Query psy8609
Match_columns 182
No_of_seqs 103 out of 1055
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 23:11:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8609.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8609hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zuk_A Endopeptidase, peptidas 100.0 2.7E-34 9.1E-39 248.4 17.2 177 3-182 198-376 (699)
2 3dwb_A ECE-1, endothelin-conve 100.0 6.1E-34 2.1E-38 246.2 15.5 173 9-182 173-347 (670)
3 1r1h_A Neprilysin; enkephalina 100.0 5.2E-32 1.8E-36 235.2 17.1 179 4-182 177-369 (696)
4 2a3d_A Protein (de novo three- 62.1 11 0.00037 21.4 3.4 35 19-53 12-46 (73)
5 2lmd_A Prospero homeobox prote 46.4 15 0.00053 25.3 2.8 102 65-181 48-157 (174)
6 1mij_A Protein prospero; homeo 44.9 20 0.00068 24.3 3.1 102 65-181 35-144 (152)
7 2i39_A Protein N1, N1L protein 25.6 31 0.0011 23.2 1.6 13 123-135 22-34 (137)
8 2xtc_A F-box-like/WD repeat-co 23.8 35 0.0012 21.3 1.5 24 126-155 7-30 (90)
9 2rdc_A Uncharacterized protein 19.8 1.2E+02 0.0042 20.4 3.6 51 11-61 21-79 (153)
10 3te3_A Polycystic kidney disea 19.5 1.1E+02 0.0038 15.8 3.3 24 30-53 4-27 (39)
No 1
>3zuk_A Endopeptidase, peptidase family M13; hydrolase-inhibitor complex, pathogenicity, phagosome matura; HET: RDF 211 PGE PG4; 2.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.7e-34 Score=248.35 Aligned_cols=177 Identities=20% Similarity=0.328 Sum_probs=165.4
Q ss_pred CcccCCCcHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHhhccCChHhhcchhhhcCccCHHHHHhhCCCC
Q psy8609 3 SSTLAGLDEKIVRAYYKYMLDIAVLM-GADREAAVEELTESLNFEIALANISLPQEERRNATKLYNPMKISELQERYPSI 81 (182)
Q Consensus 3 ~~~~~~~~~~~~~~y~~~i~~~~~~~-g~~~~~~~~~~~~i~~fE~~la~~~~~~~~~~~~~~~~~~~t~~~l~~~~p~i 81 (182)
+||.++...+.+.+|+++|.+++.++ |.+++.+.+.+++|++||++||+++.+.+++||+.++||++|+++|++.+|.+
T Consensus 198 ~yY~~~~~~~~~~aY~~~i~~~l~l~~G~~~~~a~~~a~~v~~fE~~LA~~~~~~~e~rd~~~~yn~~tl~eL~~~~p~i 277 (699)
T 3zuk_A 198 SYYRDEQHAAVLAAYPGHIARMFGLVYGGESRDHAKTADRIVALETKLADAHWDVVKRRDADLGYNLRTFAQLQTEGAGF 277 (699)
T ss_dssp GGGTCGGGHHHHHHHHHHHHHHHHHHHSSCGGGGHHHHHHHHHHHHHHHHHSCCHHHHTCTTTTCCEEEHHHHHHHTTTS
T ss_pred HHhcChhHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcCCHHHhcCchhccCCCcHHHHHHhCCCC
Confidence 67777788999999999999999999 99888899999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhcCCCCCCCCCCeEEEcChHHHHHHHHHHccCChhHHhHHHHHHHHHHHHhhhhHHHHHHHHHH-HHhhCCC
Q psy8609 82 PWTEYINTILSPNAQLKDDETIIVTEPEYIHDLEKLLSTTPKRTMANYVMWRVTAASVGFFTEAIGARRLAF-ITAVTGV 160 (182)
Q Consensus 82 ~w~~~l~~l~~~~~~~~~~~~i~v~~~~y~~~l~~ll~~t~~~~l~nYl~~~~i~~~~~~l~~~~~~~~~~~-~~~~~g~ 160 (182)
||..||+.++.. ....+.|+|.+|+||++|.+++.++++++|+|||+|+++.+++++|+.+++++.++| .++++|.
T Consensus 278 dw~~~l~~~~~~---~~~~~~Viv~~p~yl~~l~~ll~~t~~~~l~nYl~~~~i~~~a~~Ls~~~~~~~~~Fy~~~l~G~ 354 (699)
T 3zuk_A 278 DWVSWVTALGSA---PDAMTELVVRQPDYLVTFASLWASVNVEDWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGA 354 (699)
T ss_dssp CHHHHHHHHTCC---TTTCSEEEESCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHTHHHHCC
T ss_pred CHHHHHHHhCCC---CCCCceEEECCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCC
Confidence 999999998533 222589999999999999999999999999999999999999999999999999995 7999999
Q ss_pred CCCchhHhhHHHHHhcccccCC
Q psy8609 161 SEEEARWKECVGRVKGGFSLAI 182 (182)
Q Consensus 161 ~~~~~r~~~C~~~v~~~~~~~l 182 (182)
++..|||+.|+..|++.||+++
T Consensus 355 ~~~~~rwk~Cv~~v~~~l~~al 376 (699)
T 3zuk_A 355 QQLRDRWKRGVSLVENLMGDAV 376 (699)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999864
No 2
>3dwb_A ECE-1, endothelin-converting enzyme 1; protein, disease mutation, glycoprotein, hirschsprung diseas hydrolase, membrane, metal-binding; HET: 5HD RDF; 2.38A {Homo sapiens} SCOP: d.92.1.0
Probab=100.00 E-value=6.1e-34 Score=246.20 Aligned_cols=173 Identities=31% Similarity=0.664 Sum_probs=155.2
Q ss_pred CcHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHhhccCChHhhcchhhhcCccCHHHHHhhCCCCCHHHHH
Q psy8609 9 LDEKIVRAYYKYMLDIAVLMGA-DREAAVEELTESLNFEIALANISLPQEERRNATKLYNPMKISELQERYPSIPWTEYI 87 (182)
Q Consensus 9 ~~~~~~~~y~~~i~~~~~~~g~-~~~~~~~~~~~i~~fE~~la~~~~~~~~~~~~~~~~~~~t~~~l~~~~p~i~w~~~l 87 (182)
...+.+++|++++.+++.++|. +++.+.+.+++|++||++||+++.+.+++||+.++||++|+++|++.+|++||..||
T Consensus 173 ~~~~~~~~y~~~~~~l~~~~g~~~~~~a~~~a~~v~~fE~~La~~~~~~~~~rd~~~~y~~~t~~eL~~~~p~i~w~~~l 252 (670)
T 3dwb_A 173 ENEKVLTGYLNYMVQLGKLLGGGDEEAIRPQMQQILDFETALANITIPQEKRRDEELIYHKVTAAELQTLAPAINWLPFL 252 (670)
T ss_dssp TSCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCCGGGGSCHHHHCEEEEHHHHHHHSTTSCHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHhhcCCHHHhcCchhccCCCcHHHHHHhCCCCCHHHHH
Confidence 4667899999999999999998 888899999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCeEEEcChHHHHHHHHHHccCChhHHhHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhCCCC-CCchh
Q psy8609 88 NTILSPNAQLKDDETIIVTEPEYIHDLEKLLSTTPKRTMANYVMWRVTAASVGFFTEAIGARRLAFITAVTGVS-EEEAR 166 (182)
Q Consensus 88 ~~l~~~~~~~~~~~~i~v~~~~y~~~l~~ll~~t~~~~l~nYl~~~~i~~~~~~l~~~~~~~~~~~~~~~~g~~-~~~~r 166 (182)
+.++++ .+++..+.|+|.+|+||++|..++.++++++|+|||+|+++.+++++|+.+++++.++|.++++|.+ +..||
T Consensus 253 ~~~~~~-~~~~~~~~v~v~~~~yl~~l~~ll~~t~~~~l~nYl~~~~i~~~~~~L~~~~~~~~~~f~~~l~G~~~~~~~r 331 (670)
T 3dwb_A 253 NTIFYP-VEINESEPIVVYDKEYLEQISTLINTTDRCLLNNYMIWNLVRKTSSFLDQRFQDADEKFMEVMYGTKKTSLPR 331 (670)
T ss_dssp HHHSTT-SCCCTTCEEEESCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHTTC----------
T ss_pred HHHccc-cCCCCCCeEEEcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCcccccH
Confidence 999876 3555678999999999999999999999999999999999999999999999999999999999998 78899
Q ss_pred HhhHHHHHhcccccCC
Q psy8609 167 WKECVGRVKGGFSLAI 182 (182)
Q Consensus 167 ~~~C~~~v~~~~~~~l 182 (182)
|+.|+..|++.||+++
T Consensus 332 ~~~C~~~v~~~l~~a~ 347 (670)
T 3dwb_A 332 WKFCVSDTENNLGFAL 347 (670)
T ss_dssp CTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999864
No 3
>1r1h_A Neprilysin; enkephalinase, glycoprotein, metalloprotease, hydrolase; HET: NAG BIR; 1.95A {Homo sapiens} SCOP: d.92.1.4 PDB: 1dmt_A* 1r1i_A* 1r1j_A* 1y8j_A* 2qpj_A* 2yb9_A*
Probab=99.98 E-value=5.2e-32 Score=235.17 Aligned_cols=179 Identities=26% Similarity=0.527 Sum_probs=164.8
Q ss_pred ccc-CCCcHHHHHHHHHHHHHHHHHh-C-----CCHHHHHHHHHHHHHHHHHHhhccCChHhhcchhhhcCccCHHHHHh
Q psy8609 4 STL-AGLDEKIVRAYYKYMLDIAVLM-G-----ADREAAVEELTESLNFEIALANISLPQEERRNATKLYNPMKISELQE 76 (182)
Q Consensus 4 ~~~-~~~~~~~~~~y~~~i~~~~~~~-g-----~~~~~~~~~~~~i~~fE~~la~~~~~~~~~~~~~~~~~~~t~~~l~~ 76 (182)
||. ++.+.+.+.+|++++.+++.++ | .+++.+.+.+++|++||++||+++.+.+++||+.+.||++|+++|++
T Consensus 177 yy~~~~~~~~~~~~y~~~~~~~~~~~~g~~~~~~~~~~~~~~a~~v~~~E~~La~~~~~~~~~rd~~~~y~~~t~~el~~ 256 (696)
T 1r1h_A 177 YYECTGIYKEACTAYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPEDRNDPMLLYNKMTLAQIQN 256 (696)
T ss_dssp GGGCSGGGHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCGGGSCCHHHHCCEEEHHHHHH
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHhcCCccCCCChHHHHHHHHHHHHHHHHHHHhcCChhhccCHHHhcCcccHHHHHH
Confidence 554 3456788999999999999999 9 88878888999999999999999999999999999999999999999
Q ss_pred hCCC------CCHHHHHHHhcCCC-CCCCCCCeEEEcChHHHHHHHHHHccCChhHHhHHHHHHHHHHHHhhhhHHHHHH
Q psy8609 77 RYPS------IPWTEYINTILSPN-AQLKDDETIIVTEPEYIHDLEKLLSTTPKRTMANYVMWRVTAASVGFFTEAIGAR 149 (182)
Q Consensus 77 ~~p~------i~w~~~l~~l~~~~-~~~~~~~~i~v~~~~y~~~l~~ll~~t~~~~l~nYl~~~~i~~~~~~l~~~~~~~ 149 (182)
.+|. +||..||+.++++. +.++..+.|+|.+|+||++|..++.++++++|+|||+||++.+++++|+.+++++
T Consensus 257 ~~p~~~~~~~~~w~~~l~~~~~~~~~~~~~~~~v~v~~p~yl~~l~~ll~~t~~~~l~nYl~~~~~~~~~~~L~~~~~~~ 336 (696)
T 1r1h_A 257 NFSLEINGKPFSWLNFTNEIMSTVNISITNEEDVVVYAPEYLTKLKPILTKYSARDLQNLMSWRFIMDLVSSLSRTYKES 336 (696)
T ss_dssp HSCCCSSSSCCCHHHHHHHHHGGGTCCCCTTCEEEESCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHGGGSCHHHHHT
T ss_pred hCCCccccCccCHHHHHHHhccccccccCCCCeEEEcCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 9999 99999999998541 1255568999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCchhHhhHHHHHhcccccCC
Q psy8609 150 RLAFITAVTGVSEEEARWKECVGRVKGGFSLAI 182 (182)
Q Consensus 150 ~~~~~~~~~g~~~~~~r~~~C~~~v~~~~~~~l 182 (182)
.++|.++++|.++..|||+.|+..|++.||+++
T Consensus 337 ~~~f~~~l~G~~~~~~r~~~Cv~~v~~~l~~a~ 369 (696)
T 1r1h_A 337 RNAFRKALYGTTSETATWRRCANYVNGNMENAV 369 (696)
T ss_dssp THHHHHHHHCCSSCCCHHHHHHHHHHHHSHHHH
T ss_pred HHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999863
No 4
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=62.14 E-value=11 Score=21.37 Aligned_cols=35 Identities=14% Similarity=0.065 Sum_probs=27.4
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhcc
Q psy8609 19 KYMLDIAVLMGADREAAVEELTESLNFEIALANIS 53 (182)
Q Consensus 19 ~~i~~~~~~~g~~~~~~~~~~~~i~~fE~~la~~~ 53 (182)
.-++.-++.+|.++.+....-.+|..||..|..+.
T Consensus 12 aaiktrlqalggseaelaafekeiaafeselqayk 46 (73)
T 2a3d_A 12 AAIKTRLQALGGSEAELAAFEKEIAAFESELQAYK 46 (73)
T ss_dssp HHHHHHHHHCSSGGGTHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 44566688899888777788889999999987654
No 5
>2lmd_A Prospero homeobox protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transcription; NMR {Homo sapiens}
Probab=46.42 E-value=15 Score=25.32 Aligned_cols=102 Identities=12% Similarity=0.206 Sum_probs=57.4
Q ss_pred hcCccCHHHHHhhCCCC------CHHHHHHHhcCCCCCCCCCCeEEE-cChHHHHHHHHHHccCC-hhHHhHHHHHHHHH
Q psy8609 65 LYNPMKISELQERYPSI------PWTEYINTILSPNAQLKDDETIIV-TEPEYIHDLEKLLSTTP-KRTMANYVMWRVTA 136 (182)
Q Consensus 65 ~~~~~t~~~l~~~~p~i------~w~~~l~~l~~~~~~~~~~~~i~v-~~~~y~~~l~~ll~~t~-~~~l~nYl~~~~i~ 136 (182)
..|+...+||-+.+.++ .-+.|-+..... |+...+.+.| .+.+-|+.|+-=.+..+ .++=.+++..
T Consensus 48 kFnr~~TsQLiKWFSNFREFyYIQMEKfARQa~se--Gv~~~~dl~V~rdsEL~R~LN~HYNk~N~~evP~~F~~v---- 121 (174)
T 2lmd_A 48 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAIND--GVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEV---- 121 (174)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCSCGGGSSSSCTTHHHHHHHHHHCSSCSTTCCHHHHHH----
T ss_pred hhhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHc--cCCCHHHeeecchHHHHHHHHhhccccCCCcCcHHHHHH----
Confidence 34555566666644322 334444444444 6666555555 67878888888776644 3333333321
Q ss_pred HHHhhhhHHHHHHHHHHHHhhCCCCCCchhHhhHHHHHhcccccC
Q psy8609 137 ASVGFFTEAIGARRLAFITAVTGVSEEEARWKECVGRVKGGFSLA 181 (182)
Q Consensus 137 ~~~~~l~~~~~~~~~~~~~~~~g~~~~~~r~~~C~~~v~~~~~~~ 181 (182)
.+....+|..++...+...|-|+..+-.+..-|..+
T Consensus 122 ---------~~~tLrEFf~aI~~GkD~e~sWKK~IYKvI~kLD~~ 157 (174)
T 2lmd_A 122 ---------AQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 157 (174)
T ss_dssp ---------HHHHHHHHHHHHHHTCTTSTHHHHHHHHHHHTTCSS
T ss_pred ---------HHHHHHHHHHHHhcCCcCCchHHHHHHHHHHHcccc
Confidence 112234565555444445689999988887665543
No 6
>1mij_A Protein prospero; homeodomain, DNA-binding domain, prospero domain, 4-helix bundle, transcription; HET: MSE; 2.05A {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 1xpx_A
Probab=44.90 E-value=20 Score=24.28 Aligned_cols=102 Identities=14% Similarity=0.297 Sum_probs=51.7
Q ss_pred hcCccCHHHHHhhCCC------CCHHHHHHHhcCCCCCCCCCCeEEE-cChHHHHHHHHHHccCC-hhHHhHHHHHHHHH
Q psy8609 65 LYNPMKISELQERYPS------IPWTEYINTILSPNAQLKDDETIIV-TEPEYIHDLEKLLSTTP-KRTMANYVMWRVTA 136 (182)
Q Consensus 65 ~~~~~t~~~l~~~~p~------i~w~~~l~~l~~~~~~~~~~~~i~v-~~~~y~~~l~~ll~~t~-~~~l~nYl~~~~i~ 136 (182)
..|+...+||-+.+.+ |.-+.|-+..... |+...+.+.| .+.+-++.|+-=.+..+ .++=.+++..
T Consensus 35 kFnr~~TsQLiKWFSNFREFyYIQMEKfARQa~se--Gv~~~~~l~V~rdsEl~r~LN~HYNk~N~~evP~~Fl~v---- 108 (152)
T 1mij_A 35 KFNKNNTAQLVKWFSNFREFYYIQMEKYARQAVTE--GIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFV---- 108 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------CHHHHHHHHHHCTTCCSCCCHHHHHH----
T ss_pred hhhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHc--ccCCHHHeeecchHHHHHHHHhhhcccCCCcCcHHHHHH----
Confidence 4555666676665433 2334444554544 6666555655 67778888887776543 3333333321
Q ss_pred HHHhhhhHHHHHHHHHHHHhhCCCCCCchhHhhHHHHHhcccccC
Q psy8609 137 ASVGFFTEAIGARRLAFITAVTGVSEEEARWKECVGRVKGGFSLA 181 (182)
Q Consensus 137 ~~~~~l~~~~~~~~~~~~~~~~g~~~~~~r~~~C~~~v~~~~~~~ 181 (182)
.+....||..++...+...|-|+..+-.+..-|...
T Consensus 109 ---------~~~tlrEFf~ai~~GkD~~~sWKK~IYKiI~kLD~~ 144 (152)
T 1mij_A 109 ---------VESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDP 144 (152)
T ss_dssp ---------HHHHHHHHHHHHHTTGGGSTTTTHHHHHHHHTCCCC
T ss_pred ---------HHHHHHHHHHHHhcCCcCCchHHHHHHHHHHHcccc
Confidence 122334666666544556689999988887666543
No 7
>2i39_A Protein N1, N1L protein; all alpha, viral protein; 2.20A {Vaccinia virus} PDB: 2uxe_A
Probab=25.57 E-value=31 Score=23.24 Aligned_cols=13 Identities=23% Similarity=0.869 Sum_probs=10.4
Q ss_pred hhHHhHHHHHHHH
Q psy8609 123 KRTMANYVMWRVT 135 (182)
Q Consensus 123 ~~~l~nYl~~~~i 135 (182)
...|++|++||=-
T Consensus 22 ~~iL~~YI~wRg~ 34 (137)
T 2i39_A 22 RTLLIRYILWRND 34 (137)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcC
Confidence 4679999999944
No 8
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=23.75 E-value=35 Score=21.31 Aligned_cols=24 Identities=17% Similarity=0.329 Sum_probs=16.7
Q ss_pred HhHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy8609 126 MANYVMWRVTAASVGFFTEAIGARRLAFIT 155 (182)
Q Consensus 126 l~nYl~~~~i~~~~~~l~~~~~~~~~~~~~ 155 (182)
=.||++||++... -|+..++.|.+
T Consensus 7 evN~LI~RYLqEs------Gf~hsAf~f~~ 30 (90)
T 2xtc_A 7 EVNFLVYRYLQES------GFSHSAFTFGI 30 (90)
T ss_dssp HHHHHHHHHHHHT------TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHc------CCHHHHHHHHH
Confidence 3689999998743 35666667753
No 9
>2rdc_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Geobacter sulfurreducens pca}
Probab=19.81 E-value=1.2e+02 Score=20.39 Aligned_cols=51 Identities=24% Similarity=0.256 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHH------HHHhCCCHHHHHHHHHHHHHHHHHHhh--ccCChHhhcc
Q psy8609 11 EKIVRAYYKYMLDI------AVLMGADREAAVEELTESLNFEIALAN--ISLPQEERRN 61 (182)
Q Consensus 11 ~~~~~~y~~~i~~~------~~~~g~~~~~~~~~~~~i~~fE~~la~--~~~~~~~~~~ 61 (182)
+..+.-|++.+..+ +.++..--+.+.+.+..++.||..++. +....++.|+
T Consensus 21 e~~m~r~k~v~s~~~~D~v~l~iiE~lids~~~Y~~~V~~mE~~i~t~RfrlEgeEYRd 79 (153)
T 2rdc_A 21 ETTMGRYKKVIEITGHDEVAAKLLEGLIDAGTRYFSKVVEMEHRMASARFRLDGEELRE 79 (153)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 34566677643331 112211124567788899999999864 4566555443
No 10
>3te3_A Polycystic kidney disease 2-like 1 protein; trimeric coiled-coil, oligomerization domain, C-terminal CYT regulatory domain, metal transport; 2.69A {Homo sapiens}
Probab=19.49 E-value=1.1e+02 Score=15.82 Aligned_cols=24 Identities=17% Similarity=0.130 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhcc
Q psy8609 30 ADREAAVEELTESLNFEIALANIS 53 (182)
Q Consensus 30 ~~~~~~~~~~~~i~~fE~~la~~~ 53 (182)
.+.+++...+.++..+|..|..+.
T Consensus 4 Vs~eeF~~L~rRVlqlE~~l~gI~ 27 (39)
T 3te3_A 4 VSGEEFYMLTRRVLQLETVLEGVV 27 (39)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888899999999999887664
Done!