RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8588
         (265 letters)



>d1mixa1 a.11.2.1 (A:195-308) Talin {Chicken (Gallus gallus) [TaxId:
           9031]}
          Length = 114

 Score = 25.6 bits (56), Expect = 3.8
 Identities = 15/64 (23%), Positives = 23/64 (35%)

Query: 80  ELMTDPVGLDILYAQAVSDVHRESIVVHKDTKTILNQLEASGAKKEYVDLARKLKYYGFI 139
               DPV L++LY QA  D+   S  V  D        +       + +   K  +    
Sbjct: 10  VDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELK 69

Query: 140 EFEP 143
           +F P
Sbjct: 70  DFLP 73


>d2al6a1 a.11.2.1 (A:131-253) Focal adhesion kinase 1 {Chicken
           (Gallus gallus) [TaxId: 9031]}
          Length = 123

 Score = 24.7 bits (53), Expect = 8.7
 Identities = 6/38 (15%), Positives = 10/38 (26%)

Query: 80  ELMTDPVGLDILYAQAVSDVHRESIVVHKDTKTILNQL 117
           +   D   L+  Y Q  +D   E          +    
Sbjct: 6   QFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKLGC 43


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0448    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,022,740
Number of extensions: 47067
Number of successful extensions: 100
Number of sequences better than 10.0: 1
Number of HSP's gapped: 100
Number of HSP's successfully gapped: 5
Length of query: 265
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 181
Effective length of database: 1,254,276
Effective search space: 227023956
Effective search space used: 227023956
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.5 bits)