BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8609
(182 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DWB|A Chain A, Structure Of Human Ece-1 Complexed With Phosphoramidon
Length = 670
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Query: 10 DEKIVRAYYKYMLDIAVLMGA-DREAAVEELTESLNFEIALANISLPQEERRNATKLYNP 68
+EK++ Y YM+ + L+G D EA ++ + L+FE ALANI++PQE+RR+ +Y+
Sbjct: 174 NEKVLTGYLNYMVQLGKLLGGGDEEAIRPQMQQILDFETALANITIPQEKRRDEELIYHK 233
Query: 69 MKISELQERYPSIPWTEYINTILSPNAQLKDDETIIVTEPEYIHDLEKLLSTTPKRTMAN 128
+ +ELQ P+I W ++NTI P ++ + E I+V + EY+ + L++TT + + N
Sbjct: 234 VTAAELQTLAPAINWLPFLNTIFYP-VEINESEPIVVYDKEYLEQISTLINTTDRCLLNN 292
Query: 129 YVMWRVTAASVGFFTEAIGARRLAFITAVTGVSEEE-ARWKECVGRVKGGFSLAI 182
Y++W + + F + F+ + G + RWK CV + A+
Sbjct: 293 YMIWNLVRKTSSFLDQRFQDADEKFMEVMYGTKKTSLPRWKFCVSDTENNLGFAL 347
>pdb|1DMT|A Chain A, Structure Of Human Neutral Endopeptidase Complexed With
Phosphoramidon
pdb|1R1H|A Chain A, Structural Analysis Of Neprilysin With Various Specific
And Potent Inhibitors
pdb|1R1I|A Chain A, Structural Analysis Of Neprilysin With Various Specific
And Potent Inhibitors
pdb|1R1J|A Chain A, Structural Analysis Of Neprilysin With Various Specific
And Potent Inhibitors
pdb|1Y8J|A Chain A, Crystal Structure Of Human Nep Complexed With An
Imidazo[4,5- C]pyridine Inhibitor
pdb|2QPJ|A Chain A, Human Nep Complexed With A Bifunctional NepDPP IV
INHIBITOR
pdb|2YB9|A Chain A, Crystal Structure Of Human Neutral Endopeptidase Complexed
With A Heteroarylalanine Diacid
Length = 696
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 8 GLDEKIVRAYYKYMLDIAVLMGADREAAVEE------LTESLNFEIALANISLPQEERRN 61
G+ ++ AY +M+ +A L+ + ++E + + + E +AN + E+R +
Sbjct: 182 GIYKEACTAYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPEDRND 241
Query: 62 ATKLYNPMKISELQERYP------SIPWTEYINTILSP-NAQLKDDETIIVTEPEYIHDL 114
LYN M ++++Q + W + N I+S N + ++E ++V PEY+ L
Sbjct: 242 PMLLYNKMTLAQIQNNFSLEINGKPFSWLNFTNEIMSTVNISITNEEDVVVYAPEYLTKL 301
Query: 115 EKLLSTTPKRTMANYVMWRVTAASVGFFTEAIGARRLAFITAVTGVSEEEARWKECVGRV 174
+ +L+ R + N + WR V + R AF A+ G + E A W+ C V
Sbjct: 302 KPILTKYSARDLQNLMSWRFIMDLVSSLSRTYKESRNAFRKALYGTTSETATWRRCANYV 361
Query: 175 KGGFSLAI 182
G A+
Sbjct: 362 NGNMENAV 369
>pdb|3ZUK|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Zinc
Metalloprotease Zmp1 In Complex With Inhibitor
pdb|3ZUK|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Zinc
Metalloprotease Zmp1 In Complex With Inhibitor
Length = 699
Score = 43.1 bits (100), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Query: 45 FEIALANISLPQEERRNATKLYNPMKISELQERYPSIPWTEYINTILS-PNAQLKDDETI 103
E LA+ +RR+A YN ++LQ W ++ + S P+A + +
Sbjct: 241 LETKLADAHWDVVKRRDADLGYNLRTFAQLQTEGAGFDWVSWVTALGSAPDAMTE----L 296
Query: 104 IVTEPEYIHDLEKLLSTTPKRTMANYVMWRVTAASVGFFTEAIGARRLAFI-TAVTGVSE 162
+V +P+Y+ L ++ + WR+ A + T A+ A F +TG +
Sbjct: 297 VVRQPDYLVTFASLWASVNVEDWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGAQQ 356
Query: 163 EEARWKECVGRVK 175
RWK V V+
Sbjct: 357 LRDRWKRGVSLVE 369
>pdb|2OR2|A Chain A, Structure Of The W47aW242A MUTANT OF BACTERIAL
Phosphatidylinositol-Specific Phospholipase C
pdb|2OR2|B Chain B, Structure Of The W47aW242A MUTANT OF BACTERIAL
Phosphatidylinositol-Specific Phospholipase C
Length = 296
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K ++ + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTHDSGTFKLQNPIKQVAGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|1T6M|A Chain A, X-Ray Structure Of The R70d Pi-Plc Enzyme: Insight Into
The Role Of Calcium And Surrounding Amino Acids On
Active Site Geometry And Catalysis.
pdb|1T6M|B Chain B, X-Ray Structure Of The R70d Pi-Plc Enzyme: Insight Into
The Role Of Calcium And Surrounding Amino Acids On
Active Site Geometry And Catalysis
Length = 299
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I + +L DD TI+
Sbjct: 22 IPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIDGRLTDDNTIVL 81
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 82 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 111
>pdb|3EA3|A Chain A, Crystal Structure Of The Y246sY247SY248SY251S MUTANT OF
Phosphatidylinositol-Specific Phospholipase C From
Bacillus Thuringiensis
pdb|3EA3|B Chain B, Crystal Structure Of The Y246sY247SY248SY251S MUTANT OF
Phosphatidylinositol-Specific Phospholipase C From
Bacillus Thuringiensis
Length = 298
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|3EA1|A Chain A, Crystal Structure Of The Y247sY251S MUTANT OF
Phosphatidylinositol-Specific Phospholipase C From
Bacillus Thuringiensis
pdb|3EA1|B Chain B, Crystal Structure Of The Y247sY251S MUTANT OF
Phosphatidylinositol-Specific Phospholipase C From
Bacillus Thuringiensis
pdb|3EA2|A Chain A, Crystal Structure Of The Myo-Inositol Bound Y247sY251S
Mutant Of Phosphatidylinositol-Specific Phospholipase C
From Bacillus Thuringiensis
pdb|3EA2|B Chain B, Crystal Structure Of The Myo-Inositol Bound Y247sY251S
Mutant Of Phosphatidylinositol-Specific Phospholipase C
From Bacillus Thuringiensis
Length = 298
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|1GYM|A Chain A, Phosphatidylinositol-Specific Phospholipase C In Complex
With Glucosamine-(Alpha-1-6)-Myo-Inositol
pdb|1PTD|A Chain A, Phosphatidylinositol-Specific Phospholipase C
pdb|1PTG|A Chain A, Phosphatidylinositol-specific Phospholipase C In Complex
With Myo-inositol
Length = 298
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|2PTD|A Chain A, Phosphatidylinositol-Specific Phospholipase C Mutant D198e
Length = 298
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|3PTD|A Chain A, Phosphatidylinositol-Specific Phospholipase C Mutant D274s
Length = 298
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|4PTD|A Chain A, Phosphatidylinositol-Specific Phospholipase C Mutant D274n
Length = 298
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|7PTD|A Chain A, Phosphatidylinositol-Specific Phospholipase C Mutant R163k
Length = 298
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|5PTD|A Chain A, Phosphatidylinositol-Specific Phospholipase C Mutant H32a
Length = 298
Score = 30.0 bits (66), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTADSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|6PTD|A Chain A, Phosphatidylinositol-Specific Phospholipase C Mutant H32l
Length = 298
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 47 IALANISLPQEERRNATKLYNPMK-ISELQERYPSIPWTEYINTILSPNAQLKDDETII- 104
I LA IS+P KL NP+K + + + Y ++ I +L DD TI+
Sbjct: 21 IPLARISIPGTLDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVL 80
Query: 105 --------VTEPEYIHDLEKLLSTTPKRTM 126
VT E+I++ ++ L P T+
Sbjct: 81 HHGPLYLYVTLHEFINEAKQFLKDNPSETI 110
>pdb|2YA1|A Chain A, Product Complex Of A Multi-Modular Glycogen-Degrading
Pneumococcal Virulence Factor Spua
Length = 1014
Score = 27.3 bits (59), Expect = 5.5, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 97 LKDDETIIVTEPEYIHDL 114
LKDD+ I T P Y+HD+
Sbjct: 208 LKDDDESIYTNPYYVHDI 225
>pdb|2J44|A Chain A, Alpha-Glucan Binding By A Streptococcal Virulence Factor
Length = 217
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 86 YINTILSPNAQ--LKDDETIIVTEPEYIHD 113
Y T L ++Q LKDD+ I T P Y+HD
Sbjct: 188 YKFTDLKNHSQIFLKDDDESIYTNPYYVHD 217
>pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b
pdb|2IYE|C Chain C, Structure Of Catalytic Cpx-atpase Domain Copb-b
Length = 263
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 26 VLMGADREAAVEELTESLNFEIALANISLPQEERRNATKL 65
+++ D+E V+EL++ LN + +N+S P+++ R KL
Sbjct: 156 IILSGDKEDKVKELSKELNIQEYYSNLS-PEDKVRIIEKL 194
>pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ4|B Chain B, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ5|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ5|B Chain B, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ6|A Chain A, Conformational Changes In The Catalytic Domain Of The
Cpx-Atpase Copb-B Upon Nucleotide Binding
pdb|2YJ6|B Chain B, Conformational Changes In The Catalytic Domain Of The
Cpx-Atpase Copb-B Upon Nucleotide Binding
Length = 263
Score = 26.6 bits (57), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 26 VLMGADREAAVEELTESLNFEIALANISLPQEERRNATKL 65
+++ D+E V+EL++ LN + +N+S P+++ R KL
Sbjct: 156 IILSGDKEDKVKELSKELNIQEYYSNLS-PEDKVRIIEKL 194
>pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx-
Atpase Copb-B Upon Nucleotide Binding
Length = 263
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 26 VLMGADREAAVEELTESLNFEIALANISLPQEERRNATKL 65
+++ D+E V+EL++ LN + +N+S P+++ R KL
Sbjct: 156 IILSGDKEDKVKELSKELNIQEYYSNLS-PEDKVRIIEKL 194
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,003,855
Number of Sequences: 62578
Number of extensions: 183727
Number of successful extensions: 471
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 462
Number of HSP's gapped (non-prelim): 31
length of query: 182
length of database: 14,973,337
effective HSP length: 93
effective length of query: 89
effective length of database: 9,153,583
effective search space: 814668887
effective search space used: 814668887
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)