BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8582
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VTI8|CHRB_DROME Protein charybde OS=Drosophila melanogaster GN=chrb PE=2 SV=2
Length = 299
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
Query: 20 EDIEDSASIFLSNRLEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGC 79
+D+ SA LS +L+ +LR AK LAC EV LP+DL +A +I+R++E EP G + C
Sbjct: 164 DDVSASAVRELSQQLQAQLRDAKRRHLACTEVTLPNDLTQRIAAEIIRMSEREPCGERAC 223
Query: 80 TLFINFETD-QECRKIATITCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLKNLTKGGTI 138
TLFI FE++ + ++IA DP+TVS FELYLTLRQD + W SL+PQF+KNLT+ TI
Sbjct: 224 TLFIEFESEPNKVKRIAYFKVDPDTVSIFELYLTLRQD-KSGWSSLVPQFIKNLTRSNTI 282
Query: 139 MISRGFTLEKKRLYRT 154
IS FTL KK+LY +
Sbjct: 283 NISPDFTLTKKKLYSS 298
>sp|Q9VTH4|SCLLA_DROME Protein scylla OS=Drosophila melanogaster GN=scyl PE=2 SV=1
Length = 280
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 92/124 (74%), Gaps = 4/124 (3%)
Query: 30 LSNRLEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLFINFETD- 88
LS RL ELRAAKS L C EV LP DL P+VAR+I+R++E EP G++GCT++I FE +
Sbjct: 131 LSLRLLDELRAAKSRHLTCTEVSLPCDLTPSVAREIIRVSEKEPRGIRGCTIYIEFEDEP 190
Query: 89 QECRKIATITCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLKNLTKGGTIMISRGFTLEK 148
+ R+IA+I D +TVSTFE+YLTLRQD R W SLLPQF+K+L + TI IS +T+ K
Sbjct: 191 KNSRRIASIKVDSDTVSTFEVYLTLRQDHR-GWTSLLPQFMKSLAR--TITISPEYTITK 247
Query: 149 KRLY 152
+LY
Sbjct: 248 NKLY 251
>sp|Q2LZ58|CHRB_DROPS Protein charybde OS=Drosophila pseudoobscura pseudoobscura GN=chrb
PE=2 SV=1
Length = 289
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Query: 20 EDIEDSASIFLSNRLEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGC 79
+D+ SA LS +L+ +LR AK LAC EV LP+DL +A +I+R+++ EP G + C
Sbjct: 154 DDVSASAVRDLSQQLQFQLRDAKQRHLACTEVNLPADLTERIAAEIIRMSDREPCGERAC 213
Query: 80 TLFINFETD-QECRKIATITCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLKNLTKGGTI 138
TLFI FE++ R+IA+ DP+TVS FELYLTL+QD + W SLLPQF+KNLT+ TI
Sbjct: 214 TLFIEFESEPNNVRRIASFKVDPDTVSIFELYLTLKQD-KSGWTSLLPQFIKNLTRSNTI 272
Query: 139 MISRGFTLEKKRLYRT 154
IS FTL K +LY +
Sbjct: 273 NISPDFTLTKNKLYSS 288
>sp|Q8VD50|DDT4L_RAT DNA damage-inducible transcript 4-like protein OS=Rattus norvegicus
GN=Ddit4l PE=2 SV=1
Length = 193
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 87/167 (52%), Gaps = 21/167 (12%)
Query: 3 VLPNPVVFANNYEAFQQEDIEDSASIFLSNRLEQELRAAKSAQLACGEVLLPSDLLPNVA 62
V+P P + N F++ ++ L LE L +K +L C +VL+P L +A
Sbjct: 38 VVPEPNL---NEVVFEETTCQN-----LVKMLENCLSKSKQTKLGCSKVLVPEKLTQRIA 89
Query: 63 RDILRLAEVEPYGLKGCTLFINFETDQECRKIATITCDPNTVSTFELYLTLRQDFRHSWH 122
+D+LRL+ EP GL+GC + +N E + C+K+ I CD + V TFEL L +Q+ SW
Sbjct: 90 QDVLRLSSTEPCGLRGCVMHVNLEIENVCKKLDRIVCDASVVPTFELTLVFKQE-SCSWT 148
Query: 123 SLLPQFLKNLTKGG--------TIMISRGFTLEKKRLYRTYSDSIKE 161
SL F GG T+++S GF L KK+LY ++ E
Sbjct: 149 SLKDFFF----SGGRFSSGLRRTLILSSGFRLVKKKLYSLIGTTVIE 191
>sp|Q5R8K0|DDT4L_PONAB DNA damage-inducible transcript 4-like protein OS=Pongo abelii
GN=DDIT4L PE=2 SV=1
Length = 193
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 23 EDSASIFLSNRLEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLF 82
E+S L LE L +K +L C +VL+P L +A+D+LRL+ EP GL+GC +
Sbjct: 50 EESTCQNLVKMLENCLSKSKQTKLGCSKVLVPEKLTQRIAQDVLRLSSTEPCGLRGCVMH 109
Query: 83 INFETDQECRKIATITCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLK--NLTKG--GTI 138
+N E + C+K+ I CD + V TFEL L +Q+ SW S F + G T+
Sbjct: 110 VNLEIENVCKKLDRIVCDSSVVPTFELTLVFKQE-NCSWSSFRDFFFSRGRFSSGFRRTL 168
Query: 139 MISRGFTLEKKRLYRTYSDSIKE 161
++S GF L KK+LY ++ E
Sbjct: 169 ILSSGFRLVKKKLYSLIGATVIE 191
>sp|Q96D03|DDT4L_HUMAN DNA damage-inducible transcript 4-like protein OS=Homo sapiens
GN=DDIT4L PE=2 SV=1
Length = 193
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 23 EDSASIFLSNRLEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLF 82
E+S L LE L +K +L C +VL+P L +A+D+LRL+ EP GL+GC +
Sbjct: 50 EESTCQNLVKMLENCLSKSKQTKLGCSKVLVPEKLTQRIAQDVLRLSSTEPCGLRGCVMH 109
Query: 83 INFETDQECRKIATITCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLK--NLTKG--GTI 138
+N E + C+K+ I CD + V TFEL L +Q+ SW S F + G T+
Sbjct: 110 VNLEIENVCKKLDRIVCDSSVVPTFELTLVFKQE-NCSWTSFRDFFFSRGRFSSGFRRTL 168
Query: 139 MISRGFTLEKKRLYRTYSDSIKE 161
++S GF L KK+LY ++ E
Sbjct: 169 ILSSGFRLVKKKLYSLIGTTVIE 191
>sp|A2VDT9|DDT4L_BOVIN DNA damage-inducible transcript 4-like protein OS=Bos taurus
GN=DDIT4L PE=2 SV=1
Length = 193
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 23 EDSASIFLSNRLEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLF 82
E++ L LE L +K +L C VL+P L +A+D+LRL+ EP GL+GC +
Sbjct: 50 EETTCQSLVKMLENCLSKSKHTKLGCSRVLVPEKLTQRIAQDVLRLSSTEPCGLRGCVMH 109
Query: 83 INFETDQECRKIATITCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLK--NLTKG--GTI 138
+N E + C+K+ I CD + V TFEL L +Q+ SW S F + G T+
Sbjct: 110 VNLEIENVCKKLDRIVCDSSVVPTFELTLVFKQE-NCSWTSFRDFFFSRGRFSSGLRRTL 168
Query: 139 MISRGFTLEKKRLYRTYSDSIKE 161
++S GF L KK+LY ++ E
Sbjct: 169 ILSSGFRLVKKKLYSLIGTTVIE 191
>sp|Q8VHZ5|DDT4L_MOUSE DNA damage-inducible transcript 4-like protein OS=Mus musculus
GN=Ddit4l PE=1 SV=1
Length = 193
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 23 EDSASIFLSNRLEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLF 82
E++ L LE L +K +L C +VL+P L +A+D+LRL+ EP GL+GC +
Sbjct: 50 EETTCQNLVKMLENCLSRSKQTKLGCSKVLVPEKLTQRIAQDVLRLSSTEPCGLRGCVMH 109
Query: 83 INFETDQECRKIATITCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLK--NLTKG--GTI 138
+N E + C+K+ I CD + V TFEL L +Q+ W SL F + G T+
Sbjct: 110 VNLEIENVCKKLDRIVCDASVVPTFELTLVFKQE-SCPWTSLKDFFFSRGRFSSGLKRTL 168
Query: 139 MISRGFTLEKKRLYRTYSDSIKE 161
++S GF L KK+LY ++ E
Sbjct: 169 ILSSGFRLVKKKLYSLIGTTVIE 191
>sp|Q8VHZ9|DDIT4_RAT DNA damage-inducible transcript 4 protein OS=Rattus norvegicus
GN=Ddit4 PE=1 SV=1
Length = 229
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 18/132 (13%)
Query: 34 LEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLFINFETDQECRK 93
L++ L A+ +L+PS LL V +++LRLA EP GL+G L + E + C
Sbjct: 97 LQESLSQARLGSRRPARLLMPSQLLSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHS 156
Query: 94 IATITCDPNTVSTFELYLTLRQDFRHSW-----------HSLLPQFLKNLTKGGTIMISR 142
+A + DP+ V TF+L L LR D R W SL+P + ++LT +S
Sbjct: 157 VAQLALDPSLVPTFQLTLVLRLDSRL-WPKIQGLLSSANSSLVPGYSQSLT------LST 209
Query: 143 GFTLEKKRLYRT 154
GF + KK+LY +
Sbjct: 210 GFRVIKKKLYSS 221
>sp|Q9D3F7|DDIT4_MOUSE DNA damage-inducible transcript 4 protein OS=Mus musculus GN=Ddit4
PE=1 SV=1
Length = 229
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 18/132 (13%)
Query: 34 LEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLFINFETDQECRK 93
L++ L A+ +L+PS L+ V +++LRLA EP GL+G L + E + C
Sbjct: 97 LQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHS 156
Query: 94 IATITCDPNTVSTFELYLTLRQDFRHSW-----------HSLLPQFLKNLTKGGTIMISR 142
+A + DP+ V TF+L L LR D R W SL+P + ++LT +S
Sbjct: 157 VAQLALDPSLVPTFQLTLVLRLDSRL-WPKIQGLLSSANSSLVPGYSQSLT------LST 209
Query: 143 GFTLEKKRLYRT 154
GF + KK+LY +
Sbjct: 210 GFRVIKKKLYSS 221
>sp|Q9NX09|DDIT4_HUMAN DNA damage-inducible transcript 4 protein OS=Homo sapiens GN=DDIT4
PE=1 SV=1
Length = 232
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 34 LEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLFINFETDQECRK 93
L++ L A+ +L+PS L+ V +++LRLA EP GL+G L + E + C
Sbjct: 100 LQESLAQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHS 159
Query: 94 IATITCDPNTVSTFELYLTLRQD----------FRHSWHSLLPQFLKNLTKGGTIMISRG 143
+ + DP+ V TF+L L LR D F + LP F ++LT +S G
Sbjct: 160 VGQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLFSSANSPFLPGFSQSLT------LSTG 213
Query: 144 FTLEKKRLYRTYSDSIKE 161
F + KK+LY + I+E
Sbjct: 214 FRVIKKKLYSSEQLLIEE 231
>sp|Q6P4J6|DDIT4_XENTR DNA damage-inducible transcript 4 protein OS=Xenopus tropicalis
GN=ddit4 PE=2 SV=1
Length = 219
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 38 LRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLFINFETDQECRKIATI 97
L AK L C +L+P +LL N+ +++L LA EP GL+G + + E ++C +A I
Sbjct: 94 LTKAKINSLRCSRLLIPDELLCNLGQELLHLAYSEPCGLRGALIDLCVEHGKDCHSVAQI 153
Query: 98 TCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLKNLTKGG--TIMISRGFTLEKKRLYRTY 155
T D V TF+L + LR D R W + F G ++ +S GF + KK+LY +
Sbjct: 154 TVDQAVVPTFQLTVLLRLDSRL-WPRIQGLFSTKPVPGSGQSLKLSPGFKVLKKKLYSSE 212
Query: 156 SDSIKE 161
I+E
Sbjct: 213 ELIIEE 218
>sp|Q7SYV9|DDIT4_XENLA DNA damage-inducible transcript 4 protein OS=Xenopus laevis
GN=ddit4 PE=2 SV=1
Length = 219
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 38 LRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLFINFETDQECRKIATI 97
L A+ L C +L+P +LL N+ +++L LA EP GL+G + + E ++C +A I
Sbjct: 94 LTKARINSLRCSRLLIPDELLCNLGQELLHLAYSEPCGLRGALIDLCVENGKDCHSVAQI 153
Query: 98 TCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLKNLTKGG--TIMISRGFTLEKKRLYRTY 155
T D V TF+L + LR D R W + F G ++ +S GF + KK+LY +
Sbjct: 154 TVDQAVVPTFQLTVLLRLDSRL-WPRIQGLFSTKPVPGSGQSLKLSPGFKVLKKKLYSSE 212
Query: 156 SDSIKE 161
I+E
Sbjct: 213 ELIIEE 218
>sp|Q7T346|DDIT4_DANRE DNA damage-inducible transcript 4 protein OS=Danio rerio GN=ddit4
PE=2 SV=1
Length = 220
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 38 LRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLFINFETDQECRKIATI 97
L AK L C ++L+P LL ++ ++++ L+ EP GL+G + + E D C A I
Sbjct: 92 LTDAKDGVLHCSKLLIPEKLLEHIGQELVHLSVSEPCGLRGALIDLCVEQDGSCHAAAQI 151
Query: 98 TCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLKNLTKGGTI----MISRGFTLEKKRLYR 153
DP V TF+L L LR D R W + F + +S GF K++LY
Sbjct: 152 AVDPYLVPTFQLTLVLRLDSRGLWPKIQGLFTGRSPASPAVRRALRLSTGFRAIKRKLYS 211
Query: 154 TYSDSIKE 161
+ I+E
Sbjct: 212 SEELLIEE 219
>sp|Q08E62|DDIT4_BOVIN DNA damage-inducible transcript 4 protein OS=Bos taurus GN=DDIT4
PE=2 SV=1
Length = 229
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 34 LEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLFINFETDQECRK 93
L++ L A+ +L+P L+ V +++LRLA EP GL+G L + E + C
Sbjct: 97 LQESLAQARLGSRRPARLLMPGQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHS 156
Query: 94 IATITCDPNTVSTFELYLTLRQD----------FRHSWHSLLPQFLKNLTKGGTIMISRG 143
+ + DP+ V TF+L L LR D F + +P F ++LT +S G
Sbjct: 157 VGQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLFSSANSPFVPGFSQSLT------LSTG 210
Query: 144 FTLEKKRLYRTYSDSIKE 161
F + KK+LY + I+E
Sbjct: 211 FRVIKKKLYSSEQLLIEE 228
>sp|Q20A00|DDT4L_ONCMY DNA damage-inducible transcript 4-like protein OS=Oncorhynchus
mykiss GN=ddit4l PE=2 SV=1
Length = 206
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 7/134 (5%)
Query: 30 LSNRLEQELRAAKSAQLACGEVLLPSDLLPNVARDILRLAEVEPYGLKGCTLFINFETD- 88
++ ++ + L AK + L C +LLP L NVA D++R + EP GL+G + + ET
Sbjct: 76 MTRQIVRCLSEAKESSLRCRILLLPRTLTANVALDVVRSSAGEPCGLRGAFIQVYLETQL 135
Query: 89 -QECRKIATITCDPNTVSTFELYLTLRQDFRHSWHSLLPQFLKNLTKGGTIMISRGFTLE 147
Q+ + + TIT DP TFEL + + D + W L F+ + + + + L
Sbjct: 136 GQQLQMLGTITPDPTVTPTFELSVVFKLD-KDCWPLLKHIFVTD----KVLKLRPQYRLV 190
Query: 148 KKRLYRTYSDSIKE 161
KK+LY + S I E
Sbjct: 191 KKKLYSSASPVIHE 204
>sp|Q5KWH6|UVRC_GEOKA UvrABC system protein C OS=Geobacillus kaustophilus (strain HTA426)
GN=uvrC PE=1 SV=1
Length = 590
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 41 AKSAQLACGEVLLPSDLLPNVARDILRLAEVEP 73
AK+ L EV+LPSD+ +AR++L +A V+P
Sbjct: 296 AKAHHLKPKEVVLPSDIDGELARELLGVAVVQP 328
>sp|Q84LH3|WEX_ARATH Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX
PE=1 SV=1
Length = 288
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 101 PNTVSTFELYLTLRQ-DFRHSWHSLLPQFLKNLTKGGTIM-ISRGFTLEKKRLYRTYSDS 158
P V+T ++ + D H +HS +PQ L++L + T++ + G + +L+ Y S
Sbjct: 146 PGKVATVQICVDSNYCDVMHIFHSGIPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDYGVS 205
Query: 159 IKE 161
IK+
Sbjct: 206 IKD 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,707,921
Number of Sequences: 539616
Number of extensions: 2112304
Number of successful extensions: 5245
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5208
Number of HSP's gapped (non-prelim): 22
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)