BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy860
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O95477|ABCA1_HUMAN ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1
PE=1 SV=3
Length = 2261
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
Query: 67 QNSLLMTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWI 126
+NS+L +NI + Q +GYCPQF+ I E LT +E +E F+ LRG+P + G + ++ I
Sbjct: 1974 KNSIL-SNIHEVHQ---NMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAI 2029
Query: 127 DLLGLTEYRHRVSGRYSGGNKRKLSTAMALIG 158
LGL +Y + +G YSGGNKRKLSTAMALIG
Sbjct: 2030 RKLGLVKYGEKYAGNYSGGNKRKLSTAMALIG 2061
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLG 55
+GYCPQF+ I E LT +E +E F+ LRG+P + G + ++ I LG
Sbjct: 1988 MGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLG 2033
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRV-SGRYS 143
+G CPQ N + + LT +E + ++ L+G+ ++ +GL + + + + S
Sbjct: 975 LGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPSSKLKSKTSQLS 1034
Query: 144 GGNKRKLSTAMALIG 158
GG +RKLS A+A +G
Sbjct: 1035 GGMQRKLSVALAFVG 1049
>sp|P41233|ABCA1_MOUSE ATP-binding cassette sub-family A member 1 OS=Mus musculus GN=Abca1
PE=1 SV=4
Length = 2261
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Query: 67 QNSLLMTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWI 126
+NS+L +NI + Q +GYCPQF+ I E LT +E +E F+ LRG+P + G + ++ I
Sbjct: 1974 KNSIL-SNIHEVHQ---NMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAI 2029
Query: 127 DLLGLTEYRHRVSGRYSGGNKRKLSTAMALIG 158
LGL +Y + + YSGGNKRKLSTAMALIG
Sbjct: 2030 RKLGLVKYGEKYASNYSGGNKRKLSTAMALIG 2061
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLG 55
+GYCPQF+ I E LT +E +E F+ LRG+P + G + ++ I LG
Sbjct: 1988 MGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLG 2033
Score = 37.7 bits (86), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRV-SGRYS 143
+G CPQ N + + LT +E + ++ L+G+ ++ +GL + + + + S
Sbjct: 975 LGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPPSKLKSKTSQLS 1034
Query: 144 GGNKRKLSTAMALIG 158
GG +RKLS A+A +G
Sbjct: 1035 GGMQRKLSVALAFVG 1049
>sp|P41234|ABCA2_MOUSE ATP-binding cassette sub-family A member 2 OS=Mus musculus GN=Abca2
PE=1 SV=4
Length = 2434
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 56/81 (69%)
Query: 78 LFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHR 137
L Q +GYCPQF+ + + LTA+E L+ ++ LRGIP ++ + ++ L LT+Y +
Sbjct: 2123 LLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVKWALEKLELTKYADK 2182
Query: 138 VSGRYSGGNKRKLSTAMALIG 158
+G YSGGNKRKLSTA+ALIG
Sbjct: 2183 PAGTYSGGNKRKLSTAIALIG 2203
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+G CPQ N + + LT +E L +S L+ + + D I+ L L+ RH + SG
Sbjct: 1066 LGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMIEDLELSNKRHSLVQTLSG 1125
Query: 145 GNKRKLSTAMALIG 158
G KRKLS A+A +G
Sbjct: 1126 GMKRKLSVAIAFVG 1139
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 3 LFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
L Q +GYCPQF+ + + LTA+E L+ ++ LRGIP ++ + ++ L
Sbjct: 2123 LLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVKWALEKL 2174
>sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette transporter OS=Homo sapiens
GN=ABCA4 PE=1 SV=3
Length = 2273
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 30 ECFSALRGIPGVKSGPIIDYWIDLLGSAIRFSPFQAAQNSLLMTNIMHLFQYLSGIGYCP 89
ECF G+ GV + L G S ++TNI + Q +GYCP
Sbjct: 1966 ECF----GLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQ---NMGYCP 2018
Query: 90 QFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGGNKRK 149
QF+ I+E LT +E L ++ LRG+P + + ++ I LGLT Y ++G YSGGNKRK
Sbjct: 2019 QFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSGGNKRK 2078
Query: 150 LSTAMALIG 158
LSTA+ALIG
Sbjct: 2079 LSTAIALIG 2087
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 84 GIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYS 143
+G CPQ N + HLT E + ++ L+G ++ ++ ++ GL R+ + S
Sbjct: 1004 SLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTGLHHKRNEEAQDLS 1063
Query: 144 GGNKRKLSTAMALIGDRDDGFQKLPFSSQNLYN 176
GG +RKLS A+A +GD P S + Y+
Sbjct: 1064 GGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYS 1096
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGSAI 58
+GYCPQF+ I+E LT +E L ++ LRG+P + + ++ I LG +
Sbjct: 2014 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTV 2062
>sp|Q9ESR9|ABCA2_RAT ATP-binding cassette sub-family A member 2 OS=Rattus norvegicus
GN=Abca2 PE=1 SV=1
Length = 2434
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 78 LFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHR 137
L Q +GYCPQF+ + + LTA+E L+ ++ LRGIP ++ + ++ L LT+ +
Sbjct: 2123 LLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVRWALEKLELTKCADK 2182
Query: 138 VSGRYSGGNKRKLSTAMALIG 158
+G YSGGNKRKLSTA+ALIG
Sbjct: 2183 PAGSYSGGNKRKLSTAIALIG 2203
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+G CPQ N + + LT +E L +S L+ + + +D I+ L L+ RH + SG
Sbjct: 1066 LGMCPQHNVLFDQLTVEEHLWFYSRLKSMAQEEIRKEMDKMIEDLELSNKRHSLVQTLSG 1125
Query: 145 GNKRKLSTAMALIG 158
G KRKLS A+A +G
Sbjct: 1126 GMKRKLSVAIAFVG 1139
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 3 LFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
L Q +GYCPQF+ + + LTA+E L+ ++ LRGIP ++ + ++ L
Sbjct: 2123 LLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVRWALEKL 2174
>sp|O35600|ABCA4_MOUSE Retinal-specific ATP-binding cassette transporter OS=Mus musculus
GN=Abca4 PE=2 SV=1
Length = 2310
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 30 ECFSALRGIPGVKSGPIIDYWIDLLGSAIRFSPFQAAQNSLLMTNIMHLFQYLSGIGYCP 89
ECF G+ GV + L G S ++T+I + Q +GYCP
Sbjct: 1965 ECF----GLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTSISDVHQ---NMGYCP 2017
Query: 90 QFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGGNKRK 149
QF+ I++ LT +E L ++ LRG+P + + ++ I LGL+ Y R++G YSGGNKRK
Sbjct: 2018 QFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQSLGLSLYADRLAGTYSGGNKRK 2077
Query: 150 LSTAMALIG 158
LSTA+AL G
Sbjct: 2078 LSTAIALTG 2086
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 84 GIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYS 143
+G CPQ N + HLT E + ++ L+G ++ ++ ++ GL R+ + S
Sbjct: 1004 SLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLS 1063
Query: 144 GGNKRKLSTAMALIGD 159
GG +RKLS A+A +GD
Sbjct: 1064 GGMQRKLSVAIAFVGD 1079
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGSAI 58
+GYCPQF+ I++ LT +E L ++ LRG+P + + ++ I LG ++
Sbjct: 2013 MGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQSLGLSL 2061
>sp|Q9BZC7|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2
PE=1 SV=3
Length = 2435
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 75 IMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEY 134
+ L Q +GYCPQ + + + LTA+E L+ ++ LRGI ++ + ++ L LT+Y
Sbjct: 2119 LKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKWALEKLELTKY 2178
Query: 135 RHRVSGRYSGGNKRKLSTAMALIG 158
+ +G YSGGNKRKLSTA+ALIG
Sbjct: 2179 ADKPAGTYSGGNKRKLSTAIALIG 2202
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+G CPQ N + + LT +E L +S L+ + + +D I+ L L+ RH + SG
Sbjct: 1066 LGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLELSNKRHSLVQTLSG 1125
Query: 145 GNKRKLSTAMALIG 158
G KRKLS A+A +G
Sbjct: 1126 GMKRKLSVAIAFVG 1139
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 2 HLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
L Q +GYCPQ + + + LTA+E L+ ++ LRGI ++ + ++ L
Sbjct: 2121 ELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKWALEKL 2173
>sp|Q8IZY2|ABCA7_HUMAN ATP-binding cassette sub-family A member 7 OS=Homo sapiens GN=ABCA7
PE=1 SV=3
Length = 2146
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GYCPQ + I E LT +E LE + LRG+P + + LGL+ Y R +G YSG
Sbjct: 1869 MGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSGLARLGLSWYADRPAGTYSG 1928
Query: 145 GNKRKLSTAMALIGD 159
GNKRKL+TA+AL+GD
Sbjct: 1929 GNKRKLATALALVGD 1943
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+G CPQ+N + + LT E + + L+G+ GP D + +GL + + SG
Sbjct: 883 LGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDRLLQDVGLVSKQSVQTRHLSG 942
Query: 145 GNKRKLSTAMALIG 158
G +RKLS A+A +G
Sbjct: 943 GMQRKLSVAIAFVG 956
Score = 38.5 bits (88), Expect = 0.021, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIP 39
+GYCPQ + I E LT +E LE + LRG+P
Sbjct: 1869 MGYCPQSDAIFELLTGREHLELLARLRGVP 1898
Score = 29.6 bits (65), Expect = 9.5, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLG 55
+G CPQ+N + + LT E + + L+G+ GP D + +G
Sbjct: 883 LGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDRLLQDVG 928
>sp|Q7TNJ2|ABCA7_RAT ATP-binding cassette sub-family A member 7 OS=Rattus norvegicus
GN=Abca7 PE=1 SV=1
Length = 2170
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GYCPQ + I + LT +E LE F+ LRG+P + + LGL Y R +G YSG
Sbjct: 1894 MGYCPQSDAIFDLLTGREHLELFARLRGVPEAQVAQTALSGLVRLGLPSYADRPAGTYSG 1953
Query: 145 GNKRKLSTAMALIGD 159
GNKRKL+TA+AL+GD
Sbjct: 1954 GNKRKLATALALVGD 1968
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+G CPQ+N + + LT +E + + L+G+ ++ I +GL R + SG
Sbjct: 881 LGICPQYNVLFDMLTVEEHVWFYGRLKGVSAAAIDSEQEHLIRDVGLIPKRDTQTRHLSG 940
Query: 145 GNKRKLSTAMALIG 158
G +RKLS A+A +G
Sbjct: 941 GMQRKLSVAIAFVG 954
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIP 39
+GYCPQ + I + LT +E LE F+ LRG+P
Sbjct: 1894 MGYCPQSDAIFDLLTGREHLELFARLRGVP 1923
>sp|Q91V24|ABCA7_MOUSE ATP-binding cassette sub-family A member 7 OS=Mus musculus GN=Abca7
PE=1 SV=1
Length = 2159
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GYCPQ + I + LT +E LE F+ LRG+P + + LGL Y R +G YSG
Sbjct: 1883 MGYCPQSDAIFDLLTGREHLELFARLRGVPEAQVAQTALSGLVRLGLPSYADRPAGTYSG 1942
Query: 145 GNKRKLSTAMALIGD 159
GNKRKL+TA+AL+GD
Sbjct: 1943 GNKRKLATALALVGD 1957
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+G CPQ+N + + LT +E + + L+G+ GP + I +GLT R + SG
Sbjct: 880 LGICPQYNVLFDMLTVEEHVWFYGRLKGVSAAAMGPERERLIRDVGLTLKRDTQTRHLSG 939
Query: 145 GNKRKLSTAMALIG 158
G +RKLS A+A +G
Sbjct: 940 GMQRKLSVAIAFVG 953
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIP 39
+GYCPQ + I + LT +E LE F+ LRG+P
Sbjct: 1883 MGYCPQSDAIFDLLTGREHLELFARLRGVP 1912
Score = 31.6 bits (70), Expect = 3.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGP 45
+G CPQ+N + + LT +E + + L+G+ GP
Sbjct: 880 LGICPQYNVLFDMLTVEEHVWFYGRLKGVSAAAMGP 915
>sp|Q99758|ABCA3_HUMAN ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3
PE=1 SV=2
Length = 1704
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
IGYCPQF+ + +H+T +EML ++ LRGIP G ++ + L L + +++ YSG
Sbjct: 1458 IGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTLRGLLLEPHANKLVRTYSG 1517
Query: 145 GNKRKLSTAMALIGD 159
GNKRKLST +ALIG+
Sbjct: 1518 GNKRKLSTGIALIGE 1532
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIID 48
IGYCPQF+ + +H+T +EML ++ LRGIP G ++
Sbjct: 1458 IGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVE 1496
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 78 LFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHR 137
+ Q +G CPQ + + ++LT E L ++ L+G+ K + + ++GL + +
Sbjct: 601 MVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEEVKQMLHIIGLEDKWNS 660
Query: 138 VSGRYSGGNKRKLSTAMALIG 158
S SGG +RKLS +ALI
Sbjct: 661 RSRFLSGGMRRKLSIGIALIA 681
>sp|Q8R420|ABCA3_MOUSE ATP-binding cassette sub-family A member 3 OS=Mus musculus GN=Abca3
PE=2 SV=3
Length = 1704
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GYCPQF+ + +H+T +EML ++ LRGIP ++ + L L + +++ YSG
Sbjct: 1458 MGYCPQFDALLDHMTGREMLVMYARLRGIPERLINACVENTLRGLLLEPHANKLVKTYSG 1517
Query: 145 GNKRKLSTAMALIGD 159
GNKRKLST +ALIG+
Sbjct: 1518 GNKRKLSTGIALIGE 1532
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 80 QYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVS 139
Q +G CPQ + + ++LT E L ++ L+G+ K + + +L L + R S
Sbjct: 603 QIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSLQKCPEEVKQMLHILSLEDKRDLRS 662
Query: 140 GRYSGGNKRKLSTAMALIG 158
SGG KRKLS +ALI
Sbjct: 663 KFLSGGMKRKLSIGIALIA 681
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIP 39
+GYCPQF+ + +H+T +EML ++ LRGIP
Sbjct: 1458 MGYCPQFDALLDHMTGREMLVMYARLRGIP 1487
>sp|Q8T6J2|ABCA5_DICDI ABC transporter A family member 5 OS=Dictyostelium discoideum
GN=abcA5 PE=3 SV=1
Length = 1662
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%)
Query: 80 QYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVS 139
Q L G+ CPQF+ + LTA+E L + A++G+P K +++ +I ++ L + + +
Sbjct: 1397 QALRGVSVCPQFDALITLLTAREQLSLYCAIKGVPDDKISLVVEAFIKMMDLGKIANSNT 1456
Query: 140 GRYSGGNKRKLSTAMALIGD 159
G YSGGNKRK+S ++A++G+
Sbjct: 1457 GGYSGGNKRKVSLSIAMLGN 1476
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 5 QYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
Q L G+ CPQF+ + LTA+E L + A++G+P K +++ +I ++
Sbjct: 1397 QALRGVSVCPQFDALITLLTAREQLSLYCAIKGVPDDKISLVVEAFIKMM 1446
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 86 GYCPQFNGINEHLTAQEMLECFSALRGIPG---VKSGPIIDYWIDLLGLTEYRHRVSGRY 142
G C Q + I LT E LE +++L+GI +KS + + + L E H +G
Sbjct: 584 GVCLQTDIIWNQLTVLEHLEIYASLKGITNKKQIKSESL--KMANEIDLGEKLHTPAGSL 641
Query: 143 SGGNKRKLSTAMALIG 158
SGG KRKL +A IG
Sbjct: 642 SGGQKRKLCLGIAFIG 657
>sp|Q84M24|AB1A_ARATH ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1
PE=2 SV=2
Length = 1882
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
IGYCPQF+ + E+LT +E LE ++ ++G+ + ++ + L ++ H+ S SG
Sbjct: 1533 IGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVTEKLVEFDLLKHSHKPSFTLSG 1592
Query: 145 GNKRKLSTAMALIGD 159
GNKRKLS A+A+IGD
Sbjct: 1593 GNKRKLSVAIAMIGD 1607
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 6 YLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGSAIRFSPFQA 65
Y S G C N + L ++L +L G G I + LL
Sbjct: 558 YASRRGNCCAVNSLQLTLYENQIL----SLLGHNGAGKSTTISMLVGLLPPT-------- 605
Query: 66 AQNSLLMTN--IMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIID 123
+ ++L++ N I ++ + +G CPQ + + LT +E LE F+ L+ GV+ G +
Sbjct: 606 SGDALILGNSIITNMDEIRKELGVCPQHDILFPELTVREHLEMFAVLK---GVEEGSLKS 662
Query: 124 YWIDL---LGLTEYRHRVSGRYSGGNKRKLSTAMALIGDRDDGFQKLPFSSQNLYN 176
+D+ +GL++ + + SGG KRKLS +ALIG+ P S + Y+
Sbjct: 663 TVVDMAEEVGLSDKINTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYS 718
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 8/43 (18%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWID 52
IGYCPQF+ + E+LT +E LE ++ ++G ++D+ ID
Sbjct: 1533 IGYCPQFDALFEYLTVKEHLELYARIKG--------VVDHRID 1567
>sp|Q8T6J5|ABCA2_DICDI ABC transporter A family member 2 OS=Dictyostelium discoideum
GN=abcA2 PE=3 SV=1
Length = 1621
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 80 QYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVS 139
Q L G CPQF+ + L+A+E L + A++G+P K +++ +I ++ L + +
Sbjct: 1368 QALRSNGLCPQFDALITLLSAREQLTLYCAIKGVPEDKVKEVVEAFIKMMDLGAIANSNT 1427
Query: 140 GRYSGGNKRKLSTAMALIGD 159
G YSGGNKRK S ++A++G+
Sbjct: 1428 GGYSGGNKRKTSLSIAMLGN 1447
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+G CPQ + I + LT + L+ +++L+G+ + + + L E H +G SG
Sbjct: 562 LGVCPQTDIIWQQLTVLDHLKIYASLKGVSPSEIQREAEKMAVEVDLGEKIHSQAGSLSG 621
Query: 145 GNKRKLSTAMALIGDRD 161
G KRKL +A IG D
Sbjct: 622 GQKRKLCLGIAFIGRSD 638
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 5 QYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
Q L G CPQF+ + L+A+E L + A++G+P K +++ +I ++
Sbjct: 1368 QALRSNGLCPQFDALITLLSAREQLTLYCAIKGVPEDKVKEVVEAFIKMM 1417
>sp|Q84K47|AB2A_ARATH ABC transporter A family member 2 OS=Arabidopsis thaliana GN=ABCA2
PE=2 SV=1
Length = 983
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Query: 67 QNSLLMTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWI 126
++S+ M+NI + IG CPQF+ + + L+ +E L+ F++++G+P +++ +
Sbjct: 596 RSSVGMSNIRKM------IGVCPQFDILWDALSGEEHLKLFASIKGLPPSSINSMVEKSL 649
Query: 127 DLLGLTEYRHRVSGRYSGGNKRKLSTAMALIGD 159
+ LTE +G YSGG KR+LS A++LIGD
Sbjct: 650 AEVKLTEAGKIRAGSYSGGMKRRLSVAVSLIGD 682
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIP 39
IG CPQF+ + + L+ +E L+ F++++G+P
Sbjct: 608 IGVCPQFDILWDALSGEEHLKLFASIKGLP 637
>sp|Q5SSE9|ABCAD_MOUSE ATP-binding cassette sub-family A member 13 OS=Mus musculus GN=Abca13
PE=2 SV=1
Length = 5034
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
IGYCPQ + ++E LT E L+ + LRGIP + + L L + + YSG
Sbjct: 4775 IGYCPQQDALDELLTGWEHLQYYCRLRGIPKQYIPEVAADLVRRLHLESHVDKPVATYSG 4834
Query: 145 GNKRKLSTAMALIGDRD 161
G +RKLSTA+AL+G D
Sbjct: 4835 GTRRKLSTALALVGKPD 4851
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPI---IDYWIDLLGLTEYRHRVSGR 141
+G CPQ + + ++LT +E L F++++ P + + ++ +D + LT+++H+ +G
Sbjct: 3885 LGVCPQQDVLLDNLTVREHLMLFASIKA-PWWTTKELQQQVNKTLDEVELTQHQHKPAGV 3943
Query: 142 YSGGNKRKLSTAMALIG 158
SGG KRKLS +A +G
Sbjct: 3944 LSGGMKRKLSIGIAFMG 3960
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIP 39
IGYCPQ + ++E LT E L+ + LRGIP
Sbjct: 4775 IGYCPQQDALDELLTGWEHLQYYCRLRGIP 4804
>sp|Q86UQ4|ABCAD_HUMAN ATP-binding cassette sub-family A member 13 OS=Homo sapiens GN=ABCA13
PE=2 SV=3
Length = 5058
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
IGYCPQ + ++E LT E L + +LRGIP + I L L + + YSG
Sbjct: 4800 IGYCPQQDALDELLTGWEHLYYYCSLRGIPRQCIPEVAGDLIRRLHLEAHADKPVATYSG 4859
Query: 145 GNKRKLSTAMALIGDRD 161
G KRKLSTA+AL+G D
Sbjct: 4860 GTKRKLSTALALVGKPD 4876
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSG--PIIDYWIDLLGLTEYRHRVSGRY 142
+G CPQ + + ++LT +E L F++++ K ++ + + LT+++H+ +
Sbjct: 3917 LGVCPQQDILLDNLTVREHLLLFASIKAPQWTKKELHQQVNQTLQDVDLTQHQHKQTRAL 3976
Query: 143 SGGNKRKLSTAMALIG 158
SGG KRKLS +A +G
Sbjct: 3977 SGGLKRKLSLGIAFMG 3992
Score = 36.6 bits (83), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIP 39
IGYCPQ + ++E LT E L + +LRGIP
Sbjct: 4800 IGYCPQQDALDELLTGWEHLYYYCSLRGIP 4829
>sp|Q9FLT5|AB9A_ARATH ABC transporter A family member 9 OS=Arabidopsis thaliana GN=ABCA9
PE=3 SV=1
Length = 950
Score = 60.1 bits (144), Expect = 8e-09, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 19/127 (14%)
Query: 33 SALRGIPGVKSGPIIDYWIDLLGSAIRFSPFQAAQNSLLMTNIMHLFQYLSGIGYCPQFN 92
S L GI V G Y G++IR +S+ M+NI + IG CPQF+
Sbjct: 577 SCLTGINPVTGGDAKIY-----GNSIR--------SSVGMSNIRKM------IGVCPQFD 617
Query: 93 GINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGGNKRKLST 152
+ + L+++E L F++++G+P I + + + LT +G YSGG KR+LS
Sbjct: 618 ILWDALSSEEHLHLFASIKGLPPSSIKSIAEKLLVDVKLTGSAKIRAGSYSGGMKRRLSV 677
Query: 153 AMALIGD 159
A+ALIGD
Sbjct: 678 AIALIGD 684
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIP 39
IG CPQF+ + + L+++E L F++++G+P
Sbjct: 610 IGVCPQFDILWDALSSEEHLHLFASIKGLP 639
>sp|Q86UK0|ABCAC_HUMAN ATP-binding cassette sub-family A member 12 OS=Homo sapiens GN=ABCA12
PE=1 SV=3
Length = 2595
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 77 HLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRH 136
H+ + S +GYCPQ + +++ +T +E L ++ + GIP + + L L ++
Sbjct: 2325 HVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARVHGIPEKDIKETVHKLLRRLHLMPFKD 2384
Query: 137 RVSGRYSGGNKRKLSTAMALIG 158
R + S G KRKLSTA+ALIG
Sbjct: 2385 RATSMCSYGTKRKLSTALALIG 2406
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 84 GIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPI---IDYWIDLLGLTEYRHRVSG 140
+G C Q + + +LT +E L + +++ +P + + + GL +RH+ G
Sbjct: 1419 NMGVCMQHDVLFSYLTTKEHLLLYGSIK-VPHWTKKQLHEEVKRTLKDTGLYSHRHKRVG 1477
Query: 141 RYSGGNKRKLSTAMALIG 158
SGG KRKLS ++ALIG
Sbjct: 1478 TLSGGMKRKLSISIALIG 1495
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 2 HLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIP 39
H+ + S +GYCPQ + +++ +T +E L ++ + GIP
Sbjct: 2325 HVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARVHGIP 2362
>sp|Q9FKF2|AB11A_ARATH ABC transporter A family member 11 OS=Arabidopsis thaliana
GN=ABCA11 PE=3 SV=1
Length = 953
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 19/127 (14%)
Query: 33 SALRGIPGVKSGPIIDYWIDLLGSAIRFSPFQAAQNSLLMTNIMHLFQYLSGIGYCPQFN 92
S L GI V G + Y G +IR +S+ ++NI + IG CPQF+
Sbjct: 576 SCLTGINPVTGGDALIY-----GDSIR--------SSVGISNIRKM------IGVCPQFD 616
Query: 93 GINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGGNKRKLST 152
+ + L++++ L F++++G+P + + + LT +G YSGG KR+LS
Sbjct: 617 ILWDALSSEQHLHLFASIKGLPPASIKSTAEKLLADVKLTGAAKVRAGSYSGGMKRRLSV 676
Query: 153 AMALIGD 159
A+ALIGD
Sbjct: 677 AVALIGD 683
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 23/30 (76%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIP 39
IG CPQF+ + + L++++ L F++++G+P
Sbjct: 609 IGVCPQFDILWDALSSEQHLHLFASIKGLP 638
>sp|Q555Z5|ABCA4_DICDI ABC transporter A family member 4 OS=Dictyostelium discoideum
GN=abcA4 PE=3 SV=1
Length = 1615
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 82 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGR 141
L+ IGYC QF+ + L+A+E LE + ++G+ K ++ +I ++ L + +
Sbjct: 1370 LTSIGYCFQFDALIGLLSAREQLELYCRIKGVDESKIKDTVNAFIQMMDLESISNSNTSG 1429
Query: 142 YSGGNKRKLSTAMALIG 158
YSGGNKRK+S ++A IG
Sbjct: 1430 YSGGNKRKVSLSIACIG 1446
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDL-LGLTEYRHRVSGRYS 143
+G CPQ + I E LT E LE ++AL+G + I L +GL E + +G S
Sbjct: 570 LGVCPQSDIIWEQLTVMEHLEFYAALKGFTNSNQRKVEATKIALEVGLGEKLNAPAGTLS 629
Query: 144 GGNKRKLSTAMALIGDRDD 162
GG KRKL A+A IG D
Sbjct: 630 GGQKRKLCLAIAFIGPNSD 648
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 7 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
L+ IGYC QF+ + L+A+E LE + ++G+ K ++ +I ++
Sbjct: 1370 LTSIGYCFQFDALIGLLSAREQLELYCRIKGVDESKIKDTVNAFIQMM 1417
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRG 37
+G CPQ + I E LT E LE ++AL+G
Sbjct: 570 LGVCPQSDIIWEQLTVMEHLEFYAALKG 597
>sp|Q552P3|ABCAB_DICDI ABC transporter A family member 11 OS=Dictyostelium discoideum
GN=abcA11 PE=3 SV=1
Length = 834
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 84 GIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSG--PIIDYWIDLLGLTEYRHRVSGR 141
IG C Q + + E+LT E L FS L+ I KS ID++I+ + ++++ S
Sbjct: 535 SIGSCAQNDILFENLTIYEHLYLFSRLKSITTTKSELEDEIDFYINKFSIQSFKNKKSSD 594
Query: 142 YSGGNKRKLSTAMALIGD 159
SGG KRKLS A LIGD
Sbjct: 595 LSGGTKRKLSVACCLIGD 612
>sp|Q8T5Z7|ABCA1_DICDI ABC transporter A family member 1 OS=Dictyostelium discoideum
GN=abcA1 PE=2 SV=1
Length = 877
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 88 CPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGGNK 147
PQ + + +TA+E L+ FS L+GIP + I +D + L++ + + YSGG K
Sbjct: 636 VPQHDILWAEMTAREHLQLFSELKGIPAQERESQIQKVLDQVRLSKISNNLISTYSGGMK 695
Query: 148 RKLSTAMALIGDRDDGFQKLP 168
R+LS A+A IGD F P
Sbjct: 696 RRLSVAIACIGDPKIIFMDEP 716
>sp|Q8WWZ4|ABCAA_HUMAN ATP-binding cassette sub-family A member 10 OS=Homo sapiens
GN=ABCA10 PE=2 SV=3
Length = 1543
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 72 MTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGL 131
++ I + + IG+CPQFN + LT +E L F+ ++GI + + I L +
Sbjct: 458 LSEITDMEEIRKNIGFCPQFNFQFDFLTVRENLRVFAKIKGIQPKEVEQEVKRIIMELDM 517
Query: 132 TEYRHRVSGRYSGGNKRKLSTAMALIGD 159
+ ++ + SGG KRKL+ +A++GD
Sbjct: 518 QSIQDIIAKKLSGGQKRKLTLGIAILGD 545
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 82 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGR 141
L +GYCPQ N + LT +E LE ++A++G+ + I ++ L L E
Sbjct: 1280 LKFLGYCPQENSLWPKLTMKEHLELYAAVKGLGKEDAALSISRLVEALKLQEQLKAPVKT 1339
Query: 142 YSGGNKRKLSTAMALIGDRDDGFQKLPFSSQN 173
S G KRKL ++++G+ PF+ +
Sbjct: 1340 LSEGIKRKLCFVLSILGNPSVVLLDEPFTGMD 1371
Score = 34.3 bits (77), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 8 SGIGYCPQFNGINEHLTAQEMLECFSALRGI 38
IG+CPQFN + LT +E L F+ ++GI
Sbjct: 469 KNIGFCPQFNFQFDFLTVRENLRVFAKIKGI 499
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 7 LSGIGYCPQFNGINEHLTAQEMLECFSALRGI 38
L +GYCPQ N + LT +E LE ++A++G+
Sbjct: 1280 LKFLGYCPQENSLWPKLTMKEHLELYAAVKGL 1311
>sp|P34358|CED7_CAEEL ABC transporter ced-7 OS=Caenorhabditis elegans GN=ced-7 PE=1 SV=6
Length = 1704
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 15 QFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGSAIRFSPFQAAQNSLLMTN 74
+F +NE A + ECF G+ GV + L G + A + M
Sbjct: 1390 RFTAVNELCLAVDQKECF----GLLGVNGAGKTTTFNILTGQSF-------ASSGEAMIG 1438
Query: 75 IMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEY 134
+ + +S IGYCPQF+ + LT +E LE + + G K+ + ++ +G+ +
Sbjct: 1439 GRDVTELIS-IGYCPQFDALMLDLTGRESLEILAQMHGFENYKAKA--ELILECVGMIAH 1495
Query: 135 RHRVSGRYSGGNKRKLSTAMALIG 158
++ YSGG KRK+S +AL+
Sbjct: 1496 ADKLVRFYSGGQKRKISVGVALLA 1519
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
IG CPQ+N + + LT E L+ L+G + + + L + + SG
Sbjct: 622 IGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSG 681
Query: 145 GNKRKLSTAMALIGDRD 161
G KRKL MALIGD +
Sbjct: 682 GMKRKLCVCMALIGDSE 698
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 7 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKS 43
L IGYCPQF+ + LT +E LE + + G K+
Sbjct: 1445 LISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKA 1481
>sp|Q8T6J1|ABCA6_DICDI ABC transporter A family member 6 OS=Dictyostelium discoideum
GN=abcA6 PE=3 SV=1
Length = 1631
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 80 QYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVS 139
+ L I QF+ + L+A+E L FS ++GI + ++ +I ++ LT +
Sbjct: 1384 KALGNISMVFQFDALISLLSAREHLWLFSRIKGIKESQIENCVEAFIKMVDLTRIANSGC 1443
Query: 140 GRYSGGNKRKLSTAMALIGD 159
G YSGGNKRK+S +MA++G+
Sbjct: 1444 GGYSGGNKRKVSLSMAMLGN 1463
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
IG C Q + I LT E L +++L+G+ G + +GL E + +G SG
Sbjct: 569 IGCCLQTDIIWSQLTVLEHLVIYASLKGVEGRNIQREAERMATEVGLAEKMNAPAGSLSG 628
Query: 145 GNKRKLSTAMALIG 158
G KRKL +A IG
Sbjct: 629 GQKRKLCLGIAFIG 642
>sp|Q54BT5|ABCA3_DICDI ABC transporter A family member 3 OS=Dictyostelium discoideum
GN=abcA3 PE=3 SV=1
Length = 1702
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%)
Query: 82 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGR 141
L +G+C Q+N + L+A+E + + ++GI K ++ +I ++ L +
Sbjct: 1369 LRSVGFCHQYNSLIGLLSAREQIRLYCRIKGIEESKIQETVEAFIKMMDLGSIGNSNVAG 1428
Query: 142 YSGGNKRKLSTAMALIGD 159
YSGGNKRK++ ++A++G+
Sbjct: 1429 YSGGNKRKVALSVAIVGN 1446
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 84 GIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDL-LGLTEYRHRVSGRY 142
IG Q + I ++LT E L ++ L+G +K + + +GL H +G
Sbjct: 577 NIGVVLQQDIIWDNLTVLEHLIFYAQLKGYSNLKEAKTEAKKMGIEVGLELKLHNKAGTL 636
Query: 143 SGGNKRKLSTAMALIG 158
SGG KRKL +A IG
Sbjct: 637 SGGQKRKLCLGIAFIG 652
Score = 30.0 bits (66), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 7 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
L +G+C Q+N + L+A+E + + ++GI K ++ +I ++
Sbjct: 1369 LRSVGFCHQYNSLIGLLSAREQIRLYCRIKGIEESKIQETVEAFIKMM 1416
>sp|Q54DT1|ABCA9_DICDI ABC transporter A family member 9 OS=Dictyostelium discoideum
GN=abcA9 PE=3 SV=1
Length = 845
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 72 MTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGL 131
M NI H+ IG QF+ E L+ E L F+ L+G+P + ++ + + L
Sbjct: 600 MDNIHHV------IGVAMQFDIFWEDLSCVETLLYFTRLKGVPPEREIQSVESILKEVNL 653
Query: 132 TEYRHRVSGRYSGGNKRKLSTAMALIGDRDDGFQKLP 168
E + R+ SGG KR+LS A+A+ GD F P
Sbjct: 654 FEVKERLVKELSGGMKRRLSFAVAMTGDSSIIFLDEP 690
>sp|Q8K440|ABC8B_MOUSE ATP-binding cassette sub-family A member 8-B OS=Mus musculus
GN=Abca8b PE=2 SV=2
Length = 1620
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GYCPQ N + +LT +E LE F+A+RG+ + I D L L + S
Sbjct: 1359 LGYCPQENALWPNLTVKEHLEIFAAVRGLRKSHAAVAITRLADALKLQDQLKSPVKTLSE 1418
Query: 145 GNKRKLSTAMALIGD 159
G KRKL ++++G+
Sbjct: 1419 GVKRKLCFVLSILGN 1433
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 72 MTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGL 131
++ + L L G CPQ N + LT +E L F+ +RGIP + + L +
Sbjct: 546 LSEMADLENILRIAGVCPQANVQFDFLTVRENLRLFAKIRGIPPQDVEKEVQRVLLELEM 605
Query: 132 TEYRHRVSGRYSGGNKRKLSTAMALIGDR-----DDGFQKL-PFSSQNLYN 176
++ ++ SGG KRKL+ +A++GD D+ L PFS ++N
Sbjct: 606 KNIQNILAQNLSGGQKRKLTFGIAILGDSQIFLLDEPTAGLDPFSRHRVWN 656
Score = 38.1 bits (87), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
+GYCPQ N + +LT +E LE F+A+RG+ + I D L
Sbjct: 1359 LGYCPQENALWPNLTVKEHLEIFAAVRGLRKSHAAVAITRLADAL 1403
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 11 GYCPQFNGINEHLTAQEMLECFSALRGIP 39
G CPQ N + LT +E L F+ +RGIP
Sbjct: 560 GVCPQANVQFDFLTVRENLRLFAKIRGIP 588
>sp|P0A9U2|YBHF_SHIFL Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Shigella flexneri GN=ybhF PE=3 SV=1
Length = 578
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GY PQ G+ E LT E L ++ LR + G ++ L + R++G+ SG
Sbjct: 82 LGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSG 141
Query: 145 GNKRKLSTAMALIGD 159
G K+KL A L+G+
Sbjct: 142 GMKQKLGLACTLVGE 156
>sp|P0A9U1|YBHF_ECOLI Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Escherichia coli (strain K12) GN=ybhF PE=1 SV=1
Length = 578
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GY PQ G+ E LT E L ++ LR + G ++ L + R++G+ SG
Sbjct: 82 LGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSG 141
Query: 145 GNKRKLSTAMALIGD 159
G K+KL A L+G+
Sbjct: 142 GMKQKLGLACTLVGE 156
>sp|Q8K442|ABC8A_MOUSE ATP-binding cassette sub-family A member 8-A OS=Mus musculus
GN=Abca8a PE=2 SV=2
Length = 1620
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GYCPQ N + +LT +E LE F+A++G+ + I+ D L L + S
Sbjct: 1360 LGYCPQENALWLNLTVREHLEIFAAIKGMRKSDANVAIERLADALKLQDQLKSPVKTLSE 1419
Query: 145 GNKRKLSTAMALIGD 159
G KRKL ++++G+
Sbjct: 1420 GVKRKLCFVLSILGN 1434
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 86 GYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGG 145
G CPQ N + LT +E L F+ ++GI + + + L + ++ + SGG
Sbjct: 559 GVCPQCNVQFDFLTVRENLRLFAKIKGIQAHEVDNEVQRVLLELDMKNTQNILVQNLSGG 618
Query: 146 NKRKLSTAMALIGD-----RDDGFQKL-PFSSQNLYN 176
KRKL+ +A++GD D+ L PFS ++N
Sbjct: 619 QKRKLTFGIAILGDPQIFLLDEPTAGLDPFSRHRVWN 655
Score = 37.0 bits (84), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
+GYCPQ N + +LT +E LE F+A++G+ + I+ D L
Sbjct: 1360 LGYCPQENALWLNLTVREHLEIFAAIKGMRKSDANVAIERLADAL 1404
>sp|Q8K448|ABCA5_MOUSE ATP-binding cassette sub-family A member 5 OS=Mus musculus GN=Abca5
PE=1 SV=2
Length = 1642
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GYCPQ N + LT QE E + A++G+ +I L L E+ + +
Sbjct: 1376 MGYCPQTNPLWPDLTLQEHFEIYGAVKGMSPGDMKEVISRITKALDLKEHLQKTVKKLPA 1435
Query: 145 GNKRKLSTAMALIGD 159
G KRKL A++++G+
Sbjct: 1436 GIKRKLCFALSMLGN 1450
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 72 MTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGL 131
++ I +F+ IG CPQ + + LT +E L ++++GIP + + L +
Sbjct: 545 VSEIDEMFEARKMIGICPQSDINFDVLTVEENLSILASIKGIPANNIIQEVQKVLLDLDM 604
Query: 132 TEYRHRVSGRYSGGNKRKLSTAMALIGD 159
+ + + SGG KRKLS +A++G+
Sbjct: 605 QAIKDNQAKKLSGGQKRKLSVGIAVLGN 632
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGI-PG 40
+GYCPQ N + LT QE E + A++G+ PG
Sbjct: 1376 MGYCPQTNPLWPDLTLQEHFEIYGAVKGMSPG 1407
>sp|Q8WWZ7|ABCA5_HUMAN ATP-binding cassette sub-family A member 5 OS=Homo sapiens GN=ABCA5
PE=2 SV=2
Length = 1642
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 82 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGR 141
L +GYCPQ N + T QE E + A++G+ +I L L E+ + +
Sbjct: 1373 LKCMGYCPQINPLWPDTTLQEHFEIYGAVKGMSASDMKEVISRITHALDLKEHLQKTVKK 1432
Query: 142 YSGGNKRKLSTAMALIGD 159
G KRKL A++++G+
Sbjct: 1433 LPAGIKRKLCFALSMLGN 1450
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 72 MTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGL 131
++ I +F+ IG CPQ + + LT +E L ++++GIP + + L +
Sbjct: 545 VSEIDEMFEARKMIGICPQLDIHFDVLTVEENLSILASIKGIPANNIIQEVQKVLLDLDM 604
Query: 132 TEYRHRVSGRYSGGNKRKLSTAMALIGD 159
+ + + SGG KRKLS +A++G+
Sbjct: 605 QTIKDNQAKKLSGGQKRKLSLGIAVLGN 632
Score = 32.0 bits (71), Expect = 2.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 7 LSGIGYCPQFNGINEHLTAQEMLECFSALRGI 38
L +GYCPQ N + T QE E + A++G+
Sbjct: 1373 LKCMGYCPQINPLWPDTTLQEHFEIYGAVKGM 1404
>sp|Q58429|Y1023_METJA Uncharacterized ABC transporter ATP-binding protein MJ1023
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1023
PE=3 SV=1
Length = 262
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
IGY P+ G+ ++L+ F L G+ + IDYW++ L ++ Y++ S
Sbjct: 67 IGYLPEERGLYRDEKVVDVLKFFGELAGMKKEEIAKSIDYWLNKLKISNYKYSKIKELSK 126
Query: 145 GNKRKLSTAMALIGDRDDGFQKLPFSSQNLYNT 177
GN++K+ +++I + D PFS ++ N
Sbjct: 127 GNQQKVQFIVSVIHNPDIVILDEPFSGLDVVNV 159
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGSAIRFSPFQAAQNS 69
IGY P+ G+ ++L+ F L G+ + IDYW++ L + S ++ ++
Sbjct: 67 IGYLPEERGLYRDEKVVDVLKFFGELAGMKKEEIAKSIDYWLNKL----KISNYKYSKIK 122
Query: 70 LLMTNIMHLFQYLSGIGYCPQFNGINE 96
L Q++ + + P ++E
Sbjct: 123 ELSKGNQQKVQFIVSVIHNPDIVILDE 149
>sp|Q8CF82|ABCA5_RAT ATP-binding cassette sub-family A member 5 OS=Rattus norvegicus
GN=Abca5 PE=2 SV=1
Length = 1642
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GYCPQ N + +T QE E + A++G+ +I L L E+ + +
Sbjct: 1376 MGYCPQTNPLWPDITLQEHFEIYGAVKGMSSGDMKEVISRITKALDLKEHLQKTVKKLPA 1435
Query: 145 GNKRKLSTAMALIGD 159
G KRKL A++++G+
Sbjct: 1436 GIKRKLCFALSMLGN 1450
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 72 MTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGL 131
++ I +F+ IG CPQ + + LT +E L ++++GIP + + L +
Sbjct: 545 VSEIDEMFEARKMIGICPQSDMNFDVLTVEENLSILASVKGIPANNIIQEVQKVLLDLDM 604
Query: 132 TEYRHRVSGRYSGGNKRKLSTAMALIGD 159
+ + + SGG KRKLS +A++G+
Sbjct: 605 QAIKDNQAKKLSGGQKRKLSLGIAVLGN 632
Score = 32.0 bits (71), Expect = 2.2, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGI 38
+GYCPQ N + +T QE E + A++G+
Sbjct: 1376 MGYCPQTNPLWPDITLQEHFEIYGAVKGM 1404
>sp|Q1PEH6|AB3A_ARATH ABC transporter A family member 3 OS=Arabidopsis thaliana GN=ABCA3
PE=2 SV=3
Length = 932
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 83 SGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTE--YRHRVSG 140
+ +G CPQ + + E LT +E L + L+ + GV ++ + + L + +G
Sbjct: 688 TSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGVDLNQAVEESLRSVNLFHGGVADKPAG 747
Query: 141 RYSGGNKRKLSTAMALIGD 159
+YSGG KR+LS A++LIG+
Sbjct: 748 KYSGGMKRRLSVAISLIGN 766
>sp|Q9STT8|AB4A_ARATH ABC transporter A family member 4 OS=Arabidopsis thaliana GN=ABCA4
PE=3 SV=2
Length = 937
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 83 SGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTE--YRHRVSG 140
+ +G CPQ + + E LT +E L + L+ + G I+ + + L+ + +G
Sbjct: 693 TSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSDLNQAIEESLKSVNLSREGVADKPAG 752
Query: 141 RYSGGNKRKLSTAMALIG 158
+YSGG KR+LS A++LIG
Sbjct: 753 KYSGGMKRRLSVAISLIG 770
>sp|O94911|ABCA8_HUMAN ATP-binding cassette sub-family A member 8 OS=Homo sapiens GN=ABCA8
PE=1 SV=3
Length = 1581
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 82 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGR 141
L +GYCPQ N + +LT ++ LE ++A++G+ + I +D L L +
Sbjct: 1318 LEFLGYCPQENALWPNLTVRQHLEVYAAVKGLRKGDAEVAITRLVDALKLQDQLKSPVKT 1377
Query: 142 YSGGNKRKLSTAMALIGD 159
S G KRKL ++++G+
Sbjct: 1378 LSEGIKRKLCFVLSILGN 1395
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 7 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLL 54
L +GYCPQ N + +LT ++ LE ++A++G+ + I +D L
Sbjct: 1318 LEFLGYCPQENALWPNLTVRQHLEVYAAVKGLRKGDAEVAITRLVDAL 1365
>sp|Q9FLT8|AB12A_ARATH ABC transporter A family member 12 OS=Arabidopsis thaliana
GN=ABCA12 PE=3 SV=1
Length = 917
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 83 SGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTE--YRHRVSG 140
+ +G CPQ + + E LT +E L + L+ I G ++ + + L + + +G
Sbjct: 673 TSMGVCPQHDLLWETLTGREHLLFYGRLKNIKGSDLTQAVEESLKSVSLYDGGVGDKPAG 732
Query: 141 RYSGGNKRKLSTAMALIGDR-----DDGFQKL-PFSSQNLYNT 177
YSGG KR+LS A++LIG+ D+ L P S +NL+N
Sbjct: 733 NYSGGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKNLWNV 775
>sp|P94374|YXLF_BACSU Uncharacterized ABC transporter ATP-binding protein YxlF
OS=Bacillus subtilis (strain 168) GN=yxlF PE=2 SV=1
Length = 295
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
IGY PQ+ +TA E L L G+ K I ++ +GL E H+ G YSG
Sbjct: 71 IGYLPQYPAFYSWMTANEFLTFAGRLSGLSKRKCQEKIGEMLEFVGLHEAAHKRIGGYSG 130
Query: 145 GNKRKLSTAMALI 157
G K++L A AL+
Sbjct: 131 GMKQRLGLAQALL 143
>sp|Q9STT7|AB5A_ARATH ABC transporter A family member 5 OS=Arabidopsis thaliana GN=ABCA5
PE=3 SV=2
Length = 936
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 83 SGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTE--YRHRVSG 140
+ IG CPQ + + E LT +E L + L+ + G ++ + + L + +G
Sbjct: 692 TSIGVCPQHDLLWETLTGREHLLFYGRLKNLKGSDLDQAVEESLKSVNLFRGGVADKPAG 751
Query: 141 RYSGGNKRKLSTAMALIG 158
+YSGG KR+LS A++LIG
Sbjct: 752 KYSGGMKRRLSVAISLIG 769
>sp|Q8K441|ABCA6_MOUSE ATP-binding cassette sub-family A member 6 OS=Mus musculus GN=Abca6
PE=2 SV=2
Length = 1624
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 72 MTNIMHLFQYLSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGL 131
++++ L + IG CPQ N + LT +E L F+ ++GI + + L +
Sbjct: 545 LSDMQDLKEIRKAIGVCPQHNVQFDALTVKENLTLFAKIKGILPQDVEQEVQQILSELDM 604
Query: 132 TEYRHRVSGRYSGGNKRKLSTAMALIGD-----RDDGFQKL-PFSSQNLY 175
R ++ S G KRKL+ +A +GD D+ L PFS Q ++
Sbjct: 605 QNIRDDLAEHLSEGQKRKLTFGIATVGDPQILLLDEPTVGLDPFSRQRIW 654
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 86 GYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGG 145
GYCPQ NG+ +LT +E LE ++A++G+ + I ++ L L + + G
Sbjct: 1364 GYCPQENGLWPNLTVKEHLELYAAVKGLRKEDAVVAISRLVNALKLHDQLNVQVQNLVAG 1423
Query: 146 NKRKLSTAMALIGD 159
RKL ++++G+
Sbjct: 1424 ATRKLCFVLSILGN 1437
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 11 GYCPQFNGINEHLTAQEMLECFSALRGI 38
GYCPQ NG+ +LT +E LE ++A++G+
Sbjct: 1364 GYCPQENGLWPNLTVKEHLELYAAVKGL 1391
>sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7 OS=Arabidopsis thaliana GN=ABCA7
PE=1 SV=2
Length = 935
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 83 SGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTE--YRHRVSG 140
+ +G CPQ + + E LT +E L + L+ + G ++ + + L + +G
Sbjct: 691 TSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGADLNQAVEESLKSVNLFHGGVADKPAG 750
Query: 141 RYSGGNKRKLSTAMALIGD 159
+YSGG KR+LS A++LIG+
Sbjct: 751 KYSGGMKRRLSVAISLIGN 769
>sp|Q55BC0|ABCA8_DICDI ABC transporter A family member 8 OS=Dictyostelium discoideum
GN=abcA8 PE=3 SV=1
Length = 837
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 88 CPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGGNK 147
PQ + + LTA E L F+ L+GIP + I ++ + LT+ + +SGG K
Sbjct: 598 VPQDDILWLELTAMEHLHLFAELKGIPVRERDFQIAKVLEQVKLTKVANDQCSTFSGGMK 657
Query: 148 RKLSTAMALIGDRDDGFQKLP 168
R+LS A+ IGD F P
Sbjct: 658 RRLSVAIGCIGDPKIIFMDEP 678
>sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9
PE=1 SV=1
Length = 1624
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
+GYCPQ N + +LT ++ LE ++A++G+ + I +D L L + S
Sbjct: 1364 LGYCPQENALWPNLTVRQHLEVYAAVKGLRKGDAMIAITRLVDALKLQDQLKAPVKTLSE 1423
Query: 145 GNKRKLSTAMALIGD 159
G KRKL ++++G+
Sbjct: 1424 GIKRKLCFVLSILGN 1438
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 86 GYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGG 145
G+CPQ N LT +E L F+ ++GI + + + L + + ++ SGG
Sbjct: 562 GFCPQSNVQFGFLTVKENLRLFAKIKGILPHEVEKEVQRVVQELEMENIQDILAQNLSGG 621
Query: 146 NKRKLSTAMALIGD 159
RKL+ +A++GD
Sbjct: 622 QNRKLTFGIAILGD 635
Score = 33.9 bits (76), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 10 IGYCPQFNGINEHLTAQEMLECFSALRGI 38
+GYCPQ N + +LT ++ LE ++A++G+
Sbjct: 1364 LGYCPQENALWPNLTVRQHLEVYAAVKGL 1392
>sp|Q8K449|ABCA9_MOUSE ATP-binding cassette sub-family A member 9 OS=Mus musculus GN=Abca9
PE=1 SV=2
Length = 1623
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 87 YCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSGGN 146
YCPQ N + +LT +E LE ++A++G+ + I ++ L L ++ + S G
Sbjct: 1365 YCPQENVLWPNLTVKEHLELYAAVKGLKKKDAVVTITRLVNALKLQDHLKALVRTLSEGV 1424
Query: 147 KRKLSTAMALIGD 159
KRKL ++++G+
Sbjct: 1425 KRKLCFVLSILGN 1437
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 82 LSGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGR 141
L+ G CPQ N LT +E L F+ ++GI + + + L + + ++
Sbjct: 558 LTITGVCPQSNVQFGFLTVRENLRLFAKIKGILPHEVEQEVQQVLQDLEMENIQDILAQN 617
Query: 142 YSGGNKRKLSTAMALIGD 159
SGG KRKL+ +A++GD
Sbjct: 618 LSGGQKRKLTLGIAILGD 635
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 12 YCPQFNGINEHLTAQEMLECFSALRGI 38
YCPQ N + +LT +E LE ++A++G+
Sbjct: 1365 YCPQENVLWPNLTVKEHLELYAAVKGL 1391
>sp|P72335|NODI_RHIS3 Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
N33) GN=nodI PE=3 SV=1
Length = 304
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 85 IGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTEYRHRVSGRYSG 144
IG PQF+ +++ T +E L F G+ K +I ++ L G SG
Sbjct: 80 IGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSLLEFARLESKADARVGELSG 139
Query: 145 GNKRKLSTAMALIGD 159
G KR+L+ A ALI D
Sbjct: 140 GMKRRLTLARALIND 154
>sp|Q9FLT4|AB10A_ARATH ABC transporter A family member 10 OS=Arabidopsis thaliana
GN=ABCA10 PE=1 SV=2
Length = 909
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 83 SGIGYCPQFNGINEHLTAQEMLECFSALRGIPGVKSGPIIDYWIDLLGLTE--YRHRVSG 140
+ +G CPQ + + LT +E L + L+ I G ++ + + L + + +G
Sbjct: 665 TSMGVCPQHDLLWGTLTGREHLLFYGRLKNIKGSALMQAVEESLKSVSLFDGGVADKPAG 724
Query: 141 RYSGGNKRKLSTAMALIGD 159
+YSGG KR+LS A++LIG+
Sbjct: 725 KYSGGMKRRLSVAISLIGN 743
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,943,270
Number of Sequences: 539616
Number of extensions: 2720635
Number of successful extensions: 5902
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 5588
Number of HSP's gapped (non-prelim): 326
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)