RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8613
         (191 letters)



>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 338

 Score = 79.0 bits (194), Expect = 2e-18
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 17/149 (11%)

Query: 44  AATNTQIIGRPTALLILDML---GCPCSGIR-----------GQRCAEQGVQIGRITGLD 89
           A+ NT+++G   A L+  +    G     +            G+        +GRITGLD
Sbjct: 119 ASYNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLD 178

Query: 90  PASPLFRQLLATSLVSLNSGDAHYVDVIHSDGARHWSE-GLGLFEAIGHSDYFPNGGLDQ 148
           PA P F+       V L+  DA +VDVIH+D A      G G+ + +GH D+FPNGG + 
Sbjct: 179 PAEPCFQG--LPEEVRLDPSDAMFVDVIHTDSAPIIPYLGFGMSQKVGHLDFFPNGGKEM 236

Query: 149 PGCEHKKNAVLVSHLEKTPQMQRQSAVEH 177
           PGC+    + +V         Q   A  H
Sbjct: 237 PGCQKNILSTIVDINGIWEGTQNFVACNH 265


>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
           {Dog (Canis familiaris) [TaxId: 9615]}
          Length = 337

 Score = 73.3 bits (179), Expect = 2e-16
 Identities = 38/92 (41%), Positives = 49/92 (53%), Gaps = 7/92 (7%)

Query: 63  LGCPCSGIRGQRCAEQGVQIGRITGLDPASPLFRQLLATSLVSLNSGDAHYVDVIHSDGA 122
           LG   +G  G R       +GRITGLDP    F+       V L+  DA +VDVIH+D A
Sbjct: 155 LGAHVAGEAGSRT----PGLGRITGLDPVEASFQG--TPEEVRLDPTDADFVDVIHTDAA 208

Query: 123 RHWSE-GLGLFEAIGHSDYFPNGGLDQPGCEH 153
                 G G  + +GH D+FPNGG + PGC+ 
Sbjct: 209 PLIPFLGFGTSQQMGHLDFFPNGGEEMPGCKK 240


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.136    0.422 

Gapped
Lambda     K      H
   0.267   0.0637    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 707,695
Number of extensions: 30018
Number of successful extensions: 50
Number of sequences better than 10.0: 1
Number of HSP's gapped: 46
Number of HSP's successfully gapped: 3
Length of query: 191
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 111
Effective length of database: 1,309,196
Effective search space: 145320756
Effective search space used: 145320756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.2 bits)