Query psy8577
Match_columns 124
No_of_seqs 120 out of 1016
Neff 8.0
Searched_HMMs 13730
Date Fri Aug 16 22:23:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8577.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8577hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dp4a_ c.93.1.1 (A:) Hormone 99.9 2.8E-22 2E-26 150.8 13.2 117 3-119 290-406 (425)
2 d1jdpa_ c.93.1.1 (A:) Hormone 99.8 1.7E-18 1.3E-22 128.4 14.4 108 3-113 287-396 (401)
3 d1ewka_ c.93.1.1 (A:) Metabotr 99.7 4.9E-17 3.6E-21 125.8 10.9 90 28-120 372-475 (477)
4 d1usga_ c.93.1.1 (A:) Leucine- 99.2 2.7E-11 1.9E-15 88.3 9.9 85 4-103 259-344 (346)
5 d1qo0a_ c.93.1.1 (A:) Amide re 98.7 1.2E-07 8.4E-12 69.9 11.6 88 4-104 260-348 (373)
6 d3ckma1 c.93.1.1 (A:257-573) Y 98.3 3.7E-07 2.7E-11 64.7 5.5 60 28-104 258-317 (317)
7 d2bm3a1 b.2.2.2 (A:5-166) Scaf 35.9 9.3 0.00068 24.1 2.0 22 72-93 139-160 (162)
8 d3bn0a1 d.27.1.1 (A:2-102) Rib 30.7 28 0.002 20.1 3.5 33 86-118 14-50 (101)
9 d1uwya1 b.3.2.1 (A:297-403) Ca 30.0 12 0.0009 21.2 1.8 21 72-93 1-21 (107)
10 d1zv9a1 b.2.2.2 (A:3-173) Cell 25.2 20 0.0014 22.7 2.2 23 72-94 137-160 (171)
No 1
>d1dp4a_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.88 E-value=2.8e-22 Score=150.77 Aligned_cols=117 Identities=39% Similarity=0.624 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHhcCCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHcCCCCCChhHHHHHhhcCeeeeccceEEecCC
Q psy8577 3 FDFTAVKVKKVAKEGYNFTFGNESVSTFVTAFYDAVILYSIALNETIAMGGSQSDGSAITRRMWNRTYQGIAGDVHIDAN 82 (124)
Q Consensus 3 ~~~f~~~v~~~~~~~~~~~~~~~~~~~~~~~~yDAV~l~a~Al~~~~~~~~~~~~g~~l~~~~~~~~f~G~tG~v~fd~~ 82 (124)
|.+|.+++.+...++++|......++.++++.|||||++|+||++++.++..+.++..|.++|++++|+|++|+|+||++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDav~~~a~Al~~~~~~~~~~~~~~~l~~~l~~~~f~G~tG~v~fd~n 369 (425)
T d1dp4a_ 290 YLEFLKQLKLLADKKFNFTVEDGLKNIIPASFHDGLLLYVQAVTETLAQGGTVTDGENITQRMWNRSFQGVTGYLKIDRN 369 (425)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCCSGGGHHHHHHHHHHHHHHHHHHHHHHTTCCTTCHHHHHHTTTTEEEEETTEEEEECTT
T ss_pred HHHHHHHHHHHhhccCCCCccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhCCeEecCCeeEEECCC
Confidence 56788888888888888988888899999999999999999999998877777899999999999999999999999999
Q ss_pred CCcccCEEEEEecCCCCceEEEEEEeCCCCceeccCC
Q psy8577 83 GDRLADYSLLDMDPDTSEFRRNENEELKSGVRGSIDE 119 (124)
Q Consensus 83 Gdr~~~y~i~~~~~~~~~~~~vg~~~~~~g~~~~~~~ 119 (124)
|||.+.|.|++++..++++++||.|+..+.....+++
T Consensus 370 Gdr~~~y~i~~~~~~~~~~~~vg~~~~~~~~~~~~~~ 406 (425)
T d1dp4a_ 370 GDRDTDFSLWDMDPETGAFRVVLNYNGTSQELMAVSE 406 (425)
T ss_dssp SBBCCCEEEEEECTTTCCEEEEEEECTTTCCEEESTT
T ss_pred CCcccceEEEEEECCCCeEEEEEEEECCCCeEEecCC
Confidence 9999999999998778899999999986665555443
No 2
>d1jdpa_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.7e-18 Score=128.45 Aligned_cols=108 Identities=40% Similarity=0.674 Sum_probs=91.5
Q ss_pred hHHHHHHHHHHhc-CCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHcCCCCCChhHHHHHhhcCeeeeccceEEecC
Q psy8577 3 FDFTAVKVKKVAK-EGYNFTFGNESVSTFVTAFYDAVILYSIALNETIAMGGSQSDGSAITRRMWNRTYQGIAGDVHIDA 81 (124)
Q Consensus 3 ~~~f~~~v~~~~~-~~~~~~~~~~~~~~~~~~~yDAV~l~a~Al~~~~~~~~~~~~g~~l~~~~~~~~f~G~tG~v~fd~ 81 (124)
+.+|.+++++... .|.++ ...++.|++++|||||++|+||++++..+..+.++..|.++|++++|+|++|+|+||+
T Consensus 287 ~~~f~~~~~~~~~~~~~~~---~~~~~~~a~~~yDav~l~a~Al~~~~~~~~~~~~~~~l~~~l~~~~f~G~tG~v~fd~ 363 (401)
T d1jdpa_ 287 FEKFSMEVKSSVEKQGLNM---EDYVNMFVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDA 363 (401)
T ss_dssp HHHHHHHHHHHHHTTTCCC---CSSCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCHHHHHHHHSSEEEEETTEEEEECT
T ss_pred HHHHHHHHHHHHhhcCCCc---cccccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhCCeEEcCceEEEECC
Confidence 4678888876664 44332 2456788999999999999999999887777789999999999999999999999999
Q ss_pred CCCcccCEEEEEe-cCCCCceEEEEEEeCCCCc
Q psy8577 82 NGDRLADYSLLDM-DPDTSEFRRNENEELKSGV 113 (124)
Q Consensus 82 ~Gdr~~~y~i~~~-~~~~~~~~~vg~~~~~~g~ 113 (124)
+|||.++|.++.+ +.++|+|++||.|+..++.
T Consensus 364 ~Gdr~~~~~~~~~~~~~~g~~~~Vg~~~~~~~~ 396 (401)
T d1jdpa_ 364 NGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGR 396 (401)
T ss_dssp TSBBCCEEEEEEEEETTTTEEEEEEEEETTTTE
T ss_pred CCCccCcEEEEEEEECCCCEEEEEEEEECCCce
Confidence 9999889999887 4577899999999987763
No 3
>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.69 E-value=4.9e-17 Score=125.84 Aligned_cols=90 Identities=14% Similarity=0.244 Sum_probs=74.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHc----------CCCCCChhHHHHHhhcCeeeeccc-eEEecCCCCcccCEEEEEecC
Q psy8577 28 STFVTAFYDAVILYSIALNETIAM----------GGSQSDGSAITRRMWNRTYQGIAG-DVHIDANGDRLADYSLLDMDP 96 (124)
Q Consensus 28 ~~~~~~~yDAV~l~a~Al~~~~~~----------~~~~~~g~~l~~~~~~~~f~G~tG-~v~fd~~Gdr~~~y~i~~~~~ 96 (124)
..+++++|||||++|+||++++++ ...+.+|++|+++|++++|.|+|| .|.||++||+.+.|+|++++.
T Consensus 372 ~~~~~~~yDAV~a~A~AL~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~v~F~G~tG~~v~Fd~nGd~~~~y~I~n~q~ 451 (477)
T d1ewka_ 372 DSKMGFVINAIYAMAHGLQNMHHALCPGHVGLCDAMKPIDGRKLLDFLIKSSFVGVSGEEVWFDEKGDAPGRYDIMNLQY 451 (477)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHSTTCSSCCGGGSSCCHHHHHHHHHTCEEECTTSCEEECCTTSCCCCCEEEEEEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccCCCcCCHHHHHHHHhcCeeECCCCCEEEECCCCCccceEEEEEEEE
Confidence 458899999999999999999763 112468999999999999999999 699999999999999988843
Q ss_pred C-C--CceEEEEEEeCCCCceeccCCc
Q psy8577 97 D-T--SEFRRNENEELKSGVRGSIDED 120 (124)
Q Consensus 97 ~-~--~~~~~vg~~~~~~g~~~~~~~~ 120 (124)
. . ..|++||.|++. .++||++
T Consensus 452 ~~~~~~~~~~VG~w~~~---~l~i~~~ 475 (477)
T d1ewka_ 452 TEANRYDYVHVGTWHEG---VLNIDDY 475 (477)
T ss_dssp CSSSCEEEEEEEEEETT---EEEECTT
T ss_pred CCCCcEEEEEEEEEeCC---Ccccccc
Confidence 2 2 378999999852 4778774
No 4
>d1usga_ c.93.1.1 (A:) Leucine-binding protein {Escherichia coli [TaxId: 562]}
Probab=99.23 E-value=2.7e-11 Score=88.27 Aligned_cols=85 Identities=19% Similarity=0.248 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhcCCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHcCCCCCChhHHHHHhhcCeeeeccceEEecCCC
Q psy8577 4 DFTAVKVKKVAKEGYNFTFGNESVSTFVTAFYDAVILYSIALNETIAMGGSQSDGSAITRRMWNRTYQGIAGDVHIDANG 83 (124)
Q Consensus 4 ~~f~~~v~~~~~~~~~~~~~~~~~~~~~~~~yDAV~l~a~Al~~~~~~~~~~~~g~~l~~~~~~~~f~G~tG~v~fd~~G 83 (124)
.+|.+.+++..+. .++.++.+.|||+++++.||+++ ++ .++..|+++|+++.|+|++|+++||++|
T Consensus 259 ~~f~~~~~~~~~~---------~~~~~a~~~Yda~~~la~Al~~a---gs--~d~~~l~~al~~~~~~g~~G~v~fd~~G 324 (346)
T d1usga_ 259 QGIVDALKADKKD---------PSGPYVWITYAAVQSLATALERT---GS--DEPLALVKDLKANGANTVIGPLNWDEKG 324 (346)
T ss_dssp HHHHHHHHHTTCC---------CCCHHHHHHHHHHHHHHHHHHHH---CC--CCHHHHHHHHHHHCEEETTEEECBCTTS
T ss_pred hHHHHHHHHHhCC---------CCCchHHHHHHHHHHHHHHHHHH---CC--CCHHHHHHHHHhCCCccceEEEEECCCc
Confidence 4566666555443 35779999999999999999987 54 6888999999999999999999999999
Q ss_pred Cc-ccCEEEEEecCCCCceEE
Q psy8577 84 DR-LADYSLLDMDPDTSEFRR 103 (124)
Q Consensus 84 dr-~~~y~i~~~~~~~~~~~~ 103 (124)
|+ ...|.|++|+. +|++..
T Consensus 325 d~~~~~~~v~q~~~-dG~~~~ 344 (346)
T d1usga_ 325 DLKGFDFGVFQWHA-DGSSTK 344 (346)
T ss_dssp SBSSCCCEEEEECT-TSCEEE
T ss_pred CcCCCCEEEEEEEc-CCeEEe
Confidence 97 46899999943 555544
No 5
>d1qo0a_ c.93.1.1 (A:) Amide receptor/negative regulator of the amidase operon (AmiC) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=98.69 E-value=1.2e-07 Score=69.92 Aligned_cols=88 Identities=13% Similarity=0.220 Sum_probs=67.6
Q ss_pred HHHHHHHHHHhcCCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHcCCCCCChhHHHHHhhcCeeeeccceEEecCCC
Q psy8577 4 DFTAVKVKKVAKEGYNFTFGNESVSTFVTAFYDAVILYSIALNETIAMGGSQSDGSAITRRMWNRTYQGIAGDVHIDANG 83 (124)
Q Consensus 4 ~~f~~~v~~~~~~~~~~~~~~~~~~~~~~~~yDAV~l~a~Al~~~~~~~~~~~~g~~l~~~~~~~~f~G~tG~v~fd~~G 83 (124)
..|.++++++.+.. ..++.++...||++++++.|++++ ++ .+...|.++|++++|.|.+|.|+||..+
T Consensus 260 ~~f~~~~~~~~~~~-------~~~~~~~~~aY~a~~~~a~Ai~~a---g~--~d~~~i~~aL~~~~~~~~~G~i~f~~~~ 327 (373)
T d1qo0a_ 260 RAFVQACHGFFPEN-------ATITAWAEAAYWQTLLLGRAAQAA---GN--WRVEDVQRHLYDIDIDAPQGPVRVERQN 327 (373)
T ss_dssp HHHHHHHHHHSCTT-------CCCCHHHHHHHHHHHHHHHHHHHH---TS--CCHHHHHHHHSSCCEEETTEEEEECTTT
T ss_pred HHHHHHHHHHcCCC-------CCCChHHHHHHHHHHHHHHHHHHh---CC--CCHHHHHHHHhcCceeCCceeEEEcCCC
Confidence 45777776665421 134668999999999999999987 53 6899999999999999999999999765
Q ss_pred Cc-ccCEEEEEecCCCCceEEE
Q psy8577 84 DR-LADYSLLDMDPDTSEFRRN 104 (124)
Q Consensus 84 dr-~~~y~i~~~~~~~~~~~~v 104 (124)
.. .....|.+++ .+|.|..|
T Consensus 328 ~~~~~~~~i~q~~-~dg~~~vv 348 (373)
T d1qo0a_ 328 NHSRLSSRIAEID-ARGVFQVR 348 (373)
T ss_dssp SBEEBCCEEEEEC-TTSCEEEE
T ss_pred CcccCceEEEEEc-cCCcEEEE
Confidence 43 4566677773 24678777
No 6
>d3ckma1 c.93.1.1 (A:257-573) YraM C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=98.31 E-value=3.7e-07 Score=64.71 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCCCCChhHHHHHhhcCeeeeccceEEecCCCCcccCEEEEEecCCCCceEEE
Q psy8577 28 STFVTAFYDAVILYSIALNETIAMGGSQSDGSAITRRMWNRTYQGIAGDVHIDANGDRLADYSLLDMDPDTSEFRRN 104 (124)
Q Consensus 28 ~~~~~~~yDAV~l~a~Al~~~~~~~~~~~~g~~l~~~~~~~~f~G~tG~v~fd~~Gdr~~~y~i~~~~~~~~~~~~v 104 (124)
..+.++.|||+++++.+.+ + ..+....|.|+||.++||++|+....+.+.++ ++|++++|
T Consensus 258 ~~~~a~gyDa~~l~~~~~~-~--------------~~~~~~~~~G~tG~~~fd~~G~~~r~~~~~~~--~~G~~vp~ 317 (317)
T d3ckma1 258 MRLYAMGADAWLLINQFNE-L--------------RQVPGYRLSGLTGILSADTNCNVERDMTWYQY--QDGAIVPV 317 (317)
T ss_dssp HHHHHHHHHHHHHHHTHHH-H--------------HHSTTCCEEETTEEEEECTTCBEEEECEEEEE--ETTEEEEC
T ss_pred CchHHHHHHHHHHHHHHHH-H--------------hccCCCCeecCeEEEEECCCCCEeecceEEEE--ECCEEeEC
Confidence 4467789999888765433 2 12345579999999999999986556778888 78899875
No 7
>d2bm3a1 b.2.2.2 (A:5-166) Scaffolding dockerin binding protein A, SdbA {Clostridium thermocellum [TaxId: 1515]}
Probab=35.85 E-value=9.3 Score=24.15 Aligned_cols=22 Identities=23% Similarity=0.567 Sum_probs=18.8
Q ss_pred eccceEEecCCCCcccCEEEEE
Q psy8577 72 GIAGDVHIDANGDRLADYSLLD 93 (124)
Q Consensus 72 G~tG~v~fd~~Gdr~~~y~i~~ 93 (124)
+++|.+.||=+|+++..|.|.+
T Consensus 139 ai~GT~lfDW~g~~isgY~ViQ 160 (162)
T d2bm3a1 139 AISGTQLFDWDGEVITGYEVIQ 160 (162)
T ss_dssp CBTTEEEEETTSCEECSCEEEC
T ss_pred ccceeEEEecCCCeecceEEeC
Confidence 4789999999999988888874
No 8
>d3bn0a1 d.27.1.1 (A:2-102) Ribosomal protein S16 {Aquifex aeolicus [TaxId: 63363]}
Probab=30.69 E-value=28 Score=20.05 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=19.8
Q ss_pred ccCEEEEEecC---CCCce-EEEEEEeCCCCceeccC
Q psy8577 86 LADYSLLDMDP---DTSEF-RRNENEELKSGVRGSID 118 (124)
Q Consensus 86 ~~~y~i~~~~~---~~~~~-~~vg~~~~~~g~~~~~~ 118 (124)
.+.|.|...+. .+|+| ..||+||+.+...+.+|
T Consensus 14 ~p~yrIVv~d~r~~rdGk~iE~lG~ynP~~~~~i~l~ 50 (101)
T d3bn0a1 14 HPIYRIVVMDAKSPREGKYIDILGTYDPKRKVLINVY 50 (101)
T ss_dssp EEEEEEEEEECC------CSEEEEEEETTTTEEEEEC
T ss_pred CCeeEEEEeecCCCCCCcceeeeeEECCCCccccccc
Confidence 36788888743 34554 67999999654444555
No 9
>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.03 E-value=12 Score=21.18 Aligned_cols=21 Identities=33% Similarity=0.572 Sum_probs=13.4
Q ss_pred eccceEEecCCCCcccCEEEEE
Q psy8577 72 GIAGDVHIDANGDRLADYSLLD 93 (124)
Q Consensus 72 G~tG~v~fd~~Gdr~~~y~i~~ 93 (124)
|+.|.|. |++|+.++.-+|..
T Consensus 1 gI~G~V~-D~~g~pi~~A~V~i 21 (107)
T d1uwya1 1 GVKGQVF-DQNGNPLPNVIVEV 21 (107)
T ss_dssp SEEEEEE-CTTSCBCCSCEEEE
T ss_pred CcEEEEE-CCCCCCcCcEEEEE
Confidence 5667775 77777665555553
No 10
>d1zv9a1 b.2.2.2 (A:3-173) Cellulosomal scaffoldin adaptor protein B, ScaB {Acetivibrio cellulolyticus [TaxId: 35830]}
Probab=25.23 E-value=20 Score=22.74 Aligned_cols=23 Identities=43% Similarity=0.744 Sum_probs=18.8
Q ss_pred eccceEEecCCCCcc-cCEEEEEe
Q psy8577 72 GIAGDVHIDANGDRL-ADYSLLDM 94 (124)
Q Consensus 72 G~tG~v~fd~~Gdr~-~~y~i~~~ 94 (124)
+++|.+.||=+|+++ ..|.|.+=
T Consensus 137 ai~GT~lfDW~g~~i~sgY~ViQp 160 (171)
T d1zv9a1 137 AIDGTVLFDWNGDRIQSGYSVIQP 160 (171)
T ss_dssp CBTTEEEEETTSCBCCSSCEEECC
T ss_pred ccceeEEEecCCCeeecCceEecC
Confidence 478999999999987 68888753
Done!