BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8573
(123 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P70180|ANPRC_MOUSE Atrial natriuretic peptide receptor 3 OS=Mus musculus GN=Npr3 PE=1
SV=3
Length = 536
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 5 SVAVVVLCANPQTVREILLAAEELNMIDSGEYVFFNIELFSSMNAASLTPWYVHNDTDVR 64
S VV++CA+ T+R I+LA M SG+Y FFNIELF+S + + W D
Sbjct: 249 SERVVIMCASGDTIRRIMLAVHRHGMT-SGDYAFFNIELFNSSSYGDGS-W---RRGDKH 303
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSELLSAV 99
+ A++AY++L TVT + FS E+ S+V
Sbjct: 304 DSEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSV 338
>sp|P41740|ANPRC_RAT Atrial natriuretic peptide receptor 3 OS=Rattus norvegicus GN=Npr3
PE=2 SV=1
Length = 535
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 5 SVAVVVLCANPQTVREILLAAEELNMIDSGEYVFFNIELFSSMNAASLTPWYVHNDTDVR 64
S VV++CA+ T+R I+LA M SG+Y FFNIELF+S + + W D
Sbjct: 249 SERVVIMCASGDTIRRIMLAVHRHGMT-SGDYAFFNIELFNSSSYGDGS-W---KRGDKH 303
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSELLSAV 99
+ A++AY++L TVT + FS E+ S+V
Sbjct: 304 DFEAKQAYSSLQTVTLLRTAKPEFEKFSMEVKSSV 338
>sp|P17342|ANPRC_HUMAN Atrial natriuretic peptide receptor 3 OS=Homo sapiens GN=NPR3 PE=1
SV=2
Length = 541
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 5 SVAVVVLCANPQTVREILLAAEELNMIDSGEYVFFNIELFSSMNAASLTPWYVHNDTDVR 64
S VV++CA+ T+R I+L A M SG+Y FFNIELF+S + + W D
Sbjct: 254 SERVVIMCASSDTIRSIMLVAHRHGMT-SGDYAFFNIELFNSSSYGDGS-W---KRGDKH 308
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSELLSAV 99
+ A++AY++L TVT + FS E+ S+V
Sbjct: 309 DFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSV 343
>sp|P10730|ANPRC_BOVIN Atrial natriuretic peptide receptor 3 OS=Bos taurus GN=NPR3 PE=1
SV=2
Length = 537
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 5 SVAVVVLCANPQTVREILLAAEELNMIDSGEYVFFNIELFSSMNAASLTPWYVHNDTDVR 64
S VV++CA+ T+R I+LAA M SG+Y FFNIELF+S + W D
Sbjct: 250 SERVVIMCASSDTIRGIMLAAHRHGMT-SGDYAFFNIELFNSSFYGDGS-W---KRGDKH 304
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSELLSAV 99
+ A++AY++L T+T + FS E+ S+V
Sbjct: 305 DFEAKQAYSSLQTITLLRTVKPEFEKFSMEVKSSV 339
>sp|P16067|ANPRB_RAT Atrial natriuretic peptide receptor 2 OS=Rattus norvegicus GN=Npr2
PE=1 SV=1
Length = 1047
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 8 VVVLCANPQTVREILLAAEELNMIDSGEYVFFNIELF-SSMNA----ASLTPWYVHNDTD 62
+V +C + + EILL A+ N+ + G+YVFF +++F S+ A A+ PW N T
Sbjct: 223 IVYICGPLEMLHEILLQAQRENLTN-GDYVFFYLDVFGESLRAGPTRATGRPWQ-DNRTQ 280
Query: 63 VRNERARKAYTALLTVTARTPNNEAYRNFSSELL 96
+ + R+A+ +L +T R P N Y+ F + LL
Sbjct: 281 EQAQALREAFQTVLVITYREPPNPEYQEFQNRLL 314
>sp|Q6VVW5|ANPRB_MOUSE Atrial natriuretic peptide receptor 2 OS=Mus musculus GN=Npr2 PE=2
SV=2
Length = 1047
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 8 VVVLCANPQTVREILLAAEELNMIDSGEYVFFNIELF-SSMNA----ASLTPWYVHNDTD 62
+V +C + + EILL A+ N+ + G+YVFF +++F S+ A A+ PW N T
Sbjct: 223 IVYICGPLEMLHEILLQAQRENLTN-GDYVFFYLDVFGESLRAGPTRATGRPWQ-DNRTQ 280
Query: 63 VRNERARKAYTALLTVTARTPNNEAYRNFSSELL 96
+ + R+A+ +L +T R P N Y+ F + LL
Sbjct: 281 EQAQALREAFQTVLVITYREPPNPEYQEFQNRLL 314
>sp|P20594|ANPRB_HUMAN Atrial natriuretic peptide receptor 2 OS=Homo sapiens GN=NPR2 PE=1
SV=1
Length = 1047
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 8 VVVLCANPQTVREILLAAEELNMIDSGEYVFFNIELF-SSMNA----ASLTPWYVHNDTD 62
+V +C + + EILL A+ N+ + G+YVFF +++F S+ A A+ PW N T
Sbjct: 223 IVYICGPLEMLHEILLQAQRENLTN-GDYVFFYLDVFGESLRAGPTRATGRPWQ-DNRTR 280
Query: 63 VRNERARKAYTALLTVTARTPNNEAYRNFSSELL 96
+ + R+A+ +L +T R P N Y+ F + LL
Sbjct: 281 EQAQALREAFQTVLVITYREPPNPEYQEFQNRLL 314
>sp|P46197|ANPRB_BOVIN Atrial natriuretic peptide receptor 2 OS=Bos taurus GN=NPR2 PE=2
SV=1
Length = 1047
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 8 VVVLCANPQTVREILLAAEELNMIDSGEYVFFNIELFSSMNAASLT-----PWYVHNDTD 62
+V +C + + EILL A+ N+ + G+YVFF +++F A T PW N T
Sbjct: 223 IVYICGPLEMLHEILLQAQRENLTN-GDYVFFYLDVFGESLRAGPTRSMGRPWQ-DNRTR 280
Query: 63 VRNERARKAYTALLTVTARTPNNEAYRNFSSELL 96
+ + R+A+ +L +T R P N Y+ F + LL
Sbjct: 281 EQAQALREAFQTVLVITYREPPNPEYQEFQNRLL 314
>sp|P18910|ANPRA_RAT Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus GN=Npr1
PE=1 SV=1
Length = 1057
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 8 VVVLCANPQTVREILLAAEELNMIDSGE-YVFFNIELF--SSMNAASLTPWYVHNDTDVR 64
V+ +C++P R ++L A LN +GE YVFF++++F S +A L P D +
Sbjct: 237 VIYICSSPDAFRNLMLLA--LNAGLTGEDYVFFHLDVFGQSLKSAQGLVPQKPWERGDGQ 294
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSEL 95
+ AR+A+ A +T + P+N Y F +L
Sbjct: 295 DRSARQAFQAAKIITYKEPDNPEYLEFLKQL 325
>sp|P18293|ANPRA_MOUSE Atrial natriuretic peptide receptor 1 OS=Mus musculus GN=Npr1 PE=2
SV=2
Length = 1057
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 8 VVVLCANPQTVREILLAAEELNMIDSGE-YVFFNIELF-SSMNAAS----LTPWYVHNDT 61
V+ +C++P R ++L A + + +GE YVFF++++F S+ A PW
Sbjct: 237 VIYICSSPDAFRNLMLLALDAGL--TGEDYVFFHLDVFGQSLQGAQGPVPRKPW---ERD 291
Query: 62 DVRNERARKAYTALLTVTARTPNNEAYRNFSSEL 95
D ++ RAR+A+ A +T + P+N Y F +L
Sbjct: 292 DGQDRRARQAFQAAKIITYKEPDNPEYLEFLKQL 325
>sp|P51841|GUC2F_HUMAN Retinal guanylyl cyclase 2 OS=Homo sapiens GN=GUCY2F PE=2 SV=2
Length = 1108
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 6 VAVVVLCANP-----QTVREILLAAEELNMIDSGEYVFFNIELFSSMNAASLTPWYVHND 60
+ ++++C + +T +L A +L M D G YVF + TP+ V +
Sbjct: 242 IRIIIMCMHSALIGGETQMHLLECAHDLKMTD-GTYVFVPYDALLYSLPYKHTPYRVLRN 300
Query: 61 TDVRNERARKAYTALLTVTARTPNNEAYRNFSSELLSAVLP 101
N + R+AY A+LT+T + Y+ F+ +P
Sbjct: 301 ----NPKLREAYDAVLTITVESQEKTFYQAFTEAAARGEIP 337
>sp|P51842|GUC2F_RAT Retinal guanylyl cyclase 2 OS=Rattus norvegicus GN=Gucy2f PE=2 SV=1
Length = 1108
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 18/105 (17%)
Query: 6 VAVVVLCANP-----QTVREILLAAEELNMIDSGEYVF--FNIELFSSMNAASLTPWYVH 58
+ ++++C + +T L A +L M D G YVF +++ L+S P Y H
Sbjct: 242 IRIIIMCMHSALIGGETQTHFLELAHDLKMTD-GTYVFVPYDVLLYS-------LP-YKH 292
Query: 59 NDTDV--RNERARKAYTALLTVTARTPNNEAYRNFSSELLSAVLP 101
+ V N++ R+AY A+LT+T + Y F+ +P
Sbjct: 293 SPYQVLRNNQKLREAYDAVLTITVESHEKTFYEAFTEAAAGGEIP 337
>sp|O02740|GUC2F_BOVIN Retinal guanylyl cyclase 2 OS=Bos taurus GN=GUCY2F PE=2 SV=1
Length = 1103
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 6 VAVVVLCANP-----QTVREILLAAEELNMIDSGEYVFFNIELFSSMNAASLTPWYVHND 60
+ ++++C + +T +L A +L M D G YVF + TP+ V +
Sbjct: 242 IRIIIMCMHSTLIGGETQTHLLEWAHDLQMTD-GTYVFVPYDTLLYSLPYKHTPYKVLRN 300
Query: 61 TDVRNERARKAYTALLTVTARTPNNEAYRNFSSELLSAVLP 101
N + R+AY A+LT+T + Y+ F +P
Sbjct: 301 ----NPKLREAYDAVLTITVESQEKTFYQAFEEAAARGEIP 337
>sp|P55202|ANPRB_ANGJA Atrial natriuretic peptide receptor 2 OS=Anguilla japonica GN=npr2
PE=2 SV=1
Length = 1050
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 35 EYVFFNIELFS-SMNAASLTPWYVHNDTDVRNERARKAYTALLTVTARTPNNEAYRNFSS 93
+Y F +++F+ S+ PW +D+ K + ++ +TA+ P+N Y+ F
Sbjct: 258 DYAIFYLDMFAKSILDKDYKPW---ESSDINWTDPIKLFKSVFVITAKEPDNPEYKAFQR 314
Query: 94 EL 95
EL
Sbjct: 315 EL 316
>sp|A2AVR2|HEAT8_MOUSE HEAT repeat-containing protein 8 OS=Mus musculus GN=Heatr8 PE=4
SV=1
Length = 1279
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 14 NPQTVREILLAA-EELNMI------DSGEYVFFNIELFSSMNAASLTPWYVHNDTDVRNE 66
PQ VR++LLAA E L I DSGE ++L S + +S+ WY H +V E
Sbjct: 645 GPQQVRDLLLAALEGLKGISETQGKDSGEM----MQLASEVMLSSVLEWYRHRALEVIPE 700
Query: 67 RARKAYTAL 75
+ Y L
Sbjct: 701 IMQGIYMQL 709
>sp|P51840|GUC2E_RAT Guanylyl cyclase GC-E OS=Rattus norvegicus GN=Gucy2e PE=1 SV=1
Length = 1108
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 19 REILLAAEELNMIDSGEYVFFNIELFSSMNAASLTPWYVHNDTDVRNERARKAYTALLTV 78
R +L AAEEL + D G VF F +++ A L+P V + + R+A+ A+LT+
Sbjct: 260 RYLLEAAEELGLTD-GSLVFLP---FDTLHYA-LSPGPEALAAFVNSSKLRRAHDAVLTL 314
Query: 79 TARTP 83
T R P
Sbjct: 315 TRRCP 319
>sp|Q5BA96|ABNA_EMENI Probable arabinan endo-1,5-alpha-L-arabinosidase A OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=abnA PE=3 SV=2
Length = 322
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 23 LAAEELNMIDSGEYVFFNIELFSSMNAA---------SLTPWYVHNDTDVRNERARKAYT 73
L A ++ +++ YV +++ F S N+A L W H T +R++ + K Y
Sbjct: 88 LWAPDVQLVNGVYYVLYSVSTFGSQNSAIGLATSDTMDLNTWTDHGSTGIRSD-SSKPYN 146
Query: 74 ALLTVTARTPNNEAYRNFSS 93
A+ + + Y NF S
Sbjct: 147 AIDGNLFQDDSGTWYMNFGS 166
>sp|A9VIM8|SYD_BACWK Aspartate--tRNA ligase OS=Bacillus weihenstephanensis (strain
KBAB4) GN=aspS PE=3 SV=1
Length = 591
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 29/142 (20%)
Query: 7 AVVVLCANPQTVREILLAAE----------ELNMIDSGEYVFFN------IELFSS---- 46
+V + NP+T +E L AE E +++ GE + IE+ +S
Sbjct: 45 GIVQVVFNPETSKEALEVAETIRSEYVLHVEGTVVERGEGAINDNMATGRIEVQASKVNV 104
Query: 47 MNAASLTPWYVHNDTDVRNE-RARKAYTALL------TVTARTPNNEAYRNF--SSELLS 97
+NAA TP + +DTD + R + Y L T R + RNF + E L
Sbjct: 105 LNAAKTTPIIIADDTDASEDVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLE 164
Query: 98 AVLPILDHAKVASAKMPLLQNR 119
PIL + A+ L+ +R
Sbjct: 165 VETPILTKSTPEGARDYLVPSR 186
>sp|P0CC00|NDUA5_PONPY NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
OS=Pongo pygmaeus GN=NDUFA5 PE=3 SV=1
Length = 116
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSEL 95
+ER R YT +L V P N AYR ++ ++
Sbjct: 21 HERLRILYTKILDVLEEIPKNAAYRKYTEQI 51
>sp|P0CB99|NDUA5_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
OS=Pongo abelii GN=NDUFA5 PE=3 SV=1
Length = 116
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSEL 95
+ER R YT +L V P N AYR ++ ++
Sbjct: 21 HERLRILYTKILDVLEEIPKNAAYRKYTEQI 51
>sp|Q0MQA2|NDUA5_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
OS=Pan troglodytes GN=NDUFA5 PE=3 SV=3
Length = 116
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSEL 95
+ER R YT +L V P N AYR ++ ++
Sbjct: 21 HERLRILYTKILDVLEEIPKNAAYRKYTEQI 51
>sp|Q16718|NDUA5_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
OS=Homo sapiens GN=NDUFA5 PE=1 SV=3
Length = 116
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSEL 95
+ER R YT +L V P N AYR ++ ++
Sbjct: 21 HERLRILYTKILDVLEEIPKNAAYRKYTEQI 51
>sp|Q0MQA1|NDUA5_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
OS=Gorilla gorilla gorilla GN=NDUFA5 PE=3 SV=3
Length = 116
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSEL 95
+ER R YT +L V P N AYR ++ ++
Sbjct: 21 HERLRILYTKILDVLEEIPKNAAYRKYTEQI 51
>sp|P23935|NDUA5_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
OS=Bos taurus GN=NDUFA5 PE=1 SV=3
Length = 116
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSEL 95
+ER + YT +L V P N AYR ++ ++
Sbjct: 21 HERLKILYTKILDVLGHIPKNAAYRKYTEQI 51
>sp|Q4R5J1|NDUA5_MACFA NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
OS=Macaca fascicularis GN=NDUFA5 PE=3 SV=3
Length = 116
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 65 NERARKAYTALLTVTARTPNNEAYRNFSSEL 95
+ER YT +L V A P N AYR ++ ++
Sbjct: 21 HERLSILYTKILDVLAEIPKNAAYRKYTEQI 51
>sp|Q5SDA5|GUC2F_MOUSE Retinal guanylyl cyclase 2 OS=Mus musculus GN=Gucy2f PE=2 SV=1
Length = 1108
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 6 VAVVVLCANP-----QTVREILLAAEELNMIDSGEYVF--FNIELFSSMNAASLTPWYVH 58
+ ++++C + +T L A +L M D G YVF +++ L+S P Y H
Sbjct: 242 IRIIIMCMHSALIGGETQTHFLELAHDLKMTD-GTYVFVPYDVLLYS-------LP-YKH 292
Query: 59 NDTDV--RNERARKAYTALLTVTART 82
+ V N + R+AY A+LT+T +
Sbjct: 293 SPYQVLRNNPKLREAYDAVLTITVES 318
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 28/69 (40%)
Query: 40 NIELFSSMNAASLTPWYVHNDTDVRNERARKAYTALLTVTARTPNNEAYRNFSSELLSAV 99
N L+ S +A+S+ ND ER K T T NEA S L+ V
Sbjct: 41 NFTLYGSFHASSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEV 100
Query: 100 LPILDHAKV 108
L L +A V
Sbjct: 101 LKKLSNAGV 109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,101,300
Number of Sequences: 539616
Number of extensions: 1282579
Number of successful extensions: 3802
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3775
Number of HSP's gapped (non-prelim): 33
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)