Query psy8604
Match_columns 70
No_of_seqs 124 out of 1031
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 23:03:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8604.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8604hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w7j_A Myosin VA; motor protei 99.9 1E-23 3.5E-28 156.9 1.0 63 1-63 648-716 (795)
2 1kk8_A Myosin heavy chain, str 99.9 1.9E-23 6.5E-28 156.1 2.1 63 1-63 657-725 (837)
3 1lkx_A Myosin IE heavy chain; 99.9 1E-23 3.4E-28 155.3 0.0 63 1-63 574-642 (697)
4 2v26_A Myosin VI; calmodulin-b 99.9 1.6E-23 5.4E-28 155.7 0.9 63 1-63 651-719 (784)
5 4db1_A Myosin-7; S1DC, cardiac 99.9 9.9E-24 3.4E-28 156.8 -1.2 63 1-63 659-727 (783)
6 4anj_A Unconventional myosin-V 99.9 3.6E-23 1.2E-27 157.2 0.7 63 1-63 655-723 (1052)
7 2ycu_A Non muscle myosin 2C, a 99.9 3E-23 1E-27 156.9 0.1 63 1-63 637-705 (995)
8 1g8x_A Myosin II heavy chain f 99.9 5.4E-23 1.8E-27 155.8 1.5 63 1-63 642-710 (1010)
9 2dfs_A Myosin-5A; myosin-V, in 99.9 3.9E-23 1.3E-27 157.2 0.4 63 1-63 648-716 (1080)
10 1w9i_A Myosin II heavy chain; 99.9 1.2E-23 4E-28 156.2 -2.4 63 1-63 642-710 (770)
11 1i84_S Smooth muscle myosin he 99.8 8.1E-23 2.8E-27 155.9 0.3 62 1-62 670-737 (1184)
12 4ano_A ESSB; membrane protein, 69.4 3.3 0.00011 26.6 2.6 26 38-63 128-153 (219)
13 4ann_A ESSB; membrane protein, 64.8 4.6 0.00016 25.9 2.5 20 45-64 130-149 (215)
14 4db1_A Myosin-7; S1DC, cardiac 45.9 10 0.00035 28.6 2.0 25 45-69 680-704 (783)
15 1w7j_A Myosin VA; motor protei 44.3 12 0.00042 28.2 2.2 25 45-69 669-693 (795)
16 1x3a_A Synapse associated prot 44.3 14 0.00046 20.9 2.0 17 45-61 67-83 (100)
17 2v26_A Myosin VI; calmodulin-b 44.0 13 0.00043 28.1 2.2 25 45-69 672-696 (784)
18 4anj_A Unconventional myosin-V 43.2 13 0.00045 29.0 2.3 26 45-70 676-701 (1052)
19 1lkx_A Myosin IE heavy chain; 42.8 13 0.00044 27.7 2.1 25 45-69 595-619 (697)
20 1i84_S Smooth muscle myosin he 42.4 14 0.00046 28.8 2.2 25 45-69 691-715 (1184)
21 1w9i_A Myosin II heavy chain; 42.0 13 0.00045 28.0 2.1 25 45-69 663-687 (770)
22 3iz6_S 40S ribosomal protein S 41.4 15 0.00052 22.3 2.0 29 16-44 91-119 (146)
23 2dfs_A Myosin-5A; myosin-V, in 35.8 19 0.00065 28.1 2.1 25 45-69 669-693 (1080)
24 1kk8_A Myosin heavy chain, str 35.5 16 0.00056 27.7 1.7 25 45-69 678-702 (837)
25 3si5_X Protein CASC5; BUBR1-bl 33.4 33 0.0011 14.5 1.8 15 45-59 7-21 (24)
26 1zo0_A ODC-AZ, ornithine decar 32.6 30 0.001 20.5 2.2 34 30-63 69-102 (126)
27 1g8x_A Myosin II heavy chain f 32.3 22 0.00076 27.5 2.0 25 45-69 663-687 (1010)
28 3m7k_A Restriction endonucleas 31.8 25 0.00085 21.2 1.8 15 45-59 42-56 (142)
29 2ycu_A Non muscle myosin 2C, a 26.4 20 0.00068 27.7 0.9 25 45-69 658-682 (995)
30 3noh_A Putative peptide bindin 26.3 44 0.0015 20.0 2.2 27 8-38 20-46 (139)
31 3u5c_T 40S ribosomal protein S 24.5 16 0.00054 22.2 0.0 19 26-44 99-117 (144)
32 2xzm_T RPS19E; ribosome, trans 24.4 25 0.00085 21.6 0.9 17 27-43 103-119 (155)
33 2drn_C 24-residues peptide fro 23.8 33 0.0011 14.8 1.0 13 29-41 12-24 (26)
No 1
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=99.87 E-value=1e-23 Score=156.88 Aligned_cols=63 Identities=35% Similarity=0.602 Sum_probs=60.3
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++ ||+|++|.+|++||+.|+-
T Consensus 648 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~ 716 (795)
T 1w7j_A 648 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMK 716 (795)
T ss_dssp HHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSC
T ss_pred HHHHhcCCCeEEEEeCCCCcCChhhcCcccccchhhhCChHHHHHHHHcCCCccccHHHHHHHHHHhCC
Confidence 56789999999999999999999999999999999999999997 9999999999999999874
No 2
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=99.87 E-value=1.9e-23 Score=156.08 Aligned_cols=63 Identities=29% Similarity=0.516 Sum_probs=58.6
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++ ||+|++|.+|++||+.|+.
T Consensus 657 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~f~eF~~RY~~L~~ 725 (837)
T 1kk8_A 657 MKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAP 725 (837)
T ss_dssp HHHHTTEEEEEEEEECCCSSCCTTCCCHHHHHHHHTTSSSCC-----CCCSCEEEEHHHHHHHHGGGSG
T ss_pred HHHHHccCCeeeeeeCCCccCCcccccchheeeeccccCccHHHHHHHHhccccccHHHHHHHHHHhcc
Confidence 56799999999999999999999999999999999999999997 9999999999999999864
No 3
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=99.86 E-value=1e-23 Score=155.29 Aligned_cols=63 Identities=29% Similarity=0.479 Sum_probs=60.1
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++ ||+|++|.+|++||+.|.-
T Consensus 574 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~L~~ 642 (697)
T 1lkx_A 574 ITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCK 642 (697)
T ss_dssp HHHHTTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHTSHHHHHHHHHSCSBCCBSHHHHTTSCSSSC
T ss_pred HHHHHccCCcceEeecCCCcCCCCCcChhhccccCcccccHHHHHHHhcCCCccccHHHHHHHHHHhCc
Confidence 56799999999999999999999999999999999999999997 9999999999999998864
No 4
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=99.86 E-value=1.6e-23 Score=155.71 Aligned_cols=63 Identities=24% Similarity=0.404 Sum_probs=59.9
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++ ||+|++|.+|++||+.|..
T Consensus 651 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~ 719 (784)
T 2v26_A 651 LDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP 719 (784)
T ss_dssp HHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHTSCCSEEEEHHHHHHHHGGGCC
T ss_pred HHHHHccCCeeEEEecCCcccccCccccccccccccccccHHHHHHHHhcCCccccHHHHHHHHhhcCC
Confidence 56789999999999999999999999999999999999999997 9999999999999998764
No 5
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=99.86 E-value=9.9e-24 Score=156.82 Aligned_cols=63 Identities=32% Similarity=0.533 Sum_probs=49.3
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++ ||+|++|.+|++||+.|..
T Consensus 659 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~ 727 (783)
T 4db1_A 659 MTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNP 727 (783)
T ss_dssp HHHHHTSEEEEEEEECCCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHHTSCCEEEEC------------
T ss_pred HHHHHccCCEEEEeeCCCcccCCCcccchhhheeccccChHhheeehhcCCCccCcHHHHHHHHHHhCc
Confidence 56789999999999999999999999999999999999999997 9999999999999998864
No 6
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=99.86 E-value=3.6e-23 Score=157.20 Aligned_cols=63 Identities=24% Similarity=0.404 Sum_probs=59.9
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.+.|+.||..+|++||+|+||+|++ ||+|++|.+|++||+.|..
T Consensus 655 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvLE~irI~r~Gyp~R~~f~eF~~RY~~L~~ 723 (1052)
T 4anj_A 655 LDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP 723 (1052)
T ss_dssp HHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHHTHHHHHHHTTTCCCEEEEHHHHHHHHHTTSC
T ss_pred HHHHcCcCCEEEEEECCCccCCCCcCCHHHHHHHHHHhhHHHHHHHHhcCCCCcCcHHHHHHHHHHhCc
Confidence 56789999999999999999999999999999999999999996 9999999999999998864
No 7
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.85 E-value=3e-23 Score=156.94 Aligned_cols=63 Identities=32% Similarity=0.491 Sum_probs=60.1
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++ ||+|++|.+|++||+.|+.
T Consensus 637 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~ 705 (995)
T 2ycu_A 637 MATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTP 705 (995)
T ss_dssp HHHHHTSEEEEEEEECCCSSCCTTCCCTTTHHHHHHHHTHHHHHHHHHHSCCEEEEHHHHHHHHGGGST
T ss_pred HHHHHhcCcceeeeecCCccccccccCHHHHHHHhcccchHHHHHHHHhcCCccccHHHHHHHHHHhCc
Confidence 56789999999999999999999999999999999999999997 9999999999999999864
No 8
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.85 E-value=5.4e-23 Score=155.77 Aligned_cols=63 Identities=32% Similarity=0.542 Sum_probs=60.2
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++ ||+|++|.+|++||+.|+-
T Consensus 642 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~ 710 (1010)
T 1g8x_A 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAP 710 (1010)
T ss_dssp HHHHTTSEEEEEEEECSCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHTTSCCEEEEHHHHHHHHGGGST
T ss_pred HHHHHhcCCeeeeeecCCcccccCCcChhhcchhcccCccHHHHHHHHhCCcccccHHHHHHHHHHhCC
Confidence 56799999999999999999999999999999999999999997 9999999999999998863
No 9
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.85 E-value=3.9e-23 Score=157.23 Aligned_cols=63 Identities=35% Similarity=0.602 Sum_probs=60.1
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.+.|+.||..+|++||+|+||+|++ ||+|++|.+|++||+.|+-
T Consensus 648 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~L~~ 716 (1080)
T 2dfs_A 648 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMK 716 (1080)
T ss_dssp HHHHHSSEEEEEEEECCCSSCCTTCCCHHHHHHHHHTTTHHHHHHHHTTSCCEEEEHHHHHHHHTTTSC
T ss_pred HHHHHhcCCeeEEEecCCCCCCchhcCHHhhHHHHhhcccHHHHhHHhcCCCchhhHHHHHHHHHHHCC
Confidence 56789999999999999999999999999999999999999996 9999999999999999864
No 10
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=99.85 E-value=1.2e-23 Score=156.24 Aligned_cols=63 Identities=32% Similarity=0.542 Sum_probs=51.3
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~ 63 (70)
|++|++|+||||||||||+.|.|+.||..+|++||+|+|++|++ ||+|++|.+|++||+.|.-
T Consensus 642 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~ 710 (770)
T 1w9i_A 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAP 710 (770)
T ss_dssp HHHHHTSEEEEEEEECSCSSCCSSCCCHHHHHHHHHHSSHHHHHHHTTSSCCEEEESCC----------
T ss_pred HHHHHhcCceeeeeecCCcccccCccCchhhHhHhcccchHHHHHHHHhcCcccccHHHHHHHHHHhcc
Confidence 56789999999999999999999999999999999999999997 9999999999999998854
No 11
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.85 E-value=8.1e-23 Score=155.87 Aligned_cols=62 Identities=34% Similarity=0.551 Sum_probs=59.5
Q ss_pred CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhh
Q psy8604 1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTG 62 (70)
Q Consensus 1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~ 62 (70)
|++|++|+||||||||||+.+.|+.||..+|++||+|+||+|++ ||+|++|.+|+.||+.|+
T Consensus 670 ~~~l~~t~phfvRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~~~~F~~ry~~L~ 737 (1184)
T 1i84_S 670 MTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILA 737 (1184)
T ss_dssp HHHHTTSEEEECCEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHTTTTC
T ss_pred HHHHHhcCCCceeeeCCCCcCCCCcccHHHHHHHHhhcCchHHHHhHhhcCcccccHHHHHHHHHHhc
Confidence 56789999999999999999999999999999999999999997 999999999999999875
No 12
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=69.35 E-value=3.3 Score=26.61 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=19.9
Q ss_pred hCccccCCCCCCCHHHHHHHHhhhhh
Q psy8604 38 TGMLKTDIPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 38 ~g~le~~~p~r~~~~~F~~ry~~~~~ 63 (70)
-|+.+.+-|..++-++|+.+||++.+
T Consensus 128 RGi~~~lpP~e~~ee~fl~qyKali~ 153 (219)
T 4ano_A 128 VGVKESLPPDEWDDERLLREVKATVL 153 (219)
T ss_dssp CEETTTBSSCSCCHHHHHHHHHHHHH
T ss_pred cCCcccCCCCCCCHHHHHHHHHHHHH
Confidence 35555556888888999999998876
No 13
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=64.82 E-value=4.6 Score=25.92 Aligned_cols=20 Identities=5% Similarity=-0.095 Sum_probs=16.9
Q ss_pred CCCCCCHHHHHHHHhhhhhh
Q psy8604 45 IPNNFDIDTVQRQLRYTGML 64 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~ 64 (70)
-|..++-++|+.+||++.++
T Consensus 130 ~P~~~~ee~fL~qyKAliia 149 (215)
T 4ann_A 130 DPLPVSEAEFLTRYKALVIC 149 (215)
T ss_dssp SCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHH
Confidence 57788889999999998763
No 14
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=45.90 E-value=10 Score=28.62 Aligned_cols=25 Identities=36% Similarity=0.525 Sum_probs=22.9
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..++-...+++.|++|++|++||
T Consensus 680 ~p~~fd~~~V~~QLr~~GvlE~iri 704 (783)
T 4db1_A 680 SPGVMDNPLVMHQLRCNGVLEGIRI 704 (783)
T ss_dssp CTTCCCHHHHHHHHHHSSHHHHHHH
T ss_pred CCCcccchhhheeccccChHhheee
Confidence 4678999999999999999999997
No 15
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=44.28 E-value=12 Score=28.24 Aligned_cols=25 Identities=40% Similarity=0.628 Sum_probs=22.8
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..++-....++.|++|++|++||
T Consensus 669 ~p~~fd~~~V~~QLr~~GvlE~iri 693 (795)
T 1w7j_A 669 FPFTFDEKRAVQQLRACGVLETIRI 693 (795)
T ss_dssp CTTCCCHHHHHHHHHHTTHHHHHHH
T ss_pred ChhhcCcccccchhhhCChHHHHHH
Confidence 4678999999999999999999997
No 16
>1x3a_A Synapse associated protein 1; BSD domain, homolog of the drosophila SAP47, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.240.1.1
Probab=44.27 E-value=14 Score=20.90 Aligned_cols=17 Identities=18% Similarity=0.321 Sum_probs=14.7
Q ss_pred CCCCCCHHHHHHHHhhh
Q psy8604 45 IPNNFDIDTVQRQLRYT 61 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~ 61 (70)
=|..+++.+|+.||=+.
T Consensus 67 VP~~v~e~~FW~rYFyr 83 (100)
T 1x3a_A 67 VPKLVKEEVFWRNYFYR 83 (100)
T ss_dssp TTTTSCHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHH
Confidence 59999999999998554
No 17
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=43.97 E-value=13 Score=28.08 Aligned_cols=25 Identities=20% Similarity=0.426 Sum_probs=22.7
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..++-...+++.|++|++|++||
T Consensus 672 ~p~~fd~~~V~~QLr~~GvlE~iri 696 (784)
T 2v26_A 672 TSHHFEGAQILSQLQCSGMVSVLDL 696 (784)
T ss_dssp CSSCCCHHHHHHHHHHTTHHHHHHH
T ss_pred ccCccccccccccccccccHHHHHH
Confidence 4667899999999999999999997
No 18
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=43.24 E-value=13 Score=29.00 Aligned_cols=26 Identities=19% Similarity=0.408 Sum_probs=23.4
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhccC
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRYY 70 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~~ 70 (70)
-|..++-....++.|++|++|++||.
T Consensus 676 ~p~~fd~~~V~~QLr~~GvLE~irI~ 701 (1052)
T 4anj_A 676 TSHHFEGAQILSQLQCSGMVSVLDLM 701 (1052)
T ss_dssp CSSCCCHHHHHHHHHHHTHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHHhhHHHHHHHH
Confidence 47789999999999999999999983
No 19
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=42.78 E-value=13 Score=27.66 Aligned_cols=25 Identities=40% Similarity=0.632 Sum_probs=22.8
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..++-....++.|++|++|++||
T Consensus 595 ~p~~fd~~~V~~QLr~~GvlE~iri 619 (697)
T 1lkx_A 595 QAGVIDEDRVRHQVRYLGLLENVRV 619 (697)
T ss_dssp CTTCCCHHHHHHHHHHHTSHHHHHH
T ss_pred CCCCcChhhccccCcccccHHHHHH
Confidence 4677899999999999999999997
No 20
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=42.42 E-value=14 Score=28.83 Aligned_cols=25 Identities=32% Similarity=0.496 Sum_probs=22.9
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..++-...+++.|++|++|++||
T Consensus 691 ~p~~fd~~~V~~QLr~~GvlE~iri 715 (1184)
T 1i84_S 691 RAGKLDAHLVLEQLRCNGVLEGIRI 715 (1184)
T ss_dssp CSSCCCHHHHHHHHHHTTHHHHHHH
T ss_pred CCCcccHHHHHHHHhhcCchHHHHh
Confidence 4778999999999999999999997
No 21
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=41.97 E-value=13 Score=28.01 Aligned_cols=25 Identities=32% Similarity=0.595 Sum_probs=22.9
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..+.-...+++.|++|++|++||
T Consensus 663 ~p~~fd~~~V~~QLr~~GvlE~iri 687 (770)
T 1w9i_A 663 LPAKLEDKVVLDQLRCNGVLEGIRI 687 (770)
T ss_dssp CSSCCCHHHHHHHHHHSSHHHHHHH
T ss_pred ccCccCchhhHhHhcccchHHHHHH
Confidence 4678999999999999999999997
No 22
>3iz6_S 40S ribosomal protein S19 (S19E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=41.43 E-value=15 Score=22.34 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=19.0
Q ss_pred cCCCCCCCCCccHHHHHHHHHHhCccccC
Q psy8604 16 KSNTMKIPNNFDIDTVLRQLRYTGMLKTD 44 (70)
Q Consensus 16 kPN~~k~p~~fd~~~v~~Ql~~~g~le~~ 44 (70)
+|+.....+---...+++||...|++|..
T Consensus 91 ~P~h~~~asg~iiR~~LQqLE~~g~Vek~ 119 (146)
T 3iz6_S 91 RPPHFCKSSGAISRNILQQLQKMGIIDVD 119 (146)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHHHTSEEEE
T ss_pred CCCcccCCCcHHHHHHHHHHHHCCCeEec
Confidence 34443333333345799999999999864
No 23
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=35.80 E-value=19 Score=28.06 Aligned_cols=25 Identities=40% Similarity=0.628 Sum_probs=22.9
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..++-....++.+++|++|++||
T Consensus 669 ~p~~fd~~~V~~QLr~~GvlE~iri 693 (1080)
T 2dfs_A 669 FPFTFDEKRAVQQLRACGVLETIRI 693 (1080)
T ss_dssp CTTCCCHHHHHHHHHTTTHHHHHHH
T ss_pred CchhcCHHhhHHHHhhcccHHHHhH
Confidence 4678999999999999999999997
No 24
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=35.54 E-value=16 Score=27.70 Aligned_cols=25 Identities=32% Similarity=0.514 Sum_probs=19.1
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..++-...+++.|++|++|++||
T Consensus 678 ~p~~fd~~~V~~QLr~~GvlE~iri 702 (837)
T 1kk8_A 678 QPGLVDAELVLHQLQCNGVLEGIRI 702 (837)
T ss_dssp CTTCCCHHHHHHHHTTSSSCC----
T ss_pred CcccccchheeeeccccCccHHHHH
Confidence 4677899999999999999999997
No 25
>3si5_X Protein CASC5; BUBR1-blinkin complex, mitotic checkpoint, BUBR1, blinkin/KN chromosome segregation, cell cycle; 2.20A {Homo sapiens}
Probab=33.45 E-value=33 Score=14.51 Aligned_cols=15 Identities=20% Similarity=0.452 Sum_probs=11.0
Q ss_pred CCCCCCHHHHHHHHh
Q psy8604 45 IPNNFDIDTVQRQLR 59 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~ 59 (70)
....+.|.+|+.|.+
T Consensus 7 sekKinfndFIKRLK 21 (24)
T 3si5_X 7 SENKIDFNDFIKRLK 21 (26)
T ss_pred hhhhccHHHHHHHHh
Confidence 345678899988865
No 26
>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} SCOP: d.108.1.7
Probab=32.63 E-value=30 Score=20.47 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=28.3
Q ss_pred HHHHHHHHhCccccCCCCCCCHHHHHHHHhhhhh
Q psy8604 30 TVLRQLRYTGMLKTDIPNNFDIDTVQRQLRYTGM 63 (70)
Q Consensus 30 ~v~~Ql~~~g~le~~~p~r~~~~~F~~ry~~~~~ 63 (70)
...+||+|.+++-...-.|-+.+.+++-|+++|+
T Consensus 69 fAEe~L~~~~V~v~f~K~r~dr~~l~rtF~f~GF 102 (126)
T 1zo0_A 69 FAEEQLRADHVFICFPKNREDRAALLRTFSFLGF 102 (126)
T ss_dssp HHHHHHCCCCEEEEECCCSSCHHHHHHHHTTTCC
T ss_pred HHHHhcCCCEEEEEEecCCcchHhhheeeeecce
Confidence 3558899998886667778888999999999997
No 27
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=32.34 E-value=22 Score=27.51 Aligned_cols=25 Identities=32% Similarity=0.595 Sum_probs=22.7
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..+.-....++.|++|++|++||
T Consensus 663 ~p~~fd~~~V~~QLr~~GvlE~iri 687 (1010)
T 1g8x_A 663 LPAKLEDKVVLDQLRCNGVLEGIRI 687 (1010)
T ss_dssp CTTCCCHHHHHHHHHHSSHHHHHHH
T ss_pred ccCCcChhhcchhcccCccHHHHHH
Confidence 4677899999999999999999997
No 28
>3m7k_A Restriction endonuclease PACI; HNH restriction endonuclease, beta-BETA-alpha-metal active S base-PAIR RARE cutter; HET: DNA; 1.92A {Pseudomonas alcaligenes} PDB: 3ldy_A*
Probab=31.79 E-value=25 Score=21.24 Aligned_cols=15 Identities=20% Similarity=0.084 Sum_probs=12.8
Q ss_pred CCCCCCHHHHHHHHh
Q psy8604 45 IPNNFDIDTVQRQLR 59 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~ 59 (70)
-...+++++|..+|+
T Consensus 42 ~~~~f~~~eF~~WY~ 56 (142)
T 3m7k_A 42 HANTFTKATFLAWYG 56 (142)
T ss_dssp CCBCCCHHHHHHHHC
T ss_pred hhcCcCHHHHHHHHc
Confidence 456679999999999
No 29
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=26.39 E-value=20 Score=27.67 Aligned_cols=25 Identities=28% Similarity=0.426 Sum_probs=22.0
Q ss_pred CCCCCCHHHHHHHHhhhhhhhhhcc
Q psy8604 45 IPNNFDIDTVQRQLRYTGMLKTVRY 69 (70)
Q Consensus 45 ~p~r~~~~~F~~ry~~~~~~~~~~~ 69 (70)
-|..++-....++.|++|++|++||
T Consensus 658 ~p~~fd~~~V~~QLr~~GvlE~iri 682 (995)
T 2ycu_A 658 RAGKLEPRLVLDQLRCNGVLEGIRI 682 (995)
T ss_dssp CTTCCCTTTHHHHHHHHTHHHHHHH
T ss_pred cccccCHHHHHHHhcccchHHHHHH
Confidence 4667888889999999999999997
No 30
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=26.33 E-value=44 Score=19.96 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=21.3
Q ss_pred CCceeeeecCCCCCCCCCccHHHHHHHHHHh
Q psy8604 8 NPFFIRCIKSNTMKIPNNFDIDTVLRQLRYT 38 (70)
Q Consensus 8 ~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~ 38 (70)
+-.|+.||+|-. +.++..-..+||+..
T Consensus 20 eG~Yl~~iNp~l----d~~~~~~~R~~Lka~ 46 (139)
T 3noh_A 20 EGSYIFCMNPLL----DKLSDEDIREQLKAF 46 (139)
T ss_dssp CSEEEEEECTTS----GGGCCHHHHHHHHHH
T ss_pred ccceEEEecccc----CccccHHHHHHHHHH
Confidence 347999999976 446678889999875
No 31
>3u5c_T 40S ribosomal protein S19-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_S 3o30_M 3o2z_M 3u5g_T 3jyv_T*
Probab=24.54 E-value=16 Score=22.19 Aligned_cols=19 Identities=21% Similarity=0.226 Sum_probs=15.2
Q ss_pred ccHHHHHHHHHHhCccccC
Q psy8604 26 FDIDTVLRQLRYTGMLKTD 44 (70)
Q Consensus 26 fd~~~v~~Ql~~~g~le~~ 44 (70)
--...+++||...|++|..
T Consensus 99 ~iiR~~LQqLE~~g~vek~ 117 (144)
T 3u5c_T 99 SINRKVLQALEKIGIVEIS 117 (144)
T ss_dssp HHHHHHHHHHHHTTSEECC
T ss_pred HHHHHHHHHHHHCCCeeec
Confidence 3345789999999999875
No 32
>2xzm_T RPS19E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_T
Probab=24.38 E-value=25 Score=21.59 Aligned_cols=17 Identities=12% Similarity=0.188 Sum_probs=14.2
Q ss_pred cHHHHHHHHHHhCcccc
Q psy8604 27 DIDTVLRQLRYTGMLKT 43 (70)
Q Consensus 27 d~~~v~~Ql~~~g~le~ 43 (70)
-...+++||...|++|.
T Consensus 103 iiR~~LQqLE~~g~Vek 119 (155)
T 2xzm_T 103 ILRWALKSLEDLKIIRK 119 (155)
T ss_dssp HHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHCCCEee
Confidence 34568899999999986
No 33
>2drn_C 24-residues peptide from AN A-kinase anchoring protein; AKAP, PKA, signal transduction, 4-helix bundle, helix- loop-helix; NMR {Rattus norvegicus}
Probab=23.75 E-value=33 Score=14.78 Aligned_cols=13 Identities=31% Similarity=0.601 Sum_probs=9.8
Q ss_pred HHHHHHHHHhCcc
Q psy8604 29 DTVLRQLRYTGML 41 (70)
Q Consensus 29 ~~v~~Ql~~~g~l 41 (70)
.-|.+|++.+|-+
T Consensus 12 daVi~qvkasgal 24 (26)
T 2drn_C 12 DAVIEQVKAAGAY 24 (26)
T ss_dssp HHHHHHHTTTTTC
T ss_pred HHHHHHHHhcccc
Confidence 3578899988865
Done!