BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8596
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6PH08|ERC2_MOUSE ERC protein 2 OS=Mus musculus GN=Erc2 PE=1 SV=2
Length = 957
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 MQAHHCSSEGALSSLEEAIGDKEKQMNQLREQRDRADQERQEERDLHERDIAEYKLKLHA 60
+Q +++ AL++LEEA+ +KE+ + +L+EQR+R D+ER EE + ++ + K K++A
Sbjct: 572 LQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNA 631
Query: 61 YESEVEELELGKSKAELDKAANEVGRSG 88
++E+ E E S +L + A+ + +G
Sbjct: 632 LQAELTEKE--SSLIDLKEHASSLASAG 657
>sp|Q8K3M6|ERC2_RAT ERC protein 2 OS=Rattus norvegicus GN=Erc2 PE=1 SV=1
Length = 957
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 MQAHHCSSEGALSSLEEAIGDKEKQMNQLREQRDRADQERQEERDLHERDIAEYKLKLHA 60
+Q +++ AL++LEEA+ +KE+ + +L+EQR+R D+ER EE + ++ + K K++A
Sbjct: 572 LQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNA 631
Query: 61 YESEVEELELGKSKAELDKAANEVGRSG 88
++E+ E E S +L + A+ + +G
Sbjct: 632 LQAELTEKE--SSLIDLKEHASSLASAG 657
>sp|O15083|ERC2_HUMAN ERC protein 2 OS=Homo sapiens GN=ERC2 PE=1 SV=3
Length = 957
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 MQAHHCSSEGALSSLEEAIGDKEKQMNQLREQRDRADQERQEERDLHERDIAEYKLKLHA 60
+Q +++ AL++LEEA+ +KE+ + +L+EQR+R D+ER EE + ++ + K K++A
Sbjct: 572 LQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNA 631
Query: 61 YESEVEELELGKSKAELDKAANEVGRSG 88
++E+ E E S +L + A+ + +G
Sbjct: 632 LQAELTEKE--SSLIDLKEHASSLASAG 657
>sp|Q99MI1|RB6I2_MOUSE ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus GN=Erc1
PE=1 SV=1
Length = 1120
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Query: 16 EEAIGDKEKQMNQLREQRDRADQERQEERDLHERDIAEYKLKLHAYESEVEELELGKSKA 75
EEA+ DKE+ + +L+EQRDR ++E+QEE D +++D+ + + K+ + ++ E E S
Sbjct: 619 EEALADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKE--ASLL 676
Query: 76 ELDKAANEVGRSGADWEAARQRLSRLELENERLKHE 111
++ + A+ + SG ++ RL LE+ E+ K E
Sbjct: 677 DIKEHASSLASSGLKKDS---RLKTLEIALEQKKEE 709
>sp|P24733|MYS_ARGIR Myosin heavy chain, striated muscle OS=Argopecten irradians PE=1 SV=1
Length = 1938
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 92 EAARQRLSRLELENERLKHELERSQTTFGRTTLSTSAELDRLQEKYDKTCADLRRAQAEL 151
EAA + S LE RL+ ELE R S + ++++ Q +DKT A+ QA++
Sbjct: 1402 EAANAKCSALEKAKSRLQQELEDMSIEVDRANASVN-QMEKKQRAFDKTTAEW---QAKV 1457
Query: 152 RVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEYERTQGTLSRL- 210
+Q++ E + E + E+YR+KA +E Q + +++ E + + L
Sbjct: 1458 NSLQSELENSQKESRGYS-------AELYRIKASIEEYQDSIGALRRENKNLADEIHDLT 1510
Query: 211 --LSERDKAVLEMDKSKEELE 229
LSE ++ E+DK++ LE
Sbjct: 1511 DQLSEGGRSTHELDKARRRLE 1531
>sp|E9Q1U1|CC171_MOUSE Coiled-coil domain-containing protein 171 OS=Mus musculus
GN=Ccdc171 PE=2 SV=1
Length = 1324
Score = 37.4 bits (85), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 38/222 (17%)
Query: 29 LREQRDRADQERQEERDLHERDIAEYKLKLHAYESEVEELELGKSKAELDKAANEVGR-- 86
LR++ RA +E+ E H +++ Y+ ++ SEVE+ E + + E D A V R
Sbjct: 40 LRKKLHRAKKEKLEMTTKHNAELSSYESQIARLRSEVEKGEALRQRLEYDLA---VARKE 96
Query: 87 SGADWEAARQRLS-------RLELENERLKHELERSQTTFGRTTLSTSAELDRLQEKYDK 139
+G AA +RL+ RL +N L+ + + TF + QEK+ +
Sbjct: 97 AGLGRRAAEERLAEAQRIQERLCAQNSELQGKANEIEKTFQIS-----------QEKWRE 145
Query: 140 TCADLRRAQAEL----RVVQADNERVRSE-------EKTMQEKVEKSQGEVYRLKAKL-E 187
C RR + +L ++Q N+ S +KT+QE +EK + E L++++ E
Sbjct: 146 EC---RRFEHDLEERDNIIQNCNQEYESLMQEKTRLQKTLQEILEKHEQEKTELESRVRE 202
Query: 188 NTQGEMESMKEEYERTQGTLSRLLSERDKAVLEMDKSKEELE 229
GE EE+E + L ++ E+D AV M K E+LE
Sbjct: 203 TALGEFRLQTEEWEAERRELQLIVQEQDSAVQSMQKKVEQLE 244
>sp|Q14789|GOGB1_HUMAN Golgin subfamily B member 1 OS=Homo sapiens GN=GOLGB1 PE=1 SV=2
Length = 3259
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 164 EEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEYERTQGTLSRLLSERDKAVLEMDK 223
E K++QE++ ++G + RL L + + ++ + +E + G L+ L ERDK + EMD+
Sbjct: 1498 ENKSLQEELSLARGTIERLTKSLADVESQVSAQNKEKDTVLGRLALLQEERDKLITEMDR 1557
Query: 224 S 224
S
Sbjct: 1558 S 1558
>sp|Q5R829|ODFP2_PONAB Outer dense fiber protein 2 OS=Pongo abelii GN=ODF2 PE=2 SV=1
Length = 680
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%)
Query: 131 DRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQ 190
++++E D L R AE + +NER+++ M++K+ ++ EV +LKA ++N +
Sbjct: 476 EKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYE 535
Query: 191 GEMESMKEEYERT 203
G +++ K + +T
Sbjct: 536 GMIDNYKSQVMKT 548
>sp|Q5BJF6|ODFP2_HUMAN Outer dense fiber protein 2 OS=Homo sapiens GN=ODF2 PE=1 SV=1
Length = 829
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%)
Query: 131 DRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQ 190
++++E D L R AE + +NER+++ M++K+ ++ EV +LKA ++N +
Sbjct: 481 EKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYE 540
Query: 191 GEMESMKEEYERT 203
G +++ K + +T
Sbjct: 541 GMIDNYKSQVMKT 553
>sp|Q4R8C3|ODFP2_MACFA Outer dense fiber protein 2 OS=Macaca fascicularis GN=ODF2 PE=2
SV=1
Length = 638
Score = 35.0 bits (79), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%)
Query: 131 DRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQ 190
++++E D L R AE + +NER+++ M++K+ ++ EV +LKA ++N +
Sbjct: 462 EKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYE 521
Query: 191 GEMESMKEEYERT 203
G +++ K + +T
Sbjct: 522 GMIDNYKSQVMKT 534
>sp|Q811U3|RB6I2_RAT ELKS/Rab6-interacting/CAST family member 1 OS=Rattus norvegicus
GN=Erc1 PE=1 SV=1
Length = 948
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%)
Query: 16 EEAIGDKEKQMNQLREQRDRADQERQEERDLH 47
EEA+ DKE+ + +L+EQRDR ++E+QEE D +
Sbjct: 591 EEALADKERTIERLKEQRDRDEREKQEEIDTY 622
>sp|Q96KP6|TNIP3_HUMAN TNFAIP3-interacting protein 3 OS=Homo sapiens GN=TNIP3 PE=1 SV=2
Length = 325
Score = 34.3 bits (77), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 10 GALSSLEEAIGDKEKQMNQLREQRDRADQERQEERDLHERDIAEYKLKLHAYESEVEELE 69
++SLE+ I EKQ +L E + DQ+ + ++L+ER +AE K KL A E + E
Sbjct: 31 NLMNSLEQKIRCLEKQRKELLEVNQQWDQQFRSMKELYERKVAELKTKLDAAERFLSTRE 90
Query: 70 LGKSKAELDKAANEVGRSGADWEAARQRLSRLELENERLKHEL----ERSQTTFGRTTLS 125
K + + + + R RL R E E ERL EL E ++ G+ TL+
Sbjct: 91 --KDPHQRQRKDDRQREDDRQRDLTRDRLQREEKEKERLNEELHELKEENKLLKGKNTLA 148
Query: 126 TS------AELDR----LQEKYDKTCA----DLRRAQAELRVVQADNERVRSEEKTMQEK 171
E+ R LQ+ + C+ LR+++ E +E +R+E + ++++
Sbjct: 149 NKEKEHYECEIKRLNKALQDALNIKCSFSEDCLRKSRVEF-----CHEEMRTEMEVLKQQ 203
Query: 172 VEKSQGEVYRLKAKLENTQGEMESMKEEYERTQGTLSRLLSERDKAVLEMDKSKEEL 228
V+ + + + ++ E E E +++ E +Q L+RL S+ +E +K +++L
Sbjct: 204 VQIYEEDFKKERSDRERLNQEKEELQQINETSQSQLNRLNSQIKACQMEKEKLEKQL 260
>sp|Q9UKX3|MYH13_HUMAN Myosin-13 OS=Homo sapiens GN=MYH13 PE=1 SV=2
Length = 1938
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 54/178 (30%)
Query: 100 RLELENERLKHELERSQTTFGRTTLSTSAELDRLQEKYDKTCADLRR----AQAELRVVQ 155
RL+ E E L +LERS T A LD+ Q +DK A+ ++ +QAEL Q
Sbjct: 1424 RLQGEVEDLMRDLERSHTA--------CATLDKKQRNFDKVLAEWKQKLDESQAELEAAQ 1475
Query: 156 ADN---------------------ERVRSEEKTMQEKV-----------------EKSQG 177
++ E +R E K +QE++ EK++
Sbjct: 1476 KESRSLSTELFKMRNAYEEVVDQLETLRRENKNLQEEISDLTEQIAETGKNLQEAEKTKK 1535
Query: 178 EVYR----LKAKLENTQGEMESMKEEYERTQGTLSRLLSERDKAVLEMDKSKEELERS 231
V + L+ LE +G +E + + R Q LS++ SE D+ V+E D+ E+L+R+
Sbjct: 1536 LVEQEKSDLQVALEEVEGSLEHEESKILRVQLELSQVKSELDRKVIEKDEEIEQLKRN 1593
>sp|Q8IUD2|RB6I2_HUMAN ELKS/Rab6-interacting/CAST family member 1 OS=Homo sapiens GN=ERC1
PE=1 SV=1
Length = 1116
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 16 EEAIGDKEKQMNQLREQRDRADQERQEERD 45
EEA+ +KE+ + +L+EQRDR ++E+QEE D
Sbjct: 619 EEALAEKERTIERLKEQRDRDEREKQEEID 648
>sp|P35418|MYSP_TAESO Paramyosin OS=Taenia solium GN=PMY PE=1 SV=2
Length = 863
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 82 NEVGRSGADWEAARQRLSRLELENERLKHELERSQTTFGRTTLSTSAELDRLQEKYDKTC 141
+++ R AD +A+ RL+ E R+ E E TF +T + ++LD L+ D+
Sbjct: 176 DDLQRQMADANSAKSRLAAENFELVRVNQEYEAQVVTFSKTKAALESQLDDLKRAMDEDA 235
Query: 142 ADLRRAQAELRVVQADNERVRS-------EEKTMQEKVEKSQGEVYRLKAKLENTQGEME 194
+ Q +L +Q D + +++ ++ +V K ++ LK +LE E+
Sbjct: 236 RNRLSLQTQLSSLQMDYDNLQARYEEEAEAAGNLRNQVAKFNADMAALKTRLER---ELM 292
Query: 195 SMKEEYERTQGTLSRLLSE 213
+ EE+E + L+ ++E
Sbjct: 293 AKTEEFEELKRKLTVRITE 311
>sp|Q8TDM6|DLG5_HUMAN Disks large homolog 5 OS=Homo sapiens GN=DLG5 PE=1 SV=4
Length = 1919
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 90 DWEAARQRLS-RLELEN---ERLKHELERSQTTFGRTTLSTSAELDRLQEKYDKTCA-DL 144
D++A R+R S ++ + N RL+ E +Q +T + T +Q ++ CA L
Sbjct: 316 DYDALRKRYSEKVAIHNADLSRLEQLGEENQRLLKQTEMLTQQRDTAIQLQHQ--CALSL 373
Query: 145 RRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEYERTQ 204
RR +A + + + ++ K +Q ++E Q E+ L+ T E E +EE +
Sbjct: 374 RRFEA----IHHELNKATAQNKDLQWEMELLQSELTELRTTQVKTAKESEKYREERDAVY 429
Query: 205 GTLSRLLSERDKAVLEMDKSKEELERSQATL 235
++SERD+ + E+DK + E+E +++ L
Sbjct: 430 SEYKLIMSERDQVISELDKLQTEVELAESKL 460
>sp|Q6TFL3|CC171_HUMAN Coiled-coil domain-containing protein 171 OS=Homo sapiens
GN=CCDC171 PE=2 SV=1
Length = 1326
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 27 NQLREQRDRADQERQEERDLHERDIAEYKLKLHAYESEVEELELGKSKAELDKAANEVGR 86
+ LR++ A +E+ E H ++A Y+ ++ SEVE+ E + E D A V R
Sbjct: 36 DNLRKKLHWAKKEKLEITTKHNAELASYESQIAKLRSEVEKGEALRQSLEYDLA---VAR 92
Query: 87 --SGADWEAARQRLSRLELENERLKHELERSQTTFGRTTLSTSAELDRLQEKYDKTCADL 144
+G AA +RL+ E R++ +L + T T Q+K+ + C
Sbjct: 93 KEAGLGRRAAEERLA----EAHRIQEKLCAQNSELQAKTNETEKAFQTSQQKWKEEC--- 145
Query: 145 RRAQAEL----RVVQADN--------ERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGE 192
RR + +L ++Q N E+ R EKT+QE +EK Q E +++ + T E
Sbjct: 146 RRFEHDLEERDNMIQNCNREYDLLMKEKSRL-EKTLQEALEKHQREKNEMESHIRETALE 204
Query: 193 MESMKEE-YERTQGTLSRLLSERDKAVLEMDKSKEELE 229
++EE +E + L ++ E+D AV M K E+LE
Sbjct: 205 EFRLQEEQWEAERRELQFIVQEQDTAVQNMHKKVEKLE 242
>sp|Q8T305|MYSP_TAESA Paramyosin OS=Taenia saginata GN=PMY PE=2 SV=1
Length = 863
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 82 NEVGRSGADWEAARQRLSRLELENERLKHELERSQTTFGRTTLSTSAELDRLQEKYDKTC 141
+++ R AD +A+ RL+ E R E E TF +T + ++LD L+ D+
Sbjct: 176 DDLQRQMADANSAKSRLAAENFELVRANQEYEAQVVTFSKTKAALESQLDDLKRAMDEDA 235
Query: 142 ADLRRAQAELRVVQADNERVRS-------EEKTMQEKVEKSQGEVYRLKAKLENTQGEME 194
+ Q +L +Q D + +++ ++ +V K ++ LK +LE E+
Sbjct: 236 RNRLNLQTQLSSLQMDYDNLQARYEEEAEAAGNLRNQVAKFNADMAALKTRLER---ELM 292
Query: 195 SMKEEYERTQGTLSRLLSE 213
+ EE+E + L+ ++E
Sbjct: 293 AKTEEFEELKRKLTVRITE 311
>sp|Q15075|EEA1_HUMAN Early endosome antigen 1 OS=Homo sapiens GN=EEA1 PE=1 SV=2
Length = 1411
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 24/235 (10%)
Query: 12 LSSLEEAIGDKEKQMNQLREQRDRAD---QERQEERDLHERDIAEYKLKLHAYESEVEEL 68
L + + A+ DK++++N++ Q D+ Q++QE E + EYK K + E + EEL
Sbjct: 669 LDTAQNALQDKQQELNKITTQLDQVTAKLQDKQEHCSQLESHLKEYKEKYLSLEQKTEEL 728
Query: 69 ELGKSKAELD----KAANEVGRSGADWEAARQRLSRLELENERLKHELERSQTTFGRTTL 124
E K E D KA+ E + + LEL L +LE +
Sbjct: 729 EGQIKKLEADSLEVKASKEQALQDLQQQRQLN--TDLELRATELSKQLEMEKEIVS---- 782
Query: 125 STSAELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQE----KVEKSQGEVY 180
ST +L + E + L + + E ++++ D E + E K E +++ + E+
Sbjct: 783 STRLDLQKKSEALESIKQKLTKQEEEKKILKQDFETLSQETKIQHEELNNRIQTTVTELQ 842
Query: 181 RLKAKLENTQGEMESMKEEYERTQGTLSRLLSERDK-------AVLEMDKSKEEL 228
++K + E E+ ++K++ + +L SE +K A+L+++K+ +EL
Sbjct: 843 KVKMEKEALMTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKEL 897
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.122 0.311
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,555,747
Number of Sequences: 539616
Number of extensions: 3109532
Number of successful extensions: 34201
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 2580
Number of HSP's that attempted gapping in prelim test: 20259
Number of HSP's gapped (non-prelim): 10839
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 59 (27.3 bits)