RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8607
         (131 letters)



>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 139

 Score = 64.5 bits (157), Expect = 6e-15
 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 37  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLPQPSRALC 96
           AHLNDLENI  FL I LLY ++ P +  A    RI+  AR  HTI Y +  LPQP+R L 
Sbjct: 66  AHLNDLENIVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAY-LTPLPQPNRGLA 124

Query: 97  FTSGVLIEVYMIV 109
           F  G  + + M  
Sbjct: 125 FFVGYGVTLSMAY 137


>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 146

 Score = 40.2 bits (94), Expect = 1e-05
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 1/80 (1%)

Query: 30  DLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVYGIYVLP 89
           + E    A +N  E  P FL    +  +       A     +Y  AR  +   Y      
Sbjct: 44  EFERVYRAQVNCSEYFPLFLATLWVAGIFFHEG-AAALCGLVYLFARLRYFQGYARSAQL 102

Query: 90  QPSRALCFTSGVLIEVYMIV 109
           + +        + + V +  
Sbjct: 103 RLAPLYASARALWLLVALAA 122


>d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating
           protein, FLAP {Human (Homo sapiens) [TaxId: 9606]}
          Length = 139

 Score = 27.9 bits (62), Expect = 0.23
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 30  DLENTPGAHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTIVY 83
             E    A+ N ++  P FL +     +    V  A +   +Y   R  + + Y
Sbjct: 49  AFERVYTANQNCVDAYPTFLAVLWSAGLLCSQV-PAAFAGLMYLFVRQKYFVGY 101


>d1scfa_ a.26.1.2 (A:) Stem cell factor, SCF {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 131

 Score = 26.7 bits (59), Expect = 0.61
 Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 43 ENIPGFLIIALLYIMTDPGVMLACWL-IRIYTLARFLHTI 81
           N+P   +I L Y+     +   CW+   +  L+  L  +
Sbjct: 10 ANLPKDYMITLKYVPGMDVLPSHCWISEMVVQLSDSLTDL 49


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.331    0.144    0.459 

Gapped
Lambda     K      H
   0.267   0.0649    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 492,455
Number of extensions: 20375
Number of successful extensions: 67
Number of sequences better than 10.0: 1
Number of HSP's gapped: 65
Number of HSP's successfully gapped: 9
Length of query: 131
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 55
Effective length of database: 1,364,116
Effective search space: 75026380
Effective search space used: 75026380
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 48 (22.4 bits)