Your job contains 1 sequence.
>psy8564
MLPWQNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGL
GYYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGN
VKRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGSIICKKIKPKCK
VCPLQLCCISYKTNKINNFLIKNKKNIKNCSIIMFIVIDDDYVLFQKRSNKGIWGGLLSF
PEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKNYLILPIISHKLTHLQFKIVPCHI
FLKKCFLKENKNNFIWYPIKKIKNSPIPAPVRKILFQIIQR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8564
(341 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|SO_3368 - symbol:SO_3368 "A/G-specific adenine g... 489 1.4e-52 2
UNIPROTKB|P17802 - symbol:mutY "adenine glycosylase; G.C ... 499 9.8e-48 1
UNIPROTKB|Q9KUR3 - symbol:VC_0452 "A/G-specific adenine g... 496 2.0e-47 1
TIGR_CMR|VC_0452 - symbol:VC_0452 "A/G-specific adenine g... 496 2.0e-47 1
TIGR_CMR|CBU_0940 - symbol:CBU_0940 "A/G-specific adenine... 466 3.1e-44 1
TIGR_CMR|CPS_4148 - symbol:CPS_4148 "A/G-specific adenine... 434 7.5e-41 1
ZFIN|ZDB-GENE-081104-193 - symbol:mutyh "mutY homolog (E.... 341 3.3e-37 2
TIGR_CMR|BA_0522 - symbol:BA_0522 "A/G-specific adenine g... 347 2.4e-35 2
TIGR_CMR|SPO_3448 - symbol:SPO_3448 "A/G-specific adenine... 314 5.5e-32 2
MGI|MGI:1917853 - symbol:Mutyh "mutY homolog (E. coli)" s... 323 1.4e-31 2
RGD|620045 - symbol:Mutyh "mutY homolog (E. coli)" specie... 321 3.9e-31 2
UNIPROTKB|Q8R5G2 - symbol:Mutyh "A/G-specific adenine DNA... 321 3.9e-31 2
UNIPROTKB|E1BZT8 - symbol:MUTYH "Uncharacterized protein"... 318 4.8e-31 2
UNIPROTKB|F1P514 - symbol:MUTYH "Uncharacterized protein"... 318 4.8e-31 2
UNIPROTKB|Q9UIF7 - symbol:MUTYH "A/G-specific adenine DNA... 320 1.2e-30 2
UNIPROTKB|E5KP25 - symbol:MUTYH "A/G-specific adenine DNA... 320 1.3e-30 2
GENEDB_PFALCIPARUM|PF11_0306 - symbol:PF11_0306 "A/G-spec... 308 4.7e-30 2
UNIPROTKB|Q8II68 - symbol:PF11_0306 "A/G-specific adenine... 308 4.7e-30 2
UNIPROTKB|E2RG99 - symbol:MUTYH "Uncharacterized protein"... 319 1.7e-29 2
UNIPROTKB|F1S368 - symbol:MUTYH "Uncharacterized protein"... 306 5.5e-29 2
UNIPROTKB|Q5T413 - symbol:MUTYH "A/G-specific adenine DNA... 320 9.1e-29 1
UNIPROTKB|F1N4K4 - symbol:MUTYH "Uncharacterized protein"... 299 1.4e-28 2
DICTYBASE|DDB_G0270764 - symbol:myh "monofunctional DNA g... 319 4.9e-28 1
UNIPROTKB|E9PM53 - symbol:MUTYH "A/G-specific adenine DNA... 296 3.2e-26 1
TAIR|locus:2135828 - symbol:AT4G12740 species:3702 "Arabi... 192 5.3e-26 3
TIGR_CMR|CJE_1792 - symbol:CJE_1792 "A/G-specific adenine... 281 1.2e-24 1
TIGR_CMR|GSU_1613 - symbol:GSU_1613 "A/G-specific adenine... 268 2.9e-23 1
POMBASE|SPAC26A3.02 - symbol:myh1 "adenine DNA glycosylas... 245 4.3e-23 2
UNIPROTKB|O53574 - symbol:mutY "PROBABLE ADENINE GLYCOSYL... 227 6.5e-19 1
UNIPROTKB|Q5T418 - symbol:MUTYH "A/G-specific adenine DNA... 197 1.1e-15 1
TIGR_CMR|DET_0935 - symbol:DET_0935 "endonuclease III" sp... 143 4.1e-08 1
TIGR_CMR|CHY_1121 - symbol:CHY_1121 "endonuclease III" sp... 127 3.8e-06 1
TIGR_CMR|CJE_0698 - symbol:CJE_0698 "endonuclease III" sp... 112 0.00026 1
TIGR_CMR|BA_1570 - symbol:BA_1570 "endonuclease III" spec... 112 0.00029 1
TIGR_CMR|NSE_0246 - symbol:NSE_0246 "endonuclease III" sp... 110 0.00050 1
>TIGR_CMR|SO_3368 [details] [associations]
symbol:SO_3368 "A/G-specific adenine glycosylase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744
OMA:FHLDIQP HSSP:P17802 RefSeq:NP_718922.1
ProteinModelPortal:Q8EBX7 SMR:Q8EBX7 GeneID:1171048
KEGG:son:SO_3368 PATRIC:23526410 ProtClustDB:CLSK907131
Uniprot:Q8EBX7
Length = 365
Score = 489 (177.2 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 100/243 (41%), Positives = 141/243 (58%)
Query: 2 LPWQNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLG 61
LPWQ K Y +W+SEIMLQQTQV TVIPYYQRF+++FPN+++LA A + V+ W+GLG
Sbjct: 23 LPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMQRFPNVLALANAPDDEVLHHWTGLG 82
Query: 62 YYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNV 121
YY+RARNLH AK++ +Y G FP +F ++ LPGIG+STA A+ + G+ + ILDGNV
Sbjct: 83 YYARARNLHKAAKMIRDEYQGQFPTDFEQVLALPGIGRSTAGAVLSLSLGQHHPILDGNV 142
Query: 122 KRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGSXXXXXXXXXXXX 181
KR+L R I K +E++LW+ L P+++I+ Y Q +MD G+
Sbjct: 143 KRVLARHGAIEGWPGQKPVEERLWQLTEQLTPQQDIQKYNQAMMDIGASICTRSKPNCAA 202
Query: 182 XXLQLCCISYXXXXXXXXXXXXXXXXXXXXXX-MFIVIDDDYVLFQKRSNKGIWGGLLSF 240
+ + C + M ++ D+ V KR GIWGGL F
Sbjct: 203 CPVAVDCKAQLMGRQTDFPGKKPKKTIPEKSAWMLVLFKDNQVFLAKRPPAGIWGGLWCF 262
Query: 241 PEW 243
PE+
Sbjct: 263 PEF 265
Score = 73 (30.8 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 34/131 (25%), Positives = 52/131 (39%)
Query: 214 MFIVIDDDYVLFQKRSNKGIWGGLLSFPEWILKDKIINFVDNNLKNLIELEIKKFISSFG 273
M ++ D+ V KR GIWGGL FPE+ + +N ELE + G
Sbjct: 236 MLVLFKDNQVFLAKRPPAGIWGGLWCFPEFS-SEAALN---------TELEAQ------G 279
Query: 274 FIKNYLILPIIS--HKLTHLQFKIVPCHIFLKKCFLKE-------NKNNFIWYPIKKIKN 324
+ L P+I H +H I P + L K + +N +WY I +
Sbjct: 280 YQPTQLE-PLIGFRHTFSHFHLDIQPMLLDLDKWASGKPSVGAIMEQNQSLWYNINQPSK 338
Query: 325 SPIPAPVRKIL 335
+ A ++L
Sbjct: 339 VGLAAATERVL 349
>UNIPROTKB|P17802 [details] [associations]
symbol:mutY "adenine glycosylase; G.C --> T.A
transversions" species:83333 "Escherichia coli K-12" [GO:0019104
"DNA N-glycosylase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016798 "hydrolase activity, acting on
glycosyl bonds" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA;IDA] [GO:0006284 "base-excision repair"
evidence=IEA;IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 GO:GO:0016787 DrugBank:DB00173
EMBL:U28377 GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 EMBL:X52391 EMBL:M59471 PIR:B38535
RefSeq:NP_417436.1 RefSeq:YP_491160.1 PDB:1KG2 PDB:1KG3 PDB:1KG4
PDB:1KG5 PDB:1KG6 PDB:1KG7 PDB:1KQJ PDB:1MUD PDB:1MUN PDB:1MUY
PDB:1WEF PDB:1WEG PDB:1WEI PDBsum:1KG2 PDBsum:1KG3 PDBsum:1KG4
PDBsum:1KG5 PDBsum:1KG6 PDBsum:1KG7 PDBsum:1KQJ PDBsum:1MUD
PDBsum:1MUN PDBsum:1MUY PDBsum:1WEF PDBsum:1WEG PDBsum:1WEI
ProteinModelPortal:P17802 SMR:P17802 DIP:DIP-10289N IntAct:P17802
MINT:MINT-1240449 PRIDE:P17802 EnsemblBacteria:EBESCT00000003975
EnsemblBacteria:EBESCT00000004732 EnsemblBacteria:EBESCT00000004734
EnsemblBacteria:EBESCT00000004736 EnsemblBacteria:EBESCT00000018160
EnsemblBacteria:EBESCT00000232596 EnsemblBacteria:EBESCT00000232600
GeneID:12933365 GeneID:947447 KEGG:ecj:Y75_p2891 KEGG:eco:b2961
PATRIC:32121336 EchoBASE:EB0622 EcoGene:EG10627
HOGENOM:HOG000028744 OMA:FHLDIQP ProtClustDB:PRK10880
BioCyc:EcoCyc:EG10627-MONOMER BioCyc:ECOL316407:JW2928-MONOMER
EvolutionaryTrace:P17802 Genevestigator:P17802 Uniprot:P17802
Length = 350
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 117/338 (34%), Positives = 173/338 (51%)
Query: 2 LPWQNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLG 61
LPWQ K Y +WLSE+MLQQTQV TVIPY++RF+ +FP + LA A L+ V+ LW+GLG
Sbjct: 22 LPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLG 81
Query: 62 YYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNV 121
YY+RARNLH A+ V + G FP+ F + LPG+G+STA AI + GK ILDGNV
Sbjct: 82 YYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNV 141
Query: 122 KRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGSXXXXXXXXXXXX 181
KR+L R ++ K +E KLW + + P +E + Q +MD G+
Sbjct: 142 KRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSL 201
Query: 182 XXLQLCCISYXXXXXXXXXXXXXXXXXXXXXXMFIVID-DDYVLFQKRSNKGIWGGLLSF 240
LQ CI+ F+++ +D VL +R G+WGGL F
Sbjct: 202 CPLQNGCIAAANNSWALYPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCF 261
Query: 241 PEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKNYLILPIISHKLTHLQFKIVPCHI 300
P+ F D ++L + ++ I++ N L H +H IVP +
Sbjct: 262 PQ---------FADE--ESLRQWLAQRQIAA----DNLTQLTAFRHTFSHFHLDIVPMWL 306
Query: 301 FLKKCFLKENKNNFIWYPIKKIKNSPIPAPVRKILFQI 338
+ ++ N +WY + + + + APV ++L Q+
Sbjct: 307 PVSSFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQL 344
>UNIPROTKB|Q9KUR3 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 117/337 (34%), Positives = 170/337 (50%)
Query: 2 LPWQNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLG 61
LPWQ KN Y +WLSEIMLQQTQV TVIPY++RFL++FP + +LA A + V+ W+GLG
Sbjct: 20 LPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLG 79
Query: 62 YYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNV 121
YY+RARNLH A++V +Y G FP + + LPG+G+STA+A+ Y K +AILDGNV
Sbjct: 80 YYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNV 139
Query: 122 KRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGSXXXXXXXXXXXX 181
KR L R + K +E +LW YA PK +++ Y Q +MD G+
Sbjct: 140 KRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSL 199
Query: 182 XXLQLCCISYXXXXXXXXXXXXXXXXXXXXXXMFIVI-DDDYVLFQKRSNKGIWGGLLSF 240
++ C++ F+++ D+ V ++R GIWGGL F
Sbjct: 200 CPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVWLEQRPQSGIWGGLYCF 259
Query: 241 PEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKNYLILPIISHKLTHLQFKIVPCHI 300
P+ +I N I+ I + I + L H +H I P +
Sbjct: 260 PQ----SEIAN---------IQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDITPILL 306
Query: 301 FL--KKCFLKENKNNFIWYPIKKIKNSPIPAPVRKIL 335
L K + E +WY + + APV+++L
Sbjct: 307 QLSRKPDIVMEGSKG-LWYNLSHPDEIGLAAPVKQLL 342
>TIGR_CMR|VC_0452 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 117/337 (34%), Positives = 170/337 (50%)
Query: 2 LPWQNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLG 61
LPWQ KN Y +WLSEIMLQQTQV TVIPY++RFL++FP + +LA A + V+ W+GLG
Sbjct: 20 LPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLG 79
Query: 62 YYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNV 121
YY+RARNLH A++V +Y G FP + + LPG+G+STA+A+ Y K +AILDGNV
Sbjct: 80 YYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNV 139
Query: 122 KRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGSXXXXXXXXXXXX 181
KR L R + K +E +LW YA PK +++ Y Q +MD G+
Sbjct: 140 KRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSL 199
Query: 182 XXLQLCCISYXXXXXXXXXXXXXXXXXXXXXXMFIVI-DDDYVLFQKRSNKGIWGGLLSF 240
++ C++ F+++ D+ V ++R GIWGGL F
Sbjct: 200 CPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVWLEQRPQSGIWGGLYCF 259
Query: 241 PEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKNYLILPIISHKLTHLQFKIVPCHI 300
P+ +I N I+ I + I + L H +H I P +
Sbjct: 260 PQ----SEIAN---------IQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDITPILL 306
Query: 301 FL--KKCFLKENKNNFIWYPIKKIKNSPIPAPVRKIL 335
L K + E +WY + + APV+++L
Sbjct: 307 QLSRKPDIVMEGSKG-LWYNLSHPDEIGLAAPVKQLL 342
>TIGR_CMR|CBU_0940 [details] [associations]
symbol:CBU_0940 "A/G-specific adenine glycosylase"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00278 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004519 GO:GO:0019104
KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 OMA:FHLDIQP
HSSP:P17802 RefSeq:NP_819952.1 ProteinModelPortal:Q83D07 SMR:Q83D07
GeneID:1208834 KEGG:cbu:CBU_0940 PATRIC:17930589
ProtClustDB:CLSK914429 BioCyc:CBUR227377:GJ7S-932-MONOMER
Uniprot:Q83D07
Length = 354
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 116/344 (33%), Positives = 172/344 (50%)
Query: 2 LPWQNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLG 61
LPWQ Y +W+SEIMLQQTQV+TVIPY++RF+K+FP + +LA A L+ ++ WSGLG
Sbjct: 22 LPWQKKLTPYRVWVSEIMLQQTQVSTVIPYFERFIKRFPTVGALALAPLDEILAHWSGLG 81
Query: 62 YYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNV 121
YY+RARNLH A+++ Y+G FP +L +LPGIG+STA A+ + ILDGNV
Sbjct: 82 YYARARNLHRAAQIIHVTYHGRFPSTVETLSSLPGIGRSTAGAVLSLGMHQYAVILDGNV 141
Query: 122 KRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGSXXXXXXXXXXXX 181
KR+L R ++ +N + LW A PK Y Q +MD G+
Sbjct: 142 KRVLARYNALDVPINQQVGINILWSLAEKYTPKNRCWDYNQAMMDIGAMICTRTKPKCSL 201
Query: 182 XXLQLCCISYXXXXXXXXXXXXXXXXXXXXXXMFIVIDDDY--VLFQKRSNKGIWGGLLS 239
L+ C ++ +++ + +L +KR GIWGGL S
Sbjct: 202 CPLKSSCKAHRLSQQMNFPIKKAKTARAQKAAYLLLLRNSRGEILLEKRPPTGIWGGLWS 261
Query: 240 FPEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKNYLILPIISHKLTHLQFKIVPC- 298
FP+ +++ I + L E I + +S I H+ +H +F+I P
Sbjct: 262 FPQCPIEEDIDKWCQTKLG--FEAVICERWNS------------IFHQFSHFEFEIKPVL 307
Query: 299 -HIFLKKCFLKENKNNFIWYPIKKIKNSPIPAPVRKILFQIIQR 341
I ++ + E IWY I APV ++L Q+ Q+
Sbjct: 308 LQIETRQPRMMECPPQ-IWYKEHSALPGGIAAPVARLLKQLTQQ 350
>TIGR_CMR|CPS_4148 [details] [associations]
symbol:CPS_4148 "A/G-specific adenine glycosylase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 RefSeq:YP_270802.1
ProteinModelPortal:Q47WM0 SMR:Q47WM0 STRING:Q47WM0 GeneID:3522464
KEGG:cps:CPS_4148 PATRIC:21471157 OMA:LPWRETY
BioCyc:CPSY167879:GI48-4160-MONOMER Uniprot:Q47WM0
Length = 362
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 122/344 (35%), Positives = 174/344 (50%)
Query: 2 LPWQNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLG 61
LPWQ K Y +W+SEIMLQQTQV TVIPYYQRF++ FP I LA A + V+ W+GLG
Sbjct: 31 LPWQQDKTPYRVWISEIMLQQTQVATVIPYYQRFMESFPTITDLANADEDVVLHHWTGLG 90
Query: 62 YYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNV 121
YY+RARNLH AK++ Y+G FP +I LPGIG+STA AI + + + ILDGNV
Sbjct: 91 YYARARNLHKSAKIMLNDYDGHFPIEIEQVIALPGIGRSTAGAILSLSLKQYHPILDGNV 150
Query: 122 KRILIR---VLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGSXXXXXXXXX 178
KR+L R V G N L+ KF +K LW+ + L P + + Q +MD G+
Sbjct: 151 KRVLARSYLVEGYN-GLS-KF-DKALWQLSEKLTPAIETDSFNQAMMDLGATVCTRSKPS 207
Query: 179 XXXXXLQLCCISYXXXXXXXXXXXXXXXXXXXXXXMFIVI-----DDDYVLFQKRSNKGI 233
++ C++ + ++ + D VL +KR GI
Sbjct: 208 CDICPVEQSCLAKAGDQQMNFPQKKPKKKIPEKQTIMVIPRLKNENCDKVLMEKRPPVGI 267
Query: 234 WGGLLSFPEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKNYLILPIISHKLTHLQF 293
WGGL F E D++ N+L + L +K+ ISS L H +H
Sbjct: 268 WGGLWCFHE---VDELSEI--NDL--MTSLSLKE-ISS-------QTLTEFRHTFSHFHL 312
Query: 294 KIVPCHIFLKKCFL-KENK-NNFIWYPIKKIKNSPIPAPVRKIL 335
I P + ++ + K N+ N WY + + + + A +K+L
Sbjct: 313 DITPVVVDCQQLEVSKINEPNQQKWYDLHQGLSVGLAASTQKLL 356
>ZFIN|ZDB-GENE-081104-193 [details] [associations]
symbol:mutyh "mutY homolog (E. coli)" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 ZFIN:ZDB-GENE-081104-193 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0004519 KO:K03575 CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540
OrthoDB:EOG4HX50Q GeneTree:ENSGT00510000047220 HOGENOM:HOG000028743
OMA:HLGEVVH EMBL:CT025742 IPI:IPI00900622 RefSeq:XP_686698.2
UniGene:Dr.74965 STRING:B8JJK1 Ensembl:ENSDART00000114177
GeneID:558403 KEGG:dre:558403 NextBio:20882452 Uniprot:B8JJK1
Length = 526
Score = 341 (125.1 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 72/161 (44%), Positives = 98/161 (60%)
Query: 10 TYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRARNL 69
TY +W+SEIMLQQTQV TVI YY R++K++P + LA A LE V ++WSGLGYYSR R L
Sbjct: 90 TYAVWVSEIMLQQTQVATVIDYYNRWMKRWPTVEKLAAATLEEVNQMWSGLGYYSRGRRL 149
Query: 70 HICAKLVFFKYNGIFPKNFISLIN-LPGIGQSTASAIRVFAYGKRNAILDGNVKRILIRV 128
H A+ V + +G PK L+ LPG+G+ TA AI A G+ +DGNV R+L RV
Sbjct: 150 HEGAQKVVSELDGQMPKTTAGLLKQLPGVGRYTAGAIGSIALGQVTGAVDGNVIRVLCRV 209
Query: 129 LGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
I + + LWR A L+ + + Q +M+ G+
Sbjct: 210 RAIGADSSSPAVTDALWRIADALVDPERPGDFNQAMMELGA 250
Score = 80 (33.2 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 24/117 (20%), Positives = 53/117 (45%)
Query: 219 DDDYVLFQKRSNKGIWGGLLSFPEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKNY 278
+ +Y+L Q R +KG+ G+ P +L+ I +N K LI ++K++ + +
Sbjct: 354 ESEYLLTQ-RPSKGLLAGMWELPSVLLQADIS---ENKYKELICDMMQKWLETPLDTHSV 409
Query: 279 LILPIISHKLTHLQFKIVPCHIFLKKCFLKENKNNFIWYPIKKIKNSPIPAPVRKIL 335
+ + H +H+ + + + C +E K W ++ + + V+KI+
Sbjct: 410 QFVGEVVHIFSHIHQTYIVFSVHVSDCSDREQKQKTCWLTKSALQKAAVSTGVKKIM 466
>TIGR_CMR|BA_0522 [details] [associations]
symbol:BA_0522 "A/G-specific adenine glycosylase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005760
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
HSSP:P17802 OMA:QAVKPYF RefSeq:NP_843058.1 RefSeq:YP_017141.1
RefSeq:YP_026771.1 ProteinModelPortal:Q81YV8 SMR:Q81YV8
DNASU:1087779 EnsemblBacteria:EBBACT00000010013
EnsemblBacteria:EBBACT00000017545 EnsemblBacteria:EBBACT00000019690
GeneID:1087779 GeneID:2817839 GeneID:2853132 KEGG:ban:BA_0522
KEGG:bar:GBAA_0522 KEGG:bat:BAS0491 ProtClustDB:CLSK886914
BioCyc:BANT260799:GJAJ-534-MONOMER
BioCyc:BANT261594:GJ7F-559-MONOMER Uniprot:Q81YV8
Length = 365
Score = 347 (127.2 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 72/169 (42%), Positives = 101/169 (59%)
Query: 2 LPWQNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLG 61
LPW+ K+ Y +W+SEIMLQQT+V V PYY F+ KFP + +LA A E V++ W GLG
Sbjct: 29 LPWRKNKDPYRVWVSEIMLQQTRVEAVKPYYANFMGKFPTLEALANADDEEVLKAWEGLG 88
Query: 62 YYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNV 121
YYSRARNLH K V Y GI P + + L G+G T AI AYG +DGNV
Sbjct: 89 YYSRARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGPYTKGAILSIAYGIPEPAVDGNV 148
Query: 122 KRILIRVLGINCSLNIKFIEKKLWRYAI-DLLPKKNIEIYTQGLMDFGS 169
R+L R+L + + K +K++ + +++ +N + QGLM+ G+
Sbjct: 149 VRVLSRILSVWDDI-AKPKTRKVFEEIVREIISAENPSYFNQGLMELGA 196
Score = 51 (23.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 219 DDDYVLFQKRSNKGIWGGLLSFPEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKNY 278
D YV+ KR + G+ + FP L + I N + LI+ +KF S I+ Y
Sbjct: 249 DGRYVI-NKRPSTGLLANMWEFPNVELGEGI----RNQKEQLIDYMKEKFELSIS-IEEY 302
Query: 279 LILPIISHKLTHLQFKI 295
+ + H TH + I
Sbjct: 303 AMN--VQHTFTHRTWDI 317
>TIGR_CMR|SPO_3448 [details] [associations]
symbol:SPO_3448 "A/G-specific adenine glycosylase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004844 "uracil DNA
N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 GO:GO:0004519 GO:GO:0019104 KO:K03575
HOGENOM:HOG000028743 TIGRFAMs:TIGR01084 RefSeq:YP_168644.1
ProteinModelPortal:Q5LMW4 GeneID:3195498 KEGG:sil:SPO3448
PATRIC:23380357 OMA:QAVKPYF ProtClustDB:CLSK934171 Uniprot:Q5LMW4
Length = 351
Score = 314 (115.6 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 68/160 (42%), Positives = 98/160 (61%)
Query: 11 YYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRARNLH 70
Y +WLSE+MLQQT V V Y+ RF ++P + +LA A E VM W+GLGYY+RARNL
Sbjct: 42 YRVWLSEVMLQQTTVAAVRDYFHRFTARWPTVAALAAAPDEAVMGEWAGLGYYARARNLL 101
Query: 71 ICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNVKRILIRVLG 130
CA+ V ++ G FP ++ LI LPGIG TA+AI A+ + +LDGNV+R++ R+
Sbjct: 102 KCARAVSEEHGGQFPDSYEGLIALPGIGPYTAAAIAAIAFDRAETVLDGNVERVMARLYD 161
Query: 131 INCSL-NIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
+ L +K + K+ +A L P + Q +MD G+
Sbjct: 162 VQEPLPGVKPVLKE---HAAALTPTARPGDHAQAVMDLGA 198
Score = 52 (23.4 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 224 LFQKRSNKGIWGGLLSFP--EW 243
L ++R +KG+ GG+L +P +W
Sbjct: 255 LLERRPDKGLLGGMLGWPGSDW 276
>MGI|MGI:1917853 [details] [associations]
symbol:Mutyh "mutY homolog (E. coli)" species:10090 "Mus
musculus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=ISO] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISO;TAS] [GO:0032407 "MutSalpha complex binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
MGI:MGI:1917853 GO:GO:0005739 GO:GO:0005634 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0006281
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GO:GO:0019104 KO:K03575 CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540
OrthoDB:EOG4HX50Q EMBL:AY007717 EMBL:AB117938 EMBL:AL683847
EMBL:BC057942 IPI:IPI00620073 RefSeq:NP_001153053.1
RefSeq:NP_573513.2 UniGene:Mm.180333 ProteinModelPortal:Q99P21
SMR:Q99P21 STRING:Q99P21 PhosphoSite:Q99P21 PRIDE:Q99P21
Ensembl:ENSMUST00000102699 GeneID:70603 KEGG:mmu:70603
GeneTree:ENSGT00510000047220 HOGENOM:HOG000028743 InParanoid:A2AGE3
OMA:HLGEVVH NextBio:331956 Bgee:Q99P21 CleanEx:MM_MUTYH
Genevestigator:Q99P21 GermOnline:ENSMUSG00000028687 Uniprot:Q99P21
Length = 515
Score = 323 (118.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 71/177 (40%), Positives = 98/177 (55%)
Query: 2 LPWQNT--------KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENV 53
LPW+N + Y +W+SE+MLQQTQV TVI YY R+++K+P + LA A LE V
Sbjct: 82 LPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYTRWMQKWPKLQDLASASLEEV 141
Query: 54 MELWSGLGYYSRARNLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGK 112
+LWSGLGYYSR R L A+ V + G P+ +L L PG+G+ TA AI A+ +
Sbjct: 142 NQLWSGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFDQ 201
Query: 113 RNAILDGNVKRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
++DGNV R+L RV I + LW A L+ + Q M+ G+
Sbjct: 202 VTGVVDGNVLRVLCRVRAIGADPTSTLVSHHLWNLAQQLVDPARPGDFNQAAMELGA 258
Score = 46 (21.3 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 223 VLFQKRSNKGIWGGLLSFPEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIK-NYL-- 279
VL +R + G+ GL FP L+ + K L++ E++++ I+ +L
Sbjct: 356 VLLVQRPDSGLLAGLWEFPSVTLEPS----EQHQHKALLQ-ELQRWCGPLPAIRLQHLGE 410
Query: 280 ILPIISH-KLTHLQFKI 295
++ I SH KLT+ + +
Sbjct: 411 VIHIFSHIKLTYQVYSL 427
>RGD|620045 [details] [associations]
symbol:Mutyh "mutY homolog (E. coli)" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005739
"mitochondrion" evidence=IEA;ISO;IDA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IDA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA;IDA] [GO:0032407 "MutSalpha complex binding"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0032405 "MutLalpha complex binding" evidence=ISO] [GO:0032406
"MutLbeta complex binding" evidence=ISO] [GO:0032408 "MutSbeta
complex binding" evidence=ISO] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
RGD:620045 GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 321 (118.1 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 68/163 (41%), Positives = 94/163 (57%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SE+MLQQTQV TVI YY R+++K+P + LA A LE V +LWSGLGYYSR R
Sbjct: 96 RRAYAVWVSEVMLQQTQVATVIDYYTRWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGR 155
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ +L L PG+G+ TA AI A+ + ++DGNV R+L
Sbjct: 156 RLQEGARKVVEELGGHVPRTAETLQQLLPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLC 215
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
RV I F+ LW A L+ + Q M+ G+
Sbjct: 216 RVRAIGADPTSSFVSHHLWDLAQQLVDPARPGDFNQAAMELGA 258
Score = 44 (20.5 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 223 VLFQKRSNKGIWGGLLSFPEWILK 246
+L +R N G+ GL FP L+
Sbjct: 356 ILLVQRPNSGLLAGLWEFPSVTLE 379
>UNIPROTKB|Q8R5G2 [details] [associations]
symbol:Mutyh "A/G-specific adenine DNA glycosylase"
species:10116 "Rattus norvegicus" [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] InterPro:IPR000086 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893 PROSITE:PS01155
PROSITE:PS51462 SMART:SM00478 SMART:SM00525 RGD:620045
GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 321 (118.1 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 68/163 (41%), Positives = 94/163 (57%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SE+MLQQTQV TVI YY R+++K+P + LA A LE V +LWSGLGYYSR R
Sbjct: 96 RRAYAVWVSEVMLQQTQVATVIDYYTRWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGR 155
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ +L L PG+G+ TA AI A+ + ++DGNV R+L
Sbjct: 156 RLQEGARKVVEELGGHVPRTAETLQQLLPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLC 215
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
RV I F+ LW A L+ + Q M+ G+
Sbjct: 216 RVRAIGADPTSSFVSHHLWDLAQQLVDPARPGDFNQAAMELGA 258
Score = 44 (20.5 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 223 VLFQKRSNKGIWGGLLSFPEWILK 246
+L +R N G+ GL FP L+
Sbjct: 356 ILLVQRPNSGLLAGLWEFPSVTLE 379
>UNIPROTKB|E1BZT8 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00595820
ProteinModelPortal:E1BZT8 Ensembl:ENSGALT00000016624 Uniprot:E1BZT8
Length = 461
Score = 318 (117.0 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 67/163 (41%), Positives = 97/163 (59%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SEIMLQQTQV TVI YY R+++K+P + +LA A LE V ELW+GLGYYSR +
Sbjct: 87 RRAYAVWVSEIMLQQTQVATVIDYYNRWMQKWPTLQALAAASLEEVNELWAGLGYYSRGK 146
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ L L PG+G+ TA AI ++G+ ++DGNV R+L
Sbjct: 147 RLQEAARKVVSELAGRMPRTAEDLQRLLPGVGRYTAGAIASISFGQATGVVDGNVIRVLC 206
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
R+ I + + LW A L+ + + Q LM+ G+
Sbjct: 207 RLRCIGADTSSLAVIDCLWDMANTLVDRSRPGDFNQALMELGA 249
Score = 39 (18.8 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 221 DYVLFQKRSNKGIWGGLLSFP 241
+Y++ Q+ S+ G+ GL FP
Sbjct: 351 EYLIVQRPSS-GLLAGLWEFP 370
>UNIPROTKB|F1P514 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00821549
Ensembl:ENSGALT00000038451 Uniprot:F1P514
Length = 398
Score = 318 (117.0 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 67/163 (41%), Positives = 97/163 (59%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SEIMLQQTQV TVI YY R+++K+P + +LA A LE V ELW+GLGYYSR +
Sbjct: 41 RRAYAVWVSEIMLQQTQVATVIDYYNRWMQKWPTLQALAAASLEEVNELWAGLGYYSRGK 100
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ L L PG+G+ TA AI ++G+ ++DGNV R+L
Sbjct: 101 RLQEAARKVVSELAGRMPRTAEDLQRLLPGVGRYTAGAIASISFGQATGVVDGNVIRVLC 160
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
R+ I + + LW A L+ + + Q LM+ G+
Sbjct: 161 RLRCIGADTSSLAVIDCLWDMANTLVDRSRPGDFNQALMELGA 203
Score = 39 (18.8 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 221 DYVLFQKRSNKGIWGGLLSFP 241
+Y++ Q+ S+ G+ GL FP
Sbjct: 305 EYLIVQRPSS-GLLAGLWEFP 324
>UNIPROTKB|Q9UIF7 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=TAS] [GO:0032405 "MutLalpha complex binding"
evidence=IDA] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0032408 "MutSbeta complex binding" evidence=IDA] [GO:0032406
"MutLbeta complex binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006284 "base-excision
repair" evidence=TAS] [GO:0006285 "base-excision repair, AP site
formation" evidence=TAS] [GO:0045007 "depurination" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] Reactome:REACT_216
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005654 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0045007 EMBL:CH471059 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0006298 GO:GO:0004519 MIM:613659 GO:GO:0016798
GO:GO:0032407 Orphanet:26106 EMBL:AL359540 KO:K03575 EMBL:U63329
EMBL:AB032920 EMBL:AB032921 EMBL:AB032922 EMBL:AB032923
EMBL:AB032924 EMBL:AB032925 EMBL:AB032926 EMBL:AB032927
EMBL:AB032928 EMBL:AB032929 EMBL:HQ205466 EMBL:HQ205468
EMBL:HQ205469 EMBL:HQ205470 EMBL:HQ205472 EMBL:HQ205473
EMBL:HQ205474 EMBL:HQ205475 EMBL:HQ205476 EMBL:HQ205477
EMBL:HQ205479 EMBL:HQ205480 EMBL:HQ205481 EMBL:HQ205482
EMBL:HQ205483 EMBL:HQ205484 EMBL:HQ205485 EMBL:HQ205486
EMBL:HQ205487 EMBL:HQ205488 EMBL:HQ205489 EMBL:HQ205490
EMBL:HQ205491 EMBL:HQ205492 EMBL:HQ205493 EMBL:HQ205494
EMBL:HQ205495 EMBL:HQ205496 EMBL:HQ205497 EMBL:HQ205498
EMBL:HQ205499 EMBL:HQ205500 EMBL:HQ205501 EMBL:HQ205502
EMBL:HQ205503 EMBL:HQ205505 EMBL:AF527839 EMBL:BC003178
IPI:IPI00414235 IPI:IPI00414236 IPI:IPI00414237 IPI:IPI00456700
IPI:IPI00746950 IPI:IPI00844241 RefSeq:NP_001041636.1
RefSeq:NP_001041637.1 RefSeq:NP_001041638.1 RefSeq:NP_001041639.1
RefSeq:NP_001121897.1 RefSeq:NP_036354.1 UniGene:Hs.271353 PDB:1X51
PDB:3N5N PDBsum:1X51 PDBsum:3N5N ProteinModelPortal:Q9UIF7
SMR:Q9UIF7 DIP:DIP-41972N IntAct:Q9UIF7 STRING:Q9UIF7
PhosphoSite:Q9UIF7 DMDM:48428272 PRIDE:Q9UIF7
Ensembl:ENST00000354383 Ensembl:ENST00000355498
Ensembl:ENST00000372098 Ensembl:ENST00000372100
Ensembl:ENST00000372104 Ensembl:ENST00000372110
Ensembl:ENST00000372115 Ensembl:ENST00000448481
Ensembl:ENST00000456914 GeneID:4595 KEGG:hsa:4595 UCSC:uc001cnf.3
UCSC:uc001cng.3 UCSC:uc001cnn.3 CTD:4595 GeneCards:GC01M045794
HGNC:HGNC:7527 HPA:HPA008732 MIM:604933 MIM:608456
neXtProt:NX_Q9UIF7 Orphanet:733 Orphanet:247798 PharmGKB:PA31328
eggNOG:COG1194 HOVERGEN:HBG052540 InParanoid:Q9UIF7
OrthoDB:EOG4HX50Q EvolutionaryTrace:Q9UIF7 GenomeRNAi:4595
NextBio:17664 ArrayExpress:Q9UIF7 Bgee:Q9UIF7 CleanEx:HS_MUTYH
Genevestigator:Q9UIF7 GermOnline:ENSG00000132781 Uniprot:Q9UIF7
Length = 546
Score = 320 (117.7 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 66/163 (40%), Positives = 96/163 (58%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SE+MLQQTQV TVI YY +++K+P + LA A LE V +LW+GLGYYSR R
Sbjct: 122 RRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGR 181
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ +L L PG+G+ TA AI A+G+ ++DGNV R+L
Sbjct: 182 RLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLC 241
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
RV I + + ++LW A L+ + Q M+ G+
Sbjct: 242 RVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGA 284
Score = 43 (20.2 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 223 VLFQKRSNKGIWGGLLSFP 241
+L +R N G+ GL FP
Sbjct: 384 ILLVQRPNSGLLAGLWEFP 402
>UNIPROTKB|E5KP25 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155 PROSITE:PS51462
SMART:SM00478 SMART:SM00525 GO:GO:0005634 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0004519 EMBL:AL359540 KO:K03575 EMBL:HQ205466 EMBL:HQ205468
EMBL:HQ205469 EMBL:HQ205470 EMBL:HQ205472 EMBL:HQ205473
EMBL:HQ205474 EMBL:HQ205475 EMBL:HQ205476 EMBL:HQ205477
EMBL:HQ205479 EMBL:HQ205480 EMBL:HQ205481 EMBL:HQ205482
EMBL:HQ205483 EMBL:HQ205484 EMBL:HQ205485 EMBL:HQ205486
EMBL:HQ205487 EMBL:HQ205488 EMBL:HQ205489 EMBL:HQ205490
EMBL:HQ205491 EMBL:HQ205492 EMBL:HQ205493 EMBL:HQ205494
EMBL:HQ205495 EMBL:HQ205496 EMBL:HQ205497 EMBL:HQ205498
EMBL:HQ205499 EMBL:HQ205500 EMBL:HQ205501 EMBL:HQ205502
EMBL:HQ205503 EMBL:HQ205505 IPI:IPI00414236 RefSeq:NP_001121897.1
UniGene:Hs.271353 GeneID:4595 KEGG:hsa:4595 CTD:4595 HGNC:HGNC:7527
GenomeRNAi:4595 NextBio:17664 OMA:HLGEVVH SMR:E5KP25
Ensembl:ENST00000450313 UCSC:uc009vxp.3 Uniprot:E5KP25
Length = 549
Score = 320 (117.7 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 66/163 (40%), Positives = 96/163 (58%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SE+MLQQTQV TVI YY +++K+P + LA A LE V +LW+GLGYYSR R
Sbjct: 125 RRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGR 184
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ +L L PG+G+ TA AI A+G+ ++DGNV R+L
Sbjct: 185 RLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLC 244
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
RV I + + ++LW A L+ + Q M+ G+
Sbjct: 245 RVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGA 287
Score = 43 (20.2 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 223 VLFQKRSNKGIWGGLLSFP 241
+L +R N G+ GL FP
Sbjct: 387 ILLVQRPNSGLLAGLWEFP 405
>GENEDB_PFALCIPARUM|PF11_0306 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine
glycosylase, putative" species:5833 "Plasmodium falciparum"
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR003265 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703
KO:K03575 RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 308 (113.5 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 68/165 (41%), Positives = 100/165 (60%)
Query: 6 NTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSR 65
+TK Y I++SEIMLQQT+V+TV+ +Y +++ K+ NI LA+ L++V+ LW GLGYY+R
Sbjct: 208 STKG-YQIYISEIMLQQTKVHTVLNFYLKWMNKWNNIFDLAKCNLDDVLILWKGLGYYNR 266
Query: 66 ARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNVKRIL 125
A+NL C K+V KYNGIFP + L LPGIG T+ AI + Y +++ +D N+ RI
Sbjct: 267 AKNLLECCKIVVDKYNGIFPNDLKLLKTLPGIGDYTSKAICIHLYNRKDICIDTNIIRIF 326
Query: 126 IRVLGINCSLNIKFIEKKLWRYAIDLLP-KKNIEIYTQGLMDFGS 169
R+ N + K + + L + N +Q MD GS
Sbjct: 327 SRITDTINYYNSGTLLKHCEKVSEILCSGESNYSDLSQAFMDLGS 371
Score = 54 (24.1 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 218 IDDDYVLFQKRSNKGIWGGLLSFPEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKN 277
++D Y++ K ++ ++ FP +IL D +K+ +L +K +
Sbjct: 479 LEDTYMMI-KNTDTNLFSMHYLFP-FILLDTYDKNDCVKVKHFNDL-LKSLNVTNSEKDR 535
Query: 278 YLILPIISHKLTHLQFKIVPCHIFLKKCFLKEN--KNNFI--WYPIKKIKN 324
YL + HK +HL + HI+L EN KNN W +K I+N
Sbjct: 536 YLYINNFKHKFSHLTYHT---HIYLCTVSDWENITKNNEERKWVILKDIRN 583
>UNIPROTKB|Q8II68 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine glycosylase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000703
"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR003265 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703 KO:K03575
RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 308 (113.5 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 68/165 (41%), Positives = 100/165 (60%)
Query: 6 NTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSR 65
+TK Y I++SEIMLQQT+V+TV+ +Y +++ K+ NI LA+ L++V+ LW GLGYY+R
Sbjct: 208 STKG-YQIYISEIMLQQTKVHTVLNFYLKWMNKWNNIFDLAKCNLDDVLILWKGLGYYNR 266
Query: 66 ARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNVKRIL 125
A+NL C K+V KYNGIFP + L LPGIG T+ AI + Y +++ +D N+ RI
Sbjct: 267 AKNLLECCKIVVDKYNGIFPNDLKLLKTLPGIGDYTSKAICIHLYNRKDICIDTNIIRIF 326
Query: 126 IRVLGINCSLNIKFIEKKLWRYAIDLLP-KKNIEIYTQGLMDFGS 169
R+ N + K + + L + N +Q MD GS
Sbjct: 327 SRITDTINYYNSGTLLKHCEKVSEILCSGESNYSDLSQAFMDLGS 371
Score = 54 (24.1 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 218 IDDDYVLFQKRSNKGIWGGLLSFPEWILKDKIINFVDNNLKNLIELEIKKFISSFGFIKN 277
++D Y++ K ++ ++ FP +IL D +K+ +L +K +
Sbjct: 479 LEDTYMMI-KNTDTNLFSMHYLFP-FILLDTYDKNDCVKVKHFNDL-LKSLNVTNSEKDR 535
Query: 278 YLILPIISHKLTHLQFKIVPCHIFLKKCFLKEN--KNNFI--WYPIKKIKN 324
YL + HK +HL + HI+L EN KNN W +K I+N
Sbjct: 536 YLYINNFKHKFSHLTYHT---HIYLCTVSDWENITKNNEERKWVILKDIRN 583
>UNIPROTKB|E2RG99 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] InterPro:IPR000086 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR005760
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS01155
PROSITE:PS51462 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 GO:GO:0004519 GO:GO:0019104
GeneTree:ENSGT00510000047220 OMA:HLGEVVH TIGRFAMs:TIGR01084
EMBL:AAEX03009783 Ensembl:ENSCAFT00000007437 Uniprot:E2RG99
Length = 636
Score = 319 (117.4 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 67/163 (41%), Positives = 95/163 (58%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SE+MLQQTQV TVI YY R+++K+P + LA A LE V +LW+GLGYYSR R
Sbjct: 211 RRAYAVWVSEVMLQQTQVATVIDYYTRWMQKWPTLQDLAGASLEEVNQLWAGLGYYSRGR 270
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P +L L PG+G+ TA AI A+G+ ++DGNV R+L
Sbjct: 271 RLQQGARKVVEELGGHVPHTAETLQRLLPGVGRYTAGAIASIAFGQATGVVDGNVIRVLC 330
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
RV I + + + LW A L+ + Q M+ G+
Sbjct: 331 RVRAIGADSSSTLVSQHLWGLAQQLVDPARPGDFNQAAMELGA 373
Score = 38 (18.4 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 223 VLFQKRSNKGIWGGLLSFP 241
+L +R + G+ GL FP
Sbjct: 474 ILLVQRPSSGLLAGLWEFP 492
>UNIPROTKB|F1S368 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00293 Pfam:PF00730 PROSITE:PS01155 PROSITE:PS51462
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0005634
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 OMA:HLGEVVH EMBL:CU657926
Ensembl:ENSSSCT00000004334 Uniprot:F1S368
Length = 524
Score = 306 (112.8 bits), Expect = 5.5e-29, Sum P(2) = 5.5e-29
Identities = 65/163 (39%), Positives = 94/163 (57%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SE+MLQQTQV TVI YY R+++ +P + LA A LE V +LW+GLGYYSR R
Sbjct: 99 RRAYAVWVSEVMLQQTQVATVINYYTRWMQTWPTLRDLASASLEEVNQLWAGLGYYSRGR 158
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ +L L PG+G+ TA AI A+G+ ++ GNV R+L
Sbjct: 159 WLQTGARKVVEELGGHMPRTAETLQRLLPGVGRYTAGAIASIAFGQAAGVMYGNVFRVLC 218
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
RV I + ++LW A L+ + Q M+ G+
Sbjct: 219 RVRAIGADPRSTLVSQQLWSLAQQLVDPARPGDFNQAAMELGA 261
Score = 41 (19.5 bits), Expect = 5.5e-29, Sum P(2) = 5.5e-29
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 223 VLFQKRSNKGIWGGLLSFP 241
+L +R N G+ GL FP
Sbjct: 362 LLLVQRPNSGLLAGLWEFP 380
>UNIPROTKB|Q5T413 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519 EMBL:AL359540
UniGene:Hs.271353 HGNC:HGNC:7527 HOVERGEN:HBG052540
HOGENOM:HOG000028743 IPI:IPI00975588 SMR:Q5T413 STRING:Q5T413
Ensembl:ENST00000435155 Uniprot:Q5T413
Length = 291
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 66/163 (40%), Positives = 96/163 (58%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SE+MLQQTQV TVI YY +++K+P + LA A LE V +LW+GLGYYSR R
Sbjct: 108 RRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGR 167
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ +L L PG+G+ TA AI A+G+ ++DGNV R+L
Sbjct: 168 RLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLC 227
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
RV I + + ++LW A L+ + Q M+ G+
Sbjct: 228 RVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGA 270
>UNIPROTKB|F1N4K4 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 OMA:HLGEVVH EMBL:DAAA02009006
IPI:IPI00703676 UniGene:Bt.38838 Ensembl:ENSBTAT00000014928
NextBio:20870678 Uniprot:F1N4K4
Length = 526
Score = 299 (110.3 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 64/163 (39%), Positives = 94/163 (57%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y + +++MLQQTQV TVI YY R+++K+P + LA A LE V +LW+GLGYYSR R
Sbjct: 99 RRAYAVCFTDVMLQQTQVATVINYYTRWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGR 158
Query: 68 NLHICAKLVFFKYNGIFPKNFISLIN-LPGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ +L LPG+G+ TA AI A+G+ ++DGNV R+L
Sbjct: 159 WLQEGARKVVEELGGHMPRTAETLQQFLPGVGRYTAGAIASIAFGQAAGVVDGNVIRVLC 218
Query: 127 RVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
RV I + + + LW A L+ + Q M+ G+
Sbjct: 219 RVRAIGADSSSTLVSQHLWSLAQQLVDPARPGDFNQAAMELGA 261
Score = 45 (20.9 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 222 YVLFQKRSNKGIWGGLLSFP 241
++L +R N G+ GL FP
Sbjct: 361 HILLVQRPNSGLLAGLWEFP 380
>DICTYBASE|DDB_G0270764 [details] [associations]
symbol:myh "monofunctional DNA glycosylase"
species:44689 "Dictyostelium discoideum" [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 SMART:SM00525
dictyBase:DDB_G0270764 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0006298
GO:GO:0004519 KO:K03575 eggNOG:COG1194 RefSeq:XP_001134477.1
ProteinModelPortal:Q1ZXP7 STRING:Q1ZXP7 EnsemblProtists:DDB0232996
GeneID:8617615 KEGG:ddi:DDB_G0270764 InParanoid:Q1ZXP7 OMA:RSIGANP
ProtClustDB:CLSZ2847450 Uniprot:Q1ZXP7
Length = 574
Score = 319 (117.4 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 70/176 (39%), Positives = 102/176 (57%)
Query: 2 LPWQNTKNT-------YYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVM 54
LPW+ N+ Y +W+SEIMLQQT+V TVI Y+ ++++K+P I LA +E V
Sbjct: 114 LPWRKHDNSLDENVIAYRVWVSEIMLQQTRVATVIEYFNKWIEKWPTINDLASTTIEEVN 173
Query: 55 ELWSGLGYYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRN 114
++WSGLGYY RA+NL + +K V +N P + SL+ + GIG TA AI A+ K
Sbjct: 174 KVWSGLGYYRRAKNLWLGSKYVVDNFNSKIPSDVKSLLEINGIGPYTAGAISSIAFNKPV 233
Query: 115 AILDGNVKRILIRVLGINCSLNIKFIEKKLWRYAIDLLPK-KNIEIYTQGLMDFGS 169
++DGNV R+L RV I + + K W DL+ +N + Q LM+ G+
Sbjct: 234 PLVDGNVIRVLSRVRSIGANPKLSSTVKLFWELGNDLVESVENPCNFNQSLMELGA 289
>UNIPROTKB|E9PM53 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
InterPro:IPR003265 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00730 PROSITE:PS01155 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0004519 EMBL:AL359540 HGNC:HGNC:7527
IPI:IPI01012578 ProteinModelPortal:E9PM53 SMR:E9PM53
Ensembl:ENST00000528013 ArrayExpress:E9PM53 Bgee:E9PM53
Uniprot:E9PM53
Length = 248
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 60/138 (43%), Positives = 86/138 (62%)
Query: 8 KNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRAR 67
+ Y +W+SE+MLQQTQV TVI YY +++K+P + LA A LE V +LW+GLGYYSR R
Sbjct: 111 RRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGR 170
Query: 68 NLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIRVFAYGKRNAILDGNVKRILI 126
L A+ V + G P+ +L L PG+G+ TA AI A+G+ ++DGNV R+L
Sbjct: 171 RLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLC 230
Query: 127 RVLGINCSLNIKFIEKKL 144
RV I + + ++L
Sbjct: 231 RVRAIGADPSSTLVSQQL 248
>TAIR|locus:2135828 [details] [associations]
symbol:AT4G12740 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA;ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS00893 PROSITE:PS01155 PROSITE:PS51462 SMART:SM00278
SMART:SM00478 EMBL:CP002687 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787
EMBL:AL049640 EMBL:AL161534 IPI:IPI00528123 PIR:T06632
RefSeq:NP_193010.2 UniGene:At.54294 ProteinModelPortal:F4JRF4
SMR:F4JRF4 PRIDE:F4JRF4 EnsemblPlants:AT4G12740.1 GeneID:826886
KEGG:ath:AT4G12740 GeneFarm:2854 TAIR:At4g12740 KO:K03575
OMA:FWKLAAQ Uniprot:F4JRF4
Length = 630
Score = 192 (72.6 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 44/119 (36%), Positives = 65/119 (54%)
Query: 51 ENVMELWSGLGYYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAY 110
+ V E+W+GLGYY RAR L AK+V G FP SL+ + GIGQ TA AI A+
Sbjct: 221 KEVNEMWAGLGYYRRARFLLEGAKMVVAGTEG-FPNQASSLMKVKGIGQYTAGAIASIAF 279
Query: 111 GKRNAILDGNVKRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
+ ++DGNV R+L R+ I+ + + + W+ A L+ + Q LM+ G+
Sbjct: 280 NEAVPVVDGNVIRVLARLKAISANPKDRLTARNFWKLAAQLVDPSRPGDFNQSLMELGA 338
Score = 151 (58.2 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 2 LPWQNTKN-------TYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVM 54
LPW+N ++ Y +W+SEIMLQQT+V TV+ YY+R+++K+P I L QA LEN++
Sbjct: 146 LPWRNRRSESEKERRAYEVWVSEIMLQQTRVQTVMKYYKRWMQKWPTIYDLGQASLENLI 205
Score = 51 (23.0 bits), Expect = 5.3e-26, Sum P(3) = 5.3e-26
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 222 YVLFQKRSNKGIWGGLLSFPEWILKDKIINFVDNNLKNLIELEIKKF 268
+VL KR +G+ GL FP IL ++ + N N+ E +F
Sbjct: 407 FVLV-KRPEQGLLAGLWEFPSVILNEEADSATRRNAINVYLKEAFRF 452
>TIGR_CMR|CJE_1792 [details] [associations]
symbol:CJE_1792 "A/G-specific adenine glycosylase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004519 GO:GO:0019104 KO:K03575
eggNOG:COG1194 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
RefSeq:YP_179763.1 ProteinModelPortal:Q5HSH2 STRING:Q5HSH2
GeneID:3232419 KEGG:cjr:CJE1792 PATRIC:20045396 OMA:WQGAGYY
ProtClustDB:CLSK879335 BioCyc:CJEJ195099:GJC0-1822-MONOMER
Uniprot:Q5HSH2
Length = 339
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 64/160 (40%), Positives = 97/160 (60%)
Query: 11 YYIWLSEIMLQQTQVNTVIP-YYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYSRARNL 69
Y +++SEIMLQQTQV +V+ +Y FL+KFP + SLA A + +++ W GLGYY+RARNL
Sbjct: 46 YGVYISEIMLQQTQVKSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYTRARNL 105
Query: 70 HICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNVKRILIRVL 129
A K+ PK L L GIG TA AI F Y ++ + +DGN++R+L R+
Sbjct: 106 KKAALECVDKFEAKLPKEVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRVLSRLF 165
Query: 130 GINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
+ + ++K +EK+ A +LL + + Q L+D G+
Sbjct: 166 ALE-NPSMKELEKR----AKELLNLNHAFDHNQALLDIGA 200
>TIGR_CMR|GSU_1613 [details] [associations]
symbol:GSU_1613 "A/G-specific adenine glycosylase,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0004844
"uracil DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR003265
InterPro:IPR011257 Pfam:PF00730 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004519 KO:K03575
HSSP:P17802 HOGENOM:HOG000028742 RefSeq:NP_952664.1
ProteinModelPortal:Q74CQ9 GeneID:2687415 KEGG:gsu:GSU1613
PATRIC:22026073 OMA:WHNALMD ProtClustDB:CLSK873803
BioCyc:GSUL243231:GH27-1573-MONOMER Uniprot:Q74CQ9
Length = 285
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 65/168 (38%), Positives = 90/168 (53%)
Query: 2 LPWQNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLG 61
LPW+ T + Y I +SEIMLQQTQV V Y FL +FPN+ +LA A LE V+ W GLG
Sbjct: 39 LPWRETFDPYAILVSEIMLQQTQVERVREKYPTFLAEFPNLRALAAAPLERVLAAWQGLG 98
Query: 62 YYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNV 121
Y RA NL CA+ V G P + L+ LPGIG T+ A+ FA+ ++ N+
Sbjct: 99 YNRRAVNLKRCAEAVVASLGGELPADPNELVRLPGIGTYTSRAVAAFAFNTPLPFIETNI 158
Query: 122 KRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
+ + I + S +I ++ L L + N + LMD+GS
Sbjct: 159 RSVYIHHFFADQS-SIH--DRDLMPLIEQTLDRDNPREWYYALMDYGS 203
>POMBASE|SPAC26A3.02 [details] [associations]
symbol:myh1 "adenine DNA glycosylase Myh1" species:4896
"Schizosaccharomyces pombe" [GO:0000077 "DNA damage checkpoint"
evidence=IGI] [GO:0000701 "purine-specific mismatch base pair DNA
N-glycosylase activity" evidence=IMP] [GO:0000702 "oxidized base
lesion DNA N-glycosylase activity" evidence=TAS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC;IDA] [GO:0006281 "DNA repair"
evidence=IC] [GO:0006284 "base-excision repair" evidence=IC]
[GO:0019104 "DNA N-glycosylase activity" evidence=IDA] [GO:0034644
"cellular response to UV" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISM] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS00893 PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478
SMART:SM00525 PomBase:SPAC26A3.02 GO:GO:0005634 GO:GO:0000077
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0034644 GO:GO:0004519 KO:K03575 eggNOG:COG1194
EMBL:AF053340 PIR:T38390 PIR:T43679 RefSeq:NP_594145.1
ProteinModelPortal:Q10159 IntAct:Q10159 MINT:MINT-1209697
STRING:Q10159 EnsemblFungi:SPAC26A3.02.1 GeneID:2542727
KEGG:spo:SPAC26A3.02 OMA:MVRAFKE OrthoDB:EOG4HDX3M NextBio:20803772
GO:GO:0000702 GO:GO:0000701 Uniprot:Q10159
Length = 461
Score = 245 (91.3 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 59/170 (34%), Positives = 92/170 (54%)
Query: 4 W-QNTKNTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLEN-VMELWSGLG 61
W Q + Y + +SEIMLQQT+V TV YY ++++ P + S A+A+ VM LWSG+G
Sbjct: 55 WEQPVQRLYEVLVSEIMLQQTRVETVKRYYTKWMETLPTLKSCAEAEYNTQVMPLWSGMG 114
Query: 62 YYSRARNLH-ICAKLVFFKYNGIFPKNFISLIN-LPGIGQSTASAIRVFAYGKRNAILDG 119
+Y+R + LH C L + I P+ +PG+G TA A+ A+ + I+DG
Sbjct: 115 FYTRCKRLHQACQHLAKLHPSEI-PRTGDEWAKGIPGVGPYTAGAVLSIAWKQPTGIVDG 173
Query: 120 NVKRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMDFGS 169
NV R+L R L I+ + +W+ A +L+ + Q LM+ G+
Sbjct: 174 NVIRVLSRALAIHSDCSKGKANALIWKLANELVDPVRPGDFNQALMELGA 223
Score = 47 (21.6 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 24/96 (25%), Positives = 38/96 (39%)
Query: 220 DDYVLFQKRSNKGIWGGLLSFP-------EWILKDKIINFVDNNLKNLIELEIKKFISSF 272
+ + L +KR + G+ GL FP W KD F ++ I + + I +
Sbjct: 315 EKFFLIRKRPSAGLLAGLWDFPTIEFGQESWP-KDMDAEF-QKSIAQWISNDSRSLIKKY 372
Query: 273 GFIKNYLILPIISH--KLTHLQFKIVPCHIFLKKCF 306
YL I SH K +H+ + I I + F
Sbjct: 373 QSRGRYL--HIFSHIRKTSHVFYAIASPDIVTNEDF 406
Score = 44 (20.5 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 296 VPCHIFLKKCFLKENKNNFIW--YPIKKIKNSPIPAPVRKILFQ 337
VPC+I + KE+ N++ YP+ K ++FQ
Sbjct: 264 VPCNICITDIPSKEDLQNWVVARYPVHPAKTKQREERALVVIFQ 307
>UNIPROTKB|O53574 [details] [associations]
symbol:mutY "PROBABLE ADENINE GLYCOSYLASE MUTY"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
SMART:SM00478 SMART:SM00525 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:BX842583 GO:GO:0051539
GO:GO:0004519 GO:GO:0016798 KO:K03575 EMBL:AL123456 PIR:F70804
RefSeq:NP_218106.1 RefSeq:NP_338239.1 RefSeq:YP_006517079.1
HSSP:P17802 SMR:O53574 EnsemblBacteria:EBMYCT00000003804
EnsemblBacteria:EBMYCT00000070555 GeneID:13317198 GeneID:886639
GeneID:926528 KEGG:mtc:MT3695 KEGG:mtu:Rv3589 KEGG:mtv:RVBD_3589
PATRIC:18129879 TubercuList:Rv3589 HOGENOM:HOG000028742 OMA:IMLQQTP
ProtClustDB:CLSK792583 Uniprot:O53574
Length = 304
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 51/170 (30%), Positives = 90/170 (52%)
Query: 2 LPWQNTK-NTYYIWLSEIMLQQTQVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGL 60
LPW+ + + I +SE MLQQT V+ + +++++P + A A +V+ W L
Sbjct: 32 LPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATASTADVLRAWGKL 91
Query: 61 GYYSRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGN 120
GY RA+ LH CA ++ +N + P + L+ LPG+G TA A+ FAY +R ++D N
Sbjct: 92 GYPRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACFAYRQRVPVVDTN 151
Query: 121 VKRILIRVLGINCSLNIKFIEKKLWRYAIDLLP-KKNIEIYTQGLMDFGS 169
V+R++ R + + + + LLP ++ ++ LM+ G+
Sbjct: 152 VRRVVARAVHGRADAGAPSVPRD-HADVLALLPHRETAPEFSVALMELGA 200
>UNIPROTKB|Q5T418 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519
EMBL:AL359540 UniGene:Hs.271353 HGNC:HGNC:7527 HOGENOM:HOG000028743
IPI:IPI00647822 SMR:Q5T418 MINT:MINT-1380954 STRING:Q5T418
Ensembl:ENST00000412971 Uniprot:Q5T418
Length = 215
Score = 197 (74.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 48 AKLENVMELWSGLGYYSRARNLHICAKLVFFKYNGIFPKNFISLINL-PGIGQSTASAIR 106
++L V +LW+GLGYYSR R L A+ V + G P+ +L L PG+G+ TA AI
Sbjct: 9 SRLWEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIA 68
Query: 107 VFAYGKRNAILDGNVKRILIRVLGINCSLNIKFIEKKLWRYAIDLLPKKNIEIYTQGLMD 166
A+G+ ++DGNV R+L RV I + + ++LW A L+ + Q M+
Sbjct: 69 SIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAME 128
Query: 167 FGS 169
G+
Sbjct: 129 LGA 131
>TIGR_CMR|DET_0935 [details] [associations]
symbol:DET_0935 "endonuclease III" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PIRSF:PIRSF001435 PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 RefSeq:YP_181660.1
ProteinModelPortal:Q3Z7Y9 STRING:Q3Z7Y9 GeneID:3229754
KEGG:det:DET0935 PATRIC:21608917 ProtClustDB:CLSK837188
BioCyc:DETH243164:GJNF-936-MONOMER Uniprot:Q3Z7Y9
Length = 218
Score = 143 (55.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 40/146 (27%), Positives = 77/146 (52%)
Query: 25 VNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYY-SRARNLHICAKLVFFKYNGI 83
+N + P KK+P + + A A L + + G++ ++A N+ A+ V ++ G
Sbjct: 51 INKITP---ALFKKYPGVQAFADASLAELEQDIKSSGFFHNKALNIIGAARAVVSRFGGD 107
Query: 84 FPKNFISLINLPGIGQSTASAIRVFAYGKRNAI-LDGNVKRILIRVLGINCSLNIKFIEK 142
P+N ++ LPG+G+ TA+ + A+G I +D +VKR+ R LG++ + + IE+
Sbjct: 108 VPRNMADMLTLPGVGRKTANVVLHNAFGLVEGIAVDTHVKRLAGR-LGLSTNTDPVKIEQ 166
Query: 143 KLWRYAIDLLPKKNIEIYTQGLMDFG 168
L + L+P+ ++ L+D G
Sbjct: 167 DL----MALIPRSEWGNFSYYLIDHG 188
>TIGR_CMR|CHY_1121 [details] [associations]
symbol:CHY_1121 "endonuclease III" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_359967.1
ProteinModelPortal:Q3AD17 STRING:Q3AD17 GeneID:3726382
KEGG:chy:CHY_1121 PATRIC:21275382
BioCyc:CHYD246194:GJCN-1120-MONOMER Uniprot:Q3AD17
Length = 210
Score = 127 (49.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 37/131 (28%), Positives = 71/131 (54%)
Query: 6 NTKNTYYIWLSEIMLQQT---QVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGY 62
N +N + + ++ ++ Q+ QVN V F+K+ +++ + + +L + LG
Sbjct: 25 NFQNIFQLLVAVVLSAQSTDRQVNKVTEKLFLFVKEPRDLLDMGEEELSRQIR---SLGL 81
Query: 63 Y-SRARNLHICAKLVFFKYNGIFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNV 121
Y ++ARNL A+++ +Y+G P +F L+ LPG+G TA I + K + +D +V
Sbjct: 82 YRNKARNLIKIAEILDREYHGQVPDSFAELLKLPGVGPKTAEVIVGVGFNKPSFPVDTHV 141
Query: 122 KRILIRVLGIN 132
R+ R LG++
Sbjct: 142 FRVARR-LGLS 151
>TIGR_CMR|CJE_0698 [details] [associations]
symbol:CJE_0698 "endonuclease III" species:195099
"Campylobacter jejuni RM1221" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS00764 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 PIR:B81407 RefSeq:YP_178710.1
ProteinModelPortal:Q5HVH5 STRING:Q5HVH5 GeneID:3231980
KEGG:cjr:CJE0698 PATRIC:20043124 ProtClustDB:CLSK872385
BioCyc:CJEJ195099:GJC0-715-MONOMER Uniprot:Q5HVH5
Length = 208
Score = 112 (44.5 bits), Expect = 0.00026, P = 0.00026
Identities = 41/146 (28%), Positives = 71/146 (48%)
Query: 24 QVNTVIPYYQRFLKKFPNIMSLAQAKLENVMELWSGLGYYS-RARNLHICAKLVFFKYNG 82
+VN + P K +P+I SLA A L ++ +++ +A+NL AK V ++G
Sbjct: 44 RVNLITP---DLFKAYPDIKSLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDG 100
Query: 83 IFPKNFISLINLPGIGQSTASAIRVFAYGKRNAILDGNVKRILIRVLGINCSLNIKFIEK 142
P + +L +L G+GQ TA + + G +D +V R+ R LG++ + + E+
Sbjct: 101 EIPLDEQNLKSLAGVGQKTAHVVLIEWCGANFMAVDTHVFRVSHR-LGLSKAKTPEATEE 159
Query: 143 KLWRYAIDLLPKKNIEIYTQGLMDFG 168
L R K N+ Q ++ FG
Sbjct: 160 DLTRTF-----KDNLNYLHQAMVLFG 180
>TIGR_CMR|BA_1570 [details] [associations]
symbol:BA_1570 "endonuclease III" species:198094 "Bacillus
anthracis str. Ames" [GO:0000703 "oxidized pyrimidine nucleobase
lesion DNA N-glycosylase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
Pfam:PF10576 PIRSF:PIRSF001435 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0051539 GO:GO:0005622 GO:GO:0004519 GO:GO:0003906 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 HSSP:P20625
RefSeq:NP_844020.1 RefSeq:YP_018193.1 RefSeq:YP_027725.1
ProteinModelPortal:Q81SS5 SMR:Q81SS5 DNASU:1083694
EnsemblBacteria:EBBACT00000010838 EnsemblBacteria:EBBACT00000014468
EnsemblBacteria:EBBACT00000019730 GeneID:1083694 GeneID:2815568
GeneID:2851771 KEGG:ban:BA_1570 KEGG:bar:GBAA_1570 KEGG:bat:BAS1456
ProtClustDB:CLSK2521133 BioCyc:BANT260799:GJAJ-1530-MONOMER
BioCyc:BANT261594:GJ7F-1594-MONOMER Uniprot:Q81SS5
Length = 215
Score = 112 (44.5 bits), Expect = 0.00029, P = 0.00029
Identities = 28/115 (24%), Positives = 56/115 (48%)
Query: 33 QRFLKKFPNIMSLAQAKLENVMELWSGLGYY-SRARNLHICAKLVFFKYNGIFPKNFISL 91
+ +K+ LE + + +G Y ++A+N+ +++ YNG PK+ L
Sbjct: 53 KNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGEVPKDRDEL 112
Query: 92 INLPGIGQSTASAIRVFAYGKRNAILDGNVKRILIRVLGINCSLNIKFIEKKLWR 146
LPG+G+ TA+ + A+G +D +V+R+ R+ ++ +EK L +
Sbjct: 113 TKLPGVGRKTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMK 167
>TIGR_CMR|NSE_0246 [details] [associations]
symbol:NSE_0246 "endonuclease III" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003906 "DNA-(apurinic
or apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 RefSeq:YP_506140.1 ProteinModelPortal:Q2GEF6
STRING:Q2GEF6 GeneID:3931594 KEGG:nse:NSE_0246 PATRIC:22680583
ProtClustDB:CLSK2528191 BioCyc:NSEN222891:GHFU-276-MONOMER
Uniprot:Q2GEF6
Length = 216
Score = 110 (43.8 bits), Expect = 0.00050, P = 0.00050
Identities = 35/103 (33%), Positives = 61/103 (59%)
Query: 43 MSLAQAKLENVMELWSGLGYYSRARNLHICAK-LVFFKYNGIFPKNFISLINLPGIGQST 101
M LA+ K E++ + GL + ++A+N+ AK L+ K I P NF L +LPGIG+ +
Sbjct: 73 MDLAKLK-ESIKTI--GL-HNNKAKNIIALAKKLISDKQTDI-PNNFQYLQSLPGIGRKS 127
Query: 102 ASAIRVFAYGKRNAILDGNVKRILIRVLGINCSLNIKFIEKKL 144
A+ I +G++ +D +V R+ R+ G+ + N+ +EK+L
Sbjct: 128 ANVILCTLFGEKRIAVDTHVFRVSNRI-GLVHARNVLEVEKQL 169
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.144 0.451 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 341 305 0.00098 115 3 11 22 0.44 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 611 (65 KB)
Total size of DFA: 225 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.42u 0.10s 23.52t Elapsed: 00:00:04
Total cpu time: 23.43u 0.10s 23.53t Elapsed: 00:00:04
Start: Thu Aug 15 12:40:42 2013 End: Thu Aug 15 12:40:46 2013