RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8614
         (199 letters)



>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 338

 Score =  133 bits (336), Expect = 8e-39
 Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 29/214 (13%)

Query: 4   LVLSWVDFGYPQDNSHC-GFSLGAHVAGYAGRGVQNKGFKIGRILGLDPASPLFRQLLAT 62
           + +   + GY  +N H  G SLGAHV G AGR ++     +GRI GLDPA P F+     
Sbjct: 134 VQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLE---GHVGRITGLDPAEPCFQG--LP 188

Query: 63  SLVSLNSGDAHYVDVIHSDGARHWSE-GLGLFEAIGHSDYFPNGGLDQPGCEHK--KNAV 119
             V L+  DA +VDVIH+D A      G G+ + +GH D+FPNGG + PGC+       V
Sbjct: 189 EEVRLDPSDAMFVDVIHTDSAPIIPYLGFGMSQKVGHLDFFPNGGKEMPGCQKNILSTIV 248

Query: 120 LVSHLEGTMNSSVVCNHIRAWKLFYESLKMSKREDGCKFFAFHCP----------GGLKN 169
            ++ +     + V CNH+R++K +  S+      +   F  + C                
Sbjct: 249 DINGIWEGTQNFVACNHLRSYKYYASSIL-----NPDGFLGYPCSSYEKFQQNDCFPCPE 303

Query: 170 GSCGMMGYGSEESK-----ARGALYLVTRDTAPY 198
             C  MG+ +++ +         +YL T D+  +
Sbjct: 304 EGCPKMGHYADQFEGKTATVEQTVYLNTGDSGNF 337


>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
           {Dog (Canis familiaris) [TaxId: 9615]}
          Length = 337

 Score =  132 bits (332), Expect = 4e-38
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 30/214 (14%)

Query: 4   LVLSWVDFGYPQDNSHC-GFSLGAHVAGYAGRGVQNKGFKIGRILGLDPASPLFRQLLAT 62
           L +   ++ Y        G SLGAHVAG AG     +   +GRI GLDP    F+     
Sbjct: 134 LSMLSANYSYSPSQVQLIGHSLGAHVAGEAGS----RTPGLGRITGLDPVEASFQG--TP 187

Query: 63  SLVSLNSGDAHYVDVIHSDGARHWSE-GLGLFEAIGHSDYFPNGGLDQPGCEHKKNAVLV 121
             V L+  DA +VDVIH+D A      G G  + +GH D+FPNGG + PGC+    + +V
Sbjct: 188 EEVRLDPTDADFVDVIHTDAAPLIPFLGFGTSQQMGHLDFFPNGGEEMPGCKKNALSQIV 247

Query: 122 SH--LEGTMNSSVVCNHIRAWKLFYESLKMSKREDGCKFFAFHCPG----------GLKN 169
               +       V CNH+R++K + ES+      +   F ++ C               +
Sbjct: 248 DLDGIWEGTRDFVACNHLRSYKYYSESIL-----NPDGFASYPCASYRAFESNKCFPCPD 302

Query: 170 GSCGMMGYGSEE-----SKARGALYLVTRDTAPY 198
             C  MG+ +++     S      +L T D++ +
Sbjct: 303 QGCPQMGHYADKFAVKTSDETQKYFLNTGDSSNF 336


>d1oe4a_ c.18.1.3 (A:) Single-strand selective monofunctional
           uracil-DNA glycosylase SMUG1 {African clawed frog
           (Xenopus laevis) [TaxId: 8355]}
          Length = 245

 Score = 25.6 bits (56), Expect = 4.6
 Identities = 15/66 (22%), Positives = 20/66 (30%), Gaps = 5/66 (7%)

Query: 104 NGGLDQPGCEHKKNAVLVSHLEGTMNSSVVCNHIRAWKLFYESLKMSKREDGCKFFAFHC 163
            G + +P  EH K  +       +  S       R W LF       +      F   HC
Sbjct: 87  EGPVSKPEVEHPKRRIRGFECPQSEVSGA-----RFWSLFKSLCGQPETFFKHCFVHNHC 141

Query: 164 PGGLKN 169
           P    N
Sbjct: 142 PLIFMN 147


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.139    0.447 

Gapped
Lambda     K      H
   0.267   0.0501    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 766,591
Number of extensions: 33516
Number of successful extensions: 81
Number of sequences better than 10.0: 1
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 5
Length of query: 199
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 118
Effective length of database: 1,295,466
Effective search space: 152864988
Effective search space used: 152864988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.6 bits)