Query psy8569
Match_columns 85
No_of_seqs 47 out of 49
Neff 2.9
Searched_HMMs 29240
Date Fri Aug 16 22:08:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8569.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8569hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cjt_A UNC-13 homolog A, MUNC1 99.4 4.3E-13 1.5E-17 88.3 7.1 62 8-76 42-103 (131)
2 2cjs_A UNC-13 homolog A, MUNC1 99.4 1E-12 3.5E-17 90.7 7.3 61 8-75 51-111 (167)
3 1rlw_A Phospholipase A2, CALB 99.1 8.7E-11 3E-15 73.7 5.0 66 3-77 44-111 (126)
4 2bwq_A Regulating synaptic mem 99.1 2E-10 6.7E-15 72.4 5.0 59 8-76 64-129 (129)
5 2dmh_A Myoferlin; beta-sandwic 99.0 4.2E-10 1.4E-14 71.9 6.0 63 3-74 41-109 (140)
6 1wfj_A Putative elicitor-respo 99.0 1.2E-10 4.2E-15 74.1 3.0 66 3-76 45-113 (136)
7 3b7y_A E3 ubiquitin-protein li 99.0 8E-10 2.7E-14 71.8 6.7 64 7-77 66-134 (153)
8 3kwu_A MUNC13-1; calcium bindi 99.0 4.8E-10 1.6E-14 72.5 5.5 64 3-77 52-128 (148)
9 1gmi_A Protein kinase C, epsil 99.0 1.6E-10 5.4E-15 74.5 2.7 63 7-77 58-121 (136)
10 3m7f_B E3 ubiquitin-protein li 99.0 1.3E-09 4.4E-14 73.1 6.6 63 8-77 55-122 (176)
11 2ep6_A MCTP2 protein; beta san 99.0 3.8E-10 1.3E-14 72.0 3.7 59 8-77 54-113 (133)
12 3pyc_A E3 ubiquitin-protein li 98.9 3.9E-10 1.3E-14 71.9 3.2 62 8-78 48-113 (132)
13 2q3x_A Regulating synaptic mem 98.9 7.3E-10 2.5E-14 74.6 4.6 69 3-80 71-142 (171)
14 1v27_A Regulating synaptic mem 98.9 8.2E-10 2.8E-14 70.2 4.6 62 7-78 66-134 (141)
15 1rh8_A Piccolo protein; beta-s 98.9 7.8E-10 2.7E-14 70.8 4.1 61 8-77 73-138 (142)
16 3f04_A Synaptotagmin-1; C2A, c 98.9 6.5E-10 2.2E-14 71.5 3.7 65 3-76 72-141 (143)
17 2b3r_A Phosphatidylinositol-4- 98.9 1.3E-09 4.4E-14 70.7 5.1 66 3-77 59-130 (134)
18 1rsy_A Synaptotagmin I; calciu 98.9 1.6E-09 5.6E-14 70.9 5.1 66 3-77 80-150 (152)
19 1wfm_A Synaptotagmin XIII; C2 98.9 2.5E-09 8.6E-14 69.4 5.6 66 3-77 62-132 (138)
20 2d8k_A Synaptotagmin VII; exoc 98.9 1.9E-09 6.6E-14 69.3 4.9 62 8-78 70-136 (141)
21 3fdw_A Synaptotagmin-like prot 98.9 8.8E-10 3E-14 71.7 3.2 66 3-77 64-134 (148)
22 1a25_A CALB, protein kinase C 98.9 1.1E-09 3.7E-14 71.3 3.3 60 8-77 77-139 (149)
23 2dmg_A KIAA1228 protein; beta- 98.8 2.2E-09 7.4E-14 69.0 3.9 70 3-81 63-139 (142)
24 3fbk_A RGS3, RGP3, regulator o 98.8 2E-09 6.7E-14 70.8 3.7 67 3-77 66-137 (153)
25 2fk9_A Protein kinase C, ETA t 98.8 1.3E-09 4.4E-14 75.3 2.3 62 8-77 81-145 (157)
26 3rdl_A Protein kinase C alpha 98.8 2.3E-09 7.9E-14 67.8 3.1 65 3-77 56-124 (137)
27 2enp_A B/K protein; C2 type 1, 98.8 2.7E-09 9.3E-14 69.1 2.8 67 3-78 71-142 (147)
28 1ugk_A Synaptotagmin IV, KIAA1 98.8 7.9E-09 2.7E-13 66.2 4.9 63 8-78 67-134 (138)
29 2chd_A Rabphilin-3A, exophilin 98.8 4.6E-09 1.6E-13 67.4 3.3 60 8-76 75-139 (142)
30 2nq3_A Itchy homolog E3 ubiqui 98.7 7.7E-09 2.6E-13 71.0 3.6 63 8-78 77-143 (173)
31 1tjx_A Similar to synaptotagmi 98.7 1.1E-08 3.9E-13 67.1 4.2 63 8-77 71-147 (159)
32 1w15_A Synaptotagmin IV; metal 98.7 1.6E-08 5.6E-13 65.7 4.9 51 3-60 70-125 (153)
33 3n5a_A Synaptotagmin-7; calciu 98.7 1.1E-08 3.7E-13 64.6 3.4 53 3-62 56-113 (138)
34 2r83_A Synaptotagmin-1; C2A-C2 98.7 3.7E-08 1.3E-12 69.1 5.9 66 3-77 57-127 (284)
35 2z0u_A WW domain-containing pr 98.6 4.7E-08 1.6E-12 65.9 4.5 66 3-76 84-154 (155)
36 2cm5_A Rabphilin-3A; protein t 98.5 8.5E-08 2.9E-12 63.4 4.9 47 8-61 83-133 (166)
37 1cjy_A CPLA2, protein (cytosol 98.4 3.1E-07 1.1E-11 77.4 5.4 61 8-77 65-126 (749)
38 2r83_A Synaptotagmin-1; C2A-C2 98.3 4.6E-07 1.6E-11 63.6 4.8 68 3-77 190-272 (284)
39 3jzy_A Intersectin 2; C2 domai 98.3 2.7E-07 9.2E-12 69.7 3.4 65 7-78 427-495 (510)
40 3bxj_A RAS GTPase-activating p 98.2 2.1E-07 7E-12 72.9 0.5 66 3-77 42-116 (483)
41 3nsj_A Perforin-1; pore formin 98.2 1.2E-06 4.2E-11 70.8 4.7 48 6-60 432-482 (540)
42 1djx_A PLC-D1, phosphoinositid 98.1 3.4E-06 1.2E-10 68.7 4.8 63 3-77 539-605 (624)
43 1dqv_A Synaptotagmin III; beta 98.0 2.1E-06 7.2E-11 61.6 1.6 68 3-77 192-275 (296)
44 3ohm_B 1-phosphatidylinositol- 97.9 6.8E-06 2.3E-10 70.5 4.4 51 3-63 762-817 (885)
45 1dqv_A Synaptotagmin III; beta 97.9 1.3E-05 4.4E-10 57.5 5.1 66 3-76 58-129 (296)
46 3qr0_A Phospholipase C-beta (P 97.8 1.7E-05 5.8E-10 67.4 4.6 51 3-63 688-743 (816)
47 2zkm_X 1-phosphatidylinositol- 97.6 3.1E-05 1.1E-09 65.1 3.7 50 3-63 715-771 (799)
48 3pfq_A PKC-B, PKC-beta, protei 97.5 3.4E-05 1.2E-09 61.7 2.7 63 3-75 212-278 (674)
49 3l9b_A Otoferlin; C2-domain, b 96.7 0.0018 6.1E-08 45.8 4.1 57 3-64 51-111 (144)
50 2enj_A NPKC-theta, protein kin 89.7 0.16 5.6E-06 35.8 2.2 57 9-76 58-117 (138)
51 1yrk_A NPKC-delta, protein kin 89.5 0.13 4.5E-06 35.7 1.5 56 10-76 54-112 (126)
52 3l4c_A Dedicator of cytokinesi 79.8 3.2 0.00011 30.8 5.1 45 9-60 87-139 (220)
53 1xu1_R Tumor necrosis factor r 41.7 8.9 0.0003 22.4 0.9 11 44-54 9-19 (42)
54 3uaf_A TTR-52; beta barrel/san 36.3 11 0.00038 25.0 0.9 22 34-55 21-45 (117)
55 2yrb_A Protein fantom; beta sa 27.5 50 0.0017 23.1 3.0 57 4-66 58-121 (156)
No 1
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.42 E-value=4.3e-13 Score=88.34 Aligned_cols=62 Identities=35% Similarity=0.686 Sum_probs=54.1
Q ss_pred ecCceeeeeccccceeeEeeeccCCCCceEEEEeeCCeeeeceeeEEEeecCCeeeecCcCCCceeEee
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVGSRKTAGVK 76 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgviwDdLLG~~~lPL~~v~~s~e~g~g~W~~l~ 76 (85)
++.||.||+ +|.|+..+.+..|.|+|||+|+..||+||.+.|||++|..+...+..+|..+.
T Consensus 42 ~t~nP~WnE-------~f~f~v~~~~~~L~~~V~D~d~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~ 103 (131)
T 2cjt_A 42 RGSQPSWEQ-------DFMFEINRLDLGLTVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLD 103 (131)
T ss_dssp ESSSCEEEE-------EEEEEECCCSSEEEEEEEECCSSCEEEEEEEEEEGGGSCBCSSCCCCEEEECB
T ss_pred CCCCceECC-------EEEEEEeCCCCeEEEEEEECCCCCCCeEEEEEEEHHHhhhcCCCCccccEEcc
Confidence 589999999 99999988878899999999988999999999999999887666666776543
No 2
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.38 E-value=1e-12 Score=90.66 Aligned_cols=61 Identities=36% Similarity=0.695 Sum_probs=54.5
Q ss_pred ecCceeeeeccccceeeEeeeccCCCCceEEEEeeCCeeeeceeeEEEeecCCeeeecCcCCCceeEe
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVGSRKTAGV 75 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgviwDdLLG~~~lPL~~v~~s~e~g~g~W~~l 75 (85)
++.||.||+ +|.|...+....|.|+|||+|+..||+||.+.|||++|..+.+.+..+|..+
T Consensus 51 ~t~nP~WnE-------~f~f~v~~~~~~L~~~V~D~d~~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~ 111 (167)
T 2cjs_A 51 RGSQPSWEQ-------DFMFEINRLDLGLTVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEGPGEWLTL 111 (167)
T ss_dssp ESSSCEEEE-------EEEEECCCTTSEEEEEEEECCSSCCEEEEEEEEEGGGSCBCSSCCCCEEEEE
T ss_pred CCCCCCCCC-------EEEEEeeCCCCEEEEEEEECCCCCCceEEEEEEEHHHhcccCcCCcccceee
Confidence 589999999 9999999888899999999998899999999999999988776677677654
No 3
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.11 E-value=8.7e-11 Score=73.73 Aligned_cols=66 Identities=11% Similarity=0.107 Sum_probs=52.8
Q ss_pred eeeeee-cCceeeeeccccceeeEeeecc-CCCCceEEEEeeCCeeeeceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETN-DVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~-d~~~gL~vEVWnKgviwDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
||-.++ +.||.||+ +|.|... ....-|.|+|||++..-|++||.+.+||+.+.. +.....|..|++
T Consensus 44 kT~v~~~t~nP~wne-------~f~f~v~~~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~--~~~~~~~~~L~~ 111 (126)
T 1rlw_A 44 RTRHFNNDINPVWNE-------TFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKV--GEKKEVPFIFNQ 111 (126)
T ss_dssp ECCCCTTCSSCEEEE-------EEEEEECTTSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCT--TCEEEEEEEETT
T ss_pred EccccCCCCCCcccc-------eEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHccC--CCcEEEEEEcCC
Confidence 344444 56899999 8888873 445689999999999889999999999999974 566678888864
No 4
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.06 E-value=2e-10 Score=72.38 Aligned_cols=59 Identities=12% Similarity=0.200 Sum_probs=44.8
Q ss_pred ecCceeeeeccccceeeEeeecc---C-CCCceEEEEeeCCeee---eceeeEEEeecCCeeeecCcCCCceeEee
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETN---D-VNQGLLIEVWDKGIIW---DRAIGYHYLPLPQVAFSNEVGSRKTAGVK 76 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~---d-~~~gL~vEVWnKgviw---DdLLG~~~lPL~~v~~s~e~g~g~W~~l~ 76 (85)
++.||.||+ +|.|... + .+..|.|+|||++.+- |++||.+.+||.++..+ +..+|+.|+
T Consensus 64 ~t~nP~wne-------~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~---~~~~W~~Lq 129 (129)
T 2bwq_A 64 KTLEPKWNQ-------TFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLD---DEPHWYKLQ 129 (129)
T ss_dssp SBSSCEEEE-------EEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCS---SCEEEEECC
T ss_pred CCCCCcccc-------EEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCC---cCCccEECc
Confidence 456899999 8888853 2 2458999999999987 99999999999998763 277898874
No 5
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=4.2e-10 Score=71.93 Aligned_cols=63 Identities=19% Similarity=0.139 Sum_probs=50.0
Q ss_pred eeeeeecC-ceeeeeccccceeeEeeeccC----CCCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeE
Q psy8569 3 KESNVIGS-NFRWSVFSVKTRFEVPSETND----VNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAG 74 (85)
Q Consensus 3 ~~~~v~g~-~P~W~~~~~~~~~~f~fet~d----~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~ 74 (85)
||-+++++ ||.||+ +|.|...+ ...-|.|+|||++.+ -|++||.+.|||..+.. +.....|..
T Consensus 41 kT~v~~~t~nP~wne-------~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~--~~~~~~w~~ 109 (140)
T 2dmh_A 41 KTKKVDNELNPVWNE-------ILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLTG--DQSRSLPYK 109 (140)
T ss_dssp ECCCCCSCSSCEEEE-------EEEEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCS--SSCEEEEEE
T ss_pred EeeeecCCCCCccCc-------EEEEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhcc--CCCceeEEe
Confidence 45556665 899999 88887743 356899999999988 57899999999999865 445567877
No 6
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.02 E-value=1.2e-10 Score=74.11 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=53.3
Q ss_pred eeeeee--cCceeeeeccccceeeEeeeccCCCCceEEEEeeCCeee-eceeeEEEeecCCeeeecCcCCCceeEee
Q psy8569 3 KESNVI--GSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGIIW-DRAIGYHYLPLPQVAFSNEVGSRKTAGVK 76 (85)
Q Consensus 3 ~~~~v~--g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgviw-DdLLG~~~lPL~~v~~s~e~g~g~W~~l~ 76 (85)
||-.++ +.||.|++ +|.|...+...-|.|+|||++.+- |++||.+.|||..+... .....+|+.|.
T Consensus 45 kT~~~~~~~~nP~Wne-------~f~f~v~~~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~-~~~~~~w~~L~ 113 (136)
T 1wfj_A 45 KSNVAEGMGTTPEWNE-------TFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVE-GSIPPTAYNVV 113 (136)
T ss_dssp ECCCCTTCCSSCEEEE-------EEEEEEESSCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHH-SEEEEEEEEEE
T ss_pred eeEeccCCCCCCccCc-------EEEEEECCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccC-CCCCcEEEEee
Confidence 444554 78999999 888888887778999999999874 89999999999999432 34456888875
No 7
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.01 E-value=8e-10 Score=71.76 Aligned_cols=64 Identities=22% Similarity=0.242 Sum_probs=52.1
Q ss_pred eecCceeeeeccccceeeEeeeccCCCCceEEEEeeCCee-eeceeeEEEeecCCeeeecCc----CCCceeEeec
Q psy8569 7 VIGSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEV----GSRKTAGVKG 77 (85)
Q Consensus 7 v~g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~----g~g~W~~l~~ 77 (85)
-++.||.||+ +|.|...+.+.-|.|+|||++.+ -|++||.+.|||..+...... -..+|+.|+.
T Consensus 66 ~~t~nP~wne-------~f~f~v~~~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~ 134 (153)
T 3b7y_A 66 KKSLNPKWNE-------EILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHP 134 (153)
T ss_dssp SSCSSCCCCE-------EEEEEECTTTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBC
T ss_pred cCCCCCCCCC-------EEEEEecCCCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccc
Confidence 3456899999 88888877777899999999987 589999999999999875432 1248998864
No 8
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.01 E-value=4.8e-10 Score=72.47 Aligned_cols=64 Identities=11% Similarity=0.123 Sum_probs=52.4
Q ss_pred eeeeee-cCceeeeeccccceeeEeeeccCCCCceEEEEeeCCee------------eeceeeEEEeecCCeeeecCcCC
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGII------------WDRAIGYHYLPLPQVAFSNEVGS 69 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgvi------------wDdLLG~~~lPL~~v~~s~e~g~ 69 (85)
||-.++ +.||.|++ +|.|+..+..+-|.|+|||++.. -|++||.+.+||+.+. .+.
T Consensus 52 kT~~~~~t~nP~Wne-------~f~f~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~----~~~ 120 (148)
T 3kwu_A 52 RTKTIYGNLNPVWEE-------NFHFECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS----GEM 120 (148)
T ss_dssp ECCCCCSCSSCEEEE-------EEEEEECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC----SEE
T ss_pred ECCccCCCCCCCccc-------EEEEEecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc----CCC
Confidence 344444 56899999 88998877778899999999985 7999999999999993 345
Q ss_pred CceeEeec
Q psy8569 70 RKTAGVKG 77 (85)
Q Consensus 70 g~W~~l~~ 77 (85)
.+|..|+.
T Consensus 121 ~~w~~L~~ 128 (148)
T 3kwu_A 121 DVWYNLDK 128 (148)
T ss_dssp EEEEECBC
T ss_pred CEEEEccc
Confidence 68999873
No 9
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=98.99 E-value=1.6e-10 Score=74.53 Aligned_cols=63 Identities=8% Similarity=0.078 Sum_probs=49.4
Q ss_pred eecCceeeeeccccceeeEeeeccCCCCceEEEEeeCCeee-eceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 7 VIGSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGIIW-DRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 7 v~g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgviw-DdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
-++.||.||+ +|.|+..+- +-|.|+|||++.+- ||+||.|.|||+++..........|..|+.
T Consensus 58 ~~t~nP~WnE-------~f~f~v~~~-~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 121 (136)
T 1gmi_A 58 QKTNSPAWHD-------EFVTDVCNG-RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP 121 (136)
T ss_dssp SSCSSCEEEE-------EEEEEEEEE-CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS
T ss_pred CCCcCCccCC-------EEEEEecCC-CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC
Confidence 3567999999 888877554 78999999999765 899999999999987643222367988763
No 10
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=98.97 E-value=1.3e-09 Score=73.09 Aligned_cols=63 Identities=22% Similarity=0.262 Sum_probs=48.1
Q ss_pred ecCceeeeeccccceeeEeeeccCCCCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCC----ceeEeec
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSR----KTAGVKG 77 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g----~W~~l~~ 77 (85)
++.||.|++ .|.|...+...-|.|+|||++.+ -|++||.+.|||..+......... +|+.|+.
T Consensus 55 ~t~nP~Wne-------~f~f~v~~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~ 122 (176)
T 3m7f_B 55 KSLNPKWNE-------EILFRVLPQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHP 122 (176)
T ss_dssp SCSSCEEEE-------EEEEEECTTTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBC
T ss_pred CCCCCcccc-------eEEEEEcCCCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccc
Confidence 477899999 88998887777899999999877 689999999999999874433222 7988874
No 11
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=98.96 E-value=3.8e-10 Score=72.04 Aligned_cols=59 Identities=19% Similarity=0.182 Sum_probs=50.5
Q ss_pred ecCceeeeeccccceeeEeeeccCCCCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
++.||.|++ +|.|...+...-|.|+|||++.. -|++||.+.+||..+.. +..+|..|+.
T Consensus 54 ~t~nP~wne-------~f~f~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~----~~~~w~~L~~ 113 (133)
T 2ep6_A 54 KNLNPEWNK-------VFTFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRD----GQPNCYVLKN 113 (133)
T ss_dssp SCSSCCCCE-------EEEEEESCTTCEEEEEEEEEETTEEEEECCBCEEEGGGCCS----SCCEECCCBC
T ss_pred CCCCCcccc-------EEEEEecCCCCEEEEEEEECCCCCCCCeeEEEEEEHHHccC----CCceEEEeec
Confidence 456899999 89999888888899999999988 58999999999999854 4458988864
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=98.94 E-value=3.9e-10 Score=71.91 Aligned_cols=62 Identities=15% Similarity=0.223 Sum_probs=48.5
Q ss_pred ecCceeeeeccccceeeEeeeccCCCCceEEEEeeCCeee----eceeeEEEeecCCeeeecCcCCCceeEeecc
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGIIW----DRAIGYHYLPLPQVAFSNEVGSRKTAGVKGL 78 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgviw----DdLLG~~~lPL~~v~~s~e~g~g~W~~l~~~ 78 (85)
++.||.||+ +|.|...+... |.|+|||++.+- |++||.+.|||..|....+.+ -+|..|.+.
T Consensus 48 ~t~nP~wne-------~f~f~v~~~~~-l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~-~~~~~L~~~ 113 (132)
T 3pyc_A 48 NTLDPKWNQ-------HYDLYVGKTDS-ITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTG-YQRLDLCKL 113 (132)
T ss_dssp SCSSCEEEE-------EEEEEEETTCC-EEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSC-CEEEECBCS
T ss_pred CCCCCCccC-------EEEEEeCCCCE-EEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccC-cEEEeeeec
Confidence 456899999 77777766544 999999999986 899999999999985544433 377777653
No 13
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=98.94 E-value=7.3e-10 Score=74.63 Aligned_cols=69 Identities=13% Similarity=0.045 Sum_probs=55.3
Q ss_pred eeeeeec-CceeeeeccccceeeEeeeccCCCCceEEEEe-eCCee-eeceeeEEEeecCCeeeecCcCCCceeEeeccc
Q psy8569 3 KESNVIG-SNFRWSVFSVKTRFEVPSETNDVNQGLLIEVW-DKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKGLF 79 (85)
Q Consensus 3 ~~~~v~g-~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVW-nKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~~~ 79 (85)
||-++++ .||.||+ +|.|.....+.-|.|+|| |.+.+ -|++||.+.|||..+.. +....+|..|+.--
T Consensus 71 kT~v~~~t~nP~wne-------~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~--~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 71 KTRIARKTLDPLYQQ-------SLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDL--SSMVIGWYKLFPPS 141 (171)
T ss_dssp ECCCCCSCSSCEEEE-------EEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCT--TSCEEEEEECBCGG
T ss_pred eCccCCCCCCCCCCc-------EEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHccc--CCCcceeEECCCcc
Confidence 3444444 5899999 999988766678999999 98887 47999999999999986 44567899988654
Q ss_pred c
Q psy8569 80 S 80 (85)
Q Consensus 80 ~ 80 (85)
+
T Consensus 142 ~ 142 (171)
T 2q3x_A 142 S 142 (171)
T ss_dssp G
T ss_pred c
Confidence 4
No 14
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.94 E-value=8.2e-10 Score=70.21 Aligned_cols=62 Identities=11% Similarity=0.153 Sum_probs=49.8
Q ss_pred eecCceeeeeccccceeeEeeeccC----CCCceEEEEeeCCeee---eceeeEEEeecCCeeeecCcCCCceeEeecc
Q psy8569 7 VIGSNFRWSVFSVKTRFEVPSETND----VNQGLLIEVWDKGIIW---DRAIGYHYLPLPQVAFSNEVGSRKTAGVKGL 78 (85)
Q Consensus 7 v~g~~P~W~~~~~~~~~~f~fet~d----~~~gL~vEVWnKgviw---DdLLG~~~lPL~~v~~s~e~g~g~W~~l~~~ 78 (85)
-++.||.||+ +|.|.... .+.-|.|+|||++.+- |++||.+.|||..+..+ +..+|+.|...
T Consensus 66 ~~t~nP~wne-------~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~---~~~~W~~L~~~ 134 (141)
T 1v27_A 66 KKTLEPKWNQ-------TFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLD---DEPHWYKLQTH 134 (141)
T ss_dssp SSCSSCCCCC-------CCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCS---SEEEEEECBCC
T ss_pred cCCCCCcccc-------EEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCC---CCCceEECccc
Confidence 3456899999 88888432 2358999999999987 99999999999998652 26789998764
No 15
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.93 E-value=7.8e-10 Score=70.82 Aligned_cols=61 Identities=16% Similarity=0.225 Sum_probs=49.4
Q ss_pred ecCceeeeeccccceeeEeee-c--cC-CCCceEEEEeeCCeee-eceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSE-T--ND-VNQGLLIEVWDKGIIW-DRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fe-t--~d-~~~gL~vEVWnKgviw-DdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
++.||.||+ +|.|. . .+ .+.-|.|+|||++.+- |++||.+.|||.++.. ......|+.|+.
T Consensus 73 ~t~nP~wne-------~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~--~~~~~~W~~L~~ 138 (142)
T 1rh8_A 73 KSLNPEWNQ-------TVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSH--LDNTPRWYPLKE 138 (142)
T ss_dssp HHHSCEEEE-------EEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGG--GTTCCEEEECBC
T ss_pred CCCCCCCCC-------EEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEecccccc--CCCCCeEEECCc
Confidence 456899999 88876 2 23 3458999999999874 8999999999999976 445679999875
No 16
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=98.92 E-value=6.5e-10 Score=71.48 Aligned_cols=65 Identities=14% Similarity=0.165 Sum_probs=51.0
Q ss_pred eeeeee-cCceeeeeccccceeeEeeecc--CC-CCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEee
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETN--DV-NQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVK 76 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~--d~-~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~ 76 (85)
||-.++ +.||.|++ +|.|... ++ +.-|.|+|||++.+ -|++||.+.+||..+.. +....+|..|+
T Consensus 72 kT~v~~~t~nP~wne-------~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~--~~~~~~W~~L~ 141 (143)
T 3f04_A 72 ETKVHRKTLNPVFNE-------QFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF--GHVTEEWRDLQ 141 (143)
T ss_dssp ECCCCCSCSSCEEEE-------EEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCT--TSCEEEEEECB
T ss_pred ECccCcCCCCCcCcC-------eEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccC--CCCcceEEECc
Confidence 344444 56899999 8888764 32 35799999999987 68999999999999976 55667898875
No 17
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=98.92 E-value=1.3e-09 Score=70.70 Aligned_cols=66 Identities=14% Similarity=0.062 Sum_probs=51.3
Q ss_pred eeeee-ecCceeeeeccccceeeEeee-cc--C-CCCceEEEEeeCCeee-eceeeEEEeecCCeeeecCcCCCceeEee
Q psy8569 3 KESNV-IGSNFRWSVFSVKTRFEVPSE-TN--D-VNQGLLIEVWDKGIIW-DRAIGYHYLPLPQVAFSNEVGSRKTAGVK 76 (85)
Q Consensus 3 ~~~~v-~g~~P~W~~~~~~~~~~f~fe-t~--d-~~~gL~vEVWnKgviw-DdLLG~~~lPL~~v~~s~e~g~g~W~~l~ 76 (85)
||-++ ++.||.||+ +|.|. +. + .+.-|.|+|||++.+- |++||.+.|||..+.. +.....|..|+
T Consensus 59 kT~v~~~t~nP~wnE-------~f~f~~v~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~--~~~~~~W~~L~ 129 (134)
T 2b3r_A 59 KTKISRKTRNPTFNE-------MLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNL--SKETVKWYQLT 129 (134)
T ss_dssp ECCCCCSCSSCEEEE-------EEEEESCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCT--TSCEEEEEECB
T ss_pred cCCcCcCCCCCCCcc-------EEEECCcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccC--CCCcceeEECC
Confidence 44444 456899999 88887 43 3 3458999999999875 7999999999999976 44557899887
Q ss_pred c
Q psy8569 77 G 77 (85)
Q Consensus 77 ~ 77 (85)
+
T Consensus 130 ~ 130 (134)
T 2b3r_A 130 A 130 (134)
T ss_dssp C
T ss_pred C
Confidence 5
No 18
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.90 E-value=1.6e-09 Score=70.86 Aligned_cols=66 Identities=14% Similarity=0.138 Sum_probs=51.2
Q ss_pred eeeeee-cCceeeeeccccceeeEeeeccC--C-CCceEEEEeeCCeee-eceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETND--V-NQGLLIEVWDKGIIW-DRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~d--~-~~gL~vEVWnKgviw-DdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
||-.++ +.||.||+ +|.|.... + +.-|.|+|||++.+- |++||.+.|||..+.. +..-.+|..|+.
T Consensus 80 kT~v~~~t~nP~wne-------~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~--~~~~~~W~~L~~ 150 (152)
T 1rsy_A 80 ETKVHRKTLNPVFNE-------QFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF--GHVTEEWRDLQS 150 (152)
T ss_dssp ECCCCTTCSSCEEEE-------EEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCC--SSCEEEEEECBC
T ss_pred eccccCCCCCCcCcc-------cEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccC--CCCcceEEECCC
Confidence 344444 45899999 88887643 2 568999999999874 8999999999999976 445578988764
No 19
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.89 E-value=2.5e-09 Score=69.40 Aligned_cols=66 Identities=11% Similarity=0.092 Sum_probs=51.1
Q ss_pred eeeee-ecCceeeeeccccceeeEeeeccC--C-CCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 3 KESNV-IGSNFRWSVFSVKTRFEVPSETND--V-NQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 3 ~~~~v-~g~~P~W~~~~~~~~~~f~fet~d--~-~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
||-++ ++.||.||+ +|.|.+.. + +.-|.|+|||.+.+ -||+||.+.|||.++.. +....+|..|+.
T Consensus 62 kT~v~~~tlnP~wnE-------~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~--~~~~~~W~~L~~ 132 (138)
T 1wfm_A 62 QTALKKRQLHTTWEE-------GLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSV--PLGAAQWGELKT 132 (138)
T ss_dssp ECCCCCCCSSEECSS-------CEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSS--CTTCCEEEECCC
T ss_pred ecccCcCCCCCcCCc-------eEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccC--cccccceeeCcC
Confidence 33333 456899999 77777643 2 34799999999976 57999999999999975 456788998875
No 20
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=1.9e-09 Score=69.33 Aligned_cols=62 Identities=21% Similarity=0.169 Sum_probs=50.1
Q ss_pred ecCceeeeeccccceeeEeeeccC----CCCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEeecc
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETND----VNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKGL 78 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d----~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~~ 78 (85)
++.||.||+ +|.|+... ...-|.|+|||++.+ -|++||.+.|||..+.. +.....|+.|+..
T Consensus 70 ~t~nP~wne-------~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~--~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 70 KNLNPHWNE-------TFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDL--TQMQTFWKDLKPS 136 (141)
T ss_dssp TCSSCCCCE-------EEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCT--TSCEEEEECCEEC
T ss_pred CCCCCcccc-------EEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcC--CCCccEEEECcCC
Confidence 456899999 88887522 245799999999987 48999999999999977 4466789988753
No 21
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=98.88 E-value=8.8e-10 Score=71.67 Aligned_cols=66 Identities=15% Similarity=0.147 Sum_probs=51.7
Q ss_pred eeeeee-cCceeeeeccccceeeEeeeccCCC---CceEEEEeeCCeee-eceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETNDVN---QGLLIEVWDKGIIW-DRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~d~~---~gL~vEVWnKgviw-DdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
||..++ ..||.||+ +|.|.....+ .-|.|+|||.+.+- |++||.+.|||+++... ....+|+.|.+
T Consensus 64 kT~v~~~t~nP~wne-------~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~--~~~~~W~~L~~ 134 (148)
T 3fdw_A 64 KTSIKRDTVNPLYDE-------TLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLD--KKLDHCLPLHG 134 (148)
T ss_dssp ECCCCSSCSSCEEEE-------EEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHH--CCSEEEEECBC
T ss_pred ccccCCCCCCCcEee-------EEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEccccccc--CCccceEECcC
Confidence 444455 56899999 8888765432 35999999999875 89999999999999773 35568999875
No 22
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.87 E-value=1.1e-09 Score=71.32 Aligned_cols=60 Identities=13% Similarity=0.251 Sum_probs=48.6
Q ss_pred ecCceeeeeccccceeeEeeeccC--CCCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETND--VNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d--~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
++.||.|++ +|.|...+ .+.-|.|+|||++.+ -|++||.+.|||..+..+ ...+|+.|..
T Consensus 77 ~t~nP~wne-------~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~---~~~~W~~L~~ 139 (149)
T 1a25_A 77 CSLNPEWNE-------TFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA---GVDGWFKLLS 139 (149)
T ss_dssp SCSSCEEEE-------EEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC---CEEEEEECBC
T ss_pred CCCCCcCCc-------EEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC---ccCCeEEccC
Confidence 356899999 77777754 456799999999988 589999999999998763 3568988863
No 23
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=2.2e-09 Score=68.97 Aligned_cols=70 Identities=14% Similarity=0.058 Sum_probs=52.5
Q ss_pred eeeee-ecCceeeeeccccceeeEeeeccC--C-CCceEEEEeeCCeee---eceeeEEEeecCCeeeecCcCCCceeEe
Q psy8569 3 KESNV-IGSNFRWSVFSVKTRFEVPSETND--V-NQGLLIEVWDKGIIW---DRAIGYHYLPLPQVAFSNEVGSRKTAGV 75 (85)
Q Consensus 3 ~~~~v-~g~~P~W~~~~~~~~~~f~fet~d--~-~~gL~vEVWnKgviw---DdLLG~~~lPL~~v~~s~e~g~g~W~~l 75 (85)
||-++ ++.||.||+ +|.|.+.. + +.-|.|+|||++.+- |++||.+.|||..+..+ ....+|..|
T Consensus 63 kT~v~~~t~nP~wne-------~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~--~~~~~W~~L 133 (142)
T 2dmg_A 63 KTHVSKKTLNPVFDQ-------SFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELA--KGWTQWYDL 133 (142)
T ss_dssp ECCCCCSCSSCEEEE-------EEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTT--TCBCCBCCC
T ss_pred cCCccCCCCCCCcCc-------eEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEeccccccc--ccccceeec
Confidence 34444 456899999 88887633 2 247999999999875 57999999999998773 367789988
Q ss_pred eccccc
Q psy8569 76 KGLFSP 81 (85)
Q Consensus 76 ~~~~~~ 81 (85)
..--.|
T Consensus 134 ~~~~~~ 139 (142)
T 2dmg_A 134 TEDSGP 139 (142)
T ss_dssp BCSCSC
T ss_pred cCCCCC
Confidence 765333
No 24
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=98.84 E-value=2e-09 Score=70.78 Aligned_cols=67 Identities=15% Similarity=0.121 Sum_probs=51.0
Q ss_pred eeeee-ecCceeeeeccccceeeEeeec--cCCCCceEEEEeeCCeee--eceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 3 KESNV-IGSNFRWSVFSVKTRFEVPSET--NDVNQGLLIEVWDKGIIW--DRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 3 ~~~~v-~g~~P~W~~~~~~~~~~f~fet--~d~~~gL~vEVWnKgviw--DdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
||.++ ++.||.||+ +|.|.. .+...-|.|+|||++.+- |++||.+.+||..+.... .....|..|..
T Consensus 66 kT~v~~~t~nP~wne-------~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~-~~~~~W~~L~~ 137 (153)
T 3fbk_A 66 KTQTVPDCRDPAFHE-------HFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPD-KEISGWYYLLG 137 (153)
T ss_dssp ECCCCTTCSSCEEEE-------EEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC---CCEEEEEECBC
T ss_pred eccccCCCCCCcccc-------EEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCC-CccccEEECCC
Confidence 34444 466899999 777777 677667999999999873 899999999999996532 34457988864
No 25
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=98.81 E-value=1.3e-09 Score=75.33 Aligned_cols=62 Identities=10% Similarity=0.055 Sum_probs=50.4
Q ss_pred ecCceeeeeccccceeeEeeeccCCCCceEEEEeeCCeee-eceeeEEEeecCCeeee--cCcCCCceeEeec
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGIIW-DRAIGYHYLPLPQVAFS--NEVGSRKTAGVKG 77 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgviw-DdLLG~~~lPL~~v~~s--~e~g~g~W~~l~~ 77 (85)
+..||.||| +|.|+..+ .+-|.|+|||++.+- ||+||.+.|||..|... .......|+.|+.
T Consensus 81 ktlnP~WNE-------~F~f~v~~-~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~ 145 (157)
T 2fk9_A 81 KTNKPTYNE-------EFCANVTD-GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP 145 (157)
T ss_dssp SCSSCEEEE-------EEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS
T ss_pred CCCCCccCc-------EEEEEcCC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC
Confidence 467899999 88888754 457999999999775 89999999999998864 2245678998864
No 26
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=98.81 E-value=2.3e-09 Score=67.81 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=49.8
Q ss_pred eeeeee-cCceeeeeccccceeeEeeecc--CCCCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETN--DVNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~--d~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
||-.++ +.||.|++ +|.|... +.+.-|.|+|||++.+ -|++||.+.+||+.+... . ..+|..|..
T Consensus 56 kT~~~~~t~nP~wne-------~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~--~-~~~W~~L~~ 124 (137)
T 3rdl_A 56 KTKTIRSTLNPQWNE-------SFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKM--P-ASGWYKLLN 124 (137)
T ss_dssp ECCCCCSCSSCEEEE-------EEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHS--C-EEEEEECBC
T ss_pred cCceEcCCCCCCccc-------EEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccC--c-cCceEECcC
Confidence 344444 56899999 7777663 4555799999999877 589999999999999652 2 678988853
No 27
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=2.7e-09 Score=69.06 Aligned_cols=67 Identities=16% Similarity=0.053 Sum_probs=50.7
Q ss_pred eeeee-ecCceeeeeccccceeeEeeeccC--C-CCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 3 KESNV-IGSNFRWSVFSVKTRFEVPSETND--V-NQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 3 ~~~~v-~g~~P~W~~~~~~~~~~f~fet~d--~-~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
||-++ ++.||.||+ +|.|.... + ..-|.|+|||++.+ -|++||.+.|||..+.. ......|..|+.
T Consensus 71 kT~v~~~t~nP~wne-------~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~--~~~~~~w~~L~~ 141 (147)
T 2enp_A 71 QTGVKRKTQKPVFEE-------RYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDL--VKGGHWWKALIP 141 (147)
T ss_dssp ECCCCCSCSSCCCCB-------CCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCT--TTCCCEEECCBC
T ss_pred EeecccCCCCCeEee-------eEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCC--CCCccEEEEeec
Confidence 34344 456899999 78887643 2 24799999999976 47899999999999976 344578888875
Q ss_pred c
Q psy8569 78 L 78 (85)
Q Consensus 78 ~ 78 (85)
-
T Consensus 142 ~ 142 (147)
T 2enp_A 142 S 142 (147)
T ss_dssp C
T ss_pred C
Confidence 4
No 28
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.77 E-value=7.9e-09 Score=66.24 Aligned_cols=63 Identities=11% Similarity=0.043 Sum_probs=46.6
Q ss_pred ecCceeeeeccccceeeEeee-ccC--C-CCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEeecc
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSE-TND--V-NQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKGL 78 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fe-t~d--~-~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~~ 78 (85)
++.||.||+ +|.|. ... + +.-|.|+|||++.+ -|++||.+.|||..+..+.+. ...|..|+.-
T Consensus 67 ~t~nP~wne-------~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~-~~~~~~l~~~ 134 (138)
T 1ugk_A 67 KTLDPAFDE-------TFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGK-MLMNREIISG 134 (138)
T ss_dssp SCSSCEEEE-------EEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCC-EEEEEECBSS
T ss_pred CCCCCcEee-------EEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCc-chhhhhhhcC
Confidence 456899999 88884 432 2 34799999999987 579999999999999874322 1345777653
No 29
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=98.75 E-value=4.6e-09 Score=67.44 Aligned_cols=60 Identities=17% Similarity=0.200 Sum_probs=46.5
Q ss_pred ecCceeeeeccccceeeEeee-c--cCC-CCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEee
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSE-T--NDV-NQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVK 76 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fe-t--~d~-~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~ 76 (85)
++.||.|++ +|.|. . .++ ..-|.|+|||++.+ -|++||.+.+||+.+.. +.....|..|+
T Consensus 75 ~t~nP~wne-------~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~--~~~~~~~~~L~ 139 (142)
T 2chd_A 75 NTRNPVWNE-------TLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKA--NQRKNFNICLE 139 (142)
T ss_dssp SCSSCEEEE-------EEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCT--TCCEEEEEECB
T ss_pred CCCCCcCcC-------EEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCC--CCccEEEEecc
Confidence 466899999 77776 3 233 25799999999987 47999999999999876 44566666665
No 30
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=98.71 E-value=7.7e-09 Score=71.03 Aligned_cols=63 Identities=17% Similarity=0.167 Sum_probs=48.5
Q ss_pred ecCceeeeeccccceeeEeeeccCCCCceEEEEeeCCee-eeceeeEEEeecCCeeeecC-cCC--CceeEeecc
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNE-VGS--RKTAGVKGL 78 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e-~g~--g~W~~l~~~ 78 (85)
++.||.||+ +|.|.... .+-|.|+|||++.+ -||+||.+.+||..+..... ... ..|..|+.-
T Consensus 77 ~tlnP~Wne-------~f~f~v~~-~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~ 143 (173)
T 2nq3_A 77 NTNSPKWKQ-------PLTVIVTP-VSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD 143 (173)
T ss_dssp SCSSCEEEE-------EEEEEECT-TCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES
T ss_pred CCCCCeECC-------EEEEEeCC-CCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC
Confidence 456899999 88887654 77899999999987 68999999999999865321 111 458887753
No 31
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=98.71 E-value=1.1e-08 Score=67.06 Aligned_cols=63 Identities=13% Similarity=0.012 Sum_probs=46.9
Q ss_pred ecCceeeeeccccceeeEeeeccCC---CCceEEEEeeCCeee-eceeeEEEeecCCee----------eecCcCCCcee
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETNDV---NQGLLIEVWDKGIIW-DRAIGYHYLPLPQVA----------FSNEVGSRKTA 73 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d~---~~gL~vEVWnKgviw-DdLLG~~~lPL~~v~----------~s~e~g~g~W~ 73 (85)
++.||.||+ +|.|.+... +.-|.|+|||++.+- |++||.+.|||..+. .+......+|+
T Consensus 71 ~t~nP~wne-------~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~ 143 (159)
T 1tjx_A 71 NTLNPYYNE-------SFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWH 143 (159)
T ss_dssp SCSSCEEEE-------EEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEE
T ss_pred CCCCCcccc-------eEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEE
Confidence 456899999 888876433 346999999999874 899999999999752 12233445788
Q ss_pred Eeec
Q psy8569 74 GVKG 77 (85)
Q Consensus 74 ~l~~ 77 (85)
.|..
T Consensus 144 ~L~~ 147 (159)
T 1tjx_A 144 TLQV 147 (159)
T ss_dssp ECBC
T ss_pred ECcC
Confidence 8764
No 32
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=98.71 E-value=1.6e-08 Score=65.73 Aligned_cols=51 Identities=14% Similarity=-0.046 Sum_probs=40.2
Q ss_pred eeeee-ecCceeeeeccccceeeEeeeccCC--C-CceEEEEeeCCee-eeceeeEEEeecCC
Q psy8569 3 KESNV-IGSNFRWSVFSVKTRFEVPSETNDV--N-QGLLIEVWDKGII-WDRAIGYHYLPLPQ 60 (85)
Q Consensus 3 ~~~~v-~g~~P~W~~~~~~~~~~f~fet~d~--~-~gL~vEVWnKgvi-wDdLLG~~~lPL~~ 60 (85)
||-.+ ++.||.||+ +|.|.+... . .-|.|+|||++.+ -|++||.+.|||+.
T Consensus 70 kT~v~~~t~nP~wne-------~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 70 KTHVKKCTPNAVFNE-------LFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp ECCCCCSCSSEEEEE-------EEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred ecCcccCCCCCeecc-------eEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 44444 455899999 787776543 2 4699999999987 58999999999987
No 33
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=98.69 E-value=1.1e-08 Score=64.58 Aligned_cols=53 Identities=19% Similarity=0.188 Sum_probs=41.2
Q ss_pred eeeeee-cCceeeeeccccceeeEeeeccCCC---CceEEEEeeCCee-eeceeeEEEeecCCee
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETNDVN---QGLLIEVWDKGII-WDRAIGYHYLPLPQVA 62 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~d~~---~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~ 62 (85)
||..++ +.||.||+ +|.|+..... .-|.|+|||++.+ -|++||.+.|||.++.
T Consensus 56 kT~~~~~t~nP~wne-------~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 56 KTVTKKRNLNPIFNE-------SFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp ECCCCSSCSSCEEEE-------EEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred eCccccCCCCCcCcc-------eEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 343444 56899999 8888764433 4699999999987 5899999999999753
No 34
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=98.66 E-value=3.7e-08 Score=69.15 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=50.4
Q ss_pred eeeeeec-CceeeeeccccceeeEeeeccC--C-CCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 3 KESNVIG-SNFRWSVFSVKTRFEVPSETND--V-NQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 3 ~~~~v~g-~~P~W~~~~~~~~~~f~fet~d--~-~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
||-++++ .||.||+ +|.|.... + ..-|.|+|||.+.+ -|++||.+.+||..+.. +..-..|..|..
T Consensus 57 ~T~~~~~~~nP~wne-------~f~f~v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~--~~~~~~w~~L~~ 127 (284)
T 2r83_A 57 ETKVHRKTLNPVFNE-------QFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF--GHVTEEWRDLQS 127 (284)
T ss_dssp ECCCCCSCSSCEEEE-------EEEECCCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCC--SSCEEEEEECBC
T ss_pred eCCcccCCCCCeeCc-------eEEEEechHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhccc--CCcceeEEEeec
Confidence 3444444 5899999 88887643 3 35899999999987 48999999999999976 344567887753
No 35
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=98.59 E-value=4.7e-08 Score=65.90 Aligned_cols=66 Identities=11% Similarity=0.078 Sum_probs=49.5
Q ss_pred eeeee-ecCceeeeeccccceeeEeeeccCC---CCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEee
Q psy8569 3 KESNV-IGSNFRWSVFSVKTRFEVPSETNDV---NQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVK 76 (85)
Q Consensus 3 ~~~~v-~g~~P~W~~~~~~~~~~f~fet~d~---~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~ 76 (85)
||-.+ +..||.||+ +|.|.+... +.-|.|+|||.|.. =||+||.+.|||+++..+ .....+|+.|.
T Consensus 84 kT~v~~~tlnP~wnE-------~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~-~~~~~~W~~L~ 154 (155)
T 2z0u_A 84 RTRPLDASDTLVFNE-------VFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRS-GERSTRWYNLL 154 (155)
T ss_dssp ECCCEECCSSEEEEE-------EEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTT-CCCEEEEEEEB
T ss_pred eCCcCCCCCCCcccc-------EEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCC-CCccccceEcc
Confidence 44444 456899999 888876432 45799999999865 589999999999999632 34556888763
No 36
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=98.55 E-value=8.5e-08 Score=63.45 Aligned_cols=47 Identities=23% Similarity=0.223 Sum_probs=38.9
Q ss_pred ecCceeeeeccccceeeEeeeccC--C-CCceEEEEeeCCee-eeceeeEEEeecCCe
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETND--V-NQGLLIEVWDKGII-WDRAIGYHYLPLPQV 61 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d--~-~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v 61 (85)
++.||.||+ +|.|.... + +.-|.|+|||++.+ -|++||.+.|||..+
T Consensus 83 ~t~nP~wne-------~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 83 KTLNPEFNE-------EFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp SCSSCEEEE-------EEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred CCCCCcccc-------eEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence 456899999 77777643 2 45899999999987 479999999999985
No 37
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=98.39 E-value=3.1e-07 Score=77.39 Aligned_cols=61 Identities=11% Similarity=0.080 Sum_probs=51.7
Q ss_pred ecCceeeeeccccceeeEeeeccC-CCCceEEEEeeCCeeeeceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 8 IGSNFRWSVFSVKTRFEVPSETND-VNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 8 ~g~~P~W~~~~~~~~~~f~fet~d-~~~gL~vEVWnKgviwDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
++.||.||+ +|.|...+ ...-|.|+|||+|.+-||+||.+.|||..|.. +.....|..|++
T Consensus 65 ~tlNPvWNE-------tF~F~v~~~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~--g~~~~~w~~L~~ 126 (749)
T 1cjy_A 65 NDINPVWNE-------TFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKV--GEKKEVPFIFNQ 126 (749)
T ss_dssp TCSSCEEEE-------EEEEEECTTSCCBCEEEEEECCSSSCEEEEEECCBSTTSCT--TCCCCEEEEETT
T ss_pred CCCCCeeee-------EEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHcCC--CCceEEEEecCC
Confidence 467899999 88888866 45589999999998779999999999999965 566788998864
No 38
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=98.35 E-value=4.6e-07 Score=63.56 Aligned_cols=68 Identities=13% Similarity=0.017 Sum_probs=48.4
Q ss_pred eeeeee-cCceeeeeccccceeeEeeeccCCC---CceEEEEeeCCee-eeceeeEEEeecCCeee----------ecCc
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETNDVN---QGLLIEVWDKGII-WDRAIGYHYLPLPQVAF----------SNEV 67 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~d~~---~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~----------s~e~ 67 (85)
||-.++ ..||.||+ .|.|.....+ .-|.|+|||.+.+ -|++||.|.|||+++.. +...
T Consensus 190 kT~v~~~t~nP~wne-------~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~ 262 (284)
T 2r83_A 190 KTTIKKNTLNPYYNE-------SFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRR 262 (284)
T ss_dssp ECCCCCSCSSCEEEE-------EEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTS
T ss_pred ccceecCCCCCEEce-------eEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCC
Confidence 343444 46899999 8888774332 2599999999976 68999999999987532 1122
Q ss_pred CCCceeEeec
Q psy8569 68 GSRKTAGVKG 77 (85)
Q Consensus 68 g~g~W~~l~~ 77 (85)
...+|+.|++
T Consensus 263 ~~~~W~~L~~ 272 (284)
T 2r83_A 263 PIAQWHTLQV 272 (284)
T ss_dssp CEEEEEECBC
T ss_pred chheeeecCC
Confidence 3357888875
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=98.33 E-value=2.7e-07 Score=69.66 Aligned_cols=65 Identities=17% Similarity=0.264 Sum_probs=49.5
Q ss_pred eecCceeeeeccccceeeEeeeccCCCC-ceEEEEeeCCeee-eceeeEEEeecCCeeeecC-cC-CCceeEeecc
Q psy8569 7 VIGSNFRWSVFSVKTRFEVPSETNDVNQ-GLLIEVWDKGIIW-DRAIGYHYLPLPQVAFSNE-VG-SRKTAGVKGL 78 (85)
Q Consensus 7 v~g~~P~W~~~~~~~~~~f~fet~d~~~-gL~vEVWnKgviw-DdLLG~~~lPL~~v~~s~e-~g-~g~W~~l~~~ 78 (85)
-++.||.|++ +|.|...+... -|.|+|||+|..- ||+||.+.+||+.+....+ .+ -..|..+++-
T Consensus 427 ~~t~nP~w~e-------~f~f~~~~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~ 495 (510)
T 3jzy_A 427 QDTLNPKWNF-------NCQFFIKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV 495 (510)
T ss_dssp SSCSSCEEEE-------EEEEEESCTTTCEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS
T ss_pred CCCCCCccCc-------eEEEEecCCCCCEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC
Confidence 3467899999 88888765553 5999999999875 7999999999999876321 11 3567777653
No 40
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.21 E-value=2.1e-07 Score=72.88 Aligned_cols=66 Identities=9% Similarity=0.043 Sum_probs=10.0
Q ss_pred eeeeeec----CceeeeeccccceeeEeeeccCCCCceEEEEeeC-C----eeeeceeeEEEeecCCeeeecCcCCCcee
Q psy8569 3 KESNVIG----SNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDK-G----IIWDRAIGYHYLPLPQVAFSNEVGSRKTA 73 (85)
Q Consensus 3 ~~~~v~g----~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnK-g----viwDdLLG~~~lPL~~v~~s~e~g~g~W~ 73 (85)
||-+++. .||.||+ +|.|......+-|.|+|||+ + +.-|++||.+.|||.++.. +....+|+
T Consensus 42 kT~v~~kt~~glnP~WnE-------~F~f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~--~~~~~~W~ 112 (483)
T 3bxj_A 42 RTTSKPRSASGDTVFWGE-------HFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAG--RHFTEQWY 112 (483)
T ss_dssp -----------------C-------CEECC--------------------------------------------CCEECC
T ss_pred eeeEEeCCCCCCCCcccc-------EEEEecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcC--CCCCCeEE
Confidence 4555554 6999999 88888544457899999995 3 5789999999999999986 44567898
Q ss_pred Eeec
Q psy8569 74 GVKG 77 (85)
Q Consensus 74 ~l~~ 77 (85)
.|.+
T Consensus 113 ~L~~ 116 (483)
T 3bxj_A 113 PVTL 116 (483)
T ss_dssp ----
T ss_pred ECCC
Confidence 8854
No 41
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=98.19 E-value=1.2e-06 Score=70.82 Aligned_cols=48 Identities=23% Similarity=0.317 Sum_probs=39.5
Q ss_pred eeecCceeeeeccccceeeEeeeccC--CCCceEEEEeeCCeeee-ceeeEEEeecCC
Q psy8569 6 NVIGSNFRWSVFSVKTRFEVPSETND--VNQGLLIEVWDKGIIWD-RAIGYHYLPLPQ 60 (85)
Q Consensus 6 ~v~g~~P~W~~~~~~~~~~f~fet~d--~~~gL~vEVWnKgviwD-dLLG~~~lPL~~ 60 (85)
.-+..||.||+ +|.|...+ .++-|.|||||+|...+ |+||.+.+||..
T Consensus 432 ik~tlNP~Wne-------~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~~ 482 (540)
T 3nsj_A 432 VWNNNNPRWTD-------KMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPHS 482 (540)
T ss_dssp BCSCSSCBCCC-------CEEEEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCCS
T ss_pred ecCCCCCCCCe-------EEEEEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEeeC
Confidence 33466899999 78887543 56679999999999876 999999999983
No 42
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=98.06 E-value=3.4e-06 Score=68.73 Aligned_cols=63 Identities=16% Similarity=0.138 Sum_probs=47.7
Q ss_pred eeeeeec--CceeeeeccccceeeEeeeccCCC-CceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEeec
Q psy8569 3 KESNVIG--SNFRWSVFSVKTRFEVPSETNDVN-QGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGVKG 77 (85)
Q Consensus 3 ~~~~v~g--~~P~W~~~~~~~~~~f~fet~d~~-~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l~~ 77 (85)
||-+++. .||.||+ +|.|.....+ .-|+|+|||.+.+ -||+||.+.|||..|.. +. .|+-|..
T Consensus 539 kTkvi~~ng~NP~WnE-------~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~--G~---r~v~L~d 605 (624)
T 1djx_A 539 QTAVITNNGFNPRWDM-------EFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQ--GY---RHVHLLS 605 (624)
T ss_dssp ECCCCTTCSSSCEEEE-------EEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCC--EE---EEEEEEC
T ss_pred ecccccCCCCCCccCc-------eEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCC--Cc---EEEeCCC
Confidence 5656665 5999999 7777664433 4699999999977 68999999999999976 21 3666643
No 43
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=97.96 E-value=2.1e-06 Score=61.57 Aligned_cols=68 Identities=18% Similarity=0.048 Sum_probs=48.4
Q ss_pred eeeeee-cCceeeeeccccceeeEeeeccCC---CCceEEEEeeCCee-eeceeeEEEeecCCeee-----------ecC
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETNDV---NQGLLIEVWDKGII-WDRAIGYHYLPLPQVAF-----------SNE 66 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~d~---~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~-----------s~e 66 (85)
||..++ ..||.||+ .|.|..... +.-|.|+|||.+.. -|++||.+.|||+.+.. +..
T Consensus 192 kT~v~~~t~nP~wne-------~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~ 264 (296)
T 1dqv_A 192 KTSIKKNTLNPTYNE-------ALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPR 264 (296)
T ss_dssp ECCCCCSCSSCEEEE-------CCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSS
T ss_pred ecceecCCCCCeECc-------eEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCC
Confidence 454444 45799999 777776432 23799999999976 68999999999997643 123
Q ss_pred cCCCceeEeec
Q psy8569 67 VGSRKTAGVKG 77 (85)
Q Consensus 67 ~g~g~W~~l~~ 77 (85)
....+|+.|..
T Consensus 265 ~~~~~w~~L~~ 275 (296)
T 1dqv_A 265 KPVEHWHQLVE 275 (296)
T ss_dssp SCSCSCCCCBB
T ss_pred CceeEeeeccC
Confidence 34456776654
No 44
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=97.93 E-value=6.8e-06 Score=70.51 Aligned_cols=51 Identities=18% Similarity=0.281 Sum_probs=39.9
Q ss_pred eeeeee--cCceeeeeccccceee-Eeee-c-cCCCCceEEEEeeCCeeeeceeeEEEeecCCeee
Q psy8569 3 KESNVI--GSNFRWSVFSVKTRFE-VPSE-T-NDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAF 63 (85)
Q Consensus 3 ~~~~v~--g~~P~W~~~~~~~~~~-f~fe-t-~d~~~gL~vEVWnKgviwDdLLG~~~lPL~~v~~ 63 (85)
||-+|+ |.||.||+ + |.|. + ...-.-|+|+|||.| ||+||.+.|||.+|+.
T Consensus 762 kTkvi~~NglNPvWnE-------e~F~F~~V~~pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~ 817 (885)
T 3ohm_B 762 RTRTSQGNSFNPVWDE-------EPFDFPKVVLPTLASLRIAAFEEG---GKFVGHRILPVSAIRS 817 (885)
T ss_dssp CCCCCSSCSSSCBCCC-------CCEEEEEESCGGGCEEEEEEEETT---TEEEEEEEEETTTCCC
T ss_pred eeEEeeCCCcCCeecc-------ceeEEeeEEcCCcCEEEEEEEcCC---ccEEeeEEEEHHHcCC
Confidence 566665 57999998 5 6666 3 222235999999999 9999999999999875
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=97.92 E-value=1.3e-05 Score=57.48 Aligned_cols=66 Identities=14% Similarity=-0.006 Sum_probs=44.9
Q ss_pred eeeeee-cCceeeeeccccceeeEeeeccCC---CCceEEEEeeCCee-eeceeeEEEee-cCCeeeecCcCCCceeEee
Q psy8569 3 KESNVI-GSNFRWSVFSVKTRFEVPSETNDV---NQGLLIEVWDKGII-WDRAIGYHYLP-LPQVAFSNEVGSRKTAGVK 76 (85)
Q Consensus 3 ~~~~v~-g~~P~W~~~~~~~~~~f~fet~d~---~~gL~vEVWnKgvi-wDdLLG~~~lP-L~~v~~s~e~g~g~W~~l~ 76 (85)
||-+++ +.||.|++ +|.|..... +.-|.|+|||.+.+ -|++||.+.+| |..+... ......|..|.
T Consensus 58 kT~v~~~t~nP~wne-------~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~-~~~~~~w~~L~ 129 (296)
T 1dqv_A 58 QTKVHRKTLNPIFNE-------TFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQ-PPDRPLWRDIL 129 (296)
T ss_dssp ECCCCCSCSSCEEEE-------EEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSS-CSSCCCCEECB
T ss_pred eCCccCCCCCCcEee-------EEEEEecHHHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccC-Cccceeeeccc
Confidence 444444 57899999 888876432 34799999999976 48999999996 4333221 22344677764
No 46
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=97.80 E-value=1.7e-05 Score=67.40 Aligned_cols=51 Identities=16% Similarity=0.094 Sum_probs=40.1
Q ss_pred eeeeee--cCceeeeeccccceee-Eeee-ccCC-CCceEEEEeeCCeeeeceeeEEEeecCCeee
Q psy8569 3 KESNVI--GSNFRWSVFSVKTRFE-VPSE-TNDV-NQGLLIEVWDKGIIWDRAIGYHYLPLPQVAF 63 (85)
Q Consensus 3 ~~~~v~--g~~P~W~~~~~~~~~~-f~fe-t~d~-~~gL~vEVWnKgviwDdLLG~~~lPL~~v~~ 63 (85)
||-+|+ |.||.||+ + |.|. +... -.=|+|+|||.+ ||+||.+.|||+.|+.
T Consensus 688 kTkvv~~nglNPvWNE-------~~F~F~~v~~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~~ 743 (816)
T 3qr0_A 688 KTKIIENNGMDPYYDE-------KVFVFKKVVLPDLAVVRIIVSEEN---GKFIGHRVMPLDGIKP 743 (816)
T ss_dssp ECCCBCSCSSCCBCCC-------CCEEEEEESCGGGCEEEEEEEETT---SCEEEEEEEESTTCCC
T ss_pred eeEEecCCCCCCeEcC-------ceeEEccccCCCccEEEEEEEecC---CCeeeEEEEEHHHcCC
Confidence 566666 46999999 6 7776 4222 236999999987 9999999999999875
No 47
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=97.63 E-value=3.1e-05 Score=65.08 Aligned_cols=50 Identities=16% Similarity=0.339 Sum_probs=38.9
Q ss_pred eee-eee--cCceeeeeccccceee-Eee-ec--cCCCCceEEEEeeCCeeeeceeeEEEeecCCeee
Q psy8569 3 KES-NVI--GSNFRWSVFSVKTRFE-VPS-ET--NDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAF 63 (85)
Q Consensus 3 ~~~-~v~--g~~P~W~~~~~~~~~~-f~f-et--~d~~~gL~vEVWnKgviwDdLLG~~~lPL~~v~~ 63 (85)
||- +|+ |.||.||+ + |.| .+ .++. -|+|+|||.+ ||+||.+.|||+.|..
T Consensus 715 kTk~vv~~n~~NPvWnE-------e~f~F~~v~~~el~-~Lr~~V~D~d---~d~iG~~~ipl~~L~~ 771 (799)
T 2zkm_X 715 RTKLSPSTNSINPVWKE-------EPFVFEKILMPELA-SLRVAVMEEG---NKFLGHRIIPINALNS 771 (799)
T ss_dssp ECCCCSSSCCSSCBCCC-------CCEEEEEESSGGGC-EEEEEEEETT---TEEEEEEEEEGGGBCC
T ss_pred eecccccCCCCCCeeec-------ceEEEEEEccCCcc-EEEEEEEEeC---CCccceEeeehhhcCC
Confidence 454 565 46999998 5 666 33 2322 6999999998 9999999999999975
No 48
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.54 E-value=3.4e-05 Score=61.70 Aligned_cols=63 Identities=16% Similarity=0.291 Sum_probs=46.5
Q ss_pred eeeee-ecCceeeeeccccceeeEeeecc--CCCCceEEEEeeCCee-eeceeeEEEeecCCeeeecCcCCCceeEe
Q psy8569 3 KESNV-IGSNFRWSVFSVKTRFEVPSETN--DVNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFSNEVGSRKTAGV 75 (85)
Q Consensus 3 ~~~~v-~g~~P~W~~~~~~~~~~f~fet~--d~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s~e~g~g~W~~l 75 (85)
||..+ +..||.||+ .|.|... +.+.-|.|||||.+.. -||+||.+.+||+.+... +...|..+
T Consensus 212 kT~v~~~tlnP~wne-------~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~---~~~~w~~L 278 (674)
T 3pfq_A 212 KTKTIKSSLNPEWNE-------TFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA---GVDGWFKL 278 (674)
T ss_dssp ECCCCSSCSSCEEEE-------EEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHC---CEEEEEEC
T ss_pred cccccccccCCCccc-------eeeeecccCCccceeeeEEeecccccccccccccccchhhhccC---Ccccceee
Confidence 33344 456799999 6666654 4455699999999877 469999999999998763 23667665
No 49
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=96.66 E-value=0.0018 Score=45.78 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=41.6
Q ss_pred eeeeee--cCceeeeeccccceeeEeeecc-CCCCceEEEEeeCCee-eeceeeEEEeecCCeeee
Q psy8569 3 KESNVI--GSNFRWSVFSVKTRFEVPSETN-DVNQGLLIEVWDKGII-WDRAIGYHYLPLPQVAFS 64 (85)
Q Consensus 3 ~~~~v~--g~~P~W~~~~~~~~~~f~fet~-d~~~gL~vEVWnKgvi-wDdLLG~~~lPL~~v~~s 64 (85)
||-.++ +.||.||| .|+|+..-+ |-+.-|.|.|.|-+-+ =|++||++.|||+.|..+
T Consensus 51 kTkvi~~~~~npvfnE-----~F~wpl~~~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~ 111 (144)
T 3l9b_A 51 YSRVLENCEDVADFDE-----TFRWPVASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEE 111 (144)
T ss_dssp ECCCEEEECSCEEEEE-----EEEEEESSCCCTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHH
T ss_pred eeEEeccCCCCceEcc-----eEEecCCCCCCCCCEEEEEEEECccccCCCEEEEEEEEhHHhccC
Confidence 566675 88999999 444444442 3333699999987765 579999999999887653
No 50
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=89.75 E-value=0.16 Score=35.81 Aligned_cols=57 Identities=18% Similarity=0.105 Sum_probs=44.6
Q ss_pred cCceeeeeccccceeeEeeeccCCCCceEEEEeeCCeeeeceeeEEEeecCCeeee---cCcCCCceeEee
Q psy8569 9 GSNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFS---NEVGSRKTAGVK 76 (85)
Q Consensus 9 g~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgviwDdLLG~~~lPL~~v~~s---~e~g~g~W~~l~ 76 (85)
-+.|.|++ +|.-++.+ ..-|.|-|-.+.. +++.-|.|+|..|... ++....-|+.||
T Consensus 58 T~~P~Wne-------~Fd~~V~~-Gr~l~i~Vfh~a~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe 117 (138)
T 2enj_A 58 TMYPPWDS-------TFDAHINK-GRVMQIIVKGKNV---DLISETTVELYSLAERCRKNNGKTEIWLELK 117 (138)
T ss_dssp EECCCSSS-------EEEECCCS-SCEEEEEEECSSC---SCCEEEEEESHHHHHHHHHTTTCEEEEEECB
T ss_pred CCCccccc-------eEeeeEEC-CeEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCCCceEEEEecc
Confidence 35799999 88877544 3347777888777 9999999999999865 455668898887
No 51
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=89.45 E-value=0.13 Score=35.71 Aligned_cols=56 Identities=7% Similarity=0.028 Sum_probs=43.8
Q ss_pred CceeeeeccccceeeEeeeccCCCCceEEEEeeCCeeeeceeeEEEeecCCeeee---cCcCCCceeEee
Q psy8569 10 SNFRWSVFSVKTRFEVPSETNDVNQGLLIEVWDKGIIWDRAIGYHYLPLPQVAFS---NEVGSRKTAGVK 76 (85)
Q Consensus 10 ~~P~W~~~~~~~~~~f~fet~d~~~gL~vEVWnKgviwDdLLG~~~lPL~~v~~s---~e~g~g~W~~l~ 76 (85)
+.|.|++ +|.-+..+ ..-|.+-|-.+.. +++.-|.|+|..|... ++....-|+.||
T Consensus 54 ~~P~Wne-------~Fd~~V~~-Gr~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe 112 (126)
T 1yrk_A 54 MYPEWKS-------TFDAHIYE-GRVIQIVLMRAAE---EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ 112 (126)
T ss_dssp BCCCTTC-------EEEEECCT-TCEEEEEEEEETT---EEEEEEEEEHHHHHHHHHTTTTEEEEEEECB
T ss_pred CCcCccc-------eEEeeeeC-CEEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCCCceEEEEecc
Confidence 6799999 88887544 3347777777777 9999999999999864 345567898887
No 52
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=79.82 E-value=3.2 Score=30.82 Aligned_cols=45 Identities=18% Similarity=0.241 Sum_probs=32.0
Q ss_pred cCceeeeeccccceeeEeeecc--CCCC-ceEEEEeeCCe-----eeeceeeEEEeecCC
Q psy8569 9 GSNFRWSVFSVKTRFEVPSETN--DVNQ-GLLIEVWDKGI-----IWDRAIGYHYLPLPQ 60 (85)
Q Consensus 9 g~~P~W~~~~~~~~~~f~fet~--d~~~-gL~vEVWnKgv-----iwDdLLG~~~lPL~~ 60 (85)
.++|.|++ ++..... .... -|+|++-..-- --+...|+.||||-.
T Consensus 87 nk~P~w~E-------tIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 87 VKQPRWFE-------TVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp CSSCCCCE-------EEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred CCCCCceE-------eEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 57899999 8888873 2333 69999872211 134689999999963
No 53
>1xu1_R Tumor necrosis factor receptor superfamily member; TNFSF, cytokine, CRD, jelly-roll, cysteine-rich, H growth factor receptor complex; 1.90A {Homo sapiens} SCOP: g.24.1.2 PDB: 1xut_A
Probab=41.74 E-value=8.9 Score=22.44 Aligned_cols=11 Identities=18% Similarity=0.347 Sum_probs=9.9
Q ss_pred CeeeeceeeEE
Q psy8569 44 GIIWDRAIGYH 54 (85)
Q Consensus 44 gviwDdLLG~~ 54 (85)
|.|||.||..|
T Consensus 9 g~YwD~Ll~~C 19 (42)
T 1xu1_R 9 GKFYDHLLRDC 19 (42)
T ss_dssp TEEEETTTTEE
T ss_pred HHHHHHHHHhh
Confidence 68999999987
No 54
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=36.27 E-value=11 Score=25.03 Aligned_cols=22 Identities=23% Similarity=0.560 Sum_probs=16.5
Q ss_pred CceEEEEeeCCeee---eceeeEEE
Q psy8569 34 QGLLIEVWDKGIIW---DRAIGYHY 55 (85)
Q Consensus 34 ~gL~vEVWnKgviw---DdLLG~~~ 55 (85)
..+.|+||+++..- ||+|+.-+
T Consensus 21 ~~V~V~L~d~~~~~~d~Ddll~~~~ 45 (117)
T 3uaf_A 21 KKVHIDLWDAAAAAAESDDLMGRTW 45 (117)
T ss_dssp SSCEEEEEEHHHHHTTSCCEEEEEE
T ss_pred CCEEEEEEecccccCCchHhheeeE
Confidence 36899999966655 78998754
No 55
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=27.50 E-value=50 Score=23.14 Aligned_cols=57 Identities=14% Similarity=0.186 Sum_probs=38.5
Q ss_pred eeeeecCceeeeeccccceeeEeeeccCC------CCceEEEEeeCCeeee-ceeeEEEeecCCeeeecC
Q psy8569 4 ESNVIGSNFRWSVFSVKTRFEVPSETNDV------NQGLLIEVWDKGIIWD-RAIGYHYLPLPQVAFSNE 66 (85)
Q Consensus 4 ~~~v~g~~P~W~~~~~~~~~~f~fet~d~------~~gL~vEVWnKgviwD-dLLG~~~lPL~~v~~s~e 66 (85)
|-+++|.+|..+- ..+| ..+.++. ..+|++||...- --| +.+|.|.|||..+-.+++
T Consensus 58 Tpv~~G~~p~y~f---ts~Y--~V~~d~~fl~yL~~~~l~lELhqa~-g~~~~tla~~~I~l~~lLe~~~ 121 (156)
T 2yrb_A 58 TPVVRGLHPEYNF---TSQY--LVHVNDLFLQYIQKNTITLEVHQAY-STEYETIAACQLKFHEILEKSG 121 (156)
T ss_dssp CCCEESSSCCCCE---EEEE--EECCSHHHHHHHHHCCEEEEEEEEC-SSCEEEEEEEEECCSHHHHCCS
T ss_pred cccccCCCCCcce---EEEE--EEEeCHHHHHHHhcCCEEEEEEEee-CCCceEEEEEEEEhHHhhCcCC
Confidence 4467899988765 3333 3333331 237999999863 234 799999999999887544
Done!