BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy858
(72 letters)
Database: swissprot
455,621 sequences; 169,969,125 total letters
Searching..................................................done
>gi|308153644|sp|O95477.3|ABCA1_HUMAN RecName: Full=ATP-binding cassette sub-family A member 1; AltName:
Full=ATP-binding cassette transporter 1; Short=ABC-1;
Short=ATP-binding cassette 1; AltName: Full=Cholesterol
efflux regulatory protein
Length = 2261
Score = 97.8 bits (242), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/71 (61%), Positives = 55/71 (77%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL +Y + +G YSGGNKRKLSTAMALIG PP+VFLDEPT+G+DP +R LW +
Sbjct: 2032 LGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVV 2091
Query: 61 KTGQSIVLTSH 71
K G+S+VLTSH
Sbjct: 2092 KEGRSVVLTSH 2102
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 10 ESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLT 69
++ + SGG +RKLS A+A +G +V LDEPT+GVDP SR +W +L + ++ G++I+L+
Sbjct: 1029 KTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ-GRTIILS 1087
Query: 70 SH 71
+H
Sbjct: 1088 TH 1089
>gi|341940621|sp|P41233.4|ABCA1_MOUSE RecName: Full=ATP-binding cassette sub-family A member 1; AltName:
Full=ATP-binding cassette transporter 1; Short=ABC-1;
Short=ATP-binding cassette 1
Length = 2261
Score = 96.3 bits (238), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/71 (61%), Positives = 54/71 (76%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL +Y + + YSGGNKRKLSTAMALIG PP+VFLDEPT+G+DP +R LW I
Sbjct: 2032 LGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIV 2091
Query: 61 KTGQSIVLTSH 71
K G+S+VLTSH
Sbjct: 2092 KEGRSVVLTSH 2102
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 10 ESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLT 69
++ + SGG +RKLS A+A +G +V LDEPT+GVDP SR +W +L + ++ G++I+L+
Sbjct: 1029 KTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ-GRTIILS 1087
Query: 70 SH 71
+H
Sbjct: 1088 TH 1089
>gi|81916062|sp|Q91V24.1|ABCA7_MOUSE RecName: Full=ATP-binding cassette sub-family A member 7
Length = 2159
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 55/71 (77%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL Y R +G YSGGNKRKL+TA+AL+GDP +VFLDEPT+G+DP +R LW L +
Sbjct: 1927 LGLPSYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLSVV 1986
Query: 61 KTGQSIVLTSH 71
+ G+S+VLTSH
Sbjct: 1987 REGRSVVLTSH 1997
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GLT R ++ SGG +RKLS A+A +G +V +DEPT+GVDP SR +W +L + +
Sbjct: 924 VGLTLKRDTQTRHLSGGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYR 983
Query: 61 KTGQSIVLTSH 71
+ G++++L++H
Sbjct: 984 E-GRTLILSTH 993
>gi|6707663|sp|P78363.3|ABCA4_HUMAN RecName: Full=Retinal-specific ATP-binding cassette transporter;
AltName: Full=ATP-binding cassette sub-family A member 4;
AltName: Full=RIM ABC transporter; Short=RIM protein;
Short=RmP; AltName: Full=Stargardt disease protein
Length = 2273
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 55/71 (77%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GLT Y +G YSGGNKRKLSTA+ALIG PPLV LDEPT+G+DP +R LW V+ I
Sbjct: 2058 LGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSII 2117
Query: 61 KTGQSIVLTSH 71
+ G+++VLTSH
Sbjct: 2118 REGRAVVLTSH 2128
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 2 GLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQK 61
GL R+ E+ SGG +RKLS A+A +GD +V LDEPTSGVDP SR +W +L + +
Sbjct: 1050 GLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLK-YR 1108
Query: 62 TGQSIVLTSH 71
+G++I++++H
Sbjct: 1109 SGRTIIMSTH 1118
>gi|81912033|sp|Q7TNJ2.1|ABCA7_RAT RecName: Full=ATP-binding cassette sub-family A member 7
Length = 2170
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 55/71 (77%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL Y R +G YSGGNKRKL+TA+AL+GDP +VFLDEPT+G+DP +R LW L +
Sbjct: 1938 LGLPSYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNNLLSVV 1997
Query: 61 KTGQSIVLTSH 71
+ G+S+VLTSH
Sbjct: 1998 REGRSVVLTSH 2008
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL R ++ SGG +RKLS A+A +G +V +DEPT+GVDP SR +W +L + +
Sbjct: 925 VGLIPKRDTQTRHLSGGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYR 984
Query: 61 KTGQSIVLTSH 71
+ G++++L++H
Sbjct: 985 E-GRTLILSTH 994
>gi|206729923|sp|Q9BZC7.3|ABCA2_HUMAN RecName: Full=ATP-binding cassette sub-family A member 2; AltName:
Full=ATP-binding cassette transporter 2;
Short=ATP-binding cassette 2
Length = 2435
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 56/71 (78%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+ LT+Y + +G YSGGNKRKLSTA+ALIG P +FLDEPT+G+DP +R LW ++ +
Sbjct: 2173 LELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLI 2232
Query: 61 KTGQSIVLTSH 71
KTG+S+VLTSH
Sbjct: 2233 KTGRSVVLTSH 2243
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+ L+ RH SGG KRKLS A+A +G + LDEPT+GVDP +R +W ++ +
Sbjct: 1110 LELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY- 1168
Query: 61 KTGQSIVLTSH 71
K G++I+L++H
Sbjct: 1169 KPGRTILLSTH 1179
>gi|62512166|sp|P41234.4|ABCA2_MOUSE RecName: Full=ATP-binding cassette sub-family A member 2; AltName:
Full=ATP-binding cassette transporter 2;
Short=ATP-binding cassette 2
Length = 2434
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 56/71 (78%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+ LT+Y + +G YSGGNKRKLSTA+ALIG P +FLDEPT+G+DP +R LW ++ +
Sbjct: 2174 LELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLI 2233
Query: 61 KTGQSIVLTSH 71
KTG+S+VLTSH
Sbjct: 2234 KTGRSVVLTSH 2244
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+ L+ RH SGG KRKLS A+A +G + LDEPT+GVDP +R +W ++ +
Sbjct: 1110 LELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY- 1168
Query: 61 KTGQSIVLTSH 71
K G++I+L++H
Sbjct: 1169 KPGRTILLSTH 1179
>gi|161784300|sp|Q8IZY2.3|ABCA7_HUMAN RecName: Full=ATP-binding cassette sub-family A member 7; AltName:
Full=ABCA-SSN; AltName: Full=Autoantigen SS-N; AltName:
Full=Macrophage ABC transporter
Length = 2146
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL+ Y R +G YSGGNKRKL+TA+AL+GDP +VFLDEPT+G+DP +R LW L +
Sbjct: 1913 LGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVV 1972
Query: 61 KTGQSIVLTSH 71
+ G+S++LTSH
Sbjct: 1973 REGRSVMLTSH 1983
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL + ++ SGG +RKLS A+A +G +V LDEPT+GVDP SR +W +L + +
Sbjct: 927 VGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELLLKYR 986
Query: 61 KTGQSIVLTSH 71
+ G++++L++H
Sbjct: 987 E-GRTLILSTH 996
>gi|51315732|sp|Q9ESR9.1|ABCA2_RAT RecName: Full=ATP-binding cassette sub-family A member 2; AltName:
Full=ATP-binding cassette transporter 2;
Short=ATP-binding cassette 2
Length = 2434
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+ LT+ + +G YSGGNKRKLSTA+ALIG P +FLDEPT+G+DP +R LW ++ +
Sbjct: 2174 LELTKCADKPAGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLI 2233
Query: 61 KTGQSIVLTSH 71
KTG+S+VLTSH
Sbjct: 2234 KTGRSVVLTSH 2244
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+ L+ RH SGG KRKLS A+A +G + LDEPT+GVDP +R +W ++ +
Sbjct: 1110 LELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY- 1168
Query: 61 KTGQSIVLTSH 71
K G++I+L++H
Sbjct: 1169 KPGRTILLSTH 1179
>gi|60391189|sp|O35600.1|ABCA4_MOUSE RecName: Full=Retinal-specific ATP-binding cassette transporter;
AltName: Full=ATP-binding cassette sub-family A member 4;
AltName: Full=RIM ABC transporter; Short=RIM protein;
Short=RmP
Length = 2310
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL+ Y R +G YSGGNKRKLSTA+AL G PPL+ LDEPT+G+DP +R LW + I
Sbjct: 2057 LGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSII 2116
Query: 61 KTGQSIVLTSH 71
+ G+++VLTSH
Sbjct: 2117 REGRAVVLTSH 2127
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 2 GLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQK 61
GL R+ E+ SGG +RKLS A+A +GD +V LDEPTSGVDP SR +W +L + +
Sbjct: 1050 GLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKY-R 1108
Query: 62 TGQSIVLTSH 71
+G++I++++H
Sbjct: 1109 SGRTIIMSTH 1118
>gi|75327852|sp|Q84K47.1|AB2A_ARATH RecName: Full=ABC transporter A family member 2; Short=ABC
transporter ABCA.2; Short=AtABCA2; AltName: Full=ABC2
homolog 1
Length = 983
Score = 85.1 bits (209), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/69 (55%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKT 62
LTE +G YSGG KR+LS A++LIGDP LVFLDEPT+G+DPI+R +W ++ + +K
Sbjct: 654 LTEAGKIRAGSYSGGMKRRLSVAVSLIGDPKLVFLDEPTTGMDPITRRHVWDIIQETKK- 712
Query: 63 GQSIVLTSH 71
G++I+LT+H
Sbjct: 713 GRAIILTTH 721
>gi|75334036|sp|Q9FLT5.1|AB9A_ARATH RecName: Full=ABC transporter A family member 9; Short=ABC
transporter ABCA.9; Short=AtABCA9; AltName: Full=ABC2
homolog 11
Length = 950
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 11 SGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTS 70
+G YSGG KR+LS A+ALIGDP LVFLDEPT+G+DPI+R +W ++ Q K G++I+LT+
Sbjct: 664 AGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDII-QESKKGRAIILTT 722
Query: 71 H 71
H
Sbjct: 723 H 723
>gi|75333985|sp|Q9FKF2.1|AB11A_ARATH RecName: Full=ABC transporter A family member 11; Short=ABC
transporter ABCA.11; Short=AtABCA11; AltName:
Full=Putative ABC2 homolog 15
Length = 953
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 11 SGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTS 70
+G YSGG KR+LS A+ALIGDP LVFLDEPT+G+DPI+R +W ++ Q K G++I+LT+
Sbjct: 663 AGSYSGGMKRRLSVAVALIGDPKLVFLDEPTTGMDPITRRHVWDII-QESKKGRAIILTT 721
Query: 71 H 71
H
Sbjct: 722 H 722
>gi|338817896|sp|Q8R420.3|ABCA3_MOUSE RecName: Full=ATP-binding cassette sub-family A member 3
Length = 1704
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 51/58 (87%)
Query: 14 YSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
YSGGNKRKLST +ALIG+P ++FLDEP++G+DP++R LW +++ +++G++IV+TSH
Sbjct: 1515 YSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIVITSH 1572
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+ L + R S SGG KRKLS +ALI ++ LDEPTSG+D +SR +W +L Q Q
Sbjct: 652 LSLEDKRDLRSKFLSGGMKRKLSIGIALIAGSKVLMLDEPTSGMDAVSRRAIWDLLQQ-Q 710
Query: 61 KTGQSIVLTSH 71
K+ ++++LT+H
Sbjct: 711 KSDRTVLLTTH 721
>gi|85700402|sp|Q99758.2|ABCA3_HUMAN RecName: Full=ATP-binding cassette sub-family A member 3; AltName:
Full=ABC-C transporter; AltName: Full=ATP-binding
cassette transporter 3; Short=ATP-binding cassette 3
Length = 1704
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 51/58 (87%)
Query: 14 YSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
YSGGNKRKLST +ALIG+P ++FLDEP++G+DP++R LW +++ +++G++I++TSH
Sbjct: 1515 YSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIIITSH 1572
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL + + S SGG +RKLS +ALI ++ LDEPTSG+D ISR +W +L Q Q
Sbjct: 652 IGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLL-QRQ 710
Query: 61 KTGQSIVLTSH 71
K+ ++IVLT+H
Sbjct: 711 KSDRTIVLTTH 721
>gi|75327922|sp|Q84M24.2|AB1A_ARATH RecName: Full=ABC transporter A family member 1; Short=ABC
transporter ABCA.1; Short=AtABCA1; AltName: Full=ABC one
homolog protein 1; Short=AtAOH1
Length = 1882
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 57/71 (80%), Gaps = 2/71 (2%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ-K 61
L ++ H+ S SGGNKRKLS A+A+IGDPP+V LDEP++G+DP+++ +W V+S++ +
Sbjct: 1579 LLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTR 1638
Query: 62 TGQ-SIVLTSH 71
+G+ +++LT+H
Sbjct: 1639 SGKTAVILTTH 1649
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
SGG KRKLS +ALIG+ ++ LDEPTSG+DP S W L + K G+ I+LT+H
Sbjct: 685 SGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQ-LIKKIKKGRIILLTTH 740
>gi|269849713|sp|Q86UK0.3|ABCAC_HUMAN RecName: Full=ATP-binding cassette sub-family A member 12; AltName:
Full=ATP-binding cassette transporter 12;
Short=ATP-binding cassette 12
Length = 2595
Score = 77.8 bits (190), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 2 GLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQK 61
GL +RH+ G SGG KRKLS ++ALIG +V LDEP++GVDP SR +W V+S+ K
Sbjct: 1467 GLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISK-NK 1525
Query: 62 TGQSIVLTSH 71
T ++I+L++H
Sbjct: 1526 TARTIILSTH 1535
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKT 62
L ++ R + S G KRKLSTA+ALIG P ++ LDEP+SG+DP S+ LW ++S+ +
Sbjct: 2379 LMPFKDRATSMCSYGTKRKLSTALALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQN 2438
Query: 63 GQSIVLTSH 71
S++LTSH
Sbjct: 2439 KCSVILTSH 2447
>gi|259016168|sp|Q9FLT4.2|AB10A_ARATH RecName: Full=ABC transporter A family member 10; Short=ABC
transporter ABCA.10; Short=AtABCA10; AltName: Full=ABC2
homolog 14
Length = 909
Score = 75.5 bits (184), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 9 RESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVL 68
+ +G+YSGG KR+LS A++LIG+P +V++DEP++G+DP SR LW V+ Q K +I+L
Sbjct: 721 KPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKDLWTVI-QRAKQNTAIIL 779
Query: 69 TSH 71
T+H
Sbjct: 780 TTH 782
>gi|109818470|sp|Q9STT5.2|AB7A_ARATH RecName: Full=ABC transporter A family member 7; Short=ABC
transporter ABCA.7; Short=AtABCA7; AltName:
Full=Probable ABC2 homolog 6
Length = 935
Score = 75.5 bits (184), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 9 RESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVL 68
+ +G+YSGG KR+LS A++LIG+P +V++DEP++G+DP SR LW V+ + K +I+L
Sbjct: 747 KPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKR-AKQNTAIIL 805
Query: 69 TSH 71
T+H
Sbjct: 806 TTH 808
>gi|81910100|sp|Q5SSE9.1|ABCAD_MOUSE RecName: Full=ATP-binding cassette sub-family A member 13
Length = 5034
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 14 YSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
YSGG +RKLSTA+AL+G P ++ LDEP+SG+DP S+ LW ++Q + G + VLTSH
Sbjct: 4832 YSGGTRRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTITQEVRDGCAAVLTSH 4889
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKT 62
LT+++H+ +G SGG KRKLS +A +G V LDEP+SGVDP SR LW +L + ++
Sbjct: 3933 LTQHQHKPAGVLSGGMKRKLSIGIAFMGMSKTVVLDEPSSGVDPCSRRSLWDILLKYRE- 3991
Query: 63 GQSIVLTSH 71
G++I+ T+H
Sbjct: 3992 GRTIIFTTH 4000
>gi|374095510|sp|Q1PEH6.3|AB3A_ARATH RecName: Full=ABC transporter A family member 3; Short=ABC
transporter ABCA.3; Short=AtABCA3; AltName: Full=ABC2
homolog 2
Length = 932
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 9 RESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVL 68
+ +G+YSGG KR+LS A++LIG+P +V++DEP++G+DP SR LW V+ K +I+L
Sbjct: 744 KPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKN-AKRHTAIIL 802
Query: 69 TSH 71
T+H
Sbjct: 803 TTH 805
>gi|75334037|sp|Q9FLT8.1|AB12A_ARATH RecName: Full=ABC transporter A family member 12; Short=ABC
transporter ABCA.12; Short=AtABCA12; AltName:
Full=Putative ABC2 homolog 16
Length = 917
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 9 RESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVL 68
+ +G YSGG KR+LS A++LIG+P +V+LDEP++G+DP SR LW V+ + K +I+L
Sbjct: 729 KPAGNYSGGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKNLWNVIKR-AKQNTAIIL 787
Query: 69 TSH 71
T+H
Sbjct: 788 TTH 790
>gi|257050993|sp|Q9STT6.2|AB6A_ARATH RecName: Full=ABC transporter A family member 6; Short=ABC
transporter ABCA.6; Short=AtABCA6; AltName:
Full=Putative ABC2 homolog 5
Length = 926
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 11 SGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTS 70
+G+YSGG KR+LS A++LIG P +V++DEP++G+DP SR LW V+ + +K +I+LT+
Sbjct: 746 AGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRINLWTVIKRAKKHA-AIILTT 804
Query: 71 H 71
H
Sbjct: 805 H 805
>gi|327478592|sp|Q86UQ4.3|ABCAD_HUMAN RecName: Full=ATP-binding cassette sub-family A member 13
Length = 5058
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKT 62
LT+++H+++ SGG KRKLS +A +G V LDEPTSGVDP SRH LW +L + ++
Sbjct: 3965 LTQHQHKQTRALSGGLKRKLSLGIAFMGMSRTVVLDEPTSGVDPCSRHSLWDILLKYRE- 4023
Query: 63 GQSIVLTSH 71
G++I+ T+H
Sbjct: 4024 GRTIIFTTH 4032
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 14 YSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
YSGG KRKLSTA+AL+G P ++ LDEP+SG+DP S+ LW + + + G + VLTSH
Sbjct: 4857 YSGGTKRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTIMKEVREGCAAVLTSH 4914
>gi|332278217|sp|Q8LPK0.3|AB8A_ARATH RecName: Full=ABC transporter A family member 8; Short=ABC
transporter ABCA.8; Short=AtABCA8; AltName: Full=ABC2
homolog 7
Length = 901
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 9 RESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVL 68
++ +YSGG KR+LS A++LIG P +V++DEP++G+DP SR LW V+ + ++ G +I+L
Sbjct: 720 KQVSKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRKSLWDVVKRAKRKG-AIIL 778
Query: 69 TSH 71
T+H
Sbjct: 779 TTH 781
>gi|257050992|sp|Q9STT7.2|AB5A_ARATH RecName: Full=ABC transporter A family member 5; Short=ABC
transporter ABCA.5; Short=AtABCA5; AltName:
Full=Putative ABC2 homolog 4
Length = 936
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 9 RESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVL 68
+ +G+YSGG KR+LS A++LIG P +V++DEP++G+DP SR LW + + K +I+L
Sbjct: 748 KPAGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRRSLWTAIKR-AKNHTAIIL 806
Query: 69 TSH 71
T+H
Sbjct: 807 TTH 809
>gi|74997367|sp|Q55BC0.1|ABCA8_DICDI RecName: Full=ABC transporter A family member 8; AltName: Full=ABC
transporter ABCA.8
Length = 837
Score = 72.0 bits (175), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKT 62
LT+ + + +SGG KR+LS A+ IGDP ++F+DEPT+G+DP S+ R++ ++ +I+K
Sbjct: 641 LTKVANDQCSTFSGGMKRRLSVAIGCIGDPKIIFMDEPTTGLDPRSKRRIYTLVKEIKKD 700
Query: 63 GQSIVLTSH 71
+ I+LTSH
Sbjct: 701 -KVIILTSH 708
>gi|75018032|sp|Q8T6J1.1|ABCA6_DICDI RecName: Full=ABC transporter A family member 6; AltName: Full=ABC
transporter ABCA.6
Length = 1631
Score = 72.0 bits (175), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKT 62
LT + G YSGGNKRK+S +MA++G+P + FLDE + G D + R +LW V+S++ K
Sbjct: 1435 LTRIANSGCGGYSGGNKRKVSLSMAMLGNPSVCFLDEISCGCDAVVRRQLWDVISELGKD 1494
Query: 63 GQSIVLTSH 71
+SI+LTSH
Sbjct: 1495 -KSIILTSH 1502
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
+GL E + +G SGG KRKL +A IG ++FLDE TSG+DP+SR ++W L + +
Sbjct: 613 VGLAEKMNAPAGSLSGGQKRKLCLGIAFIGRSKIIFLDEVTSGMDPVSRRQVWDFLLKYK 672
Query: 61 KTGQSIVLTSH 71
K G++I+LT+H
Sbjct: 673 K-GKTIILTTH 682
>gi|257050991|sp|Q9STT8.2|AB4A_ARATH RecName: Full=ABC transporter A family member 4; Short=ABC
transporter ABCA.4; Short=AtABCA4; AltName:
Full=Putative ABC2 homolog 3
Length = 937
Score = 72.0 bits (175), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 9 RESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVL 68
+ +G+YSGG KR+LS A++LIG P +V++DEP++G+DP SR LW + +K +I+L
Sbjct: 749 KPAGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRRSLWTAIKGAKKH-TAIIL 807
Query: 69 TSH 71
T+H
Sbjct: 808 TTH 810
>gi|74997293|sp|Q552P3.1|ABCAB_DICDI RecName: Full=ABC transporter A family member 11; AltName: Full=ABC
transporter ABCA.11
Length = 834
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKT 62
+ +++++S SGG KRKLS A LIGDP +V LDEP++ +DPISR+ L +++ ++ K
Sbjct: 584 IQSFKNKKSSDLSGGTKRKLSVACCLIGDPQVVLLDEPSTSLDPISRNELHSLIDEL-KV 642
Query: 63 GQSIVLTSH 71
+SI++T+H
Sbjct: 643 NKSIIMTTH 651
>gi|338817845|sp|Q8K449.2|ABCA9_MOUSE RecName: Full=ATP-binding cassette sub-family A member 9
Length = 1623
Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
SGG KRKL+ +A++GDP ++ LDEPT+G+DP+SRHR+W +L + ++ G+ IV ++
Sbjct: 619 SGGQKRKLTLGIAILGDPQVLLLDEPTAGLDPLSRHRIWNLLKE-RRAGRVIVFSTQ 674
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLW-AVLSQIQKTGQSIVLTSH 71
S G KRKL ++++G+PP+V LDEP++G+DP + ++W A+ + T + +LT+H
Sbjct: 1421 SEGVKRKLCFVLSILGNPPVVLLDEPSTGMDPEGQQQMWQAIRATFTNTERGALLTTH 1478
>gi|75018033|sp|Q8T6J2.1|ABCA5_DICDI RecName: Full=ABC transporter A family member 5; AltName: Full=ABC
transporter ABCA.5
Length = 1662
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
M L + + +G YSGGNKRK+S ++A++G+P +V +DE +SG DPI R+R V+S++
Sbjct: 1446 MDLGKIANSNTGGYSGGNKRKVSLSIAMLGNPSVVLIDEASSGCDPIIRYRQCQVISELG 1505
Query: 61 KTGQSIVLTSH 71
K + I+LTSH
Sbjct: 1506 KN-KVIILTSH 1515
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKT 62
L E H +G SGG KRKL +A IG ++FLDE +SG+DP SR ++W L K
Sbjct: 630 LGEKLHTPAGSLSGGQKRKLCLGIAFIGRSTIIFLDEVSSGMDPSSRRKVWDFLLS-HKK 688
Query: 63 GQSIVLTSH 71
G++I+LT+H
Sbjct: 689 GKTIILTTH 697
>gi|75018036|sp|Q8T6J5.1|ABCA2_DICDI RecName: Full=ABC transporter A family member 2; AltName: Full=ABC
transporter ABCA.2
Length = 1621
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 1 MGLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQ 60
M L + +G YSGGNKRK S ++A++G+P +V LDEP++G D + R +W V+S++
Sbjct: 1417 MDLGAIANSNTGGYSGGNKRKTSLSIAMLGNPSIVSLDEPSTGCDAVVRKYIWNVVSELA 1476
Query: 61 KTGQSIVLTSH 71
K + I+LTSH
Sbjct: 1477 KD-KVIILTSH 1486
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 3 LTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKT 62
L E H ++G SGG KRKL +A IG ++FLDE +SG+DP+SR +W L + +K
Sbjct: 608 LGEKIHSQAGSLSGGQKRKLCLGIAFIGRSDVIFLDEVSSGMDPLSRRVVWDFLLKYKK- 666
Query: 63 GQSIVLTSH 71
G++I+LT+H
Sbjct: 667 GRTIILTTH 675
>gi|75017977|sp|Q8T5Z7.1|ABCA1_DICDI RecName: Full=ABC transporter A family member 1; AltName: Full=ABC
transporter ABCA.1
Length = 877
Score = 68.9 bits (167), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 14 YSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
YSGG KR+LS A+A IGDP ++F+DEPT+GVDP S+ L ++ I K + I+LTSH
Sbjct: 690 YSGGMKRRLSVAIACIGDPKIIFMDEPTTGVDPSSKRHLIDLVKSI-KNDKVIILTSH 746
>gi|54042326|sp|P37624.3|YHIH_ECOLI RecName: Full=Uncharacterized ABC transporter ATP-binding protein
YhiH
Length = 911
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 2 GLTEYRHRESGRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQK 61
GL +R R +G+ SGG K+KL ALI DP L+ LDEPT+GVDP+SR + W ++ I++
Sbjct: 136 GLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQ 195
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 17 GNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQ-SIVLTSH 71
G +++LS A+A+I P ++ LDEPTSGVDP++R W ++ + + + +I +++H
Sbjct: 411 GIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTH 466
>gi|296439455|sp|Q8WWZ4.3|ABCAA_HUMAN RecName: Full=ATP-binding cassette sub-family A member 10
Length = 1543
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 13 RYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQ 58
+ SGG KRKL+ +A++GDP ++ LDEPT+G+DP SRHR+W++L +
Sbjct: 527 KLSGGQKRKLTLGIAILGDPQVLLLDEPTAGLDPFSRHRVWSLLKE 572
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVL-SQIQKTGQSIVLTSH 71
S G KRKL ++++G+P +V LDEP +G+DP + ++W +L + ++ + +LT+H
Sbjct: 1341 SEGIKRKLCFVLSILGNPSVVLLDEPFTGMDPEGQQQMWQILQATVKNKERGTLLTTH 1398
>gi|6093521|sp|P72335.1|NODI_RHIS3 RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
Query: 3 LTEYRHRES------GRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVL 56
L E+ ES G SGG KR+L+ A ALI DP L+ +DEPT+G+DP +RH +W L
Sbjct: 120 LLEFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERL 179
Query: 57 SQIQKTGQSIVLTSH 71
+ G++I+LT+H
Sbjct: 180 RFLLARGKTIILTTH 194
>gi|123760166|sp|Q46YX6.1|NODI_RALEJ RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 43/57 (75%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
SGG +R+L+ A ALI DP L+ +DEPT+G+DP +RH +W L + +G++I+LT+H
Sbjct: 159 SGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLMASGKTILLTTH 215
>gi|81814905|sp|O07016.1|YVFR_BACSU RecName: Full=Uncharacterized ABC transporter ATP-binding protein
YvfR
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 13 RYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
+ SGG KR+LS A+AL G+P L+ LDEPT G+D SRHR W + + G++I+ ++H
Sbjct: 130 KLSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTIHGLSDQGKTIIFSTH 188
>gi|124015174|sp|Q63TX3.2|NODI_BURPS RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 12 GRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
G SGG KR+L+ A AL+ DP ++ LDEPT+G+DP +RH +W L + G++I+LT+H
Sbjct: 135 GELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTH 194
>gi|124015172|sp|Q62K72.2|NODI_BURMA RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
gi|124015173|sp|Q3JSQ0.2|NODI_BURP1 RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 12 GRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
G SGG KR+L+ A AL+ DP ++ LDEPT+G+DP +RH +W L + G++I+LT+H
Sbjct: 135 GELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTH 194
>gi|1709322|sp|P50332.1|NODI_RHIGA RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 347
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
SGG KR+L+ A AL+ DP L+ LDEPT+G+DP +RH++W L + G++I+LT+H
Sbjct: 181 SGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIRGKTILLTTH 237
>gi|124015178|sp|Q1M7W6.2|NODI_RHIL3 RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
SGG KR+L+ A ALI DP L+ LDEPT+G+DP +RH +W L + G++I+LT+H
Sbjct: 145 SGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTH 201
>gi|123259958|sp|Q1LKJ2.1|NODI_RALME RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 303
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
SGG +R+L+ A ALI DP L+ +DEPT+G+DP +RH +W L + G++I+LT+H
Sbjct: 137 SGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLLSAGKTILLTTH 193
>gi|122978951|sp|Q1BWI2.1|NODI_BURCA RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 304
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 12 GRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
G SGG KR+L+ A AL+ DP ++ LDEPT+G+DP +RH +W L + G++I++T+H
Sbjct: 135 GELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTH 194
>gi|2492542|sp|P55476.1|NODI_RHISN RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 343
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 12 GRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
+ SGG +R+L+ A ALI DP L+ LDEPT+G+DP +RH +W L + G++I+LT+H
Sbjct: 174 AQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRSLLALGKTILLTTH 233
>gi|124015177|sp|Q8KLG1.3|NODI_RHIEC RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 316
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
SGG KR+L+ A ALI DP L+ +DEPT+G+DP +RH +W L + G++I+LT+H
Sbjct: 150 SGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRSLLTRGKTIILTTH 206
>gi|124015175|sp|Q39GT7.2|NODI_BURS3 RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 304
Score = 65.9 bits (159), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 12 GRYSGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
G SGG KR+L+ A AL+ DP ++ LDEPT+G+DP +RH +W L + G++I++T+H
Sbjct: 135 GELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTH 194
>gi|128473|sp|P08720.1|NODI_RHILV RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
SGG KR+L+ A ALI DP L+ LDEPT+G+DP +RH +W L + G++I+LT+H
Sbjct: 145 SGGMKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTH 201
>gi|29839546|sp|Q8GNH6.1|NODI2_RHIME RecName: Full=Nod factor export ATP-binding protein I; AltName:
Full=Nodulation ATP-binding protein I
Length = 335
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%)
Query: 15 SGGNKRKLSTAMALIGDPPLVFLDEPTSGVDPISRHRLWAVLSQIQKTGQSIVLTSH 71
SGG KR+L+ A ALI DP L+ LDEPT+G+DP +RH +W L + G++I+LT+H
Sbjct: 169 SGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTH 225
Database: swissprot
Posted date: Jul 29, 2013 6:00 PM
Number of letters in database: 169,969,125
Number of sequences in database: 455,621
Lambda K H
0.317 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,852,631
Number of Sequences: 455621
Number of extensions: 851509
Number of successful extensions: 5556
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3134
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 1840
Number of HSP's gapped (non-prelim): 3832
length of query: 72
length of database: 169,969,125
effective HSP length: 44
effective length of query: 28
effective length of database: 149,921,801
effective search space: 4197810428
effective search space used: 4197810428
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)