RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8609
         (182 letters)



>d1dmta_ d.92.1.4 (A:) Neutral endopeptidase (neprilysin) {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 696

 Score =  116 bits (291), Expect = 3e-31
 Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 13/188 (6%)

Query: 8   GLDEKIVRAYYKYMLDIAVLMGA------DREAAVEELTESLNFEIALANISLPQEERRN 61
           G+ ++   AY  +M+ +A L+        D      E+ + +  E  +AN +   E+R +
Sbjct: 182 GIYKEACTAYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPEDRND 241

Query: 62  ATKLYNPMKISELQERY------PSIPWTEYINTILSP-NAQLKDDETIIVTEPEYIHDL 114
              LYN M ++++Q  +          W  + N I+S  N  + ++E ++V  PEY+  L
Sbjct: 242 PMLLYNKMTLAQIQNNFSLEINGKPFSWLNFTNEIMSTVNISITNEEDVVVYAPEYLTKL 301

Query: 115 EKLLSTTPKRTMANYVMWRVTAASVGFFTEAIGARRLAFITAVTGVSEEEARWKECVGRV 174
           + +L+    R + N + WR     V   +      R AF  A+ G + E A W+ C   V
Sbjct: 302 KPILTKYSARDLQNLMSWRFIMDLVSSLSRTYKESRNAFRKALYGTTSETATWRRCANYV 361

Query: 175 KGGFSLAI 182
            G    A+
Sbjct: 362 NGNMENAV 369


>d2icya1 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2
          (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId:
          3702]}
          Length = 83

 Score = 23.5 bits (51), Expect = 7.2
 Identities = 5/13 (38%), Positives = 8/13 (61%)

Query: 70 KISELQERYPSIP 82
          K++    R+ SIP
Sbjct: 19 KVATFLSRFKSIP 31


>d1n8fa_ c.1.10.4 (A:) 3-deoxy-D-arabino-heptulosonate-7-phosphate
           synthase (DAHP synthase, AroG) {Escherichia coli,
           phenylalanine-regulated isozyme [TaxId: 562]}
          Length = 343

 Score = 24.8 bits (54), Expect = 7.7
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 4/31 (12%)

Query: 85  EYINTILSPNAQLKDDETIIVTEPEYIHDLE 115
           + I+ IL       DD  ++V  P  IHD  
Sbjct: 34  KAIHKILKG----NDDRLLVVIGPCSIHDPV 60


>d1of8a_ c.1.10.4 (A:) 3-deoxy-D-arabino-heptulosonate-7-phosphate
           synthase (DAHP synthase, AroG) {Baker's yeast
           (Saccharomyces cerevisiae), tyrosine-regulated isozyme
           [TaxId: 4932]}
          Length = 346

 Score = 24.4 bits (53), Expect = 9.4
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 12/52 (23%)

Query: 72  SELQERYPSIP--------WTEYINTILSPNAQLKDDETIIVTEPEYIHDLE 115
           + LQ + P+ P               I++     KDD  +++  P  IHDLE
Sbjct: 13  ALLQVQIPATPTSLETAKRGRREAIDIITG----KDDRVLVIVGPCSIHDLE 60


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.131    0.370 

Gapped
Lambda     K      H
   0.267   0.0688    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 664,118
Number of extensions: 28882
Number of successful extensions: 111
Number of sequences better than 10.0: 1
Number of HSP's gapped: 109
Number of HSP's successfully gapped: 7
Length of query: 182
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 102
Effective length of database: 1,309,196
Effective search space: 133537992
Effective search space used: 133537992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.1 bits)