260884268|ref|ZP_05895882.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68]
gi|261214517|ref|ZP_05928798.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya]
gi|261222673|ref|ZP_05936954.1| 50S ribosomal protein L25 [Brucella ceti B1/94]
gi|261315706|ref|ZP_05954903.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10]
gi|261318144|ref|ZP_05957341.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94]
gi|261325595|ref|ZP_05964792.1| 50S ribosomal protein L25 [Brucella neotomae 5K33]
gi|261752824|ref|ZP_05996533.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513]
gi|261758713|ref|ZP_06002422.1| ribosomal protein L25 [Brucella sp. F5/99]
gi|265989175|ref|ZP_06101732.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1]
gi|265991589|ref|ZP_06104146.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1]
gi|265995427|ref|ZP_06107984.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether]
gi|265998637|ref|ZP_06111194.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1]
gi|306843118|ref|ZP_07475740.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2]
gi|306844535|ref|ZP_07477124.1| ribosomal protein L25, Ctc-form [Brucella inopinata BO1]
gi|340791143|ref|YP_004756608.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
pinnipedialis B2/94]
gi|376272734|ref|YP_005151312.1| 50S ribosomal protein L25 [Brucella abortus A13334]
gi|376281195|ref|YP_005155201.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
VBI22]
gi|384211896|ref|YP_005600978.1| 50S ribosomal protein L25 [Brucella melitensis M5-90]
gi|384225189|ref|YP_005616353.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
1330]
gi|384409006|ref|YP_005597627.1| 50S ribosomal protein25 [Brucella melitensis M28]
gi|384445567|ref|YP_005604286.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis NI]
gi|423166403|ref|ZP_17153106.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI435a]
gi|423171222|ref|ZP_17157897.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI474]
gi|423172696|ref|ZP_17159367.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI486]
gi|423178611|ref|ZP_17165255.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI488]
gi|423180653|ref|ZP_17167294.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI010]
gi|423183784|ref|ZP_17170421.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI016]
gi|423185276|ref|ZP_17171890.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI021]
gi|423188411|ref|ZP_17175021.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI259]
gi|68053010|sp|Q57BY2.1|RL25_BRUAB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053226|sp|Q8YIG3.2|RL25_BRUME RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153128|sp|Q8FZE8.1|RL25_BRUSU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893347|sp|Q2YLX6.1|RL25_BRUA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042348|sp|B0CHX4.1|RL25_BRUSI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736287|sp|B2S6Z6.1|RL25_BRUA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801037|sp|C0REH1.1|RL25_BRUMB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|23348389|gb|AAN30445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella suis
1330]
gi|62196552|gb|AAX74852.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella
abortus bv. 1 str. 9-941]
gi|82616444|emb|CAJ11507.1| Ribosomal protein L25 [Brucella melitensis biovar Abortus 2308]
gi|163674514|gb|ABY38625.1| ribosomal protein L25, Ctc-form [Brucella suis ATCC 23445]
gi|189020221|gb|ACD72943.1| Ribosomal protein L25 [Brucella abortus S19]
gi|225641379|gb|ACO01293.1| ribosomal protein L25, Ctc-form [Brucella melitensis ATCC 23457]
gi|256000114|gb|ACU48513.1| 50S ribosomal protein L25 [Brucella microti CCM 4915]
gi|260096006|gb|EEW79883.1| ribosomal protein L25 [Brucella abortus NCTC 8038]
gi|260151311|gb|EEW86405.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M]
gi|260668792|gb|EEX55732.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292]
gi|260672731|gb|EEX59552.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675361|gb|EEX62182.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870]
gi|260873796|gb|EEX80865.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68]
gi|260916124|gb|EEX82985.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya]
gi|260921257|gb|EEX87910.1| 50S ribosomal protein L25 [Brucella ceti B1/94]
gi|261297367|gb|EEY00864.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94]
gi|261301575|gb|EEY05072.1| 50S ribosomal protein L25 [Brucella neotomae 5K33]
gi|261304732|gb|EEY08229.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10]
gi|261738697|gb|EEY26693.1| ribosomal protein L25 [Brucella sp. F5/99]
gi|261742577|gb|EEY30503.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513]
gi|262553261|gb|EEZ09095.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1]
gi|262766540|gb|EEZ12329.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether]
gi|263002373|gb|EEZ14948.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1]
gi|263093528|gb|EEZ17562.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9]
gi|264661372|gb|EEZ31633.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1]
gi|306275146|gb|EFM56902.1| ribosomal protein L25, Ctc-form [Brucella inopinata BO1]
gi|306286723|gb|EFM58276.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2]
gi|326409553|gb|ADZ66618.1| Ribosomal protein L25 [Brucella melitensis M28]
gi|326539259|gb|ADZ87474.1| ribosomal protein L25, Ctc-form [Brucella melitensis M5-90]
gi|340559602|gb|AEK54840.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
pinnipedialis B2/94]
gi|343383369|gb|AEM18861.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
1330]
gi|349743556|gb|AEQ09099.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis NI]
gi|358258794|gb|AEU06529.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
VBI22]
gi|363400340|gb|AEW17310.1| large subunit ribosomal protein L25 [Brucella abortus A13334]
gi|374538556|gb|EHR10064.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI474]
gi|374543887|gb|EHR15365.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI435a]
gi|374544215|gb|EHR15692.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI486]
gi|374545392|gb|EHR16855.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI488]
gi|374548184|gb|EHR19636.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI010]
gi|374548612|gb|EHR20060.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI016]
gi|374558973|gb|EHR30362.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI259]
gi|374559986|gb|EHR31369.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI021]
Length = 207
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR+ G++P +IYG ++P+ I++++ I++ + F +++ +E+ GK
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATIEVDGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + H DF RV + +HV VP+HF N E +P +K + NV+
Sbjct: 72 KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL--NVV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+P N +P+ +EI+L +E+ S+H+S +KLP+G + + D TIAT P
Sbjct: 130 RHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPA-IQDRDFTIATIAAPA 188
Query: 187 N 187
Sbjct: 189 G 189
>gi|381168556|ref|ZP_09877750.1| 50S ribosomal protein L25 [Phaeospirillum molischianum DSM 120]
gi|380682416|emb|CCG42568.1| 50S ribosomal protein L25 [Phaeospirillum molischianum DSM 120]
Length = 206
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I+A R + G +R +R+ GKVPG++YG + V I ++ +++ L K F + +
Sbjct: 5 ISIVAEPRDRSGKGAARAVRRTGKVPGVVYGEKQAAVLIQLDPRVLWAQLNKPGFFTQLF 64
Query: 61 NLEIY-GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
++++ G E L R+ Q H +H DF RV + IHVKVP+H N SP VK
Sbjct: 65 DIDLGNGSRERALARDVQFHPVTDQPVHVDFLRVSADHAIHVKVPVHVANELSSPGVK-K 123
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
+++ + ++ + C P +P + I++ +E+ S+HL DI LP GV H + E
Sbjct: 124 GGVVNIELHEIELVCSPDAIPHGLTIDISALEIGHSVHLKDIALPAGVKPYHLSPE 179
>gi|85373995|ref|YP_458057.1| 50S ribosomal protein L25/general stress protein Ctc [Erythrobacter
litoralis HTCC2594]
gi|122544539|sp|Q2NAN1.1|RL25_ERYLH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|84787078|gb|ABC63260.1| ribosomal protein L25 [Erythrobacter litoralis HTCC2594]
Length = 229
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R++ G SR LR+ G+VP +IYGG ++P I + ++ L F +SI+
Sbjct: 5 LTLPAEARERAGKGASRALRREGRVPAVIYGGKEEPTMIHVEEKLLIKQLMTGHFMNSIV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+EI GK L ++ LH HADF R+ KI V VP+ F+N E SP +K
Sbjct: 65 EIEIGGKTVRTLPKDVALHPVSDRPEHADFFRLAKGGKIEVSVPVVFMNEEASPGLK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V +L + C +P IEI++ EV SIH+S+I LP G S T+ D TIA
Sbjct: 124 GVLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISEITLPEG-SESAITDRDFTIA 182
Query: 181 TAIIP 185
T + P
Sbjct: 183 TLVAP 187
>gi|393774509|ref|ZP_10362871.1| 50S ribosomal protein L25 [Novosphingobium sp. Rr 2-17]
gi|392719992|gb|EIZ77495.1| 50S ribosomal protein L25 [Novosphingobium sp. Rr 2-17]
Length = 202
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 4/179 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G+VP ++YGG +P+ I + + L F +SI+ +EI GK
Sbjct: 12 RERAGKGASRELRRTGRVPAVVYGGKSEPLAIHLEEKELARQLGTGHFFNSIIEIEIDGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++ H LHADF R+ +HV VP+ FIN E+SP +K +++ V
Sbjct: 72 KHRTQPKDVAFHPVSARPLHADFLRIAKGATVHVNVPVVFINEELSPGLK-RGGVLNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTIATAIIP 185
DL + C + +P I I++ ++ SIH S + LP+GV S I T+ D TIAT P
Sbjct: 131 HDLELVCDAEKIPHEIAIDVTGFDLGESIHFSHVALPKGVESAI--TDRDFTIATIATP 187
>gi|325277193|ref|ZP_08142836.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. TJI-51]
gi|324097679|gb|EGB95882.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. TJI-51]
Length = 199
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGG+K+ +++ I + E S ++ L +
Sbjct: 8 AQARTDLGKGASRRLRHSASIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHVIELNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + V+++ Q H K ++HADF RV +K+ VP+HFIN E +P K +S
Sbjct: 68 DGAKQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAVVPVHFINEE-APVKKGGE--VS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+V S + +SC K+LP+FIE++L E+ T IHLSD+K P+GV +
Sbjct: 125 HVESQIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFV 170
>gi|359789667|ref|ZP_09292603.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359254464|gb|EHK57472.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 282
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G +R +R+ GKVP +IYG + P+ I++++ IY+ + F ++I +++ GK
Sbjct: 82 REQVGKGSAREVRRNGKVPAVIYGDKQPPLAIALSYKDIYYKIHGGGFLTTIATIDVGGK 141
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + +H DF R+ + +++V VP+HFIN E SP +K +++ V
Sbjct: 142 KVQVLPKDYQLDPVRDFPMHVDFLRIGKDTEVNVNVPVHFINEEKSPGIK-RGGVLNIVR 200
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
++ C +P I I+L ++ SIH+S +KLP GV + S + D TIAT
Sbjct: 201 HEVEFHCPANAIPDSITIDLTGTDIGDSIHISAVKLPAGVKPVIS-DRDFTIAT 253
>gi|88607427|ref|YP_505816.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
phagocytophilum HZ]
gi|109893343|sp|Q2GII5.1|RL25_ANAPZ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88598490|gb|ABD43960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaplasma
phagocytophilum HZ]
Length = 211
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 4/197 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ A R++ GT +R LR G +P +IYG N+DP+ IS++ + S ++
Sbjct: 7 IKVDASVRERCGTGSARALRARGLIPAVIYGKNRDPINISLSQVDFLKKCRTFPIFSKLI 66
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L I K E V+ ++ Q H + H DFQ VD + ++ ++VPL F+N + VK
Sbjct: 67 ELCIGEKKEYVITKDIQKHPVSGAIAHVDFQFVDQDAEMKMEVPLVFLNEQKCVGVKRGG 126
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
I N++ L I C P ++PK +E++L + + S+H+SD+KLP ++V+ EEDP I
Sbjct: 127 VI--NILHRSLIIRCSPHHIPKSLEVDLIDVAIGHSLHVSDLKLPSTINVVMK-EEDPVI 183
Query: 180 ATAIIPVNTLESDNNSS 196
AT + + D +
Sbjct: 184 ATVVASGGGISEDAEEA 200
>gi|409427030|ref|ZP_11261561.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. HYS]
Length = 198
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G SR LR +P ++YGG + +++ I E S ++ L I
Sbjct: 8 AQARTDLGKGASRRLRHSANIPAVVYGGGQAAESVTILTKEITKLFDNEAAFSHVIELNI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK + V+++ Q H K+ ++HADF RV +K+ KVP+HFIN E +P K IS
Sbjct: 68 DGKKQNVVVKAMQRHPAKQFIMHADFVRVVAGQKLTAKVPVHFINEE-APVKKGGE--IS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ +++ +SC K+LP+FIE++L EV IHLSD+K P+GV +
Sbjct: 125 HTANEIEVSCEAKDLPEFIEVDLANAEVGAIIHLSDLKAPKGVEFV 170
>gi|239832418|ref|ZP_04680747.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301]
gi|239824685|gb|EEQ96253.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301]
Length = 277
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 104/181 (57%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR+ G++P +IYG ++P+ I++++ I++ + F +++ +E+ GK
Sbjct: 81 RTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATIEVDGK 140
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + H DF RV + +HV VP+HF N E +P +K + N++
Sbjct: 141 KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL--NIV 198
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+P N +P+ ++++L +E+ S+H+S IKLP+GV+ + D TIAT P
Sbjct: 199 RHDVELIVPANAIPEALDVDLTGLEIGDSVHISAIKLPKGVTPAIQ-DRDFTIATIAAPA 257
Query: 187 N 187
Sbjct: 258 G 258
>gi|384263337|ref|YP_005418525.1| 50S ribosomal protein L25 [Rhodospirillum photometricum DSM 122]
gi|378404439|emb|CCG09555.1| 50S ribosomal protein L25 [Rhodospirillum photometricum DSM 122]
Length = 261
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 111/190 (58%), Gaps = 4/190 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G +R R+ G +PG+IYGG + P ++++ ++ +K+ F + + ++ + G+
Sbjct: 73 RDRAGKGAARATRREGLIPGVIYGGRQAPALVAIDPRVVLGEMKRAGFSTRLFDILVDGE 132
Query: 68 -VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
V++ + Q+H + +HADF RVD E ++ V+VP+HFIN SP +K +++ V
Sbjct: 133 SAGRVMIHDVQMHPVTDMPIHADFLRVDAETEVTVEVPVHFINETRSPGLKRGG-VLNIV 191
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++ + P LP +E++L +E++ S+H+S + +P GV TE D T+ T P
Sbjct: 192 RHEVEVVGKPDLLPAALEVDLTGLEISDSVHISAVAIPAGVRPT-ITERDFTLCTIAAP- 249
Query: 187 NTLESDNNSS 196
+ L++D+ ++
Sbjct: 250 SVLKADSETT 259
>gi|444312219|ref|ZP_21147812.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
intermedium M86]
gi|443484471|gb|ELT47280.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
intermedium M86]
Length = 208
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 104/181 (57%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR+ G++P +IYG ++P+ I++++ I++ + F +++ +E+ GK
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATIEVDGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + H DF RV + +HV VP+HF N E +P +K + N++
Sbjct: 72 KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+P N +P+ ++++L +E+ S+H+S IKLP+GV+ + D TIAT P
Sbjct: 130 RHDVELIVPANAIPEALDVDLTGLEIGDSVHISAIKLPKGVTPA-IQDRDFTIATIAAPA 188
Query: 187 N 187
Sbjct: 189 G 189
>gi|395783967|ref|ZP_10463815.1| 50S ribosomal protein L25 [Bartonella melophagi K-2C]
gi|395425235|gb|EJF91405.1| 50S ribosomal protein L25 [Bartonella melophagi K-2C]
Length = 204
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 110/198 (55%), Gaps = 7/198 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++++ I++ + F +++ +E+ K
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAVSYKEIFYKIHAGGFRTTVATIEVDKK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + +H DF RV + +HV +P+HF+N + +P +K + N++
Sbjct: 72 RIQVLPKDYQLDPVRDFPMHVDFLRVSEKSIVHVNIPVHFLNEDTAPGIKRGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ I I+L + SIH+S ++LP GV+ + + D TIAT P
Sbjct: 130 RHEIECTAPANAIPEAINIDLSSYSIGDSIHISAVQLPEGVTPV-IQDRDFTIATIAAPA 188
Query: 187 NTLESDNNSSIEKEKNNN 204
T +DN+ E+E N N
Sbjct: 189 GTNVNDNS---EQESNEN 203
>gi|386063873|ref|YP_005979177.1| 50S ribosomal protein L25 [Pseudomonas aeruginosa NCGM2.S1]
gi|348032432|dbj|BAK87792.1| 50S ribosomal protein L25 [Pseudomonas aeruginosa NCGM2.S1]
Length = 160
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 81/121 (66%)
Query: 50 LKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFIN 109
L+ E S ++ L + G E VL++ Q H K V+HADF RV + K+ VPLHFIN
Sbjct: 10 LENEAAFSHVIALNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFIN 69
Query: 110 SEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
E++ VK + IS+ IS++ +SCLPK+LP+FIE+++ K+E+ +HLSD+K P+GV +
Sbjct: 70 EEVAVGVKQSGGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVEL 129
Query: 170 I 170
+
Sbjct: 130 V 130
>gi|333907087|ref|YP_004480673.1| 50S ribosomal protein L25 [Marinomonas posidonica IVIA-Po-181]
gi|333477093|gb|AEF53754.1| 50S ribosomal protein L25 [Marinomonas posidonica IVIA-Po-181]
Length = 192
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R ++G SR LR G VP +IYGG+ +P +S N + A+ F ++++
Sbjct: 3 LSINAVARSEEGKGASRRLRNQGLVPAVIYGGDAEPASVSFKDNELLKAVSTPGFLTAVV 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ + G + VL++ Q H V+H D QRV + I +VPL+FIN+ S V
Sbjct: 63 EVNVDGNAQKVLVKALQRHPATGDVMHMDLQRVKEDAVITTRVPLNFINAAQSDGVSKQG 122
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++ + CLP NLP+ +E+++ K ++ HLSD+ P GV +I
Sbjct: 123 GRLTIEAKLAEVRCLPANLPEVLEVDIAKGQLGDIFHLSDVIAPEGVELI 172
>gi|402825821|ref|ZP_10875074.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. LH128]
gi|402260639|gb|EJU10749.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. LH128]
Length = 202
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 102/186 (54%), Gaps = 4/186 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G SR LR+ G+VP +IYGGN++P+ I + + L F +SI+
Sbjct: 5 LNLPAETRDRAGKGASRALRREGRVPAVIYGGNEEPLAIHVQEKELSRQLGTGHFFNSII 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK ++ H LHADF R+ +HV VP+ F N E+SP +K
Sbjct: 65 EVEVDGKKFRTQPKDVAFHPVSDRPLHADFLRLAKGATVHVNVPVVFENEELSPGLK-RG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
+++ V DL + C + +P I I++ +V SIH+S +KLP+GV S I T+ D TI
Sbjct: 124 GVLNIVRHDLELVCDAEKIPHEITIDVTGFDVGESIHISHVKLPKGVESAI--TDRDYTI 181
Query: 180 ATAIIP 185
AT P
Sbjct: 182 ATIAAP 187
>gi|410447362|ref|ZP_11301458.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86E]
gi|409979637|gb|EKO36395.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86E]
Length = 234
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 99/179 (55%), Gaps = 1/179 (0%)
Query: 8 RKKKGTSFSRNLRK-IGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R + GT+ +R +R+ VP IIYG ++ I + N + A + E F++ +L + + G
Sbjct: 12 RVRTGTNKTREIRREDAMVPAIIYGNEEESKNIKLKLNELTKASENELFYTQVLKILLEG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ E V+L+ Q K LHADFQRV + K+ V VP F E VK +I+
Sbjct: 72 QEEKVVLKELQREPVKGKFLHADFQRVSRKTKLKVVVPFKFNGEEECEGVKTEGGVIAKA 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
IS++ I+CL ++P+ IEI++ + +N +I LSD+ LP G + EE+ + ++ P
Sbjct: 132 ISEIEIACLAGDIPEAIEIDISNLMLNEAIRLSDLTLPEGAEIPGYDEENDQMVVSVNP 190
>gi|254462647|ref|ZP_05076063.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium
HTCC2083]
gi|206679236|gb|EDZ43723.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium
HTCC2083]
Length = 218
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G VPGII+GG+ DP+ I++ N++ ALK F S++LN+++ G
Sbjct: 13 RTGTGKGAARQARRAGMVPGIIFGGDADPLPINVPFNVLLKALKAGRFKSTLLNMKVEGH 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V+ R+ Q H K L H DF R+ KI++ +P+ FIN E +P +K +++ V
Sbjct: 73 DDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIPVEFINEEAAPGIK-RGGVLTTV 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++ + ++P+ + +++ ++V +I++SDI LP G + + D +A P
Sbjct: 132 RPEVELIVTAGDIPEKLTVDMTGLDVGDTINISDITLPAGAK--PTIDRDFVVANLSAPS 189
Query: 187 NTLESDNNSSIEK 199
SDN E+
Sbjct: 190 GLKSSDNEDDGEE 202
>gi|148245095|ref|YP_001219789.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA]
gi|166223730|sp|A5CVE7.1|RL25_VESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146326922|dbj|BAF62065.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA]
Length = 225
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 100/176 (56%), Gaps = 1/176 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R +G +R LR+ K+P I+YG K P KI+++ I H LK E ++S+L
Sbjct: 3 LTINALTRNYQGKGANRRLRRNNKIPAIVYGTGKPPSKITLDIFEITHLLKNEETYTSVL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
NL + E V+++N Q H K + H DF R++ + I +P+ F E + A++L
Sbjct: 63 NLIVNKNKEAVIIKNLQRHPAKNSITHIDFLRINLNQSIITSIPIQFNGEEDNKAMRL-G 121
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+++ ++ + ISCLP NLP I +++ + + I+L+DI +P+G+ + T D
Sbjct: 122 AVLNQFMTAIEISCLPTNLPHSINVDISHLTIGEHINLTDINIPKGIVITALTHGD 177
>gi|114569308|ref|YP_755988.1| 50S ribosomal protein L25 [Maricaulis maris MCS10]
gi|122316567|sp|Q0ARN7.1|RL25_MARMM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|114339770|gb|ABI65050.1| LSU ribosomal protein L25P [Maricaulis maris MCS10]
Length = 215
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G +R R+ VPGI+YGG DPV +++ N I AL F S+++ ++ GK
Sbjct: 12 REGTGKGAARAARREDLVPGIVYGGKLDPVSVTLRGNEIRKALLGGHFLSNMIEIDHKGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V+ R+ Q H +H D RVD + KI+V V ++F N + PA+K +++ V
Sbjct: 72 RQTVIARDIQFHPVSDKAMHIDLYRVDEDTKINVNVAVNFTNEDACPALK-RGGVLNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
D+ + C ++P+ +E +L +++ S+H+S IKLP+GV V T+ D T+AT
Sbjct: 131 HDVELLCPAGSIPESVEADLTGLDIGDSLHISAIKLPKGV-VPTITDRDFTVAT 183
>gi|346991774|ref|ZP_08859846.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria sp.
TW15]
Length = 219
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 95/165 (57%), Gaps = 2/165 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A ER G +R R+ G VPGI++GG+KDP+ I + N+++ LK F S++ NL
Sbjct: 8 LVALERTGTGKGAARQARRDGMVPGIVFGGDKDPLPIQIPFNVLFKRLKAGRFKSTLWNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G ++ V+ R+ Q K L H D R+ KI + +P+ F+N E +P +K
Sbjct: 68 KVEGHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTTKIALFIPVEFVNEEAAPGIK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+++ V ++ + C ++P+ I ++L ME+N + +S + LP G
Sbjct: 127 VLTVVRPEVELLCTAGDIPEKITVDLTGMEINDVVTISSVDLPAG 171
>gi|347757711|ref|YP_004865273.1| 50S ribosomal protein L25 [Micavibrio aeruginosavorus ARL-13]
gi|347590229|gb|AEP09271.1| ribosomal protein L25, Ctc-form [Micavibrio aeruginosavorus ARL-13]
Length = 212
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A +R G +R LR+ K+P ++YG +K+PV I++ + +K + + +
Sbjct: 7 LTAEKRDGAGKGIARALRRENKIPAVVYGDSKEPVSITLPLKEVTLEYRKGYMFTHLCEI 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ G+ L L R+ QLH ++H DF RV + +I V VP+HFIN E +K +
Sbjct: 67 DVAGQKHLTLARDVQLHPVTDKIIHVDFLRVTPKTRIKVDVPVHFINDEECKGLKAGG-V 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
++ V ++ + C ++P+F+E++L ++ IH+ +KLP+G + + E D TIAT
Sbjct: 126 LNVVHHEVVLECAATDIPEFVEVDLTNYDLGDVIHMDVVKLPKGATSV--LEGDETIATI 183
Query: 183 IIPVNTLE 190
+P +E
Sbjct: 184 AVPRAVVE 191
>gi|414175243|ref|ZP_11429647.1| 50S ribosomal protein L25 [Afipia broomeae ATCC 49717]
gi|410889072|gb|EKS36875.1| 50S ribosomal protein L25 [Afipia broomeae ATCC 49717]
Length = 241
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 108/184 (58%), Gaps = 9/184 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G++P +IYG N+ P+ IS++ + ++ F ++I ++E+
Sbjct: 9 ATARPKAGKGAARAERRAGRIPAVIYGNNQPPLTISLDDAELRLRIQAGRFLTTIHDIEL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V+ R+F L + LH DF R+ KI V VPLH +NSE SP VK +
Sbjct: 69 DGKKHRVIPRDFSLDPVRDFPLHVDFLRLGEGSKIRVSVPLHVLNSETSPGVKRGGTV-- 126
Query: 125 NVIS---DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N+++ DL + N+P+++E ++ K+++ +S+H++DIKLP GV + T ED T+ T
Sbjct: 127 NIVTHNIDLEVPA--DNIPQYLEADVGKLDIGSSLHITDIKLPNGVKLF--TREDATLVT 182
Query: 182 AIIP 185
+ P
Sbjct: 183 IVPP 186
>gi|83859404|ref|ZP_00952925.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis sp.
HTCC2633]
gi|83852851|gb|EAP90704.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis alexandrii
HTCC2633]
Length = 210
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ GT +R R+ G VPG++YGG+K PV I++ +N + A+ F + ++ ++ G+
Sbjct: 11 RERTGTGGARETRRNGFVPGVLYGGDKGPVSIALKNNEVIKAINSGKFLAQMITIDHKGE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ VL R+ Q H + +H DFQRVD I V+V +HF N E SP +K + NV+
Sbjct: 71 KQSVLTRDVQFHPVRDEPVHIDFQRVDESTIITVEVTVHFHNDEKSPGLKRGGVL--NVV 128
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+P +P I+++L ++ SIH+S + LP GV+ T+ D TIAT
Sbjct: 129 RHAVEVNVPAGSIPDQIDVDLSGYDIGDSIHISAVTLPEGVTPA-ITDRDFTIAT 182
>gi|117924129|ref|YP_864746.1| 50S ribosomal protein L25 [Magnetococcus marinus MC-1]
gi|117607885|gb|ABK43340.1| LSU ribosomal protein L25P [Magnetococcus marinus MC-1]
Length = 198
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 3/164 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKE--TFHSSILNLEIY 65
R+ G +R LR+ G++P ++YG K+ + + MN N A+ + T +++ L +
Sbjct: 9 REGLGKGVARKLRQQGRIPAVVYGAGKENISLEMNLNAFRVAIAGQGPTLFNTVHQLSVD 68
Query: 66 GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
GKVE VL+R Q H L H DF R+D K I V VP+H N + +P +K II
Sbjct: 69 GKVENVLVRGVQRHPVTDLPEHVDFLRLDPTKMITVHVPVHLRNEDQAPGLK-RGGIIQI 127
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
V +L I CL N+P I ++ +ME+ SIH+ DI LP G V
Sbjct: 128 VRHELEIHCLSGNIPTEILVDCAEMEIGKSIHIEDITLPEGTKV 171
>gi|440227374|ref|YP_007334465.1| 50S ribosomal protein L25, Ctc-form [Rhizobium tropici CIAT 899]
gi|440038885|gb|AGB71919.1| 50S ribosomal protein L25, Ctc-form [Rhizobium tropici CIAT 899]
Length = 205
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + PV I++N N + + F ++I
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPVSIALNTNEVTKRIHAGGFLTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK VL +++QL + LH DF RV + V++P+HF N E SP +K
Sbjct: 66 TIDVDGKKIKVLPKDYQLDPVRDFTLHVDFLRVSGNTAVTVEIPVHFENHEKSPGLKAGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+S IKLP+ V+ + T+ D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFTVDLTGLKSGDSIHISAIKLPKNVTPV-ITDRDFTIA 183
Query: 181 TAIIPVNTL 189
T + P L
Sbjct: 184 TIVAPAAGL 192
>gi|58584353|ref|YP_197926.1| 50S ribosomal protein L25 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|68053026|sp|Q5GTJ0.1|RL25_WOLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|58418669|gb|AAW70684.1| Ribosomal protein L25 (general stress protein Ctc) [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 204
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Query: 17 RNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNF 76
R+LRK G +P ++YG + V ++++ K + ++ L+I GK E L+R+
Sbjct: 23 RSLRKKGNIPAVVYGKGHNNVNLTLSAKEFTKQYKLGFLSAHVIELDISGKKEYALVRDI 82
Query: 77 QLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLP 136
Q H K + H DFQ VD +I + +PL F+N SP +KL +++ + + + C P
Sbjct: 83 QWHVVKDTIQHVDFQFVDKGSEIKIDIPLSFVNESKSPGIKLGG-VLNVLCRSITVKCSP 141
Query: 137 KNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+P+ IE++L + S+H+SD+KLP GV + EE+ T+ T
Sbjct: 142 DKIPQAIEVDLSGKMIGQSVHISDVKLPGGVKLAAHEEENFTVVT 186
>gi|423712324|ref|ZP_17686626.1| 50S ribosomal protein L25 [Bartonella washoensis Sb944nv]
gi|395412198|gb|EJF78707.1| 50S ribosomal protein L25 [Bartonella washoensis Sb944nv]
Length = 208
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 4/197 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++ + I++ + F ++I + I +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGFRTTIATIVIGKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + LH DF R+ + + V +P+HF+N + +P +K + N++
Sbjct: 72 KITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ IEI+L + SIH+S ++LP GV + + D TIAT P
Sbjct: 130 RHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPEGVDPVIQ-DRDFTIATIAAPA 188
Query: 187 NTLESDNNSSIEKEKNN 203
SD S E EKNN
Sbjct: 189 GMDVSDETSEQENEKNN 205
>gi|209965201|ref|YP_002298116.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum centenum SW]
gi|209958667|gb|ACI99303.1| ribosomal 5S rRNA E-loop binding protein L25 [Rhodospirillum
centenum SW]
Length = 205
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G +R R+ G++P +IYG + PV IS+ N + L + F + + ++ + G
Sbjct: 12 RDRAGKGTARQTRREGRIPAVIYGNKEKPVMISLEFNQFFRELHRPGFFTHLFSITVDGA 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL R+ Q LH DF RV +I VK+P+ F N E SP +K +++ V
Sbjct: 72 THRVLPRDVQFDPVSDRPLHVDFLRVSAATEIVVKIPVEFANGETSPGIK-RGGVLNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
++ + C N+P+ I ++L ++N+SIH+S + LP GV + + D TIAT P
Sbjct: 131 HEIEVFCRADNIPEHITVDLADADLNSSIHISAVALPEGVRPTIA-DRDFTIATIAAP 187
>gi|27382552|ref|NP_774081.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 110]
gi|71153127|sp|Q89DJ8.1|RL25_BRAJA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|27355724|dbj|BAC52706.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 110]
Length = 238
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VPG+IYG N+ PV IS+ + + F ++++++++
Sbjct: 10 ATARPKSGKGAARAERRAGRVPGVIYGNNQPPVTISIEDRELRQRILAGRFLTTLVDIDL 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V+ R++ L K +H DF R+ I + VPLH + SE SP VK +
Sbjct: 70 EGKKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPGVKRGGTV-- 127
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+++ + + C +++P++IE ++ +E+ S+HLSD+KLP GV + T ED T+ T +
Sbjct: 128 NIVAHAIELECGVESIPQYIEADVGSLEIGHSLHLSDVKLPAGVKAL--TREDATLVTIV 185
Query: 184 IPVNTLE 190
P E
Sbjct: 186 PPSGYAE 192
>gi|395779604|ref|ZP_10460073.1| 50S ribosomal protein L25 [Bartonella washoensis 085-0475]
gi|395419979|gb|EJF86264.1| 50S ribosomal protein L25 [Bartonella washoensis 085-0475]
Length = 208
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 4/197 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++ + I++ + F ++I + I +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGFRTTIATIVIGKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + LH DF R+ + + V +P+HF+N + +P +K + N++
Sbjct: 72 KITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ IEI+L + SIH+S ++LP GV + + D TIAT P
Sbjct: 130 RHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPEGVEPVIQ-DRDFTIATIAAPA 188
Query: 187 NTLESDNNSSIEKEKNN 203
SD S E EKNN
Sbjct: 189 GMDVSDETSEQENEKNN 205
>gi|334141926|ref|YP_004535133.1| 50S ribosomal protein L25 [Novosphingobium sp. PP1Y]
gi|359401741|ref|ZP_09194707.1| large subunit ribosomal protein L25 [Novosphingobium
pentaromativorans US6-1]
gi|333939957|emb|CCA93315.1| large subunit ribosomal protein L25 [Novosphingobium sp. PP1Y]
gi|357596906|gb|EHJ58658.1| large subunit ribosomal protein L25 [Novosphingobium
pentaromativorans US6-1]
Length = 226
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R++ G SR LR+ G+VP ++YGGN++P+ I + + L F +SI+
Sbjct: 22 LNLPAETRERAGKGASRALRRDGRVPAVVYGGNEEPLAIHVEAKELVRQLGTGHFFNSIV 81
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK L ++ H LH DF R+ +HV VP+ F+N E +P +K
Sbjct: 82 EVEVGGKKLRTLPKDVAFHPVSDRPLHVDFLRLAKGASVHVNVPVSFVNEEKAPGLK-RG 140
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V +L + C +P+ I I++ +V SIH+S +KLP G S T+ D TIA
Sbjct: 141 GVLNVVRHELELVCAADKIPEEIAIDVTGFDVGESIHISHVKLPAG-SESAITDRDFTIA 199
Query: 181 TAIIPVNTLESDNNSS 196
T + P + L+S+ +
Sbjct: 200 TIVAP-SALKSEEGDT 214
>gi|390451314|ref|ZP_10236890.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor aquibiodomus RA22]
gi|389661154|gb|EIM72783.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor aquibiodomus RA22]
Length = 217
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 105/188 (55%), Gaps = 6/188 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R +R+ GKVP +IYG P+ I++ + + + F ++I
Sbjct: 8 LKAEARERVGKGSA--RAIRRNGKVPAVIYGEKDAPLSITLPYKEVSMKIFGGGFLTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK VL +++QL + V+H DF R+ + V VP+HFIN E +P +K
Sbjct: 66 TIDVDGKKIQVLPKDYQLDPVRDFVMHVDFLRIGKGTVVTVNVPVHFINEETAPGIKRGG 125
Query: 121 CIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ NV+ ++ +C +P +IE++L+ M++ S H+S +KLP GV + + D TI
Sbjct: 126 VL--NVVRHEVEFTCPATAIPDYIEVDLDGMDIGDSAHISAVKLPAGVEPTIA-DRDFTI 182
Query: 180 ATAIIPVN 187
AT P
Sbjct: 183 ATIAAPAG 190
>gi|403530240|ref|YP_006664769.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
quintana RM-11]
gi|403232312|gb|AFR26055.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
quintana RM-11]
Length = 208
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 112/198 (56%), Gaps = 6/198 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++++ I++ + F +++ + + +
Sbjct: 12 RERVGKGSSRELRRNGFIPAVIYGDKQPPLAIAVSYKEIFYKIYAGGFRTTVATIAVGQQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+VL +++QL + +H DF RV + + V +P+HF N + +P +K + N++
Sbjct: 72 KIMVLPKDYQLDPVRDFPIHVDFLRVSAQSVVEVSIPVHFFNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCL-PKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
I C+ P N +P+ IEI+L + SIH+S +KLP+ V+ + + D TIAT P
Sbjct: 130 RH-EIECIAPANAIPEAIEIDLSNYSIGDSIHISAVKLPKDVTPVIQ-DRDFTIATIAAP 187
Query: 186 VNTLESDNNSSIEKEKNN 203
SD++S E +K+N
Sbjct: 188 AGMNVSDDSSEQENDKDN 205
>gi|58696921|ref|ZP_00372422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila simulans]
gi|58536851|gb|EAL60059.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila simulans]
Length = 203
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Query: 13 TSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVL 72
T +LRK G +PGIIYG D V ++++ K + + ++ L I GK E L
Sbjct: 19 TKAMHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGSLSAHLIELNISGKKEYAL 78
Query: 73 LRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYI 132
+R+ QLH K V H DFQ +I + +PL F+N +P +KL +++ + + +
Sbjct: 79 VRDIQLHVVKDPVQHGDFQFDVKGSEIKIDIPLSFVNESKAPGIKLGG-VLNVLCRSIAV 137
Query: 133 SCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
C P +P+ IE++L + SIH++D+KLP GV + EE+ TI T
Sbjct: 138 KCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVT 186
>gi|170723623|ref|YP_001751311.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida W619]
gi|226736353|sp|B1JEQ2.1|RL25_PSEPW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|169761626|gb|ACA74942.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
putida W619]
Length = 198
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 3/163 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR +P ++YGG+K+ +++ I + E S ++ L + G
Sbjct: 11 RSDLGKGASRRLRHSLNIPAVVYGGDKEAQSLTIVAKEIAKLFENEAAFSHVIELNVDGA 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V+++ Q H K ++HADF RV +K+ VP+HFIN E +P K IS+V
Sbjct: 71 KQNVVVKAMQRHPAKGFIMHADFVRVVAGQKLTAVVPVHFINEE-APVKKGGE--ISHVE 127
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
S + +SC K+LP+FIE++L E+ T IHLSD+K P+GV +
Sbjct: 128 SQIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSDLKAPKGVEFV 170
>gi|265984577|ref|ZP_06097312.1| 50S ribosomal protein L25 [Brucella sp. 83/13]
gi|306837764|ref|ZP_07470630.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653]
gi|264663169|gb|EEZ33430.1| 50S ribosomal protein L25 [Brucella sp. 83/13]
gi|306407149|gb|EFM63362.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653]
Length = 207
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR+ G++P +IYG ++P+ I++++ I++ + F +++ +E+ GK
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATIEVDGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + H DF RV + +HV VP+HF N E +P +K + NV+
Sbjct: 72 KIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL--NVV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+P N +P+ +EI+L +E+ S+H+S +K P+G + + D TIAT P
Sbjct: 130 RHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKPPKGATPA-IQDRDFTIATIAAPA 188
Query: 187 N 187
Sbjct: 189 G 189
>gi|294085760|ref|YP_003552520.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665335|gb|ADE40436.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 211
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 11/194 (5%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A +R++ G +R R+ G VP +IYG K+P+ I+M+ I + + +L +
Sbjct: 7 ISAEQRERVGKGSARAARRAGLVPAVIYGDKKEPLGINMSTREITKIVHQPGIFGRLLEI 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+ GK VL R+ Q H +LH DF RV K+ V VP+ FIN ++ PA+K+ +
Sbjct: 67 VVDGKKSTVLTRDIQFHPVSDTILHMDFLRVSGSVKVAVGVPVEFINEDLCPALKIGGVL 126
Query: 123 ISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
NV+ ++ ++C ++P+ I I+L+ +++ SIH+S I LP GV +PTI
Sbjct: 127 --NVVRHEIELNCPATDIPEKIIIDLDGLKIGDSIHISAITLPDGV--------EPTITD 176
Query: 182 AIIPVNTLESDNNS 195
V TL+S
Sbjct: 177 RDFTVATLQSPGGG 190
>gi|222086595|ref|YP_002545129.1| 50S ribosomal protein L25 [Agrobacterium radiobacter K84]
gi|398381726|ref|ZP_10539832.1| ribosomal protein L25, Ctc-form [Rhizobium sp. AP16]
gi|221724043|gb|ACM27199.1| ribosomal protein L25, Ctc-form [Agrobacterium radiobacter K84]
gi|397718807|gb|EJK79388.1| ribosomal protein L25, Ctc-form [Rhizobium sp. AP16]
Length = 203
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I++N N + + F ++I
Sbjct: 8 LKAEARERVGKGSA--RELRRNGLIPAVIYGDKQAPISITLNTNEVTKRIHAGGFLTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ G VL +++QL + LH DF RV ++ V++P+HF+N E SP +K
Sbjct: 66 TIDVDGTKIKVLPKDYQLDPVRDFTLHIDFLRVSGNSQVTVEIPVHFVNQEKSPGLKAGG 125
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + C +P+F ++L ++ SIH+S + LP+GV + + + D TIA
Sbjct: 126 -VLNIVRHEVEVHCPADAIPEFFTVDLSGLKAGDSIHISHVTLPKGVVPVIA-DRDFTIA 183
Query: 181 TAIIPVNTL 189
T + P L
Sbjct: 184 TIVAPAAGL 192
>gi|395765972|ref|ZP_10446562.1| 50S ribosomal protein L25 [Bartonella sp. DB5-6]
gi|395410707|gb|EJF77259.1| 50S ribosomal protein L25 [Bartonella sp. DB5-6]
Length = 208
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 109/198 (55%), Gaps = 6/198 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++ + I+H + F +++ + I +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFHKIHAGGFRTTVATIAIGKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + LH DF R+ + + V +P+HF+N E +P +K + N++
Sbjct: 72 KITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEETAPGLKKGGVL--NIV 129
Query: 128 SDLYISCL-PKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
I C+ P N +P+ IEI+L + SIH+S ++LP+ V+ + + D TIAT P
Sbjct: 130 RH-EIECIAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVTPV-IQDRDFTIATIAAP 187
Query: 186 VNTLESDNNSSIEKEKNN 203
SD S E ++NN
Sbjct: 188 AGMDVSDETSEQEDDENN 205
>gi|421597665|ref|ZP_16041236.1| 50S ribosomal protein L25/general stress protein Ctc
[Bradyrhizobium sp. CCGE-LA001]
gi|404270227|gb|EJZ34336.1| 50S ribosomal protein L25/general stress protein Ctc
[Bradyrhizobium sp. CCGE-LA001]
Length = 239
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VPG+IYG N+ PV IS+ + + F ++++++E+
Sbjct: 10 ATARPKSGKGAARAERRAGRVPGVIYGNNQPPVTISIEDRELRQRILAGRFLTTLVDIEL 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V+ R++ L K +H DF R+ I + VPLH + +E SP VK +
Sbjct: 70 EGKKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAETSPGVKRGGTV-- 127
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+++ + + C +++P++IE ++ +E+ S+HL+D+KLP GV + T ED T+ T +
Sbjct: 128 NIVAHAIELECGVESIPQYIEADVGSLEIGHSLHLADVKLPAGVKAL--TREDATLVTIV 185
Query: 184 IPVNTLE 190
P E
Sbjct: 186 PPSGYAE 192
>gi|182680481|ref|YP_001834627.1| 50S ribosomal protein L25/general stress protein Ctc [Beijerinckia
indica subsp. indica ATCC 9039]
gi|226736280|sp|B2IG64.1|RL25_BEII9 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|182636364|gb|ACB97138.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 221
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 105/185 (56%), Gaps = 4/185 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A R G +R++R+ G++PG+IYGG P I++++ + + F ++I ++
Sbjct: 7 LAATVRGGTGKGAARSIRREGRIPGVIYGGGDAPEPITLDYRELNKLIYAGHFLTTIFDI 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E+ G + V+ R++QL K LH DF R+ + V VP+HFIN++I P +K +
Sbjct: 67 EVEGAKQRVVPRDYQLDPVKGQPLHVDFLRLKPGATLKVSVPIHFINADICPGLKKGGTL 126
Query: 123 ISNVISDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N++ +P + +P + +L +E+ S+H+S I LP G S++ +T+ D TIAT
Sbjct: 127 --NIVRHAIELKVPADAMPDVLTADLHALEIAESMHVSAITLPEGCSLV-ATDRDFTIAT 183
Query: 182 AIIPV 186
+ PV
Sbjct: 184 IVPPV 188
>gi|49473974|ref|YP_032016.1| 50S ribosomal protein L25 [Bartonella quintana str. Toulouse]
gi|71153120|sp|Q6G0F8.1|RL25_BARQU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|49239477|emb|CAF25829.1| 50s ribosomal protein l25 [Bartonella quintana str. Toulouse]
Length = 208
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 112/198 (56%), Gaps = 6/198 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++++ I++ + F +++ + + +
Sbjct: 12 RERVGKGSSRELRRNGFIPAVIYGDKQPPLAIAVSYKEIFYKIYAGGFRTTVATIAVGQQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+VL +++QL + +H DF RV + + V +P+HF N + +P +K + N++
Sbjct: 72 KIMVLPKDYQLDPVRDFPIHVDFLRVSAQSVVEVSIPVHFFNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCL-PKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
I C+ P N +P+ IEI+L + SIH+S +KLP+ V+ + + D TIAT P
Sbjct: 130 RH-EIECIAPANAIPEAIEIDLSNYSIGDSIHISVVKLPKDVTPVIQ-DRDFTIATIAAP 187
Query: 186 VNTLESDNNSSIEKEKNN 203
SD++S E +K+N
Sbjct: 188 AGMNVSDDSSEQESDKDN 205
>gi|304321414|ref|YP_003855057.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503]
gi|303300316|gb|ADM09915.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503]
Length = 212
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ GT SR +R+ G VP ++YGG+++P+ I + +N + A + + +++ G
Sbjct: 12 RQRAGTGGSRAVRRDGWVPAVLYGGDEEPLNIKLRYNQVLKAYQTGRLIDVLAKIKLEGG 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V+ R+ Q+ K L H D RVD K+ V VP+ F+N E P +K +++ V
Sbjct: 72 EQQVIGRDIQVDPVKDLPRHVDLMRVDARTKVTVNVPMRFLNEETCPGLK-KGGVLNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
++ + N+P+ +E +L +V +IH+S +KLP GV+ T+ D T+AT P
Sbjct: 131 HEVEVVASATNIPEALEADLAGADVGDTIHISAVKLPDGVTPT-ITDRDFTVATIAAP 187
>gi|399063059|ref|ZP_10746778.1| ribosomal protein L25, Ctc-form [Novosphingobium sp. AP12]
gi|398032813|gb|EJL26139.1| ribosomal protein L25, Ctc-form [Novosphingobium sp. AP12]
Length = 203
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 4/186 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R++ G SR+LR+ G+VP ++YGG ++P+ I + + L F +SI+
Sbjct: 5 LNLPAETRERAGKGASRDLRRNGRVPAVVYGGKEEPLAIHLEEKELTRQLMTGHFFNSII 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK ++ H LHADF RV +HV VP+ F N E SP +K
Sbjct: 65 EIEVGGKKYRTQPKDVAFHPVSDRPLHADFLRVAKGATVHVNVPVVFENEEASPGLK-RG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV-SVIHSTEEDPTI 179
+++ V DL + C + +P I I++ ++ SIH S +KLP+GV S I T+ D TI
Sbjct: 124 GVLNIVRHDLELVCDAEKIPHEITIDVTGFDLGESIHFSHVKLPQGVESAI--TDRDFTI 181
Query: 180 ATAIIP 185
AT P
Sbjct: 182 ATIATP 187
>gi|451940911|ref|YP_007461549.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
australis Aust/NH1]
gi|451900298|gb|AGF74761.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
australis Aust/NH1]
Length = 208
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 114/200 (57%), Gaps = 8/200 (4%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P IIYG + P+ +++++ I++ + F +++ +E+ +
Sbjct: 12 RERVGKGSSRALRRDGLIPAIIYGNKQPPLAVAVSYKEIFYKIHAGGFRTTVATVEVGKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + + +H DF R+ E + V +P+HF+N +I+P +K + N++
Sbjct: 72 KIQVLPKDYQLDPVRDVPVHVDFLRISAESVVQVDIPVHFLNEDIAPGIKRGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRG-VSVIHSTEEDPTIATAIIP 185
P N +P+ I+I+L + SIH+S ++LP G V VI + D TIAT P
Sbjct: 130 RHEIECTAPANAIPESIKIDLSGYSIGDSIHISAVQLPEGVVPVIQ--DRDFTIATIAAP 187
Query: 186 VNTLESDNNSSIEKEKNNNS 205
++ +D+++S E+E N
Sbjct: 188 A-SMSADDDAS-EQENGENG 205
>gi|407773385|ref|ZP_11120686.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
profundimaris WP0211]
gi|407283849|gb|EKF09377.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
profundimaris WP0211]
Length = 209
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 101/178 (56%), Gaps = 2/178 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G +R +R+ G VPG+IYG ++ V ++ ++ L + F+S +L +++ +
Sbjct: 11 RERAGKGAARAVRRAGMVPGVIYGAKQEAVLFQVDPRPLWKLLHQPGFYSHVLTVQVGKE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL R+ Q +LH DF R + I+V+VP+ F+N E SP +K +++ V
Sbjct: 71 KYEVLPRDVQFDKVSDEILHVDFLRFAKGQTINVEVPVRFVNEEKSPGLK-KGGVLNIVR 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
D+ + C P +P+ + +L +EV SIH+S IKLP+GV + T+ D T+AT P
Sbjct: 130 HDVEVLCAPSAIPEELVFDLTGVEVGDSIHISAIKLPKGVE-LTITDRDFTVATVAAP 186
>gi|88800290|ref|ZP_01115857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea
blandensis MED297]
gi|88777005|gb|EAR08213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea sp.
MED297]
Length = 208
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 96/168 (57%), Gaps = 5/168 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGG--NKDPVKISMNHNMIYHALKKETFHSSILNL 62
A R++ G SR LR+ KVP +IYGG N+ P +++ + A++ E F S +L +
Sbjct: 9 AVLREEHGKGASRRLRREKKVPAVIYGGAKNRKPQSLTLELRELVKAMENEAFFSHVLTI 68
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
I K E +L + Q H +H D +RV +H KVP+HF+ E V+ +
Sbjct: 69 NIGDKSEQAILMDVQRHPATDFPMHIDLERVTKSTVVHKKVPIHFVGEE---KVEKSGAK 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ ++L I+C +LP+FIE+++ +EV +HLS++KLP+GVS++
Sbjct: 126 ALHAANELEITCKVGDLPEFIEVDVAALEVGAVLHLSELKLPKGVSLV 173
>gi|386398380|ref|ZP_10083158.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM1253]
gi|385739006|gb|EIG59202.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM1253]
Length = 239
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VPG+IYG N+ P+ IS++ + + F ++++++++
Sbjct: 9 ATARPKSGKGAARAERRAGRVPGVIYGNNQPPLTISVDDRELRSRILAGRFLTTLVDIDL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V+ R++ L K +H DF R+ I + VPLH + +E SP VK +
Sbjct: 69 EGNKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAEGSPGVKRGGAV-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+++ + + C +N+P+FIE ++ +E+ S+HLSDIKLP GV + T ED T+ T +
Sbjct: 127 NIVAHAIELECGVENIPQFIEADVGSLEIGHSLHLSDIKLPAGVKAL--TSEDATLVTIV 184
Query: 184 IPVNTLE 190
P E
Sbjct: 185 PPSGYAE 191
>gi|261219662|ref|ZP_05933943.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1]
gi|261322551|ref|ZP_05961748.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1]
gi|260924751|gb|EEX91319.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1]
gi|261295241|gb|EEX98737.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1]
Length = 207
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G SR LR+ G++P +IYG ++P+ I++++ I++ + F +++ +E+ GK
Sbjct: 12 RTRVGKGSSRELRRNGQIPAVIYGDKQEPLAIAVSYKEIFYKIHGGGFKTTVATIEVDGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + H DF V + +HV VP+HF N E +P +K + NV+
Sbjct: 72 KIQVLPKDYQLDPVRDFPQHVDFLLVSAKSVVHVNVPVHFKNEEAAPGIKRGGVL--NVV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+P N +P+ +EI+L +E+ S+H+S +KLP+G + + D TIAT P
Sbjct: 130 RHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPA-IQDRDFTIATIAAPA 188
Query: 187 N 187
Sbjct: 189 G 189
>gi|402851637|ref|ZP_10899783.1| LSU ribosomal protein L25p [Rhodovulum sp. PH10]
gi|402498099|gb|EJW09865.1| LSU ribosomal protein L25p [Rhodovulum sp. PH10]
Length = 256
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G SR +R+ G++P +IYG N+ P+ I+++ + + F ++I ++ +
Sbjct: 31 ATARPRAGKGASRAVRREGRIPAVIYGDNQPPISIALDELEVRKRILAGRFLTTIFDIVL 90
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V+ R++Q+ + L LH DF R+ I V+VP+H N E +P +K +S
Sbjct: 91 DGTKHRVIPRDYQVEPLRDLPLHVDFLRLGEGATIRVRVPVHTSNPEAAPGIKRGGT-VS 149
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + + C +P+ IE++L +E+N S HLSDI LP +V +T+ +PT+ T +
Sbjct: 150 VVAHAVDLRCPADAIPESIEVDLTGLEINHSRHLSDIPLP--PNVRPATKANPTLVTIVP 207
Query: 185 PVNTLE 190
P E
Sbjct: 208 PSGYAE 213
>gi|163761599|ref|ZP_02168670.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43]
gi|162281195|gb|EDQ31495.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43]
Length = 234
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R LR+ G +P +IYG KDPV I+++ + + F ++I +++
Sbjct: 32 AEARAQVGKGSARELRRNGLIPAVIYGDKKDPVSIALSRKDVTLKIHAGGFMTTIATIDV 91
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G VL +++QL + ++H DF R+ ++ V++P+HF N E SP +K +++
Sbjct: 92 DGTKYSVLPKDYQLDPVRDFLMHVDFLRISKNTQVTVEIPVHFENEEKSPGIKRGG-VLN 150
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + +C ++P+ + ++L +EV +H+S + LP GV T+ D TIAT
Sbjct: 151 VVRHTVECNCPANSIPEALIVDLTGLEVGDGVHISHVTLPEGVHPT-ITDRDFTIATVAA 209
Query: 185 PVNTLESDNNSS 196
P L+SD+N+S
Sbjct: 210 PAG-LKSDDNAS 220
>gi|374577976|ref|ZP_09651072.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM471]
gi|374426297|gb|EHR05830.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM471]
Length = 239
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VPG+IYG N+ P+ IS++ + + F ++++++++
Sbjct: 9 ATARPKSGKGAARAERRAGRVPGVIYGNNQPPLTISVDDRELRSRILAGRFLTTLVDIDL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V+ R++ L K +H DF R+ I + VPLH + +E SP VK +
Sbjct: 69 EGNKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAEGSPGVKRGGAV-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+++ + + C +N+P+FIE ++ +E+ S+HLSDIKLP GV + T ED T+ T +
Sbjct: 127 NIVAHAIELECGVENIPQFIEADVGSLEIGHSLHLSDIKLPAGVKAL--TAEDATLVTIV 184
Query: 184 IPVNTLE 190
P E
Sbjct: 185 PPSGYAE 191
>gi|114769270|ref|ZP_01446896.1| Ribosomal protein L25 [Rhodobacterales bacterium HTCC2255]
gi|114550187|gb|EAU53068.1| Ribosomal protein L25 [Rhodobacterales bacterium HTCC2255]
Length = 221
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 93/158 (58%), Gaps = 2/158 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G VPG++YGG ++P I++ N+++ LK F S++ NL++ G
Sbjct: 13 RAGTGKGAARQARRDGLVPGVVYGGGEEPQAITIPFNILFKKLKDGGFMSTLFNLKVEGS 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ + R Q H K L H DF R+ + +I++ +P+HF+N E S +K ++ V
Sbjct: 73 DDVRAVCRGVQRHVVKDLPTHIDFLRLKRDSRINMNIPVHFLNEETSAGLK-KGGTLTIV 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLP 164
+++ + N+P +IE +LE +E+ +I++SDI LP
Sbjct: 132 RAEVELMVTAGNIPDYIEADLENLEIGETINISDITLP 169
>gi|319898492|ref|YP_004158585.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73]
gi|319402456|emb|CBI75997.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73]
Length = 208
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 103/178 (57%), Gaps = 2/178 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ IS+ + I++ + F +++ +EI +
Sbjct: 12 RERVGKGSSRKLRRNGLIPAVIYGNKQPPLAISVPYKEIFYKIHAGGFRTTVATIEIDKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + +H DF R+ +HV +P+HF+N +++P +K +++ V
Sbjct: 72 KIQVLPKDYQLDPIRDFPIHVDFLRISATSVVHVHIPVHFLNEDMAPGIK-RGGVLNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
++ + L +P+ IEI+L + SIH+S ++LP+GV+ + E D TIAT P
Sbjct: 131 HEIECTALAHAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPV-IQERDFTIATIAAP 187
>gi|384215561|ref|YP_005606727.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 6]
gi|354954460|dbj|BAL07139.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 6]
Length = 237
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VPG+IYG N+ PV IS+ + + F ++++++++
Sbjct: 9 ATARPKSGKGAARAERRAGRVPGVIYGNNQPPVTISIEDRELRQRILAGRFLTTLVDIDL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V+ R++ L K +H DF R+ I + VPLH + +E SP VK +
Sbjct: 69 EGKKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAESSPGVKRGGTV-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+++ + + C +++P++IE ++ +E+ S+HLSD+KLP GV + T ED T+ T +
Sbjct: 127 NIVAHAIELECGVESIPQYIEADVGTLEIGHSLHLSDVKLPAGVKAL--TREDATLVTIV 184
Query: 184 IPVNTLE 190
P E
Sbjct: 185 PPSGYAE 191
>gi|294011768|ref|YP_003545228.1| ribosomal protein L25 [Sphingobium japonicum UT26S]
gi|390167703|ref|ZP_10219683.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingobium
indicum B90A]
gi|292675098|dbj|BAI96616.1| ribosomal protein L25 [Sphingobium japonicum UT26S]
gi|389589568|gb|EIM67583.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingobium
indicum B90A]
Length = 204
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 4/202 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G SR LR+ G+VP +IYG N++P I + ++ L F +S++
Sbjct: 5 LTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLNKLLGTGHFFNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK L ++ H LHADF RV +HV VP+ F N + SP +K
Sbjct: 65 FVEVGGKKVRTLAKDVAFHPVTDRPLHADFLRVSEHATVHVNVPVIFKNEDASPGLK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + +P + I+L ++V SIH+ +KLP+G H E D T+A
Sbjct: 124 GVLNIVAHEIELIVDAAEIPDDVVIDLAGLDVGDSIHIGAVKLPKGAKAAHD-ETDFTVA 182
Query: 181 TAIIP--VNTLESDNNSSIEKE 200
T + P + + E DN + + E
Sbjct: 183 TIVAPSALKSAEGDNETPAQGE 204
>gi|338708195|ref|YP_004662396.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294999|gb|AEI38106.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 211
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 4/186 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ ++A +R + G SR +R+ G VP +IYG V I++ ++ L F +S++
Sbjct: 5 LNLLAKKRDRAGKGASRAIRREGLVPAVIYGDKTPAVAITVEEIALFKMLNTGHFMNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + GK L ++ Q H LH DF RV I V +P+ +++ E SP +K
Sbjct: 65 TLTVDGKKIPTLPKDVQFHPVTDRALHVDFLRVSATSMIEVAIPVSYVDEEKSPGIKRGG 124
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N+I +L + ++P+ IE+++E +EV SIH++ +KLP GV + H E +PT+
Sbjct: 125 VL--NIIHHELKLKVKATDIPEQIEVSVEGLEVGDSIHINQLKLPAGVELAHD-EHEPTV 181
Query: 180 ATAIIP 185
AT I P
Sbjct: 182 ATIIAP 187
>gi|407973854|ref|ZP_11154765.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor indicus C115]
gi|407430914|gb|EKF43587.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor indicus C115]
Length = 210
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R +R+ G +P +IYG + PV I++ H + + F ++I
Sbjct: 8 LKAEARERVGKGSA--RAIRRNGMIPAVIYGEKEAPVSITLPHKEVTMKIFGGGFLTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK VL +++QL + + LH DF R+ + V VP+HF N E +P +K
Sbjct: 66 TIDVDGKKIQVLPKDYQLDPVRDVPLHVDFLRIGKGTVVTVNVPVHFTNEEAAPGIK-RG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ SC +P+FIE++L ++ SIH+S +KLP GV V ++ D TIA
Sbjct: 125 GVLNIVRHEVEFSCPAIAIPEFIEVDLTGSDIGDSIHISAVKLPEGV-VPTISDRDFTIA 183
Query: 181 TAIIPVN 187
T P
Sbjct: 184 TIAAPAG 190
>gi|121602891|ref|YP_989277.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
bacilliformis KC583]
gi|421761080|ref|ZP_16197885.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
bacilliformis INS]
gi|166223664|sp|A1UTH4.1|RL25_BARBK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120615068|gb|ABM45669.1| ribosomal protein L25, Ctc-form [Bartonella bacilliformis KC583]
gi|411173490|gb|EKS43534.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
bacilliformis INS]
Length = 205
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 108/197 (54%), Gaps = 7/197 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ IS+ + +++ + F ++I LEI +
Sbjct: 12 RERVGKGSSRELRRNGFIPAVIYGDKQPPLAISVPYKEVFYKIHGGGFRTTIATLEIGKE 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + +H DF RV + +HV +P+HF+N + +P +K + N++
Sbjct: 72 KIQVLPKDYQLDPVRDFPMHVDFLRVSAKSIVHVNIPVHFLNEDTAPGIKRGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P I+I+L + SIH+S ++LP GV+ + + + TIAT P
Sbjct: 130 RHEIECTAPANAIPDAIQIDLSSYSIGDSIHISAVQLPEGVTPV-IQDRNFTIATIAAPA 188
Query: 187 ---NTLESDNNSSIEKE 200
+T E +NN S K+
Sbjct: 189 GMGDTSEEENNESDAKK 205
>gi|222149335|ref|YP_002550292.1| 50S ribosomal protein L25 [Agrobacterium vitis S4]
gi|221736319|gb|ACM37282.1| 50S ribosomal protein L25 [Agrobacterium vitis S4]
Length = 200
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I++N N + + F +++ +E+
Sbjct: 10 AETRERVGKGSSRELRRNGLIPAVIYGDKQAPIAITLNTNEVTKRIHAGGFMTTVATIEV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VL +++QL + +H DF RV ++ V VP+ F+N + S AVK +++
Sbjct: 70 NGEKIRVLPKDYQLDPVRDFTMHIDFLRVSANSQVTVAVPVRFVNEDKS-AVK-TGAVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V D+ + N+P+ I +LE +++ S+H+S +KLP GV+ + T+ D TIAT +
Sbjct: 128 IVRHDVELQVPANNIPEAITFDLEGLKIGDSVHISAVKLPSGVTPV-ITDRDFTIATLVA 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|398826814|ref|ZP_10585045.1| ribosomal protein L25, Ctc-form, partial [Bradyrhizobium sp. YR681]
gi|398220202|gb|EJN06659.1| ribosomal protein L25, Ctc-form, partial [Bradyrhizobium sp. YR681]
Length = 203
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VPG+IYG N+ P+ IS+ + + F ++++++++
Sbjct: 10 ATARPKSGKGAARAERRAGRVPGVIYGNNQPPLTISIADRELRQRILAGRFLTTLVDIDL 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V+ R++ L K +H DF R+ I + VPLH + SE SP VK +
Sbjct: 70 EGKKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPGVKRGGTV-- 127
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+++ + + C +++P++IE ++ +E+ S+HL+DIKLP GV + T ED T+ T +
Sbjct: 128 NIVAHAIELECGVESIPQYIEADVGALEIGHSLHLTDIKLPAGVKAL--TREDATLVTIV 185
Query: 184 IPVNTLE 190
P E
Sbjct: 186 PPSGYAE 192
>gi|395789660|ref|ZP_10469170.1| 50S ribosomal protein L25 [Bartonella taylorii 8TBB]
gi|395428498|gb|EJF94574.1| 50S ribosomal protein L25 [Bartonella taylorii 8TBB]
Length = 208
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 6/198 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++ + I+H + F +++ + I +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGEKQPPLAIAVPYKEIFHKIHAGGFRTTVATIAIGKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + LH DF R+ + + V +P+HF+N + +P +K + N++
Sbjct: 72 KVTVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCL-PKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
I C+ P N +P+ IEI+L + SIH+S ++LP+ V+ + + D TIAT P
Sbjct: 130 RH-EIECIAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVTPV-IQDRDFTIATIAAP 187
Query: 186 VNTLESDNNSSIEKEKNN 203
SD S E ++NN
Sbjct: 188 AGMDVSDEPSEQENDENN 205
>gi|188581655|ref|YP_001925100.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium populi BJ001]
gi|226736337|sp|B1Z970.1|RL25_METPB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|179345153|gb|ACB80565.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium populi BJ001]
Length = 228
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 11/185 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMN----HNMIYHALKKETFHSSIL 60
A R + G +R +R+ G++P +IYGGN+ P I+++ +IY F +++
Sbjct: 9 AVARDRVGKGAARAVRRQGQIPAVIYGGNQAPEAIAVDLIRTRTLIYAG----GFKTTLF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + GK + R++QL + LH DF RV + + + V VP+HF+N E +P +K
Sbjct: 65 DITVGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVSGQTVTVDVPVHFVNDEKAPGIKQKG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++ + + + P +P IE++L E+ IH SD++LP G ++ E T+A
Sbjct: 125 GTLNVALHTVSLDVAPDQIPDAIEVDLTGREIGDVIHASDLRLPAGT---YTGEPTDTVA 181
Query: 181 TAIIP 185
+ P
Sbjct: 182 NILPP 186
>gi|260431160|ref|ZP_05785131.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis
ITI-1157]
gi|260414988|gb|EEX08247.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis
ITI-1157]
Length = 215
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 4/195 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A ER G +R R+ G VPGI++GG+KDP+ I + N ++ LK F S++ NL
Sbjct: 8 LVALERTGTGKGAARQARRDGMVPGIVFGGDKDPLPIQIPFNELFKRLKAGRFKSTLWNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G ++ V+ R+ Q K L H D R+ +I + +P+ FIN E +P +K
Sbjct: 68 KVEGHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIALYIPVEFINEEAAPGIK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+++ V ++ + C ++P+ I ++L + +N + +S ++LP G + + D IA
Sbjct: 127 VLTVVRPEVELVCTAGDIPEKITVDLTGLNINDVVTISSVELPNGTQ--PTIDRDFVIAN 184
Query: 182 AIIPVNTLESDNNSS 196
P + D+
Sbjct: 185 ISAPTGLVTDDDEEG 199
>gi|334344483|ref|YP_004553035.1| 50S ribosomal protein L25 [Sphingobium chlorophenolicum L-1]
gi|334101105|gb|AEG48529.1| 50S ribosomal protein L25 [Sphingobium chlorophenolicum L-1]
Length = 204
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 4/202 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G SR LR+ G+VP +IYG N++P I + ++ L F +S++
Sbjct: 5 LTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLNKLLGTGHFFNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK L ++ H LHADF RV +HV VP+ F N + SP +K
Sbjct: 65 FVEVGGKKVRTLPKDVAFHPVSDRPLHADFLRVSEHATVHVNVPVVFKNEDASPGLK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + +P + ++L ++V +IH+S +KLP+G H E D T+A
Sbjct: 124 GVLNIVAHEVELIVDAAEIPDDVVVDLTGLDVGETIHISAVKLPKGAKAAHD-ETDFTVA 182
Query: 181 TAIIP--VNTLESDNNSSIEKE 200
T + P + + E DN + + E
Sbjct: 183 TIVAPSALKSAEGDNETPAQGE 204
>gi|23009667|ref|ZP_00050632.1| COG1825: Ribosomal protein L25 (general stress protein Ctc)
[Magnetospirillum magnetotacticum MS-1]
Length = 226
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 11/185 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMN----HNMIYHALKKETFHSSIL 60
A R + G +R +R+ G++P +IYGGN+ P I+++ +IY F +++
Sbjct: 9 AVARDRVGKGAARAVRRQGQIPAVIYGGNQPPQSIAIDLIRTRTLIYAG----GFKTTLF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ + GK + R+FQL + LH DF RV + + + V VP+HF+N + +P +K
Sbjct: 65 EITVGGKKTRAIPRDFQLDPVSGVPLHVDFLRVVSGQTVTVDVPVHFVNEDQAPGIKKKG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++ + L + P +P +EI+L E+ IH SD++LP G ++ E T+A
Sbjct: 125 GTLNVALHTLSLEVAPDQIPDAVEIDLAGREIGDVIHASDLRLPAGS---YTGEPTDTVA 181
Query: 181 TAIIP 185
+ P
Sbjct: 182 NILPP 186
>gi|299134267|ref|ZP_07027460.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp.
1NLS2]
gi|298591014|gb|EFI51216.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp.
1NLS2]
Length = 242
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 106/182 (58%), Gaps = 5/182 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VP +IYG NK PV IS++ + + F +++ N+++
Sbjct: 9 ATARPKAGKGAARAERRAGRVPAVIYGDNKPPVTISLDDKALRQNIFAGHFLTTLFNIDL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ V+ R++ L K LH DF R+ I V VPLH +E+SP VK +
Sbjct: 69 DGQKHRVIPRDYSLDPVKDFPLHVDFLRLGKGATIRVSVPLHVKGAEVSPGVKRGGTV-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+++ + + + +P+FIE+++ K+E+N S+HLSD++LP+GV + + +D T+ T +
Sbjct: 127 NMVNHTVELEADVEQIPQFIEVDVSKLEINNSLHLSDVQLPKGVKPV--SRDDVTLVTVV 184
Query: 184 IP 185
P
Sbjct: 185 PP 186
>gi|154252704|ref|YP_001413528.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Parvibaculum
lavamentivorans DS-1]
gi|171769611|sp|A7HVD8.1|RL25_PARL1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|154156654|gb|ABS63871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parvibaculum
lavamentivorans DS-1]
Length = 216
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 97/168 (57%), Gaps = 3/168 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A E+ KG R+LR+ G+VP +IYG + P I++++ + + TF S +L
Sbjct: 7 LKAEAREKGSKGAV--RSLRRAGRVPAVIYGDKQSPELIAVSYKDVSALYQTGTFMSHVL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++EI GK E V+ R+ Q + ++H DF R+ + V VP+HF N E SP +K
Sbjct: 65 DVEIGGKTERVIPRDVQFEPVRDFIIHVDFLRLGKNATVTVDVPVHFHNHEASPGIKAGG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
+++ V ++ + C +P+ ++I+L E+ +SIH+S +KLP VS
Sbjct: 125 -VLNIVRHEVELVCPADAIPEQLDIDLTGFEMGSSIHISAVKLPAKVS 171
>gi|414163818|ref|ZP_11420065.1| 50S ribosomal protein L25 [Afipia felis ATCC 53690]
gi|410881598|gb|EKS29438.1| 50S ribosomal protein L25 [Afipia felis ATCC 53690]
Length = 232
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 5/182 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VP +IYG NK PV IS++ + ++ F +++ N+++
Sbjct: 9 ATARPKAGKGAARAERRAGRVPAVIYGDNKPPVTISLDDKALRQSIFAGHFLTTLFNIDL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI-I 123
G+ V+ R++ L K LH DF R+ I V VPLH +E+SP VK + I
Sbjct: 69 DGQKHRVIPRDYALDPVKDFPLHVDFLRLGEGATIRVSVPLHVKGAEVSPGVKRGGTVNI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N +L +++P+FIE+++ K+E+N S+H+SD+ LP+GV + + +D T+ T +
Sbjct: 129 VNHTVELEADV--EHIPQFIEVDVSKLEINNSLHISDVALPKGVKPV--SRDDVTLVTVV 184
Query: 184 IP 185
P
Sbjct: 185 PP 186
>gi|163851898|ref|YP_001639941.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium extorquens PA1]
gi|254561616|ref|YP_003068711.1| 50S ribosomal protein L25 [Methylobacterium extorquens DM4]
gi|226736336|sp|A9W5L4.1|RL25_METEP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|163663503|gb|ABY30870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium extorquens PA1]
gi|254268894|emb|CAX24855.1| 50S ribosomal protein L25 (General stress protein CTC)
[Methylobacterium extorquens DM4]
Length = 228
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMN----HNMIYHALKKETFHSSIL 60
A R + G +R +R+ G++P +IYGGN+ P I+++ +IY F +++
Sbjct: 9 AVARDRVGKGAARAVRRQGQIPAVIYGGNQAPQAIAIDLIRARTLIYAG----GFKTTVF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ GK + R++QL + LH DF RV + + V VP+HF+N + +P +K
Sbjct: 65 EIDAGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVDVPVHFVNEDQAPGIKQKG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++ + L + P +P IE++L E+ IH SD++LP G ++ E T+A
Sbjct: 125 GTLNVALHTLSLEVAPDQIPDAIEVDLAGREIGDVIHASDLRLPAGT---YTGEPTDTVA 181
Query: 181 TAIIP 185
+ P
Sbjct: 182 NLLPP 186
>gi|148253296|ref|YP_001237881.1| 50S ribosomal protein L25 [Bradyrhizobium sp. BTAi1]
gi|146405469|gb|ABQ33975.1| LSU ribosomal protein L25P [Bradyrhizobium sp. BTAi1]
Length = 201
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 5/159 (3%)
Query: 28 IIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLH 87
+IYG N+ P+ IS+ + + F ++I ++ + GK V+ R+F L K +H
Sbjct: 1 MIYGDNQPPLPISVEDRELRQRILAGRFLTTIFDISLDGKKHRVIPRDFHLDPVKDFPIH 60
Query: 88 ADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS-DLYISCLPKNLPKFIEIN 146
DF R+ I V VPLH + SE +P VK + N+++ L + CL +N+P+FIE +
Sbjct: 61 VDFMRLGQGATIRVSVPLHVVGSEGAPGVKRGGTV--NIVTHTLDLECLAENIPQFIEAD 118
Query: 147 LEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+ +E+N S+H+SD+KLP GV + + ED T+ T + P
Sbjct: 119 VSALEINHSLHISDVKLPTGVKTL--SREDATLVTIVPP 155
>gi|347528110|ref|YP_004834857.1| 50S ribosomal protein L25 [Sphingobium sp. SYK-6]
gi|345136791|dbj|BAK66400.1| 50S ribosomal protein L25 [Sphingobium sp. SYK-6]
Length = 207
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 4/206 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G SR LR+ G+VP +IYG N++P + + ++ L F +S++
Sbjct: 5 LTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQMVHVEEKILSKLLGTGHFFNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK L ++ H LHADF RV ++HV VP+ F N E +P +K
Sbjct: 65 MVEVGGKKVRTLPKDVAFHPVTDRPLHADFLRVSEHAQVHVNVPVVFENEEAAPGLKRGG 124
Query: 121 CIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ NV+ +L + +P I ++L +V SIH+S +KLP+G T+ D TI
Sbjct: 125 VL--NVVRHELEMIVDAAEIPDSITVDLTGFDVGDSIHISAVKLPKGAEPA-ITDRDFTI 181
Query: 180 ATAIIPVNTLESDNNSSIEKEKNNNS 205
AT + P S+ +++ E E+ +
Sbjct: 182 ATIVAPSALKSSEGDTTKEGEEAGEA 207
>gi|395781885|ref|ZP_10462295.1| 50S ribosomal protein L25 [Bartonella rattimassiliensis 15908]
gi|395420327|gb|EJF86608.1| 50S ribosomal protein L25 [Bartonella rattimassiliensis 15908]
Length = 206
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 110/201 (54%), Gaps = 4/201 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R++ G SR LR+ G +P +IYG + P+ I++ + I++ + F ++I + +
Sbjct: 9 AEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLTITVPYKEIFYKIHAGGFRTTIATIVL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
+ +VL +++QL + LH DF R+ + + V +P+ F+N +I+P +K +
Sbjct: 69 DKQKIMVLPKDYQLDPVRDFPLHVDFLRISEKSFVEVNIPVRFLNEDIAPGLKKGGVL-- 126
Query: 125 NVISDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N++ P N +P+ IEI+L + SIH+S ++LP+GV+ I + D TIAT
Sbjct: 127 NIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKGVTPIIQ-DRDFTIATIA 185
Query: 184 IPVNTLESDNNSSIEKEKNNN 204
P N SD S E ++ +
Sbjct: 186 APANMDVSDGTSEQENDEGHT 206
>gi|393719169|ref|ZP_10339096.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
echinoides ATCC 14820]
Length = 214
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R++ G SR LR+ G+VP +IYG +DP I + + L F +S++
Sbjct: 5 LELAAETREQVGKGASRLLRREGRVPAVIYGNKQDPQSIHVEEKALMRLLMTGHFMNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ G+ L ++ A + +HADF R+ +HV VP+ F + E +P +K
Sbjct: 65 MIEVDGQQVRTLPKDVSFDAVTERPVHADFLRIGAHTTVHVSVPVVFTDEEEAPGIKTGK 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ + +L + C +P I I+L E+ SIH+S++ LP+GV+ T+ D TIA
Sbjct: 125 GVLNIIQHELELVCDAAEIPDDITISLAGREIGDSIHISNVTLPKGVTPA-ITDRDFTIA 183
Query: 181 TAIIP 185
T + P
Sbjct: 184 TIVPP 188
>gi|149184486|ref|ZP_01862804.1| ribosomal protein L25 [Erythrobacter sp. SD-21]
gi|148831806|gb|EDL50239.1| ribosomal protein L25 [Erythrobacter sp. SD-21]
Length = 230
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R++ G SR LR+ G+VP +IYGG ++P+ I + + L F +SI+
Sbjct: 5 LTLPAETRERAGKGASRALRRDGRVPAVIYGGKEEPILIHVEAKELVKQLGTGHFMNSIV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK L ++ LH H DF R+ KI V+VP+ F N E SP +K
Sbjct: 65 TIELGGKKIKTLPKDVSLHPVNDRPEHVDFFRMVKGGKIEVQVPVVFTNEEASPGLK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V +L + C +P IEI++ EV SIH+S++KLP G S T+ D TIA
Sbjct: 124 GVLNVVRHELDLVCENDKIPSEIEIDVTGKEVGDSIHISEVKLPAG-SESAITDRDFTIA 182
Query: 181 TAIIP 185
T + P
Sbjct: 183 TLVAP 187
>gi|403049128|ref|ZP_10903612.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86D]
Length = 235
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 1/180 (0%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R++ G++ +R +RK+ G VP I+YG K+ + + + N + A + E F++ +L ++
Sbjct: 9 AETRERTGSNKARVIRKVDGMVPAIVYGDEKESLNLKLYLNELTKASQNELFYTQVLLIK 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
E V+L+ Q K LHADFQRV + K+ V +P++FIN + VK + +I
Sbjct: 69 NGDLEEKVVLKELQRDPAKGKFLHADFQRVSRKTKLKVIIPMNFINEDECVGVKNDGGLI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+ I ++ I CL N+P+ I++++ +E+ SI L+++ LP G + TEE + ++
Sbjct: 129 TKAIREVEIMCLAGNIPESIDVDVTDLELGASIRLTEVALPEGSEIPGLTEETDQMVVSV 188
>gi|326796206|ref|YP_004314026.1| 50S ribosomal protein L25 [Marinomonas mediterranea MMB-1]
gi|326546970|gb|ADZ92190.1| 50S ribosomal protein L25 [Marinomonas mediterranea MMB-1]
Length = 192
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R ++G SR LRK G VP +IYGG + ++ +N + A+ F +S++ +
Sbjct: 5 IEAAPRSEEGKGASRRLRKQGLVPAVIYGGETEAQSVTFKNNELVKAVANVAFLTSVVEV 64
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+ G + VL+++ Q H V+H D R+ +K I ++PL F+N+E S VK
Sbjct: 65 SVDGAAQKVLVKSLQRHPSTGDVMHVDLLRIAEDKTIATRIPLEFVNAEKSEGVKAQGGR 124
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+S + CLPK+LP + ++ ++ HLSD +LP GV ++
Sbjct: 125 LSVEAKLAEVRCLPKDLPASLIVDAIDGQLGQIFHLSDAQLPEGVELV 172
>gi|407784048|ref|ZP_11131235.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibaculum
indicum P24]
gi|407198596|gb|EKE68628.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibaculum
indicum P24]
Length = 207
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G +R R+ G VPG+IYG + PV I++N + L++ F + + +++
Sbjct: 12 RDRAGKGAAREARRQGLVPGVIYGDKQSPVMINLNAKELERQLRRPGFFNHLFEVKVGKD 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL R Q LH DF RV +I V VP+HFIN SP +K +++ V
Sbjct: 72 THRVLARELQQDPVTDRALHVDFLRVSKNSRIEVAVPVHFINETKSPGLK-RGGVLNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
++ + C P+ +P+ + I+L +V SIH+S + LP GV V T+ D T+AT P
Sbjct: 131 HEVEVFCSPEAIPEELVIDLTGWDVGDSIHISAVTLPDGV-VPTITDRDFTVATIAAP 187
>gi|323136056|ref|ZP_08071139.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis
sp. ATCC 49242]
gi|322399147|gb|EFY01666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis
sp. ATCC 49242]
Length = 209
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 104/192 (54%), Gaps = 5/192 (2%)
Query: 1 MKIIAFE-RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
MK +A R G +R++R+ G++P ++YGG + P+ IS++ + + F ++I
Sbjct: 4 MKTLAATVRSGTGKGAARSVRREGRIPAVLYGGGEAPLPISLDKKVTTQLIFAGHFLTTI 63
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L+I GK E + R++QL K LH DF R+ ++ V VP+HFIN + +P +K
Sbjct: 64 FELDIDGKKERAIPRDYQLDVVKDFPLHVDFLRLKPGSRLKVNVPVHFINQDAAPGIKRG 123
Query: 120 SCIISNVISDLYISCLPK-NLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
+ N++ +P N+P+ I +L M+ N S+H+S I LP G + +++ T
Sbjct: 124 GSL--NIVYHTVEMWVPADNIPEAITADLAGMDFNDSLHISAIPLPEGCKPTNP-DKNFT 180
Query: 179 IATAIIPVNTLE 190
+A+ P +E
Sbjct: 181 VASLAPPAGGVE 192
>gi|218530649|ref|YP_002421465.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium extorquens CM4]
gi|240139021|ref|YP_002963496.1| 50S ribosomal protein L25 [Methylobacterium extorquens AM1]
gi|418058619|ref|ZP_12696589.1| 50S ribosomal protein L25 [Methylobacterium extorquens DSM 13060]
gi|254801054|sp|B7KNU8.1|RL25_METC4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|218522952|gb|ACK83537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium extorquens CM4]
gi|240008993|gb|ACS40219.1| 50S ribosomal protein L25 (General stress protein CTC)
[Methylobacterium extorquens AM1]
gi|373567858|gb|EHP93817.1| 50S ribosomal protein L25 [Methylobacterium extorquens DSM 13060]
Length = 228
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMN----HNMIYHALKKETFHSSIL 60
A R + G +R +R+ G++P +IYGGN+ P I+++ +IY F +++
Sbjct: 9 AVARDRVGKGAARAVRRQGQIPAVIYGGNQAPQAIAIDLIRARTLIYAG----GFKTTVF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ GK + R++QL + LH DF RV + + V VP+HF+N + +P +K
Sbjct: 65 EIDAGGKKTRAIPRDYQLDPVSGVPLHVDFLRVVAGQTVTVDVPVHFVNEDQAPGIKQKG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++ + + + P +P IE++L E+ IH SD++LP G ++ E T+A
Sbjct: 125 GTLNVALHTVSLEVAPDQIPDAIEVDLAGREIGDVIHASDLRLPAGT---YTGEPTDTVA 181
Query: 181 TAIIP 185
+ P
Sbjct: 182 NLLPP 186
>gi|393765881|ref|ZP_10354441.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium sp. GXF4]
gi|392728773|gb|EIZ86078.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium sp. GXF4]
Length = 228
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMN----HNMIYHALKKETFHSSIL 60
A R + G +R +R+ G+VP ++YGG + P I+++ +IY F +++
Sbjct: 9 AVARDRVGKGAARAVRRQGQVPAVVYGGGQPPQSIAIDLVRARTLIYAG----GFKTTLF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ GK + R+FQL + LH DF RV + + + V+VP+HFIN +P +K
Sbjct: 65 EIKAGGKTVRAIPRDFQLDPVSGVPLHVDFLRVVSGQTVTVEVPVHFINEAAAPGIKKLG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++ V L + P +P IE++L E+ IH++DIK+P G H+ E +A
Sbjct: 125 GTLNIVAHTLTLEVAPDQIPDAIEVDLTGREIGDVIHVADIKIPAGS---HTGEPTDPVA 181
Query: 181 TAIIP 185
+ P
Sbjct: 182 NIVPP 186
>gi|126735034|ref|ZP_01750780.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter
sp. CCS2]
gi|126715589|gb|EBA12454.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter
sp. CCS2]
Length = 221
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G VPGI+YGG DP I + N + L+K F S++ NL+I G+
Sbjct: 13 RAGTGKGAARQARRDGDVPGIVYGGGADPQSIIIPFNYLLTKLRKGGFMSTLHNLKIEGE 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V+ R Q K L H D R+ ++++ +P+ F+N+E P VK +++ V
Sbjct: 73 EDVRVICRGVQRDVVKDLPTHIDLMRLKRTSRVNIFIPVEFLNAETCPGVK-KGGVLTVV 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
+++ ++ L ++P+ IEI+L ++E+ +I +SD+ LP G +
Sbjct: 132 RNEVELNVLAGDIPEHIEIDLTEVEIGDTISISDVTLPEGAT 173
>gi|452751105|ref|ZP_21950851.1| LSU ribosomal protein L25p [alpha proteobacterium JLT2015]
gi|451961255|gb|EMD83665.1| LSU ribosomal protein L25p [alpha proteobacterium JLT2015]
Length = 223
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M I A R+K G SR +R G+VP +IYG K+P+ I + ++ L F SS++
Sbjct: 5 MTIAAQLREKAGKGASRAMRNEGRVPAVIYGDKKEPISIHVEEKVLRKLLNTGHFLSSVV 64
Query: 61 NLEIYGKVE-LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+E+ G E L ++ QLH +H DF R+ +KI V VP++F + SP +
Sbjct: 65 MVEVEGGEEHRTLPKDVQLHPVTDRPMHVDFMRLAKGQKIAVNVPMNFEGEDDSPGLT-R 123
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+++ V ++ + C P +P + ++L+ +E+ SIH+S ++LP GV V + D T+
Sbjct: 124 GGVLNIVRHEVEVHCRPSLIPSELTVSLKGLEIGDSIHISQVELPEGVEV-DWGDHDFTV 182
Query: 180 ATAIIP 185
AT + P
Sbjct: 183 ATIVAP 188
>gi|163867941|ref|YP_001609145.1| 50S ribosomal protein L25 [Bartonella tribocorum CIP 105476]
gi|189042346|sp|A9IR85.1|RL25_BART1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161017592|emb|CAK01150.1| 50S ribosomal protein L25 [Bartonella tribocorum CIP 105476]
Length = 209
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 4/201 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R++ G SR LR+ G +P +IYG + P+ I++ + I++ + F ++I + +
Sbjct: 9 AEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGFRTTIATIVL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
+ +VL +++QL + LH DF R+ + + V +P+HF+N + +P +K +
Sbjct: 69 DKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVL-- 126
Query: 125 NVISDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N++ P N +P+ IEI+L + SIH+S ++LP+ V+ I + D TIAT
Sbjct: 127 NIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVTPIIQ-DRDFTIATIA 185
Query: 184 IPVNTLESDNNSSIEKEKNNN 204
P + SD S EK++
Sbjct: 186 APASLDVSDETSEQEKDEGET 206
>gi|226226624|ref|YP_002760730.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27]
gi|226089815|dbj|BAH38260.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27]
Length = 208
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 7/197 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R +R+ G +P +IYG ++P ++ N +K S+++ L I
Sbjct: 8 ATARVETGKGAARKIRQAGNIPSVIYGHGREPQSLTTNARETERLIKSIAVSSTVIELNI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK L+R Q H +K+ +LH DFQ + + + VK P+ +I + V+L I+
Sbjct: 68 DGKTARTLIREIQRHPFKRSILHIDFQELVAGETVSVKCPIVYIGT--PEGVRLEGGILD 125
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
++ +L+I P ++P I++++ +++ S+H++D+KLP G+ V+ +D T ++
Sbjct: 126 QIMHELHIQVDPASIPNHIDVDISGVKLGKSLHVADLKLPAGIKVL----DDATATVCVV 181
Query: 185 -PVNTLESDNNSSIEKE 200
P E + + E E
Sbjct: 182 QPPKVQEEKADGAAEPE 198
>gi|163794565|ref|ZP_02188536.1| branched-chain amino acid aminotransferase [alpha proteobacterium
BAL199]
gi|159180289|gb|EDP64812.1| branched-chain amino acid aminotransferase [alpha proteobacterium
BAL199]
Length = 209
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R R+ G VP +IYG +DPV I++ + L K F S +L++++
Sbjct: 9 ASARDRAGKGSARAARREGLVPAVIYGDKQDPVSINLTLRELEKLLTKPGFFSHLLDIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G VL R+ Q H LH DF RV ++ V VP+ F N E SP ++ +
Sbjct: 69 AGTKHRVLPRDLQQHPVSDKPLHVDFLRVSASSELTVDVPVEFENDEASPGLRRGGVL-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
NV+ + + C ++P+ I I+L +++ S+H+S + LP GV T ED A
Sbjct: 127 NVVRHSVEVYCRADSIPEKITIDLTGLQIGDSVHISAVTLPEGV---RPTIEDRDFTIAT 183
Query: 184 IPVNTLES 191
I TL+S
Sbjct: 184 IAAPTLKS 191
>gi|94498282|ref|ZP_01304842.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas
sp. SKA58]
gi|94422284|gb|EAT07325.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas
sp. SKA58]
Length = 208
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 2/200 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G SR LR+ G+VP +IYG N++P I + ++ L F +S++
Sbjct: 5 LTLSAEARDRAGKGASRALRREGRVPAVIYGNNEEPQSIHVEEKLLSKLLGTGHFFNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK L ++ H LHADF RV ++V VP+ F N + +P +K
Sbjct: 65 MVEVNGKAVRTLPKDVAFHPVTDRPLHADFLRVSEHATVNVNVPVRFENEDAAPGLK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V D+ + N+P+ + ++L+ EV SIH+S + LP+G + D TIA
Sbjct: 124 GVLNVVRHDVELIVDAANIPEDVVVDLKGFEVGDSIHISAVTLPKGAKTAID-DRDFTIA 182
Query: 181 TAIIPVNTLESDNNSSIEKE 200
T + P S+ +++ E E
Sbjct: 183 TIVAPSALKSSEGDTTKEDE 202
>gi|395778447|ref|ZP_10458959.1| 50S ribosomal protein L25 [Bartonella elizabethae Re6043vi]
gi|423715242|ref|ZP_17689466.1| 50S ribosomal protein L25 [Bartonella elizabethae F9251]
gi|395417655|gb|EJF83992.1| 50S ribosomal protein L25 [Bartonella elizabethae Re6043vi]
gi|395430078|gb|EJF96129.1| 50S ribosomal protein L25 [Bartonella elizabethae F9251]
Length = 209
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 110/200 (55%), Gaps = 4/200 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R++ G SR LR+ G +P +IYG + P+ I++ + I++ + F ++I + +
Sbjct: 9 AEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGFRTTIATIVL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
+ +VL +++QL + LH DF R+ + + V +P+HF+N + +P +K +
Sbjct: 69 DKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGIKKGGVL-- 126
Query: 125 NVISDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N++ P N +P+ IEI+L + SIH+S ++LP+ V+ I + D TIAT
Sbjct: 127 NIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVTPIIQ-DRDFTIATIA 185
Query: 184 IPVNTLESDNNSSIEKEKNN 203
P + +D S EK+++
Sbjct: 186 APASLDITDETSEQEKDEDE 205
>gi|357385214|ref|YP_004899938.1| 50S ribosomal protein L25 [Pelagibacterium halotolerans B2]
gi|351593851|gb|AEQ52188.1| LSU ribosomal protein L25p [Pelagibacterium halotolerans B2]
Length = 209
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 100/179 (55%), Gaps = 4/179 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G +R LR+ G VP +IYG K P+ I++++ + + F S ++ +++ G
Sbjct: 10 RDRVGKGAARELRRQGLVPAVIYGDKKAPLSIAISYKDTFRKIHDGGFLSHVIEIDVDGD 69
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+ +++QL + ++H DF RV + V+VP+HF N E SP +K + NV+
Sbjct: 70 KHRVIPKDYQLEPVRDFLVHVDFLRVGKNSTLTVEVPVHFENQEKSPGLKKGGVL--NVV 127
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+P + +P+++ ++L K EV S+H+S + LP+GV V T+ D TIAT P
Sbjct: 128 RHTVEVTVPADSIPEYLVVDLSKSEVGDSLHISAVDLPKGV-VPTITDRDFTIATIAAP 185
>gi|329851267|ref|ZP_08266024.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19]
gi|328840113|gb|EGF89685.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19]
Length = 198
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ GT +R R GK+PG++YGG+K PV I++N N +L + ++ L+ +
Sbjct: 11 RERTGTGGARATRNDGKLPGVLYGGDKGPVPIAVNLNAFRKSLSTGKLNGHLVTLKYGEE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV- 126
+ V+ ++ H + +H D RVD KI + VP+HF N E+SP +K + NV
Sbjct: 71 TQKVIAKSIDFHPVTDVPVHFDLFRVDEHAKIRISVPVHFKNHELSPGLKKGGAL--NVA 128
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+L I ++P+ I I+L +E+ S+H+SD+KLP VS +
Sbjct: 129 FHELEIQVPADHIPEDIIIDLTGLEIGQSVHISDLKLPSDVSPV 172
>gi|451942267|ref|YP_007462904.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901654|gb|AGF76116.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 208
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G S LR+ G +P IIYG + P+ I++ + I++ + F ++I L I +
Sbjct: 12 RERVGKGSSSELRRNGLIPAIIYGEKQPPLAITVPYKEIFYKIHAGGFRTTIATLVIGKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + LH DF R+ + + V +P+HF+N + +P +K + N++
Sbjct: 72 KITVLPKDYQLDPVRDFPLHVDFLRISEKSVVEVNIPVHFLNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ IEI+L + SIH+S ++LP GV+ + + D TIAT P
Sbjct: 130 RHEIECTAPANAIPEAIEIDLASYSIGDSIHISAVQLPEGVTPVIQ-DRDFTIATIAAPA 188
Query: 187 NTLESDNNSSIEKEKNNN 204
D E E+NN+
Sbjct: 189 GLDIGDEAPEQENEENND 206
>gi|57238823|ref|YP_179959.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia
ruminantium str. Welgevonden]
gi|68053024|sp|Q5FFA2.2|RL25_EHRRG RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053028|sp|Q5HC84.1|RL25_EHRRW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|57160902|emb|CAH57807.1| putative 50S ribosomal protein L25 [Ehrlichia ruminantium str.
Welgevonden]
Length = 208
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 8/197 (4%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ A R GT SR LR+ G +P ++YG ++ P+ I ++ + + ++
Sbjct: 7 VKMNAELRNSVGTGPSRTLRRNGAIPAVVYGKHRSPLSIYLSDREFLSKYRSAALSTHLI 66
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LEI K E VL+R+ Q H + H DFQ +D +I ++VPL F+N + VK
Sbjct: 67 ELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGVKKGG 126
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N++ L+I CLP + + IE++L + + SIH+SD+ LP V+V+ E +PT+
Sbjct: 127 VL--NILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMK-EHNPTL 183
Query: 180 ATAIIPVNTLESDNNSS 196
T ++ SD ++S
Sbjct: 184 VT----ISGTSSDQDTS 196
>gi|118603027|ref|YP_904242.1| 50S ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166223716|sp|A1AXW4.1|RL25_RUTMC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|118567966|gb|ABL02771.1| LSU ribosomal protein L25P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 222
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 99/176 (56%), Gaps = 1/176 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R +G S LR+ K+P I+YG K P I+++ I L+ E ++S+L
Sbjct: 3 LTINALTRDDQGKGASHRLRRNHKIPAIVYGTGKAPRNITLDVFEITRLLENEESYTSVL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L + K E V++++ Q H K +V H DF R++ ++ I VPLHF E + A++L
Sbjct: 63 DLIVDKKKEAVIIKDLQRHPAKNIVTHVDFLRINLKQAIVTSVPLHFNGEENNEAMRL-G 121
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
I++ ++ + +SCLP +LP I++++ + + I + + +P+GV + T D
Sbjct: 122 AILNQFVTSVEVSCLPTDLPHAIDVDISNLTMGEHISFTGLNIPKGVVITALTHGD 177
>gi|58578753|ref|YP_196965.1| 50S ribosomal protein L25 [Ehrlichia ruminantium str. Welgevonden]
gi|58616812|ref|YP_196011.1| 50S ribosomal protein L25 [Ehrlichia ruminantium str. Gardel]
gi|58416424|emb|CAI27537.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str.
Gardel]
gi|58417379|emb|CAI26583.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str.
Welgevonden]
Length = 219
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 8/197 (4%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ A R GT SR LR+ G +P ++YG ++ P+ I ++ + + ++
Sbjct: 18 VKMNAELRNSVGTGPSRTLRRNGAIPAVVYGKHRSPLSIYLSDREFLSKYRSAALSTHLI 77
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LEI K E VL+R+ Q H + H DFQ +D +I ++VPL F+N + VK
Sbjct: 78 ELEIGEKKEYVLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGVKKGG 137
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N++ L+I CLP + + IE++L + + SIH+SD+ LP V+V+ E +PT+
Sbjct: 138 VL--NILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMK-EHNPTL 194
Query: 180 ATAIIPVNTLESDNNSS 196
T ++ SD ++S
Sbjct: 195 VT----ISGTSSDQDTS 207
>gi|110634506|ref|YP_674714.1| 50S ribosomal protein L25/general stress protein Ctc [Chelativorans
sp. BNC1]
gi|123057768|sp|Q11GC6.1|RL25_MESSB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|110285490|gb|ABG63549.1| LSU ribosomal protein L25P [Chelativorans sp. BNC1]
Length = 210
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
++ A R++ G +R +R+ GK+P +IYG + P+ I++ + ++ + F +++
Sbjct: 6 ELTAEARERVGKGSARAIRRNGKIPAVIYGDKQPPLSITLPYKEVFLRIHAGGFRTTVAT 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+++ G+ VL +++QL + +H DF RV + V VP+HFIN E +P +K
Sbjct: 66 IDLNGEKIQVLPKDYQLDPVRGFAMHVDFLRVGKNTVVTVNVPVHFINDEKAPGIK-RGG 124
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+++ V ++ +C +P FIE++L +++ S+H+S +KLP G+ V T+ D TIAT
Sbjct: 125 VLNIVRHEVEFTCPANAIPDFIEVDLTGLDIGDSVHISAVKLPEGI-VPTITDRDFTIAT 183
Query: 182 AIIPVN 187
P
Sbjct: 184 VAAPAG 189
>gi|395767352|ref|ZP_10447887.1| 50S ribosomal protein L25 [Bartonella doshiae NCTC 12862]
gi|395414665|gb|EJF81107.1| 50S ribosomal protein L25 [Bartonella doshiae NCTC 12862]
Length = 206
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++ + +++ + F +++ + + +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAIPYKEVFYKIHAGGFRTTVATIAVGKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + +H DF R+ + + V +P+HF+N EI+P +K +++ V
Sbjct: 72 KISVLPKDYQLDPVRDFPMHVDFLRISAKSIVDVNIPVHFLNEEIAPGIK-QGGVLNIVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVN 187
++ + L +P+ IEI+L + SIH+S ++LP+GV+ + + D TIAT P
Sbjct: 131 HEIECTALANAIPEAIEIDLSNCSIGDSIHISAVQLPQGVTPV-IQDRDFTIATIAAPAG 189
>gi|260427669|ref|ZP_05781648.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45]
gi|260422161|gb|EEX15412.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45]
Length = 206
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A ER G +R R+ G VPGI++GG+ +P+ I M N + H LK F ++ NL
Sbjct: 8 LVALERSGTGKGAARQARRDGMVPGILFGGDAEPLAIQMPFNKMLHQLKAGRFKQTLFNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G ++ V+ R+ Q K L H D R+ +I++ + + FIN E +P +K
Sbjct: 68 KVEGHDDVRVICRDVQRDVVKDLPTHFDLMRLRRTTRINLFIHVDFINEEKAPGLK-RGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+++ V ++ ++ L ++P I ++LE ++ IH+SD+ LP GV
Sbjct: 127 VLTIVRQEVELNVLAGDIPDHITVDLEGKQIGDVIHISDVTLPEGV 172
>gi|340028517|ref|ZP_08664580.1| 50S ribosomal protein L25/general stress protein Ctc [Paracoccus
sp. TRP]
Length = 207
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A R G +R R+ GKVPGI+YG K+P I++ N + L+ F S++ NL
Sbjct: 8 LVAEARTGTGKGAARQARREGKVPGIVYGDGKEPQPIALEFNYLLTKLRAGRFMSTLWNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G+ ++ V+ R Q K L H DF RV ++++ + +HF N E +P +K
Sbjct: 68 KVEGQEDVRVVCRGVQRDVVKDLPTHIDFMRVHRNTRVNLFINVHFENHEQAPGLKRGGT 127
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
++ V ++ + ++P+ I ++L E+ SIH++D++LPRGV + + + IA
Sbjct: 128 LVV-VRPEVELMVTASDIPEQITVDLTGREIGESIHINDVQLPRGVK--PTIDRNFVIAN 184
Query: 182 AIIPVNTLESDN 193
P SDN
Sbjct: 185 IAAPSGLRSSDN 196
>gi|126727672|ref|ZP_01743504.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodobacterales bacterium HTCC2150]
gi|126703088|gb|EBA02189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodobacterales bacterium HTCC2150]
Length = 217
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 3/179 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G VPG +YGG +DP+ I + N ++ LK F +++ NL+I G+
Sbjct: 13 RTGTGKGAARQSRRDGNVPGTVYGGGQDPIAIEIPFNALFKRLKAGRFLATLFNLKIEGQ 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V+ R+ Q K L +H D R+ + ++ + + + FIN E SP + ++ V
Sbjct: 73 EDVRVVCRDVQRDKVKDLPIHLDLMRLRRDSRVAMSITVEFINHEESPGLANQGGSLNTV 132
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
++ +S + ++P I ++L + V +I +SDI LP+G + E D IAT P
Sbjct: 133 RPEVELSVIASDIPDHITVDLAGLNVGATISISDIDLPKGAE--PTIERDFIIATIAAP 189
>gi|402548558|ref|ZP_10845411.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86C]
gi|402548859|ref|ZP_10845712.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86C]
Length = 229
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 99/172 (57%), Gaps = 1/172 (0%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R++ G++ +R +RK+ G +P IIYG KD + I + N + A + E F++ +L ++
Sbjct: 9 ADSRERTGSNKARVIRKVDGMIPAIIYGDEKDSLNIKLKLNELTKASQNELFYTQVLIIK 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
E V+L+ Q K LHADF RV + K+ V +P++F+N E VK ++
Sbjct: 69 NGDLEEKVVLKELQKDPAKGKFLHADFLRVSRKTKLKVIIPINFLNEEECAGVKNEGGVL 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
+ I ++ + CL N+P+ I+I++ +++ S+ L++I LP G + TEE
Sbjct: 129 NKTIREVEVMCLAGNIPESIDIDVTALDLGQSVRLTEINLPDGAEIPGLTEE 180
>gi|296446566|ref|ZP_06888508.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus
trichosporium OB3b]
gi|296255920|gb|EFH03005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus
trichosporium OB3b]
Length = 227
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ A R G +R++R+ G++PG+IYGG P +S++ + + F ++I
Sbjct: 6 KLAAAVRSGTGKGAARSVRREGRIPGVIYGGGDAPTPLSLDQKELTKLIYAGHFLTTIFE 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L+I GK E + R++QL K LH DF R+ ++ + VP+HFIN E SP +K
Sbjct: 66 LDIDGKTERAIPRDYQLDVVKDTPLHVDFLRLRAGSRLRIDVPVHFINHEASPGLKRGGS 125
Query: 122 IISNVISDLYISCLPK-NLPKFIEINLEKMEVNTSIHLSDIKLP 164
+ NV+ +P N+P I +L +E N ++H+S LP
Sbjct: 126 L--NVVYHSVEMWVPADNIPDGITGDLTGLEFNDALHISAFTLP 167
>gi|78042985|ref|YP_359067.1| 50S ribosomal protein L25 [Carboxydothermus hydrogenoformans
Z-2901]
gi|109893351|sp|Q3AFL7.1|RL25_CARHZ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77995100|gb|ABB13999.1| ribosomal protein L25 [Carboxydothermus hydrogenoformans Z-2901]
Length = 197
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 101/187 (54%), Gaps = 18/187 (9%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMN----HNMIYHALKKETFHS 57
KI A R KK L K GKVPG++YG N +PV +++N +++ LK
Sbjct: 3 KITASVRLKKTRGERNRLLKEGKVPGVMYGKNIEPVAVAVNARELESLVERGLK------ 56
Query: 58 SILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVK 117
+ L + GK + VL++ Q H ++H DFQ V++ +KI VP+ PA
Sbjct: 57 -LFELSVEGKTQRVLVKELQHHPVTGKLIHVDFQVVESGRKIRQLVPVELYGE---PAGV 112
Query: 118 LNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP 177
I+ + +S++ + CLP++LP+FIE ++ K+EV + + D++LP GV VI EDP
Sbjct: 113 KAGGILEHGLSEVTVECLPEDLPEFIEADVSKLEVGDCLRVKDLELPPGVRVI----EDP 168
Query: 178 TIATAII 184
A+I
Sbjct: 169 ESIIALI 175
>gi|378826775|ref|YP_005189507.1| 50S ribosomal protein L25 [Sinorhizobium fredii HH103]
gi|365179827|emb|CCE96682.1| 50S ribosomal protein L25 [Sinorhizobium fredii HH103]
Length = 203
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 104/178 (58%), Gaps = 4/178 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I+++ + + F +++ +++
Sbjct: 9 AETRERVGKGSSRELRRNGLIPAVIYGDKQAPLSITLSTKEVTMKIHAGGFMTTVATIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VL +++QL + +H DF RV ++ V+VP+HF N E SP +K +
Sbjct: 69 NGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGTL-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N++ ++ ++ N+P+F+ ++L +++ ++H+SD+KLP G + + + + D T+AT
Sbjct: 127 NIVRHEVELNVSADNIPEFLSVDLSGLKIGDTVHISDVKLPAGATPVIA-DRDFTVAT 183
>gi|402771718|ref|YP_006591255.1| 50S ribosomal protein L25 [Methylocystis sp. SC2]
gi|401773738|emb|CCJ06604.1| 50S ribosomal protein L25 [Methylocystis sp. SC2]
Length = 216
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 3/166 (1%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ A R G +R++R+ G++P ++YGG + P +S+ + + F ++I
Sbjct: 11 KLAATVRSGTGKGAARSVRREGRIPAVLYGGGEAPQPLSLEKKSLSQLIFAGHFLTTIFE 70
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L+I GK E + R++QL K +H DF R+ ++ V+VP+HF N E +P +K
Sbjct: 71 LDIDGKKERAIPRDYQLDVIKDTPMHVDFLRLKPGSRLRVQVPVHFTNQEAAPGIKRGGA 130
Query: 122 IISNVISDLYISCLPK-NLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+ N++ +P N+P+ I +L M+ N S+H+S I LP G
Sbjct: 131 L--NIVYHTVEMWVPADNIPEAITADLTGMDFNDSLHISAIPLPEG 174
>gi|227822859|ref|YP_002826831.1| 50S ribosomal protein L25 [Sinorhizobium fredii NGR234]
gi|227341860|gb|ACP26078.1| 50S ribosomal protein L25 [Sinorhizobium fredii NGR234]
Length = 228
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 104/178 (58%), Gaps = 4/178 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I+++ + + F +++ +++
Sbjct: 34 AETRERVGKGSSRELRRNGLIPAVIYGDKQAPLSIALSTKEVTMKIHAGGFMTTVATIDV 93
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VL +++QL + +H DF RV ++ V+VP+HF N E SP +K +
Sbjct: 94 NGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGTL-- 151
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N++ ++ ++ N+P+F+ ++L +++ ++H+SD+KLP G + + + + D T+AT
Sbjct: 152 NIVRHEVELNVSADNIPEFLSVDLSGLKIGDTVHISDVKLPAGATPVIA-DRDFTVAT 208
>gi|209886302|ref|YP_002290159.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM5]
gi|337740154|ref|YP_004631882.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM5]
gi|386029171|ref|YP_005949946.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM4]
gi|226736343|sp|B6JIP4.1|RL25_OLICO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|209874498|gb|ACI94294.1| ribosomal protein L25, Ctc-form [Oligotropha carboxidovorans OM5]
gi|336094239|gb|AEI02065.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM4]
gi|336097818|gb|AEI05641.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM5]
Length = 240
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VP +IYG NK PV IS++ + ++ F +++ N+++
Sbjct: 9 ATARPKAGKGAARAERRAGRVPAVIYGDNKPPVTISLDDKALRQSIFAGHFLTTLFNIDL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI-I 123
G+ V+ R++ L K LH DF R+ I V VPLH +E+SP VK + I
Sbjct: 69 DGQKYRVIPRDYALDPVKDFPLHVDFLRLGEGATIRVSVPLHVKGAELSPGVKRGGTVNI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N +L ++P+FIE+++ K+E+N S+HL+D+ LP+GV + E T+ T +
Sbjct: 129 VNHTVELEAEV--DHIPQFIEVDVSKLEINNSVHLNDVALPKGVKPV--LREGMTLVTVV 184
Query: 184 IP 185
P
Sbjct: 185 PP 186
>gi|154246548|ref|YP_001417506.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthobacter
autotrophicus Py2]
gi|226694603|sp|A7IIK6.1|RL25_XANP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|154160633|gb|ABS67849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xanthobacter
autotrophicus Py2]
Length = 203
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 100/182 (54%), Gaps = 5/182 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R R+ G+VP +IYG ++PV IS+N I + F +++ +++
Sbjct: 9 AVARPRAGKGAARAERRAGRVPAVIYGEKQEPVTISLNFREINKTIYAGHFLTTLFEIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V+ R++QL K LH DF RV + V+VP+HF+N E SPA+K +
Sbjct: 69 DGTKHRVIPRDYQLDVVKDFPLHVDFLRVSQGATVTVEVPVHFLNQEASPALKAGGTL-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
NV++ + + C +++P +E++L + HLS IKLP GV+ + D T+AT +
Sbjct: 127 NVVAHAVELECPAESIPASVEVDLTGAAYGDTFHLSGIKLPAGVT--WAGHGDDTLATVV 184
Query: 184 IP 185
P
Sbjct: 185 AP 186
>gi|170750343|ref|YP_001756603.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium radiotolerans JCM 2831]
gi|226736338|sp|B1LZ78.1|RL25_METRJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170656865|gb|ACB25920.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium radiotolerans JCM 2831]
Length = 227
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMN----HNMIYHALKKETFHSSIL 60
A R + G +R +R+ G++P +IYGG + P I+++ +IY F +++
Sbjct: 9 AVARDRVGKGAARAVRRQGQIPAVIYGGGQPPQSIAVDLIRTRTLIYAG----GFKTTLF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ GK + R+FQL + LH DF RV + + + V+VP+HF+N + +P +K
Sbjct: 65 EINAGGKKVRAIPRDFQLDPVTGVPLHVDFLRVVSGQTVTVEVPVHFVNEDAAPGIKKLG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
++ V L + P +P IE++L + IH+SDIK+P G +T+
Sbjct: 125 GTLNIVAHTLSLEVAPDQIPDAIEVDLTGRAIGDVIHVSDIKIPAGTYTGEATD 178
>gi|90422926|ref|YP_531296.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris BisB18]
gi|109893388|sp|Q219F9.1|RL25_RHOPB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|90104940|gb|ABD86977.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB18]
Length = 240
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 97/167 (58%), Gaps = 5/167 (2%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKL 84
VPG+IYG NK PV IS++ + + F ++I ++E+ G+ V+ R+F L +
Sbjct: 29 VPGVIYGDNKPPVTISVDDTELRARILAGRFLTTIFDVELDGQKHRVIPRDFHLDPVRDF 88
Query: 85 VLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS-DLYISCLPKNLPKFI 143
+H DF R+ I V VPLH N+E +P VK + N+++ + + +++P+FI
Sbjct: 89 PIHVDFLRLGEGALIRVSVPLHLKNAEGAPGVKRGGTV--NIVTHTVELEAEAESIPQFI 146
Query: 144 EINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVNTLE 190
E ++ ++++ +S+HLSD+ LP+GV + + ED T+ T + P E
Sbjct: 147 EADVSQLDIGSSLHLSDVVLPKGVKTL--SREDLTLVTIVPPSGYAE 191
>gi|398354514|ref|YP_006399978.1| 50S ribosomal protein L25 [Sinorhizobium fredii USDA 257]
gi|390129840|gb|AFL53221.1| 50S ribosomal protein L25 [Sinorhizobium fredii USDA 257]
Length = 204
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 103/178 (57%), Gaps = 4/178 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I ++ + + F +++ L++
Sbjct: 9 AETRERVGKGSSRELRRNGLIPAVIYGDKQAPLSIVLSTKEVTMKIHAGGFMTTVATLDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VL +++QL + +H DF RV ++ V+VP+HF N E SP +K +
Sbjct: 69 NGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGTL-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N++ ++ ++ N+P+F+ ++L +++ ++H+SD+KLP G + + + + D T+AT
Sbjct: 127 NIVRHEVELNVSADNIPEFLTVDLSGLKIGDTVHISDVKLPAGATPVIA-DRDFTVAT 183
>gi|298292447|ref|YP_003694386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya
novella DSM 506]
gi|296928958|gb|ADH89767.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya
novella DSM 506]
Length = 212
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VP +IYG K PV I+++H I + F +++ N+++
Sbjct: 9 ATARAKVGKGAARAERRAGRVPAVIYGDGKAPVGITLDHVEINKIIYAGHFLTTLFNVDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC--I 122
G+ V+ R++QL K LH DF RV + V VP+HF+N E +PA+K I
Sbjct: 69 DGQKHRVIPRDYQLDPVKDFPLHVDFLRVAVGATLTVDVPVHFLNQETAPALKQGGTLNI 128
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+S+ +S ++ + +P+ IE++L K SIHLS IKLP GV+ + D T+AT
Sbjct: 129 VSHAVS---LNVPAEAIPEAIEVDLTKYGFGDSIHLSAIKLPAGVT--WAGHGDDTLATI 183
Query: 183 IIP 185
P
Sbjct: 184 TAP 186
>gi|114797515|ref|YP_760114.1| 50S ribosomal protein L25/general stress protein Ctc [Hyphomonas
neptunium ATCC 15444]
gi|114737689|gb|ABI75814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomonas
neptunium ATCC 15444]
Length = 219
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 4/175 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ GT +R R G VPG++YGG DPV IS+ N + A++ F S+ L G+
Sbjct: 13 RERTGTGGAREARNNGFVPGVLYGGGIDPVAISLKKNEVIKAIETGHFLSATATLIHKGE 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+LV+ + Q+H +H D +R+ ++ I V+VP+HF E SP +K + NV+
Sbjct: 73 RQLVIPQGIQMHPVTDQPMHVDLRRIKVDQIIKVEVPVHFTGMEASPGLKKGGTL--NVV 130
Query: 128 S-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+ ++ +P+ +E ++ K+EV ++ +S+I LP G + T+ D TIAT
Sbjct: 131 RHSVELNVPAGKIPEALEADISKLEVGDNVKISNITLPEGAEPV-ITDRDFTIAT 184
>gi|430004263|emb|CCF20054.1| 50S ribosomal protein L25 [Rhizobium sp.]
Length = 204
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 104/185 (56%), Gaps = 5/185 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K A ER KG++ R LR+ G +P +IYG + P+ I+++ N + + F ++I
Sbjct: 8 LKAEARERVGKGSA--RELRRNGFIPAVIYGDKQPPISIALSTNEVTKRIHAGGFMTTIA 65
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GK VL +++QL + +H DF RV + + V VP+HFIN + S VK+
Sbjct: 66 TIDVDGKKYQVLPKDYQLDPVRDFTMHVDFLRVSKDTAVTVDVPVHFINDQKS-GVKIGG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V + +C +P I ++L ++ SIH+S + LP+GV + T+ D TIA
Sbjct: 125 -VLNIVRHTVEFNCPADAIPDSITVDLTGFKIGDSIHISHVTLPKGVKPV-ITDRDFTIA 182
Query: 181 TAIIP 185
T + P
Sbjct: 183 TIVAP 187
>gi|395790756|ref|ZP_10470215.1| 50S ribosomal protein L25 [Bartonella alsatica IBS 382]
gi|395409052|gb|EJF75651.1| 50S ribosomal protein L25 [Bartonella alsatica IBS 382]
Length = 208
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 105/197 (53%), Gaps = 4/197 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++ + I++ + F ++ + I +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGFRTTTATITIGKE 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+VL +++QL + LH DF R+ + + V +P+HF+N + +P +K + N++
Sbjct: 72 KIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ IEI+L + SIH+S ++LP+ V+ + + D TIAT P
Sbjct: 130 RHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVTPVIQ-DRDFTIATIAAPA 188
Query: 187 NTLESDNNSSIEKEKNN 203
SD S ++NN
Sbjct: 189 GMDISDETSEQNNDENN 205
>gi|254780418|ref|YP_003064831.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040095|gb|ACT56891.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Liberibacter asiaticus str. psy62]
Length = 191
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ A R K G +R LRK G++P IIYG DP I+++ I L + F ++IL
Sbjct: 7 KLSAVMRDKVGKGSARLLRKNGQIPAIIYGNMSDPKPIALSAKDISKRLYSKNFMTTILT 66
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L+I ++ V+ +++QL +++HADF +V + V VP+ FIN SP +K
Sbjct: 67 LDIGKELVHVIPKDYQLDPVSDILIHADFLQVSEGSTVTVHVPVRFINENKSPGIKQGGK 126
Query: 122 IISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+ NV+ ++ + C N+P I ++L +++ SIH+ DI+LP S + ++ + TIA
Sbjct: 127 L--NVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDIRLPEKTSSM--SQLNITIA 182
Query: 181 TAIIPVN 187
T + P++
Sbjct: 183 TIVAPIS 189
>gi|90418284|ref|ZP_01226196.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1]
gi|90337956|gb|EAS51607.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1]
Length = 219
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+K G +R+LR+ G +P +IYG +DP+ I++ + + AL F + + +E+ G+
Sbjct: 12 REKVGKGAARHLRRNGMIPAVIYGDKQDPLPIAIPYKETFLALHAGGFMTHVATIEVNGQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + ++H DF RV + ++ V +P+HF N E SP +K +I+ V
Sbjct: 72 KISVLPKDYQLEPVRDFLMHVDFLRVSEKTRVTVNIPVHFENEEASPGLK-RGGVINVVR 130
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++ + +P++ ++L +E+ SIH S + LP+ V V
Sbjct: 131 HEVEVHAPASAIPEYFTLDLTGLEIGDSIHASALTLPKNVEV 172
>gi|49475908|ref|YP_033949.1| 50S ribosomal protein L25 [Bartonella henselae str. Houston-1]
gi|71153119|sp|Q6G2L2.1|RL25_BARHE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|49238716|emb|CAF27968.1| 50S ribosomal protein l25 [Bartonella henselae str. Houston-1]
Length = 206
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++++ I++ + F +++ L I +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGDKQPPLAIAVSYKDIFYKIHAGGFRTTVATLAIDKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+VL +++QL + LH DF R+ + + V +P+HF+N + +P +K + N++
Sbjct: 72 KIMVLPKDYQLDPVRDFPLHVDFLRISAKSIVEVNIPVHFLNEDSAPGLKKGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ IEI+L + SIH+S ++LP+ V+ + + D TIAT + P
Sbjct: 130 RHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVNPV-IQDRDFTIATIVAPA 188
Query: 187 NTLESD 192
+ SD
Sbjct: 189 DMDVSD 194
>gi|126731994|ref|ZP_01747797.1| ribosomal protein L25 [Sagittula stellata E-37]
gi|126707526|gb|EBA06589.1| ribosomal protein L25 [Sagittula stellata E-37]
Length = 209
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER G +R R+ G VPGI++GG+K+P+ I++ N++ LK+ F S++ NL++
Sbjct: 10 AQERTGTGKGAARAARRDGMVPGIVFGGDKEPLAINIPFNVLLKRLKQGRFKSTLFNLQV 69
Query: 65 YGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G ++ V+ R+ Q K L H DF R+ K+++ +P+ FIN E +P ++ ++
Sbjct: 70 EGHEDVRVICRDVQRDIVKDLPTHVDFMRLRRTSKVNLFIPVEFINEETAPGIR-KGGVL 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+ V ++ + ++P+ + ++L M++ +H++D+ LP G
Sbjct: 129 TVVRPEVELVVTAGDIPEKVVVDLGNMQIGDIVHINDVTLPEG 171
>gi|284046684|ref|YP_003397024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter
woesei DSM 14684]
gi|283950905|gb|ADB53649.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter
woesei DSM 14684]
Length = 218
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ +G+ +R LR+ G VPGI+YGG+ DP+ ++ + +AL +++ L + G
Sbjct: 13 REIEGSRATRRLRRSGLVPGIVYGGDADPLPFQVDARELRNAL---AHGGAVIQLTLDGA 69
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V+L++ H +LH D RVD ++IH V + IN++ +P +K ++ V
Sbjct: 70 QTPVVLKDHHRHPVNGNMLHVDLLRVDLTQRIHATVVVEVINADDAPGIK-GGGVLEQVT 128
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVN 187
++ I LP +P IE+++ +EV +++LS + P GV+++ EE + + + P
Sbjct: 129 REINIEALPNEIPDTIELDVSSVEVGDTVYLSALTPPSGVALLDDLEET-VLVSVLAPKL 187
Query: 188 TLESDNNSSIEKE 200
++ES++ IE E
Sbjct: 188 SVESEDE--IETE 198
>gi|395788365|ref|ZP_10467929.1| 50S ribosomal protein L25 [Bartonella birtlesii LL-WM9]
gi|395408282|gb|EJF74893.1| 50S ribosomal protein L25 [Bartonella birtlesii LL-WM9]
Length = 208
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 104/197 (52%), Gaps = 4/197 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P +IYG + P+ I++ + I++ + F +++ + I +
Sbjct: 12 RERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGFRTTVATITIGKE 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+VL +++QL + LH DF R+ + + V +P+HF+N + +P +K + N++
Sbjct: 72 KIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ IEI+L + SIH+S ++LP+ V+ + + D TIAT P
Sbjct: 130 RHEIECTAPANAIPEAIEIDLSSYSIGDSIHISAVQLPKDVTPVIQ-DRDFTIATIAAPA 188
Query: 187 NTLESDNNSSIEKEKNN 203
SD E + N
Sbjct: 189 GMDVSDETPEQEDSEEN 205
>gi|88658579|ref|YP_506970.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia
chaffeensis str. Arkansas]
gi|109893362|sp|Q2GHW3.1|RL25_EHRCR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88600036|gb|ABD45505.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ehrlichia
chaffeensis str. Arkansas]
Length = 210
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 14/205 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+KI A RK GT SR LR G++P +IYG +D + IS+++ + + ++
Sbjct: 7 VKINASLRKNVGTGPSRALRLSGEIPAVIYGKGRDSLSISLSNREFVSKYRSAALSTHLI 66
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LEI K E VL+R+ Q H + H DFQ +D +I ++VPL F N + +K
Sbjct: 67 ELEIDNKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGG 126
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N++ L I C PK + + IEI+L + SIH+SD+KLP V+V E +P I
Sbjct: 127 VL--NILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMK-EHNPAI 183
Query: 180 ATAIIPVNTLESDNNSSIEKEKNNN 204
T +++S EKE +N
Sbjct: 184 VTI----------SSASTEKEAESN 198
>gi|149177254|ref|ZP_01855860.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797]
gi|148843968|gb|EDL58325.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797]
Length = 208
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 97/169 (57%), Gaps = 6/169 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
KI A +R+K G+ SR++R+ G++P ++YG +DP +S++ + + +K +
Sbjct: 8 QKISATKREKLGSIESRHIRRAGRIPAVVYGHGQDPAHVSVDEHDLQDLVKN---RERVF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ GKVE +LR+ Q + +LH D R++ +++ ++VP+ + SP +
Sbjct: 65 EIDVDGKVEETMLRDLQWDTFGTQILHVDLIRINASERVTLEVPVRLRGT--SPGAT-DG 121
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
I+ + L + CL ++P +I + + +E+ +IH+SDI++PRG +
Sbjct: 122 GILEQPLHALELDCLAHSIPDYISVKINALEIGDAIHVSDIEVPRGCKI 170
>gi|144898693|emb|CAM75557.1| 50S ribosomal protein L25 [Magnetospirillum gryphiswaldense MSR-1]
Length = 200
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I+A R + G +R R+ GKVPG+IYGG +DP+ I+++ +I+ L K F + + ++
Sbjct: 7 IVAELRDRAGKGAARATRREGKVPGVIYGGKQDPICIAIDPRVIWAELHKPGFKTRLFDV 66
Query: 63 EI-YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G L R+ Q H +H D RV + +HVKVP+H IN++ SP VK
Sbjct: 67 DLAAGGKHRCLCRDVQFHPVSDQPVHIDLMRVSADAVVHVKVPVHVINADKSPGVKAGG- 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
++S + ++ ++C P +P I I+L +V S+H++D+ LP GV+ H
Sbjct: 126 VVSLELHEVEVTCAPDLIPSEIVIDLAGKDVGYSVHVNDLGLPAGVTPYH 175
>gi|402496564|ref|YP_006555824.1| 50S ribosomal protein L25 [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398649837|emb|CCF78007.1| 50S ribosomal protein L25 [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 203
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 18 NLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQ 77
+LR+ G +P +IYG D V ++++ K + + ++ L I GK E L+R+ Q
Sbjct: 24 SLREKGYIPAVIYGKGHDNVNLTLSTKEFTKKYKLGSLSAHVIELNISGKKEYALVRSIQ 83
Query: 78 LHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPK 137
H K + H DFQ VD + ++ + +PL F+N SP +KL +++ + + +
Sbjct: 84 WHMVKDTIQHVDFQFVDKDGEVKIDIPLLFVNESKSPGIKLGG-VLNILCRSITVKSSLD 142
Query: 138 NLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVNTLESDNNSS 196
+P+ IE++L + SIH+SD+KLP GV + EE+ T+ T ++T++SD S
Sbjct: 143 RIPQAIEVDLSDKMIGQSIHISDVKLPEGVKLAAHEEENFTVVT----ISTVDSDVEES 197
>gi|407786492|ref|ZP_11133637.1| 50S ribosomal protein L25/general stress protein Ctc [Celeribacter
baekdonensis B30]
gi|407201213|gb|EKE71214.1| 50S ribosomal protein L25/general stress protein Ctc [Celeribacter
baekdonensis B30]
Length = 206
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 104/192 (54%), Gaps = 4/192 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+IA R G +R R+ G VPGI+YG +K+P+ I++ N++ LK F S++ NL
Sbjct: 8 LIATVRAGTGKGAARQARRDGFVPGIVYGDDKEPMPINLPFNVLLKRLKAGRFLSTLFNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G+ ++ V+ R Q K L H DF R+ +I++ +P+ + E+SP +K
Sbjct: 68 KVEGQDDVRVICRGVQRDVVKDLPTHVDFMRLHRNSRINLFIPVEIVGEEVSPGIK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
++++V +++ + ++P I +++ K + H+SDI+LP+G + + D IA
Sbjct: 127 VVTHVRTEVELIVTAADIPDHITLDISKGTIGDVYHISDIELPKGTKAV--IDRDFVIAN 184
Query: 182 AIIPVNTLESDN 193
P SD+
Sbjct: 185 ITAPAGLGSSDD 196
>gi|395793134|ref|ZP_10472539.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|395431448|gb|EJF97466.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 208
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P IIYG + P+ I++ + I++ + F ++I L I +
Sbjct: 12 RERVGKGSSRELRRNGLIPAIIYGEKQPPLAITVPYKEIFYKIHAGGFRTTIATLVIGKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + LH DF R+ + + V +P+HF+N + +P +K + N++
Sbjct: 72 KITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ IEI+L + SIH+S ++LP GV+ + + D TIAT P
Sbjct: 130 RHEIECTAPANAIPEAIEIDLASYSIGDSIHISAVQLPEGVTPVIQ-DRDFTIATIAAPA 188
Query: 187 NTLESDNNS 195
D S
Sbjct: 189 GLDIGDEAS 197
>gi|115523456|ref|YP_780367.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris BisA53]
gi|122297068|sp|Q07RP7.1|RL25_RHOP5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115517403|gb|ABJ05387.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisA53]
Length = 234
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 93/162 (57%), Gaps = 4/162 (2%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKL 84
VP +IYG NK PV IS+ + + F +++++L++ G V+ R+F L +
Sbjct: 29 VPAVIYGDNKPPVTISLEDRELRLRILAGRFLTTVVDLDLDGTKHRVIPRDFHLDPVRDF 88
Query: 85 VLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS-DLYISCLPKNLPKFI 143
+H DF R+ I V VPLH NSE +P VK + N+++ + + ++P+FI
Sbjct: 89 PVHVDFLRLGEGATIRVSVPLHLKNSETAPGVKRGGTV--NIVTHTVDLEAEADSIPQFI 146
Query: 144 EINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
E ++ +++ TS+HLSD+ LP+GV ++ + ED T+ T + P
Sbjct: 147 EADIGTLDIGTSLHLSDVVLPKGVKLV-AAREDVTLVTIVPP 187
>gi|56552806|ref|YP_163645.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ZM4]
gi|260753467|ref|YP_003226360.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|384412170|ref|YP_005621535.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|397677104|ref|YP_006518642.1| 50S ribosomal protein L25 [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|68053039|sp|Q5NL76.1|RL25_ZYMMO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56544380|gb|AAV90534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ZM4]
gi|258552830|gb|ACV75776.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|335932544|gb|AEH63084.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|395397793|gb|AFN57120.1| 50S ribosomal protein L25 [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 220
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 101/186 (54%), Gaps = 4/186 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ ++A +R + G SR +R+ G VP +IYG + I+++H ++ L F +S++
Sbjct: 5 LNLLAKKRDRAGKGASRAIRREGLVPAVIYGDKTPAMGITVDHIALFKMLNTGHFMNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+++ G+ + ++ Q H VLH DF RV + V +P+ +++ E SP +KL
Sbjct: 65 TIDVDGQKLPTIPKDVQFHPVTDRVLHVDFLRVSANSLVEVAIPVSYVDEEKSPGIKLGG 124
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N+I +L + +P+ I +++ +EV SIHL+ IKLP G + H E + T
Sbjct: 125 VL--NIIHHELKLKVKATAIPEEIVVSVAGLEVGDSIHLNQIKLPEGAELAHD-EHESTA 181
Query: 180 ATAIIP 185
AT I P
Sbjct: 182 ATVIAP 187
>gi|217977796|ref|YP_002361943.1| 50S ribosomal protein L25/general stress protein Ctc [Methylocella
silvestris BL2]
gi|254801056|sp|B8EK41.1|RL25_METSB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|217503172|gb|ACK50581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocella
silvestris BL2]
Length = 227
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A R G +R++R+ G++PG+IYGG I++++ + + F +++ +
Sbjct: 7 LAAAARHGTGKGAARSVRREGRIPGVIYGGGDPAEPITLDYRELNKLIYAGHFLTTLFEI 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ G + V+ R++QL K L LH DF R+ + V+VP+HF+N E P VK +
Sbjct: 67 DVAGTKQRVIPRDYQLDPIKDLPLHVDFLRLKPGASLKVEVPVHFLNQETCPGVKKGGSV 126
Query: 123 ISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N++ + + ++P+ I +L ++E+N S+HL+ + LP+G E D TI T
Sbjct: 127 --NIVRHSIELRVPADDIPEAITADLGELEINDSLHLTALALPQGCRPTQR-ERDFTIVT 183
Query: 182 AIIPVNTLES 191
P+ E+
Sbjct: 184 ITPPLVVAET 193
>gi|423713671|ref|ZP_17687931.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395422142|gb|EJF88358.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
OK-94-513]
Length = 208
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR LR+ G +P IIYG + P+ I++ + I++ + F ++I L I +
Sbjct: 12 RERVGKGSSRELRRNGLIPAIIYGEKQPPLAITVPYKEIFYKIHAGGFRTTIATLVIGKQ 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL +++QL + LH DF R+ + + V +P+HF+N + +P +K + N++
Sbjct: 72 KITVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
P N +P+ IEI+L + SIH+S ++LP GV+ + + D TIAT P
Sbjct: 130 RHEIECTAPANAIPEAIEIDLASYSIGDSIHISAVQLPEGVTPVIQ-DRDFTIATIAAPA 188
Query: 187 N 187
Sbjct: 189 G 189
>gi|254450901|ref|ZP_05064338.1| ribosomal protein L25, Ctc-form [Octadecabacter arcticus 238]
gi|198265307|gb|EDY89577.1| ribosomal protein L25, Ctc-form [Octadecabacter arcticus 238]
Length = 215
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 2 KIIAFE---RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSS 58
K+ FE R G +R R+ G VPG++YGG +DP+ I++ N++ LK F S+
Sbjct: 4 KVPDFEATLRTDTGKGAARQARRDGLVPGVVYGGGEDPISINVPFNVLLKRLKAGRFLST 63
Query: 59 ILNLEIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVK 117
+ NL++ G ++ V+ RN Q H K L H DF R+ KI++ + + FIN E PA+K
Sbjct: 64 LFNLKVEGHDDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKINLFIGVEFINEEDCPALK 123
Query: 118 LNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+I V +++ + ++P+ + ++L +E+ +I +S IKLP G
Sbjct: 124 EGGVLIP-VRNEVELIVTAGDIPEVLTVDLTGLELGDTITISSIKLPAG 171
>gi|197106324|ref|YP_002131701.1| 50S ribosomal protein L25 [Phenylobacterium zucineum HLK1]
gi|226736347|sp|B4R8Q7.1|RL25_PHEZH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|196479744|gb|ACG79272.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Phenylobacterium zucineum HLK1]
Length = 208
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ GT +R+ R+ G VPG++YGG+KDPV I++ N AL ++ L+ +
Sbjct: 11 RERTGTGGARDTRRSGMVPGVLYGGDKDPVAIAVRANEFRKALYTGKLLGHLVTLKYGNE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V+ + +H H D RVD ++I ++VP+HF N + SP +K ++ +
Sbjct: 71 TQPVIAKAVDMHPVTDEPQHFDLYRVDEHQQIKIEVPVHFTNQDDSPGLKRGGT-LNVAL 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLP 164
L +SC ++P+ I +L +E+ +I ++D+KLP
Sbjct: 130 HTLTVSCPADSIPEEIVFDLTGLEIGATIRVADLKLP 166
>gi|85716025|ref|ZP_01047002.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A]
gi|85697223|gb|EAQ35104.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A]
Length = 233
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VP +IYG + P IS+ + + F ++I ++ +
Sbjct: 9 ATARPKSGKGAARAERRAGRVPAVIYGNKQPPQPISVEGAELRQRILAGRFLTTIFDINL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V+ R+F L K +H DF R+ I V VPL + ++++P VK ++
Sbjct: 69 DGKKHRVIPRDFHLDPVKDFPIHVDFMRLGEGAAIRVSVPLRLLKADVAPGVKRGGT-VN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + I C +N+P+FIE ++ +E+N S+HLSD++LP GV + ED T+ T +
Sbjct: 128 LVTHAIDIECAAENIPQFIEADVGALEINHSLHLSDVELPPGVKTL--AREDVTLVTIVP 185
Query: 185 PVNTLE 190
P E
Sbjct: 186 PSGYAE 191
>gi|325293585|ref|YP_004279449.1| 50S ribosomal protein L25 [Agrobacterium sp. H13-3]
gi|325061438|gb|ADY65129.1| 50S ribosomal protein L25/general stress protein CTC [Agrobacterium
sp. H13-3]
Length = 203
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 106/181 (58%), Gaps = 3/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I+++ N + + F +++ +++
Sbjct: 10 AEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGFMTTVAVIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL +++QL + +H DF RV ++V+VP+HF N E S +K+ +++
Sbjct: 70 DGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFENEEKS-EIKIGG-VLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + C ++P+FI ++L +++ S+H+S++KLP+ +S + + + D TIAT +
Sbjct: 128 IVRHTVEFHCPANDIPEFITVDLSGLKIGDSVHISNVKLPKNISPVIA-DRDFTIATIVA 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|381201652|ref|ZP_09908777.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingobium
yanoikuyae XLDN2-5]
gi|427407627|ref|ZP_18897829.1| 50S ribosomal protein L25 [Sphingobium yanoikuyae ATCC 51230]
gi|425714131|gb|EKU77142.1| 50S ribosomal protein L25 [Sphingobium yanoikuyae ATCC 51230]
Length = 203
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G SR LR+ G+VP +IYG N++P+ I + ++ L F +S++
Sbjct: 5 LTLSAEARDRAGKGASRALRREGRVPAVIYGMNEEPLSIHVEEKLLNKQLGTGHFFNSVI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK L ++ H LHADF RV + V VP+ F N + SP +K
Sbjct: 65 MVEVGGKTVRTLAKDVAFHPVTDRPLHADFLRVSEHATVTVAVPVRFENEDASPGLK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V D+ + +P + ++L+ EV SIH+S + LP+G + D TIA
Sbjct: 124 GVLNVVRHDVELVVDAAEIPDDVVVDLKGFEVGDSIHISAVTLPKGAKAA-IEDRDFTIA 182
Query: 181 TAIIP 185
T + P
Sbjct: 183 TIVAP 187
>gi|254439461|ref|ZP_05052955.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307]
gi|198254907|gb|EDY79221.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307]
Length = 215
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 2 KIIAFE---RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSS 58
KI FE R G +R R+ G VPG++YGG +DP+ I++ N++ L+ F S+
Sbjct: 4 KIPDFEATLRTDTGKGAARQARRDGLVPGVVYGGGEDPIAINVPFNVLLKRLQAGRFLST 63
Query: 59 ILNLEIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVK 117
+ NL++ G ++ V+ RN Q H K L H DF R+ KI++ + + FIN + PA+K
Sbjct: 64 LFNLKVEGHDDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKINLFIGVEFINEDECPALK 123
Query: 118 LNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP 177
+I V +++ + ++P+ + ++L +E+ +I +S IKLP G + + D
Sbjct: 124 EGGVLIP-VRNEVELIVTAGDIPEILTVDLTGLELGETITISSIKLPAGAKA--TIDRDF 180
Query: 178 TIATAIIPVNTLESDNNSS 196
IA P +D+
Sbjct: 181 VIANLQAPAALTSADDGED 199
>gi|304391297|ref|ZP_07373241.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130]
gi|303296653|gb|EFL91009.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130]
Length = 227
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 5/199 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A R + G +R LR+ VP +IYG KDP+ I++ A+ F +++L++
Sbjct: 7 LTAQARDRVGKGAARELRRNNMVPAVIYGDKKDPLSIALPRKETTLAIHAGGFMTTLLDI 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E+ GK VL +++QLH +V+H D RV + + V++P+ F+N E +K +
Sbjct: 67 EVDGKKHKVLPKDYQLHPVSDVVMHVDLLRVSAKTAVTVEIPVVFLNEEECIGLKAGGTL 126
Query: 123 ISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
NV+ + ++C ++P EI+L ++ S+++S + +P G T+ D TIAT
Sbjct: 127 --NVVRFTVEVNCPANSIPDNFEIDLTSYDIGDSVNISAVDMPEGAEPT-ITDRDFTIAT 183
Query: 182 AIIPVNTLESDNNSSIEKE 200
P L+SD ++ + E
Sbjct: 184 IATPAG-LKSDEDADGDDE 201
>gi|418297121|ref|ZP_12908963.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens CCNWGS0286]
gi|355538219|gb|EHH07466.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens CCNWGS0286]
Length = 202
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 108/185 (58%), Gaps = 3/185 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I+++ N + + F +++ +++
Sbjct: 10 AEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGFMTTVAIIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL +++QL + +H DF RV ++V+VP+HF+N E S +K+ +++
Sbjct: 70 DGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFVNEEKS-DIKIGG-VLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + C ++P+FI ++L +++ ++H+S++KLP+ ++ + + + D TIAT +
Sbjct: 128 IVRHTVEFHCPANDIPEFITVDLAGLKIGDNVHISNVKLPKNITPVIA-DRDFTIATIVA 186
Query: 185 PVNTL 189
P +
Sbjct: 187 PAGGV 191
>gi|114777713|ref|ZP_01452673.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1]
gi|114551929|gb|EAU54463.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1]
Length = 208
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 3/166 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G S +R LR+ GK+P IIYGG+K + +++++ +I L +E FH+S+L +++ G
Sbjct: 11 RETNGRSATRRLRRTGKIPAIIYGGDKPDLSVAVDYFVISKLLNQEEFHTSMLEVKVKGS 70
Query: 68 V--ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
V+L+ Q K V H DF RV + I + VP+ IN + P V +I
Sbjct: 71 RGKNTVMLKATQWDPIKDTVTHLDFIRVSSSDMITLDVPVVAINEDKCPGVA-KGGLIDV 129
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
+ L ++ ++P IEI+ +++ S+H+ D+ LP G V H
Sbjct: 130 IRHSLEVTSRADSIPAHIEIDCSGLDIGDSVHIEDVTLPEGAVVHH 175
>gi|424864508|ref|ZP_18288411.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86B]
gi|400759254|gb|EJP73436.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86B]
Length = 235
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R++ GT+ +R +R + G VP IIYG KD + I + N + A + E F++ +L ++
Sbjct: 9 ADTRERTGTNKARVIRNVDGMVPAIIYGNEKDSLNIKLKLNELTKASQNELFYTQVLIIK 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
E V+L+ Q K LHADF RV + K+ V +P F+N + VK +I
Sbjct: 69 TEDGDEKVVLKELQRDPAKGKFLHADFLRVSRKTKLKVVIPFTFLNEDDCEGVKTEGGVI 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
S ++ I C ++P+ IE+++ + + +I L+D+ LP G + +EE + ++
Sbjct: 129 SKATREIEILCSAGDIPESIEVDVTSLMIGDAIRLTDLNLPEGSEIPGLSEETDQLVVSV 188
>gi|84515241|ref|ZP_01002603.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53]
gi|84510524|gb|EAQ06979.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53]
Length = 204
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 90/160 (56%), Gaps = 2/160 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G+VPGI+YGG DP I++ N + L+K F S++ NL++ G+
Sbjct: 13 RAGTGKGAARQARRDGEVPGIVYGGGIDPQSINIPFNYLLTTLRKGRFMSTLFNLKVEGQ 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V+ R Q K L +H D R+ ++++ +P+ FIN + P +K +++ V
Sbjct: 73 DDVRVVCRGVQRDVVKDLPIHIDLMRLKRTSRVNLFIPVEFINGDTCPGIK-KGGVLTVV 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+++ + L ++P + ++L ++ IH+SD+ LP G
Sbjct: 132 RNEVEMDVLAGDIPDHLTVDLANAQMGDVIHISDVTLPEG 171
>gi|402575225|ref|YP_006608117.1| 50S ribosomal protein L25 [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|407453234|ref|YP_006732553.1| 50S ribosomal protein L25 [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407681597|ref|YP_006796773.1| 50S ribosomal protein L25 [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407681875|ref|YP_006797050.1| LSU ribosomal protein L25p [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|401872029|gb|AFQ24197.1| LSU ribosomal protein L25P [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|405779951|gb|AFS18954.1| 50S ribosomal protein L25 [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407243208|gb|AFT80609.1| LSU ribosomal protein L25p [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407243486|gb|AFT80886.1| LSU ribosomal protein L25p [Candidatus Portiera aleyrodidarum
BT-B-HRs]
Length = 184
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+I AF R G ++NLR +P IIYG K V I + +I + +K+ETF S+IL
Sbjct: 1 MQINAFVRYNIGKKANKNLRNNDIIPAIIYGDKKQNVLIGLEKKIILNFIKQETFSSTIL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++++ K E V+LR+ Q H YK L+ H D R++ K+I V V + I E+ VK +
Sbjct: 61 YIKLFNKKEKVILRDIQRHPYKNLINHIDLLRINENKQITVLVKIKLIGKELCKGVKQDG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ S + I CLPK LPK EIN+ + V S+ + I T + T+
Sbjct: 121 GLLVLHKSYVRIKCLPKFLPKAFEINVSNLSVGQSVDIKQFYKTNNFFFIEKTNKIVTV 179
>gi|357976241|ref|ZP_09140212.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. KC8]
Length = 205
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R++ G SR +R+ G+VP +IYG ++P+ I + + AL F ++++
Sbjct: 5 LNLSAETRERAGKGASRAVRREGRVPAVIYGNKQEPLSIHVEEKALVKALSTGHFMNTVI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E G+ L ++ Q H H DF R+ +HV VP+ F + +P +K
Sbjct: 65 MIEANGQQIRTLPKDVQFHPVTDRPQHVDFLRIGEHTTVHVNVPVVFTDEADAPGIK-RG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V D+ + +P ++I+L+ +EV SIH+S++ LPRG S T+ D TIA
Sbjct: 124 GVLNIVQHDIELVVDAALIPDEVKISLKGLEVGESIHISNVTLPRG-SKAAITDRDFTIA 182
Query: 181 TAIIP--VNTLESDNNSS 196
T + P + + E DN ++
Sbjct: 183 TIVAPSALKSQEGDNETA 200
>gi|384921612|ref|ZP_10021587.1| 50S ribosomal protein L25/general stress protein Ctc [Citreicella
sp. 357]
gi|384464518|gb|EIE49088.1| 50S ribosomal protein L25/general stress protein Ctc [Citreicella
sp. 357]
Length = 205
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 6 FERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIY 65
ER G +R R+ G VPGI++GG DP+ I M N++ LK F S++ NL++
Sbjct: 11 LERSGTGKGAARQARRDGMVPGILFGGEGDPLAIQMPFNVLLKRLKAGRFKSTLFNLKME 70
Query: 66 GKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK ++ V+ R+ Q K L H D R+ +I + + + FIN + +P +K +++
Sbjct: 71 GKDDVRVICRDVQRDVVKDLPTHFDLMRLRRTSRIALYIHVDFINEDKAPGIK-KGGVLT 129
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
V ++ ++ L ++P I ++LE ++ IH+SD+ LP G
Sbjct: 130 IVRQEVELNVLAGDIPDHITVDLEGKDIGDVIHISDVVLPEGA 172
>gi|384084006|ref|ZP_09995181.1| 50S ribosomal protein L25 [Acidithiobacillus thiooxidans ATCC
19377]
Length = 202
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R++ G SR LR+ G VP ++YG NK + +S+ ++ L E ++ ++ L
Sbjct: 6 IAAMPREENGRRASRRLRRTGMVPAVLYGDNKAAMGLSIEARLLRKLLADERAYTHVITL 65
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E E L+R+ Q+H YK+ VLH DF RV + + + VP+HF++ +K +
Sbjct: 66 EFPKGKETALIRDLQMHPYKEEVLHMDFMRVHAGETVRLHVPIHFLHENTCVGIKAGG-V 124
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ ++D+ + LP+ IE+++ +E S+HLS I LP GV +I ED
Sbjct: 125 LHRALTDVEVEAPVDRLPEAIEVDIANLEKGESLHLSQISLPAGVILIPLQHED 178
>gi|393722732|ref|ZP_10342659.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. PAMC 26605]
Length = 225
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R++ G SR LR+ G+VP +IYG ++P+ I + + L F +S++
Sbjct: 5 LELAAETREQVGKGASRLLRREGRVPAVIYGNKQEPLSIHVEEKALMRLLMTGHFMNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ G+ L ++ A H DF R+ + V+VP+ F + + +P +
Sbjct: 65 MIDAGGQQVRTLPKDVSFDAVTDRPTHVDFLRISAHSTVTVQVPIAFTDEDDAPGIAKAG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ +L + C N+P I I+L +EV SIH+SD+KLP GV+ T+ D IA
Sbjct: 125 GVLNVTRHELELVCDAANIPSEITISLAGLEVGASIHISDVKLPNGVTPA-ITDRDFAIA 183
Query: 181 TAIIPVNTLESD 192
T + P +D
Sbjct: 184 TIVPPTVPTAAD 195
>gi|418407211|ref|ZP_12980529.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens 5A]
gi|358006355|gb|EHJ98679.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens 5A]
Length = 203
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 106/181 (58%), Gaps = 3/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I+++ N + + F +++ +++
Sbjct: 10 AEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGFMTTVAVIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL +++QL + +H DF RV ++V+VP+HF N E S +K+ +++
Sbjct: 70 DGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFENEEKS-EIKIGG-VLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + C ++P+FI ++L +++ S+H+S++KLP+ ++ + + + D TIAT +
Sbjct: 128 IVRHTVEFHCPANDIPEFITVDLSGLKIGDSVHISNVKLPKNITPVIA-DRDFTIATIVA 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|92118571|ref|YP_578300.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrobacter
hamburgensis X14]
gi|122417117|sp|Q1QIV7.1|RL25_NITHX RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91801465|gb|ABE63840.1| LSU ribosomal protein L25P [Nitrobacter hamburgensis X14]
Length = 233
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K G +R R+ G+VPG+IYG N+ P IS+ + + F +++ ++ +
Sbjct: 9 ATARPKSGKGAARAERRAGRVPGVIYGNNQPPQPISVEEPELRQRILAGRFLTTVFDISL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V+ R+F L K +H DF R+ I V +P+ + ++++P VK ++
Sbjct: 69 EGKKHRVIPRDFHLDPVKDFPIHVDFLRLGEGATIRVSIPIRLLKADVAPGVKRGGT-VN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
VI + + C ++P+FIE ++ +E++ S+HLSD++LP GV + ED T+ T +
Sbjct: 128 LVIHAIDVECAADDIPQFIEADVGGLEMSHSLHLSDVELPPGVKPL--AREDMTLVTIVP 185
Query: 185 PVNTLE 190
P E
Sbjct: 186 PSGYAE 191
>gi|383640040|ref|ZP_09952446.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
elodea ATCC 31461]
Length = 199
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G SR LR+ G+VP +IYG +DP I +N + L F +S++
Sbjct: 5 LTLSAETRDRAGKGASRALRREGRVPAVIYGNKQDPASIHVNERELQKLLNTGHFFNSVI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ E L ++ LH DF R+ +HV+VP+ F++ E++P +K
Sbjct: 65 MV----NGERTLAKDVAFDVVTDRPLHVDFLRISEHATVHVEVPIVFVDEELAPGLK-RG 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V +L + +P+ IEI+L+ +EV S+H+S + LP+G + T+ D TIA
Sbjct: 120 GVLNIVRHELELVVDAAEIPEQIEISLKGLEVGDSLHISAVTLPKGATPA-ITDRDFTIA 178
Query: 181 TAIIPVNTLESDNNSSIEKE 200
T + P SD ++ E
Sbjct: 179 TVVAPSALKSSDGEAADAAE 198
>gi|312144320|ref|YP_003995766.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
hydrogeniformans]
gi|311904971|gb|ADQ15412.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
hydrogeniformans]
Length = 226
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 100/181 (55%), Gaps = 12/181 (6%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIY-- 65
R + G +R +R+ GK+PG++YG KDP I ++ + I L F ++I++L +
Sbjct: 11 RTESGKGVARKIRRDGKIPGVVYGRGKDPKSIKLDPSDIEKLL----FSNAIIDLTVADD 66
Query: 66 -GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ V++++FQ K+ +LH DFQ + ++KI V VPLH E + A + ++
Sbjct: 67 DGEESTVIIKDFQKSVIKRELLHVDFQYISMDEKITVSVPLHL---EGTAAGVHDGGVLQ 123
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
++ ++ I LP +P I I++ +E+ S+ +D+ LP G+ ++ + E I T +
Sbjct: 124 QLLRNVDIDALPAEIPSEITIDISDLEMGDSLSAADLDLPEGIDLVTDSSE--VIVTVVT 181
Query: 185 P 185
P
Sbjct: 182 P 182
>gi|398384279|ref|ZP_10542312.1| ribosomal protein L25, Ctc-form [Sphingobium sp. AP49]
gi|397722875|gb|EJK83404.1| ribosomal protein L25, Ctc-form [Sphingobium sp. AP49]
Length = 203
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G SR LR+ G+VP +IYG N++P+ I + ++ L F +S++
Sbjct: 5 LTLSAEARDRAGKGASRALRREGRVPAVIYGMNEEPLSIHVEEKLLNKQLGTGHFFNSVI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+E+ GK L ++ H LHADF RV + V VP+ F N + SP +K
Sbjct: 65 MVEVGGKTVRTLAKDVAFHPVTDRPLHADFLRVSEHATVTVAVPVRFENEDASPGLK-KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V D+ + +P + ++L+ +V SIH+S + LP+G + D TIA
Sbjct: 124 GVLNIVRHDVELVVDAAEIPDDVVVDLKGFDVGDSIHISAVTLPKGAKAA-IEDRDFTIA 182
Query: 181 TAIIP 185
T + P
Sbjct: 183 TIVAP 187
>gi|386351842|ref|YP_006050090.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum rubrum F11]
gi|346720278|gb|AEO50293.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum rubrum F11]
Length = 179
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 90/159 (56%), Gaps = 3/159 (1%)
Query: 28 IIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI-YGKVELVLLRNFQLHAYKKLVL 86
+IYGG +DPV +S+ +I+ ++K F S + +L + G+ V++++ Q H + +
Sbjct: 1 MIYGGRQDPVLLSLAPRLIHTEMRKAGFSSRLFDLTVEGGETHRVMVQDVQFHPVTDMPI 60
Query: 87 HADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEIN 146
H DF R+ + ++ V +P+HFIN SP +K +++ V ++ + P LP F E++
Sbjct: 61 HVDFLRIGKDTEVTVAIPVHFINETASPGLK-RGGVLNVVRHEIEVHGRPDALPDFFEVD 119
Query: 147 LEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
L EV SIH+ +K+P GV + + E D TI T P
Sbjct: 120 LTGAEVGDSIHVGVVKIPEGVRPVIA-ERDFTICTIAAP 157
>gi|433614179|ref|YP_007190977.1| ribosomal protein L25, Ctc-form [Sinorhizobium meliloti GR4]
gi|429552369|gb|AGA07378.1| ribosomal protein L25, Ctc-form [Sinorhizobium meliloti GR4]
Length = 204
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 102/178 (57%), Gaps = 4/178 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G SR LR+ G +P +IYG + P+ I+++ + + F +++ +++
Sbjct: 9 AETRDRVGKGSSRELRRNGLIPAVIYGDKQPPLSIALSTKDVTMKIHAGGFMTTVATIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VL +++QL + +H DF RV ++ V+VP+HF N E SP +K +
Sbjct: 69 NGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGAL-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N++ ++ ++ N+P+ + ++L +++ ++H+SD+KLP G + + + + D T+AT
Sbjct: 127 NIVRHEVELNVSADNIPESLTVDLTGLKIGDTVHISDVKLPAGATPVIA-DRDFTVAT 183
>gi|307718726|ref|YP_003874258.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192]
gi|306532451|gb|ADN01985.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192]
Length = 209
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ A R + + ++ LR+ GK+PG++YGG KD V ++++ + + I++
Sbjct: 5 KLTAIVRTAQKKTEAKALRREGKIPGVVYGG-KDQVPVALDAREFHRTFHGTVAENVIVD 63
Query: 62 LEIYGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + GK VL++++Q + +H DF ++ EKK+ VP+H E +P
Sbjct: 64 LSLEGKETRQVLIKDYQYDPIRGQYIHLDFMEINPEKKLKTHVPIHL---EGTPEGVKKG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
++ + +L ++CLPK+LP+ I +++ +EV S+H+ DI+ P GV +++ ++
Sbjct: 121 GLLEFFVQELEVTCLPKDLPEVIVLDISSLEVGDSLHVQDIQAPDGVEILNPPDQ 175
>gi|150397463|ref|YP_001327930.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
medicae WSM419]
gi|166223724|sp|A6UBR5.1|RL25_SINMW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|150028978|gb|ABR61095.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium
medicae WSM419]
Length = 207
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 103/178 (57%), Gaps = 4/178 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I+++ + + F +++ +++
Sbjct: 9 AETRERVGKGSSRELRRNGLIPAVIYGDKQPPLSIALSTKDVTMKIHAGGFMTTVATIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL +++QL + +H DF RV ++ V+VP+ F N E SP +K +
Sbjct: 69 DGKKIRVLPKDYQLDPVRDFTMHVDFLRVKKGSQVSVQVPVRFENEEKSPGLKQGGAL-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N++ ++ ++ N+P+F+ ++L +++ ++H+S+++LP G + + T+ D T+AT
Sbjct: 127 NIVRHEVELNVSADNIPEFLTVDLTGLKIGDTVHISNVELPAGATPV-ITDRDFTVAT 183
>gi|302338328|ref|YP_003803534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta
smaragdinae DSM 11293]
gi|301635513|gb|ADK80940.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Spirochaeta
smaragdinae DSM 11293]
Length = 209
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 5/172 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ F R + +R LR+ GK+P IIYG + +PV IS+ N + + S+I+ +
Sbjct: 6 LTGFARTELKKGAARRLRREGKIPAIIYG-HSEPVPISVPANE-FEKKYSDLSESTIITI 63
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+ GK VL++++Q + + V H DF ++ KK+ VPLH + + + VK I
Sbjct: 64 SVGGKEYDVLIKDYQENTMRGEVTHLDFFEIERGKKLKTHVPLHAVGT--AQGVK-EGGI 120
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
+ ++ I CLPK++P +EIN+E M + S H+SD+ +P GV+V+ ST+
Sbjct: 121 LELGFHEIEIECLPKDIPSHLEINIEGMAIGDSRHISDMSVPEGVTVLVSTD 172
>gi|258541469|ref|YP_003186902.1| 50S ribosomal protein L25/general stress protein Ctc [Acetobacter
pasteurianus IFO 3283-01]
gi|384041390|ref|YP_005480134.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-12]
gi|384049905|ref|YP_005476968.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-03]
gi|384053015|ref|YP_005486109.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-07]
gi|384056247|ref|YP_005488914.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-22]
gi|384058888|ref|YP_005498016.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-26]
gi|384062182|ref|YP_005482824.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-32]
gi|384118258|ref|YP_005500882.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421850152|ref|ZP_16283119.1| LSU ribosomal protein L25P [Acetobacter pasteurianus NBRC 101655]
gi|421853284|ref|ZP_16285961.1| LSU ribosomal protein L25P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|256632547|dbj|BAH98522.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-01]
gi|256635604|dbj|BAI01573.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-03]
gi|256638659|dbj|BAI04621.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-07]
gi|256641713|dbj|BAI07668.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-22]
gi|256644768|dbj|BAI10716.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-26]
gi|256647823|dbj|BAI13764.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-32]
gi|256650876|dbj|BAI16810.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653867|dbj|BAI19794.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-12]
gi|371459053|dbj|GAB28322.1| LSU ribosomal protein L25P [Acetobacter pasteurianus NBRC 101655]
gi|371478502|dbj|GAB31164.1| LSU ribosomal protein L25P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 204
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLH 79
R+ G VPG+IYGG ++P I+++ +I ++ + S + +++ GK E L+R+ QLH
Sbjct: 24 RRAGLVPGVIYGGKQEPTLIAIDPRIIVKGIQTSGWRSRVYEIKVDGKAERALVRDVQLH 83
Query: 80 AYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS-DLYISCLPKN 138
K +H DF R+ ++HV+V +HF N E P +K + NV+ + + N
Sbjct: 84 PVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGVL--NVVRHTIEVDVPADN 141
Query: 139 LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+P+F ++L K+++ ++ D++ GV+ + + EE+ +A+ P
Sbjct: 142 IPEFFTVDLSKLDIADNVRWEDVQGTEGVTPL-THEENFVVASIAAP 187
>gi|118591923|ref|ZP_01549318.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia
aggregata IAM 12614]
gi|118435566|gb|EAV42212.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia
aggregata IAM 12614]
Length = 207
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R LR+ G +P +IYG K + I++ L K F + I +++
Sbjct: 9 ASARNRVGKGAARALRREGLLPAVIYGDKKPALPITIPVKETTITLHKGGFLTHIGMIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ V+ ++FQLH + V+H DF RV + V+VP+HF+N E P +K +++
Sbjct: 69 DGEKHQVIAKDFQLHPVRDDVMHVDFLRVSKGSTLTVEVPVHFLNEETCPGIK-KGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + ++ N+P+ +EI+L K + S+H+S +KLP G T+ D TIAT
Sbjct: 128 IVRHTVEMNVPADNIPEALEIDLAKAQPGDSLHISAVKLPEGCQPT-ITDRDFTIATIAA 186
Query: 185 PVNTLES 191
P E+
Sbjct: 187 PAGMKET 193
>gi|158425771|ref|YP_001527063.1| 50S ribosomal protein L25 [Azorhizobium caulinodans ORS 571]
gi|172047829|sp|A8HS67.1|RL25_AZOC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|158332660|dbj|BAF90145.1| ribosomal protein L25 [Azorhizobium caulinodans ORS 571]
Length = 207
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 5/182 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R R+ G+VP +IYG ++PV IS+ H I + F +++ +++
Sbjct: 9 AVARARGGKGAARAERRAGRVPAVIYGEKQEPVTISLGHKEITRIIYAGHFLTTLFEIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V+ R++QL K L LH DF RV + V+VP+HF N + +P +K +
Sbjct: 69 DGVKHRVIPRDYQLDPVKDLPLHVDFLRVSQGASVTVEVPVHFENQDKAPGLKSGGTL-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
NV++ + + C + +P + +L +E+ S+HLS +KLP GVS + D T+AT +
Sbjct: 127 NVVAHAVALECPAEAIPDHVVADLTGLEIGDSLHLSKVKLPAGVS--SAVTGDDTLATIV 184
Query: 184 IP 185
P
Sbjct: 185 AP 186
>gi|159043502|ref|YP_001532296.1| 50S ribosomal protein L25/general stress protein Ctc
[Dinoroseobacter shibae DFL 12]
gi|189042354|sp|A8LRY8.1|RL25_DINSH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157911262|gb|ABV92695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Dinoroseobacter shibae DFL 12]
Length = 211
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A R G +R R+ G VPG++YGG DP I + N + LK F +++ NL
Sbjct: 8 LVAEPRAGTGKGAARQARRDGYVPGVVYGGGADPQPIQIKFNELLRRLKAGRFMATLFNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G+ ++ V+ RN Q K L H D R+ K+++ +P+ FIN +P +K
Sbjct: 68 KVEGQEDVRVICRNVQRDVVKDLPTHLDLMRLRRTSKVNLFIPVEFINEGAAPGIK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+++ V ++ + ++P+ I ++L +++ ++ +S + LP G + + + D IA
Sbjct: 127 VLTAVRPEVELRVTAGDIPESITVDLTGLDIGDTVTISSVTLPEGAT--PTIDRDFVIAN 184
Query: 182 AIIPVNTLESDN 193
P +DN
Sbjct: 185 IQAPSGLRSADN 196
>gi|389876166|ref|YP_006369731.1| 50S ribosomal protein L25/general stress protein Ctc [Tistrella
mobilis KA081020-065]
gi|388526950|gb|AFK52147.1| 50S ribosomal protein L25/general stress protein Ctc [Tistrella
mobilis KA081020-065]
Length = 204
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 7/199 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNH---NMIYHALKKETFHSSILN 61
A R + G +R R+ G VPG+IYGG + +S N + ++ + S+++
Sbjct: 9 ATARDRGGKGAARQARRDGLVPGVIYGGKQPAQMVSFNAREFGLFFN--RTPDLASTVIE 66
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+++ G+ VL R+ QLH + LH D R+ + +I V+V +HF+N P +K
Sbjct: 67 VKLDGESIRVLARDVQLHPVTDVPLHVDLLRLTGDHEIRVEVAVHFVNEATCPGIK-KGG 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+++ V ++ + C P +P+ I ++L ++ SIH+S ++LP+G S + D TIAT
Sbjct: 126 VLNVVRHEVEMICAPDAIPQSITVDLANAQIGDSIHISAVELPKGTRPAIS-DRDFTIAT 184
Query: 182 AIIPVNTLESDNNSSIEKE 200
P E + ++E
Sbjct: 185 IAAPAGLSEDAGEAEGDEE 203
>gi|329115062|ref|ZP_08243817.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001]
gi|326695505|gb|EGE47191.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001]
Length = 204
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLH 79
R+ G VPG+IYGG ++P I+++ +I ++ + S + +++ GK E L+R+ QLH
Sbjct: 24 RRAGLVPGVIYGGKQEPTLIAIDPRIIIKGIQASGWRSRVYEIKVDGKAERALVRDVQLH 83
Query: 80 AYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS-DLYISCLPKN 138
K +H DF R+ ++HV+V +HF N E P +K + NV+ + + N
Sbjct: 84 PVKDSPVHVDFLRLAAGSRVHVEVSVHFENEETCPGIKRGGVL--NVVRHTIEVDVPADN 141
Query: 139 LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+P+F ++L K+++ ++ D++ GV+ + + EE+ +A+ P
Sbjct: 142 IPEFFTVDLSKLDIADNVRWEDVQGTAGVTPL-THEENFVVASIAAP 187
>gi|89056087|ref|YP_511538.1| 50S ribosomal protein L25 [Jannaschia sp. CCS1]
gi|109893367|sp|Q28L99.1|RL25_JANSC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88865636|gb|ABD56513.1| LSU ribosomal protein L25P [Jannaschia sp. CCS1]
Length = 216
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+IA R G +R R+ G VPGI+YGG DP+ I++ N++ LK F S++ N+
Sbjct: 8 LIAEARTGTGKGAARQARREGNVPGIVYGGGIDPLAINIPFNVLLKRLKDGRFLSTLFNM 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G+ ++ V+ RN Q K L H DF R+ KI + +P+ I E P +K
Sbjct: 68 KVEGQDDVRVICRNVQRDVVKDLPTHVDFMRLKRTSKIALFIPVEVIGEEECPGLK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+++ V ++ + ++P+ I I+L +E+ ++ +S ++LP G
Sbjct: 127 VLTMVRPEVELRVTAGDIPEQITIDLTGLEIGDTVTISSVELPAG 171
>gi|83943888|ref|ZP_00956345.1| ribosomal protein L25 [Sulfitobacter sp. EE-36]
gi|83953528|ref|ZP_00962250.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1]
gi|83842496|gb|EAP81664.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1]
gi|83845135|gb|EAP83015.1| ribosomal protein L25 [Sulfitobacter sp. EE-36]
Length = 215
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
AFER G +R R+ G VPGI++GG+ DP+ I+++ N + L+ F +++ NL++
Sbjct: 10 AFERTGTGKGAARQARRDGMVPGIVFGGDLDPLPINLDFNKLLTKLRAGRFKATLFNLKV 69
Query: 65 YGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G+ ++ V+ R+ Q H K L H D R+ KI++ + + E+SP +K ++
Sbjct: 70 EGQEDVRVICRDVQRHVVKDLPTHVDLMRLKRTTKINLFIQVEVEGEEVSPGLK-KGGVL 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+ V ++ + ++P I I++ ++E+ S+ +S +KLP G
Sbjct: 129 TLVRPEVELVVTAGDIPDHITIDVSELEIGDSLTISSVKLPNG 171
>gi|75676696|ref|YP_319117.1| 50S ribosomal protein L25 [Nitrobacter winogradskyi Nb-255]
gi|109893373|sp|Q3SPM6.1|RL25_NITWN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|74421566|gb|ABA05765.1| LSU ribosomal protein L25P [Nitrobacter winogradskyi Nb-255]
Length = 228
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M++ A R K G +R R+ G+VP +IYG + P IS+ + + F ++I
Sbjct: 5 MELKATARPKSGKGAARAERRAGRVPAVIYGNKQPPQPISVEEPELRQRILAGRFLTTIF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + GK V+ R+F L K +H DF R+ I V VPL + ++++P VK
Sbjct: 65 DINLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPLRLLKADVAPGVKRGG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++ V + + C +++P+FIE ++ +E++ S+HLSD++LP GV + ED T+
Sbjct: 125 T-VNLVTHAIDVECAAESIPQFIEADVGALEISHSLHLSDLQLPPGVKPL--AREDVTLV 181
Query: 181 TAIIPVNTLE 190
T + P E
Sbjct: 182 TIVPPSGYAE 191
>gi|328542809|ref|YP_004302918.1| 50S ribosomal protein L25 [Polymorphum gilvum SL003B-26A1]
gi|326412555|gb|ADZ69618.1| 50S ribosomal protein L25 [Polymorphum gilvum SL003B-26A1]
Length = 200
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G +R LR+ G +P +IYG K + I++ L K F + I +++
Sbjct: 9 ASARNRVGKGAARALRREGLLPAVIYGDKKPALPITVPIKESTLNLHKGGFLTHIGVIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ V+ +++QLH + ++H DF RV + V +P+HF+N E P +K +
Sbjct: 69 DGEKHQVIAKDYQLHPVRDELMHIDFLRVSANTTLTVDIPVHFLNQETCPGIKRGGVL-- 126
Query: 125 NVISDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N++ +P N +P+FIE++L K ++ S+H+S + LP+G T+ D TIAT
Sbjct: 127 NIVRHAVEMTVPANAIPEFIELDLAKADLGDSLHISAVALPKGCQPT-ITDRDFTIATIA 185
Query: 184 IPVNTLESDNNSS 196
P E S
Sbjct: 186 APAGLKEVTEEES 198
>gi|73666725|ref|YP_302741.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia
canis str. Jake]
gi|109893361|sp|Q3YT12.1|RL25_EHRCJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|72393866|gb|AAZ68143.1| LSU ribosomal protein L25P [Ehrlichia canis str. Jake]
Length = 209
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 6/199 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+KI A R+ GT +R +R+ G +P ++YG N+D + + ++ + + ++
Sbjct: 7 VKINASLRENVGTGPARAVRRNGGIPAVVYGKNRDSLSVFLSDREFLSKHRSAALSTHLI 66
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LEI K E VL+R+ Q H + H DFQ +D +I ++VPL F N + VK
Sbjct: 67 ELEIGDKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGVKRGG 126
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ N++ L I CLP + + IEI+L + SIH+SD+ LP ++V+ E +P I
Sbjct: 127 VL--NILHRTLSIKCLPNAILQNIEIDLSDLTAGHSIHVSDLNLPPEINVVMK-EHNPAI 183
Query: 180 ATAIIPVNTLESDNNSSIE 198
T I ++E + S E
Sbjct: 184 VT--ISSTSMEKEGEGSQE 200
>gi|386346807|ref|YP_006045056.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6578]
gi|339411774|gb|AEJ61339.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6578]
Length = 209
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ A R + + ++ LR+ GK+P +IYGG KD V ++++ + + I++
Sbjct: 5 KLTAIVRTAQKKTEAKALRREGKIPAVIYGG-KDQVPVALDAREFHRTFHGTVAENVIVD 63
Query: 62 LEIYGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L + GK VL++++Q + +H DF ++ EKK+ VP+H E +P
Sbjct: 64 LSLEGKETRQVLIKDYQYDPIRGQYIHLDFMEINPEKKLKTHVPIHL---EGTPEGVKKG 120
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
++ + +L ++CLPK+LP+ I +++ +EV S+H+ DI+ P GV +++ D T+
Sbjct: 121 GLLEFFVQELEVTCLPKDLPEAIVLDISSLEVGDSLHVQDIQAPDGVEILNPP--DQTVV 178
Query: 181 TAIIPVNTLESDNNSSIEKEKN 202
V+ + + ++E+E
Sbjct: 179 AVGHAVSEVVVETPEAVEEEGG 200
>gi|302036153|ref|YP_003796475.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii]
gi|300604217|emb|CBK40549.1| 50S ribosomal protein L25 [Candidatus Nitrospira defluvii]
Length = 255
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 7/171 (4%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G +R LR+ G+VP ++YG + + +S+ + + L+ + +++++L I G
Sbjct: 10 REGGGKGPARQLRRAGRVPAVLYG-QGECLLLSVKPDELVKILRSQAGSTALISLTINGA 68
Query: 68 V----ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
LLR+FQ+ VLHADF V +K I VKVP+H + P ++
Sbjct: 69 KSKAKRTALLRDFQVDPIAGSVLHADFFEVAMDKPIRVKVPVHLTGGQ--PIGLKEGGVL 126
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
+V+ L+I CLP LP FIE++ ++++N IHL DI G+ + E
Sbjct: 127 HHVLRQLHIECLPSVLPDFIEVDASQLQINQGIHLKDIPKTEGLRFLDDLE 177
>gi|408787875|ref|ZP_11199601.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
lupini HPC(L)]
gi|424910946|ref|ZP_18334323.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392846977|gb|EJA99499.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|408486339|gb|EKJ94667.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
lupini HPC(L)]
Length = 202
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I+++ N + + F +++ +++
Sbjct: 10 AEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGFMTTVATIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL +++QL + +H DF RV ++V++P+HF N E S +K+ +++
Sbjct: 70 DGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEIPVHFENEEKS-DIKIGG-VLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + C ++P+ I ++L +++ S+H+S++KLP+ ++ + + + D TIAT +
Sbjct: 128 IVRHTVEFHCPANDIPEAITVDLSGLKIGDSVHISNVKLPKNITPVIA-DRDFTIATIVA 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|254293130|ref|YP_003059153.1| 50S ribosomal protein L25/general stress protein Ctc [Hirschia
baltica ATCC 49814]
gi|254041661|gb|ACT58456.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hirschia
baltica ATCC 49814]
Length = 209
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 100/177 (56%), Gaps = 4/177 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G SR R+ +VP I+YGG + PV IS++ I AL F S+++ +E GK
Sbjct: 12 RERTGKGGSRQARRENRVPAILYGGKEAPVSISLDRIEILKALNTGKFLSNLVEIEHKGK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V+ ++ Q H ++ LH D RV ++ + V+VP+HF ++SP +K + N++
Sbjct: 72 KQFVIPQDVQFHPVTEVALHVDLYRVKEDQLVKVEVPVHFTGEDVSPGIKRGGSL--NIV 129
Query: 128 SDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+P +P+F+ ++ +++ ++ +S+I+LP+ + T+ D TIAT +
Sbjct: 130 RHTVELEVPAGHIPEFLTGDVSSLDIGDNVKISNIELPKDATPT-ITDRDFTIATIV 185
>gi|240850146|ref|YP_002971539.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup]
gi|240267269|gb|ACS50857.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup]
Length = 209
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R++ G SR LR+ G +P +IYG + P+ I++ + I++ + F ++I + +
Sbjct: 9 AEKRERVGKGSSRELRRNGLIPAVIYGEKQPPLAITVPYKEIFYKIHAGGFRTTIATIIL 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
+ +VL +++QL + LH DF R+ + + V +P+HF+N + +P +K +++
Sbjct: 69 DKQKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLK-KGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V ++ + +P+ IEI+L + SIH+S ++LP+ V+ I + D TIAT
Sbjct: 128 IVRHEIECTAPASAIPEAIEIDLASYSIGDSIHISAVQLPKDVTPIIQ-DRDFTIATIAA 186
Query: 185 PVN 187
P
Sbjct: 187 PAG 189
>gi|406707811|ref|YP_006758163.1| 50S ribosomal protein L25 [alpha proteobacterium HIMB59]
gi|406653587|gb|AFS48986.1| LSU ribosomal protein L25P [alpha proteobacterium HIMB59]
Length = 213
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 4/161 (2%)
Query: 7 ERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
ERKK T+ K G +P IIYGG+ DP+ ++++ + ++ F+S I +++
Sbjct: 11 ERKKGNTN---PYLKDGLIPSIIYGGSADPLMVAVDRIQLKKRFEEGGFYSKIFEVDLGE 67
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
K E V++++ Q H K +H DFQRVD + +I + VP+ F++ E SP +K +++ V
Sbjct: 68 KKEPVVVKSIQRHKVKNHPIHVDFQRVDDKTRIVISVPIEFVDQETSPGLK-QGGVLNVV 126
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
++ +SCL N+P+ I+LE E+ I LS + L G+
Sbjct: 127 RREIELSCLANNIPEKFVISLEGREIGDDIRLSSVTLGEGM 167
>gi|315498173|ref|YP_004086977.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Asticcacaulis
excentricus CB 48]
gi|315416185|gb|ADU12826.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Asticcacaulis
excentricus CB 48]
Length = 195
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ GT +R R GKVPGI+YGG+K PV I++ N AL ++ L+ +
Sbjct: 11 RERTGTGGARATRNEGKVPGILYGGDKAPVAIAVKLNEFRKALYTGKLAGHLVTLKYGEE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V+ + H + +H D RVD + I + VP+HF N E SP +K ++
Sbjct: 71 TQKVIAKAIDFHPVTDVPVHFDLYRVDETQTIKINVPVHFKNHEASPGIKKGGA-LTVAF 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+L I ++P+ + ++L +++ S+H+ D+ LP V+ +
Sbjct: 130 HELEIQVPAGHIPEDVVVDLSGLDIGASVHVGDLSLPSDVTAV 172
>gi|422297072|ref|ZP_16384716.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
avellanae BPIC 631]
gi|407991614|gb|EKG33432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
avellanae BPIC 631]
Length = 159
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 78/121 (64%), Gaps = 3/121 (2%)
Query: 50 LKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFIN 109
L+ E +S I+ L + G + V+++ Q H K VLHADF RV +K+ VP+HFI
Sbjct: 10 LENEASYSHIIELNVGGTKQNVIIKALQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFIG 69
Query: 110 SEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
E +P K +S+V S+L +SCLPK+LP+FIE+++ +E+ + +HLSD+K P+GV
Sbjct: 70 EE-APVKKGGE--VSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLSDVKAPKGVEF 126
Query: 170 I 170
+
Sbjct: 127 V 127
>gi|15966107|ref|NP_386460.1| 50S ribosomal protein L25 [Sinorhizobium meliloti 1021]
gi|334317111|ref|YP_004549730.1| 50S ribosomal protein L25 [Sinorhizobium meliloti AK83]
gi|384530239|ref|YP_005714327.1| 50S ribosomal protein L25 [Sinorhizobium meliloti BL225C]
gi|384535280|ref|YP_005719365.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti SM11]
gi|407721413|ref|YP_006841075.1| 50S ribosomal protein L25 [Sinorhizobium meliloti Rm41]
gi|418403160|ref|ZP_12976656.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti CCNWSX0020]
gi|71153163|sp|Q92N68.1|RL25_RHIME RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|15075377|emb|CAC46933.1| Putative 50S ribosomal protein L25 [Sinorhizobium meliloti 1021]
gi|333812415|gb|AEG05084.1| 50S ribosomal protein L25 [Sinorhizobium meliloti BL225C]
gi|334096105|gb|AEG54116.1| 50S ribosomal protein L25 [Sinorhizobium meliloti AK83]
gi|336032172|gb|AEH78104.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti SM11]
gi|359502844|gb|EHK75410.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti CCNWSX0020]
gi|407319645|emb|CCM68249.1| 50S ribosomal protein L25 [Sinorhizobium meliloti Rm41]
Length = 204
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 102/178 (57%), Gaps = 4/178 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G SR LR+ G +P +IYG + P+ I+++ + + F +++ +++
Sbjct: 9 AETRDRVGKGSSRELRRNGLIPAVIYGDKQPPLSIALSTKDVTMKIHAGGFMTTVATIDV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VL +++QL + +H DF RV ++ V+VP+HF N E SP +K +
Sbjct: 69 NGEKIRVLPKDYQLDPVRDFTMHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGAL-- 126
Query: 125 NVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N++ ++ ++ N+P+ + ++L +++ ++H+S++KLP G + + + + D T+AT
Sbjct: 127 NIVRHEVELNVSADNIPESLTVDLTGLKIGDTVHISNVKLPAGATPVIA-DRDFTVAT 183
>gi|344199408|ref|YP_004783734.1| 50S ribosomal protein L25 [Acidithiobacillus ferrivorans SS3]
gi|343774852|gb|AEM47408.1| 50S ribosomal protein L25 [Acidithiobacillus ferrivorans SS3]
Length = 202
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R++ G SR LR+ G VP ++YG K + +S+ ++ L + ++S++ L
Sbjct: 6 IAAEPREENGRRASRRLRRTGMVPAVLYGDGKPALGLSIEARLLRKLLPDDRAYTSVITL 65
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E E L+R+ Q+H YK+ VLH DF RV +++H+ VP+HF+N +K +
Sbjct: 66 EFPKGKETALIRDIQMHPYKEEVLHMDFLRVHAGERVHLHVPIHFLNETTCAGIKAGG-V 124
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ + ++ + LP+ IEI++ + V S+HLS I +P GV ++ +D
Sbjct: 125 LHRALVEVEVEAPVGRLPEAIEIDIGTLLVGESLHLSQITVPEGVILLPLQHDD 178
>gi|94971565|ref|YP_593613.1| 50S ribosomal protein L25 [Candidatus Koribacter versatilis
Ellin345]
gi|94553615|gb|ABF43539.1| LSU ribosomal protein L25P [Candidatus Koribacter versatilis
Ellin345]
Length = 233
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 96/178 (53%), Gaps = 4/178 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A RK G + +R +RK G VP +YG KDPV ++++ + L+ ET H++I +L
Sbjct: 8 VTAQSRKAGGKNDARRVRKTGMVPAAVYGAGKDPVAVTVDPKAVSKILRSETGHNTIFDL 67
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+ G E V++ ++Q K +LH D +R+ +K + V VP+ I + VK I
Sbjct: 68 AVNGGAEKVMIVDWQYEPLKGKLLHVDLKRIAMDKVLRVSVPV--ILQGTAEGVKNEGGI 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+ +I ++ I CLP ++P+ I ++ ++ ++ + D L G + T+ED +A
Sbjct: 126 LEQLIREVEIECLPADIPRAIFADVTPLKHGDNLRVKD--LAHGDKLKFITDEDQMVA 181
>gi|316935875|ref|YP_004110857.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5
[Rhodopseudomonas palustris DX-1]
gi|315603589|gb|ADU46124.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodopseudomonas palustris DX-1]
Length = 229
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 7/187 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R K G +R R+ G+VPG+IYG N+ P+ IS+ + + F ++I
Sbjct: 5 LELKATARPKSGKGAARAERRAGRVPGVIYGDNQPPLPISVEEKELRLRILAGRFLTTIF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + G+ V+ R++ L K LH DF R+ I + VPLH E++P VK
Sbjct: 65 DVVLDGQKHRVIPRDYHLDPVKDFPLHVDFLRLGAGATIRISVPLHLKGLEVAPGVKRGG 124
Query: 121 C--IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
I+++ + + N+P+FIE ++ +++ S+HLSDI LP GV + + ED T
Sbjct: 125 TFNIVTHTVD---LEAPADNIPQFIEADVSNLDIGVSLHLSDIALPTGVKSV--SREDVT 179
Query: 179 IATAIIP 185
+ T + P
Sbjct: 180 LVTIVPP 186
>gi|15889503|ref|NP_355184.1| 50S ribosomal protein L25 [Agrobacterium fabrum str. C58]
gi|335033843|ref|ZP_08527207.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
sp. ATCC 31749]
gi|71153115|sp|Q8UDA0.1|RL25_AGRT5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|15157377|gb|AAK87969.1| 50S ribosomal protein L25 [Agrobacterium fabrum str. C58]
gi|333794728|gb|EGL66061.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
sp. ATCC 31749]
Length = 202
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R++ G SR LR+ G +P +IYG + P+ I+++ N + + F +++ +++
Sbjct: 10 AEARERVGKGSSRELRRNGLIPAVIYGDKQAPISIALSTNEVTKRIHAGGFMTTVGTIDV 69
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK VL +++QL + +H DF RV ++V++P+HF N E S +K+ +++
Sbjct: 70 DGKKIKVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEIPVHFENEEKS-DIKIGG-VLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V + C ++P+ I ++L +++ S+H+S++KLP+ ++ + + + D TIAT +
Sbjct: 128 IVRHTVEFHCPANDIPEAITVDLSGLKIGDSVHISNVKLPKNITPVIA-DRDFTIATIVA 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|146342827|ref|YP_001207875.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 278]
gi|146195633|emb|CAL79660.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 278]
Length = 191
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 4/132 (3%)
Query: 55 FHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
F ++I ++ + GK V+ R+F L K +H DF R+ I V VPLH + SE SP
Sbjct: 15 FLTTIFDVTLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLHVVGSEGSP 74
Query: 115 AVKLNSCIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST 173
VK + N+++ L + CL +N+P+FIE ++ +E+N S+H+SD+KLP GV + S
Sbjct: 75 GVKRGGTV--NIVTHTLELECLAENIPQFIEADVSALEINHSLHVSDVKLPTGVKTL-SR 131
Query: 174 EEDPTIATAIIP 185
ED T+ T + P
Sbjct: 132 GEDATLVTIVPP 143
>gi|189425650|ref|YP_001952827.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter
lovleyi SZ]
gi|226736326|sp|B3E6G0.1|RL25_GEOLS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189421909|gb|ACD96307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter
lovleyi SZ]
Length = 194
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G SR LR G++PGI+YG +PV IS+ + A+ E ++++ LE G
Sbjct: 11 RSSTGKGISRKLRAAGRIPGIVYGRGMEPVAISLEPKALNAAIAGEGGLNNLITLEGGGD 70
Query: 68 VE--LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
++ +V++ Q A K+ H D RV+ +K+ V VP+ + + + VK ++
Sbjct: 71 LDKVVVIVAEIQRDALKRTPEHVDLHRVNMSEKVRVNVPVSLVGT--AAGVK-EGGLLDF 127
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
L+I CLP +P+ IEIN+ +++ +IH+S+I P GV I
Sbjct: 128 AHHSLHIECLPGQIPEHIEINIADLKIGHAIHVSEISFPAGVKCI 172
>gi|451980523|ref|ZP_21928912.1| 50S ribosomal protein L25 [Nitrospina gracilis 3/211]
gi|451762259|emb|CCQ90146.1| 50S ribosomal protein L25 [Nitrospina gracilis 3/211]
Length = 218
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+++G++ +R LR G +PG+IYG +DPV I++NH + ++ ++++NL +
Sbjct: 10 REQRGSAANRRLRTEGLLPGVIYG-QQDPVSITVNHKDLRKLIEAYGI-NTLINLSVESD 67
Query: 68 V---ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
V++++ Q H ++ H DF VD +KI VP+ SPA KL I+
Sbjct: 68 SVPKRTVIVKDHQSHPIREGWEHVDFYEVDMTEKIKTVVPILLDGK--SPAEKLGG-IVE 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
+ +L+I CLP ++P I++++ K+ ++ +H+SD+ LP G+ VI EE
Sbjct: 125 KSLDELHIRCLPGDIPHDIKVDMTKVGMDQVVHVSDLTLPAGIEVIDDPEE 175
>gi|294678566|ref|YP_003579181.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003]
gi|294477386|gb|ADE86774.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003]
Length = 199
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A R G +R R+ GKVPGI+YG K+P+ I++++N + L+K F S++ NL
Sbjct: 8 LVAEVRTGTGKGAARAARREGKVPGIVYGDGKEPLAINLDYNKLLTRLRKGRFLSTLFNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
I G+ ++ V+ R Q K L H DF R +I++ + ++F N+E SP +K
Sbjct: 68 HIEGQDDVRVICRGVQKDVVKDLPTHIDFMRTHRASRINLFIHVNFDNAEASPGLKRGGT 127
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
++ V ++ + L ++P I ++L + IH++DI LP G
Sbjct: 128 -LTIVRPEVELEVLAGDIPDHITVDLTGRNIGDVIHINDIPLPEG 171
>gi|407798258|ref|ZP_11145166.1| hypothetical protein OCGS_0239 [Oceaniovalibus guishaninsula
JLT2003]
gi|407059694|gb|EKE45622.1| hypothetical protein OCGS_0239 [Oceaniovalibus guishaninsula
JLT2003]
Length = 226
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A ER G +R R+ G VPGI+YGG DP+ I++ +N + LK F S++ NL
Sbjct: 13 IQAMERTGTGKGAARQARRDGYVPGIVYGGGTDPLPINLPYNALIKHLKAGRFLSTLFNL 72
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G ++ V+ RN Q K L H D R+ ++++ +P+ E SP +K
Sbjct: 73 KVEGHEDVRVICRNVQRDVVKDLPTHVDLMRLRRTSRVNLFIPVELTGEEQSPGLK-KGG 131
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+++ V ++ + C ++P+ I ++ +M++ ++ +S +++P G
Sbjct: 132 VLTMVRPEVELRCTAGDIPEKIVGDVSQMDIGDTLTISMMQMPEG 176
>gi|39937416|ref|NP_949692.1| 50S ribosomal protein L25 [Rhodopseudomonas palustris CGA009]
gi|192293199|ref|YP_001993804.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris TIE-1]
gi|68053168|sp|Q6N1P8.3|RL25_RHOPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC; AltName: Full=RRP-L25
gi|226736356|sp|B3Q7X4.1|RL25_RHOPT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|39651275|emb|CAE29797.1| putative 50S ribosomal protein L25 [Rhodopseudomonas palustris
CGA009]
gi|192286948|gb|ACF03329.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodopseudomonas palustris TIE-1]
Length = 230
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R K G +R R+ G+VPG+IYG N+ P+ IS+ + + F +++
Sbjct: 5 LELKATARPKSGKGAARAERRAGRVPGVIYGDNQSPLPISVEEKELRLRILAGRFLTTVF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + GK V+ R++ L + +H DF R+ I V VPLH E++P VK
Sbjct: 65 DVVLDGKKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLKGLEVAPGVKRGG 124
Query: 121 CIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
N+++ + + +N+P+FIE ++ +++ S+HLSDI LP GV + + +D T+
Sbjct: 125 TF--NIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKSV--SRDDVTL 180
Query: 180 ATAIIP 185
T + P
Sbjct: 181 VTIVPP 186
>gi|167629342|ref|YP_001679841.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5
[Heliobacterium modesticaldum Ice1]
gi|226736327|sp|B0TBA3.1|RL25_HELMI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|167592082|gb|ABZ83830.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5
[Heliobacterium modesticaldum Ice1]
Length = 231
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 7/203 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R+K + + LRK G +P ++YG +K + IS+N + LK S+IL+L++
Sbjct: 8 AIRREKGSRGYIKELRKRGLLPAVVYGKDKPDMLISVNAKELSGLLKAMGSASAILDLQV 67
Query: 65 YGKVEL--VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
G + V+L+ Q ++ H DFQ VD K +H ++P+H + +PA I
Sbjct: 68 EGSDDRHKVMLKEMQRDPVGRMPNHVDFQLVDWNKPVHAEIPIHLVG---TPAGVKAGGI 124
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
I + + + + LP LP +I++ +E++ + ++DI P G+++I +E D I +
Sbjct: 125 IQHGLRTVEVEGLPGKLPPRFDIDISHLELHDKMTVADITSPAGIAII--SEPDQVILSI 182
Query: 183 IIPVNTLESDNNSSIEKEKNNNS 205
I+P LE ++ + +E +
Sbjct: 183 IVPRAVLEPAESAPVLEENGDKG 205
>gi|34499512|ref|NP_903727.1| 50S ribosomal protein L25 [Chromobacterium violaceum ATCC 12472]
gi|71153134|sp|Q7NQT0.1|RL25_CHRVO RecName: Full=50S ribosomal protein L25
gi|34105362|gb|AAQ61717.1| 50S ribosomal protein L25 [Chromobacterium violaceum ATCC 12472]
Length = 95
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
++IA +R GT SR LR+ GK+P ++YG KD V + ++HN +YHA+K FH+S+L
Sbjct: 4 ELIAAKRVDLGTGASRRLRRAGKLPAVVYGAGKDAVSLELDHNTLYHAVKHADFHTSVLE 63
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRV 93
L I G+ E V + FQ+H YK+ VLH DF RV
Sbjct: 64 LVIDGQKEQVKVAAFQMHPYKQQVLHIDFARV 95
>gi|333977661|ref|YP_004515606.1| 50S ribosomal protein L25 [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821142|gb|AEG13805.1| 50S ribosomal protein L25 [Desulfotomaculum kuznetsovii DSM 6115]
Length = 211
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A R +G + L GK+P ++YG + + + + + L E ++++NL
Sbjct: 5 LLAQVRTGRGKGYRHRLAAQGKIPAVVYGKAIGNIPVEVELRALKNILAGEGGRNTLINL 64
Query: 63 EIYG----KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
+I G + + VL++ Q + + ++HADFQ+V +KI VP+ E P
Sbjct: 65 KITGEGQERQDKVLIKELQYDSLRGELIHADFQQVSLTEKITTTVPVEL---EGEPVGVK 121
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPT 178
I+ + +L ISCLP ++P+ I +++ +E+ ++H++D+ +P GV V++ EE
Sbjct: 122 QGGILQQQLRELEISCLPADIPEVITMDISGLEMGDTVHVADLPVPAGVKVLNDPEE--V 179
Query: 179 IATAIIP 185
+AT + P
Sbjct: 180 VATVVAP 186
>gi|198283910|ref|YP_002220231.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666710|ref|YP_002426544.1| 50S ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|415991520|ref|ZP_11560066.1| ribosomal protein L25 [Acidithiobacillus sp. GGI-221]
gi|198248431|gb|ACH84024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518923|gb|ACK79509.1| ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|339835275|gb|EGQ62967.1| ribosomal protein L25 [Acidithiobacillus sp. GGI-221]
Length = 202
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R+ G SR LR+ G VP ++YG K + I + ++ L E ++ ++ L
Sbjct: 6 IAAQPREDIGRRASRRLRRTGMVPAVLYGDGKAAMGICIEARLLRKLLPDERAYTHVITL 65
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ G E L+R+ Q+H YK+ VLH DF RV +++ + VP+HF+N +K +
Sbjct: 66 QLPGSKETALIRDIQMHPYKEEVLHMDFLRVHAGEQVRLHVPVHFLNESTCAGIKAGG-V 124
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ + ++ + LP+ +++++ + + S+HLS I +P GV+++ ED
Sbjct: 125 LHRALVEVEVEAPVDRLPEALQVDIAGLHIGDSLHLSQISVPAGVTLVPLLHED 178
>gi|254470593|ref|ZP_05083997.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062]
gi|374332778|ref|YP_005082962.1| 50S ribosomal protein L25 [Pseudovibrio sp. FO-BEG1]
gi|211960904|gb|EEA96100.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062]
gi|359345566|gb|AEV38940.1| 50S ribosomal protein L25 [Pseudovibrio sp. FO-BEG1]
Length = 204
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 4/174 (2%)
Query: 23 GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYK 82
G VP +IYG K+ V I++ L K F S + +++ G+ V+ ++FQLH K
Sbjct: 27 GLVPAVIYGDKKEAVSINLPLKEATMTLHKGGFLSHVGTIDLNGEKTSVIAKDFQLHPVK 86
Query: 83 KLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN-LPK 141
++H DF RV + + V++P+ F+N E SP +K + NV+ +P +P+
Sbjct: 87 DTLMHVDFLRVSADATLTVEIPVKFLNEETSPGLKRGGVL--NVVRHTVEMTVPATAIPE 144
Query: 142 FIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVNTLESDNNS 195
IE++L + ++ +S H+S +KLP G + T+ D TI+T P E+D S
Sbjct: 145 AIEVDLAEADLGSSQHISAVKLPAGCAPT-ITDRDFTISTIAAPAGLKEADEAS 197
>gi|68171276|ref|ZP_00544677.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa]
gi|67999291|gb|EAM85939.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa]
Length = 189
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 14/190 (7%)
Query: 16 SRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRN 75
SR LR G++P +IYG +D + IS+++ + + ++ LEI K E VL+R+
Sbjct: 1 SRALRLSGEIPAVIYGKGRDSLSISLSNREFVSKYRSAALSTHLIELEIDNKKEYVLMRD 60
Query: 76 FQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI-SDLYISC 134
Q H + H DFQ +D +I ++VPL F N + +K + N++ L I C
Sbjct: 61 VQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGGVL--NILHRTLSIKC 118
Query: 135 LPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVNTLESDNN 194
PK + + IEI+L + SIH+SD+KLP V+V E +P I T ++
Sbjct: 119 SPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMK-EHNPAIVTI----------SS 167
Query: 195 SSIEKEKNNN 204
+S EKE +N
Sbjct: 168 ASTEKEAESN 177
>gi|312880020|ref|ZP_07739820.1| LSU ribosomal protein L25P [Aminomonas paucivorans DSM 12260]
gi|310783311|gb|EFQ23709.1| LSU ribosomal protein L25P [Aminomonas paucivorans DSM 12260]
Length = 217
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSIL 60
K++ R++ GT R LR G +P ++YG + K + + + + + ++IL
Sbjct: 6 KVVFRSREETGTGVCRKLRVEGLIPAVLYGPAFPEGKKGVVGYKEVLPVVSSSHWETTIL 65
Query: 61 NLEIY-GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L++ G+ E+ L+R Q HA + LH DF ++ + KI VKVP+H N + VKL
Sbjct: 66 ELDLGDGRQEMALMREIQRHALTRSPLHIDFLQLVKDHKIRVKVPVHLDNRDTCAGVKLG 125
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP-T 178
++ + +L + LP+++P+ I +N++ + +N I +SD+ LP+G + + +DP +
Sbjct: 126 G-LLEQFLYELEVEVLPQDIPEQIRLNVQGLGMNKEIKVSDVPLPQGATWV----QDPDS 180
Query: 179 IATAIIP 185
+ +++P
Sbjct: 181 VVVSLVP 187
>gi|86751268|ref|YP_487764.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris HaA2]
gi|109893387|sp|Q2ISF7.1|RL25_RHOP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|86574296|gb|ABD08853.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris HaA2]
Length = 240
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M+ A R K G +R R+ G+VPG+IYG NK P+ IS+ + ++ F ++I
Sbjct: 5 MEFKATARPKSGKGAARAERRAGRVPGVIYGDNKPPLPISVEDKDLRLRIQAGRFLTTIF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + G+ V+ R++ L K +H DF R+ I + VPLH E +P VK
Sbjct: 65 DVVLDGQKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLHLKGLESAPGVKRGG 124
Query: 121 CIISNVISDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
N+++ P + +P+FIE ++ +++ S+HLSDI LP+GV + + ED T+
Sbjct: 125 TF--NIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGVKSV--SREDVTL 180
Query: 180 ATAIIP 185
T + P
Sbjct: 181 VTIVPP 186
>gi|340781438|ref|YP_004748045.1| 50S ribosomal protein L25p [Acidithiobacillus caldus SM-1]
gi|340555591|gb|AEK57345.1| LSU ribosomal protein L25p [Acidithiobacillus caldus SM-1]
Length = 209
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A ER G SR LR+ G+VP ++YG K +S+ ++ L E ++++ L
Sbjct: 8 IPARERDGHGRRHSRRLRREGQVPAVLYGDGKPANPLSLEARVLRKLLADERVFTNVITL 67
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E + E L+R+ Q+H YK+ VLH DF RV +++ + VP+HF N VK + +
Sbjct: 68 EFPDRKETALIRDLQMHPYKEEVLHVDFLRVHAGERVTLHVPIHFENEATCVGVK-SGGV 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ + ++ + LP+ I +++ +++V SIHLS I +P GV ++ + +D
Sbjct: 127 LHRALVEVVVEAPVGQLPEAIVVDIAQLQVGESIHLSQIPVPAGVKLVPLSHDD 180
>gi|91978462|ref|YP_571121.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris BisB5]
gi|123721572|sp|Q131L9.1|RL25_RHOPS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91684918|gb|ABE41220.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB5]
Length = 234
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 5/186 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M++ A R K G +R R+ G+VPG+IYG N+ P+ IS+ + + F +++
Sbjct: 5 MELKATARPKSGKGAARAERRAGRVPGVIYGDNQPPLPISVEDKELRLRILAGRFLTTVF 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + GK V+ R++ L K +H DF R+ I V VPLH E +P VK
Sbjct: 65 DVVLDGKKHRVIPRDYHLDPVKDFPIHVDFLRLGAGATIRVSVPLHLKGLESAPGVKRGG 124
Query: 121 CIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
N+++ + + +++P+FIE ++ +++ S+HLSDI LP GV + + ED T+
Sbjct: 125 TF--NIVTHTVDLEAPAESIPQFIEADVSTLDIGVSLHLSDIALPNGVKSV--SREDVTL 180
Query: 180 ATAIIP 185
T + P
Sbjct: 181 VTIVPP 186
>gi|118579182|ref|YP_900432.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter
propionicus DSM 2379]
gi|166223702|sp|A1AM04.1|RL25_PELPD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|118501892|gb|ABK98374.1| LSU ribosomal protein L25P [Pelobacter propionicus DSM 2379]
Length = 199
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R K G SR LR VPG++YG DP+ +S+N+ + A+ E ++++ L G
Sbjct: 11 RSKTGKGISRKLRSADMVPGVVYGKGMDPMAVSINYRELQAAMAGEGGQNNLITLVGGGS 70
Query: 68 VE--LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
++ + ++ + Q A K H D RV+ +K+ V VP+ + I VK ++
Sbjct: 71 LDQSMAIVADLQRDAVKGTYKHVDLHRVNMSEKLRVTVPVVLKGTAI--GVK-EGGLLDF 127
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+L++ CLP N+P IEI++ + V SIH+ +I LP GV V+
Sbjct: 128 AHHELHVECLPGNIPDHIEIDVTSLAVAHSIHVGEIALPEGVKVL 172
>gi|255020869|ref|ZP_05292925.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756]
gi|254969660|gb|EET27166.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756]
Length = 209
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A ER G SR LR+ G+VP ++YG K +S+ ++ L E ++++ L
Sbjct: 8 IPARERDGHGRRPSRRLRREGQVPAVLYGDGKPANPLSLEARVLRKLLADERVFTNVITL 67
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E + E L+R+ Q+H YK+ VLH DF RV +++ + VP+HF N VK + +
Sbjct: 68 EFPDRKETALIRDLQMHPYKEEVLHVDFLRVHAGERVTLHVPIHFENEATCVGVK-SGGV 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ + ++ + LP+ I +++ +++V SIHLS I +P GV ++ + +D
Sbjct: 127 LHRALVEVEVEAPVGQLPEAIVVDIAQLQVGESIHLSQITVPAGVKLVPLSHDD 180
>gi|406672157|ref|ZP_11079390.1| ribosomal protein L25, Ctc-form [Facklamia hominis CCUG 36813]
gi|405579280|gb|EKB53392.1| ribosomal protein L25, Ctc-form [Facklamia hominis CCUG 36813]
Length = 202
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 99/185 (53%), Gaps = 8/185 (4%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M I A R K GT S+ R+ GK+P +YG + + ++ + AL K +++
Sbjct: 1 MSIKAELRTKTGTGASKQARREGKIPATLYGKEVEATSLLVSARE-FEALLKAEGSNAVF 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E GK + V+L++F+ + K D + + +K+ V+VPL +N E VK+
Sbjct: 60 DVEFDGKTQQVILKDFEKASLKDHFYSIDLEAISANQKLQVEVPLVLLNEE---TVKVG- 115
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I++ V + + I P N+P EI+++ ME+ + +SD++LP GV ++ EE TI
Sbjct: 116 -IVAQVFNTIEIETTPANIPNAFEIDVKGMEIGDTKSISDLELPAGVEILEDAEE--TIV 172
Query: 181 TAIIP 185
+ I P
Sbjct: 173 SVIAP 177
>gi|296114646|ref|ZP_06833299.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter hansenii ATCC 23769]
gi|295979002|gb|EFG85727.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter hansenii ATCC 23769]
Length = 206
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG-KVELVLLRNFQL 78
R+ G VPG+IYGG ++ V I+++ ++ L K + S I ++ I G K E LLR QL
Sbjct: 24 RRAGLVPGVIYGGKQEAVLIALDPRIVARELHKPGWRSRIYDISIDGSKTEHALLREIQL 83
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN 138
H + LH D+QR+ +K+HV+V + F E+SP +K +++ V + + P N
Sbjct: 84 HPVSDVPLHVDYQRLAEGQKVHVEVSITFTGEEVSPGIK-RGGVLNIVRHTVDVVADPAN 142
Query: 139 LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVNTLE 190
+P+ +L K++++ ++ D+K G + + P A I T+E
Sbjct: 143 MPEGFSADLSKLDIHDNVRWEDLK---GTEHVTPVQHIPNFVIATIAAPTVE 191
>gi|365882889|ref|ZP_09422075.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 375]
gi|365288782|emb|CCD94606.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 375]
Length = 189
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
Query: 55 FHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
F ++I ++ + GK V+ R+F L K +H DF R+ I V VPLH + SE +P
Sbjct: 15 FLTTIFDISLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLHVVGSEGAP 74
Query: 115 AVKLNSCIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST 173
VK + N+++ L + CL +N+P+FIE ++ +E+N S+H+SD+KLP GV + +
Sbjct: 75 GVKRGGTV--NIVTHTLDLECLAENIPQFIEADVSALEINHSLHISDVKLPTGVKTL--S 130
Query: 174 EEDPTIATAIIP 185
+D T+ T + P
Sbjct: 131 RDDATLVTIVPP 142
>gi|349700870|ref|ZP_08902499.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter europaeus LMG 18494]
Length = 206
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQL 78
R+ G VPG+IYGG ++P I+++ +++ L K + S I ++ + G + LLR QL
Sbjct: 24 RRAGHVPGVIYGGGQEPTLIALDPRIVHRELHKSGWRSRIYDISVAGGPSVHALLREIQL 83
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN 138
H LH D+QR+ K+HV+V + F E+SP VK +++ V + + P N
Sbjct: 84 HPVTDAPLHVDYQRLAAGHKVHVEVEVRFTGEELSPGVK-RGGVMNIVRHTVDVVVDPAN 142
Query: 139 LPKFIEINLEKMEVNTSIHLSDIK 162
+P+F +L K++ + ++ D+K
Sbjct: 143 IPEFFTADLSKLDFHDNVRWEDLK 166
>gi|367471859|ref|ZP_09471458.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 285]
gi|365275834|emb|CCD83926.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 285]
Length = 189
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
Query: 55 FHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
F ++I ++ + GK V+ R+F L K +H DF R+ I V VPLH + SE +P
Sbjct: 15 FLTTIFDISLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLHVVGSEGAP 74
Query: 115 AVKLNSCIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST 173
VK + N+++ L + CL +N+P+FIE ++ +E+N S+H+SD+KLP GV + +
Sbjct: 75 GVKRGGTV--NIVTHTLDLECLAENIPQFIEADVSALEINHSLHISDVKLPTGVKTL--S 130
Query: 174 EEDPTIATAIIP 185
+D T+ T + P
Sbjct: 131 RDDSTLVTIVPP 142
>gi|315122138|ref|YP_004062627.1| 50S ribosomal protein L25 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495540|gb|ADR52139.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 191
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ R+K G SR LR+ GK+P IYG P I+++ I L + F ++I
Sbjct: 7 KLKTITREKVGKGSSRLLRRNGKIPATIYGNISSPKSIALSTKDISKRLYSKHFMTTIFT 66
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+++ + VL +++QL +++H DF ++ + I V+VP+ FIN SP +K+
Sbjct: 67 IDLGKESIRVLPKDYQLDPVSDVLIHMDFLQISEKSTISVQVPIRFINQNKSPGLKMGGS 126
Query: 122 IISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+ N+I ++ + C +P I +L+ +++ +IH++DI+LP G++ + + + TIA
Sbjct: 127 L--NIICHEIPLLCPANKIPDSISADLDGLKIGDNIHMTDIRLPEGITSV--SHANSTIA 182
Query: 181 TAIIPVNT 188
P+++
Sbjct: 183 KISAPISS 190
>gi|95930456|ref|ZP_01313192.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfuromonas acetoxidans DSM 684]
gi|95133496|gb|EAT15159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfuromonas acetoxidans DSM 684]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G +R+ R+ G VPG++YG +P +++ + A+ E +++L L+ G
Sbjct: 11 RERVGKGGARSARRNGLVPGVVYGPGIEPCTVNVEPKALQEAISGEAGWNTLLTLKGDGP 70
Query: 68 VELVL--LRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
+ VL +++ Q+ A ++ H DFQ +D+ K + VP++ + N +I
Sbjct: 71 FDGVLAVVKDIQVDAIRRDATHVDFQAIDSNKMLSFMVPVNAVGKSAGEKAGGNLQVIR- 129
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHS 172
+L + CLP N+P I+I++E +E+ +H+ D+ P GV + H
Sbjct: 130 --KELEVVCLPANVPGHIDIDVEALEIGDVVHIDDVTAPEGVELPHD 174
>gi|262276844|ref|ZP_06054637.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114]
gi|262223947|gb|EEY74406.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114]
Length = 235
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R K S LR G VPGI+YG + +S+ + + H LK F S + +
Sbjct: 8 IEAVLRSTKTKSELNKLRSEGFVPGILYGDIDKNINLSVKKSTLDHFLKTTNFKSKVFKI 67
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+ GK VL R+ + +H DFQ++ T K+ V +P+ F+N E P +K+ +
Sbjct: 68 NLDGKEYEVLPRDIEFENISNQPIHVDFQKLSTNTKVVVWIPVKFLNEETCPGLKMGG-V 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
++ V + + C +P + ++L K E+ SIH+S I LP GV V + D TIAT
Sbjct: 127 LNIVRRKVELDCPADKIPSELNVDLAKREIGESIHISAINLPEGV-VPTIKDRDFTIATV 185
Query: 183 IIPV 186
P
Sbjct: 186 AAPT 189
>gi|349687297|ref|ZP_08898439.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter oboediens 174Bp2]
Length = 206
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 82/144 (56%), Gaps = 2/144 (1%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQL 78
R+ G VPG+IYGG ++P+ I+++ ++ L K + S I ++ + G + LLR QL
Sbjct: 24 RRAGHVPGVIYGGGQEPILIALDPRIVNRELHKAGWRSRIYDISVEGGASVHALLREIQL 83
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN 138
H LH D+QR+ K+HV+V + F ++SP VK +++ V + + P N
Sbjct: 84 HPVTDAPLHVDYQRLAAGHKVHVEVEVRFTGEDVSPGVK-RGGVMNIVRHTVDVVVDPAN 142
Query: 139 LPKFIEINLEKMEVNTSIHLSDIK 162
+P+F +L K++ + ++ +D+K
Sbjct: 143 IPEFFTADLSKLDFHDNVRWNDLK 166
>gi|162455217|ref|YP_001617584.1| 50S ribosomal protein L25/general stress protein Ctc [Sorangium
cellulosum So ce56]
gi|189042374|sp|A9GXJ8.1|RL25_SORC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161165799|emb|CAN97104.1| 50S ribosomal protein L25 [Sorangium cellulosum So ce56]
Length = 229
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 98/186 (52%), Gaps = 6/186 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ A R+ G S S LR+ G++P I YG P ++++ + L + +S++
Sbjct: 4 IKLNATRREDSGKSASSRLRRAGQIPAIAYGRELAPQSVAISPKALLQVLGSDHGKNSVV 63
Query: 61 NLEIY-GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L I G+ V++R++ H + ++HADF +V ++ + V++P + P +
Sbjct: 64 ELAIENGQTLTVMVRDYDYHPISRELVHADFIQVKLDQPVDVQIPFRCVGK---PKGVVT 120
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ + + + CLP+ +P FIEI++ ++++ S S +KLP GV + + +D TI
Sbjct: 121 GGVLQQIFRTIPVRCLPEKIPSFIEIDVTELDLGDSYKASGLKLPEGVKTLLA--DDQTI 178
Query: 180 ATAIIP 185
A P
Sbjct: 179 AVVNAP 184
>gi|383454411|ref|YP_005368400.1| 50S ribosomal protein L25 [Corallococcus coralloides DSM 2259]
gi|380734215|gb|AFE10217.1| 50S ribosomal protein L25 [Corallococcus coralloides DSM 2259]
Length = 229
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 96/166 (57%), Gaps = 4/166 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGN-KDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R+ G +R LR G+VP ++YG + K P+ IS++ I A+ ++++ L+
Sbjct: 10 AQAREGSGKGIARRLRAAGQVPAVVYGKHLKAPLHISVDPKAIRTAINTPHKLNTLIQLK 69
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G + VLL+++Q+ + +LHADF V ++++ V +P+ A + ++
Sbjct: 70 LAGNDQQVLLKDYQMDPLTRDILHADFIAVTEKEQVKVNLPVVLTGKAAGVA---DGGLL 126
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ V +L + LP N+P IE+++ +++ ++H++D+KLP GVSV
Sbjct: 127 TQVRRNLEVWALPGNIPLQIEVDVTNLKIAEALHVNDVKLPEGVSV 172
>gi|410945051|ref|ZP_11376792.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter
frateurii NBRC 101659]
Length = 219
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELV-LLRNFQL 78
R+ G VP +IYGG ++P I+++ +I L + + S + NL G + L+R+ QL
Sbjct: 24 RRAGLVPAVIYGGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGAEPVAALIRDVQL 83
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISD-LYISCLPK 137
H +H DFQRV K+HV+V + F E +P +K + NV+ + ++ P
Sbjct: 84 HPVSDAPIHVDFQRVSAGTKVHVEVSIVFTGEEKAPGIKRGGVL--NVVRHYVDVAADPA 141
Query: 138 NLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
N+P+ +L ++++ S+ +D+K GVS+ D IA+ P
Sbjct: 142 NIPEHFTADLSALDIHDSVRWADLKGTEGVSLTGGQATDIVIASVAPP 189
>gi|282881840|ref|ZP_06290493.1| ribosomal protein L25, Ctc-form [Peptoniphilus lacrimalis 315-B]
gi|281298332|gb|EFA90775.1| ribosomal protein L25, Ctc-form [Peptoniphilus lacrimalis 315-B]
Length = 210
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
RK+ G + LR G VPG+IYG +++P+ +S + N+I L +E S I+ +EI G+
Sbjct: 9 RKEHGKNQVDKLRAEGIVPGVIYGKDREPLNVSGHENVILK-LFQEVGTSVIIEVEIDGQ 67
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL + Q+H +K +LH D +D I V VP+ I + +K+ + VI
Sbjct: 68 KTSVLFKEVQMHPFKNNMLHFDLYEIDMNHPITVVVPVVLIGRD---EIKVQPSNLIQVI 124
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+++ +SCLPK LP ++ + M++ +I ++D+ + + ++ + E D +AT P
Sbjct: 125 NEVEVSCLPKYLPSTADVEVTDMQIGDTITVADLDISKDENIEVALEADEVVATLSAP 182
>gi|374313560|ref|YP_005059990.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Granulicella
mallensis MP5ACTX8]
gi|358755570|gb|AEU38960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Granulicella
mallensis MP5ACTX8]
Length = 225
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 93/166 (56%), Gaps = 5/166 (3%)
Query: 16 SRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK-VELVLLR 74
+R +R G +P ++YG ++ V ++++ +I L E+ H++I +L I GK V++
Sbjct: 23 ARRVRVSGLIPAVVYGAGQESVAVTVDPRVITKILYSESGHNTIFDLAIEGKGTNKVMIV 82
Query: 75 NFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISC 134
++Q K +LH D +R+ +K + V VP+ I + VK ++ V+ ++ + C
Sbjct: 83 DWQHEPIKGKLLHIDLKRIAMDKAMRVSVPVQLIGVPV--GVKTGGGVLGQVLHEVEVEC 140
Query: 135 LPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
LP ++P I+I++ +E+N +IH+SD LP + EED +A
Sbjct: 141 LPGDIPDHIDIDVANLEINGAIHISD--LPHSDKLKFLGEEDALVA 184
>gi|258404967|ref|YP_003197709.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfohalobium retbaense DSM 5692]
gi|257797194|gb|ACV68131.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfohalobium retbaense DSM 5692]
Length = 213
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 99/185 (53%), Gaps = 10/185 (5%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSS-I 59
+++ AF+R + G R++R+ G +PGI Y D V + + + + A +K HS+ +
Sbjct: 5 IRLQAFKRDEVGKQGLRSVRQQGYIPGIYYDAKGDNVPVKVRYRALESAFRKA--HSNHV 62
Query: 60 LNLEI----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPA 115
+ LEI G V++ + Q H K L+LH DF VD K+I V++P+ I E
Sbjct: 63 IQLEIANGGQGTPRPVMIWDIQHHPVKDLILHVDFFGVDMSKEIQVEIPVQ-IEGEAQGV 121
Query: 116 VKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
V + + L +SCLP +P+ I I++ +E+N ++++ D+ P GV ++ EE
Sbjct: 122 VDGGQLTVYH--EALLVSCLPDAIPENIRIDVSALEMNENVNIEDVTFPEGVVPVYDGEE 179
Query: 176 DPTIA 180
+ +A
Sbjct: 180 NFAVA 184
>gi|149916128|ref|ZP_01904650.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b]
gi|149809983|gb|EDM69832.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b]
Length = 220
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 93/165 (56%), Gaps = 2/165 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER G +R +R+ VPGI++GG+ DP+ I + +N++ LK+ F S++ NL++
Sbjct: 14 AQERTGTGKGAARAVRRAHMVPGIVFGGDVDPLPIQIPYNVLIKKLKEGRFKSTLFNLKV 73
Query: 65 YGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G ++ V+ R+ Q K L H D R+ KI++ +P+ F +++P +K ++
Sbjct: 74 EGHDDVRVICRDVQRDVVKDLPTHLDLMRLRRTTKINLFIPVTFTGEDVAPGLK-KGGVL 132
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
+ V +++ + ++P+ + ++L M++ ++ +S + LP G
Sbjct: 133 TVVRNEIELVVTAGDIPEEVTVDLSGMDIGDTLTISQVTLPEGAQ 177
>gi|196229514|ref|ZP_03128379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Chthoniobacter flavus Ellin428]
gi|196226746|gb|EDY21251.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Chthoniobacter flavus Ellin428]
Length = 281
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 8/173 (4%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
K+ A R + G S +++ G VP ++YGG + P+ +S+N I + L T ++
Sbjct: 5 QKLTALTRTETGRSAVNKIKQQGLVPAVVYGGKEQPINLSVNAREIRNILAHATSEHFLV 64
Query: 61 NLEIYGKV----ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPA- 115
+LEI L L++ Q K VLH DF V ++K+H ++P+ + PA
Sbjct: 65 DLEIADGSNKSNRLALVQEVQHDPLKGDVLHVDFHAVKADEKLHAEIPVETVG---EPAG 121
Query: 116 VKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
VK I+ + + + CLPK+LP+ I +++ + V IH+ DIK P GV+
Sbjct: 122 VKNYGGILEISMHAIEVECLPKDLPEIITLDVSALNVGEGIHIKDIKFPEGVT 174
>gi|296284047|ref|ZP_06862045.1| 50S ribosomal protein L25/general stress protein Ctc
[Citromicrobium bathyomarinum JL354]
Length = 226
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G SR LR+ G+VP +IYGG ++P I + + L F +SI+ LE+
Sbjct: 9 AETRDRAGKGASRALRREGRVPAVIYGGKEEPTPIHVEERELVRQLDTGHFMNSIIELEV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK L ++ LH H DF R+ K+ V VP+ F++ E SP +K +++
Sbjct: 69 GGKKVRTLPKDVALHPVTDRPEHVDFLRLTKGAKVDVSVPVVFVDEEESPGLK-KGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V +L + C +P I I+++ EV SIH+S++ LP+G S T+ D TIAT +
Sbjct: 128 VVRHELELVCEADKIPGEITISVKGKEVGDSIHISEVDLPKG-SESAITDRDFTIATLVA 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|399991704|ref|YP_006571944.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400753343|ref|YP_006561711.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis 2.10]
gi|398652496|gb|AFO86466.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis 2.10]
gi|398656259|gb|AFO90225.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 209
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 101/192 (52%), Gaps = 4/192 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++ ER G +R R+ G VPG+++GG+ DPV I + N + LK F S++ NL
Sbjct: 8 LVCQERTGSGKGAARAARRAGMVPGVVFGGDADPVSIQIPFNELLKKLKAGRFKSTLWNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G+ ++ V+ R+ Q K L H D R+ K+++ VP+ FIN E +P +K
Sbjct: 68 KVEGQEDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKVNLFVPVEFINEEEAPGIK-RGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+++ V ++ + ++P+ + ++L + V ++ +S IKLP G + + D +A
Sbjct: 127 VLTAVRPEVELVVTAGDIPEKLVVDLAGLNVGDTVTISAIKLPEGAK--PTIDRDFVVAN 184
Query: 182 AIIPVNTLESDN 193
P +DN
Sbjct: 185 ISAPSGLKSADN 196
>gi|148260671|ref|YP_001234798.1| 50S ribosomal protein L25/general stress protein Ctc [Acidiphilium
cryptum JF-5]
gi|326403865|ref|YP_004283947.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301]
gi|338980520|ref|ZP_08631790.1| 50S ribosomal protein L25 [Acidiphilium sp. PM]
gi|166223656|sp|A5FZ47.1|RL25_ACICJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146402352|gb|ABQ30879.1| LSU ribosomal protein L25P [Acidiphilium cryptum JF-5]
gi|325050727|dbj|BAJ81065.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301]
gi|338208553|gb|EGO96402.1| 50S ribosomal protein L25 [Acidiphilium sp. PM]
Length = 217
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A +R + G +R R+ GKVP +IYG ++P I+++ ++ +K+ + S + +
Sbjct: 7 IAAEDRARAGKGVARATRRAGKVPAVIYGAKQEPTLIALDPRIVLREMKRGGWRSRLYEI 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E L+R+ QLH H DFQR+ + + V V ++F+N IS +K +
Sbjct: 67 ETASGKARALMRDIQLHPVTDQPEHVDFQRLAAGEPVRVAVNVNFLNELISVGMK-RGGV 125
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
++ V + + C P ++P E +L +++N +I SD+K G + T+ D IAT
Sbjct: 126 LNVVRHAVEVLCDPDHIPDHFEADLGPLDINDNIRWSDLK-GTGEAKPTITDRDFVIATI 184
Query: 183 IIP 185
P
Sbjct: 185 APP 187
>gi|430741804|ref|YP_007200933.1| 50S ribosomal protein L25 [Singulisphaera acidiphila DSM 18658]
gi|430013524|gb|AGA25238.1| ribosomal protein L25, Ctc-form [Singulisphaera acidiphila DSM
18658]
Length = 216
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 9 KKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKV 68
K G+ SR LR G++P IIYG +DP+ IS+ ++ +KK T + L + G
Sbjct: 18 KGTGSRVSRRLRANGQIPAIIYGHKQDPLPISLARASVWDMIKKSTH---LAELSVNGAT 74
Query: 69 ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS 128
E V++R+ Q K ++H DF RV+ ++ I +V L + SP V ++ +
Sbjct: 75 ETVIVRDIQWDHLGKEIIHLDFARVNADESIETEVKLELRGT--SPGVS-EGGVLEQPVH 131
Query: 129 DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ ++C +P I +++ + + SIH+ D+ LP GV V
Sbjct: 132 AVEVTCRANAIPDSIRVDVSNLHLGQSIHVRDLILPEGVKV 172
>gi|453328665|dbj|GAC89093.1| 50S ribosomal protein L25 [Gluconobacter thailandicus NBRC 3255]
Length = 215
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELV-LLRNFQL 78
R+ G VP +IYGG ++P I+++ +I L + + S + NL G + L+R+ QL
Sbjct: 21 RRAGLVPAVIYGGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGAEPVAALIRDVQL 80
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISD-LYISCLPK 137
H +H DFQRV K+HV+V + F E +P +K + NV+ + ++ P
Sbjct: 81 HPVSDAPIHVDFQRVSAGTKVHVEVSIVFTGEEKAPGIKRGGVL--NVVRHYVDVAADPA 138
Query: 138 NLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
N+P+ +L ++++ S+ +D+K GV++ D IA+ P
Sbjct: 139 NIPEHFTADLSALDIHDSVRWADLKGTEGVALTGGQATDIVIASVAPP 186
>gi|110681037|ref|YP_684044.1| 50S ribosomal protein L25 [Roseobacter denitrificans OCh 114]
gi|122972523|sp|Q161I5.1|RL25_ROSDO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109457153|gb|ABG33358.1| ribosomal protein L25, Ctc-form [Roseobacter denitrificans OCh 114]
Length = 212
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A ER G +R R+ G VPGI++GG+ DP+ I++ N++ L++ F S++ N+
Sbjct: 8 LVAQERTGTGKGAARQARRDGMVPGIVFGGDVDPLPINIPFNVLIKKLREGRFKSTLFNM 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G ++ V+ R+ Q H K L H DF R+ KI++ + + +++P +K
Sbjct: 68 KVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIAVEVEGEDVAPGLK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+++ + ++ + ++P + I++ +ME+ +I +S + LP G + + D IA
Sbjct: 127 VLTLIRPEVELIVTAGDIPDHVTIDISEMEIGDNITISSVNLPEGAK--PTIDRDFVIAQ 184
Query: 182 AIIPVNTLES 191
P + S
Sbjct: 185 LSAPAGLVSS 194
>gi|406830798|ref|ZP_11090392.1| 50S ribosomal protein L25/general stress protein Ctc [Schlesneria
paludicola DSM 18645]
Length = 219
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 90/165 (54%), Gaps = 6/165 (3%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K++ R + G++ R LR G+VPG IYG N P + + + + L+ + +++
Sbjct: 6 KLVVKLRAENGSAACRRLRWSGQVPGNIYGHNAPPTAVVIAADALMPVLQS---GAKVVD 62
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+E+ GKV+ ++R Q + +++ H D RVD +++++ VPL + +P V L
Sbjct: 63 VELDGKVDKAVVREIQWDTFGRMIQHFDLLRVDPNERVNIVVPLELKGT--APGVLLGG- 119
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
++ + + I CL +P I++ + +E+ +IH+SD+ LP G
Sbjct: 120 VLEQTMHSITIDCLAYQIPDTIQVRIGSLELGKAIHVSDLVLPEG 164
>gi|308274567|emb|CBX31166.1| 50S ribosomal protein L25 [uncultured Desulfobacterium sp.]
Length = 211
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G +R LR++G++P +IYG KD +S+ + LKK +ILN+EI
Sbjct: 6 RESAGNGPARVLRRMGEIPAVIYGPGKDTNLLSITIKDLEDILKKAKVGQAILNIEIQNG 65
Query: 68 V---ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
+++ Q+H + +LH DF + ++KI VK+P+ + I+ + ++
Sbjct: 66 ALHTRTAMIKELQIHPVSRELLHVDFYEISMDRKIKVKIPV--VTKGIAKGIDFGG-MLQ 122
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ ++ I CLP +P+ IEI++ + + SIH++D+ LP+GV +
Sbjct: 123 IIKREIEILCLPVGIPESIEIDITDLNIGDSIHVNDLVLPQGVEI 167
>gi|414341970|ref|YP_006983491.1| 50S ribosomal protein L25 [Gluconobacter oxydans H24]
gi|411027305|gb|AFW00560.1| 50S ribosomal protein L25 [Gluconobacter oxydans H24]
Length = 215
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELV-LLRNFQL 78
R+ G VP +IYGG ++P I+++ +I L + + S + NL G + L+R+ QL
Sbjct: 21 RRAGLVPAVIYGGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGAEPVAALIRDVQL 80
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISD-LYISCLPK 137
H +H DFQRV K+HV+V + F E +P +K + NV+ + ++ P
Sbjct: 81 HPVTDAPIHVDFQRVSAGTKVHVEVSIVFTGEEKAPGIKRGGVL--NVVRHYVDVAADPA 138
Query: 138 NLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
N+P+ +L ++++ S+ +D+K GV++ D IA+ P
Sbjct: 139 NIPEHFTADLSALDIHDSVRWADLKGTEGVALTGGQATDIVIASVAPP 186
>gi|422604212|ref|ZP_16676229.1| 50S ribosomal protein L25/general stress protein Ctc, partial
[Pseudomonas syringae pv. mori str. 301020]
gi|330887871|gb|EGH20532.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. mori str. 301020]
Length = 143
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Query: 57 SSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAV 116
S I+ L + G+ + V+++ Q H K V+HADF RV +K+ VP+HF+N E +P
Sbjct: 1 SHIIELNVGGQKQNVIIKALQRHPAKGHVMHADFVRVIAGQKLTAIVPIHFLNEE-APVK 59
Query: 117 KLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HST 173
K IS+ ++L ++CLPK+LP+FIE++L +EV ++HLS++K P+GV + H T
Sbjct: 60 KGGE--ISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLSELKAPKGVEFVALAHGT 117
Query: 174 E 174
+
Sbjct: 118 D 118
>gi|77464403|ref|YP_353907.1| 50S ribosomal protein L25 [Rhodobacter sphaeroides 2.4.1]
gi|126463245|ref|YP_001044359.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides ATCC 17029]
gi|221640293|ref|YP_002526555.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides KD131]
gi|332559294|ref|ZP_08413616.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides WS8N]
gi|429206040|ref|ZP_19197308.1| LSU ribosomal protein L25p [Rhodobacter sp. AKP1]
gi|109893390|sp|Q3IZM8.1|RL25_RHOS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223710|sp|A3PMM1.1|RL25_RHOS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801059|sp|B9KMG3.1|RL25_RHOSK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77388821|gb|ABA80006.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides 2.4.1]
gi|126104909|gb|ABN77587.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17029]
gi|221161074|gb|ACM02054.1| 50S ribosomal protein L25 [Rhodobacter sphaeroides KD131]
gi|332277006|gb|EGJ22321.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides WS8N]
gi|428190761|gb|EKX59305.1| LSU ribosomal protein L25p [Rhodobacter sp. AKP1]
Length = 203
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 100/193 (51%), Gaps = 4/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G VPGI+YGG ++P+ I++ +N + + LKK F ++ NL++ G+
Sbjct: 13 RTGTGKGAARQARREGYVPGIVYGGGQEPLSINVPYNDLLNRLKKGRFLQTLFNLKVEGQ 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V+ R Q K L H DF R+ ++++ + + F N + +P +K ++ V
Sbjct: 73 EDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRVNLFIHVTFENHDKAPGLKRGGT-LTVV 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++ + ++P + ++L ++ IH++DIKLP G + + + IA P
Sbjct: 132 RPEVELEVTAGDIPDHLTVDLTDRQIGDVIHINDIKLPEG--AVPTINRNFVIANISAPS 189
Query: 187 NTLESDNNSSIEK 199
SDN E+
Sbjct: 190 GLRSSDNEEEAEE 202
>gi|114707023|ref|ZP_01439922.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506]
gi|114537573|gb|EAU40698.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506]
Length = 232
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++ A +R+K G +R LR+ +P +IYG NKDP+ I++ + + AL F +++
Sbjct: 5 FEVKAEKREKVGKGAARALRRNAMIPAVIYGDNKDPLPIALPYKETFLALHAGGFMTNLA 64
Query: 61 NLEIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ + GK ++ VL R++QL + + H DF RV + ++ V++P+HF N E SP ++
Sbjct: 65 TITV-GKEKIKVLPRDYQLDPVRDFLEHVDFLRVGEKTRVTVEIPVHFENEEESPGLE-R 122
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+++ V + + C ++P++ I+L E+ ++ S I LP V
Sbjct: 123 GGVLNVVRHAVEVECSANSIPEYFTIDLTGTEIGDTLASSSITLPDDV 170
>gi|365859122|ref|ZP_09399000.1| ribosomal protein L25, Ctc-form [Acetobacteraceae bacterium
AT-5844]
gi|363713021|gb|EHL96680.1| ribosomal protein L25, Ctc-form [Acetobacteraceae bacterium
AT-5844]
Length = 215
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A R+ G +R R+ G VP +IYG ++ I+++ + + K + S +
Sbjct: 5 IRIEAEARELAGKGAARATRRQGLVPAVIYGAKEEATLIALDPRDVMKEMHKGGWQSHLY 64
Query: 61 NLEIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ I G + L+R+ Q H K LH DFQR+ + I VKVPL F+N +P VK
Sbjct: 65 EVAIKGGATVRTLMRDVQFHPLKDTPLHVDFQRLAPGQLIRVKVPLVFLNEATNPGVK-E 123
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHS 172
+I+ V +L + P +P+ EI+L + S H D+K G + +
Sbjct: 124 GGVINAVYRELEVLSDPDQVPEHFEIDLADFGIGHSFHWDDVKDKAGAKPVQA 176
>gi|392412074|ref|YP_006448681.1| ribosomal protein L25, Ctc-form [Desulfomonile tiedjei DSM 6799]
gi|390625210|gb|AFM26417.1| ribosomal protein L25, Ctc-form [Desulfomonile tiedjei DSM 6799]
Length = 201
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 92/167 (55%), Gaps = 8/167 (4%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G +R LR +GK+P +YG +P+ +S+N + + + + +S+ +L+I G
Sbjct: 11 RTETGKGPARRLRAVGKIPATLYGRKSEPISLSLNEHE-FRKIYERAGSTSLFDLQIKGD 69
Query: 68 VEL----VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
++ L++ Q+ A+ +LH DFQ + ++ I + +P+ F I + I
Sbjct: 70 GKVFTRSALIKERQIRAFDGTILHLDFQEILMDEAIEMAIPVEFEGKPIGLEKGGDFLIT 129
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ ++ +SCLP N+P+ I +++ +++ SIH+ +I LP GVS +
Sbjct: 130 TR---EIRVSCLPGNIPEAIVVDVSGLDLGHSIHVGEITLPEGVSAV 173
>gi|452077539|gb|AGF93495.1| ribosomal protein L25 [uncultured organism]
Length = 230
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 103/180 (57%), Gaps = 11/180 (6%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G SR LR+ GK+PGI+YG + D + ++ +Y L K ++I++L+I +
Sbjct: 11 REGTGKGVSRRLRRNGKIPGIVYGKSIDSTPLIVDPTELYDKLNK----NAIIDLKITDE 66
Query: 68 --VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
E+V+++++Q K ++H DFQ++ +++I V VP++ + I ++
Sbjct: 67 DEEEVVMIKDYQRDVIKDNIIHVDFQQIFMDEEISVTVPINIVGDAIGVQ---EGGVLQE 123
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
++ ++ I LP+++P+ +++++ ++EV S+ +SDI+ P + + S D I T + P
Sbjct: 124 LMREVEIEALPEDIPRELDLDISELEVGDSLQVSDIEAPEDIKITSSF--DNVIVTVVPP 181
>gi|357399723|ref|YP_004911648.1| 50S ribosomal protein L25 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386355762|ref|YP_006054008.1| 50S ribosomal protein L25 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337766132|emb|CCB74843.1| 50S ribosomal protein L25 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365806270|gb|AEW94486.1| 50S ribosomal protein L25 [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 195
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 99/179 (55%), Gaps = 10/179 (5%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+KI A R G +R +R+ GKVPG+IYG +PV +S+ + + ALK ++
Sbjct: 4 VKIAAEARADFGKGAARRIRREGKVPGVIYGHGAEPVHVSLPGHELMLALKNSNV---LI 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L++ GK ELV+ + Q K + H D +V +K+ V+VP+H + +++P
Sbjct: 61 SLDVAGKTELVIPKAVQKDPIKGFLEHVDLLQVKRGEKVTVEVPVH-VEGDLAP----GG 115
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+I ++++ L I +LP+ + ++++ + ++H DI LP+G ++ + EED +
Sbjct: 116 NLIEHILNALPIEAEATHLPESVTVSVQGLSAGDAVHAKDIALPKGSTL--AVEEDAVV 172
>gi|300814301|ref|ZP_07094573.1| ribosomal protein L25, Ctc-form [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511568|gb|EFK38796.1| ribosomal protein L25, Ctc-form [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 211
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
RK+ G + LR G VPG+IYG +++P+ +S + N+I L +E S I+ +EI G+
Sbjct: 9 RKEHGKNQVDKLRAEGIVPGVIYGKDREPLNVSGHENVILK-LFQEVGTSVIIEVEIDGQ 67
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL + Q+H +K +LH D +D I V VP+ I + +K+ + VI
Sbjct: 68 KTSVLFKEVQMHPFKNNMLHFDLYEIDMNHPITVVVPVVLIGRD---EIKVQPSNLIQVI 124
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+++ +SCLPK LP ++ + M++ +I ++D+ + + ++ + + D +AT P
Sbjct: 125 NEVEVSCLPKYLPSTADVEVTDMQIGDTITVADLDISKDENIEVALDADEVVATLSAP 182
>gi|302390885|ref|YP_003826705.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium
arabaticum DSM 5501]
gi|302202962|gb|ADL11640.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium
arabaticum DSM 5501]
Length = 224
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 98/178 (55%), Gaps = 9/178 (5%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT +R LR+ G VPG++YG N++P+ + ++ L T ++I++L++ G+
Sbjct: 11 RDETGTGSARRLREQGLVPGVVYGRNQEPINLKLDAT----ELADVTGGNAIIDLQVDGE 66
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V++++ Q LH DF ++ ++ I V+VP+ ++ VK ++ +
Sbjct: 67 EKTVMVKDVQKDVITDEYLHVDFHQIALDEPIVVEVPISL--EGVAEGVK-EGGVLQKTL 123
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+ + CLP +P +++N+ ++EV S+H+ D++ G+ + +T D + T + P
Sbjct: 124 RKVEVQCLPTEIPSDLKLNISELEVGESLHVGDLEAGEGIEL--TTSGDEVVVTVVAP 179
>gi|337287648|ref|YP_004627120.1| 50S ribosomal protein L25 [Thermodesulfobacterium sp. OPB45]
gi|334901386|gb|AEH22192.1| 50S ribosomal protein L25 [Thermodesulfobacterium geofontis OPF15]
Length = 201
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 99/181 (54%), Gaps = 10/181 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+K G + LRK G +P I+YG + P+ I++ + + AL K + + NL++
Sbjct: 8 AIKREKTGKEICKKLRKQGLIPAIVYGPHFQPLPIAVKSSELESALIKHKGETILFNLQL 67
Query: 65 Y----GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
K++ +L++ Q H ++H DF + ++ I + VPL FI + +
Sbjct: 68 ANGEPSKIQ-AILKDHQTHPVTDKIIHIDFLAIHEKETITIDVPLEFIGKPVGIS---KG 123
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I+ ++ +L I CLP +P I +++ +++ +H+ DIK+P+G+ V+ + EE T+A
Sbjct: 124 GILEILLHELTIECLPSEVPDKITVDISNLDIGDVLHVKDIKVPKGIKVVDNPEE--TVA 181
Query: 181 T 181
T
Sbjct: 182 T 182
>gi|119386784|ref|YP_917839.1| 50S ribosomal protein L25 [Paracoccus denitrificans PD1222]
gi|166223701|sp|A1B9E9.1|RL25_PARDP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|119377379|gb|ABL72143.1| LSU ribosomal protein L25P [Paracoccus denitrificans PD1222]
Length = 208
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 101/192 (52%), Gaps = 4/192 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A R G +R R+ GKVPGI+YG K+P I + N + L+ F S++ NL
Sbjct: 8 LVAEARAGTGKGAARQARREGKVPGIVYGDGKEPQPIQIEFNSLLTKLRAGRFMSTLWNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G+ ++ V+ R Q K L H DF R+ ++++ + ++F N + +P +K
Sbjct: 68 KVEGQDDVRVVCRGVQRDVVKDLPTHIDFMRLHRNTRVNLFIHVNFENQDEAPGLKRGGT 127
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
++ V ++ + ++P+ I ++L ++ +IH++D+ LP+GV + + + IA
Sbjct: 128 LVV-VRPEVELVVTASDIPEQITVDLTGKQIGDTIHINDVVLPKGVK--PTIDRNFVIAN 184
Query: 182 AIIPVNTLESDN 193
P +DN
Sbjct: 185 IAAPSGLRSADN 196
>gi|406923716|gb|EKD60745.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 196
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R G +R R+ G VPGI+YG N P I + +N + LK F SS+ NL++
Sbjct: 10 AEARTGTGKGAARQSRRDGFVPGIVYGDNTAPQPIKIPYNALLKRLKAGRFLSSLFNLKV 69
Query: 65 YGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G+ ++ V+ R Q K L H D R+ E +I++ + + FIN E SP +K +
Sbjct: 70 EGQPDVHVICRAVQRDVVKDLPTHIDLMRLHDENRINLFIHVTFINHEASPGLK-KGGTL 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+ V +D+ ++ L ++P + ++L ++ IH++DI LP G + + + IA
Sbjct: 129 TVVRNDVELNVLAGDIPDHVTVDLTGTKIGDVIHINDIVLPEGAK--PTIDRNFVIANVA 186
Query: 184 IPVNTLES 191
P +E+
Sbjct: 187 APAGYVET 194
>gi|428209827|ref|YP_007094180.1| 50S ribosomal protein L25 [Chroococcidiopsis thermalis PCC 7203]
gi|428011748|gb|AFY90311.1| LSU ribosomal protein L25P [Chroococcidiopsis thermalis PCC 7203]
Length = 212
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSI 59
M++ +K+ S LR+ G +P +YG + + + MN LKK + +++I
Sbjct: 1 MELTVECQKRPEGSQPNALRRGGMIPANLYGHKGTEAISLVMNAKTAETMLKKASVNNTI 60
Query: 60 LNLEIY-----GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
++L I GK L+R Q H YK + H F V + + V+VPLHF+ +
Sbjct: 61 IDLNITDLPWRGKT---LVREVQSHPYKGNIYHISFFAVAAQDSVDVEVPLHFVGDAV-- 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
VK S I+ + + L I C P ++P+ IEIN+ + V S+++ ++ LP GV+V+ TE
Sbjct: 116 GVKQESGIVDTLATSLQIRCNPDSIPEAIEINISNLHVGDSLYVRELVLPSGVTVLGDTE 175
Query: 175 EDPTIATAIIPVNT 188
+ + T + P T
Sbjct: 176 Q--AVVTVLSPQKT 187
>gi|359408729|ref|ZP_09201197.1| ribosomal protein L25, Ctc-form [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675482|gb|EHI47835.1| ribosomal protein L25, Ctc-form [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 211
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 21/195 (10%)
Query: 13 TSFSRNLR-KIGK-----------VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
TS LR ++GK +P +IYG + P+ I M ++ + + +L
Sbjct: 5 TSIDATLRSRVGKGSARAARRAGRIPAVIYGDKQAPLSIEMEERVVRRVIHEPGIFGRLL 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + G VL R+ Q+H LH D RV + V VP+ FIN E SP +K+
Sbjct: 65 DINVEGNTTTVLTRDIQMHPVTDEPLHLDMLRVGKSSTVAVGVPVEFINHEKSPGLKIGG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ ++C N+P+ I ++L+ +++ +IH+S I LP GV +PTI
Sbjct: 125 -VLNIVRHEVEMNCPAGNIPEKITVDLDGVKIGETIHISAIPLPEGV--------EPTIT 175
Query: 181 TAIIPVNTLESDNNS 195
V TL+S
Sbjct: 176 DRDFTVATLQSPGGG 190
>gi|254510687|ref|ZP_05122754.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11]
gi|221534398|gb|EEE37386.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11]
Length = 189
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQLHAYKK 83
VPGI++GG+K+P+ I + N ++ LK F S++ NL++ G ++ V+ R+ Q K
Sbjct: 2 VPGIVFGGDKEPLPIQIPFNELFKRLKAGRFKSTLWNLKVDGHEDVRVICRDVQRDVVKD 61
Query: 84 LVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFI 143
L H D R+ KI + +P+ FIN E +P +K +++ V ++ + C ++P+ I
Sbjct: 62 LPTHLDLMRLRRTTKIALFIPVEFINEEAAPGIK-KGGVLTVVRPEVELLCTAGDIPEKI 120
Query: 144 EINLEKMEVNTSIHLSDIKLPRG 166
++L +E+N + +S + LP G
Sbjct: 121 TVDLAGLEINDVVTISSVDLPDG 143
>gi|341615434|ref|ZP_08702303.1| 50S ribosomal protein L25/general stress protein Ctc
[Citromicrobium sp. JLT1363]
Length = 226
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G SR LR+ G+VP +IYGG ++P+ I + + L F +SI+ +E+
Sbjct: 9 AETRDRAGKGASRALRREGRVPAVIYGGKEEPITIHVEERELIRQLDMGHFMNSIIEIEV 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK L ++ LH H DF R+ K+ V VP+ F++ E SP +K +++
Sbjct: 69 GGKKVRTLPKDVALHPVTDRPEHVDFLRLAKGAKVDVSVPVVFVDEEESPGLK-KGGVLN 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
V +L + C +P I I+++ EV SIH+S++ LP G S T+ D TIAT +
Sbjct: 128 VVRHELELVCEADKIPNEIVISVKGKEVGDSIHISEVDLPEG-STSAITDRDFTIATLVA 186
Query: 185 P 185
P
Sbjct: 187 P 187
>gi|330993035|ref|ZP_08316973.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1]
gi|329759805|gb|EGG76311.1| 50S ribosomal protein L25 [Gluconacetobacter sp. SXCC-1]
Length = 205
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIY-GKVELVLLRNFQL 78
R+ G VPG+IYG ++PV I+++ ++Y L K + S I ++ + G LLR QL
Sbjct: 24 RRAGLVPGVIYGAGQEPVLIALDPRIVYRELHKSGWRSRIYDISVEKGASVHALLREVQL 83
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN 138
H +H D+QR+ K+HV+V + F E+SP VK +++ V + + P N
Sbjct: 84 HPVSDAPIHVDYQRLAAGHKVHVEVEIRFEGEEVSPGVK-RGGVMNIVRHTVDVVVDPAN 142
Query: 139 LPKFIEINLEKMEVNTSIHLSDIK 162
+P+F +L K++ + ++ D+K
Sbjct: 143 IPEFFTADLSKLDFHDNVRWEDLK 166
>gi|301060863|ref|ZP_07201672.1| ribosomal protein L25, Ctc-form [delta proteobacterium NaphS2]
gi|300445037|gb|EFK08993.1| ribosomal protein L25, Ctc-form [delta proteobacterium NaphS2]
Length = 229
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 101/188 (53%), Gaps = 10/188 (5%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G +R LR+ ++P I YG DP+ + + ++ + K ++IL
Sbjct: 4 LALAAHIRTETGKGAARRLRQNNQIPAIFYGPGVDPIMLRIEYSRLLELEKAGKGENAIL 63
Query: 61 NLEIYGK----VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAV 116
+L+I+ ++ V+++ + K +HADF + +++I + +P+H +N+ I V
Sbjct: 64 DLKIHTDQGETIKKVMVKELTVDPLKNTFVHADFYEISNDREITLPIPVHLLNTPI--GV 121
Query: 117 KLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
I+ + ++ I+C P L +F+EI++ + V ++ + D++LP G+ ++ E+
Sbjct: 122 AEEGGILQQIRREVTITCFPDKLIEFLEIDIADLNVGDTVRIGDLELPEGIQIM----EE 177
Query: 177 PTIATAII 184
P + A++
Sbjct: 178 PNLTVAVV 185
>gi|405354022|ref|ZP_11023431.1| LSU ribosomal protein L25p [Chondromyces apiculatus DSM 436]
gi|397092713|gb|EJJ23462.1| LSU ribosomal protein L25p [Myxococcus sp. (contaminant ex DSM
436)]
Length = 220
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGN-KDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R+ G +R LR G +P ++YG + + PV IS++ + A+ ++++ ++
Sbjct: 10 AQPREGSGKGVARRLRAQGLIPAVVYGKHLEKPVHISVDPKAVRQAINTPHKFNTLIKIK 69
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G VLL+++Q+ + +LHADF V ++++ V VPL A + ++
Sbjct: 70 VAGGDREVLLKDYQMEPVTRAILHADFLDVRADEQVKVNVPLVLTGRAQGVA---DGGLL 126
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ +L + LP +P+ IE+++ M++ +H++D+KLP GVSV
Sbjct: 127 TQARRELEVWSLPAAIPERIEVDVTPMKITEVLHINDVKLPAGVSV 172
>gi|339502103|ref|YP_004689523.1| 50S ribosomal protein L25 [Roseobacter litoralis Och 149]
gi|338756096|gb|AEI92560.1| 50S ribosomal protein L25 [Roseobacter litoralis Och 149]
Length = 212
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A ER G +R R+ G VPGI++GG+ DP+ I++ N++ L++ F S++ N+
Sbjct: 8 LVAQERTGTGKGAARQARRDGMVPGIVFGGDVDPLPINIPFNVLIKKLREGRFKSTLFNM 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G ++ V+ R+ Q H K L H DF R+ +I++ + + E +P +K
Sbjct: 68 KVEGHDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTQINLFIAVEVDGEEEAPGLK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+++ + ++ + ++P I I++ +ME+ +I +S + LP G + + D IA
Sbjct: 127 VLTLIRPEVELIVTAGDIPDHITIDISEMEIGDNITISSVNLPEGAK--PTIDRDFVIAQ 184
Query: 182 AIIPVNTLES 191
P + S
Sbjct: 185 LSAPAGLVSS 194
>gi|167644635|ref|YP_001682298.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter
sp. K31]
gi|189042349|sp|B0T899.1|RL25_CAUSK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|167347065|gb|ABZ69800.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
sp. K31]
Length = 199
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 7/193 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR R+ GKVPG++YGG PV I++ N AL ++ L+ +
Sbjct: 11 RDRAGTGGSRETRRQGKVPGVLYGGPLAPVNIAVKGNEFRKALHTGKLLGHLVTLQHGDE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC--IISN 125
+ V+ + Q H LH D RVD + I +++P+HF N +IS +K II +
Sbjct: 71 KQSVIAKAVQFHPVTDEPLHFDLYRVDEHQLIKIEIPVHFKNHDISVGLKKGGTLEIIRH 130
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+ ++C +P+ + I+L ++ +I +S+IKLP GV + E D IA
Sbjct: 131 TVE---LACPADKIPEELVIDLASHDIGDTIRISEIKLPEGVRP--AMERDFVIANLKAS 185
Query: 186 VNTLESDNNSSIE 198
+ ++ +++ E
Sbjct: 186 AASQSTEGDTTAE 198
>gi|407472631|ref|YP_006787031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
acidurici 9a]
gi|407049139|gb|AFS77184.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
acidurici 9a]
Length = 208
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ KG+ S LR G +P +IYG N I++N I AL+K ++++ +EI GK
Sbjct: 8 REDKGSRKSGRLRTAGYIPAVIYGSNFSNHVIALNDKEIREALRK-LGENALVKVEIDGK 66
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+E ++++ Q +LH D Q+V + ++I V+VP+ + E+ K N ++ +
Sbjct: 67 LETAMIKDIQRVPVGNKILHIDLQQVSSTERIQVQVPIILVGREL----KANEGVLQQQL 122
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
L I CL ++P+ I I++ + V S +SDIK+ ++++ EE
Sbjct: 123 DGLDIDCLAVDIPRNITIDVSHLGVGDSFTVSDIKVEGDFTIVNDGEE 170
>gi|307944188|ref|ZP_07659529.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4]
gi|307772534|gb|EFO31754.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4]
Length = 207
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNK--DPVKISMNHNMIYHALKKETFHSSILNL 62
A R + G +R LR+ G +P +IYG K P+ I + + L K F + I +
Sbjct: 9 ASARDRVGKGAARALRREGLLPAVIYGDKKPAQPITIPVKETTL--TLHKGGFLTHIGTI 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
+I G+ V+ +++QLH + VLH DF RV + V +P+ FIN E P +K +
Sbjct: 67 DIDGEKHQVIAKDYQLHPVRDDVLHVDFLRVSKNTTLTVDIPVTFINEETCPGLKKGGML 126
Query: 123 ISNVISDLYISCLPKN-LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
NV+ +P N +P+ + +L K+++ ++H+S LP G T+ D T+AT
Sbjct: 127 --NVVRHTVELQVPANAIPETLVFDLAKVDIGDTLHISATDLPEGAQPT-ITDRDFTVAT 183
Query: 182 AIIPVNTLESDN 193
P ++ D+
Sbjct: 184 LAAPGGGVQEDD 195
>gi|146276403|ref|YP_001166562.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides ATCC 17025]
gi|166223711|sp|A4WPE3.1|RL25_RHOS5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|145554644|gb|ABP69257.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17025]
Length = 203
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G VPGI+YGG ++P+ I++ +N + + LKK F ++ NL++ G+
Sbjct: 13 RTGTGKGAARQARREGYVPGIVYGGGQEPLSINVKYNDLLNRLKKGRFLQTLFNLKVEGQ 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V+ R Q K L H DF R+ +I++ + + F N + +P +K ++ V
Sbjct: 73 EDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRINLFIHVTFENHDQAPGLKRGGT-LTVV 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++ + ++P I ++L ++ IH+ DI LP G + + + IA P
Sbjct: 132 RPEVELEVTAGDIPDHITVDLTGKQIGDVIHIQDIALPEG--AVPTINRNFVIANISAPS 189
Query: 187 NTLESDN 193
SDN
Sbjct: 190 GLRSSDN 196
>gi|206890546|ref|YP_002249253.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|226736374|sp|B5YG55.1|RL25_THEYD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|206742484|gb|ACI21541.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 214
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIY-GGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R++ G +R LR G +P +IY G PV+I +Y + T + L++ G
Sbjct: 11 RERTGKGIARQLRSKGIIPCVIYKNGQSTPVQIPTKE--LYTFMNIATREKLFVTLKLDG 68
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ + +L+++Q+ +LH DF V +KI V +P+ I I VK + ++ +
Sbjct: 69 QEKQAILQDYQVDPVTGKLLHVDFMEVSATEKIRVTIPVVLIGEPI--GVKQDKGVLQHG 126
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
IS++ I +P+ +P IE+++ +EV ++H+SDIK G+ VI + EE
Sbjct: 127 ISEIEIEAIPEKIPGHIEVDVSHLEVGDAVHVSDIKFEEGIKVISNPEE 175
>gi|372281610|ref|ZP_09517646.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanicola
sp. S124]
Length = 179
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQLHAYKK 83
VPG++YGG+ DP+ I + N + LK F +++ NL++ G ++ V+ R Q K
Sbjct: 2 VPGVVYGGDADPIAIEIGFNDLLKRLKAGRFLATLFNLKVEGHEDVRVICRGVQRDVVKD 61
Query: 84 LVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFI 143
L H DF R+ ++++ +P+ FIN +P +K +++ V +D+ +S + ++P I
Sbjct: 62 LPTHVDFMRLRRTTRVNLHIPVEFINHAAAPGLK-KGGVLTVVRADVDLSVIAGDIPDHI 120
Query: 144 EINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
++L ++ +I +S + LP GV + E D IA P
Sbjct: 121 TVDLTGKQIGDTITISQVTLPEGVKPV--IERDFVIANITAP 160
>gi|338536292|ref|YP_004669626.1| 50S ribosomal protein L25/general stress protein Ctc [Myxococcus
fulvus HW-1]
gi|337262388|gb|AEI68548.1| 50S ribosomal protein L25/general stress protein Ctc [Myxococcus
fulvus HW-1]
Length = 218
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGN-KDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R+ G +R LR G +P ++YG + + PV +S++ + A+ ++++N++
Sbjct: 10 AKPREGSGKGVARRLRAQGLIPAVVYGKHLEKPVHLSVDPKAVRQAINTPHKFNTLINIK 69
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G VLL+++Q+ + +LHADF V +++ V VPL A + ++
Sbjct: 70 VEGGDRQVLLKDYQMEPVTRAILHADFLDVRPNEQVKVNVPLVLTGRAQGVA---DGGLL 126
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ ++ + LP ++P+ IE+++ M++ +H++D+KLP GVSV
Sbjct: 127 TQARREIEVWSLPASIPERIEVDVTPMKITEVLHINDVKLPEGVSV 172
>gi|209523976|ref|ZP_03272528.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira
maxima CS-328]
gi|376003832|ref|ZP_09781633.1| 50S ribosomal protein L25 (General stress protein CTC) [Arthrospira
sp. PCC 8005]
gi|423063705|ref|ZP_17052495.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira
platensis C1]
gi|209495648|gb|EDZ95951.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira
maxima CS-328]
gi|375327774|emb|CCE17386.1| 50S ribosomal protein L25 (General stress protein CTC) [Arthrospira
sp. PCC 8005]
gi|406715137|gb|EKD10295.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrospira
platensis C1]
Length = 201
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSI 59
M+I +K+ S R LR+ G +P ++YG + +++++ + +KK + ++
Sbjct: 1 MEITVQCQKRPSGSKPRALRREGLIPAVLYGHKGAESEELTIDAKSAENLMKKGAVNHTL 60
Query: 60 LNLEI-----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
+ L I GK LLR Q H +K H F V T + + V +PL+FI I
Sbjct: 61 IQLNIPDLSWAGKA---LLREVQTHPWKGFPYHLSFFSVGTLESVEVTIPLNFIGEPI-- 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
VK + ++ VI+++ ++C P N+P+ I++ + +EV ++H+S+++LP GV VI E
Sbjct: 116 GVKNSGGMLDLVITEVQVNCKPGNIPEAIDVEVSSLEVGDALHISELQLPEGVEVI--AE 173
Query: 175 EDPTIATAIIPVNTLESDNNSSIE 198
D +A+ + D E
Sbjct: 174 ADQVVASILYRGGGQAEDGEGETE 197
>gi|168704119|ref|ZP_02736396.1| 50S ribosomal protein L25/general stress protein Ctc [Gemmata
obscuriglobus UQM 2246]
Length = 216
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G+ + LRK G VP I+YG + V +++N + A++ + H+ +L+L+I GK
Sbjct: 12 RAETGSRAAARLRKQGLVPAIVYGHKQANVSLAVNAKELDQAIRVQ--HARVLDLDIEGK 69
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
E VL+R Q K ++H DF+R D + + V VP+ N+ + ++
Sbjct: 70 TETVLIRELQWDYLGKEMIHVDFERKDRAELVRVSVPVALKNAPKA----TGGGVLDQPF 125
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
L++ C +P+ I I++ + + IH+ D+ LP GV V+ + E
Sbjct: 126 HALHVECPLGAIPESIAIDITNLTLGHPIHIRDLALPPGVKVLDAPE 172
>gi|115378654|ref|ZP_01465804.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1]
gi|310823076|ref|YP_003955434.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1]
gi|115364320|gb|EAU63405.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1]
gi|309396148|gb|ADO73607.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1]
Length = 232
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGN-KDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R+ G +R LR G VP ++YG + + PV +++N + A+ ++++ L+
Sbjct: 10 AKAREGSGKGAARKLRAQGLVPAVVYGKHLEKPVHVAVNPKAVKQAINTPHKFNTLIQLK 69
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ VLL+++Q + +LH DF V +++ V VPL + + A + ++
Sbjct: 70 LDSATHQVLLKDYQTDPLSREILHVDFIDVRDNEQVKVNVPLVLVGKAVGTA---DGGLL 126
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ +L + LP+ +P+ IE+++ +++ ++H++DIKLP+GVSV
Sbjct: 127 TQARRELEVWALPQAIPEKIEVDVTPLKIAQALHINDIKLPQGVSV 172
>gi|330813694|ref|YP_004357933.1| 50S ribosomal protein L25 [Candidatus Pelagibacter sp. IMCC9063]
gi|327486789|gb|AEA81194.1| LSU ribosomal protein L25p [Candidatus Pelagibacter sp. IMCC9063]
Length = 237
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 96/178 (53%), Gaps = 2/178 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ K S + LR G VPG++YG + K+++ N + LK F S+++++++ GK
Sbjct: 13 RETKTKSDIKKLRIDGFVPGVLYGDVETNFKLAVKKNALEKLLKIGNFMSTVIDIKVAGK 72
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL R+ + + +H DFQ++ K+ V +P+ FIN I P +K+ +++ V
Sbjct: 73 EYKVLPRDIEFNKLTNQPIHVDFQKISAGTKVVVWIPVKFINESICPGLKMGG-VLNIVR 131
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+ ++C +P + +L + ++N SIH+S IKLP V + D TIAT P
Sbjct: 132 RKVELNCPADQIPAELVCDLGEKQLNESIHISSIKLPENVKP-TILDRDFTIATVAAP 188
>gi|373458578|ref|ZP_09550345.1| 50S ribosomal protein L25 [Caldithrix abyssi DSM 13497]
gi|371720242|gb|EHO42013.1| 50S ribosomal protein L25 [Caldithrix abyssi DSM 13497]
Length = 213
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 90/162 (55%), Gaps = 6/162 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ A R+ KG S +R R+ GK+P I+YG +K+PV + ++ + + L+ H S++
Sbjct: 4 LKLSAEIREDKGKSAARRYRRQGKIPAILYGEDKEPVHVLVDEHDLGIGLRG---HHSVI 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
NL I GK ++R Q H VLH DF + KI ++VP+ F E P +
Sbjct: 61 NLVIKGKPHRCIVREVQYHPLTSKVLHVDFLGIQGHDKIEMEVPIKF---EGKPEGVRDG 117
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIK 162
I + + L I+ LP+N+P I IN++ +++ +I L D++
Sbjct: 118 GIFNEIKRILDIAVLPENIPDEIVINVDSLKIGDAIRLKDLQ 159
>gi|86136043|ref|ZP_01054622.1| ribosomal protein L25 [Roseobacter sp. MED193]
gi|85826917|gb|EAQ47113.1| ribosomal protein L25 [Roseobacter sp. MED193]
Length = 209
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A ER G +R R+ G VPG++YGG+ DP+ I + N++ LK F S++ NL
Sbjct: 8 LVAEERAGTGKGAARAARRAGMVPGVVYGGDADPLSIQIPFNVLLKKLKAGKFKSTLWNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G+ ++ V+ R+ Q K L H D R+ +I++ +P+ FIN + P VK
Sbjct: 68 KVEGQEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSEINLFIPVEFINEDTCPGVK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+++ V ++ + ++P+ + ++L ++ I +S I+LP G
Sbjct: 127 MLAVVRPEVELVVTAGDIPEKLTVDLANSQIGDVITISSIELPTG 171
>gi|347761434|ref|YP_004868995.1| 50S ribosomal protein L25 [Gluconacetobacter xylinus NBRC 3288]
gi|347580404|dbj|BAK84625.1| LSU ribosomal protein L25P [Gluconacetobacter xylinus NBRC 3288]
Length = 205
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQL 78
R+ G VPG+IYG ++PV I+++ ++ L K + S I ++ + V + LLR QL
Sbjct: 24 RRAGLVPGVIYGAGQEPVLIALDPRIVRRELHKSGWRSRIYDISVEKGVSVHALLREVQL 83
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN 138
H +H D+QR+ K+HV+V + F E+SP VK +++ V + + P N
Sbjct: 84 HPVSDAPIHVDYQRLAAGHKVHVEVEIRFEGEEVSPGVK-RGGVMNIVRHTVDVVVDPAN 142
Query: 139 LPKFIEINLEKMEVNTSIHLSDIK 162
+P+F +L K++ + ++ +D+K
Sbjct: 143 IPEFFTADLSKLDFHDNVRWADLK 166
>gi|404497696|ref|YP_006721802.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter
metallireducens GS-15]
gi|418067966|ref|ZP_12705292.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter
metallireducens RCH3]
gi|109893365|sp|Q39RQ9.1|RL25_GEOMG RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|78195298|gb|ABB33065.1| ribosomal protein L25 [Geobacter metallireducens GS-15]
gi|373557860|gb|EHP84240.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter
metallireducens RCH3]
Length = 195
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 7 ERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
+R+K G SR LR +G+VPG++YG +PV +S++ + A+ E +++++L+ G
Sbjct: 10 QREKAGKGVSRKLRAVGRVPGVVYGKGIEPVAVSVDAKELAAAIVGEGGRNNLISLQGGG 69
Query: 67 KV--ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
+ V++ + Q K + DF +++ ++K+ V VP+ I + + ++
Sbjct: 70 SLNGNTVIVADLQKAPLKGTFISVDFHKINMDEKVRVHVPVALIGTALGAK---EGGMLE 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP 177
V+ L + CLP +P+ +E+++ + + +IH+ ++ L GV + +DP
Sbjct: 127 LVMHSLDLECLPSQIPEHVEVDVTNLAIGHAIHVGELVLAAGVKAL----DDP 175
>gi|339499419|ref|YP_004697454.1| 50S ribosomal protein L25 [Spirochaeta caldaria DSM 7334]
gi|338833768|gb|AEJ18946.1| 50S ribosomal protein L25 [Spirochaeta caldaria DSM 7334]
Length = 210
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A +R G++ + LR+ GK+P ++YG + + I ++ + + K S++LNL
Sbjct: 6 LTAQKRAVTGSADAARLRRNGKIPAVVYGRSGQAMSIVLD-ALDFGRKIKGVSESTLLNL 64
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
I G V +++ Q +K +H DF V+ K +H KVP+ I + + V+L I
Sbjct: 65 SIDGAQHEVFIKDTQRDIFKGSFIHVDFYEVEKGKTVHAKVPVRVIGT--AEGVRLGG-I 121
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
+ + +L + CLPK+LP+ I+I++ ++ N ++H+ D+KL + V+ + E+
Sbjct: 122 LEAPLHELEVECLPKDLPEHIDIDVTNLKANEALHVRDLKLASEIRVLTNPEQ 174
>gi|58039600|ref|YP_191564.1| 50S ribosomal protein L25 [Gluconobacter oxydans 621H]
gi|68053025|sp|Q5FRT8.1|RL25_GLUOX RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|58002014|gb|AAW60908.1| LSU ribosomal protein L25P [Gluconobacter oxydans 621H]
Length = 218
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELV-LLRNFQL 78
R+ G VP +IYGG ++P I+++ +I L + + S + NL G + L+R+ QL
Sbjct: 24 RREGLVPAVIYGGKQEPSIIALDPRVIMKELHRGGWSSRVYNLAAEGAEPVAALIRDVQL 83
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISD-LYISCLPK 137
H +H DFQRV K+HV+V + F+ E SP +K + NV+ + + P
Sbjct: 84 HPVTDAPIHVDFQRVAAGTKVHVEVSIAFVGEEKSPGIKRGGVL--NVVRHYVDVQADPA 141
Query: 138 NLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
N+P+ L ++++ ++ +D+K GV + D IA+ P
Sbjct: 142 NIPEHFTAELSGLDIHDNVRWTDLKGTEGVVLGSGQAADMVIASIAAP 189
>gi|339022201|ref|ZP_08646162.1| LSU ribosomal protein L25P [Acetobacter tropicalis NBRC 101654]
gi|338750780|dbj|GAA09466.1| LSU ribosomal protein L25P [Acetobacter tropicalis NBRC 101654]
Length = 205
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIY-GKVELVLLRNFQL 78
R+ G VPG+IYGG K+P I+++ ++ ++ + S + ++I G E L+R+ QL
Sbjct: 24 RRAGLVPGVIYGGKKEPALIALDPRIVIKGIQASGWRSRVYEIKIEGGATERALIRDIQL 83
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN 138
H K H DF R+ +++ V+V +HF E SP +K +++ V + + ++
Sbjct: 84 HPVKDTPEHVDFMRLAAGQRVTVEVSVHFSGEEKSPGIK-RGGVLNIVRHTVEVEADAEH 142
Query: 139 LPKFIEINLEKMEVNTSIHLSDIK 162
+P+F ++L +++N ++ D+K
Sbjct: 143 IPEFFSVDLSTLDINDNVRWEDLK 166
>gi|114328980|ref|YP_746137.1| 50S ribosomal protein L25 [Granulibacter bethesdensis CGDNIH1]
gi|114317154|gb|ABI63214.1| LSU ribosomal protein L25P [Granulibacter bethesdensis CGDNIH1]
Length = 219
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R + G +R R+ GKVP +IYG + P I ++ +I+ L + + S +
Sbjct: 12 QIEAEARSRAGKGAARATRREGKVPAVIYGARQTPDLIKLDPRIIHRELNRGGWRSRLYE 71
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+ + G L+R+ Q H H DFQR+ + + V V + F N SP +K
Sbjct: 72 INVDGASTRALIRDVQFHPVTDAPEHVDFQRLAAGEPVRVAVAVQFQNEATSPGLK-RGG 130
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIK 162
+++ V + + C P ++P+ E +L +++ +I SD+K
Sbjct: 131 VLNIVRHTVEVLCDPDHVPEHFEADLGTLDIGDNIRWSDLK 171
>gi|295687989|ref|YP_003591682.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
segnis ATCC 21756]
gi|295429892|gb|ADG09064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
segnis ATCC 21756]
Length = 199
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R GT +R +R+ GK+PG++YGG K PV I++ N +L ++ L+ +
Sbjct: 11 RDGSGTGAARAVRREGKIPGVLYGGGKAPVNIAVRANEFRKSLYTGKLLGHLVTLQHGDE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC--IISN 125
+ V+ + Q H +H D RVD + I ++VP+HF N +IS +K +I +
Sbjct: 71 KQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHDISVGLKKGGSLEVIRH 130
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+ ++C +P+ + I+L ++ +I +S++KLP GV + + D IAT
Sbjct: 131 TVE---LACPADKIPEELVIDLASHDIGDTIRISEVKLPEGVK--PAVDRDFVIAT 181
>gi|323701607|ref|ZP_08113279.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum nigrificans DSM 574]
gi|323533380|gb|EGB23247.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum nigrificans DSM 574]
Length = 210
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R+++ S R +R+ G +PG++YG + IS++ + L ++++N+ +
Sbjct: 8 ANPREERTRSSLRQIREQGGIPGVLYGKQTGSMAISVDAKELKKILGSVNGRNTLINMNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V++++ Q+ + + H DFQ V KI VP+H + + I + II
Sbjct: 68 NGAKRTVIVKSLQMDHLHRGIQHVDFQEVSENTKIRTVVPVHLVGTPIG---VTHGGIIQ 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ + + + CLP +P IE+++ +E+ ++ +SD+ LP GV V+
Sbjct: 125 HDLRSVEVECLPSQIPNHIEVDISNLEIGDALSVSDLNLPPGVKVL 170
>gi|399073436|ref|ZP_10750484.1| ribosomal protein L25, Ctc-form [Caulobacter sp. AP07]
gi|398041802|gb|EJL34857.1| ribosomal protein L25, Ctc-form [Caulobacter sp. AP07]
Length = 199
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT SR R+ GK+PGI+YGG K PV I++ N AL ++ L+
Sbjct: 11 RDRAGTGGSRETRRAGKIPGILYGGEKAPVNIAVKSNEFRKALYTGKLLGHLVTLQHGED 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V+ + Q H +H D RV + I ++VP+HF N +IS +K + V
Sbjct: 71 KQSVIAKAIQFHPVTDEPIHFDLFRVGEHQLIKIQVPVHFKNHDISVGMKKGGS-LEIVR 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+ ++C +P+ + I+L ++ +I +S++KLP GV
Sbjct: 130 HTVELACPADAIPEELVIDLAHHDIGDTIRISEVKLPEGV 169
>gi|322433960|ref|YP_004216172.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Granulicella
tundricola MP5ACTX9]
gi|321161687|gb|ADW67392.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Granulicella
tundricola MP5ACTX9]
Length = 232
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Query: 16 SRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK-VELVLLR 74
+R +R GK+P +YG D V ++++ ++ L E+ H++I +L + G + ++
Sbjct: 23 ARRVRVAGKIPATVYGAGIDAVAVTVDPKVVTKILHSESGHNTIFDLNVEGAPLAKAMIV 82
Query: 75 NFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISC 134
++Q K +LHADF+R+ +K + V VP+ + S I VK ++ ++ ++ I C
Sbjct: 83 DWQHEPIKGKLLHADFKRIAMDKAMRVSVPV--LLSGIPVGVKTGGGVLDQIMREVEIEC 140
Query: 135 LPKNLPKFIEINLEKMEVNTSIHLSDI 161
LP ++P I++++ +E+ +IH+SD+
Sbjct: 141 LPSDIPDHIDVDVANLELYGAIHISDL 167
>gi|84500224|ref|ZP_00998490.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597]
gi|84392158|gb|EAQ04426.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597]
Length = 188
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 85/144 (59%), Gaps = 2/144 (1%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQLHAYKK 83
VPGI+YGG+ DP+ I + N + LK F +++ NL++ G ++ V+ RN Q K
Sbjct: 2 VPGIVYGGDNDPLPIQIPFNDLLKKLKAGRFLATLWNLKVDGHDDVRVICRNVQRDVVKD 61
Query: 84 LVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFI 143
L H D R+ ++++ +P+ FIN + +P +K +++ V +D+ ++ L ++P+ I
Sbjct: 62 LPTHLDLMRLRRTSRVNLHIPVEFINEDAAPGIK-RGGVLTVVRADVELNVLAGDIPEKI 120
Query: 144 EINLEKMEVNTSIHLSDIKLPRGV 167
++L +E+ ++ +S + LP GV
Sbjct: 121 VVDLTGLEIGDTVTISMVNLPDGV 144
>gi|119715156|ref|YP_922121.1| 50S ribosomal protein L25 [Nocardioides sp. JS614]
gi|119535817|gb|ABL80434.1| LSU ribosomal protein L25P [Nocardioides sp. JS614]
Length = 223
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
KI A R + G +R +R+ KVP ++YG DPV +++ + ALK +++L
Sbjct: 4 KIKAEARTEFGKGAARRIRRADKVPAVVYGHGNDPVHLTLPGHETMMALKH-GGANALLE 62
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L+I GK +L L + Q+ K+ + H DF V +K+ V+VP+H +
Sbjct: 63 LDIDGKSQLALTKQVQIDPIKRHLEHIDFVAVKRGEKVTVEVPVHLVGD------AARET 116
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++ + + + ++P+ IE+++E E T IH SD+ +P G +++
Sbjct: 117 LVVTETATIQLEAEATHIPEHIEVSIEGAEAGTQIHASDLTIPSGSTLL 165
>gi|375090515|ref|ZP_09736829.1| ribosomal protein L25, Ctc-form [Facklamia languida CCUG 37842]
gi|374565276|gb|EHR36547.1| ribosomal protein L25, Ctc-form [Facklamia languida CCUG 37842]
Length = 206
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M + A R K GT S+ R GK+P +YGG+ + + +N LKKE +++
Sbjct: 1 MALDAELRTKTGTGASKKARNEGKIPVSLYGGDLEATSLLVNRREFEALLKKEG-SNAVF 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ GK + V+L+NF+ A D + ++K+ V++PL +N+E +
Sbjct: 60 DVNYDGKTQKVILKNFEKAALADQFYSVDLAAISADQKLQVEIPLVLVNAE-----TIKE 114
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
I+ V++ + + P +P EI++ ME+ S ++D+++P GV V+ +EE
Sbjct: 115 GIVELVMNTVEVETAPDTIPNSFEIDVTGMEIGDSKSIADLEVPAGVEVLVESEE 169
>gi|197120548|ref|YP_002132499.1| 50S ribosomal protein L25/general stress protein Ctc
[Anaeromyxobacter sp. K]
gi|226736277|sp|B4ULC3.1|RL25_ANASK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|196170397|gb|ACG71370.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Anaeromyxobacter sp. K]
Length = 240
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R ++G +R LR+ G +P ++YGG ++P ++++ + A++ +++L L++
Sbjct: 8 AQKRTEQGKGPARRLRQQGLIPAVVYGGKREPTHVALDPATLLKAIETPHKFNTLLELQV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G + VL +++ + + +LHADF V ++ + V+VP+ + A I+S
Sbjct: 68 DGASKHVLFKDYTVDPVTRKLLHADFLEVSLDQPVRVEVPVATVGRAAGVA---EGGILS 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
++ + LP +P IE+++ ++++ S+H+S++K P G
Sbjct: 125 VATHEVVVEALPNKIPVRIEVDVTELKIGRSLHVSELKPPEG 166
>gi|320109099|ref|YP_004184689.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Terriglobus
saanensis SP1PR4]
gi|319927620|gb|ADV84695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Terriglobus
saanensis SP1PR4]
Length = 233
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 91/166 (54%), Gaps = 5/166 (3%)
Query: 16 SRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG-KVELVLLR 74
+R +R G +P ++YG +D V ++++ I L E+ H++I +L + G V ++
Sbjct: 23 ARRVRVSGLIPAVVYGAGQDSVAVTVDPKAITRILHSESGHNTIFDLSVEGTGVVKAMIV 82
Query: 75 NFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISC 134
++Q K +LH DF+R+ +K + V VP+ + VK + I+ ++ ++ I C
Sbjct: 83 DWQYEPIKGKLLHIDFKRIAMDKAMRVSVPVMLTGVPVG--VKNSGGILDQILREVQIEC 140
Query: 135 LPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
LP ++P I++++ +E+ +IH++D LP G + EE +A
Sbjct: 141 LPGDIPSHIDVDVAGLELYGAIHVAD--LPHGGKIKFLEEETALVA 184
>gi|108763637|ref|YP_633230.1| 50S ribosomal protein L25 [Myxococcus xanthus DK 1622]
gi|108467517|gb|ABF92702.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Myxococcus
xanthus DK 1622]
Length = 220
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 90/166 (54%), Gaps = 4/166 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGN-KDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R+ G +R LR G +P ++YG + + PV IS+N + A+ ++++ ++
Sbjct: 10 AKPREGSGKGVARRLRAQGLIPAVVYGKHLEKPVHISVNPKAVRQAINTPHKFNTLIQIK 69
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ G VLL+++Q+ + +LHADF V K+ V VPL A + ++
Sbjct: 70 VEGGDRQVLLKDYQMDPVTRAILHADFLDVRPTDKVKVNVPLVLSGRAQGVA---DGGLL 126
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ ++ + LP +P+ IE+++ M++ +H++D+KLP GVSV
Sbjct: 127 TQARREIEVWSLPGAIPEKIEVDVTPMKIAEVLHINDLKLPEGVSV 172
>gi|354595262|ref|ZP_09013296.1| 50S ribosomal protein L25/general stress protein Ctc
[Commensalibacter intestini A911]
gi|353671304|gb|EHD13009.1| 50S ribosomal protein L25/general stress protein Ctc
[Commensalibacter intestini A911]
Length = 220
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK-VELVLLRNFQL 78
R+ G VPG++YGG +P I+++ +I L ++ S + + + GK + LLR Q+
Sbjct: 26 RREGLVPGVVYGGKSEPAMIAIDPRLIMRELHG-SWRSQLYQIVVDGKKTSVALLRAVQM 84
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN 138
H LH DFQR+ + I V++P+HF+ + P K + +++ V+ + I+C +N
Sbjct: 85 HPVTDRPLHVDFQRMVAGQHIRVEIPVHFVGEDECPGFKRDG-VLNTVMHSIEINCDVEN 143
Query: 139 LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+P+ +L ++++ +I S +K V+ + EED +A+ P
Sbjct: 144 IPEAFIADLSGLDIHDTISWSQLKGTENVTHTNQNEEDFVVASISAP 190
>gi|260574076|ref|ZP_05842081.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter
sp. SW2]
gi|259023542|gb|EEW26833.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter
sp. SW2]
Length = 203
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G VPGI+YG K+P I++ + + LK F ++ NL+I G+
Sbjct: 13 RMGTGKGAARQARREGYVPGIVYGDGKEPQAINVKYYTLLKRLKAGRFLQTLFNLKIEGQ 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V+ R Q K L H DF R+ ++++ + + FIN E SP +K ++ V
Sbjct: 73 DDVRVICRGVQRDVVKDLPTHVDFMRLHQASRVNLFIHVTFINHEASPGLKRGGALVV-V 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++ + ++P I ++L + IH+ D+ LP G + + + + IA P
Sbjct: 132 RPEVELEVTAGDIPDHITVDLAGRNIGDVIHIQDVVLPEGAA--PTIDRNFVIANISAPS 189
Query: 187 NTLESDNNS 195
SDN
Sbjct: 190 GLRSSDNEG 198
>gi|83951141|ref|ZP_00959874.1| ribosomal protein L25 [Roseovarius nubinhibens ISM]
gi|83839040|gb|EAP78336.1| ribosomal protein L25 [Roseovarius nubinhibens ISM]
Length = 193
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQLHAYKK 83
VPGI++GG+ +P+ I++ N ++ LK F S++ NL++ G+ ++ V+ R+ Q K
Sbjct: 2 VPGIVFGGDAEPLPINIPFNELFKRLKAGRFKSTLFNLKVEGQEDVRVICRDVQRDVVKD 61
Query: 84 LVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFI 143
L H D R+ KI++ +PL F N E PA+K +++ V +++ + ++P I
Sbjct: 62 LPTHLDLMRLRRTTKINLFIPLDFTNEEECPAIK-KGGVLTTVRNEIELIVTAGDIPDAI 120
Query: 144 EINLEKME-VNTSIHLSDIKLPRGV 167
E++L K+E + +I +S I LP+G
Sbjct: 121 EVDLTKIENIGDTITISMIDLPKGA 145
>gi|194017996|ref|ZP_03056603.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061]
gi|194010333|gb|EDW19908.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061]
Length = 208
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 112/214 (52%), Gaps = 19/214 (8%)
Query: 4 IAFERKKKGTSFSRN-LRKI---GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
+A + K T F R+ L+KI G VPG+IYG N D + +S++ + L+ E ++I
Sbjct: 1 MATLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDEG-KNTI 59
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ L++ G+ + V++ Q K ++HADFQ VD +++I VP+ I S VK +
Sbjct: 60 ITLDVNGETKSVMVTELQTDPLKNELVHADFQVVDLQREIEADVPVQLIGE--SKGVK-D 116
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ + +L I+ PK++P+ IE ++ +EVN + ++D+ + V + EE +
Sbjct: 117 GGVLQQPLFELSITAKPKDIPQHIEADITNLEVNDVLTVADLSVQSSYQVNNDPEE---V 173
Query: 180 ATAIIPVNTLESDNNSSIE--------KEKNNNS 205
+I+P E S E KEK+N+
Sbjct: 174 VASILPPQQSEVPEPDSAEEPKEPEAIKEKDNDG 207
>gi|406705753|ref|YP_006756106.1| 50S ribosomal protein L25 [alpha proteobacterium HIMB5]
gi|406651529|gb|AFS46929.1| LSU ribosomal protein L25P [alpha proteobacterium HIMB5]
Length = 237
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 19 LRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQL 78
+RK G VP I+YGG + IS++ + ++K+ F+S+I++L I GK + VL R
Sbjct: 20 IRKEGNVPAIVYGGKDNNENISISKKTLKSLVEKDNFYSNIISLNINGKTQNVLPREVIY 79
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN 138
H +H DFQRV KI + VP+ FIN E SP +K +++ V + + C +
Sbjct: 80 HIISDEPIHVDFQRVVPGVKIRIDVPVQFINQEKSPGLK-KGGVLNIVRRKVELRCPSEK 138
Query: 139 LPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+P+ + I+L+ +++ S +S IKL + V V D IAT P
Sbjct: 139 IPESLVIDLDGVDIGESFKISSIKLEQDV-VPTIQGRDFVIATLAAP 184
>gi|333922332|ref|YP_004495912.1| 50S ribosomal protein L25 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333747893|gb|AEF93000.1| 50S ribosomal protein L25 [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 210
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 3/166 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R+++ S R +R+ G +PG++YG + IS++ + L ++++N+ +
Sbjct: 8 ANPREERTRSSLRQIREQGGIPGVLYGKQTGSMAISVDAKELKKILGSVNGRNTLINMNV 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V++++ Q+ + + H DFQ V KI VP+H + + I + II
Sbjct: 68 NGAKRTVIVKSLQMDHLHRGMQHVDFQEVSENTKIRTVVPVHLVGTPIG---VTHGGIIQ 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
+ + + + CLP +P IE+++ +E+ ++ +SD+ LP GV V+
Sbjct: 125 HDLRSVEVECLPSQIPNHIEVDISNLEIGDALSVSDLNLPPGVKVL 170
>gi|167948535|ref|ZP_02535609.1| 50S ribosomal protein L25/general stress protein Ctc [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 148
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R G SR LR+ G VPGIIYGG+++P IS+ HN + L E F+S ILN
Sbjct: 23 EITAQPRSDTGKGASRRLRRTGMVPGIIYGGHQEPSMISLAHNELILHLDHEAFYSHILN 82
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKI 99
L++ E V+L++ Q H K ++H DFQR+ +KI
Sbjct: 83 LKVGDATEQVVLKDLQRHPAKPFIMHIDFQRISAGEKI 120
>gi|449128421|ref|ZP_21764667.1| 50S ribosomal protein L25 [Treponema denticola SP33]
gi|448940829|gb|EMB21733.1| 50S ribosomal protein L25 [Treponema denticola SP33]
Length = 210
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 6/177 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER G + + +RK G++P ++Y + V I ++ + L K S+I+ L
Sbjct: 8 ANERSTYGKNAAVKMRKAGRIPAVMYDRHGKSVPIDVDERE-FMKLFKLVTESTIVTLNA 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V +++FQ + + H DF V+ K + KV + E SP + I+
Sbjct: 67 AGKDYEVFIKDFQHDIVRDKIKHIDFYEVERGKTLRTKVKIKL---EGSPEGVRHGGILE 123
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
I++L + CLPK+LP I +++ ++VN S+H+ DIKLP V+V+ T +D T+A
Sbjct: 124 TGITELELECLPKDLPARIVVDVSALDVNQSLHVRDIKLPEAVTVL--TSDDITVAA 178
>gi|85707110|ref|ZP_01038198.1| ribosomal protein L25 [Roseovarius sp. 217]
gi|85668396|gb|EAQ23269.1| ribosomal protein L25 [Roseovarius sp. 217]
Length = 208
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER G +R R+ G VPGI++GG+K+P+ I++ N + LKK F S++ NL++
Sbjct: 10 AQERAGTGKGAARAARREGMVPGIVFGGDKEPLPINIPFNALLKRLKKGRFKSTLFNLQV 69
Query: 65 YGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G+ ++ V+ R+ Q K L H D R+ +I++ + + FIN E PA++ ++
Sbjct: 70 EGQDDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRINLFIHVDFINHENCPALR-KGGVL 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKM-EVNTSIHLSDIKLPRG 166
+ V +++ ++ ++P + ++L K+ ++ + +S I LP G
Sbjct: 129 TVVRNEVELTVTAGDIPDHLTVDLSKISKIGDVVTISMIDLPEG 172
>gi|386712406|ref|YP_006178728.1| 50S ribosomal protein L25 [Halobacillus halophilus DSM 2266]
gi|384071961|emb|CCG43451.1| 50S ribosomal protein L25 [Halobacillus halophilus DSM 2266]
Length = 220
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 99/183 (54%), Gaps = 11/183 (6%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R + S +R LR+ G VP ++YG +K+P+ +S+N + ++ E ++I++L+I
Sbjct: 7 ASQRNELKQSVTRELRQEGNVPSVVYGKDKEPITVSVNSIELLKTVRDEG-KNAIISLDI 65
Query: 65 YGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
GK + V+L +Q+ K ++HADF VD +++ V+VP+H E A ++
Sbjct: 66 EGKDSVDVMLHEYQIDPLKDELIHADFYIVDMSQEMDVEVPVHL---EGEAAGSKEGGVL 122
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+ DL + P N+P I I++ ++ + SI +SDI G + EDP T I
Sbjct: 123 QQPLYDLAVRAKPANIPDEILIDVSELNIGDSILVSDITSSSGYEIT----EDPD--TTI 176
Query: 184 IPV 186
+ V
Sbjct: 177 VAV 179
>gi|443310324|ref|ZP_21039980.1| ribosomal protein L25, Ctc-form [Synechocystis sp. PCC 7509]
gi|442779603|gb|ELR89840.1| ribosomal protein L25, Ctc-form [Synechocystis sp. PCC 7509]
Length = 206
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 103/191 (53%), Gaps = 17/191 (8%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSI 59
M+I +K+ S R LR+ G +P +YG + + +++ + LKK +S++
Sbjct: 1 MEITVECQKRAEGSKPRALRREGLIPASLYGHKGTESIMLTVKAKTLEQLLKKAGVNSTV 60
Query: 60 LNLEI-----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
++L I GK LLR Q+H K+ H F + ++ + V+VP+HF+ +P
Sbjct: 61 VDLNIPDLSWRGKT---LLREVQIHPVKRWAYHVSFFALAAQESVEVEVPVHFVGE--AP 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
VK+ ++ V+++L + C P ++P IE+++ + + +++S++ LP G++V+
Sbjct: 116 GVKMEGGVLDVVLTELEVKCAPGSIPDAIEVDISGLHLKDILYVSELVLPAGITVLG--- 172
Query: 175 EDP--TIATAI 183
DP T+A+ +
Sbjct: 173 -DPGRTVASVV 182
>gi|262197679|ref|YP_003268888.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium
ochraceum DSM 14365]
gi|262081026|gb|ACY16995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium
ochraceum DSM 14365]
Length = 206
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSIL 60
K+ R G S +R LR G++PGI YG G + P+ + + +L ++++
Sbjct: 5 KLTVKRRNITGKSMARKLRTQGRLPGICYGSGVEQPIMLDFDGRAFRASLDPTKRQNTVI 64
Query: 61 NLEI-----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPA 115
+L + G+ V+++++Q+ ++ + H DF VDT ++ +VPL F S
Sbjct: 65 DLTVEDDAGAGQSFPVMVKDYQIDPIRRELTHVDFITVDTSSEVTAEVPLEFTGK--SKG 122
Query: 116 VKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
V+L + V +L + C P ++P I I++ ++ N IH+ D+KLP G V ST E
Sbjct: 123 VELGG-TLHVVRHELEVRCKPADIPSKIVIDISDLDTNDVIHVRDLKLPEG--VFASTAE 179
Query: 176 DPTIATAI 183
TI T +
Sbjct: 180 QLTIITCV 187
>gi|417859353|ref|ZP_12504409.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens F2]
gi|338822417|gb|EGP56385.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens F2]
Length = 174
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKL 84
+P +IYG + P+ I+++ N + + F +++ +++ GK VL +++QL +
Sbjct: 2 IPAVIYGDKQAPISIALSTNEVTKRIHAGGFMTTVAIIDVDGKKIKVLPKDYQLDPVRDF 61
Query: 85 VLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIE 144
+H DF RV ++V+VP+HF+N E S +K+ +++ V + C ++P+FI
Sbjct: 62 TMHVDFLRVSGNTLVNVEVPVHFVNEEKS-DIKIGG-VLNIVRHTVEFHCPANDIPEFIT 119
Query: 145 INLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVNTL 189
++L +++ ++H+S++KLP+ ++ + + + D TIAT + P +
Sbjct: 120 VDLAGLKIGDNVHISNVKLPKNITPVIA-DRDFTIATIVAPAGGV 163
>gi|255264479|ref|ZP_05343821.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62]
gi|255106814|gb|EET49488.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62]
Length = 213
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G VPGI+YGG ++P+ I++ +N+++ LK F S++ NL++ G
Sbjct: 13 RTGTGKGAARQARRDGLVPGIVYGGGEEPLAINIPYNVLFKKLKAGRFLSTLFNLKVEGH 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V+ R Q K L H D R+ KI + +P+ F + P ++ ++S V
Sbjct: 73 DDVRVICRKVQRDVVKDLPTHLDLMRLKRTTKIALFIPVEFEGEDDCPGIR-KGGLLSVV 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++ + ++P+ + ++ +E+ +I +S I+LP G + + D I P
Sbjct: 132 RPEVELVVTAGDIPEKLTASIAGLEIGDTITISSIELPAGAKA--TIDRDFVIGNIAAPA 189
Query: 187 NTLESDNNSSIEK 199
S ++ E+
Sbjct: 190 GLASSSDDEDGEE 202
>gi|187251696|ref|YP_001876178.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Elusimicrobium minutum Pei191]
gi|254801048|sp|B2KE95.1|RL25_ELUMP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|186971856|gb|ACC98841.1| Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Elusimicrobium minutum Pei191]
Length = 219
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 8 RKKKGT-SFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R+K G +R KVP +IYGG K+P+ +S+ + LK +S++ L
Sbjct: 11 REKAGVKGVLSAIRAEKKVPAVIYGGQKEPISVSITEKDLKAILK--AGSNSVVTLSTPA 68
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E +++ Q H K H DFQR+ ++KI V VPL S VK+ +I+ V
Sbjct: 69 GKETAIIKEVQYHVVKDTPNHVDFQRISLKEKIDVVVPLKLTGE--SADVKIYGALINQV 126
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE----------ED 176
+ ++ I LP +P I +++ + ++ +IH+SD+ L + + V+ E E+
Sbjct: 127 LREVAIRALPTAIPHEIAVDISALTIHKAIHISDLSLSKDIEVLGDPERAIVHLMVPREE 186
Query: 177 PTIATAIIPVNTLESDNNSSIEKEKNNNS 205
T+A P +T +SS + +K+ +
Sbjct: 187 ETVAA---PADTAVQPESSSTKGKKDEDG 212
>gi|434393872|ref|YP_007128819.1| LSU ribosomal protein L25P [Gloeocapsa sp. PCC 7428]
gi|428265713|gb|AFZ31659.1| LSU ribosomal protein L25P [Gloeocapsa sp. PCC 7428]
Length = 223
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGN-KDPVKISMNHNMIYHALKKETFHSSI 59
M+I +K+ S LR+ G +P +YG N + + +++ + LK+ + ++++
Sbjct: 1 MEITVEGKKRAEGSKPNALRRSGLIPANLYGHNGTESIHLTLEAKTVETLLKQASVNNTL 60
Query: 60 LNLEI-----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
+ L I GK LLR Q H K+ H F V + + V+VPLHF+ +P
Sbjct: 61 IQLNISDLPWRGK---ALLREVQRHPTKRFPYHLSFFSVAAQDTVEVEVPLHFVGE--AP 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHST 173
VK+ + V++ + + C P +P+ IEI++ M + ++L ++ LP GVS++ T
Sbjct: 116 GVKIEGGALDTVLTHIQVRCAPDRIPETIEIDVSNMNIGDVVYLQELVLPEGVSLVSET 174
>gi|157690834|ref|YP_001485296.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
pumilus SAFR-032]
gi|166987890|sp|A8F919.1|RL25_BACP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157679592|gb|ABV60736.1| stress induced RNA binding ribosomal protein L25p family [Bacillus
pumilus SAFR-032]
Length = 208
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 112/214 (52%), Gaps = 19/214 (8%)
Query: 4 IAFERKKKGTSFSRN-LRKI---GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
+A + K T F R+ L+KI G VPG+IYG N D + +S++ + L+ E ++I
Sbjct: 1 MATLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDEG-KNTI 59
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ L++ G+ + V++ Q K ++HADFQ VD +++I VP+ I S VK +
Sbjct: 60 ITLDVNGETKSVMVTELQTDPLKNELVHADFQVVDLQREIEADVPVQLIGE--SKGVK-D 116
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ + +L I+ PK++P+ IE ++ +EVN + ++D+ + V + EE +
Sbjct: 117 GGVLQQPLFELSITAKPKDIPQHIEADITNLEVNDVLTVADLPVQSSYQVNNDPEE---V 173
Query: 180 ATAIIPVNTLESDNNSSIE--------KEKNNNS 205
+I+P E S E KEK+N+
Sbjct: 174 VASILPPQQSEVPEPDSEEEPKEPEAIKEKDNDG 207
>gi|404254170|ref|ZP_10958138.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. PAMC 26621]
Length = 231
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 1/194 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M + A R++ G SR LR+ G+VP +IYG ++P+ I + + L F +S++
Sbjct: 5 MTLAAETREQVGKGASRLLRREGRVPAVIYGNKQEPLSIHVEEKALMRLLNTGHFMNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L+ G+ L ++ + +H DF R+ + V VP+ F++ + +P +K +
Sbjct: 65 MLDAGGQQVRTLPKDVTFDVVTERPVHVDFLRIGAHSTVTVAVPVVFVDEDDAPGIKKDG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ ++ + C +P I I+L +EV SIH+SD+KLP+GV S + D IA
Sbjct: 125 GVLNVTRHEIEVVCDAAEIPGEISISLAGLEVGASIHISDVKLPKGVEPSIS-DRDFAIA 183
Query: 181 TAIIPVNTLESDNN 194
T + P +D
Sbjct: 184 TIVPPTVPTAADEE 197
>gi|402548569|ref|ZP_10845422.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86C]
Length = 165
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Query: 5 AFERKKKGTSFSRNLRKI-GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R++ G++ +R +RK+ G +P IIYG KD + I + N + A + E F++ +L ++
Sbjct: 9 ADSRERTGSNKARVIRKVDGMIPAIIYGDEKDSLNIKLKLNELTKASQNELFYTQVLIIK 68
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
E V+L+ Q K LHADF RV + K+ V +P++F+N E VK ++
Sbjct: 69 NGDLEEKVVLKELQKDPAKGKFLHADFLRVSRKTKLKVIIPINFLNEEECAGVKNECGVL 128
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLS 159
+ I ++ + CL N+P+ I+I++ +++ + + L
Sbjct: 129 NKTIREVEVMCLAGNIPESIDIDVTALDLVSQLDLQ 164
>gi|16124740|ref|NP_419304.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
crescentus CB15]
gi|221233455|ref|YP_002515891.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter
crescentus NA1000]
gi|71153131|sp|Q9AAV8.1|RL25_CAUCR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801041|sp|B8GZU9.1|RL25_CAUCN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|13421662|gb|AAK22472.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
crescentus CB15]
gi|220962627|gb|ACL93983.1| LSU ribosomal protein L25P [Caulobacter crescentus NA1000]
Length = 197
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R GT +R R+ GKVPG++YGG K PV I++ N +L ++ L+ +
Sbjct: 11 RDGAGTGNARATRRAGKVPGVLYGGGKAPVNIAVKANEFRKSLYTGKLLGHLVTLQYGEE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC--IISN 125
+ V+ + Q H +H D RVD + I ++VP+HF N E S +K +I +
Sbjct: 71 KQSVIAKAVQFHPVTDEPVHFDLYRVDEHQLIKIEVPVHFKNHETSVGLKKGGTLEVIRH 130
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+ ++C +P+ + I+L ++ I +S++KLP GV
Sbjct: 131 TVE---LACPADKIPEELVIDLAGHDIGDVIRISEVKLPEGV 169
>gi|429768221|ref|ZP_19300387.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta 470-4]
gi|429189363|gb|EKY30200.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta 470-4]
Length = 204
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ GT +R R+ G VPG++YGG+K PV IS+N +L ++ L+ YGK
Sbjct: 11 RENVGTGGARAARRDGAVPGVLYGGDKAPVAISVNEREFRKSLYTGKLIGHLVTLK-YGK 69
Query: 68 -VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+ ++ Q LH D RV +++I + +P+ FIN++ +P + ++ V
Sbjct: 70 ETQPVIAKDIQFDPVSDRPLHFDLMRVGAKEEIKIDIPVAFINADEAPYTR-QGGMLEVV 128
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
+ I +P + ++L+ E+ +I +SDI+LP G S T+ D IA AI
Sbjct: 129 RHTVEIMVRADRIPAELVVDLKGREIGENIRISDIQLPEGASAT-ITDRDFMIA-AIKNS 186
Query: 187 NTLESD-NNSSIEKE 200
+SD ++++E E
Sbjct: 187 AAGQSDAGDTTVEGE 201
>gi|42526848|ref|NP_971946.1| 50S ribosomal protein L25 [Treponema denticola ATCC 35405]
gi|449109576|ref|ZP_21746210.1| 50S ribosomal protein L25 [Treponema denticola ATCC 33520]
gi|449112089|ref|ZP_21748644.1| 50S ribosomal protein L25 [Treponema denticola ATCC 33521]
gi|449113107|ref|ZP_21749622.1| 50S ribosomal protein L25 [Treponema denticola ATCC 35404]
gi|449115688|ref|ZP_21752148.1| 50S ribosomal protein L25 [Treponema denticola H-22]
gi|449120254|ref|ZP_21756640.1| 50S ribosomal protein L25 [Treponema denticola H1-T]
gi|449122659|ref|ZP_21758992.1| 50S ribosomal protein L25 [Treponema denticola MYR-T]
gi|449126080|ref|ZP_21762374.1| 50S ribosomal protein L25 [Treponema denticola OTK]
gi|449131094|ref|ZP_21767311.1| 50S ribosomal protein L25 [Treponema denticola SP37]
gi|71153672|sp|Q73N16.1|RL25_TREDE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|41817163|gb|AAS11857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Treponema
denticola ATCC 35405]
gi|448938794|gb|EMB19721.1| 50S ribosomal protein L25 [Treponema denticola OTK]
gi|448940440|gb|EMB21346.1| 50S ribosomal protein L25 [Treponema denticola SP37]
gi|448947649|gb|EMB28493.1| 50S ribosomal protein L25 [Treponema denticola MYR-T]
gi|448948398|gb|EMB29235.1| 50S ribosomal protein L25 [Treponema denticola H1-T]
gi|448955174|gb|EMB35941.1| 50S ribosomal protein L25 [Treponema denticola H-22]
gi|448956370|gb|EMB37131.1| 50S ribosomal protein L25 [Treponema denticola ATCC 33521]
gi|448958819|gb|EMB39547.1| 50S ribosomal protein L25 [Treponema denticola ATCC 33520]
gi|448960687|gb|EMB41396.1| 50S ribosomal protein L25 [Treponema denticola ATCC 35404]
Length = 211
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER G + + +RK G++P ++Y + V I ++ + L K S+I+ L
Sbjct: 8 ANERSTYGKNAAVKMRKAGRIPAVMYDRHGKSVPIDVDERE-FMKLFKLVTESTIVTLNA 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V +++FQ + H DF V+ K + KV + E SP + I+
Sbjct: 67 AGKDYEVFIKDFQHDIVSDKIKHIDFYEVERGKTLRTKVKIRL---EGSPEGVRHGGILE 123
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
I++L + CLPK+LP I +++ ++VN S+H+ DIKLP V+V+ T +D T+A
Sbjct: 124 TGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPEAVTVL--TSDDITVAA 178
>gi|296532495|ref|ZP_06895212.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957]
gi|296267179|gb|EFH13087.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957]
Length = 214
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I A R++ G +R RK G+VP +IYG ++ V +S++ + + K + S +
Sbjct: 5 IRIEAEARERAGKGAARATRKDGRVPAVIYGAKQEAVLLSLDPRDVMKEMHKGGWQSHLY 64
Query: 61 NLEIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ + G + L+R Q H K LH DFQR+ + I VKVP+ F N E +P +K
Sbjct: 65 EVAVAGAEPVRCLMREVQFHPVKDSPLHVDFQRLAPGQMIRVKVPVVFQNEESAPGIK-E 123
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDI 161
+++ V +L + P +P+ EI+L + S+ S++
Sbjct: 124 GGVLNVVRRELEVLSDPDQVPEQFEIDLGAAVIGDSLRWSNV 165
>gi|300864146|ref|ZP_07109041.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506]
gi|300337874|emb|CBN54187.1| 50S ribosomal protein L25 [Oscillatoria sp. PCC 6506]
Length = 201
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 100/190 (52%), Gaps = 13/190 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSI 59
M++ +K+ S LR+ G +P ++YG + + +++N + LKK ++++
Sbjct: 1 MELTVECQKRAEGSKPNALRRSGLIPAVLYGHSGAESIALTINAKTVETLLKKHVVNNAL 60
Query: 60 LNLEI-----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
+ L I GK LLR Q+H +K H F V T+ + V+V LHFI +
Sbjct: 61 IQLNIPDISWSGKT---LLREVQVHPWKGHPYHLSFFSVATQDSLEVEVNLHFIGEAV-- 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
VK+ I+ V++ L + C P N+P+ I +++ +M V ++H+ +++LP GV+ + E
Sbjct: 116 GVKMEGGILDPVLTQLKLKCKPDNIPEAINVDISEMHVGDALHIHELQLPEGVTPV--GE 173
Query: 175 EDPTIATAII 184
D + + +I
Sbjct: 174 PDQVVVSVLI 183
>gi|395493845|ref|ZP_10425424.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. PAMC 26617]
Length = 230
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 1/185 (0%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M + A R++ G SR LR+ G+VP +IYG ++P+ I + + L F +S++
Sbjct: 5 MTLAAETREQVGKGASRLLRREGRVPAVIYGNKQEPLSIHVEEKALMRLLNTGHFMNSVV 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L+ G+ L ++ + +H DF R+ + V VP+ F++ + +P +K +
Sbjct: 65 MLDAGGQQVRTLPKDVTFDVVTERPVHVDFLRIGAHSTVTVAVPVVFVDEDDAPGIKKDG 124
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ ++ + C +P I I+L +EV SIH+SD+KLP+GV S + D IA
Sbjct: 125 GVLNVTRHEIEVVCDAAEIPGEITISLAGLEVGASIHISDVKLPKGVEPSIS-DRDFAIA 183
Query: 181 TAIIP 185
T + P
Sbjct: 184 TIVPP 188
>gi|402703286|ref|ZP_10851265.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
helvetica C9P9]
Length = 203
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 99/186 (53%), Gaps = 9/186 (4%)
Query: 2 KIIAFERKKK---GTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSS 58
KI+ E K + GT +R LR+ G+VP IIYG K PV IS+ I +K F S
Sbjct: 3 KILELEAKSRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQ 62
Query: 59 ILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
++NL I K VL + +LH +V H DF ++ EK ++VP+ + E + VK
Sbjct: 63 LINLTIDKKQYKVLPKAVELHPVTDIVCHVDFVFLE-EKAQKMEVPVVYEGKERALGVKR 121
Query: 119 NSCIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP 177
N++ + + C N+P+ + I++ M + TS+ S I+LP+G S +T+++
Sbjct: 122 GGYF--NIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCS--FATKKEF 177
Query: 178 TIATAI 183
+AT I
Sbjct: 178 VLATII 183
>gi|410669124|ref|YP_006921495.1| 50S ribosomal protein L25 [Thermacetogenium phaeum DSM 12270]
gi|409106871|gb|AFV12996.1| 50S ribosomal protein L25 [Thermacetogenium phaeum DSM 12270]
Length = 215
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 9 KKKGTSFS-RNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIY-- 65
+++GT S R LR G +P ++YG V +S+ + + + S+++NL++
Sbjct: 11 RERGTKGSVRALRNQGMLPAVLYGKEVGNVLLSVPTKSLEQVITNHSIGSTLINLDVADG 70
Query: 66 --GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G LV+ R Q ++ +LHADF +VD ++I ++P+ + +P VK I+
Sbjct: 71 EKGGSYLVMCREIQRDPVRRELLHADFYQVDLTEEIETEIPVVLVGE--APGVK-QGGIL 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N++ + +S LP +P+ +E ++ K+E+ + + D++ P GV ++ S E IA I
Sbjct: 128 QNMLRTVIVSSLPTQIPERLEADISKLEIGDQLTVGDLEPPAGVRIVSSRES--VIALVI 185
Query: 184 IP 185
P
Sbjct: 186 PP 187
>gi|56695714|ref|YP_166065.1| 50S ribosomal protein L25 [Ruegeria pomeroyi DSS-3]
gi|68053037|sp|Q5LV90.1|RL25_SILPO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56677451|gb|AAV94117.1| ribosomal protein L25 [Ruegeria pomeroyi DSS-3]
Length = 207
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A ER G +R R+ G VPGI++GG+ +P+ I + N + LK F S++ NL
Sbjct: 8 LVALERTGTGKGAARQARRDGMVPGIVFGGDNEPLPIQIPFNRLLKMLKAGRFKSTLFNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G ++ V+ R+ Q K L H D R+ +I + + + F+N +P +K
Sbjct: 68 KVEGHEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSRIKLFIHVDFVNHAAAPGLK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
+++ V ++ + ++P+ I ++L + + + +S + LP G + E D IA
Sbjct: 127 VLTVVRPEVELEVTAGDIPESITVDLTGLNIGDVVTISSVTLPAGAK--PTVERDFVIA 183
>gi|422341832|ref|ZP_16422772.1| 50S ribosomal protein L25 [Treponema denticola F0402]
gi|449102800|ref|ZP_21739547.1| 50S ribosomal protein L25 [Treponema denticola AL-2]
gi|449107201|ref|ZP_21743858.1| 50S ribosomal protein L25 [Treponema denticola ASLM]
gi|451968897|ref|ZP_21922126.1| 50S ribosomal protein L25 [Treponema denticola US-Trep]
gi|325473900|gb|EGC77088.1| 50S ribosomal protein L25 [Treponema denticola F0402]
gi|448963002|gb|EMB43687.1| 50S ribosomal protein L25 [Treponema denticola ASLM]
gi|448965602|gb|EMB46263.1| 50S ribosomal protein L25 [Treponema denticola AL-2]
gi|451702350|gb|EMD56772.1| 50S ribosomal protein L25 [Treponema denticola US-Trep]
Length = 211
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER G + + +R+ G++P ++Y + V I ++ + L K S+I+ L
Sbjct: 8 ANERSTYGKNAAVKMRRAGRIPAVMYDRHGKSVPIDVDERE-FMKLFKLVTESTIVTLNA 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK V +++FQ + H DF V+ K + KV + E SP + I+
Sbjct: 67 AGKDYEVFIKDFQHDIVSDKIKHIDFYEVERGKTLRTKVKIRL---EGSPEGVRHGGILE 123
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
I++L + CLPK+LP I +++ ++VN S+H+ DIKLP V+V+ T +D T+A
Sbjct: 124 TGITELELECLPKDLPARIIVDVSALDVNQSLHVRDIKLPEAVTVL--TSDDITVAA 178
>gi|296122874|ref|YP_003630652.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces
limnophilus DSM 3776]
gi|296015214|gb|ADG68453.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces
limnophilus DSM 3776]
Length = 216
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ +R+K GT+ +R LR G VPGI+YG ++P + ++ +I+ + +++
Sbjct: 6 KVSVKKRQKLGTAETRRLRLSGLVPGIVYGHQQEPQPVVVDETLIHPIV---VSGHKVVD 62
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L++ G +E ++R+ Q+ + +L+ H DF RVD +++ V V + + +P + L+
Sbjct: 63 LDVEGVLEKAIIRDVQVDPFTRLIQHIDFMRVDPNERVTVDVAIELKGT--APGI-LSGG 119
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
++ + + + + CL +P I + + +++ IH++++++P GV H + I
Sbjct: 120 MLEHQLHSIKVDCLAYQIPDSIVVKVSDLQLGGVIHVNELEIPPGV---HVQTQGELIVV 176
Query: 182 AIIPVNTLESD 192
++ V+T E D
Sbjct: 177 HVVKVSTRELD 187
>gi|409991823|ref|ZP_11275052.1| 50S ribosomal protein L25/general stress protein Ctc [Arthrospira
platensis str. Paraca]
gi|291572085|dbj|BAI94357.1| 50S ribosomal protein L25 [Arthrospira platensis NIES-39]
gi|409937317|gb|EKN78752.1| 50S ribosomal protein L25/general stress protein Ctc [Arthrospira
platensis str. Paraca]
Length = 201
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSI 59
M+I +K+ S R LR+ G +P ++YG + +++++ + +KK + ++
Sbjct: 1 MEITVKCQKRPSGSKPRALRREGLIPAVLYGHKGAESEELTIDAKTAENLMKKGAVNHTL 60
Query: 60 LNLEI-----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
+ L I GK LLR Q H +K H F + T + + V +PL+FI +
Sbjct: 61 IQLNIPDLSWAGKA---LLREVQTHPWKGFPYHLSFFSIGTLESVEVTIPLNFIGEPM-- 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
VK + ++ VI+++ ++C P N+P+ I++ + +EV ++H+ ++KLP GV VI E
Sbjct: 116 GVKNSGGMLDLVITEVQVNCKPGNIPEAIDVEVSALEVGDALHIHELKLPEGVEVI--AE 173
Query: 175 EDPTIAT 181
D +A+
Sbjct: 174 ADQVVAS 180
>gi|383791064|ref|YP_005475638.1| 50S ribosomal protein L25 [Spirochaeta africana DSM 8902]
gi|383107598|gb|AFG37931.1| ribosomal protein L25, Ctc-form [Spirochaeta africana DSM 8902]
Length = 201
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I+A +R + G + LR G++P ++YG + D +SM+ K + S+ILNL
Sbjct: 5 IVAEKRTEVGKGPNNRLRAAGRIPAVVYG-HDDAFSVSMDERDFMREFKVVS-ESTILNL 62
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ + VL++++Q VLH DF V+ KK+ V LH + + P I
Sbjct: 63 KVGKEKRDVLIKDYQEDVITGRVLHVDFYEVEAGKKLRTHVALHLVGT---PNEVREGGI 119
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ N + ++ I CLPK+L + I+I +E + ++H+ DI P G+ ++ T D +A
Sbjct: 120 LENPLHEVEIECLPKDLVEAIDIPIENLTSAHALHVGDITPPTGIRIV--TNSDAVVAAV 177
Query: 183 I 183
+
Sbjct: 178 V 178
>gi|148654602|ref|YP_001274807.1| 50S ribosomal protein L25/general stress protein Ctc [Roseiflexus
sp. RS-1]
gi|226736358|sp|A5UQF4.1|RL25_ROSS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148566712|gb|ABQ88857.1| LSU ribosomal protein L25P [Roseiflexus sp. RS-1]
Length = 218
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 87/161 (54%), Gaps = 5/161 (3%)
Query: 17 RNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELV-LLRN 75
+ LR+ G +P +YG +P+ + ++ + A+ ++ +S++ L I G L +
Sbjct: 20 KRLRRSGILPATVYGKGIEPIAVQIDARS-FQAIYRQAGRTSLIELHIAGHPPLAAFIHA 78
Query: 76 FQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCL 135
Q H + ++HADF+ VD +++ V VPLH SP V+ +++ V+S + I L
Sbjct: 79 LQRHPVTRDIIHADFRAVDLRQEVEVAVPLHIEGK--SPLVESGEAVLNQVLSTIEIRAL 136
Query: 136 PKNLPKFIEINLEKME-VNTSIHLSDIKLPRGVSVIHSTEE 175
P +P I +++ ++ + SIH D+ LP GV+++ EE
Sbjct: 137 PTAIPAHITVDISALDSFDKSIHARDLMLPPGVTLVTPGEE 177
>gi|39995768|ref|NP_951719.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter
sulfurreducens PCA]
gi|409911212|ref|YP_006889677.1| 50S ribosomal protein L25 [Geobacter sulfurreducens KN400]
gi|71153144|sp|Q74FE7.1|RL25_GEOSL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|39982532|gb|AAR33992.1| ribosomal protein L25 [Geobacter sulfurreducens PCA]
gi|298504778|gb|ADI83501.1| ribosomal protein L25 [Geobacter sulfurreducens KN400]
Length = 194
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+K G +R LR VPG++YG +PV + + + + E +S++ L G
Sbjct: 11 REKNGKGVARKLRAQDVVPGVVYGKGIEPVSVKVAAKDLAATIAGEGGLNSLITLSGGGS 70
Query: 68 VE--LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
+ +V++ + Q + K +LH DF R+ ++K+ V VPL + + + VK ++
Sbjct: 71 LNGNIVIVADMQRNPLKGDILHVDFHRISLDEKVKVHVPLVMVGT--AAGVK-EGGMLDV 127
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
V L + CLP +P+ I +++ + + SIH+S++ LP G+ V++ E
Sbjct: 128 VTYSLDVECLPTAIPEAINVDVTNLAIGHSIHVSELVLPAGIKVLNDPE 176
>gi|332188364|ref|ZP_08390089.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17]
gi|332011593|gb|EGI53673.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17]
Length = 205
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ + A R + G SR+LR+ G+VP +IYG NK I + + AL F +S++
Sbjct: 5 LTLAAETRDQVGKGASRSLRREGRVPAVIYGQNKAAASIHLEEKALVKALMTGHFFTSVI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++ + L ++ H LH DF R+ + + V VP+ F + + S +K
Sbjct: 65 MVD----GQRTLAKDVAFHPVTDRPLHVDFLRIGEHETVTVAVPVVFTDEDESRGIKQGG 120
Query: 121 CIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
+ NV ++ I ++P I I+L+ +EV SIH+SD+KLP+G +
Sbjct: 121 VL--NVTRHEIEIVVDAADIPAEITISLKGLEVGDSIHISDVKLPKGAT 167
>gi|408829562|ref|ZP_11214452.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
somaliensis DSM 40738]
Length = 193
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+KI A R + G +R +R+ GKVPG++YG +PV +++ + + ALK +++L
Sbjct: 4 VKIAAETRSEFGKGAARRVRRDGKVPGVLYGHGAEPVHLTLPGHDLMMALKTS---NALL 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
LE GK EL + + Q K + H D V+ +++ V++P+H E++P
Sbjct: 61 ALEFDGKTELAIPKAVQRDPLKGFIEHVDLLLVNRGEQVTVEIPVH-TEGELAP----GG 115
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++ +V++ L + ++P+ + +++E +E S+ D+ LP+GV++
Sbjct: 116 NLLEHVLNALPVEAEATHIPESLTVSVEGLEAGASVLAKDVPLPKGVTL 164
>gi|443635056|ref|ZP_21119226.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
gi|443345109|gb|ELS59176.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
Length = 205
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 6/183 (3%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A ER S RN+R G VPGIIYG + +S++ + L+ E ++++ L
Sbjct: 4 ITAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEG-KNTVITL 62
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ G+ V++ + Q K + HADFQ V+ + I V+VP+H I VK N +
Sbjct: 63 DVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAI--GVK-NGGV 119
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ + L + PK +P+ IE ++ K++VN + ++D LP G + E D +A+
Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISKLDVNEVLTIAD--LPAGSDYSFNHESDEVVASI 177
Query: 183 IIP 185
+ P
Sbjct: 178 LPP 180
>gi|251772227|gb|EES52797.1| Ribosomal protein L25 [Leptospirillum ferrodiazotrophum]
Length = 191
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG- 66
R G +R LR+ G VP ++YG K +S + A++ + + +LEI G
Sbjct: 11 RDSTGKGVARTLRRSGHVPAVVYGSGK-AQSLSALLKDVEKAIQGHAGRNGLFDLEISGG 69
Query: 67 ---KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ L L+R+ Q +LH DF V + ++ +VP+ I S SP I+
Sbjct: 70 NSSRTALTLVRDIQRDPITGKILHVDFLEVSEKARVKNRVPVEVIGS--SPEGVKKGGIL 127
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP-TIATA 182
V +L++ CL +P I+++ +++N ++HL D+ LP GV+V+ +DP T+
Sbjct: 128 DVVHRELHVECLSFQMPDHIQVDASALDINQTLHLRDVTLPPGVTVL----DDPNTVILH 183
Query: 183 IIP 185
+IP
Sbjct: 184 VIP 186
>gi|348176913|ref|ZP_08883807.1| 50S ribosomal protein L25 [Saccharopolyspora spinosa NRRL 18395]
Length = 200
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
++I +R + G +R R+ GK+P ++YG DP +S+ A++ E H+++L
Sbjct: 4 VRIAVEQRTEFGKGAARRTRRAGKIPAVLYGHGADPKHLSLPSVEFARAIR-ENGHNAVL 62
Query: 61 NLEIYGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L++ G EL L + H K + H D V +K+ V VP+ ++ E P
Sbjct: 63 TLDVSGSDSELALTKTITTHPIKNYIEHVDLLLVKRGEKVTVAVPV-VLSGEAGPG---- 117
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP 177
++S I+D+ I ++P+ +E+++ E+ T H SDI+LP GV++ + DP
Sbjct: 118 -GLVSQEITDVEIETEALHIPEQLELSIAGAEIGTQFHASDIQLPAGVTL----QSDP 170
>gi|329890236|ref|ZP_08268579.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568]
gi|328845537|gb|EGF95101.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568]
Length = 205
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ GT +R R+ G VPG++YGG+K PV IS+N +L ++ L+ YGK
Sbjct: 11 RENVGTGGARAARREGAVPGVLYGGDKAPVAISVNEREFRKSLYTGKLIGHLVTLK-YGK 69
Query: 68 -VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ V+ ++ Q LH D RV +++I +++P+ F+N++ +P + ++ V
Sbjct: 70 ETQPVIAKDIQFDPVSDRPLHFDLMRVGAKEEIKIEIPVAFVNADEAPYTR-QGGMLEVV 128
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
+ I +P + ++L+ E+ +I +SDI+LP G +
Sbjct: 129 RHTVEIMVRADRIPAELVVDLKGREIGENIRISDIQLPEGAA 170
>gi|452956510|gb|EME61901.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodococcus
ruber BKS 20-38]
Length = 201
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 95/178 (53%), Gaps = 11/178 (6%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
++ A R + G +R R+ G+VP ++YG DP +S+ + A+ + +++L
Sbjct: 6 RLAAVVRTEFGKGAARRARRDGQVPAVLYGHGTDPKHLSLPARE-FAAVLRAHGTNAVLT 64
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
LE+ G EL L ++ +H + + HAD V +K+ V+VPL + E + +
Sbjct: 65 LEVDGSEELALTKSVVVHPIRNYIEHADLLVVKKGEKVTVEVPL-VVTGEAA-----SGT 118
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ N IS + + NLP+ IE+++E E T I +D++LP+G ++ ++DP +
Sbjct: 119 LVVNEISTVKLEADALNLPEQIEVSIEDAEAGTQITAADVQLPKGATL----QDDPEL 172
>gi|385800630|ref|YP_005837034.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
praevalens DSM 2228]
gi|309389994|gb|ADO77874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
praevalens DSM 2228]
Length = 222
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 6/179 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G +R +R+ G +PG++YG DP I ++ I L E G+
Sbjct: 11 RTETGKGAARTIRRDGLIPGVVYGRGNDPRSIKVDPLDIEKLLHSNAIFDLTFVGEDGGE 70
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E V+++++Q K+ +LH DFQ + ++KI V VP+ + V+ N ++ ++
Sbjct: 71 DEATVIIKDYQKDVIKQNLLHVDFQFISMDEKITVSVPMRLEGDAL--GVR-NGGVLQHL 127
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
+ ++ I LP +P+ I I++ ++EV S+ ++D++L G+ ++ TE D I T + P
Sbjct: 128 LREIEIDALPAEIPEEITIDISELEVGESLAVADLELSEGLDLV--TESDEVIVTVVTP 184
>gi|282853609|ref|ZP_06262946.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J139]
gi|386071073|ref|YP_005985969.1| ribosomal L25P family protein [Propionibacterium acnes ATCC 11828]
gi|422390011|ref|ZP_16470108.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL103PA1]
gi|422458337|ref|ZP_16534991.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA2]
gi|422464038|ref|ZP_16540651.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL060PA1]
gi|422465324|ref|ZP_16541927.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA4]
gi|422468926|ref|ZP_16545457.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA3]
gi|422566348|ref|ZP_16641987.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA2]
gi|422577150|ref|ZP_16652687.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL001PA1]
gi|282583062|gb|EFB88442.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J139]
gi|314922165|gb|EFS85996.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL001PA1]
gi|314965248|gb|EFT09347.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA2]
gi|314982385|gb|EFT26478.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA3]
gi|315092574|gb|EFT64550.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA4]
gi|315094008|gb|EFT65984.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL060PA1]
gi|315104560|gb|EFT76536.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA2]
gi|327329538|gb|EGE71298.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL103PA1]
gi|353455439|gb|AER05958.1| ribosomal L25P family protein [Propionibacterium acnes ATCC 11828]
Length = 200
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R + G +R +R+ KVP ++YG + DP+ ++++ + AL+ E + +L++EI
Sbjct: 9 AEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTE---NPLLSIEI 65
Query: 65 YG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G K L L ++ Q K V H D V +K+ V V L I E +P I
Sbjct: 66 EGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALR-ITGESAPG-----TIA 119
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+++ + N+P+ IEI++ +E T+I+L D+KLP G S++ E+ AT
Sbjct: 120 MTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAED--VAATVA 177
Query: 184 IP----VNTLESDNNSSIEKEKN 202
P V ES ++ E EK
Sbjct: 178 FPETESVEDEESGEDAEGEAEKE 200
>gi|162146757|ref|YP_001601216.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter diazotrophicus PAl 5]
gi|209543256|ref|YP_002275485.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter diazotrophicus PAl 5]
gi|189042360|sp|A9HC01.1|RL25_GLUDA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161785332|emb|CAP54878.1| 50S ribosomal protein L25 [Gluconacetobacter diazotrophicus PAl 5]
gi|209530933|gb|ACI50870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Gluconacetobacter diazotrophicus PAl 5]
Length = 206
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 20 RKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLH 79
R+ G+VP +IYG ++P ++++ ++ +++ + S + ++ + G L+R QLH
Sbjct: 24 RRDGQVPAVIYGAKQEPTLVALDPRLVVREMQRGGWRSRVYDVTVDGASSPALMREIQLH 83
Query: 80 AYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNL 139
+H DFQR+ +++HV+V + F + SP +K +++ V + +S P N+
Sbjct: 84 PVSDKPIHVDFQRLAAGERVHVEVRIVFTGEDKSPGIK-RGGVLNIVRHTVEVSADPANI 142
Query: 140 PKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP--TIATAIIP 185
P+ ++L +++++ ++ D++ G + T + P IAT P
Sbjct: 143 PESFTVDLSQLDIHDNVRWDDLQ---GTGSVTPTLQIPNFVIATVAAP 187
>gi|227497783|ref|ZP_03927969.1| 50S ribosomal protein L25 [Actinomyces urogenitalis DSM 15434]
gi|226832783|gb|EEH65166.1| 50S ribosomal protein L25 [Actinomyces urogenitalis DSM 15434]
Length = 207
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 8/170 (4%)
Query: 7 ERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
+R G +R R+ G+VP ++YG +P + + AL+ ++++ L + G
Sbjct: 12 DRTNFGKGSARQARRNGQVPVVVYGHGTEPRHFLLEEHATRLALRGN--ENALVELAVDG 69
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
+ LVL ++ Q H + V H DFQ V+ +++ V+VP+ I ++ + +
Sbjct: 70 ETILVLTKDVQRHPIRPGVQHVDFQLVNRNERVEVEVPVTVIGEPVASTIHMVEA----- 124
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ L +S ++P+ IEI++ +E T+I +SDI LP GV + EED
Sbjct: 125 -AHLLVSAPVISIPEAIEIDITGVEAGTTIRVSDITLPEGVEAVTDAEED 173
>gi|67458744|ref|YP_246368.1| 50S ribosomal protein L25 [Rickettsia felis URRWXCal2]
gi|75536799|sp|Q4UMK5.1|RL25_RICFE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|67004277|gb|AAY61203.1| 50S ribosomal protein L25 [Rickettsia felis URRWXCal2]
Length = 203
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 6/184 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R + GT SR LR+ G+VP IIYG K PV IS+ I +K F S ++
Sbjct: 5 LELEAKSRTEFGTGASRALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
NL I K VL + +LH +V H DF ++ EK ++VP+ + E + VK
Sbjct: 65 NLTIDKKKYKVLPKAVELHPVTDIVRHVDFVFLE-EKTQKMEVPVVYEGKERALGVKRGG 123
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
N++ + + C N+P+ + I++ M + TS+ S I+LP+G S +T+++ +
Sbjct: 124 YF--NIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCS--FTTKKEFVL 179
Query: 180 ATAI 183
AT I
Sbjct: 180 ATII 183
>gi|389693984|ref|ZP_10182078.1| ribosomal protein L25, Ctc-form [Microvirga sp. WSM3557]
gi|388587370|gb|EIM27663.1| ribosomal protein L25, Ctc-form [Microvirga sp. WSM3557]
Length = 205
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R + G +R +R+ G+VP +IYG + I+++ N + F ++I
Sbjct: 6 QIKAVARDRSGKGAARAVRRQGQVPAVIYGAGQAAQAIALDFNQTKQLIFAGHFLTTIFE 65
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+++ G+ + R++QL + +H DF RV + I V VP+H + E SP VK
Sbjct: 66 IDVNGQTVRAIPRDYQLDPVRDFPIHVDFLRVSAGQTIKVVVPVHVVGQEKSPGVKRGGT 125
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+ V + ++ P +P +IE ++E +++ +S+HL DIKLP G ++ E+ T+ T
Sbjct: 126 -LQVVEHTVELAVSPDAIPDYIEASVEGLDIGSSVHLEDIKLPNGAKA--TSTENLTLVT 182
Query: 182 AIIPVN 187
+ P
Sbjct: 183 VVAPTG 188
>gi|310815223|ref|YP_003963187.1| 50S ribosomal protein L25 [Ketogulonicigenium vulgare Y25]
gi|385232765|ref|YP_005794107.1| 50S ribosomal protein L25 [Ketogulonicigenium vulgare WSH-001]
gi|308753958|gb|ADO41887.1| 50S ribosomal protein L25/general stress protein Ctc
[Ketogulonicigenium vulgare Y25]
gi|343461676|gb|AEM40111.1| 50S ribosomal protein L25 [Ketogulonicigenium vulgare WSH-001]
Length = 155
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Query: 41 MNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIH 100
M+ N++ L++ F S++++L + GK E V+ R Q H K L H DF R+ ++
Sbjct: 1 MSFNVLLKTLRQGGFLSTLIDLNVDGKTERVVCRGVQRHVVKDLPTHVDFLRLAPTTRVK 60
Query: 101 VKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSD 160
+ +P+HF N +P VKL ++ +V S++ + ++P+F+ ++L ++ IH+ D
Sbjct: 61 LHIPVHFENEAAAPGVKLGGTVV-HVRSEIELEVTANDIPEFVTVDLTGRKIGDVIHIQD 119
Query: 161 IKLPRG 166
+ LP+G
Sbjct: 120 VTLPKG 125
>gi|254456302|ref|ZP_05069731.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083304|gb|EDZ60730.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp.
HTCC7211]
Length = 232
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 19 LRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQL 78
LR G VP IIYGG KIS++ ++ ++KE F S+I+ L + GK + VL + +
Sbjct: 20 LRNNGNVPAIIYGGEAQNEKISISKKLLKSLIEKENFLSNIVTLNVDGKSQNVLPKEIKY 79
Query: 79 HAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKN 138
H +H DF RV KI ++VP+ FIN E SP +K +++ V + + C +
Sbjct: 80 HIISDEPIHVDFLRVVPGLKIKIEVPVQFINHEKSPGLK-RGGVLNIVRRKVELRCPSEK 138
Query: 139 LPKFIEINLEKMEVNTSIHLSDIKLP-------RGVSVIHSTEEDPTI 179
+P+ + I+L+ +++ S +S IKL RG + +T PT+
Sbjct: 139 IPESLVIDLDGIDIGESFKISSIKLETDVEPTIRGRDFVIATLAAPTV 186
>gi|379022730|ref|YP_005299391.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. CA410]
gi|376323668|gb|AFB20909.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. CA410]
Length = 204
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R + GT +R LR+ G+VP IIYG K PV IS+ I +K F S ++
Sbjct: 5 LELEAQSRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
NL I K VL + +LH +V H DF ++ EKK ++VP+ + E + VK
Sbjct: 65 NLTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLE-EKKQKMEVPVVYEGKERALGVKRGG 123
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
N++ + + C N+P+ + I++ M + TS++ S I LP+G S E
Sbjct: 124 YF--NIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLNSSKIVLPKGCSFASKKE 176
>gi|157803533|ref|YP_001492082.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. McKiel]
gi|166223714|sp|A8EY64.1|RL25_RICCK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157784796|gb|ABV73297.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. McKiel]
Length = 204
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R + GT +R LR+ G+VP IIYG K PV IS+ I +K F S ++
Sbjct: 5 LELEAQSRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKEITKYYRKPAFISQLI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
NL I K VL + +LH +V H DF ++ EKK ++VP+ + E + VK
Sbjct: 65 NLTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLE-EKKQKMEVPVVYEGKERALGVKRGG 123
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
N++ + + C N+P+ + I++ M + TS++ S I LP+G S E
Sbjct: 124 YF--NIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLNSSKIVLPKGCSFASKKE 176
>gi|453052703|gb|EMF00181.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 212
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 93/170 (54%), Gaps = 9/170 (5%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ A R G +R +R+ KVPG+IYG DP ++++ + + ALK +L
Sbjct: 4 VKLAAETRTDFGKGAARRIRRDDKVPGVIYGHGADPKHVTLDGHALMMALKTPNV---LL 60
Query: 61 NLEIYGK-VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L++ GK ELV+ + Q K ++HADF V +K+ V+VP+H E++P
Sbjct: 61 RLDLGGKGGELVIPKEVQRDPLKGFLVHADFLAVKKGEKVTVEVPVH-TEGELAP----G 115
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++ ++++ L + ++P+ + +++E +E ++ D+ LPRG ++
Sbjct: 116 GNLLEHMLNALPVEAEATHIPEGLTVSIEGLEAGHTVRAGDVPLPRGTTL 165
>gi|91205677|ref|YP_538032.1| 50S ribosomal protein L25 [Rickettsia bellii RML369-C]
gi|157826865|ref|YP_001495929.1| 50S ribosomal protein L25 [Rickettsia bellii OSU 85-389]
gi|109893391|sp|Q1RI71.1|RL25_RICBR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223713|sp|A8GVL5.1|RL25_RICB8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91069221|gb|ABE04943.1| 50S ribosomal protein L25 [Rickettsia bellii RML369-C]
gi|157802169|gb|ABV78892.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
bellii OSU 85-389]
Length = 202
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R + GT +R LR+ G+VP IIYG K PV IS+ I +K F S ++
Sbjct: 5 LELEAKSRNEFGTGAARALRREGRVPAIIYGAKKTPVSISLEEKEITKYYRKPAFISQLI 64
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
NL I G VL + +LH +V H DF ++ +K ++VP+ + E + VK
Sbjct: 65 NLTIEGTQYKVLPKAVELHPVTDIVRHVDFVFLE-DKTQKMEVPVVYEGKERALGVKRGG 123
Query: 121 CIISNVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
N++ + + C N+P+ + I++ M + TS+ S +KLP G S +T+++ +
Sbjct: 124 YF--NIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKVKLPEGCS--FTTKKEFVL 179
Query: 180 ATAI 183
AT I
Sbjct: 180 ATII 183
>gi|71082803|ref|YP_265522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Pelagibacter ubique HTCC1062]
gi|109893377|sp|Q4FPH0.1|RL25_PELUB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71061916|gb|AAZ20919.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Pelagibacter ubique HTCC1062]
Length = 228
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K R+LR G +PGIIYGG K+++ + + K +F S+I+ L +
Sbjct: 6 ANTRNTKSKGDVRSLRSAGNIPGIIYGGPDQNQKVTVLKKTLKSLIDKGSFLSNIITLNL 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK + VL R + H DF RV KI ++VP+ FIN E SP +K +++
Sbjct: 66 DGKPQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLK-RGGVLN 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
V + + C + +P I I+L+ +++ S +S +KL GV+
Sbjct: 125 IVRRKIELKCPSEKIPSAITIDLDGVDIGESFKISSVKLEEGVT 168
>gi|389571466|ref|ZP_10161561.1| ribosomal protein L25, Ctc-form [Bacillus sp. M 2-6]
gi|388428866|gb|EIL86656.1| ribosomal protein L25, Ctc-form [Bacillus sp. M 2-6]
Length = 208
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 102/186 (54%), Gaps = 11/186 (5%)
Query: 4 IAFERKKKGTSFSRN-LRKI---GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
+A + K T F R+ L+KI G VPG+IYG N D + +S++ + L+ E ++I
Sbjct: 1 MATLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDEG-KNTI 59
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ L++ G+ + V++ Q K ++HADFQ VD +++I VP+ I S VK +
Sbjct: 60 ITLDVGGETKSVMVTELQTDPLKNELVHADFQVVDLQREIDADVPVQLIGE--SKGVK-D 116
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ + +L I+ PK++P+ IE ++ +EVN + + D+ + + + EE +
Sbjct: 117 GGVLQQPLFELSITAKPKDIPQNIEADITNLEVNDVLTVGDLSVQSTYQINNDPEE---V 173
Query: 180 ATAIIP 185
+I+P
Sbjct: 174 VASILP 179
>gi|417932607|ref|ZP_12575945.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes
SK182B-JCVI]
gi|340774243|gb|EGR96730.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes
SK182B-JCVI]
Length = 205
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R + G +R +R+ KVP ++YG + DP+ +++ + AL+ E + +L++EI
Sbjct: 9 AEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLEGHATLLALRTE---NPLLSIEI 65
Query: 65 YG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G K L L ++ Q K V H D V +K+ V V L + A+ +
Sbjct: 66 EGQKPILALPKDVQRDVLKGFVRHVDLLSVRRGEKVDVNVALRIVGESAPGAIAMTEFNE 125
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
V +DL N+P+ IEI++ +E T+I+L D+KLP G S++ E+ AT
Sbjct: 126 IEVQADLL------NIPEAIEIDVTDLEAGTTIYLGDLKLPEGTSLLGDAED--VAATVA 177
Query: 184 IPVNTLESDNNSSIEKEKNNN 204
P D S E + +
Sbjct: 178 FPETEPVEDEGSEGEDAEGES 198
>gi|406669187|ref|ZP_11076467.1| ribosomal protein L25, Ctc-form [Facklamia ignava CCUG 37419]
gi|405583984|gb|EKB57910.1| ribosomal protein L25, Ctc-form [Facklamia ignava CCUG 37419]
Length = 206
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
M + A R + GT +R R+ G +P +YG + + V + +N + AL K +++
Sbjct: 1 MSLKAELRTQTGTGAARKARREGMIPVSLYGKDTEAVSLLINRRE-FEALLKAEGTNAVF 59
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
++E GK + V+L +++ A K V D + ++K+ V+VPLH +N + +VK+
Sbjct: 60 DVEYDGKTQKVILHDYERAALKDEVYSVDLNAISADQKLQVEVPLHAVNVD---SVKVG- 115
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
I+ VI+D+ + P ++P EI++E ME+ + ++D+ GV V+ EE
Sbjct: 116 -IVEVVINDILVETKPDSIPSHFEIDVEGMEIGDTKTVADLDKHAGVEVLLDPEE 169
>gi|218660335|ref|ZP_03516265.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli IE4771]
Length = 152
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 80/136 (58%), Gaps = 3/136 (2%)
Query: 55 FHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
F +++ +E+ GK VL +++QL + +H DF RV ++ V++P+HFIN E S
Sbjct: 10 FMTTVATIEVDGKKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQ 69
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
+K+ +++ V + + C +P+F +I+L ++ SIH+S++ LP+GV+ + +
Sbjct: 70 GLKVGG-VLNIVRHSVEVHCPADAIPEFFDIDLSGKKIGDSIHISEVTLPKGVTTV--ID 126
Query: 175 EDPTIATAIIPVNTLE 190
D TIAT + P ++
Sbjct: 127 RDFTIATIVAPAAGVD 142
>gi|334119848|ref|ZP_08493932.1| 50S ribosomal protein L25 [Microcoleus vaginatus FGP-2]
gi|333457489|gb|EGK86112.1| 50S ribosomal protein L25 [Microcoleus vaginatus FGP-2]
Length = 201
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 98/187 (52%), Gaps = 14/187 (7%)
Query: 4 IAFERKKKGTSFSRN-LRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSILN 61
+A E +K+ N LR+ G +P ++YG + + +++ + H LKK ++++++
Sbjct: 3 LAVECQKRAEGSKPNALRRSGLIPAVLYGHKGSESISLTIKAKTVEHLLKKHVVNNALID 62
Query: 62 LEI-----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAV 116
L I GK LLR Q+H +K H F V T+ + V++ L F+ + V
Sbjct: 63 LSIPDLSWSGKT---LLREVQVHPWKGYPYHLSFFSVATQDSLEVELSLRFVGEPV--GV 117
Query: 117 KLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
KL I+ V++ L + C P ++P+ IE+++ ++V ++H+ ++ LP GV + E D
Sbjct: 118 KLEGGILDTVLTQLAVKCKPDSIPEAIEVDISNLKVGDAVHIHELVLPEGVVAL--GEPD 175
Query: 177 PTIATAI 183
+ T +
Sbjct: 176 QVVVTVL 182
>gi|50842019|ref|YP_055246.1| ribosomal L25P family protein [Propionibacterium acnes KPA171202]
gi|50839621|gb|AAT82288.1| ribosomal L25P family protein [Propionibacterium acnes KPA171202]
Length = 229
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R + G +R +R+ KVP ++YG + DP+ ++++ + AL+ E + +L++EI
Sbjct: 33 AEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTE---NPLLSIEI 89
Query: 65 YG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G K L L ++ Q K V H D V +K+ V V L I E +P I
Sbjct: 90 EGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALR-ITGESAPG-----TIA 143
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+++ + N+P+ IEI++ +E T+I+L D+KLP G S++ E+ AT
Sbjct: 144 MTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAED--VAATVA 201
Query: 184 IPVNTLESDNNSSIEKEKNNN 204
P D S+ E + +
Sbjct: 202 FPETEPVEDEESAGEDAQGES 222
>gi|320104416|ref|YP_004180007.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Isosphaera
pallida ATCC 43644]
gi|319751698|gb|ADV63458.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Isosphaera
pallida ATCC 43644]
Length = 202
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 9 KKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKV 68
K GT +R LR+ G +P IIYG + + I + H+ ++ +K+++ ++L + GK
Sbjct: 18 KGTGTRVARKLRQQGLIPAIIYGHKEPNLPIVLKHDDVWRIIKQQSHR---VDLVVAGKT 74
Query: 69 ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS 128
E VL+R+ Q + ++H DF RV E+ + V L F +PA ++ +
Sbjct: 75 EEVLVRHVQWDHLSRDIIHLDFYRVSPEETVESIVRLEFKG---TPAGVAAGGLLETPVH 131
Query: 129 DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+L + C ++P I ++L +E+ S++ D+ LP GV
Sbjct: 132 ELKVDCRADSIPDLIAVDLSGLELGQSLYARDVPLPAGV 170
>gi|345304242|ref|YP_004826144.1| 50S ribosomal protein L25 [Rhodothermus marinus SG0.5JP17-172]
gi|345113475|gb|AEN74307.1| 50S ribosomal protein L25 [Rhodothermus marinus SG0.5JP17-172]
Length = 202
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Query: 1 MKIIAFERKKK--GTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHN----MIYHALKKET 54
M I E K + G +R +R+ G VP I+YG + +P+ M + +IY T
Sbjct: 1 MATITIEAKPRETGKRAARAIRREGWVPCILYGHHVEPIPFQMLESKLRPLIY------T 54
Query: 55 FHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
+ ++ L++ GK +L++ + H LHADFQ + E+K+ V VP+ + + +
Sbjct: 55 TETHLVKLQLNGKTWDCILKDVEFHPVTDRPLHADFQVLRAEEKVTVTVPVQIVGTAVG- 113
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKL 163
++ V +L ++CLPK++P I+I++ +++ +IH+ D++
Sbjct: 114 --VQRGGVLQIVTRELEVTCLPKDIPAHIDIDVSNLDIGDAIHVGDLQF 160
>gi|268317962|ref|YP_003291681.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus
marinus DSM 4252]
gi|262335496|gb|ACY49293.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus
marinus DSM 4252]
Length = 202
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Query: 1 MKIIAFERKKK--GTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHN----MIYHALKKET 54
M I E K + G +R +R+ G VP I+YG + +P+ M + +IY T
Sbjct: 1 MATITIEAKPRETGKRAARAIRREGWVPCILYGHHVEPIPFQMLESKLRPLIY------T 54
Query: 55 FHSSILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
+ ++ L++ GK +L++ + H LHADFQ + E+K+ V VP+ + + I
Sbjct: 55 TETHLVKLQLNGKTWDCILKDVEFHPVTDRPLHADFQVLRAEEKVTVTVPVQIVGTAIG- 113
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKL 163
++ V +L ++CLPK++P I+I++ +++ +IH+ D++
Sbjct: 114 --VQRGGVLQIVTHELEVTCLPKDIPAHIDIDVSNLDIGDAIHVGDLQF 160
>gi|407979091|ref|ZP_11159913.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
HYC-10]
gi|407414307|gb|EKF35960.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
HYC-10]
Length = 208
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%), Gaps = 11/186 (5%)
Query: 4 IAFERKKKGTSFSRN-LRKI---GKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSI 59
+A + K T F R+ L+KI G VPG+IYG N D + +S++ + L+ E ++I
Sbjct: 1 MATLKANKRTDFKRSTLQKIRHSGHVPGVIYGKNTDNLAVSLDSIDLLKTLRDEG-KNTI 59
Query: 60 LNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+ L++ G+ + V++ Q K ++HADFQ VD +++I VP+ I S VK +
Sbjct: 60 ITLDVGGETKSVMVTELQTDPLKNELVHADFQVVDLQQEIEADVPVQLIGE--SKGVK-D 116
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ + +L I+ PK++P+ IE ++ +EVN + + D+ + + ++ EE +
Sbjct: 117 GGVLQQPLFELSITAKPKDIPQNIEADITNLEVNDVLTVGDLPVQSTYQINNNPEE---V 173
Query: 180 ATAIIP 185
+I+P
Sbjct: 174 VASILP 179
>gi|387886948|ref|YP_006317247.1| 50S ribosomal protein L25 [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871764|gb|AFJ43771.1| 50S ribosomal protein L25 [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 96
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ G+ SR LR+ GK+P +IYGG+K+ V I ++H+ + H+ + + F SS + LEI
Sbjct: 8 AVKREDSGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAFFSSEITLEI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRV 93
G+ E V+++ Q H YK ++HADF RV
Sbjct: 68 DGQEEKVIIKALQRHPYKVKLVHADFMRV 96
>gi|426400541|ref|YP_007019513.1| 50S ribosomal protein L25 [Candidatus Endolissoclinum patella L2]
gi|425857209|gb|AFX98245.1| ribosomal protein L25, Ctc-form [Candidatus Endolissoclinum patella
L2]
Length = 217
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G +R R+ G VP IIYG K P+ + + + L + F S ++ L++ +
Sbjct: 24 RERLGKGSARAARRQGFVPAIIYGEKKTPIAVQVLRRELDKILNRPGFFSRLIFLKVGTE 83
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL R+ Q H L + DF RV + V VP+ FIN ISP VK + NV+
Sbjct: 84 NYRVLPRDLQRHPVSDLPWNIDFLRVSASAVLTVAVPIEFINKNISPGVKSGGVL--NVM 141
Query: 128 S-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP-TIATAIIP 185
+ + C +N+P + I+L ++ SI++S I LP V H+ + TIAT + P
Sbjct: 142 RHSIEVYCQVENIPDKLTIDLSDAKLGESIYVSSISLPNNVK--HTINDRYFTIATIVPP 199
Query: 186 V 186
+
Sbjct: 200 I 200
>gi|289424136|ref|ZP_06425919.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK187]
gi|289428386|ref|ZP_06430072.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J165]
gi|295130101|ref|YP_003580764.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137]
gi|335052030|ref|ZP_08544930.1| ribosomal protein L25, Ctc-form [Propionibacterium sp. 409-HC1]
gi|335054810|ref|ZP_08547611.1| ribosomal protein L25, Ctc-form [Propionibacterium sp. 434-HC2]
gi|342213032|ref|ZP_08705757.1| ribosomal protein L25, Ctc-form [Propionibacterium sp. CC003-HC2]
gi|354606502|ref|ZP_09024473.1| 50S ribosomal protein L25, Ctc-form [Propionibacterium sp.
5_U_42AFAA]
gi|365962246|ref|YP_004943812.1| ribosomal L25P family protein [Propionibacterium acnes TypeIA2
P.acn31]
gi|365964490|ref|YP_004946055.1| ribosomal L25P family protein [Propionibacterium acnes TypeIA2
P.acn17]
gi|365973426|ref|YP_004954985.1| ribosomal L25P family protein [Propionibacterium acnes TypeIA2
P.acn33]
gi|386023486|ref|YP_005941789.1| 50S ribosomal protein L25 [Propionibacterium acnes 266]
gi|387502909|ref|YP_005944138.1| ribosomal L25P family protein [Propionibacterium acnes 6609]
gi|407934911|ref|YP_006850553.1| 50S ribosomal protein L25/general stress protein Ctc
[Propionibacterium acnes C1]
gi|417930964|ref|ZP_12574337.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK182]
gi|419420745|ref|ZP_13960974.1| ribosomal L25P family protein [Propionibacterium acnes PRP-38]
gi|422384531|ref|ZP_16464672.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA3]
gi|422387384|ref|ZP_16467501.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA2]
gi|422392186|ref|ZP_16472260.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL099PA1]
gi|422395230|ref|ZP_16475271.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL097PA1]
gi|422424812|ref|ZP_16501758.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA1]
gi|422427314|ref|ZP_16504232.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA1]
gi|422428854|ref|ZP_16505759.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA2]
gi|422431789|ref|ZP_16508659.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA2]
gi|422435203|ref|ZP_16512061.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA2]
gi|422442913|ref|ZP_16519716.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA1]
gi|422446713|ref|ZP_16523458.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA1]
gi|422449936|ref|ZP_16526653.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA2]
gi|422453346|ref|ZP_16530042.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA3]
gi|422456347|ref|ZP_16533011.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA1]
gi|422460343|ref|ZP_16536977.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL038PA1]
gi|422473842|ref|ZP_16550312.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL056PA1]
gi|422476860|ref|ZP_16553299.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL007PA1]
gi|422479769|ref|ZP_16556179.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA1]
gi|422484284|ref|ZP_16560663.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA2]
gi|422487532|ref|ZP_16563863.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA2]
gi|422488983|ref|ZP_16565310.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL020PA1]
gi|422491842|ref|ZP_16568153.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL086PA1]
gi|422494075|ref|ZP_16570370.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA1]
gi|422500525|ref|ZP_16576781.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA2]
gi|422504313|ref|ZP_16580550.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA2]
gi|422511636|ref|ZP_16587779.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA1]
gi|422514476|ref|ZP_16590597.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA2]
gi|422518267|ref|ZP_16594339.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL074PA1]
gi|422520916|ref|ZP_16596958.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL045PA1]
gi|422526406|ref|ZP_16602405.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA1]
gi|422528285|ref|ZP_16604267.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA1]
gi|422535417|ref|ZP_16611340.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA1]
gi|422535745|ref|ZP_16611653.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL078PA1]
gi|422538228|ref|ZP_16614102.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA1]
gi|422541013|ref|ZP_16616871.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA1]
gi|422546617|ref|ZP_16622444.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA3]
gi|422551046|ref|ZP_16626843.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA1]
gi|422553214|ref|ZP_16629001.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA3]
gi|422554542|ref|ZP_16630312.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA2]
gi|422557814|ref|ZP_16633557.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA2]
gi|422558929|ref|ZP_16634657.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA1]
gi|422562619|ref|ZP_16638297.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL046PA1]
gi|422570406|ref|ZP_16646001.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL067PA1]
gi|422578360|ref|ZP_16653889.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA4]
gi|68053104|sp|Q6AAC8.2|RL25_PROAC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|289154833|gb|EFD03515.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK187]
gi|289158358|gb|EFD06575.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes J165]
gi|291376922|gb|ADE00777.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK137]
gi|313765348|gb|EFS36712.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA1]
gi|313772663|gb|EFS38629.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL074PA1]
gi|313806689|gb|EFS45196.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA2]
gi|313810886|gb|EFS48600.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA1]
gi|313814603|gb|EFS52317.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA1]
gi|313815245|gb|EFS52959.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA1]
gi|313826760|gb|EFS64474.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA1]
gi|313828550|gb|EFS66264.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL063PA2]
gi|313832005|gb|EFS69719.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL007PA1]
gi|313834455|gb|EFS72169.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL056PA1]
gi|313840312|gb|EFS78026.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL086PA1]
gi|314916009|gb|EFS79840.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA4]
gi|314916914|gb|EFS80745.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA1]
gi|314921555|gb|EFS85386.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL050PA3]
gi|314931121|gb|EFS94952.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL067PA1]
gi|314954822|gb|EFS99228.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA1]
gi|314958988|gb|EFT03090.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL002PA1]
gi|314969389|gb|EFT13487.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA1]
gi|314974457|gb|EFT18552.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA1]
gi|314977353|gb|EFT21448.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL045PA1]
gi|314980491|gb|EFT24585.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA2]
gi|314985548|gb|EFT29640.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA1]
gi|314987504|gb|EFT31595.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA2]
gi|314989030|gb|EFT33121.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL005PA3]
gi|315081845|gb|EFT53821.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL078PA1]
gi|315082662|gb|EFT54638.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL027PA2]
gi|315087619|gb|EFT59595.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL072PA1]
gi|315097621|gb|EFT69597.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL038PA1]
gi|315099745|gb|EFT71721.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL059PA2]
gi|315101950|gb|EFT73926.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL046PA1]
gi|315106543|gb|EFT78519.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA1]
gi|315110331|gb|EFT82307.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL030PA2]
gi|327331620|gb|EGE73359.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA2]
gi|327333603|gb|EGE75323.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL096PA3]
gi|327335128|gb|EGE76839.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL097PA1]
gi|327445369|gb|EGE92023.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL013PA2]
gi|327446983|gb|EGE93637.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA1]
gi|327449980|gb|EGE96634.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL043PA2]
gi|327454824|gb|EGF01479.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA3]
gi|327455681|gb|EGF02336.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL083PA2]
gi|328755880|gb|EGF69496.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL087PA1]
gi|328756663|gb|EGF70279.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL025PA2]
gi|328758616|gb|EGF72232.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL020PA1]
gi|328761611|gb|EGF75127.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL099PA1]
gi|332674942|gb|AEE71758.1| 50S ribosomal protein L25 [Propionibacterium acnes 266]
gi|333763683|gb|EGL41122.1| ribosomal protein L25, Ctc-form [Propionibacterium sp. 434-HC2]
gi|333765204|gb|EGL42570.1| ribosomal protein L25, Ctc-form [Propionibacterium sp. 409-HC1]
gi|335276954|gb|AEH28859.1| ribosomal L25P family protein [Propionibacterium acnes 6609]
gi|340768576|gb|EGR91101.1| ribosomal protein L25, Ctc-form [Propionibacterium sp. CC003-HC2]
gi|340769287|gb|EGR91811.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes SK182]
gi|353557909|gb|EHC27277.1| 50S ribosomal protein L25, Ctc-form [Propionibacterium sp.
5_U_42AFAA]
gi|365738927|gb|AEW83129.1| ribosomal L25P family protein [Propionibacterium acnes TypeIA2
P.acn31]
gi|365741171|gb|AEW80865.1| ribosomal L25P family protein [Propionibacterium acnes TypeIA2
P.acn17]
gi|365743425|gb|AEW78622.1| ribosomal L25P family protein [Propionibacterium acnes TypeIA2
P.acn33]
gi|379979119|gb|EIA12443.1| ribosomal L25P family protein [Propionibacterium acnes PRP-38]
gi|407903492|gb|AFU40322.1| 50S ribosomal protein L25/general stress protein Ctc
[Propionibacterium acnes C1]
gi|456740117|gb|EMF64648.1| 50S ribosomal protein L25/general stress protein Ctc
[Propionibacterium acnes FZ1/2/0]
Length = 205
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R + G +R +R+ KVP ++YG + DP+ ++++ + AL+ E + +L++EI
Sbjct: 9 AEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTE---NPLLSIEI 65
Query: 65 YG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G K L L ++ Q K V H D V +K+ V V L I E +P I
Sbjct: 66 EGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALR-ITGESAPG-----TIA 119
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+++ + N+P+ IEI++ +E T+I+L D+KLP G S++ E+ AT
Sbjct: 120 MTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAED--VAATVA 177
Query: 184 IPVNTLESDNNSSIEKEKNNN 204
P D S+ E + +
Sbjct: 178 FPETEPVEDEESAGEDAQGES 198
>gi|422436552|ref|ZP_16513399.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL092PA1]
gi|422515698|ref|ZP_16591810.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA2]
gi|422523845|ref|ZP_16599857.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA2]
gi|422531206|ref|ZP_16607154.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA1]
gi|422543560|ref|ZP_16619400.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA1]
gi|313792871|gb|EFS40938.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA1]
gi|313802676|gb|EFS43898.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL110PA2]
gi|314964289|gb|EFT08389.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL082PA1]
gi|315078695|gb|EFT50726.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL053PA2]
gi|327456830|gb|EGF03485.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL092PA1]
Length = 205
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 12/201 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R + G +R++R+ KVP ++YG + DP+ ++++ + AL+ E + +L++EI
Sbjct: 9 AEQRTEFGKGAARHIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTE---NPLLSIEI 65
Query: 65 YG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G K L L ++ Q K V H D V +K+ V V L I E +P I
Sbjct: 66 EGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALR-ITGESAPG-----TIA 119
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+++ + N+P+ IEI++ +E T+I+L D+KLP G S++ E+ AT
Sbjct: 120 MTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAED--VAATVA 177
Query: 184 IPVNTLESDNNSSIEKEKNNN 204
P D S+ E + +
Sbjct: 178 FPETEPVEDEESAGEDAQGES 198
>gi|134297987|ref|YP_001111483.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum reducens MI-1]
gi|172044207|sp|A4J0Q5.1|RL25_DESRM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|134050687|gb|ABO48658.1| LSU ribosomal protein L25P [Desulfotomaculum reducens MI-1]
Length = 210
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
RK S + +R G +PG++YG + + IS++ + + L T ++++N+ I G
Sbjct: 11 RKTATKSIVKEIRNNGGIPGVVYGKHVGSMAISVDAKDLKNILGSVTGRNTLINMNINGS 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V++++ Q+ + + H DFQ+V KI +P+ + + A+ +I + +
Sbjct: 71 KQTVMVKSLQMDPMHQNIRHVDFQQVSENTKIRTVIPVQLVGTPKGVAM---GGVIQHDL 127
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI---HST 173
I CLP +P+ I++++ +E+ ++ +SD+ LP GV ++ H+T
Sbjct: 128 RSAEIECLPNRIPEAIQVDISGLEIGDTLSVSDLNLPPGVKILDHPHTT 176
>gi|422447400|ref|ZP_16524132.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA3]
gi|422481463|ref|ZP_16557862.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA1]
gi|422505013|ref|ZP_16581247.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA2]
gi|313821706|gb|EFS59420.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA1]
gi|313824403|gb|EFS62117.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA2]
gi|314926811|gb|EFS90642.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL036PA3]
Length = 205
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R + G +R +R+ KVP ++YG + DP+ ++++ + AL+ E + +L++EI
Sbjct: 9 AEQRTEFGKGAARRIRRDDKVPAVMYGHDHDPIHVTLDGHATLLALRTE---NPLLSIEI 65
Query: 65 YG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G K L L ++ Q K V H D V +K+ V V L I E +P I
Sbjct: 66 EGQKPMLALPKDVQRDVLKGFVRHVDLLTVRRGEKVDVNVALR-ITGESAPG-----TIA 119
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+++ + N+P+ IEI++ +E T+I+L D+KLP G S++ E+ AT
Sbjct: 120 MTEFNEIEVQADLLNIPEVIEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAED--VAATVA 177
Query: 184 IPVNTLESDNNSSIEKEKNNN 204
P D S+ E + +
Sbjct: 178 FPETEPVEDEESAGEDAQGES 198
>gi|158522828|ref|YP_001530698.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus
oleovorans Hxd3]
gi|226736308|sp|A8ZXZ4.1|RL25_DESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|158511654|gb|ABW68621.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus
oleovorans Hxd3]
Length = 217
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI--Y 65
R+ G + LR+ G VP I+YG DP+ ++++ + + L K+ ++L+L I
Sbjct: 11 RQMAGGPTPKALRRQGFVPAIVYGHKNDPLPLAVD-DHTFRLLLKDAGQQALLSLVIDDG 69
Query: 66 GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
+ V+L+ Q H ++HADF VD KKI VP+ + + K ++
Sbjct: 70 AASKTVMLKELQQHPVSLKLIHADFHEVDLTKKITTYVPV--ATTGVCKGEK-EGGVLQL 126
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
+ +L + CLP +P+ I I++ +++ S+H++DI+ P GV ++H
Sbjct: 127 IRRELEVRCLPGLIPESIAIDISALDIGDSVHVADIEAPEGVELVH 172
>gi|138893724|ref|YP_001124177.1| 50S ribosomal protein L25 [Geobacillus thermodenitrificans NG80-2]
gi|166223684|sp|A4IJC8.1|RL25_GEOTN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|134265237|gb|ABO65432.1| General stress protein [Geobacillus thermodenitrificans NG80-2]
Length = 210
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ERK K S R +R G +P ++YG D IS++ + AL++ HS ++ L++
Sbjct: 7 AKERKDKKHSTLRRIRSQGGIPAVLYGKKVDNKMISISAADLEKALREGGRHS-LVTLKV 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VLLR Q + +LHADFQ VD ++ V V + + +P VK + ++
Sbjct: 66 DGEDYSVLLREVQRDPLRGELLHADFQAVDMSAEVDVDVEVRLVGE--APGVK-DGGVLQ 122
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ +L I LP N+P IE+++ ++V I + D++ + H E IAT +
Sbjct: 123 QNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEINHEPSE--VIATILP 180
Query: 185 P 185
P
Sbjct: 181 P 181
>gi|452991193|emb|CCQ97533.1| 50S ribosomal protein L25 [Clostridium ultunense Esp]
Length = 220
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+KI R G + LR+ VPG++YG ++ I ++ + + + S+++
Sbjct: 4 IKIQVERRTGLGKNKVDKLRQGDFVPGVVYGKGEETEHIQVDRRS-FDKVYRSAGMSTLI 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+LE+ G + VL++ Q+H +K+ LH DFQ+++ ++ + + +P+ + E ++
Sbjct: 63 DLELDGNIAPVLIKEVQVHPFKRQYLHVDFQKLNMDETVKLTIPIILVGRE---NIEDKE 119
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I+ + ++ I CLP ++P+ IE+++ ++ NT + +SD+ + ++ E D IA
Sbjct: 120 AILIQQLDEIEIECLPMDIPQSIEVDVSHIDFNTPVFVSDLDIFTNEDIVVFREADDVIA 179
Query: 181 TAIIPVN 187
+ I P +
Sbjct: 180 SLIEPTS 186
>gi|428319716|ref|YP_007117598.1| 50S ribosomal protein L25 [Oscillatoria nigro-viridis PCC 7112]
gi|428243396|gb|AFZ09182.1| 50S ribosomal protein L25 [Oscillatoria nigro-viridis PCC 7112]
Length = 201
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 99/187 (52%), Gaps = 14/187 (7%)
Query: 4 IAFERKKKGTSFSRN-LRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSILN 61
+A E +K+ N LR+ G +P ++YG + + +++ + H LKK ++++++
Sbjct: 3 LAVECQKRAEGSKPNALRRSGLIPAVLYGHKGSESISLTIKAKTVEHLLKKHAVNNTLID 62
Query: 62 LEI-----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAV 116
L I GK LLR Q+H +K H F V T+ + V++ L+F+ + V
Sbjct: 63 LSIPDLSWSGKT---LLREVQVHPWKGYPYHLSFFSVATQDSLEVELSLNFVGEAV--GV 117
Query: 117 KLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
KL I+ V++ L + C P ++P+ IE+++ ++V ++H+ ++ LP GV + E D
Sbjct: 118 KLEGGILDTVLTQLAVKCKPDSIPEGIEVDISNLKVGDALHIHELVLPAGVVAL--GEPD 175
Query: 177 PTIATAI 183
+ T +
Sbjct: 176 QVVVTVL 182
>gi|406887537|gb|EKD34292.1| hypothetical protein ACD_75C02403G0002, partial [uncultured
bacterium]
Length = 200
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
RK+ G +R RK G P + YG ++ + +S+N + +K + + L I G+
Sbjct: 11 RKETGKGPARRFRKKGLTPAVFYGRGEEAIPLSVNVTDLTKIIKTRK-ENIFIKLLIEGE 69
Query: 68 ---VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
+L +++ Q+ + HADF + + K+ + +PL F+ + I N +
Sbjct: 70 NSLEKLTMIKELQIEPVSRRFYHADFYEIRMDHKLTIDIPLRFVGTPIGVE---NGGELQ 126
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVI 170
++ D+ +SCLP +P FI++++ +E+ SI + D+++P GV V+
Sbjct: 127 HLKRDIKVSCLPAAMPDFIDVDVSGLEIGASIKIQDLQIPEGVEVL 172
>gi|196250765|ref|ZP_03149452.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. G11MC16]
gi|196209715|gb|EDY04487.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. G11MC16]
Length = 210
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ERK K S R +R G +P ++YG D IS++ + AL++ HS ++ L++
Sbjct: 7 AKERKDKKHSTLRRIRSQGGIPAVLYGKKVDNKMISISAADLEKALREGGRHS-LVTLKV 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VLLR Q + +LHADFQ VD ++ V V + + +P VK + ++
Sbjct: 66 DGEDYSVLLREVQRDPLRGELLHADFQAVDMSTEVDVDVEVRLVGE--APGVK-DGGVLQ 122
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ +L I LP N+P IE+++ ++V I + D++ + H E IAT +
Sbjct: 123 QNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEINHEPSE--VIATILP 180
Query: 185 P 185
P
Sbjct: 181 P 181
>gi|384915755|ref|ZP_10015964.1| 50S ribosomal protein L25 [Methylacidiphilum fumariolicum SolV]
gi|384526835|emb|CCG91835.1| 50S ribosomal protein L25 [Methylacidiphilum fumariolicum SolV]
Length = 220
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKD-PVKISMNH-NMIYHALKKETFHSSILNLEIY 65
RK G S + LR G++P I+YG + P++I ++H + E +LNLEI
Sbjct: 12 RKAVGKSAVKKLRANGRIPAILYGKKSNLPLEIPATELRDLFHGKRVEKV---LLNLEII 68
Query: 66 GKVE----LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
E L L+ QLH ++H D + +++K+H ++ L FI A+K +
Sbjct: 69 DTEEKKSTLAFLQEIQLHPITDKLVHLDLHELSSDEKLHAEIDLVFIGE--PQALKSGTA 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIH 171
+ + L ISC PK+LP I +++E+++ S+H++DI LP GV ++
Sbjct: 127 NLDISLRRLKISCFPKDLPNTIPVSIEQLKTGESLHVADIPLPPGVECLN 176
>gi|418030602|ref|ZP_12669087.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|449092765|ref|YP_007425256.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis XF-1]
gi|351471661|gb|EHA31774.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|449026680|gb|AGE61919.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis XF-1]
Length = 208
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A ER S RN+R G VPGIIYG + +S++ + L+ E ++++ L
Sbjct: 8 LTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEG-KNAVITL 66
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E+ G+ V++ + Q K + HADFQ V+ + I V+VP+H I VK N +
Sbjct: 67 EVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAI--GVK-NGGV 123
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ + L + PK +P+ IE ++ ++VN + ++D LP G + E D +A+
Sbjct: 124 LQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIAD--LPAGGDYSFNHESDEVVASI 181
Query: 183 IIP 185
+ P
Sbjct: 182 LPP 184
>gi|409402261|ref|ZP_11251851.1| 50S ribosomal protein L25/general stress protein Ctc [Acidocella
sp. MX-AZ02]
gi|409129121|gb|EKM98988.1| 50S ribosomal protein L25/general stress protein Ctc [Acidocella
sp. MX-AZ02]
Length = 245
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
I A R + G +R R+ GKVP +IYG ++P I+++ + LK+ + S + +
Sbjct: 35 IEASARSRAGKGVARATRREGKVPAVIYGARQEPSLIALDPRTVMKELKRGGWRSRLYEI 94
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ G L+R+ H H DFQR+ + + V V +HF+N SP +K +
Sbjct: 95 DVAGTKTRALMRDVSFHPVTDQPEHVDFQRLVAGEPVKVAVAVHFLNEATSPGLKRGG-V 153
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIK 162
++ V + + ++P+ EI+L K+++N ++ D++
Sbjct: 154 LNVVRHKVEVVVDADHIPEKFEIDLGKLDINDNVRWHDLQ 193
>gi|408418648|ref|YP_006760062.1| 50S ribosomal protein L25 RplY [Desulfobacula toluolica Tol2]
gi|405105861|emb|CCK79358.1| RplY: 50S ribosomal protein L25 [Desulfobacula toluolica Tol2]
Length = 215
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 94/181 (51%), Gaps = 8/181 (4%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI--- 64
R+K G +R LR+ ++P I+YG KD + +S++ ++K NL++
Sbjct: 11 REKSGKGVARKLRRNNEIPAIVYGAKKDSMMLSLDTVAFDRIIRKNGSMGLFFNLKVGGD 70
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ ++V+L+N Q+ + LH D +D + ++ + VP+ + S VK ++
Sbjct: 71 SGEEKMVMLKNMQMDTFGLKYLHIDLHEIDMDNQVSITVPVEAVGD--SKGVK-EGGLLQ 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ +L + C P + P I++++ ++V ++H+ DI L G+ + H E + T+ T +
Sbjct: 128 IIRRELDVLCKPTDAPDSIKVDISDLDVGDAVHVEDIDLGEGIEIPH--EVNFTVITIVA 185
Query: 185 P 185
P
Sbjct: 186 P 186
>gi|156741060|ref|YP_001431189.1| 50S ribosomal protein L25 [Roseiflexus castenholzii DSM 13941]
gi|226736357|sp|A7NI71.1|RL25_ROSCS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|156232388|gb|ABU57171.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Roseiflexus
castenholzii DSM 13941]
Length = 218
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 17 RNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELV-LLRN 75
+ LR+ G +P +YG +P+ + ++ ++A+ + ++++ L I G+ L +
Sbjct: 20 KRLRRSGILPATVYGKGIEPISVQVDARS-FNAVYRRAGRTALVELHIAGRQPLAAFIHA 78
Query: 76 FQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCL 135
Q H + ++HADF+ VD +++ V VPLH I E SP V+ +++ V++ + I L
Sbjct: 79 LQRHPVTRDIIHADFRAVDLSQEVEVAVPLH-IEGE-SPLVESGEAVLNQVLNAIEIRAL 136
Query: 136 PKNLPKFIEINLEKMEV-NTSIHLSDIKLPRGVSVIHSTEE 175
P N+P + +++ ++ + SIH+ D+ LP GV++ +E
Sbjct: 137 PSNIPAHLTVDISGLDAFDKSIHVRDLALPPGVTLATPGDE 177
>gi|15604456|ref|NP_220974.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Madrid E]
gi|383487426|ref|YP_005405106.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. GvV257]
gi|383488005|ref|YP_005405684.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Chernikova]
gi|383488850|ref|YP_005406528.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Katsinyian]
gi|383489690|ref|YP_005407367.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Dachau]
gi|383499830|ref|YP_005413191.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. BuV67-CWPP]
gi|383500667|ref|YP_005414027.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. RpGvF24]
gi|386082466|ref|YP_005999043.1| 50S ribosomal protein L25 [Rickettsia prowazekii str. Rp22]
gi|6225985|sp|Q9ZCV3.1|RL25_RICPR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|3861150|emb|CAA15050.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 (rplY) [Rickettsia prowazekii
str. Madrid E]
gi|292572230|gb|ADE30145.1| 50S ribosomal protein L25 [Rickettsia prowazekii str. Rp22]
gi|380757791|gb|AFE53028.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. GvV257]
gi|380758364|gb|AFE53600.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. RpGvF24]
gi|380760884|gb|AFE49406.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Chernikova]
gi|380761729|gb|AFE50250.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Katsinyian]
gi|380762576|gb|AFE51096.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. BuV67-CWPP]
gi|380763413|gb|AFE51932.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Dachau]
Length = 203
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + GT +R LR+ G+VP IIYG K P+ IS+ I +K F S ++NL I
Sbjct: 9 AKSRTEFGTGAARALRREGRVPAIIYGAGKTPISISLKEKEITKYYRKPAFISQLINLTI 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
K VL + +LH +V H DF ++ + + ++VP+ + E + VK
Sbjct: 69 DKKQYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ-KMEVPIVYEGKERALGVKRGGYF-- 125
Query: 125 NVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+I + + C N+P+ + I++ M + TS+ S ++LP+G S I T+++ +AT I
Sbjct: 126 NIIKRRVILLCDVNNIPRNVTIDVTNMPIGTSLKSSQVELPKGCSFI--TKKEFVLATII 183
>gi|16077120|ref|NP_387933.1| 50S ribosomal protein L25 [Bacillus subtilis subsp. subtilis str.
168]
gi|221307862|ref|ZP_03589709.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. subtilis str. 168]
gi|221312184|ref|ZP_03593989.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221317117|ref|ZP_03598411.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221321380|ref|ZP_03602674.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. subtilis str. SMY]
gi|321313722|ref|YP_004206009.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis BSn5]
gi|384173713|ref|YP_005555098.1| ribosomal protein L25, Ctc-form [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|402774295|ref|YP_006628239.1| ribosomal protein Ctc [Bacillus subtilis QB928]
gi|428277467|ref|YP_005559202.1| 50S ribosomal protein L25 [Bacillus subtilis subsp. natto BEST195]
gi|430757317|ref|YP_007211207.1| General stress protein CTC [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452912975|ref|ZP_21961603.1| ribosomal protein L25, Ctc-form [Bacillus subtilis MB73/2]
gi|585017|sp|P14194.4|CTC_BACSU RecName: Full=General stress protein CTC; AltName: Full=50S
ribosomal protein L25
gi|467441|dbj|BAA05287.1| expressed at the end of exponential growyh under condtions in which
the enzymes of the TCA cycle are repressed [Bacillus
subtilis]
gi|2632319|emb|CAB11828.1| ribosomal protein Ctc, binding 5S RNA [Bacillus subtilis subsp.
subtilis str. 168]
gi|291482424|dbj|BAI83499.1| 50S ribosomal protein L25 [Bacillus subtilis subsp. natto BEST195]
gi|320019996|gb|ADV94982.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis BSn5]
gi|349592937|gb|AEP89124.1| ribosomal protein L25, Ctc-form [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|402479481|gb|AFQ55990.1| Ribosomal protein Ctc, binding 5S RNA [Bacillus subtilis QB928]
gi|407955743|dbj|BAM48983.1| 50S ribosomal protein L25 [Bacillus subtilis BEST7613]
gi|407963014|dbj|BAM56253.1| 50S ribosomal protein L25 [Bacillus subtilis BEST7003]
gi|430021837|gb|AGA22443.1| General stress protein CTC [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452118003|gb|EME08397.1| ribosomal protein L25, Ctc-form [Bacillus subtilis MB73/2]
Length = 204
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A ER S RN+R G VPGIIYG + +S++ + L+ E ++++ L
Sbjct: 4 LTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEG-KNAVITL 62
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E+ G+ V++ + Q K + HADFQ V+ + I V+VP+H I VK N +
Sbjct: 63 EVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAI--GVK-NGGV 119
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ + L + PK +P+ IE ++ ++VN + ++D LP G + E D +A+
Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIAD--LPAGGDYSFNHESDEVVASI 177
Query: 183 IIP 185
+ P
Sbjct: 178 LPP 180
>gi|335040912|ref|ZP_08534032.1| 50S ribosomal protein L25 [Caldalkalibacillus thermarum TA2.A1]
gi|334179216|gb|EGL81861.1| 50S ribosomal protein L25 [Caldalkalibacillus thermarum TA2.A1]
Length = 208
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYG---GNKDPVKISMNHNMIYHALKKETFHSSILN 61
A ER S R LR+ GKVPGI+YG G+K P+++ N H L K+ ++++N
Sbjct: 6 AEERPDLRKSVRRKLRQSGKVPGIVYGKTIGSK-PIQVQQNE---LHRLLKQHGKNTVIN 61
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
LE+ G V++ Q + VLH DF + +K VPL + AV N
Sbjct: 62 LELDGVKPTVMIGEIQRDPITEDVLHVDFYEIKMNEKKTFTVPLEIVGEG---AVTKNGG 118
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
++ ++ + CLPK+LP+ I I++ +++ S+ ++D+ L + V+ E D + T
Sbjct: 119 VLQRHYQEIEVECLPKDLPESIPIDVSGLDIGDSVTVADLNLGDQIEVL--LEPDTVLLT 176
Query: 182 AIIP 185
P
Sbjct: 177 VTAP 180
>gi|171910045|ref|ZP_02925515.1| 50S ribosomal protein L25/general stress protein Ctc
[Verrucomicrobium spinosum DSM 4136]
Length = 224
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 5/163 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R +GTS + LRK G +P +IYG K+ +N ++ + ++NL+I G+
Sbjct: 12 RTAEGTSAVKRLRKAGSIPAVIYGKKHSNAKVEVNSKTFTAIIEHSASDNILVNLKIDGE 71
Query: 68 V--ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
L L++ Q + +LH DF V ++ IH VP+ + S I A K +
Sbjct: 72 ANDALALVQEVQHDYLRGGILHVDFHAVAADEDIHAAVPV--VLSGIEAAEK-KGGKLEF 128
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
V+ L + CLPK+LP+ I +++ + V + H+S++ LP GVS
Sbjct: 129 VLHSLEVHCLPKDLPESIALDVSYLNVGEATHVSELALPEGVS 171
>gi|40219|emb|CAA34524.1| unnamed protein product [Bacillus subtilis]
Length = 186
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A ER S RN+R G VPGIIYG + +S++ + L+ E ++++ L
Sbjct: 4 LTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEG-KNAVITL 62
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
E+ G+ V++ + Q K + HADFQ V+ + I V+VP+H I VK N +
Sbjct: 63 EVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAI--GVK-NGGV 119
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ + L + PK +P+ IE ++ ++VN + ++D LP G + E D +A+
Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISSLDVNEVLTIAD--LPAGGDYSFNHESDEVVASI 177
Query: 183 IIP 185
+ P
Sbjct: 178 LPP 180
>gi|357032397|ref|ZP_09094336.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter
morbifer G707]
gi|356414169|gb|EHH67817.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter
morbifer G707]
Length = 185
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 28 IIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI-YGKVELVLLRNFQLHAYKKLVL 86
++YGG ++PV IS++ ++ L + + S + NL++ G+ L+R+ QLH L
Sbjct: 1 MVYGGKQEPVIISLDPRLVLKELHRGGWSSRVYNLQVESGEPVPALIRDVQLHPVTDAPL 60
Query: 87 HADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEIN 146
H DFQRV K+HV+V + F E +P +K +++ V + + P ++P+ ++
Sbjct: 61 HVDFQRVAAGHKVHVQVAIAFTGEEQAPGIK-RGGVLNVVRHSVDVEVDPVSIPEHFTVD 119
Query: 147 LEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
L ++++ S+ D+K GV + D IA+ P
Sbjct: 120 LSALDIHDSVRWEDLKGTEGVVLTSGQSADMVIASIAPP 158
>gi|389580921|ref|ZP_10170948.1| ribosomal protein L25, Ctc-form [Desulfobacter postgatei 2ac9]
gi|389402556|gb|EIM64778.1| ribosomal protein L25, Ctc-form [Desulfobacter postgatei 2ac9]
Length = 207
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ G ++ LR +PGI+YG +PVK+S++ N +++ +L++ G+
Sbjct: 11 RESTGKGAAKKLRADNAIPGIVYGAKIEPVKVSIDVNTFDKVIRENGTTGLFFDLKVEGE 70
Query: 68 VE---LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
E +V+L+ Q+ + H DF +D + + + VP+ + S VK ++
Sbjct: 71 GETGRMVMLKEIQMDPFGLRYQHIDFHEIDMDATVSIVVPVEVQGT--SAGVK-EGGMVQ 127
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ DL + C PK+ P+ I++++ ++E+ SIH++DI L + + T + T+ T +
Sbjct: 128 IIRRDLEVICKPKDTPESIKLDISELEIGDSIHVADIDLGAEIEIPFDT--NFTVVTIVP 185
Query: 185 PVNTLESDNNSSIEK 199
P + SD+ EK
Sbjct: 186 PESG--SDDEEGEEK 198
>gi|269926740|ref|YP_003323363.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobaculum
terrenum ATCC BAA-798]
gi|269790400|gb|ACZ42541.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermobaculum
terrenum ATCC BAA-798]
Length = 205
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ G S + LRK G VP I+YG DP + +N H LK+ +S+++L+I
Sbjct: 10 ASKRELVGRSLN-TLRKQGFVPAIVYGYGIDPTPVQVNAREFEHTLKR-AGRTSLIDLQI 67
Query: 65 YGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ V +++ Q+H K +LHADF V+ E++I +VP+ + A++ N ++
Sbjct: 68 DDSQTVKVFIQDVQVHPVKLNILHADFHAVNLEEEIETEVPIVLVGE--PAAIRNNIGVL 125
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKM-EVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ L + P ++P IEIN+E + E++ +I+++DIK P G I S E+ +
Sbjct: 126 QRGLESLTVRAKPADIPHEIEINVEDLAEIDQTIYVADIK-PSGNYKITSDPEE--MVVK 182
Query: 183 IIPVN 187
I+PV
Sbjct: 183 IVPVQ 187
>gi|167627805|ref|YP_001678305.1| 50S ribosomal protein L25 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189042358|sp|B0TZF1.1|RL25_FRAP2 RecName: Full=50S ribosomal protein L25
gi|167597806|gb|ABZ87804.1| 50S ribosomal protein L25 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 96
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ G+ SR LR+ GK+P +IYGG+K+ V I ++H+ + H+ + + F SS + LEI
Sbjct: 8 AVKREDLGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAFFSSEITLEI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRV 93
G+ E V+++ Q H YK ++HADF RV
Sbjct: 68 DGQEERVIIKALQRHPYKVKLVHADFMRV 96
>gi|116626137|ref|YP_828293.1| 50S ribosomal protein L25 [Candidatus Solibacter usitatus
Ellin6076]
gi|116229299|gb|ABJ88008.1| LSU ribosomal protein L25P [Candidatus Solibacter usitatus
Ellin6076]
Length = 227
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIY-G 66
R +G + +R R G +P ++YG ++PV ++++ I ++ T ++I L I G
Sbjct: 12 RNSRGKNEARRTRMAGNIPAVVYGAYQEPVSVAVSPRDIVKIIRSNTGLNTIFTLAIAGG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPA-VKLNSCIISN 125
+ V++ + Q+ K +LHADF+RVD K+I V VP+ +E PA VK+ ++
Sbjct: 72 ETTPVMIVDRQVDPIKSTLLHADFKRVDLTKRIRVSVPVF---TEGEPAGVKVQGGLLEI 128
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKL 163
+ + I CLP ++P+ +N+ ++ + S SD+ L
Sbjct: 129 ISRAIEIECLPDDIPEKFVVNVSELMIGQSKRGSDVAL 166
>gi|134097416|ref|YP_001103077.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338]
gi|291004594|ref|ZP_06562567.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338]
gi|133910039|emb|CAM00151.1| 50S ribosomal protein L25 [Saccharopolyspora erythraea NRRL 2338]
Length = 208
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G +R R+ GKVP ++YG DP +S+ A+ +E H+++L L++ G
Sbjct: 11 RTEFGKGAARRTRRAGKVPAVLYGHGSDPKHLSLPAVEFARAI-RENGHNAVLTLDVAGS 69
Query: 68 -VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
EL L + H K + H D V +K+ V VP+ + E P ++++
Sbjct: 70 NSELALTKTITTHPIKNYIEHVDLLLVQRGEKVTVNVPV-VLTGEAGPG-----TLVTHE 123
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
+++L + ++P+ EI++E EV T I S+I LPRGV V+ + EE
Sbjct: 124 VTELSVEAEALHIPEQFEISIEGAEVGTQITASEIVLPRGV-VLQTDEE 171
>gi|91762774|ref|ZP_01264739.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718576|gb|EAS85226.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter
ubique HTCC1002]
Length = 228
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R K R+LR G +PGIIYGG K+++ + + K +F S+I+ L +
Sbjct: 6 ANTRNTKSKGDVRSLRSAGNIPGIIYGGPDQNQKVTVLKKTLKSLIDKGSFLSNIITLNL 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
GK + VL R + H DF RV KI ++VP+ FIN E SP +K +++
Sbjct: 66 DGKPQNVLPREITYNVISDEPTHIDFLRVVPGVKIRIEVPVVFINHETSPGLK-RGGVLN 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVS 168
V + + C + +P I I+L +++ S +S +KL GV+
Sbjct: 125 IVRRKIELKCPSEKIPSAITIDLGGVDIGESFKISSVKLEEGVT 168
>gi|254420965|ref|ZP_05034689.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3]
gi|196187142|gb|EDX82118.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3]
Length = 231
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R GT +R R+ G VPG++YGG+K PV +++N +L ++ L+ +
Sbjct: 32 RDGVGTGSARAARRAGFVPGVLYGGDKAPVAVAVNEKDFRKSLYTGKLLGHLVTLKYGEE 91
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V+ ++ Q +H D RVD I ++VP++F N++ +P V+ + V
Sbjct: 92 TQPVIAKDIQFDPVSDRPMHFDLMRVDQHAPIKIEVPVYFKNADDAPFVRQGGS-LEVVR 150
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+ I ++P+ + ++L K ++ +I SDI+LP+GV T+ D IAT
Sbjct: 151 HAVEIMVKADSIPEELVVDLIKSQMGDTIRFSDIELPKGVEPT-ITDRDFVIAT 203
>gi|307069530|ref|YP_003878007.1| 50S ribosomal subunit protein L25 [Candidatus Zinderia insecticola
CARI]
gi|306482790|gb|ADM89661.1| 50S ribosomal subunit protein L25 [Candidatus Zinderia insecticola
CARI]
Length = 214
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
MKI +F R K GT ++ R ++PG+IYG NK + + + ++ KK+ + +
Sbjct: 1 MKIHSFIRNKLGTYYNNKNRYKNRIPGVIYGNNKKNINLIFKKSELFKIFKKKNINILKI 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+ K L+ Q HAYKK +LH D R+ +KK+++ +PL F N + S AVK +
Sbjct: 61 IFKKKIKKFLIKNI--QFHAYKKEILHIDLLRISNKKKVNILIPLKFKNIKNSYAVKSEN 118
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSI 156
I+ + + I CLPK +PK+I +NL+ ++VN I
Sbjct: 119 AFINFIYKKIPIFCLPKYIPKYILLNLKNLKVNNPI 154
>gi|227486757|ref|ZP_03917073.1| stress induced RNA binding ribosomal protein L25p family protein
[Anaerococcus lactolyticus ATCC 51172]
gi|227235227|gb|EEI85242.1| stress induced RNA binding ribosomal protein L25p family protein
[Anaerococcus lactolyticus ATCC 51172]
Length = 216
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 96/177 (54%), Gaps = 4/177 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ G + + +RK +PG+IY N++ V + L+ + S+I+ L+I
Sbjct: 8 AEKREATGKNQVKKIRKNELIPGVIYAKNQENVNVQFTARDFEKVLR-QAGTSTIITLDI 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ + VL++ F H YK LH DFQ +D + I V VP+ +N + V N ++
Sbjct: 67 NGEGKEVLIKEFASHPYKNQFLHVDFQAIDQNQPIRVTVPVVLLNRDDMNEV--NGVLVQ 124
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
N + ++ + CLPK +P+ EI+++++++ + ++D+ + ++ EED + +
Sbjct: 125 N-LENVEVECLPKYIPQTAEIDVKELQIGDNKTVADLDIASNENITILVEEDEVVCS 180
>gi|163744226|ref|ZP_02151586.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus
indolifex HEL-45]
gi|161381044|gb|EDQ05453.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus
indolifex HEL-45]
Length = 218
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R G +R R+ G VPGI++GG+ +P+ I++ N + L++ F +++ NL++ G
Sbjct: 13 RTGTGKGAARQARRDGMVPGIVFGGDNEPLPINIPFNKLLTRLRQGRFKATLFNLKVEGH 72
Query: 68 VEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
++ V+ R+ Q H K L H D R+ KI++ + + E P +K +++ V
Sbjct: 73 DDVRVICRDVQRHVVKDLPTHIDLMRLKRTTKINLFINVEVKGEEECPGLK-KGGVLTLV 131
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPV 186
++ + ++P+F+ +++ +E+ S +S + LP G + + D IAT P
Sbjct: 132 RPEVELVVTAADIPEFVTVDVTGLEIGDSATISRVDLPEGAK--PTIDRDFVIATVSAPA 189
Query: 187 N 187
Sbjct: 190 G 190
>gi|254876899|ref|ZP_05249609.1| 50S ribosomal protein L25 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842920|gb|EET21334.1| 50S ribosomal protein L25 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 96
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ G+ SR LR+ GK+P +IYGG+K+ V I ++H+ + H+ + + F SS + LEI
Sbjct: 8 AVKREDLGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAFFSSEITLEI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRV 93
G+ E V+++ Q H YK ++HADF RV
Sbjct: 68 DGQEEKVIIKALQRHPYKVKLVHADFMRV 96
>gi|433602545|ref|YP_007034914.1| 50S ribosomal protein L25 [Saccharothrix espanaensis DSM 44229]
gi|407880398|emb|CCH28041.1| 50S ribosomal protein L25 [Saccharothrix espanaensis DSM 44229]
Length = 200
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A ER + G +R R+ GK+P ++YG DP +++ + + + +E +++L
Sbjct: 4 VRLAAEERTEFGKGAARRTRRAGKIPAVLYGHGSDPKHLALP-ALEFARVVREHGQNAVL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
L+I EL L + H K + H D V +K+ V+VP+ I E P +
Sbjct: 63 TLDIDSSSELALTKTVTTHPIKNYIEHVDLLLVQRGEKVTVEVPV-VITGEAGPGI---- 117
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
+++ ++ + + ++P +E+++ +E T IH SD+ LP G S++ E
Sbjct: 118 -LVTQDLTTIQLEVEALHIPDQVEVSVAGVEAGTQIHASDVALPSGASLVTDAE 170
>gi|297621050|ref|YP_003709187.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044]
gi|297376351|gb|ADI38181.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044]
gi|337292273|emb|CCB90310.1| 50S ribosomal protein L25 [Waddlia chondrophila 2032/99]
Length = 186
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMN---HNMIYHALKKETFHS 57
MK+ +R + S SR+LR +GK+P ++Y KD I+++ + +KK +
Sbjct: 1 MKLKFEQRTAEKKSDSRSLRNLGKIPAVLYVRGKDSEAIAVDAADFETVLRTVKKGRLST 60
Query: 58 SILNL-EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAV 116
+ L L + GK VL+++ Q H VLH DF+ + KI VKVP+ + +
Sbjct: 61 TKLALVDGTGKERNVLVKDIQYHVTTYNVLHLDFEELLDNVKIKVKVPIECVGEVDCVGI 120
Query: 117 KLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
KL ++ VI L + CLPK+LP+F +++++ + + S LSD+++P V
Sbjct: 121 KLGG-VLRRVIRYLRVHCLPKDLPEFFKMDVKTLGLKESRKLSDLEIPETV 170
>gi|350569063|ref|ZP_08937461.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Propionibacterium avidum ATCC 25577]
gi|348661306|gb|EGY78002.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Propionibacterium avidum ATCC 25577]
Length = 205
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER + G +R +R+ KVP ++YG + DP+ +++ + AL+ E + +L++EI
Sbjct: 9 AEERTEFGKGAARRIRRDDKVPAVMYGRDHDPIHVTLEGHATLLALRTE---NPLLSIEI 65
Query: 65 YGKVE-LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
GK L L ++ Q K V H D V +K+ V V L I E +P I
Sbjct: 66 EGKEPVLALPKDVQRDVLKGFVRHVDLLSVRRGEKVDVNVALR-ITGESAPG-----TIA 119
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+++ + N+P+ IEI++ +E T+I+L D+KLP G ++ E AT
Sbjct: 120 MTEFNEIEVEADLLNIPELIEIDVTGLEAGTTIYLGDVKLPEGTTLKGDPE--AVAATVA 177
Query: 184 IPVNTLESDNNSSIEKEKNNN 204
P D S E + +
Sbjct: 178 FPETEYAEDEESEGEDAEGGS 198
>gi|337286884|ref|YP_004626357.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermodesulfatator indicus DSM 15286]
gi|335359712|gb|AEH45393.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermodesulfatator indicus DSM 15286]
Length = 208
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 9/189 (4%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+++ A R K G +R LR G VPG+IYG +PV +++ N + L + I
Sbjct: 4 IELTATIRPKTGKEIARKLRAQGLVPGVIYGPETEPVPLAVKLNELKKYLYRYRDEQLIF 63
Query: 61 NLEIY--GKV--ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAV 116
NL + G ++ L+++ Q H +LH DF + E+++ V+VP+ + + V
Sbjct: 64 NLTLENNGSTLKKIALVKDLQYHPVTDEILHVDFYEISMEREVEVEVPIELVGK--AKGV 121
Query: 117 KLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ + ++ + ++CLP +P IE+++ +++ IH+ D+ P GV + + +E
Sbjct: 122 ETGGH-LQQLLQTMTVACLPGLIPDKIEVDVSELDQGDVIHVKDLTPPEGVRYLDNPDE- 179
Query: 177 PTIATAIIP 185
+ T + P
Sbjct: 180 -PVVTVLAP 187
>gi|269792684|ref|YP_003317588.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100319|gb|ACZ19306.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 213
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
R+ G R LR G VP ++YG G + +N +Y +T+ ++++ L + G
Sbjct: 12 REGLGKGACRKLRSEGMVPAVVYGPGYQSGKPGFVNEREVYKVCGTDTWETTVIELNVDG 71
Query: 67 KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNV 126
E+ L+R Q H + ++H DF ++ + K+ V+VP+H +N I VK ++
Sbjct: 72 NPEMALIREIQRHPLTRDIVHLDFLQMKKDHKVRVQVPVHLMNKGICVGVK-QGGVLEQH 130
Query: 127 ISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKL 163
++ + P+++P+ ++I+++ +E+ + +SD+ L
Sbjct: 131 HHEITVEVFPEDIPERVDIDVKGLELGAEVRISDLNL 167
>gi|325105366|ref|YP_004275020.1| 50S ribosomal protein L25 [Pedobacter saltans DSM 12145]
gi|324974214|gb|ADY53198.1| LSU ribosomal protein L25P [Pedobacter saltans DSM 12145]
Length = 196
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 110/204 (53%), Gaps = 12/204 (5%)
Query: 1 MKIIAFE---RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHS 57
MK IA R+ G ++ LR GKVP ++YGG K+ + +++ + + H
Sbjct: 1 MKTIAISGSSRENVGKRDAKELRYDGKVPAVLYGG-KEQIHFAVDAPALRDLVYSADVHF 59
Query: 58 SILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVK 117
+ LE+ G +L++ Q H + +LH DF ++ +KKI +++P+ + SP VK
Sbjct: 60 A--ELEVNGSKYKAILQDIQFHPLTEKILHVDFLQLFDDKKITMEIPVKLTGT--SPGVK 115
Query: 118 LNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP 177
+ ++ + L ++ LPK++P+++E++LE +EV S + D+K P G + + E+
Sbjct: 116 VGGKLVQK-LRKLKVNALPKDMPQYVEVSLEPLEVGKSTRVRDLK-PEGYLITNVGED-- 171
Query: 178 TIATAIIPVNTLESDNNSSIEKEK 201
TI + I+ +++ ++ + +K
Sbjct: 172 TIVSVIMSRALKQAEQQAAKDGKK 195
>gi|427430892|ref|ZP_18920606.1| LSU ribosomal protein L25p [Caenispirillum salinarum AK4]
gi|425878383|gb|EKV27100.1| LSU ribosomal protein L25p [Caenispirillum salinarum AK4]
Length = 180
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 25 VPGIIYGGNKDPVK-ISMNHNMIYHALKKETFHSSILNLEIYGK-VELVLLRNFQLHAYK 82
+PG++YG NK P + ++M+ + L K F++ + L + G E V++ + Q +
Sbjct: 1 MPGVVYG-NKQPTELVAMDPRPLIAELHKSGFNTRVFTLNVEGGNSETVMVHDVQFNPVT 59
Query: 83 KLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVIS-DLYISCLPKNLPK 141
DF RV +K++ V VP F+N E SP +K + NV+ ++ + LP+
Sbjct: 60 DDPQAVDFLRVSADKEVVVSVPTSFVNEEKSPGIKRGGVL--NVVRHEVEVKGKATGLPE 117
Query: 142 FIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
IE +L ++VN S+H+S +KLP GV+ T+ D TIAT P
Sbjct: 118 TIECDLTGLDVNDSLHISAVKLPAGVTPT-ITDRDFTIATIAAP 160
>gi|337755557|ref|YP_004648068.1| 50S ribosomal protein L25 [Francisella sp. TX077308]
gi|336447162|gb|AEI36468.1| LSU ribosomal protein L25p [Francisella sp. TX077308]
Length = 96
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ G+ SR LR+ GK+P +IYGG+K+ V I ++H+ + H+ + + F SS + LEI
Sbjct: 8 AAKREDLGSGASRRLRRAGKIPAVIYGGDKEAVSIVLDHDKVLHSTEDKAFFSSEITLEI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRV 93
G+ E V+++ Q H YK ++HADF RV
Sbjct: 68 DGQEEKVIIKALQRHPYKVKLVHADFMRV 96
>gi|333999131|ref|YP_004531743.1| 50S ribosomal protein L25, Ctc-form [Treponema primitia ZAS-2]
gi|333740870|gb|AEF86360.1| ribosomal protein L25, Ctc-form [Treponema primitia ZAS-2]
Length = 214
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 93/171 (54%), Gaps = 4/171 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + G++ +R RK G++P ++YG + I ++ ++++ S+I+ + +
Sbjct: 8 ARNRAESGSAEARRTRKEGRIPAVVYGRTGKALSIDLDALEFINSVRG-ISESTIVTINV 66
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ +++ Q + +LH DF V+ + KV +H + P I+
Sbjct: 67 DGQAHEAFVKDTQRNITDGQILHVDFYEVERGVSLRAKVSVHVHGN---PVGVREGGILE 123
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
+ + D+ + CLPK+LP+ I++++ +++VN SIH+ D+KL GV +I + ++
Sbjct: 124 SPLHDIEVECLPKDLPERIDVDIAELKVNQSIHVRDLKLGEGVRLISNPDQ 174
>gi|296329554|ref|ZP_06872040.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305672751|ref|YP_003864422.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296153297|gb|EFG94160.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305410994|gb|ADM36112.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 205
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A ER S RN+R G VPGIIYG + +S++ + L+ E ++++ L
Sbjct: 4 LTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDE-GKNTVITL 62
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ G+ V++ + Q K + HADFQ V+ + I V+VP+H I VK N +
Sbjct: 63 DVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAI--GVK-NGGV 119
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ + L + PK +P+ IE ++ ++VN + ++D LP G + E D +A+
Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISNLDVNEVLTIAD--LPAGGDYSFNHESDEVVASI 177
Query: 183 IIPVN--TLESDNNSSIEKE 200
+ P T E D S + +
Sbjct: 178 LPPQQQETAEIDEEESADAQ 197
>gi|404493646|ref|YP_006717752.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter
carbinolicus DSM 2380]
gi|109893375|sp|Q3A313.1|RL25_PELCD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77545682|gb|ABA89244.1| ribosomal protein L25 [Pelobacter carbinolicus DSM 2380]
Length = 208
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 7 ERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
+R+ G +R+LR+ G +P ++YG + + + + + E +S++ L+ G
Sbjct: 10 QREGLGKGTARSLRREGLIPAVMYGKGVENCSLVVEPKQLAAIIGSEAGLNSLITLKGEG 69
Query: 67 KVE--LVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
+ +V+L++ Q+ ++ LH DFQ +D K HV VPL + N II
Sbjct: 70 AFDGKVVILKDMQVDPIRQTPLHVDFQAIDLNAKTHVLVPLVVVGKSEGEKQGGNLQIIR 129
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ ++ + CLP N+P IE+++ + + ++H+ D++LP GV +
Sbjct: 130 H---EVELVCLPANIPANIEVDVTALNIGDALHVQDVQLPEGVEI 171
>gi|157825998|ref|YP_001493718.1| 50S ribosomal protein L25 [Rickettsia akari str. Hartford]
gi|166223712|sp|A8GP85.1|RL25_RICAH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157799956|gb|ABV75210.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
akari str. Hartford]
Length = 199
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + GT +R LR+ G+VP IIYG K PV IS+ I +K F S ++N+ I K
Sbjct: 12 RTEFGTGAARALRREGRVPAIIYGAGKTPVSISLEEKAITKYYRKPAFISQLINVTIDQK 71
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
VL + +LH +V H DF ++ + + ++VP+ + E + VK N++
Sbjct: 72 QYKVLPKAVELHPVTDMVRHVDFVFLEAKTQ-KMEVPIVYEGKERALGVKRGGYF--NIV 128
Query: 128 -SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
+ + C N+P+ + I++ M + TS+ S I+LP+G S + E
Sbjct: 129 KRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKE 176
>gi|442322502|ref|YP_007362523.1| 50S ribosomal protein L25 [Myxococcus stipitatus DSM 14675]
gi|441490144|gb|AGC46839.1| 50S ribosomal protein L25 [Myxococcus stipitatus DSM 14675]
Length = 226
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 89/166 (53%), Gaps = 4/166 (2%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGN-KDPVKISMNHNMIYHALKKETFHSSILNLE 63
A R+ G F+R LR G VP ++YG + + PV I+++ + A+ ++++ L+
Sbjct: 10 AKSREGSGKGFARRLRAQGLVPAVVYGKHMQKPVHIAVDPKAVRTAINTPHKFNTLIQLK 69
Query: 64 IYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
+ VLL+++Q+ + +LH DF V + + V VPL A + ++
Sbjct: 70 LADGTHQVLLKDYQMDPVTRDILHVDFIGVRENEAVKVNVPLVLTGKAQGVA---DGGLL 126
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
+ +L + LP +P+ IE ++ +++ ++H++DIKLP G+S+
Sbjct: 127 TQARRELEVWALPAAIPERIEADVTALKIAEAMHVNDIKLPAGISI 172
>gi|395203410|ref|ZP_10394644.1| ribosomal L25P family protein [Propionibacterium humerusii P08]
gi|328908364|gb|EGG28123.1| ribosomal L25P family protein [Propionibacterium humerusii P08]
Length = 200
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R + G +R +R+ KVP ++YG + DP+ ++++ + AL+ E + +L++EI
Sbjct: 9 AEQRTEFGKGAARRIRRNDKVPAVMYGHDHDPIHVTLDGHATLLALRTE---NPLLSIEI 65
Query: 65 YGKVELVLL-RNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G+ ++ L ++ Q K V H D V +K+ V V L + +
Sbjct: 66 EGREPMLALPKDIQRDVLKGFVRHVDLLSVRRGEKVDVNVALRVTGESAPGTIAMTESNE 125
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
V +DL N+P+ +EI++ +E T+I+L D+KLP G S++ E AT +
Sbjct: 126 IEVQADLL------NIPEVVEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAE--AVAATVV 177
Query: 184 IP-VNTLESDNNSSIEKEK 201
P +E ++ +EK
Sbjct: 178 FPETEPVEGEDAEGESEEK 196
>gi|350264152|ref|YP_004875459.1| 50S ribosomal protein L25 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349597039|gb|AEP84827.1| ribosomal protein L25, Ctc-form [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 205
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A ER S RN+R G VPGIIYG + +S++ + L+ E ++++ L
Sbjct: 4 LTAKERTDFTRSSLRNIRTSGHVPGIIYGKDTGNKPVSLDSVELIKTLRDEG-KNTVITL 62
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ G+ V++ + Q K + HADFQ V+ + I V+VP+H I VK N +
Sbjct: 63 DVSGEKHSVMVTDLQTDPLKNEITHADFQVVNMSEDIEVEVPIHLTGEAI--GVK-NGGV 119
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ + L + PK +P+ IE ++ ++VN + ++D LP G + E D +A+
Sbjct: 120 LQQPLYALTVKAKPKAIPQTIEADISNLDVNEVLTIAD--LPAGGDYSFNHESDEVVASI 177
Query: 183 IIP 185
+ P
Sbjct: 178 LPP 180
>gi|56418580|ref|YP_145898.1| 50S ribosomal protein L25 [Geobacillus kaustophilus HTA426]
gi|375006853|ref|YP_004980482.1| 50S ribosomal protein L25 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|68053036|sp|Q5L3U8.1|RL25_GEOKA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56378422|dbj|BAD74330.1| 50S ribosomal protein L25 [Geobacillus kaustophilus HTA426]
gi|359285698|gb|AEV17382.1| 50S ribosomal protein L25 [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 210
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER K S +R G +P I+YG + I ++ + AL+ E +S+L L++
Sbjct: 7 AKERADKKRSTLHRIRSQGGIPAILYGKKVENKMIFVSTAELEKALR-EGGRTSLLTLKV 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VLLR Q + +LHADFQ VD ++ + V + + +P VK + ++
Sbjct: 66 GGEEHSVLLRELQRDPLRGHLLHADFQAVDMSTEVDIDVEVRLVGE--APGVK-DGGVLQ 122
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ +L I LP N+P IE+++ ++V ++ + D+K + H E IAT +
Sbjct: 123 QNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVKTDGKFEINHEPSE--VIATILP 180
Query: 185 PVNTLESDNNSSIE 198
P E D+ E
Sbjct: 181 PQQEEEIDSGEQQE 194
>gi|396584267|ref|ZP_10484747.1| ribosomal protein L25, Ctc-form [Actinomyces sp. ICM47]
gi|395548096|gb|EJG15432.1| ribosomal protein L25, Ctc-form [Actinomyces sp. ICM47]
Length = 198
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 97/168 (57%), Gaps = 10/168 (5%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A ER + G SR R+ GKVP ++YG ++P + + + ++ ++ ++++ L
Sbjct: 7 LLAEERSEFGKGASRRARRAGKVPTVLYGHGEEPRHLDVPGHDLFLIVRGNK--NALVEL 64
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAV-KLNSC 121
+I GK +L L+++ Q+H ++ +LHADFQ V +K+ V+VP+ I + V L
Sbjct: 65 KIDGKSQLALVKDVQVHPVRRDILHADFQAVKAGEKVDVEVPVVVIGEPVPGTVHSLEEF 124
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
I + ++P+ +E+++E +E +++H+SD+KLP GV V
Sbjct: 125 AI-------LVKAPATSIPEHVEVSIEGIEAGSAVHVSDLKLPAGVEV 165
>gi|57339950|gb|AAW49962.1| hypothetical protein FTT0675 [synthetic construct]
Length = 131
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ GT SR LR+ GK+P +IYGG K+ V + ++H+ + H+ + + F SS + L+I
Sbjct: 34 AEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFFSSEITLDI 93
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRV 93
GK E V+++ Q H YK ++HADF RV
Sbjct: 94 DGKQEKVIIKALQRHPYKVKLIHADFMRV 122
>gi|406986468|gb|EKE07054.1| hypothetical protein ACD_18C00202G0002 [uncultured bacterium]
Length = 219
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 109/202 (53%), Gaps = 14/202 (6%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
+ + +K+ + ++R G VPG++YG +++P +S+ + + E S++L+ +
Sbjct: 4 SLQAQKRSGKDASSIRAQGFVPGVVYGPDREPASVSVKATEL-QKIYNEAGESTLLDFTL 62
Query: 65 YG-KVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G K VL+++ Q K + H DF+++ ++ V L ++ ++PAVK S +
Sbjct: 63 DGEKTVKVLIQDLQYSPVKGNITHVDFRQIQMGVEMEATVELEYVG--LAPAVKELSGTL 120
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEV-NTSIHLSDIKLPRGVSVIHSTEE-DPTIAT 181
S + L + CLP+ L I+++L+ ++ + +I++ DIKLP GV STE+ + +A
Sbjct: 121 SIMKDSLDVKCLPEKLVTSIQVSLDGLKTFDDAIYVKDIKLPEGV---FSTEDAELLLAK 177
Query: 182 AIIPVN-----TLESDNNSSIE 198
+ P++ +E N SIE
Sbjct: 178 VVAPLSEEAQKAMEEGNTGSIE 199
>gi|307151053|ref|YP_003886437.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Cyanothece
sp. PCC 7822]
gi|306981281|gb|ADN13162.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cyanothece
sp. PCC 7822]
Length = 191
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSI 59
M++ +K+ S LR+ G +P +YG + + +++ LKK + ++++
Sbjct: 1 MQVTIECQKRPEGSKPNALRRQGLIPAALYGHKGTESISLTVKEKDAQVLLKKASVNNTL 60
Query: 60 LNLEI-----YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
+++ I GK L+R Q+H +K+ V H F V KI V VPLH + +
Sbjct: 61 VDVNIPDVPWSGKA---LIREVQIHPWKRSVYHLSFFSVAAHGKIEVVVPLHLVGE--AA 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
VK +I VIS + + CLP+++P+ I+I+L + + S+ + D+KLP GV+ +
Sbjct: 116 GVK-QGGLIEQVISSIAVDCLPESIPEAIDIDLGPLGIGDSVSIGDLKLPEGVTCL---- 170
Query: 175 EDPT 178
+DP+
Sbjct: 171 DDPS 174
>gi|303327047|ref|ZP_07357489.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3]
gi|345890985|ref|ZP_08841846.1| 50S ribosomal protein L25 [Desulfovibrio sp. 6_1_46AFAA]
gi|302863035|gb|EFL85967.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3]
gi|345048710|gb|EGW52533.1| 50S ribosomal protein L25 [Desulfovibrio sp. 6_1_46AFAA]
Length = 205
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 7 ERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI-- 64
+R+ G S LR +PG+ Y G + + + + L +E H+++ NLEI
Sbjct: 11 KREDCGKGPSGRLRSQELIPGVFYTGKGENITVQA-PTLPLEKLYEEVGHTTVFNLEIDE 69
Query: 65 --YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
VL+ Q H YKK H DF VD K++ V VPL F+ +S VKL +
Sbjct: 70 NGQKSTHPVLIWQVQRHPYKKCFTHIDFYGVDLNKEVKVDVPLEFVG--VSRGVKLGG-V 126
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHS 172
+ + +S P ++PK I I++ M++N +++++D++LP V+ ++
Sbjct: 127 LETYRESVRLSSKPLDMPKKITIDVSDMDINDTVNMADLQLPANVTAVYD 176
>gi|99080057|ref|YP_612211.1| 50S ribosomal protein L25 [Ruegeria sp. TM1040]
gi|123379135|sp|Q1GK67.1|RL25_SILST RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|99036337|gb|ABF62949.1| LSU ribosomal protein L25P [Ruegeria sp. TM1040]
Length = 209
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQLHAYKK 83
VPG+++GG+ DP+ I + +N++ LK F S++ NL++ G ++ V+ R+ Q K
Sbjct: 30 VPGVVFGGDADPLAIQIPYNVLLKRLKAGRFKSTLFNLKVEGHDDVRVICRDVQRDVVKD 89
Query: 84 LVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFI 143
L H D R+ KI++ +P+ FIN E +K +++ V +++ + ++P+ +
Sbjct: 90 LPTHFDLMRLRRTSKINLFIPVEFINEEECVGLKRGG-VLTVVRAEVELVVTAGDIPEKL 148
Query: 144 EINLEKMEVNTSIHLSDIKLPRG 166
++L + IH+SD+ LP G
Sbjct: 149 TVDLTGKAIGDVIHISDVTLPEG 171
>gi|114767366|ref|ZP_01446171.1| ribosomal protein L25 [Pelagibaca bermudensis HTCC2601]
gi|114540537|gb|EAU43613.1| ribosomal protein L25 [Roseovarius sp. HTCC2601]
Length = 178
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQLHAYKK 83
VPGI++GG+ +P+ I + N + LK F S++ NL++ G ++ V+ R+ Q K
Sbjct: 2 VPGIVFGGDAEPLAIQLPFNELLKRLKAGRFKSTLFNLKVDGHDDVRVICRDVQRDVVKD 61
Query: 84 LVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFI 143
L H D R+ +I++ + + FIN E +P +K +++ V ++ + L ++P I
Sbjct: 62 LPTHFDLMRLRRTSRINLFIHVDFINEETAPGLK-KGGVLTIVRQEVELEVLAGDIPDHI 120
Query: 144 EINLEKMEVNTSIHLSDIKLPRG 166
++L ++ IH+SD+ LP G
Sbjct: 121 TVDLADKQIGDVIHISDVTLPDG 143
>gi|56707795|ref|YP_169691.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670266|ref|YP_666823.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis FSC198]
gi|118497599|ref|YP_898649.1| 50S ribosomal protein L25 [Francisella novicida U112]
gi|134302021|ref|YP_001121990.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187931857|ref|YP_001891842.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|195536299|ref|ZP_03079306.1| ribosomal L25p family protein [Francisella novicida FTE]
gi|208779400|ref|ZP_03246746.1| ribosomal L25p family [Francisella novicida FTG]
gi|254369280|ref|ZP_04985292.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370293|ref|ZP_04986298.1| hypothetical protein FTBG_00046 [Francisella tularensis subsp.
tularensis FSC033]
gi|254372963|ref|ZP_04988452.1| 50S ribosomal protein L25 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254374414|ref|ZP_04989896.1| hypothetical protein FTDG_00582 [Francisella novicida GA99-3548]
gi|254874608|ref|ZP_05247318.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379717044|ref|YP_005305380.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725648|ref|YP_005317834.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis TI0902]
gi|385792978|ref|YP_005825954.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|385794434|ref|YP_005830840.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis NE061598]
gi|421751833|ref|ZP_16188870.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis AS_713]
gi|421753687|ref|ZP_16190676.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 831]
gi|421757413|ref|ZP_16194293.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 80700103]
gi|421759271|ref|ZP_16196104.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 70102010]
gi|424674591|ref|ZP_18111507.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 70001275]
gi|71153143|sp|Q5NH01.1|RL25_FRATT RecName: Full=50S ribosomal protein L25
gi|123169478|sp|Q14IF3.1|RL25_FRAT1 RecName: Full=50S ribosomal protein L25
gi|166223682|sp|A0Q6N0.1|RL25_FRATN RecName: Full=50S ribosomal protein L25
gi|166223683|sp|A4IY68.1|RL25_FRATW RecName: Full=50S ribosomal protein L25
gi|226736324|sp|B2SH55.1|RL25_FRATM RecName: Full=50S ribosomal protein L25
gi|56604287|emb|CAG45308.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320599|emb|CAL08691.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis FSC198]
gi|118423505|gb|ABK89895.1| 50S ribosomal protein L25 [Francisella novicida U112]
gi|134049798|gb|ABO46869.1| ribosomal protein L25 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568536|gb|EDN34190.1| hypothetical protein FTBG_00046 [Francisella tularensis subsp.
tularensis FSC033]
gi|151570690|gb|EDN36344.1| 50S ribosomal protein L25 [Francisella novicida GA99-3549]
gi|151572134|gb|EDN37788.1| hypothetical protein FTDG_00582 [Francisella novicida GA99-3548]
gi|157122230|gb|EDO66370.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica FSC022]
gi|187712766|gb|ACD31063.1| 50S ribosomal L25p family [Francisella tularensis subsp.
mediasiatica FSC147]
gi|194372776|gb|EDX27487.1| ribosomal L25p family protein [Francisella tularensis subsp.
novicida FTE]
gi|208745200|gb|EDZ91498.1| ribosomal L25p family [Francisella novicida FTG]
gi|254840607|gb|EET19043.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158969|gb|ADA78360.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis NE061598]
gi|332678303|gb|AEE87432.1| LSU ribosomal protein L25p [Francisella cf. novicida Fx1]
gi|377827097|gb|AFB80345.1| LSU ribosomal protein L25p [Francisella tularensis subsp.
tularensis TI0902]
gi|377828721|gb|AFB78800.1| LSU ribosomal protein L25p [Francisella tularensis subsp.
tularensis TIGB03]
gi|409086369|gb|EKM86488.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 831]
gi|409086560|gb|EKM86676.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis AS_713]
gi|409090997|gb|EKM91002.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 70102010]
gi|409092501|gb|EKM92472.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 80700103]
gi|417434635|gb|EKT89577.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 70001275]
Length = 96
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ GT SR LR+ GK+P +IYGG K+ V + ++H+ + H+ + + F SS + L+I
Sbjct: 8 AEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFFSSEITLDI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRV 93
GK E V+++ Q H YK ++HADF RV
Sbjct: 68 DGKQEKVIIKALQRHPYKVKLIHADFMRV 96
>gi|54026868|ref|YP_121110.1| 50S ribosomal protein L25 [Nocardia farcinica IFM 10152]
gi|68053081|sp|Q5YPZ5.1|RL25_NOCFA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|54018376|dbj|BAD59746.1| putative ribosomal protein L25 [Nocardia farcinica IFM 10152]
Length = 200
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 87/167 (52%), Gaps = 7/167 (4%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G +R R+ G VP ++YG +P +S+N + A+ +E +++LNL+I GK
Sbjct: 12 RTEFGKGAARRTRRAGNVPAVLYGHQSEPQHLSLNAQA-FAAILREHGTNAVLNLDIEGK 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+L L ++ +H ++ + HAD V +K+ V + + + +P +++
Sbjct: 71 KQLALTKSVVVHPIRRYIEHADLLIVKRGEKVTADVAV-TVTGDAAP-----GTLVTQEA 124
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
+ + I NLP+ IE+++E E+ T I I LP+GV++ E
Sbjct: 125 TTISIEAEALNLPEAIEVSVEDAEIGTQITAGSIALPQGVTLASDPE 171
>gi|410453263|ref|ZP_11307221.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
bataviensis LMG 21833]
gi|409933386|gb|EKN70314.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
bataviensis LMG 21833]
Length = 211
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ERK+ S R +R+ G +P IIYG + +S++ + ++ + +++L++
Sbjct: 7 AKERKELTYSALRKIRENGGIPAIIYGAKVESKPVSVSAADLTKTIRS-AGRNGVISLDV 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V+L ++Q A+KK +LH DF VD KI+V V L + + VK + ++
Sbjct: 66 DGSKHDVVLTDYQEDAFKKAILHVDFLAVDKSSKINVDVRLVLVGE--AAGVK-DGGVLQ 122
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ L I+ P N+P IE+++ ++V ++ DI G ++ H E+D IA+ +
Sbjct: 123 QPVHQLSITSTPDNIPPQIEVDISNLQVGETVLAGDIPSAGGFTINH--EDDEVIASILP 180
Query: 185 P-----VNTLESDNNSSIEKEKNNNS 205
P +N E + +KE+ +
Sbjct: 181 PRQEEEINAGEQQDGGHPDKEEGRET 206
>gi|387824247|ref|YP_005823718.1| 50S ribosomal protein L25 [Francisella cf. novicida 3523]
gi|328675846|gb|AEB28521.1| LSU ribosomal protein L25p [Francisella cf. novicida 3523]
Length = 96
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ GT SR LR+ GK+P +IYGG K+ V + ++H+ + H+ + + F SS + L+I
Sbjct: 8 AEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKAFFSSEITLDI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRV 93
GK E V+++ Q H YK ++HADF RV
Sbjct: 68 DGKEEKVIIKALQRHPYKVKLIHADFMRV 96
>gi|291453574|ref|ZP_06592964.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
albus J1074]
gi|291356523|gb|EFE83425.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
albus J1074]
Length = 196
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+KI A R + G +R +R+ KVPG++YG +P I + + + ALK ++
Sbjct: 4 VKISAETRSEFGKGAARRIRRESKVPGVVYGHGAEPAHIVLPGHELMMALKTSNV---LI 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L++ GK ELV+ + Q A K ++H D V +K+ V++P+ +++P L
Sbjct: 61 SLDLGGKSELVIPKAVQRDALKGHLVHIDLLTVKRGEKVQVEIPV-VAEGDLAPGANL-- 117
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ +V+S L + N+P+ + +++ ++ S+ DIKLP+GVS+ E+D +
Sbjct: 118 --LEHVLSALPVEAEATNIPESLTVSVAGLDAGDSVLAKDIKLPKGVSL--DVEDDTVV 172
>gi|84683373|ref|ZP_01011276.1| Ribosomal protein L25 [Maritimibacter alkaliphilus HTCC2654]
gi|84668116|gb|EAQ14583.1| Ribosomal protein L25 [Maritimibacter alkaliphilus HTCC2654]
Length = 180
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 4/158 (2%)
Query: 29 IYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQLHAYKKLVLH 87
+YGG+ DP+ I++N NM+ LK F S++ NL++ G+ ++ V+ RN Q K L H
Sbjct: 1 MYGGDVDPLPININFNMLLKKLKDGRFLSTLFNLKVEGQDDVRVICRNVQRDVVKDLPTH 60
Query: 88 ADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFIEINL 147
DF R+ +I++ +P+ FIN E +P VK ++ ++ + + ++P+ I ++L
Sbjct: 61 VDFLRLRRTSRINLFIPVEFINEEKAPGVKKGGVVVHVR-PEVELDVVAGDIPEKIVVDL 119
Query: 148 EKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
++ IH+SD++LP+G + E D IA P
Sbjct: 120 AGRDIGDVIHISDVELPQGAK--PTVERDFVIANISAP 155
>gi|259415376|ref|ZP_05739297.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B]
gi|259348606|gb|EEW60368.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B]
Length = 209
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 88/161 (54%), Gaps = 2/161 (1%)
Query: 7 ERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG 66
ER G +R R+ VPG+++GG+ DP+ I + +N++ LK F S++ NL++ G
Sbjct: 12 ERAGTGKGAARAARRAHMVPGVVFGGDADPLAIQIPYNVLLKRLKAGRFKSTLFNLKVEG 71
Query: 67 KVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
++ V+ R+ Q K L H D R+ KI++ +P+ FIN E +K +++
Sbjct: 72 HDDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPVEFINEEECVGLKRGG-VLTV 130
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
V +++ + ++P+ + ++L + IH+SD+ LP G
Sbjct: 131 VRAEVELIVTAGDIPEKLTVDLTGKAIGDVIHISDVTLPEG 171
>gi|428204194|ref|YP_007082783.1| 50S ribosomal protein L25 [Pleurocapsa sp. PCC 7327]
gi|427981626|gb|AFY79226.1| ribosomal protein L25, Ctc-form [Pleurocapsa sp. PCC 7327]
Length = 201
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 14/209 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSI 59
M + RK+ S LR+ G +P +YG + V +++N Y L++ ++++
Sbjct: 1 MSVTVECRKRPEGSKPNALRRQGLIPAALYGHQGAESVSLTINEKDAYFLLRRAFVNNTL 60
Query: 60 LNLEIY-----GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
++L+I GKV L+R Q H +KK + H F V I V VPL+ + +P
Sbjct: 61 VDLQIPDLPWNGKV---LIREVQAHPWKKTLYHLSFFSVAAHASIEVTVPLNPVGD--AP 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
VK I+ ++++L + C P +P IEI++ + + S+ +S++ LP G V+ + +
Sbjct: 116 GVK-QGGILEQMLTELTVECAPDRIPASIEIDISNLYIGDSVQVSELALPEG--VVATDD 172
Query: 175 EDPTIATAIIPVNTLESDNNSSIEKEKNN 203
+ T+ + + P E ++ E K +
Sbjct: 173 PNATVLSILAPAVMAEEVTVAAEETTKES 201
>gi|421755303|ref|ZP_16192253.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 80700075]
gi|409088638|gb|EKM88702.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
tularensis 80700075]
Length = 96
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ GT SR LR+ GK+P +IYGG K+ V + ++H+ + H+ + + F SS + L+I
Sbjct: 8 AEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVIHSTEDKAFFSSEITLDI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRV 93
GK E V+++ Q H YK ++HADF RV
Sbjct: 68 DGKQEKVIIKALQRHPYKVKLIHADFMRV 96
>gi|422439550|ref|ZP_16516372.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA3]
gi|422472720|ref|ZP_16549201.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA2]
gi|422572487|ref|ZP_16648056.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL044PA1]
gi|313835378|gb|EFS73092.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA2]
gi|314929235|gb|EFS93066.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL044PA1]
gi|314972372|gb|EFT16469.1| ribosomal protein L25, Ctc-form [Propionibacterium acnes HL037PA3]
Length = 200
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R + G +R +R+ KVP ++YG + DP+ ++++ + AL+ E + +L++EI
Sbjct: 9 AEQRTEFGKGAARRIRRNDKVPAVMYGHDHDPIHVTLDGHATLLALRTE---NPLLSIEI 65
Query: 65 YGKVELVLL-RNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
G+ ++ L ++ Q K V H D V +K+ V V L + +
Sbjct: 66 EGREPMLALPKDIQRDVLKGFVRHVDLLSVRRGEKVDVNVALRVTGESAPGTIAMTEFNE 125
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
V +DL N+P+ +EI++ +E T+I+L D+KLP G S++ E AT +
Sbjct: 126 IEVQADLL------NIPEVVEIDVTGLEAGTTIYLGDLKLPEGTSLLGDAE--AVAATVV 177
Query: 184 IP-VNTLESDNNSSIEKEK 201
P +E ++ +EK
Sbjct: 178 FPETEPVEGEDAEGESEEK 196
>gi|383501477|ref|YP_005414836.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
australis str. Cutlack]
gi|378932488|gb|AFC70993.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
australis str. Cutlack]
Length = 203
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 2 KIIAFERKKK---GTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSS 58
KI+ E K + GT +R LR+ G+VP IIYG K PV IS+ I +K F S
Sbjct: 3 KILELEAKPRTEFGTGAARALRREGRVPAIIYGAGKTPVSISLKEKEITKYYRKPAFISQ 62
Query: 59 ILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
++N+ I K VL + +LH +V H DF ++ K ++VP+ + E + VK
Sbjct: 63 LINVTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLEA-KTQKMEVPVVYEGKERALGVKR 121
Query: 119 NSCIISNVIS-DLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
N++ + + C N+P+ + I++ M + TS+ S I+LP+G S + E
Sbjct: 122 GGYF--NIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKE 176
>gi|406967445|gb|EKD92518.1| hypothetical protein ACD_28C00410G0004 [uncultured bacterium]
Length = 216
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 99/181 (54%), Gaps = 8/181 (4%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG- 66
+K+ T+ ++ LR +P YG D + + M+H + L ++ S+I++L + G
Sbjct: 14 QKRNATTKAKELRWSDIIPAQFYGEGMDNLSLQMDHQ-TFRKLYRQAGESTIIDLHVEGE 72
Query: 67 KVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
K L VL+ Q ++H DF V ++++H +P+H + SPAVK ++ N
Sbjct: 73 KAPLKVLVHEVQRDPLTDAIIHVDFVNVRMDRQVHTMIPIHVVGE--SPAVKNFGGVLIN 130
Query: 126 VISDLYISCLPKNLPKFIEINLEKM-EVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+++L + CLP +L +++++ + E+N S+H+ D+ +P+ + V+ T+ + T+ T
Sbjct: 131 SLTELEVKCLPNDLIHSVDVDVSGLEELNHSLHVKDLNIPKTIHVL--TDMERTVVTIAP 188
Query: 185 P 185
P
Sbjct: 189 P 189
>gi|186681114|ref|YP_001864310.1| 50S ribosomal protein L25/general stress protein Ctc [Nostoc
punctiforme PCC 73102]
gi|226736342|sp|B2J8B8.1|RL25_NOSP7 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|186463566|gb|ACC79367.1| transcriptional regulator, Fis family [Nostoc punctiforme PCC
73102]
Length = 199
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSI 59
M I K+ S R LR+ G +P +YG + + +++ + LK+ + ++++
Sbjct: 1 MTITVESLKRPEGSKPRALRRSGLIPANLYGHKGTESISLTIEAKTVERLLKRVSVNNTL 60
Query: 60 LNLEIY-----GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
+ L I GK LLR Q+H K H F V V+V L F+ + +
Sbjct: 61 IELNIADAPWRGKA---LLRELQIHPAKGTPYHLSFFAVAGHGDTTVEVRLRFVGTAV-- 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
VK ++ VI++L +SC P+N+P IEI++ +++ S+ +SDI P GV+ + E
Sbjct: 116 GVKQEGGVLDTVITELQVSCAPENIPDVIEIDVTNLQIGDSLSISDIPFPEGVTPLAELE 175
Query: 175 EDPTIATAIIPVNTLESDNNSSIE 198
+ +++P D + E
Sbjct: 176 R---LVVSVLPPQISADDAGTETE 196
>gi|374815153|ref|ZP_09718890.1| 50S ribosomal protein L25, Ctc-form [Treponema primitia ZAS-1]
Length = 214
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + G+ +R +R+ G++P ++YG + I ++ ++ K + S+I+ + + G+
Sbjct: 11 RTEAGSGGARRIRQAGRIPAVVYGRTGKALSIDLDALEFVNSAKGIS-ESTIVTINVDGQ 69
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+++ Q + +LH DF V+ + KV +H + P I+ + +
Sbjct: 70 THQAFVKDTQRNITDGKILHVDFYEVEAGISLRAKVSVHVHGN---PVGVREGGILESPL 126
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
++ + CLPK+LP+ I++++ +++VN SIH+ D+KL GV +I + ++
Sbjct: 127 HEIEVECLPKDLPERIDVDIAELKVNQSIHVRDLKLGDGVRLISNADQ 174
>gi|261417545|ref|YP_003251227.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus
sp. Y412MC61]
gi|297528420|ref|YP_003669695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. C56-T3]
gi|319765202|ref|YP_004130703.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y412MC52]
gi|261374002|gb|ACX76745.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y412MC61]
gi|297251672|gb|ADI25118.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. C56-T3]
gi|317110068|gb|ADU92560.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y412MC52]
Length = 210
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER K S R +R G +P I+YG + I ++ + L+ E +S+L L++
Sbjct: 7 AKERTDKKRSTLRRIRSQGGIPAILYGKKVENKMIFVSAAELEKVLR-EGGRTSLLTLKV 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VLLR Q + +LHADFQ VD ++ + V + + +P VK + ++
Sbjct: 66 GGEDYSVLLREMQRDPLRGELLHADFQAVDLSTEVDIDVEVRLVGE--APGVK-DGGVLQ 122
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ +L I LP N+P IE+++ ++V ++ + D++ + H E IAT +
Sbjct: 123 QNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVQTDGKFEINHEPSE--VIATILP 180
Query: 185 PVNTLESDNNSSIE 198
P E D+ E
Sbjct: 181 PQQEEEIDSGEQQE 194
>gi|89256299|ref|YP_513661.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica LVS]
gi|115314748|ref|YP_763471.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica OSU18]
gi|156502367|ref|YP_001428432.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254367634|ref|ZP_04983655.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica 257]
gi|290953135|ref|ZP_06557756.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica URFT1]
gi|422938705|ref|YP_007011852.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica FSC200]
gi|423050648|ref|YP_007009082.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica F92]
gi|109893364|sp|Q2A3P1.1|RL25_FRATH RecName: Full=50S ribosomal protein L25
gi|122325232|sp|Q0BM50.1|RL25_FRATO RecName: Full=50S ribosomal protein L25
gi|166223681|sp|A7NBX3.1|RL25_FRATF RecName: Full=50S ribosomal protein L25
gi|89144130|emb|CAJ79389.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica LVS]
gi|115129647|gb|ABI82834.1| ribosomal protein L25 [Francisella tularensis subsp. holarctica
OSU18]
gi|134253445|gb|EBA52539.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica 257]
gi|156252970|gb|ABU61476.1| Ribosomal L25p family protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|407293856|gb|AFT92762.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica FSC200]
gi|421951370|gb|AFX70619.1| 50S ribosomal protein L25 [Francisella tularensis subsp.
holarctica F92]
Length = 96
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +R+ GT SR LR+ GK+P +IYGG K+ V + ++H+ + H+ + + F SS + L+I
Sbjct: 8 AEKREDLGTGASRRLRRAGKIPAVIYGGEKEAVSVLLDHDKVLHSTEDKEFFSSEITLDI 67
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRV 93
GK E V+++ Q H YK ++HADF RV
Sbjct: 68 DGKQEKVIIKALQRHPYKVKLIHADFMRV 96
>gi|297565117|ref|YP_003684089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus
silvanus DSM 9946]
gi|296849566|gb|ADH62581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Meiothermus
silvanus DSM 9946]
Length = 205
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Query: 18 NLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVELVLLRNFQ 77
LR GK+PGI+Y + K+ ++ ++ + H ++ LE+ GK + VL+R
Sbjct: 17 RLRDSGKLPGILYNKQMNE-KVYVDLGEFDKVFRQASIHH-VITLELDGKTQDVLVRQVN 74
Query: 78 LHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPK 137
L K+ H DF + +++ + + VPL F+ + V+L ++ V+ D+ + P+
Sbjct: 75 LDKRKRRPSHVDFYAL-SDEPVAMYVPLKFVGT--PQGVRLGG-VMDTVLRDIEVKVSPR 130
Query: 138 NLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
N+P FIE+++ + + S+HLSD+KLP GV + + + D T+ T + P
Sbjct: 131 NIPDFIEVDVSGLGIGDSLHLSDLKLPPGVKL--NMKGDSTVVTIVPP 176
>gi|158319104|ref|YP_001511611.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus
oremlandii OhILAs]
gi|158139303|gb|ABW17615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus
oremlandii OhILAs]
Length = 191
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
RK G + S LR+ G VP +IYG N + + I ++HN + ++ ++ L I
Sbjct: 10 RKNVGKNSSHRLREKGYVPAVIYGSNINTIPIELDHNEVQECIRNNN-GGGLVTLNIDEN 68
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
V ++ Q ++H DFQ+VD +KIHV VP+ + +K + I+ +
Sbjct: 69 DYTVFIKEIQKDPVTGNIIHLDFQQVDQNEKIHVLVPIIL---KGKSNIKRSGSILQQQL 125
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIPVN 187
DL + C N+PK +E+++ + ++ + D++ +S++H E IA+
Sbjct: 126 RDLEVECSANNIPKALEVDISHFKPGDTLKVGDVEFGEEISIVHDAE--SIIASVAFAQQ 183
Query: 188 TLESD 192
+ES+
Sbjct: 184 NIESE 188
>gi|89100524|ref|ZP_01173385.1| 50S ribosomal protein L25 [Bacillus sp. NRRL B-14911]
gi|89084790|gb|EAR63930.1| 50S ribosomal protein L25 [Bacillus sp. NRRL B-14911]
Length = 211
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 97/181 (53%), Gaps = 6/181 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ERK+ S LR G +PG++YG + I +N ++ ET +++ +L++
Sbjct: 7 AKERKEFRNSNLTQLRNEGNIPGVVYGNKIESKAIYLNGPDFIKTIR-ETGRNAVFSLDV 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G V+L ++Q K + H DF+ VD ++I +V + + + VK + ++
Sbjct: 66 EGTKHDVVLSDYQADPLKNEITHLDFRAVDMSQEITAEVRIELVGD--AAGVK-DGGVLQ 122
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ +L +S P ++P+ +E+N+ ++V SI +DIK RG ++ +T+++ IA+ +
Sbjct: 123 QPVHELSVSAKPNDIPQSVEVNIADLQVGESITAADIKAGRGFTI--NTDDETVIASILA 180
Query: 185 P 185
P
Sbjct: 181 P 181
>gi|421744065|ref|ZP_16182072.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SM8]
gi|406687526|gb|EKC91540.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SM8]
Length = 196
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+KI A R + G +R +R+ KVPG++YG +P + + + + ALK ++
Sbjct: 4 VKISAETRSEFGKGAARRIRRESKVPGVVYGHGAEPAHVVLPGHELMMALKTSNV---LI 60
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L++ GK ELV+ + Q A K ++H D V +K+ V++P+ +++P L
Sbjct: 61 SLDLGGKSELVIPKAVQRDALKGHLVHIDLLTVKRGEKVQVEIPV-VAEGDLAPGANL-- 117
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ +V+S L + N+P+ + +++ ++ S+ DIKLP+GVS+ E+D +
Sbjct: 118 --LEHVLSALPVEAEATNIPESLTVSVAGLDAGDSVLAKDIKLPKGVSL--DVEDDTVV 172
>gi|398309137|ref|ZP_10512611.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
mojavensis RO-H-1]
Length = 205
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
+ A ER S R++R G VPGIIYG + +S++ + L+ E +++L L
Sbjct: 4 LTAKERTGFTRSSLRDIRTSGHVPGIIYGKDTANKPVSLDSVELIKTLRDE-GKNTVLTL 62
Query: 63 EIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCI 122
++ G+ V++ Q K V HADFQ V+ ++I V+VP+H I VK N +
Sbjct: 63 DVNGEKHAVMVTELQTDPLKNEVTHADFQVVNMSEEIEVEVPIHLTGEAI--GVK-NGGV 119
Query: 123 ISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATA 182
+ + L + PK +P+ IE ++ ++VN + + D LP G + E D +A+
Sbjct: 120 LQQPLYALTVKAKPKAIPQSIEADISGLDVNDVLTIED--LPAGGDYSFNHESDEVVASI 177
Query: 183 IIP 185
+ P
Sbjct: 178 LPP 180
>gi|448236354|ref|YP_007400412.1| 50S ribosomal protein L25 [Geobacillus sp. GHH01]
gi|445205196|gb|AGE20661.1| 50S ribosomal protein L25 [Geobacillus sp. GHH01]
Length = 210
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A ER K S +R G +P I+YG + I ++ + AL+ E +S+L L++
Sbjct: 7 AKERADKKRSTLHRIRSQGGIPAILYGKKVENKMIFVSTAELEKALR-EGGRTSLLTLKV 65
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
G+ VLLR Q + +LHADFQ VD ++ + V + + +P VK + ++
Sbjct: 66 GGEEHSVLLRELQRDPLRGELLHADFQAVDLSTEVDIDVEVRLVGE--APGVK-DGGVLQ 122
Query: 125 NVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAII 184
+ +L I LP N+P IE+++ ++V ++ + D++ + H E IAT +
Sbjct: 123 QNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVQTDGKFEINHEPSE--VIATILP 180
Query: 185 PVNTLESDNNSSIE 198
P E D+ E
Sbjct: 181 PQQEEEIDSGEQQE 194
>gi|261405476|ref|YP_003241717.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Paenibacillus
sp. Y412MC10]
gi|261281939|gb|ACX63910.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus
sp. Y412MC10]
Length = 210
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 98/172 (56%), Gaps = 14/172 (8%)
Query: 17 RNLRKIGKVPGIIYGGNKDPVKISMNHN---MIYHALKKETFHSSILNLEIYGKVELVLL 73
R LR+ G +PG++YG ++ + ++++ ++H + E F L++ GKV VL+
Sbjct: 23 RELRESGGLPGVVYGAGEESIPVAVDFKDTAKLFHTGRSEVFQ---LDIPGSGKVP-VLI 78
Query: 74 RNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYIS 133
++ Q + V H DF R+ K + V +P+ + + + A + I+ ++++ +
Sbjct: 79 KDIQ--KRRGNVSHVDFLRISMNKPVRVSIPVDY---QGTAAGTKSGGILQTQVTEIEVE 133
Query: 134 CLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
LP +LP +E ++ +E+ + ++D+K+P G++ +H++EE+ +AT I+P
Sbjct: 134 GLPGDLPTTLEADVSALEIGDKLTVADLKVPEGIT-LHASEEE-ILATVIVP 183
>gi|329925390|ref|ZP_08280312.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5]
gi|328939877|gb|EGG36214.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF5]
Length = 210
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 98/172 (56%), Gaps = 14/172 (8%)
Query: 17 RNLRKIGKVPGIIYGGNKDPVKISMNHN---MIYHALKKETFHSSILNLEIYGKVELVLL 73
R LR+ G +PG++YG ++ + ++++ ++H + E F L++ GKV VL+
Sbjct: 23 RELRESGGLPGVVYGAGEESIPVAVDFKDTAKLFHTGRSEVFQ---LDIPGSGKVP-VLI 78
Query: 74 RNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYIS 133
++ Q + V H DF R+ K + V +P+ + + + A + I+ ++++ +
Sbjct: 79 KDIQ--KRRGNVSHVDFLRISMNKPVRVSIPVDY---QGTAAGTKSGGILQTQVTEIEVE 133
Query: 134 CLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP 185
LP +LP +E ++ +E+ + ++D+K+P G++ +H++EE+ +AT I+P
Sbjct: 134 GLPGDLPTTLEADVSTLEIGDKLTVADLKVPEGIT-LHASEEE-ILATVIVP 183
>gi|294629795|ref|ZP_06708355.1| 50S ribosomal protein L25 [Streptomyces sp. e14]
gi|292833128|gb|EFF91477.1| 50S ribosomal protein L25 [Streptomyces sp. e14]
Length = 198
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 11/180 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+KI A R + G +R +R+ KVPG++YG DP+ +++ + + AL+ ++
Sbjct: 4 VKISAATRSEFGKGAARRIRRDNKVPGVLYGHGTDPLHLTLPGHELLLALRTPNV---LI 60
Query: 61 NLEIYGKV-ELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
+L+I GK EL + ++ Q K + H D V +K++V++P+ E++P L
Sbjct: 61 SLDIDGKSNELAIPKSVQRDPLKGFLEHVDLLLVKRGEKVNVEIPV-VAEGELAPGGNL- 118
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
+ +V+S L + ++P+ + +++E +E SIH DI LP GVS+ + +ED +
Sbjct: 119 ---LEHVLSSLPVEAEATHIPEQVTVSVEGLEAGASIHAKDITLPSGVSL--AVDEDAVV 173
>gi|390956456|ref|YP_006420213.1| 50S ribosomal protein L25 [Terriglobus roseus DSM 18391]
gi|390411374|gb|AFL86878.1| ribosomal protein L25, Ctc-form [Terriglobus roseus DSM 18391]
Length = 223
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
Query: 16 SRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIY-GKVELVLLR 74
+R +R G +P +IYG + I+++ I L E+ H++I +L I G ++
Sbjct: 22 ARRVRVSGLIPAVIYGAGIESQAITVDPKSILKILHSESGHNTIFDLNIENGAGAKAMIV 81
Query: 75 NFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISC 134
++Q K +LH D +R+ +K + V VP+ S I VK+ ++ V+ ++ + C
Sbjct: 82 DWQYEPIKGKLLHIDLKRIAMDKTMKVSVPVML--SGIPVGVKMGGGVLDQVLREIEVEC 139
Query: 135 LPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
P ++P I+I++ +E++ +IH+SD LP SV EE +A
Sbjct: 140 FPGDIPSHIDIDVTNLELHGAIHVSD--LPHTGSVKFLAEETALVA 183
>gi|392407041|ref|YP_006443649.1| 50S ribosomal protein L25 [Anaerobaculum mobile DSM 13181]
gi|390620177|gb|AFM21324.1| ribosomal protein L25, Ctc-form [Anaerobaculum mobile DSM 13181]
Length = 223
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSILNLEIY- 65
R++ G + ++ LRK G +P + YG G K+ V + + + I L + + +LN+
Sbjct: 13 REETGKNKAKRLRKKGYLPAVFYGPGYKESVPVMVRIDDIIPHLHSSHWKTLVLNVTFPD 72
Query: 66 GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
GK E+ ++R++Q + +LH DF ++ K+ V VPL N E VK +I +
Sbjct: 73 GKEEMAMIRDYQRDPLTRQILHLDFYQILRGHKVMVAVPLVLTNKEDCIGVKKGGVLIQS 132
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+ ++ + LP +P I I++E +++ I +SDIKLP ++ S + + TIA +
Sbjct: 133 -LHEIEMEVLPSEIPDEIYIDVEGLDIGQGIRVSDIKLPESATI--SVDPEETIAQVV 187
>gi|254464271|ref|ZP_05077682.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I]
gi|206685179|gb|EDZ45661.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium Y4I]
Length = 207
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++ ER G +R R+ G VPG++YGG+ +P+ I + N + LK F S++ NL
Sbjct: 8 LVVQERAGTGKGAARAARRAGMVPGVVYGGDAEPLAIQVPFNELLKKLKAGQFKSTLWNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G ++ V+ R+ Q K L H D R+ KI++ + + FIN + +P +K
Sbjct: 68 KVEGHDDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLYIHVEFINEDKAPGIK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRG 166
+++ V ++ ++ ++P+ I ++LE + + I +S + LP G
Sbjct: 127 MLTVVRPEVELNVTAGDIPEKIVVDLEGLNIGDVITISSVDLPAG 171
>gi|290959809|ref|YP_003490991.1| 50S ribosomal protein L25 [Streptomyces scabiei 87.22]
gi|260649335|emb|CBG72450.1| 50S ribosomal L25 protein [Streptomyces scabiei 87.22]
Length = 198
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+K+ A R + G +R +R+ KVP ++YG DPV I++ + + AL+ +L
Sbjct: 6 VKLEAETRTEFGKGAARRIRRASKVPAVVYGHGADPVHITLPGHALQLALRTPNV---LL 62
Query: 61 NLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNS 120
+L+I GK +L + + Q A K + H D V +K++V+V +H +++P +
Sbjct: 63 SLDIDGKTQLAIPKAVQRDAIKGFLDHVDLLLVKRGEKVNVEVYVH-TEGDLAP----GA 117
Query: 121 CIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTI 179
++ +V+S L + ++P+ + +++E +E SI DI LP+G ++ + +ED +
Sbjct: 118 YLLEHVLSTLTVEAEATHIPESVTVSIEGLEAGASILAKDIPLPKGTTL--AIDEDAVV 174
>gi|433460547|ref|ZP_20418176.1| 50S ribosomal protein L25 [Halobacillus sp. BAB-2008]
gi|432191389|gb|ELK48347.1| 50S ribosomal protein L25 [Halobacillus sp. BAB-2008]
Length = 217
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A +RK S +R LR G VP ++YG K+P+ +++N + ++ E ++I++L+I
Sbjct: 7 ANQRKDLKQSATRELRLNGNVPSVVYGKEKEPITVAVNSIELLKTVRDEG-KNAIISLDI 65
Query: 65 YGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
GK ++ V+L +Q+ K ++HADF V+ +++ V+VP+ E A ++
Sbjct: 66 DGKDKVDVMLHEYQVDPLKDQLIHADFYIVNMSEEMDVEVPVRL---EGEAAGAREGGVV 122
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
+ +L + P ++P+ I +++ ++ + S+ +SD+K RG + TE+D T ++
Sbjct: 123 QQPLYELAVRAKPADIPEEIVVDVSELNIGDSVMVSDLKESRGYEI---TEDDNTTIVSV 179
>gi|51473784|ref|YP_067541.1| 50S ribosomal protein L25 [Rickettsia typhi str. Wilmington]
gi|383752560|ref|YP_005427660.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. TH1527]
gi|383843395|ref|YP_005423898.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. B9991CWPP]
gi|71153659|sp|Q68WD3.1|RL25_RICTY RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|51460096|gb|AAU04059.1| 50S ribosomal protein L25 [Rickettsia typhi str. Wilmington]
gi|380759203|gb|AFE54438.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. TH1527]
gi|380760042|gb|AFE55276.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. B9991CWPP]
Length = 203
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R + GT +R LR+ G+VP IIYG K P+ IS+ I ++ F S ++NL I
Sbjct: 9 AKSRTEFGTGAARALRREGRVPAIIYGAGKIPISISLEEKEITKYYRRPAFISQLINLTI 68
Query: 65 YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIIS 124
K VL + +LH +V H DF ++ + + ++VP+ + E + VK
Sbjct: 69 DKKQYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ-KMEVPVVYEGKERALGVKRGGYF-- 125
Query: 125 NVI-SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
N+I + + C N+P+ + I++ M + TS+ S++KLP G S + T+++ +AT I
Sbjct: 126 NIIKRRVILLCDINNIPRNVTIDVTNMPIGTSLKSSEVKLPIGCSFV--TKKEFVLATII 183
>gi|124010550|ref|ZP_01695178.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134]
gi|123982281|gb|EAY23848.1| 50S ribosomal protein L25 [Microscilla marina ATCC 23134]
Length = 204
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 90/161 (55%), Gaps = 10/161 (6%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHA--LKKETFHSS 58
++II + R G S++LR+ G VP ++YGG+K ++ MI + H
Sbjct: 4 LEIIGYHRANLGKKSSKDLRRDGNVPCVLYGGDK---QVHFQSPMILFRDLVYTPNIHKV 60
Query: 59 ILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKL 118
+LN+E G +L++ Q H ++++HADF ++ +K I + VP+ ++ + SP V
Sbjct: 61 LLNVE--GDKYECILQDIQFHPVSEIIMHADFLQISEDKAIKMDVPVKYVGT--SPGVIG 116
Query: 119 NSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLS 159
++S ++ L +S LP +P+FIE+++ ++E+ S+ +
Sbjct: 117 GGRLVSK-LNKLKVSALPTKMPEFIEVDISELELGKSVKVG 156
>gi|254477596|ref|ZP_05090982.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11]
gi|214031839|gb|EEB72674.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11]
Length = 179
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGKVEL-VLLRNFQLHAYKK 83
VPG+++GG+ +P+ I + N + LK F S++ NL++ G+ ++ V+ R+ Q K
Sbjct: 2 VPGVVFGGDAEPMSIQIPFNELLKKLKAGRFKSTLWNLKVEGQEDVRVICRDVQRDVVKD 61
Query: 84 LVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKFI 143
L H D R+ K+++ VP+ FIN E +P +K +++ V ++ + ++P+ +
Sbjct: 62 LPTHFDLMRLRRTSKVNLFVPVEFINEEAAPGIK-RGGVLTAVRPEVELVVTAGDIPEKL 120
Query: 144 EINLEKMEVNTSIHLSDIKLPRG 166
++L + + ++ +S + +P G
Sbjct: 121 VVDLTGLNIGDTVTISSVTMPEG 143
>gi|126739655|ref|ZP_01755347.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6]
gi|126719301|gb|EBA16011.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6]
Length = 209
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Query: 3 IIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNL 62
++A R G +R R+ G VPG++YGG+ +P I + N + LK F S++ NL
Sbjct: 8 LVAQARAGTGKGAARAARRAGMVPGVVYGGDVEPQAIQIPFNELLKKLKAGQFKSTLWNL 67
Query: 63 EIYGKVEL-VLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
++ G+ ++ V+ R+ Q K L H D R+ KI++ +P+ F+N + P +K
Sbjct: 68 KVEGQEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLFIPVEFLNEDTCPGIK-KGG 126
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIAT 181
+++ V ++ + ++P+ I ++L + I +S I LP G + + D +A
Sbjct: 127 MLTVVRPEVELVVTAGDIPEKIVVDLADKAIGDVITISSIDLPGGSK--PTIDRDFVVAN 184
Query: 182 AIIPVNTLESDNNSS 196
P SD+
Sbjct: 185 IAAPGGLSSSDDEDG 199
>gi|367470305|ref|ZP_09470016.1| LSU ribosomal protein L25p [Patulibacter sp. I11]
gi|365814623|gb|EHN09810.1| LSU ribosomal protein L25p [Patulibacter sp. I11]
Length = 225
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R + + +R R+ G+VPG+IYGG+ +P I ++ + H L ++++L I G
Sbjct: 13 RDPQHSRDARRTRRTGQVPGVIYGGDLEPQPIVVDARTLRHTLAA---AGAVIDLSIDGA 69
Query: 68 --VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISN 125
+ V+L++ Q H + ++H D RVD ++ I V L + + + V+ ++
Sbjct: 70 STTQPVILKDAQRHPVRGEIMHIDLLRVDLKQAIQQPVTLELTDVDEAAGVR-EGGVVEQ 128
Query: 126 VISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
++ ++ + LP +P+ I +++ + + ++ L++ +P GV+++ E
Sbjct: 129 LLREVTVEALPNEIPESISLSILDLGIGHNLTLAEAVVPAGVTIVDDAE 177
>gi|254445745|ref|ZP_05059221.1| ribosomal protein L25, Ctc-form [Verrucomicrobiae bacterium DG1235]
gi|198260053|gb|EDY84361.1| ribosomal protein L25, Ctc-form [Verrucomicrobiae bacterium DG1235]
Length = 210
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSIL 60
+ I A R + G++ S LR G+VP ++YG +K P +S++ + L+ ++ ++
Sbjct: 30 LTINASNRDQAGSASSGRLRAEGRVPAVVYGKSKAPQNLSLDARELRILLRTIGNNTPVV 89
Query: 61 NLEIY-GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLN 119
L+ G+ +++ Q H K H DFQ V ++ I +++P+H I + VK
Sbjct: 90 QLKADDGEPRTSIIKEVQRHPIKDSYTHVDFQEVGADELIVLEIPVHPIGE--ADGVKNE 147
Query: 120 SCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
S I V + + CLPKN+P I+ ++ ++V S H+S + G+ + + E+
Sbjct: 148 SGTIETVSHTVSVRCLPKNIPASIDADVSALKVGDSFHVSQLPEMDGIEYLDAPEQ 203
>gi|328949924|ref|YP_004367259.1| 50S ribosomal protein L25 [Marinithermus hydrothermalis DSM 14884]
gi|328450248|gb|AEB11149.1| 50S ribosomal protein L25 [Marinithermus hydrothermalis DSM 14884]
Length = 209
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 102/189 (53%), Gaps = 13/189 (6%)
Query: 17 RNLRKIGKVPGIIYGGNKD-PVKISMNHNMIYHALKKETFHSSILNLEIY-GKVELVLLR 74
+ LR GK+PG++Y NK+ KI + N +K + H ++ LE+ G L+R
Sbjct: 16 KQLRAQGKLPGVLY--NKEINRKIYVELNEFDKVFRKASIHH-VITLELPDGTTYDTLVR 72
Query: 75 NFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISC 134
L ++ H DF V +++ + + VPL F+ + + V+L ++ V+ D+ +
Sbjct: 73 QLNLDKRRRRPEHVDF-FVLSDEPVEMYVPLKFVGT--AEGVRLGG-VLEQVLHDVLVRV 128
Query: 135 LPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAIIP--VNTLESD 192
P+N+P+FIE+++ + + S+HL+DI LP GV + S EE T+ T + P V LE+
Sbjct: 129 APRNIPEFIEVDVSGLGIGQSLHLADITLPEGVELAMSPEE--TVVTVVPPEDVEALEAA 186
Query: 193 NNSSIEKEK 201
+ E E+
Sbjct: 187 EVTEGEMEE 195
>gi|119961664|ref|YP_947125.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter
aurescens TC1]
gi|403526353|ref|YP_006661240.1| 50S ribosomal protein L25 [Arthrobacter sp. Rue61a]
gi|119948523|gb|ABM07434.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Arthrobacter
aurescens TC1]
gi|403228780|gb|AFR28202.1| 50S ribosomal protein L25 [Arthrobacter sp. Rue61a]
Length = 191
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 94/175 (53%), Gaps = 11/175 (6%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
K+ A R + G F+R R G++P +IYG +P+ I++ A++ +++L
Sbjct: 5 KLTAELRTEFGKGFARRARMAGQIPAVIYGHGAEPIHINLPGRATTLAVR---VSNALLA 61
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
+++ G+ L L+++ Q K+++ H D Q V +K+ V + +H ++ E++P
Sbjct: 62 IDVDGEQHLTLVKDIQRDPVKQIIEHVDLQTVKAGEKVTVDIAIH-VSGEVAP-----GA 115
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEED 176
+ S + + + ++P +E+ ++ ++ SIH SD+ LP+G +++ TE D
Sbjct: 116 VASLEATTVSLEAEATHVPTAVEVTIDGLKAGESIHASDLVLPKGSTLL--TEGD 168
>gi|225873665|ref|YP_002755124.1| 50S ribosomal protein L25 [Acidobacterium capsulatum ATCC 51196]
gi|225791486|gb|ACO31576.1| ribosomal protein L25, Ctc-form [Acidobacterium capsulatum ATCC
51196]
Length = 220
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 25 VPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYG-KVEL-VLLRNFQLHAYK 82
+P ++YG + P I ++ I L ET H+SI +LEI G K + ++ ++Q K
Sbjct: 30 IPAVVYGAAEPPQAIELDPKQITRILHSETGHNSIFDLEIGGVKTQTKAMIVDWQYEPIK 89
Query: 83 KLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVISDLYISCLPKNLPKF 142
++H D +R+ +K I V VP+ + + VK I+ V+ ++ + CLP ++P
Sbjct: 90 GNLIHIDLKRIALDKPIRVSVPVQLTGTPV--GVKTQGGILDQVLREVEVECLPNDIPSH 147
Query: 143 IEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIA 180
I++++ ++ T + ++D LP G + + ++E T+A
Sbjct: 148 IDVDITELAFGTILRVAD--LPHGDKLKYISDESNTVA 183
>gi|427736084|ref|YP_007055628.1| 50S ribosomal protein L25 [Rivularia sp. PCC 7116]
gi|427371125|gb|AFY55081.1| LSU ribosomal protein L25P [Rivularia sp. PCC 7116]
Length = 205
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 107/209 (51%), Gaps = 17/209 (8%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHSSI 59
M++ +K+ S ++ LR+ G++P +YG + + + + + L+K + ++++
Sbjct: 1 MEMTVECKKRPEGSKTKALRRSGEIPANLYGHQGTESISLVVETKTVERLLRKASVNNTL 60
Query: 60 LNLEIY-----GKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISP 114
++L++ G+ LLR Q H H F V K+ V+VP +++ +
Sbjct: 61 IDLKVADIPWEGQT---LLREVQAHPATGKPYHLSFFAVAGHGKMTVEVPFNYVGDSV-- 115
Query: 115 AVKLNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTE 174
VK I+ VI+ + ++CLP+N+P I+I++ + V S+H++ I LP+GV++ +E
Sbjct: 116 GVKQEGGILDTVITQMQLNCLPENIPDSIDIDVSNLHVGDSLHVNQIVLPKGVTLTAESE 175
Query: 175 EDPTIATAIIPVN---TLESDNNSSIEKE 200
E + +++P E + S E E
Sbjct: 176 E---LVVSVLPPQVSAATEDEGESEAEGE 201
>gi|395217681|ref|ZP_10401723.1| 50S ribosomal protein L25/general stress protein Ctc [Pontibacter
sp. BAB1700]
gi|394454890|gb|EJF09471.1| 50S ribosomal protein L25/general stress protein Ctc [Pontibacter
sp. BAB1700]
Length = 195
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 15/188 (7%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDP---VKISMNHNMIYHALKKETFHS 57
++II F+R G + ++ LR VPG++YGG + + +++Y E +
Sbjct: 4 LEIIGFKRANLGKAQTKELRNESYVPGVLYGGTEQVHFYAPAILFRDLVYSP---EVYE- 59
Query: 58 SILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVK 117
++L I G +L++ Q H +++LH DF ++ +K++ + VP+ F+ + SP V
Sbjct: 60 --VDLNIEGTHYRAILQDVQFHPVNEMLLHVDFLQLQEDKEVKIDVPVKFVGN--SPGVM 115
Query: 118 LNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDP 177
+ +++ + L I LP NLP +IE+N+ +E+ SI +S K+ +G I + P
Sbjct: 116 VGGKLVTK-LRKLKIKALPANLPDYIEVNISDLELGKSIKVS--KIAKGDYEILTNPLAP 172
Query: 178 TIATAIIP 185
+AT IP
Sbjct: 173 -VATVTIP 179
>gi|62185394|ref|YP_220179.1| 50S ribosomal protein L25 [Chlamydophila abortus S26/3]
gi|424825437|ref|ZP_18250424.1| 50S ribosomal protein L25 [Chlamydophila abortus LLG]
gi|81312456|sp|Q5L563.1|RL25_CHLAB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|62148461|emb|CAH64231.1| putative 50S ribosomal protein L25 [Chlamydophila abortus S26/3]
gi|333410536|gb|EGK69523.1| 50S ribosomal protein L25 [Chlamydophila abortus LLG]
Length = 185
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMI---YHALKKETFHS 57
M+++ R+ S + +R+ G +P +IY G K I ++ ++ +L+ S
Sbjct: 1 MELVVTSRETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFSKFLSSLESGALSS 60
Query: 58 SILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVK 117
+I +L G+ L+++ Q H V+H DF+ + ++ + +K+P+ IN+ VK
Sbjct: 61 TIFSLSYEGRTIKALVKDIQYHVTSYRVIHLDFEELIEDRDVKLKIPIRCINAVDCVGVK 120
Query: 118 LNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
L + VI L + C PK++ ++E+++ + ++ + LSDI++P G+ I +E
Sbjct: 121 LGGS-LRQVIRALRVVCKPKDIVPYLELDVRSLGLSQTRKLSDIQIPAGLRPITPLKE 177
>gi|302383773|ref|YP_003819596.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas
subvibrioides ATCC 15264]
gi|302194401|gb|ADL01973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas
subvibrioides ATCC 15264]
Length = 236
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R+ GT +R R+ G VPGI+YGG+K PV IS+N L ++ L+ +
Sbjct: 11 RENIGTGGARAARRSGAVPGILYGGDKAPVAISVNEKDFRKNLYTGKLLGHLVTLKYGDE 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
+ V+ ++ Q LH D RVD ++ I ++VP+HFIN + A + + V
Sbjct: 71 TQSVIAKDVQFDPVSDRPLHFDLMRVDAKQTIKIEVPIHFINEDQCKAFRQGGT-LEIVR 129
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGV 167
+ I ++P+ + ++L ++ ++ SD+K+P V
Sbjct: 130 HSVEILVRADHIPEDLVVDLAGHKLGDTLRWSDVKVPSDV 169
>gi|406987406|gb|EKE07766.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 188
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 1 MKIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKK---ETFHS 57
MK+ ER + LR+ G VP I+YG K +++ ++ + L+K +
Sbjct: 1 MKLKVEERTTGRKGVTSQLRREGMVPAILYGAGKAGTPVAVKNDTLKEILRKIQPGRLST 60
Query: 58 SILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVK 117
+I LE K ++++ Q H + H DF ++ K + + VP+ + + VK
Sbjct: 61 TIFELERGAKTIQAIIKDVQYHVASYEIEHVDFLEMEESKLVEINVPISLVGAADCAGVK 120
Query: 118 LNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLP 164
L I VI L +SCLPKN+P+ +++ + + S LSD+++P
Sbjct: 121 LGG-FIRQVIRSLKVSCLPKNIPESFSLDIRNVGIGQSKLLSDLEIP 166
>gi|332982255|ref|YP_004463696.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mahella
australiensis 50-1 BON]
gi|332699933|gb|AEE96874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mahella
australiensis 50-1 BON]
Length = 201
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
Query: 8 RKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEIYGK 67
R++ G+ + LR+ G +PG++YG + P+ + + + + K +++LNL I G+
Sbjct: 12 RQETGSGAAARLRRSGMIPGVVYGKSIAPINVKVPVKELREIISKHG-RNAVLNLNIEGQ 70
Query: 68 VELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCIISNVI 127
++++ Q H DFQ + + I KVP+ + ++ ++ +
Sbjct: 71 TLAAVIKDLQHDLMGTQYEHVDFQHILMNEVIKTKVPIRLQGEGL---IESKGGLVMLQL 127
Query: 128 SDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
+L + CLP +LP+ IEI++ MEV S+ ++DI +P V +I + +E
Sbjct: 128 DELDVECLPDSLPEVIEIDVSDMEVGQSLKVADINVPENVRIISNPDE 175
>gi|407275962|ref|ZP_11104432.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodococcus
sp. P14]
Length = 201
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 2 KIIAFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILN 61
+I A R + G +R R+ G+VP ++YG DP +S+ + A+ + +++L
Sbjct: 6 RIAAVVRTEFGKGAARRARRDGQVPAVLYGHGTDPQHLSLPARE-FAAVLRAHGTNAVLT 64
Query: 62 LEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSC 121
L++ G EL L ++ +H + + HAD V +K+ V+VPL + E + +
Sbjct: 65 LDVDGSEELALTKSVVVHPIRNYIEHADLLVVKKGEKVTVEVPL-VVTGEAA-----SGT 118
Query: 122 IISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSV 169
++ N +S + + NLP+ +E++++ +E T I +D++LP G ++
Sbjct: 119 LVVNEVSTVQLEADALNLPEQVEVSIDGVEAGTQILANDVQLPAGATL 166
>gi|402299311|ref|ZP_10818933.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
alcalophilus ATCC 27647]
gi|401725515|gb|EJS98793.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
alcalophilus ATCC 27647]
Length = 208
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 7/189 (3%)
Query: 5 AFERKKKGTSFSRNLRKIGKVPGIIYGGNKDPVKISMNHNMIYHALKKETFHSSILNLEI 64
A R+ S +R LRK G +PG++YG D +S+ ++ + +E + I +L++
Sbjct: 7 ANRRENLQGSTTRKLRKEGFLPGVLYGNKIDSQPVSV-ESVDFLKTVREVGKNGIFSLDV 65
Query: 65 -YGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVKLNSCII 123
GK V+L + Q K +HADF VD +I +V +H I SP I+
Sbjct: 66 DGGKKHQVMLYDLQTDPIKNEFVHADFFEVDMTSEIEAEVSIHLIGD--SPGANAGG-IV 122
Query: 124 SNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEEDPTIATAI 183
++++ + + CLP ++P+ IE+++ + + +I ++DI+ VSV E++ TI T
Sbjct: 123 AHMMHTVVVHCLPSDIPENIEVDISSLHIGDAIQIADIR--ERVSVDIKNEDEETIVTVQ 180
Query: 184 IPVNTLESD 192
P ++ D
Sbjct: 181 APAAEVDPD 189
>gi|167036980|ref|YP_001664558.1| 50S ribosomal protein L25/general stress protein Ctc
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167039691|ref|YP_001662676.1| 50S ribosomal protein L25/general stress protein Ctc
[Thermoanaerobacter sp. X514]
gi|256750623|ref|ZP_05491509.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter ethanolicus CCSD1]
gi|300915060|ref|ZP_07132375.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X561]
gi|307724983|ref|YP_003904734.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X513]
gi|320115398|ref|YP_004185557.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|226736371|sp|B0K775.1|RL25_THEP3 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736372|sp|B0K664.1|RL25_THEPX RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166853931|gb|ABY92340.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X514]
gi|166855814|gb|ABY94222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256750463|gb|EEU63481.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter ethanolicus CCSD1]
gi|300888784|gb|EFK83931.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X561]
gi|307582044|gb|ADN55443.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X513]
gi|319928489|gb|ADV79174.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 201
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Query: 1 MKIIAFE--RKKKGTSFSRNLRKIGKVPGIIYG-GNKDPVKISMNHNMIYHALKKETFHS 57
M+ ++ E ++ G + +R L+ G +P I+YG G + + +++ +N + L+K +
Sbjct: 1 MQSVSIEAIKRDTGKNAARRLKNQGYIPAILYGKGMAESIPLAVEYNKLQRLLQKHG-RN 59
Query: 58 SILNLEIYGKVELVLLRNFQLHAYKKLVLHADFQRVDTEKKIHVKVPLHFINSEISPAVK 117
+LN+ + G +++ Q K ++H DFQRV ++I VPL F E + ++
Sbjct: 60 VLLNVIVDGSTHNAVIKEIQEDTLKGKIIHVDFQRVSMYEEIEATVPLKF---EGTGLIE 116
Query: 118 LNSCIISNVISDLYISCLPKNLPKFIEINLEKMEVNTSIHLSDIKLPRGVSVIHSTEE 175
I+ + + +L + LP +P+ I ++L +E+ ++ + DI++P GV V+ +E
Sbjct: 117 SRGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFVKDIQVPEGVKVVDDPDE 174
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,034,567,715
Number of Sequences: 23463169
Number of extensions: 119099648
Number of successful extensions: 288626
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 960
Number of HSP's that attempted gapping in prelim test: 284090
Number of HSP's gapped (non-prelim): 2707
length of query: 205
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 69
effective length of database: 9,168,204,383
effective search space: 632606102427
effective search space used: 632606102427
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)