Your job contains 1 sequence.
>psy8580
MKSTRNKGELDLGDLPPIEDLQISVPEDQCLPVGKILNIVDTLVLIKTLKNTPTLDLDSV
LFLDKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQTEHTSYVPL
PDLIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQLRTRNNRNTSSTDGTDPPDVP
PEPKTRRPTPFEQRMNLRNLLMTASYERRNRINDTATTSRPANKSFTPGSIIRAPTLPDI
PPLPLPMSQPSAPPPRFTPPQHQHQQETPLLFCR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8580
(274 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032701 - symbol:CG10341 species:7227 "Drosophila ... 483 4.8e-46 1
ZFIN|ZDB-GENE-030131-4546 - symbol:naf1 "nuclear assembly... 388 5.7e-36 1
MGI|MGI:2682306 - symbol:Naf1 "nuclear assembly factor 1 ... 359 5.7e-36 2
RGD|1306802 - symbol:Naf1 "nuclear assembly factor 1 ribo... 359 3.1e-35 2
UNIPROTKB|Q52KK4 - symbol:Naf1 "H/ACA ribonucleoprotein c... 359 3.1e-35 2
UNIPROTKB|F1LMR4 - symbol:Naf1 "H/ACA ribonucleoprotein c... 359 6.7e-33 1
UNIPROTKB|F1NV75 - symbol:NAF1 "Uncharacterized protein" ... 352 3.7e-32 1
UNIPROTKB|F1NWY4 - symbol:NAF1 "Uncharacterized protein" ... 352 3.7e-32 1
UNIPROTKB|Q96HR8 - symbol:NAF1 "H/ACA ribonucleoprotein c... 348 9.8e-32 1
UNIPROTKB|Q1RMQ2 - symbol:LOC514182 "Uncharacterized prot... 346 1.6e-31 1
UNIPROTKB|F1RTX5 - symbol:NAF1 "Uncharacterized protein" ... 344 2.6e-31 1
UNIPROTKB|J9P780 - symbol:NAF1 "Uncharacterized protein" ... 281 1.2e-24 1
TAIR|locus:2020713 - symbol:NAF1 "nuclear assembly factor... 210 6.4e-16 1
WB|WBGene00009132 - symbol:F25H8.2 species:6239 "Caenorha... 202 1.0e-15 1
UNIPROTKB|G4N8S8 - symbol:MGG_10116 "Uncharacterized prot... 192 3.9e-14 1
ASPGD|ASPL0000057096 - symbol:AN0728 species:162425 "Emer... 167 1.4e-10 1
DICTYBASE|DDB_G0276085 - symbol:DDB_G0276085 "H/ACA ribon... 129 1.9e-10 2
POMBASE|SPBC30D10.15 - symbol:SPBC30D10.15 "snoRNP assemb... 159 1.7e-09 1
CGD|CAL0005870 - symbol:orf19.494 species:5476 "Candida a... 152 1.9e-08 1
SGD|S000005068 - symbol:NAF1 "RNA-binding protein require... 141 3.2e-07 1
>FB|FBgn0032701 [details] [associations]
symbol:CG10341 species:7227 "Drosophila melanogaster"
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0031120 "snRNA pseudouridine
synthesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR007504 Pfam:PF04410 GO:GO:0005634 EMBL:AE014134
GO:GO:0022008 GO:GO:0030515 GO:GO:0042254 GO:GO:0003723
GO:GO:0006364 GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447
KO:K14763 GO:GO:0005732 EMBL:AY051589 RefSeq:NP_609898.1
UniGene:Dm.23213 ProteinModelPortal:Q9VJ62 SMR:Q9VJ62 IntAct:Q9VJ62
MINT:MINT-769614 STRING:Q9VJ62 PaxDb:Q9VJ62
EnsemblMetazoa:FBtr0081097 GeneID:35125 KEGG:dme:Dmel_CG10341
UCSC:CG10341-RA FlyBase:FBgn0032701 eggNOG:NOG275663
GeneTree:ENSGT00390000004697 InParanoid:Q9VJ62 OMA:TVPEDEC
OrthoDB:EOG49W0XB PhylomeDB:Q9VJ62 GenomeRNAi:35125 NextBio:791988
Bgee:Q9VJ62 Uniprot:Q9VJ62
Length = 564
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 102/231 (44%), Positives = 137/231 (59%)
Query: 7 KGELDLGDLPPIEDLQISVPEDQCLPVGKILNIVDTLVLIKTLKNTPTLDLDSVLFLDKG 66
+GE+ L DLPPI L+I+VPED+C+ +GK+ +IVD LVL+ L N+ DLD+VLFL+KG
Sbjct: 263 RGEMLLDDLPPIHQLEITVPEDECVELGKVQSIVDQLVLVSVLPNSMLFDLDTVLFLEKG 322
Query: 67 QRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQTEHTSYVPLPDLIKV 126
++ LG++FDV+G VS P+YCVRFNS++ I+D IKI VYCAP+TEHT +V L L++V
Sbjct: 323 RKVLGEVFDVLGQVSDPLYCVRFNSNKQILDRGIKIGDVVYCAPKTEHTQFVILSKLMQV 382
Query: 127 KGSDASWERDQEPPPEVVEFSDDEEERRVKRNQLXXXXXXXXXXXDGTDPPDVPPEPKTR 186
+GSDASWE D EPP V+ SDDEEER + Q D D T+
Sbjct: 383 RGSDASWEHDVEPPARYVDHSDDEEEREARAEQRKRRQRDRTNSTDSVDTVTSVATTATK 442
Query: 187 R----PTPFEQ-RMNLRNLLMTASYERRNRINDTATTSRPAN--KSFTPGS 230
P P ++ R R + N+ N N S+ PGS
Sbjct: 443 ASSVAPPPRQRGRRGQRESFRQSQRPSINQHNQNQPQDEQYNFHPSYNPGS 493
>ZFIN|ZDB-GENE-030131-4546 [details] [associations]
symbol:naf1 "nuclear assembly factor 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR007504 Pfam:PF04410 ZFIN:ZDB-GENE-030131-4546
GO:GO:0030515 GO:GO:0042254 GO:GO:0031120 InterPro:IPR009000
SUPFAM:SSF50447 KO:K14763 GeneTree:ENSGT00390000004697 CTD:92345
EMBL:BX248111 IPI:IPI00493624 RefSeq:XP_696744.2 UniGene:Dr.78470
Ensembl:ENSDART00000148105 GeneID:568328 KEGG:dre:568328
OMA:KATINEI ArrayExpress:F1QXL6 Bgee:F1QXL6 Uniprot:F1QXL6
Length = 503
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 84/197 (42%), Positives = 120/197 (60%)
Query: 5 RNKGELDLGDLPPIEDLQISVPED-QCLPVGKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
+ + EL + DLP +E+L IS+PED + P+G I +IVD LV++++ KN P L+ +SVLF
Sbjct: 230 KTQDELLIDDLPAVENLIISLPEDTEMEPIGTISSIVDQLVIVESYKNLPPLNEESVLF- 288
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQT-EHTSYVPLPD 122
K + S+GK+F++ GPV P Y +RFNSH I ++K+ VY AP+ + T Y+
Sbjct: 289 SKNRNSVGKVFEIFGPVCQPFYVLRFNSHDDIEQKDLKVRDPVYFAPKLKDFTDYIFTDK 348
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQLXXXXXXXXXXXDGTDPPDVPPE 182
L +KGSDASW+ DQEPPPE ++FSDDE+ER K+ +L D D D
Sbjct: 349 LKTLKGSDASWKNDQEPPPEALDFSDDEQERLAKQ-KLKEQKRRQQNDSDSEDESDAQKM 407
Query: 183 P-KTRRPTPFEQRMNLR 198
P K R P + R + R
Sbjct: 408 PQKAARRKPRQNRNHPR 424
>MGI|MGI:2682306 [details] [associations]
symbol:Naf1 "nuclear assembly factor 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0031120
"snRNA pseudouridine synthesis" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR007504 Pfam:PF04410
MGI:MGI:2682306 GO:GO:0005634 GO:GO:0005737 GO:GO:0030515
GO:GO:0042254 GO:GO:0003723 GO:GO:0006364 GO:GO:0031120
InterPro:IPR009000 SUPFAM:SSF50447 KO:K14763 GO:GO:0005732
eggNOG:NOG275663 CTD:92345 HOVERGEN:HBG108169 EMBL:AC116731
EMBL:AK144735 EMBL:BC027148 IPI:IPI00987944 RefSeq:NP_001157036.1
UniGene:Mm.334561 ProteinModelPortal:Q3UMQ8 SMR:Q3UMQ8
STRING:Q3UMQ8 PhosphoSite:Q3UMQ8 PRIDE:Q3UMQ8 GeneID:234344
KEGG:mmu:234344 UCSC:uc009lvu.2 HOGENOM:HOG000214085
InParanoid:Q3UMQ8 OrthoDB:EOG42BXB6 NextBio:382097 CleanEx:MM_NAF1
Genevestigator:Q3UMQ8 Uniprot:Q3UMQ8
Length = 489
Score = 359 (131.4 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 70/157 (44%), Positives = 107/157 (68%)
Query: 5 RNKGELDLGDLPPIEDLQISVPEDQCL-PVGKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
+ K EL L +LP +E+L + +PED L P+GK+ +I++ LV+I+++ N P ++ D+V+F
Sbjct: 165 KTKDELLLNELPSVEELTVILPEDIALKPLGKVSSIIEQLVIIESVTNIPPVNEDTVIFK 224
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQT-EHTSYVPLPD 122
Q + GKIF++ GPV+ P Y +RFNS HI IKI+ +Y AP + T Y+
Sbjct: 225 SDRQAA-GKIFEIFGPVAHPFYVLRFNSSDHIESKGIKINDTMYFAPSMKDFTQYIFTEK 283
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + +GSDASW+ DQEPPPEV++FSDDE+E+ K+ +
Sbjct: 284 LKQDRGSDASWKNDQEPPPEVLDFSDDEKEKEAKQRK 320
Score = 45 (20.9 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 176 PPDVPPEPKTRRPTPFE 192
PP +PP P P+P E
Sbjct: 463 PPPLPPPPPPPPPSPGE 479
>RGD|1306802 [details] [associations]
symbol:Naf1 "nuclear assembly factor 1 ribonucleoprotein"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA;ISO] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA;ISO;ISS] InterPro:IPR007504 Pfam:PF04410 RGD:1306802
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0030054
GO:GO:0030515 GO:GO:0042254 GO:GO:0003723 GO:GO:0006364
GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 KO:K14763
GO:GO:0005732 eggNOG:NOG275663 CTD:92345 HOVERGEN:HBG108169
HOGENOM:HOG000214085 EMBL:BC094302 IPI:IPI00358278
RefSeq:NP_001019943.1 UniGene:Rn.162269 ProteinModelPortal:Q52KK4
SMR:Q52KK4 STRING:Q52KK4 PRIDE:Q52KK4 GeneID:306387 KEGG:rno:306387
UCSC:RGD:1306802 NextBio:655989 ArrayExpress:Q52KK4
Genevestigator:Q52KK4 Uniprot:Q52KK4
Length = 457
Score = 359 (131.4 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 69/157 (43%), Positives = 107/157 (68%)
Query: 5 RNKGELDLGDLPPIEDLQISVPEDQCL-PVGKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
+ K EL L +LP +E+L +++PED L P+GK+ +I++ LV+I+++ N P ++ D+V+F
Sbjct: 137 KTKDELLLNELPSVEELTVTLPEDIALKPLGKVSSIIEQLVIIESMTNIPPVNEDTVIFK 196
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQT-EHTSYVPLPD 122
Q + GKIF++ GPV+ P Y +RFNS +HI IKI +Y AP + T Y+
Sbjct: 197 SDRQAA-GKIFEIFGPVAHPFYVLRFNSSEHIESKGIKIKDTMYFAPSMKDFTQYIFTEK 255
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + +GSDASW+ DQEPPPE ++FSDDE+E+ K+ +
Sbjct: 256 LKQDRGSDASWKNDQEPPPEALDFSDDEKEKEAKQRK 292
Score = 38 (18.4 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 176 PPDVPPEPKTRRPTPFE 192
PP +PP P P+P E
Sbjct: 433 PPPLPPPPPP--PSPGE 447
>UNIPROTKB|Q52KK4 [details] [associations]
symbol:Naf1 "H/ACA ribonucleoprotein complex non-core
subunit NAF1" species:10116 "Rattus norvegicus" [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=IEA] InterPro:IPR007504 Pfam:PF04410 RGD:1306802
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0030054
GO:GO:0030515 GO:GO:0042254 GO:GO:0003723 GO:GO:0006364
GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 KO:K14763
GO:GO:0005732 eggNOG:NOG275663 CTD:92345 HOVERGEN:HBG108169
HOGENOM:HOG000214085 EMBL:BC094302 IPI:IPI00358278
RefSeq:NP_001019943.1 UniGene:Rn.162269 ProteinModelPortal:Q52KK4
SMR:Q52KK4 STRING:Q52KK4 PRIDE:Q52KK4 GeneID:306387 KEGG:rno:306387
UCSC:RGD:1306802 NextBio:655989 ArrayExpress:Q52KK4
Genevestigator:Q52KK4 Uniprot:Q52KK4
Length = 457
Score = 359 (131.4 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 69/157 (43%), Positives = 107/157 (68%)
Query: 5 RNKGELDLGDLPPIEDLQISVPEDQCL-PVGKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
+ K EL L +LP +E+L +++PED L P+GK+ +I++ LV+I+++ N P ++ D+V+F
Sbjct: 137 KTKDELLLNELPSVEELTVTLPEDIALKPLGKVSSIIEQLVIIESMTNIPPVNEDTVIFK 196
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQT-EHTSYVPLPD 122
Q + GKIF++ GPV+ P Y +RFNS +HI IKI +Y AP + T Y+
Sbjct: 197 SDRQAA-GKIFEIFGPVAHPFYVLRFNSSEHIESKGIKIKDTMYFAPSMKDFTQYIFTEK 255
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + +GSDASW+ DQEPPPE ++FSDDE+E+ K+ +
Sbjct: 256 LKQDRGSDASWKNDQEPPPEALDFSDDEKEKEAKQRK 292
Score = 38 (18.4 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 176 PPDVPPEPKTRRPTPFE 192
PP +PP P P+P E
Sbjct: 433 PPPLPPPPPP--PSPGE 447
>UNIPROTKB|F1LMR4 [details] [associations]
symbol:Naf1 "H/ACA ribonucleoprotein complex non-core
subunit NAF1" species:10116 "Rattus norvegicus" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR007504 Pfam:PF04410 RGD:1306802 GO:GO:0005737
GO:GO:0005813 GO:GO:0030054 GO:GO:0030515 GO:GO:0042254
GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0005732
GeneTree:ENSGT00390000004697 IPI:IPI00358278
Ensembl:ENSRNOT00000033916 ArrayExpress:F1LMR4 Uniprot:F1LMR4
Length = 389
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 69/157 (43%), Positives = 107/157 (68%)
Query: 5 RNKGELDLGDLPPIEDLQISVPEDQCL-PVGKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
+ K EL L +LP +E+L +++PED L P+GK+ +I++ LV+I+++ N P ++ D+V+F
Sbjct: 137 KTKDELLLNELPSVEELTVTLPEDIALKPLGKVSSIIEQLVIIESMTNIPPVNEDTVIFK 196
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQT-EHTSYVPLPD 122
Q + GKIF++ GPV+ P Y +RFNS +HI IKI +Y AP + T Y+
Sbjct: 197 SDRQAA-GKIFEIFGPVAHPFYVLRFNSSEHIESKGIKIKDTMYFAPSMKDFTQYIFTEK 255
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + +GSDASW+ DQEPPPE ++FSDDE+E+ K+ +
Sbjct: 256 LKQDRGSDASWKNDQEPPPEALDFSDDEKEKEAKQRK 292
>UNIPROTKB|F1NV75 [details] [associations]
symbol:NAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030515 "snoRNA binding" evidence=IEA] [GO:0031120
"snRNA pseudouridine synthesis" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR007504 Pfam:PF04410
GO:GO:0030515 GO:GO:0042254 GO:GO:0031120 InterPro:IPR009000
SUPFAM:SSF50447 GeneTree:ENSGT00390000004697 EMBL:AADN02016447
IPI:IPI00821289 Ensembl:ENSGALT00000015459 ArrayExpress:F1NV75
Uniprot:F1NV75
Length = 398
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 68/157 (43%), Positives = 105/157 (66%)
Query: 5 RNKGELDLGDLPPIEDLQISVPEDQCLPV-GKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
R K EL L +LPP+EDL + +P++ L + G + +I++ LV+I++L+ P ++ +S++F
Sbjct: 83 RTKDELPLDELPPVEDLTVILPDNVELKLFGTVSSIIEQLVIIESLRGLPPINEESIIFK 142
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQTEH-TSYVPLPD 122
+ Q + GK+F+V GPV P Y +RFNS +HI I + ++Y AP E T Y+
Sbjct: 143 EDRQAA-GKVFEVFGPVQHPFYVLRFNSAEHIKAKGINVQDNMYFAPSVEDFTQYIFAEK 201
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + KGSDASW+ DQEPPPE ++FSDDE+ER K+ +
Sbjct: 202 LQQEKGSDASWKNDQEPPPEALDFSDDEKEREAKQKK 238
>UNIPROTKB|F1NWY4 [details] [associations]
symbol:NAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030515 "snoRNA binding" evidence=IEA] [GO:0031120
"snRNA pseudouridine synthesis" evidence=IEA] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR007504 Pfam:PF04410
GO:GO:0005737 GO:GO:0005813 GO:GO:0030054 GO:GO:0030515
GO:GO:0042254 GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447
GO:GO:0005732 GeneTree:ENSGT00390000004697 OMA:MHNFSLP
EMBL:AADN02016447 IPI:IPI00582158 Ensembl:ENSGALT00000038789
ArrayExpress:F1NWY4 Uniprot:F1NWY4
Length = 427
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 68/157 (43%), Positives = 105/157 (66%)
Query: 5 RNKGELDLGDLPPIEDLQISVPEDQCLPV-GKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
R K EL L +LPP+EDL + +P++ L + G + +I++ LV+I++L+ P ++ +S++F
Sbjct: 115 RTKDELPLDELPPVEDLTVILPDNVELKLFGTVSSIIEQLVIIESLRGLPPINEESIIFK 174
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQTEH-TSYVPLPD 122
+ Q + GK+F+V GPV P Y +RFNS +HI I + ++Y AP E T Y+
Sbjct: 175 EDRQAA-GKVFEVFGPVQHPFYVLRFNSAEHIKAKGINVQDNMYFAPSVEDFTQYIFAEK 233
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + KGSDASW+ DQEPPPE ++FSDDE+ER K+ +
Sbjct: 234 LQQEKGSDASWKNDQEPPPEALDFSDDEKEREAKQKK 270
>UNIPROTKB|Q96HR8 [details] [associations]
symbol:NAF1 "H/ACA ribonucleoprotein complex non-core
subunit NAF1" species:9606 "Homo sapiens" [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR007504
Pfam:PF04410 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0030054 GO:GO:0030515 GO:GO:0042254 GO:GO:0003723
EMBL:CH471056 GO:GO:0006364 GO:GO:0031120 InterPro:IPR009000
SUPFAM:SSF50447 KO:K14763 GO:GO:0005732 eggNOG:NOG275663
EMBL:AC022272 EMBL:BC008207 IPI:IPI00063219 RefSeq:NP_001122403.1
RefSeq:NP_612395.2 UniGene:Hs.129095 PDB:2EQN PDBsum:2EQN
ProteinModelPortal:Q96HR8 SMR:Q96HR8 IntAct:Q96HR8 STRING:Q96HR8
PhosphoSite:Q96HR8 DMDM:296439238 PaxDb:Q96HR8 PRIDE:Q96HR8
Ensembl:ENST00000274054 GeneID:92345 KEGG:hsa:92345 UCSC:uc003iqj.3
CTD:92345 GeneCards:GC04M164047 H-InvDB:HIX0004605 HGNC:HGNC:25126
HPA:HPA036242 neXtProt:NX_Q96HR8 PharmGKB:PA162396775
HOGENOM:HOG000168512 HOVERGEN:HBG108169 InParanoid:Q96HR8
OMA:MHNFSLP PhylomeDB:Q96HR8 EvolutionaryTrace:Q96HR8
GenomeRNAi:92345 NextBio:77719 ArrayExpress:Q96HR8 Bgee:Q96HR8
CleanEx:HS_NAF1 Genevestigator:Q96HR8 Uniprot:Q96HR8
Length = 494
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 68/157 (43%), Positives = 105/157 (66%)
Query: 5 RNKGELDLGDLPPIEDLQISVPED-QCLPVGKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
+ K EL L +LP +E+L I +PED + P+G + +I++ LV+I+++ N P ++ ++V+F
Sbjct: 172 KTKDELLLNELPSVEELTIILPEDIELKPLGMVSSIIEQLVIIESMTNLPPVNEETVIFK 231
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQT-EHTSYVPLPD 122
Q + GKIF++ GPV+ P Y +RFNS HI IKI + +Y AP + T Y+
Sbjct: 232 SDRQAA-GKIFEIFGPVAHPFYVLRFNSSDHIESKGIKIKETMYFAPSMKDFTQYIFTEK 290
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + KGSDASW+ DQEPPPE ++FSDDE+E+ K+ +
Sbjct: 291 LKQDKGSDASWKNDQEPPPEALDFSDDEKEKEAKQRK 327
>UNIPROTKB|Q1RMQ2 [details] [associations]
symbol:LOC514182 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
[GO:0031120 "snRNA pseudouridine synthesis" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] InterPro:IPR007504
Pfam:PF04410 GO:GO:0005737 GO:GO:0005813 GO:GO:0030054
GO:GO:0030515 GO:GO:0042254 GO:GO:0031120 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0005732 eggNOG:NOG275663
GeneTree:ENSGT00390000004697 HOGENOM:HOG000168512 EMBL:DAAA02015211
EMBL:BC114778 IPI:IPI00843064 UniGene:Bt.23295 SMR:Q1RMQ2
STRING:Q1RMQ2 Ensembl:ENSBTAT00000052013 OMA:SQGENTE Uniprot:Q1RMQ2
Length = 360
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 67/157 (42%), Positives = 106/157 (67%)
Query: 5 RNKGELDLGDLPPIEDLQISVPED-QCLPVGKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
+ K EL L +LP +E+L I +PED + P+G + +I++ LV+I+++ N P ++ ++V+F
Sbjct: 135 KTKDELLLSELPSVEELTIVLPEDIELKPLGMVSSIIEQLVIIESMTNVPPVNEETVIFK 194
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQT-EHTSYVPLPD 122
Q + GKIF++ GPV+ P Y +RFNS +HI + IKI +Y AP + T Y+
Sbjct: 195 TDRQAA-GKIFEIFGPVAHPFYVLRFNSSEHIENKGIKIKDTMYFAPSMKDFTQYIFTEK 253
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + +GSDASW+ DQEPPPE ++FSDDE+E+ K+ +
Sbjct: 254 LKQDRGSDASWKNDQEPPPEALDFSDDEKEKEAKQRK 290
>UNIPROTKB|F1RTX5 [details] [associations]
symbol:NAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IEA]
[GO:0031120 "snRNA pseudouridine synthesis" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] InterPro:IPR007504
Pfam:PF04410 GO:GO:0005737 GO:GO:0005813 GO:GO:0030054
GO:GO:0030515 GO:GO:0042254 GO:GO:0031120 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0005732 GeneTree:ENSGT00390000004697
OMA:MHNFSLP EMBL:CU694565 Ensembl:ENSSSCT00000009730 Uniprot:F1RTX5
Length = 461
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 66/157 (42%), Positives = 105/157 (66%)
Query: 5 RNKGELDLGDLPPIEDLQISVPED-QCLPVGKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
+ K EL L +LP +E+L I +PED + P+G + ++++ LV+I+++ N P ++ ++V+F
Sbjct: 135 KTKDELLLSELPSVEELTIILPEDIELKPLGMVSSVIEQLVIIESMTNIPPVNEETVIFK 194
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQT-EHTSYVPLPD 122
Q + GKIF++ GPV+ P Y +RFNS +HI IKI +Y AP + T Y+
Sbjct: 195 SDRQAA-GKIFEIFGPVAHPFYVLRFNSSEHIESKGIKIKDTMYFAPSMKDFTQYIFTEK 253
Query: 123 LIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + +GSDASW+ DQEPPPE ++FSDDE+E+ K+ +
Sbjct: 254 LKQDRGSDASWKNDQEPPPEALDFSDDEKEKEAKQRK 290
>UNIPROTKB|J9P780 [details] [associations]
symbol:NAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0031120 "snRNA pseudouridine synthesis" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] InterPro:IPR007504
Pfam:PF04410 GO:GO:0030515 GO:GO:0042254 GO:GO:0031120
InterPro:IPR009000 SUPFAM:SSF50447 GeneTree:ENSGT00390000004697
EMBL:AAEX03010099 Ensembl:ENSCAFT00000046594 OMA:AKVFEVF
Uniprot:J9P780
Length = 296
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 53/125 (42%), Positives = 84/125 (67%)
Query: 36 ILNIVDTLVLIKTLKNTPTLDLDSVLFLDKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHI 95
+ +I++ LV+I+++ N P ++ ++V+F Q + GKIF++ GPV+ P Y +RFNS +HI
Sbjct: 2 VSSIIEQLVIIESMTNLPPVNEETVIFKSDRQAA-GKIFEIFGPVAHPFYVLRFNSSEHI 60
Query: 96 VDSNIKIDQDVYCAPQT-EHTSYVPLPDLIKVKGSDASWERDQEPPPEVVEFSDDEEERR 154
IKI +Y AP + T Y+ L + +GSDASW+ DQEPPPE ++FSDDE+E+
Sbjct: 61 ESKGIKIKDTMYFAPSMKDFTQYIFTEKLKQDRGSDASWKNDQEPPPEALDFSDDEKEKE 120
Query: 155 VKRNQ 159
K+ +
Sbjct: 121 AKQRK 125
>TAIR|locus:2020713 [details] [associations]
symbol:NAF1 "nuclear assembly factor 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0031120 "snRNA
pseudouridine synthesis" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0006606 "protein import into nucleus" evidence=RCA]
InterPro:IPR007504 Pfam:PF04410 EMBL:CP002684 GO:GO:0009506
EMBL:AC002560 GO:GO:0030515 GO:GO:0042254 GO:GO:0031120
InterPro:IPR009000 SUPFAM:SSF50447 KO:K14763 IPI:IPI00520210
PIR:T00905 RefSeq:NP_171852.2 UniGene:At.42540
ProteinModelPortal:Q9LR70 SMR:Q9LR70 STRING:Q9LR70 PRIDE:Q9LR70
EnsemblPlants:AT1G03530.1 GeneID:839468 KEGG:ath:AT1G03530
TAIR:At1g03530 InParanoid:Q9LR70 OMA:WITEKRT
ProtClustDB:CLSN2719834 Genevestigator:Q9LR70 Uniprot:Q9LR70
Length = 801
Score = 210 (79.0 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 51/156 (32%), Positives = 88/156 (56%)
Query: 5 RNKGELDLGDLPPIEDLQISV-PEDQCLPVGKILNIVDTLVLIKTLKNTPTLDLDSVLFL 63
R+K EL +LPP+ + +++ P LPVG +L+++ V+++ ++ L S+L++
Sbjct: 357 RSKNELK--ELPPVPPVDVTLEPHHATLPVGVVLSVMSAQVIVEGMEKHSPLTEGSILWI 414
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQTEHTSYVPLPDL 123
+ + LG + ++ GPV P Y VRFNS + + + + A +H + + +L
Sbjct: 415 TEKRTPLGLVDEIFGPVKCPYYIVRFNSESEVPEGVCQGTPVSFVADFAQHI--LNIKEL 472
Query: 124 IKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
K KG DAS + D+E P E+ EFSDDE+E +R Q
Sbjct: 473 QK-KGYDASGDNDEEIPDEL-EFSDDEKEAEYRRMQ 506
>WB|WBGene00009132 [details] [associations]
symbol:F25H8.2 species:6239 "Caenorhabditis elegans"
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0031120 "snRNA
pseudouridine synthesis" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0019915 "lipid storage" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR007504 Pfam:PF04410 GO:GO:0006898 GO:GO:0040010
GO:GO:0030515 GO:GO:0042254 GO:GO:0019915 GO:GO:0040035
GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:Z69360
eggNOG:NOG275663 GeneTree:ENSGT00390000004697 PIR:T21367
RefSeq:NP_501790.1 ProteinModelPortal:Q19788 SMR:Q19788
DIP:DIP-26266N MINT:MINT-1038439 STRING:Q19788 PaxDb:Q19788
EnsemblMetazoa:F25H8.2 GeneID:177848 KEGG:cel:CELE_F25H8.2
UCSC:F25H8.2 CTD:177848 WormBase:F25H8.2 HOGENOM:HOG000017157
InParanoid:Q19788 OMA:VDCQVVI NextBio:898644 Uniprot:Q19788
Length = 390
Score = 202 (76.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 69/175 (39%), Positives = 87/175 (49%)
Query: 2 KSTRNKGELDLGDLPPIEDLQISVPEDQCLPVGKILNIVDT-LVLIKTLKNTPTLDLDSV 60
+ TRN E D D+PP+E+L I + Q L G + +VD +V+I T T LD DS
Sbjct: 140 QKTRNVHEYD--DMPPLENLSIEC-KGQLLEFGFVSKVVDCQVVIISTC--TEVLDFDSF 194
Query: 61 LFLDKGQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQTEHTSYVPL 120
LF KG +LG+I+D+ G V P Y +RFNS + S I ID VY AP E S P
Sbjct: 195 LFDQKGN-ALGQIYDIFGQVKNPQYVIRFNSCEEA--SMIPIDMKVYYAPTEEQFSKTPF 251
Query: 121 PDL-IKVKGSDA--SWER--DQ--------EPPPEV-----VEFSDDEEERRVKR 157
L + DA S R D E +V VEFSDDE E+ KR
Sbjct: 252 KGLNLAAANRDAIKSLNRRIDHQEAVAKAGETMAQVGIGSDVEFSDDEAEKEFKR 306
>UNIPROTKB|G4N8S8 [details] [associations]
symbol:MGG_10116 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005635 "nuclear envelope"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0016074 "snoRNA metabolic process" evidence=ISS]
InterPro:IPR007504 Pfam:PF04410 GO:GO:0005635 GO:GO:0005654
GO:GO:0005730 GO:GO:0006461 GO:GO:0030515 GO:GO:0042254
GO:GO:0003723 EMBL:CM001234 GO:GO:0016074 GO:GO:0031120
InterPro:IPR009000 SUPFAM:SSF50447 KO:K14763 RefSeq:XP_003717393.1
ProteinModelPortal:G4N8S8 EnsemblFungi:MGG_10116T0 GeneID:2681727
KEGG:mgr:MGG_10116 Uniprot:G4N8S8
Length = 656
Score = 192 (72.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 57/160 (35%), Positives = 84/160 (52%)
Query: 2 KSTRNKGELDLGDLPPIEDLQISVPED-QCLPVGKILNIVDTLVLIKTLKNTPTLDLDSV 60
+ R+K E D P + ++++ ED + LP+G IL IV VLI++ + LD
Sbjct: 256 RQVRSKNEQP--DWVPPKP-EVTITEDMEILPLGSILRIVGNTVLIQSGDDGEERVLDIE 312
Query: 61 LFLDKGQRSL-GKIFDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQTEHTSYVP 119
+ + RS+ I DVIG V P+Y +RF + + + + D V+ +PQ H V
Sbjct: 313 TAVCRADRSIIAAIADVIGSVLRPMYILRFATSEDVEKEGLTTDMPVFYSPQ--HAQVVL 370
Query: 120 LPDLIKVKGSDASWERDQEPPPEVVEFSDDEEERRVKRNQ 159
L + KG DAS D+E P E EFSDDE+E+ KR Q
Sbjct: 371 TRALRQQKGYDASNLHDEEIPMEDQEFSDDEQEQAHKRQQ 410
>ASPGD|ASPL0000057096 [details] [associations]
symbol:AN0728 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0031120 "snRNA pseudouridine
synthesis" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
InterPro:IPR007504 Pfam:PF04410 EMBL:BN001308 GO:GO:0030515
GO:GO:0042254 EMBL:AACD01000012 GO:GO:0031120 InterPro:IPR009000
SUPFAM:SSF50447 KO:K14763 eggNOG:NOG275663 OrthoDB:EOG4JQ769
RefSeq:XP_658332.1 ProteinModelPortal:Q5BFF2
EnsemblFungi:CADANIAT00001936 GeneID:2876506 KEGG:ani:AN0728.2
HOGENOM:HOG000205413 OMA:HDEEVGE Uniprot:Q5BFF2
Length = 680
Score = 167 (63.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 53/172 (30%), Positives = 82/172 (47%)
Query: 17 PIEDLQISVPEDQCLPVGKILNIVDTLVLI--KTLKNTPTLDLDSVLFLDKGQRSLGKIF 74
PI D+ I+ PE + + +G + +D VLI T L+ S+L L+ +R G +
Sbjct: 276 PIPDISIT-PEMKIVLLGHVEAAIDNTVLIAANTTGEYQVLEAGSLLCLED-RRVAGVVS 333
Query: 75 DVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQTEHTSYVPLPDLIKVKGSDASWE 134
+ +G V P+Y VRF + + + VY +H+++V L +KGSDAS
Sbjct: 334 ETLGRVENPLYAVRFATTADVEKHGLSRGTVVYYV--VDHSTFVFTQPLKGLKGSDASNF 391
Query: 135 RDQEPPPEVVEFSDDEEERRVKRN-QLXXXXXXXXXXXDG--TDPPDVPPEP 183
D+E + VEFSDDE+E +R + DG + P PP P
Sbjct: 392 HDEEVGEDEVEFSDDEQEAEYRRKLKQKRQERKGAKNQDGGPSKPAKGPPGP 443
>DICTYBASE|DDB_G0276085 [details] [associations]
symbol:DDB_G0276085 "H/ACA ribonucleoprotein complex
non-core subunit NAF1" species:44689 "Dictyostelium discoideum"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0031120 "snRNA
pseudouridine synthesis" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] InterPro:IPR007504 Pfam:PF04410
dictyBase:DDB_G0276085 GO:GO:0030515 EMBL:AAFI02000014
GO:GO:0042254 GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:NOG275663 RefSeq:XP_643286.1 ProteinModelPortal:Q75JJ6
EnsemblProtists:DDB0169488 GeneID:8620329 KEGG:ddi:DDB_G0276085
InParanoid:Q75JJ6 OMA:DIDSIVC Uniprot:Q75JJ6
Length = 812
Score = 129 (50.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 31/94 (32%), Positives = 57/94 (60%)
Query: 8 GELDLGDLPPIEDLQISVPED-QCLPVGKILNIVDTLVLIKTLKN-TPTLDLDSVLFLDK 65
G+ DLP E + + +P++ Q G + +IVD +++IK++ + LD+DS++ L +
Sbjct: 293 GDNSDNDLPKEEPIFVEIPKEVQICEFGILKSIVDDVLVIKSINVVSQALDIDSIVCL-Q 351
Query: 66 GQRSLGKIFDVIGPVSGPVYCVRFNSHQHIVDSN 99
+ ++G+I++V G V P+Y VR S+ I SN
Sbjct: 352 DRTTIGRIYEVFGQVFQPIYSVRIPSNLDITISN 385
Score = 88 (36.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 100 IKIDQDVYCAPQTEHTSYVPLPDLIKVKGSDASWERDQEPPPEVVEFSDDEEERRVK 156
++ D +Y Q + + +V + I KG DAS E D E ++FSDDE+ER K
Sbjct: 533 LQADTKIYYVNQPDLSKFV-IASQIYTKGFDASNENDDELEENEMDFSDDEKEREFK 588
>POMBASE|SPBC30D10.15 [details] [associations]
symbol:SPBC30D10.15 "snoRNP assembly factor Naf1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000493
"box H/ACA snoRNP assembly" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=NAS] [GO:0006364 "rRNA processing" evidence=IC]
[GO:0030515 "snoRNA binding" evidence=ISM] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0031120 "snRNA
pseudouridine synthesis" evidence=IEA] InterPro:IPR007504
Pfam:PF04410 PomBase:SPBC30D10.15 GO:GO:0005635 GO:GO:0005654
GO:GO:0005730 EMBL:CU329671 GO:GO:0030515 GenomeReviews:CU329671_GR
GO:GO:0030529 GO:GO:0006364 GO:GO:0031120 InterPro:IPR009000
SUPFAM:SSF50447 KO:K14763 eggNOG:NOG275663 PIR:T40181
RefSeq:NP_596270.1 ProteinModelPortal:O14360 STRING:O14360
EnsemblFungi:SPBC30D10.15.1 GeneID:2540349 KEGG:spo:SPBC30D10.15
OMA:HESINSD OrthoDB:EOG4JQ769 NextBio:20801477 GO:GO:0000493
Uniprot:O14360
Length = 516
Score = 159 (61.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 46/133 (34%), Positives = 66/133 (49%)
Query: 26 PEDQCLPVGKILNIVDTLVLIKTLKNTPTLDLDSVLFLDKGQRSL-GKIFDVIGPVSGPV 84
P P+GKI+ ++ V++K+ + + D L RS+ G I + GPVS P
Sbjct: 246 PNSLIEPLGKIIQVLKREVVVKSDIDDEKIVFDEKTVLCFEDRSIIGYIHETFGPVSSPY 305
Query: 85 YCVRFNSHQHIVDSNIKIDQDVYCAPQTEHTSYVPLPDLIKVKGSDASWERDQEPPPEVV 144
Y VRF++ + N + + V+ P T P P L +KGSDAS D+E P
Sbjct: 306 YIVRFSTEEECSAINACMGRPVFYVP-TMANKIDPEP-LKYIKGSDASNVYDEEINPSEQ 363
Query: 145 EFSDDEEERRVKR 157
EFSDDE E K+
Sbjct: 364 EFSDDEAEVAAKQ 376
>CGD|CAL0005870 [details] [associations]
symbol:orf19.494 species:5476 "Candida albicans" [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0000493 "box H/ACA snoRNP assembly"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR007504 Pfam:PF04410 CGD:CAL0005870 GO:GO:0030515
GO:GO:0042254 EMBL:AACQ01000055 GO:GO:0031120 InterPro:IPR009000
SUPFAM:SSF50447 KO:K14763 eggNOG:NOG275663 RefSeq:XP_717357.1
ProteinModelPortal:Q5A6R0 STRING:Q5A6R0 GeneID:3641026
KEGG:cal:CaO19.494 Uniprot:Q5A6R0
Length = 612
Score = 152 (58.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 48/168 (28%), Positives = 75/168 (44%)
Query: 16 PPIED-LQISVPEDQCLPVGKILNIVDTLVLIKTLKNTPTLDL-DSVLFLDKGQRSLGKI 73
P + D +IS P +G+I +V+ ++IK + L + +F + + +G +
Sbjct: 280 PSLPDNYEIS-PNTPIEEIGEITGLVENTMIIKARTSGEFRILQEKSIFCFEDRTVIGPL 338
Query: 74 FDVIGPVSGPVYCVRFNSHQHIVDSNIKIDQDVYCAPQTEHTSYVPLPDLIK-VKGSDAS 132
F++ G V PVY V+FNS + + VY Y D IK +KG+DAS
Sbjct: 339 FEIFGRVQQPVYSVKFNSEEQFSKFKESKGKTVYYVVPDSQFLYT---DSIKHIKGTDAS 395
Query: 133 WERDQEPPPEVVEFSDDEEERRVKRNQLXXXXXXXXXXXDGTDPPDVP 180
D+E P E E+SDDE+E K + T P +P
Sbjct: 396 NCHDEELPEEEQEYSDDEKESAAKSAKKKKKNKKTKDKQTHTSGPSLP 443
>SGD|S000005068 [details] [associations]
symbol:NAF1 "RNA-binding protein required for the assembly of
box H/ACA snoRNPs" species:4932 "Saccharomyces cerevisiae"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0000493 "box H/ACA
snoRNP assembly" evidence=IMP;IPI] [GO:0003723 "RNA binding"
evidence=IEA;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR007504 Pfam:PF04410 SGD:S000005068 GO:GO:0005654
GO:GO:0030515 EMBL:BK006947 GO:GO:0003723 GO:GO:0030529 EMBL:Z69382
GO:GO:0006364 GO:GO:0031120 InterPro:IPR009000 SUPFAM:SSF50447
RefSeq:NP_014275.3 GeneID:855599 KEGG:sce:YNL124W KO:K14763
EMBL:EF125216 EMBL:EF125217 EMBL:EF125218 EMBL:EF125219
EMBL:EF125220 EMBL:EF125221 EMBL:EF125222 EMBL:EF125223
EMBL:EF125224 EMBL:EF125225 EMBL:EF125226 EMBL:EF125228
RefSeq:NP_014283.3 GeneID:855607 KEGG:sce:YNL116W eggNOG:NOG275663
GeneTree:ENSGT00390000004697 OMA:TVPEDEC OrthoDB:EOG4JQ769
GO:GO:0000493 EMBL:Z71400 PIR:S63065 PDB:2V3M PDBsum:2V3M
ProteinModelPortal:P53919 SMR:P53919 DIP:DIP-4345N IntAct:P53919
MINT:MINT-501196 STRING:P53919 PaxDb:P53919 EnsemblFungi:YNL124W
CYGD:YNL124w EvolutionaryTrace:P53919 NextBio:979759
Genevestigator:P53919 GermOnline:YNL124W Uniprot:P53919
Length = 492
Score = 141 (54.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 53/231 (22%), Positives = 107/231 (46%)
Query: 6 NKGELDLGDLPPI-EDLQISVPEDQCLPVGKILNIVDTLVLIK-TLKNTPTLDLDSVLFL 63
+K E+ +P + ED +IS + P+G + + + ++I T+ + + +F
Sbjct: 113 SKNEILEETVPELPEDYEIS-EKTIITPIGVLKSAFENNIIIHATMSGEKRVLKEGSIFC 171
Query: 64 DKGQRSLGKIFDVIGPVSGPVYCVRF-NSHQHIVDS-NIKIDQDVYCAPQTEHTSYVPLP 121
+ + +G + +V GP+ P Y ++ +S +++ D +++ + + H ++
Sbjct: 172 LEDRTLIGMLTEVFGPLQNPFYRIKLPDSKKNLFDELKVRLGEKAFIVTPDAH--WIDTF 229
Query: 122 DLIKVKGSDASWERDQEPPPEVVEFSDDEEE---RRVKRNQLXXXXXXXXXXXDGTDPPD 178
+L + KG+DAS D+E P E EFSDDE+E +++K+ Q + +D
Sbjct: 230 ELKRNKGTDASNGYDEELPEEEQEFSDDEKEALFKKMKKQQRQRKKRDNRKLANDSDNVK 289
Query: 179 VPP--EPKTRRPTPFEQRMNLR-NLLMTASYERRN-RINDTATTSRPANKS 225
V +PK + + N M Y+ RN R N +S +N++
Sbjct: 290 VKRARQPKANSLPKLVPPLGMSSNAPMQHGYKSRNARENIKRESSATSNRN 340
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.137 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 274 234 0.00087 113 3 11 22 0.45 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 603 (64 KB)
Total size of DFA: 178 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.57u 0.07s 24.64t Elapsed: 00:00:22
Total cpu time: 24.57u 0.07s 24.64t Elapsed: 00:00:22
Start: Thu Aug 15 13:08:40 2013 End: Thu Aug 15 13:09:02 2013