BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8569
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27715|UNC13_CAEEL Phorbol ester/diacylglycerol-binding protein unc-13
OS=Caenorhabditis elegans GN=unc-13 PE=1 SV=4
Length = 2155
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 28 ETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVGS 69
ETN + G+++E+W KG++WD+ IG HY+PL ++ +SN GS
Sbjct: 69 ETNRPDDGMVLELWAKGVLWDKLIGVHYMPLSEIRYSNAAGS 110
>sp|Q9UPW8|UN13A_HUMAN Protein unc-13 homolog A OS=Homo sapiens GN=UNC13A PE=2 SV=4
Length = 1703
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 28 ETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVG 68
E N ++ GL +EVW+KG+IWD +G ++PL + SNE G
Sbjct: 52 EINRLDLGLTVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEG 92
>sp|Q62768|UN13A_RAT Protein unc-13 homolog A OS=Rattus norvegicus GN=Unc13a PE=1 SV=1
Length = 1735
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 28 ETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVG 68
E N ++ GL +EVW+KG+IWD +G ++PL + SNE G
Sbjct: 52 EINRLDLGLTVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEG 92
>sp|Q4KUS2|UN13A_MOUSE Protein unc-13 homolog A OS=Mus musculus GN=Unc13a PE=1 SV=3
Length = 1712
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 28 ETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVG 68
E N ++ GL +EVW+KG+IWD +G ++PL + SNE G
Sbjct: 52 EINRLDLGLTVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEG 92
>sp|Q9Z1N9|UN13B_MOUSE Protein unc-13 homolog B OS=Mus musculus GN=Unc13b PE=2 SV=2
Length = 1602
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 18 SVKTRFEVPS-------ETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVG 68
+V R + PS E + ++ GL +EVW+KG+IWD +G ++ L + S+E G
Sbjct: 35 TVAVRGDQPSWEQDFMFEISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEG 92
>sp|O14795|UN13B_HUMAN Protein unc-13 homolog B OS=Homo sapiens GN=UNC13B PE=1 SV=2
Length = 1591
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 18 SVKTRFEVPS-------ETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVG 68
+V R + PS E + ++ GL +EVW+KG+IWD +G ++ L + S+E G
Sbjct: 35 TVAVRGDQPSWEQDFMFEISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEG 92
>sp|Q62769|UN13B_RAT Protein unc-13 homolog B OS=Rattus norvegicus GN=Unc13b PE=1 SV=2
Length = 1622
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 18 SVKTRFEVPS-------ETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVG 68
+V R + PS E + ++ GL +EVW+KG+IWD +G ++ L + S+E G
Sbjct: 35 TVAVRGDQPSWEQDFMFEISRLDLGLSVEVWNKGLIWDTMVGTVWIALKTIRQSDEEG 92
>sp|Q25378|KPC1_LYTPI Protein kinase C OS=Lytechinus pictus GN=PKC1 PE=2 SV=1
Length = 658
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Query: 23 FEVPSETNDVNQGLLIEVWDKGIIWDRA 50
F+ E D N+ LL+EVWD WDRA
Sbjct: 218 FDFNLEDTDRNRRLLVEVWD----WDRA 241
>sp|Q17YZ0|SYL_HELAH Leucine--tRNA ligase OS=Helicobacter acinonychis (strain Sheeba)
GN=leuS PE=3 SV=1
Length = 806
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 1 MRKESNVIGSNFRWSVFSVKTRFEVPSETN--DVNQGLLIEVWDKGIIWDRAIGYHYLPL 58
M+KE +G +F K R S+ N + Q I++W+KG+I+ + ++ P
Sbjct: 104 MQKEFEALGFSFS------KNREFATSDPNYTEFEQQFFIDLWEKGLIYRKKAMLNWCPN 157
Query: 59 PQVAFSNE 66
+ +NE
Sbjct: 158 DKTVLANE 165
>sp|P34268|FLII_CAEEL Protein flightless-1 homolog OS=Caenorhabditis elegans GN=fli-1
PE=2 SV=2
Length = 1257
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 31 DVNQGLLIEVWDKGIIWDRA------IGYHYLPLPQVAFSNEVGSRKTAGVKGLF 79
D QG ++E +G + +R IG +L LPQV + + G KG+F
Sbjct: 722 DKPQGAIVEHVPEGFVAERKKLYKVNIGMGFLELPQVELPKGIAKQDMLGSKGVF 776
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,551,029
Number of Sequences: 539616
Number of extensions: 1225468
Number of successful extensions: 2001
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1994
Number of HSP's gapped (non-prelim): 10
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)