RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8608
         (93 letters)



>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 139

 Score = 56.8 bits (137), Expect = 2e-12
 Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 12  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALC 71
           AHLNDLENI  FL I LLY ++ P +  A    RI+  AR  HT+ Y +  LPQP+R L 
Sbjct: 66  AHLNDLENIVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAY-LTPLPQPNRGLA 124

Query: 72  FTSGVLIEVYMIV 84
           F  G  + + M  
Sbjct: 125 FFVGYGVTLSMAY 137


>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 146

 Score = 38.2 bits (89), Expect = 2e-05
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 1/79 (1%)

Query: 12  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVYGIYVLPQPSRALC 71
           A +N  E  P FL    +  +       A     +Y  AR  +   Y      + +    
Sbjct: 51  AQVNCSEYFPLFLATLWVAGIFFHEG-AAALCGLVYLFARLRYFQGYARSAQLRLAPLYA 109

Query: 72  FTSGVLIEVYMIVIVIMAY 90
               + + V +  + ++A+
Sbjct: 110 SARALWLLVALAALGLLAH 128


>d1scfa_ a.26.1.2 (A:) Stem cell factor, SCF {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 131

 Score = 26.4 bits (58), Expect = 0.46
 Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 18 ENIPGFLIIALLYIMTDPGVMLACWL-IRIYTLARFLH 54
           N+P   +I L Y+     +   CW+   +  L+  L 
Sbjct: 10 ANLPKDYMITLKYVPGMDVLPSHCWISEMVVQLSDSLT 47


>d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating
           protein, FLAP {Human (Homo sapiens) [TaxId: 9606]}
          Length = 139

 Score = 23.6 bits (51), Expect = 4.1
 Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 12  AHLNDLENIPGFLIIALLYIMTDPGVMLACWLIRIYTLARFLHTVVY 58
           A+ N ++  P FL +     +    V  A +   +Y   R  + V Y
Sbjct: 56  ANQNCVDAYPTFLAVLWSAGLLCSQV-PAAFAGLMYLFVRQKYFVGY 101


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.337    0.148    0.460 

Gapped
Lambda     K      H
   0.267   0.0649    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 362,509
Number of extensions: 14401
Number of successful extensions: 54
Number of sequences better than 10.0: 1
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 13
Length of query: 93
Length of database: 2,407,596
Length adjustment: 56
Effective length of query: 37
Effective length of database: 1,638,716
Effective search space: 60632492
Effective search space used: 60632492
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 47 (22.1 bits)