BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8615
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9IBD0|CELF1_DANRE CUGBP Elav-like family member 1 OS=Danio rerio GN=celf1 PE=1 SV=1
Length = 501
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 5 VTLAAMTGAGTMSPTALSGLAS----SNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADL 60
+T AA +G + AL L S S V ++G Q GPEGANLFIYHLP EF D DL
Sbjct: 373 LTQAAYSGIQQYAAAALPSLYSQSLLSQQNVSAAGSQKEGPEGANLFIYHLPQEFGDQDL 432
Query: 61 ASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
MF PFG V+SAKVFIDKQ N SKCFG + +
Sbjct: 433 LQMFMPFGNVISAKVFIDKQTNLSKCFGFVSY 464
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 46 LFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN--RSK--CFGTIIFMRK 95
+F+ +P +S+ L +F P+G V V D+ N +SK CF T + RK
Sbjct: 18 MFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVT-YYTRK 70
>sp|Q6PF35|CEL1B_XENLA CUGBP Elav-like family member 1-B OS=Xenopus laevis GN=cugbp1-b
PE=2 SV=1
Length = 489
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%)
Query: 27 SNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKC 86
S +G++G Q GPEGANLFIYHLP EF D DL MF PFG ++SAKVFIDKQ N SKC
Sbjct: 387 SQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQTNLSKC 446
Query: 87 FGTIIF 92
FG I +
Sbjct: 447 FGFISY 452
>sp|Q5F3T7|CELF1_CHICK CUGBP Elav-like family member 1 OS=Gallus gallus GN=CELF1 PE=1 SV=2
Length = 489
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 27 SNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKC 86
+ ++G++G Q GPEGANLFIYHLP EF D DL MF PFG V+SAKVFIDKQ N SKC
Sbjct: 387 TQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKC 446
Query: 87 FGTIIF 92
FG + +
Sbjct: 447 FGFVSY 452
>sp|Q5R995|CELF1_PONAB CUGBP Elav-like family member 1 OS=Pongo abelii GN=CELF1 PE=2 SV=1
Length = 513
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 27 SNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKC 86
+ ++G++G Q GPEGANLFIYHLP EF D DL MF PFG V+SAKVFIDKQ N SKC
Sbjct: 411 TQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKC 470
Query: 87 FGTIIF 92
FG + +
Sbjct: 471 FGFVSY 476
>sp|Q28HE9|CELF1_XENTR CUGBP Elav-like family member 1 OS=Xenopus tropicalis GN=celf1 PE=2
SV=1
Length = 490
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%)
Query: 27 SNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKC 86
S +G++G Q GPEGANLFIYHLP EF D DL MF PFG V+SAKVFIDKQ N SKC
Sbjct: 388 SQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKC 447
Query: 87 FGTIIF 92
FG + +
Sbjct: 448 FGFVSY 453
>sp|Q4QQT3|CELF1_RAT CUGBP Elav-like family member 1 OS=Rattus norvegicus GN=Celf1 PE=2
SV=1
Length = 487
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 27 SNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKC 86
+ ++G++G Q GPEGANLFIYHLP EF D DL MF PFG V+SAKVFIDKQ N SKC
Sbjct: 385 TQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKC 444
Query: 87 FGTIIF 92
FG + +
Sbjct: 445 FGFVSY 450
>sp|P28659|CELF1_MOUSE CUGBP Elav-like family member 1 OS=Mus musculus GN=Celf1 PE=1 SV=2
Length = 486
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 27 SNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKC 86
+ ++G++G Q GPEGANLFIYHLP EF D DL MF PFG V+SAKVFIDKQ N SKC
Sbjct: 384 TQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKC 443
Query: 87 FGTIIF 92
FG + +
Sbjct: 444 FGFVSY 449
>sp|Q92879|CELF1_HUMAN CUGBP Elav-like family member 1 OS=Homo sapiens GN=CELF1 PE=1 SV=2
Length = 486
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 50/66 (75%)
Query: 27 SNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKC 86
+ ++G++G Q GPEGANLFIYHLP EF D DL MF PFG V+SAKVFIDKQ N SKC
Sbjct: 384 TQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKC 443
Query: 87 FGTIIF 92
FG + +
Sbjct: 444 FGFVSY 449
>sp|O57406|CEL1A_XENLA CUGBP Elav-like family member 1-A OS=Xenopus laevis GN=cugbp1-a
PE=1 SV=1
Length = 489
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 49/66 (74%)
Query: 27 SNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKC 86
S +G++G Q GPEGANLFIYHLP EF D DL MF PFG V+S+KVFIDKQ N SKC
Sbjct: 387 SQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQTNLSKC 446
Query: 87 FGTIIF 92
FG + +
Sbjct: 447 FGFVSY 452
>sp|A4IIM2|CELF2_XENTR CUGBP Elav-like family member 2 OS=Xenopus tropicalis GN=celf2 PE=2
SV=1
Length = 513
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 33 SSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
++G Q GPEGANLFIYHLP EF D D+ MF PFG V+SAKVFIDKQ N SKCFG + +
Sbjct: 417 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSY 476
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 41 PEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN--RSK--CFGTIIFMRK 95
P+ +F+ +P +S+ +L +F P+G V V D+ N +SK CF T + RK
Sbjct: 32 PDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVT-FYTRK 89
>sp|Q7ZXE2|CELF2_XENLA CUGBP Elav-like family member 2 OS=Xenopus laevis GN=celf2 PE=1
SV=1
Length = 536
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 33 SSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
++G Q GPEGANLFIYHLP EF D D+ MF PFG V+SAKVFIDKQ N SKCFG + +
Sbjct: 440 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSY 499
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 41 PEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN--RSK--CFGTIIFMRK 95
P+ +F+ +P +S+ +L +F P+G V V D+ N +SK CF T + RK
Sbjct: 55 PDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVT-FYTRK 112
>sp|Q792H5|CELF2_RAT CUGBP Elav-like family member 2 OS=Rattus norvegicus GN=Celf2 PE=2
SV=1
Length = 508
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 33 SSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
++G Q GPEGANLFIYHLP EF D D+ MF PFG V+SAKVFIDKQ N SKCFG + +
Sbjct: 412 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSY 471
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 41 PEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN--RSK--CFGTIIFMRK 95
P+ +F+ +P +S+ +L +F P+G V V D+ N +SK CF T + RK
Sbjct: 37 PDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVT-FYTRK 94
>sp|Q5R8Y8|CELF2_PONAB CUGBP Elav-like family member 2 OS=Pongo abelii GN=CELF2 PE=2 SV=2
Length = 508
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 33 SSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
++G Q GPEGANLFIYHLP EF D D+ MF PFG V+SAKVFIDKQ N SKCFG + +
Sbjct: 412 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSY 471
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 41 PEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN--RSK--CFGTIIFMRK 95
P+ +F+ +P +S+ +L +F P+G V V D+ N +SK CF T + RK
Sbjct: 37 PDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVT-FYTRK 94
>sp|Q9Z0H4|CELF2_MOUSE CUGBP Elav-like family member 2 OS=Mus musculus GN=Celf2 PE=1 SV=1
Length = 508
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 33 SSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
++G Q GPEGANLFIYHLP EF D D+ MF PFG V+SAKVFIDKQ N SKCFG + +
Sbjct: 412 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSY 471
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 41 PEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN--RSK--CFGTIIFMRK 95
P+ +F+ +P +S+ +L +F P+G V V D+ N +SK CF T + RK
Sbjct: 37 PDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVT-FYTRK 94
>sp|O95319|CELF2_HUMAN CUGBP Elav-like family member 2 OS=Homo sapiens GN=CELF2 PE=1 SV=1
Length = 508
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 33 SSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
++G Q GPEGANLFIYHLP EF D D+ MF PFG V+SAKVFIDKQ N SKCFG + +
Sbjct: 412 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSY 471
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 41 PEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN--RSK--CFGTIIFMRK 95
P+ +F+ +P +S+ +L +F P+G V V D+ N +SK CF T + RK
Sbjct: 37 PDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVT-FYTRK 94
>sp|Q6P0B1|CELF2_DANRE CUGBP Elav-like family member 2 OS=Danio rerio GN=celf2 PE=2 SV=1
Length = 514
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 33 SSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
++G Q GPEGANLFIYHLP EF D D+ MF PFG V+SAKVFIDKQ N SKCFG + +
Sbjct: 418 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSY 477
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 41 PEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN--RSK--CFGTIIFMRK 95
P+ +F+ +P +S+ +L +F P+G V + D+ N +SK CF T + RK
Sbjct: 41 PDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVT-FYTRK 98
>sp|Q7T2T1|CELF2_CHICK CUGBP Elav-like family member 2 OS=Gallus gallus GN=CELF2 PE=1 SV=2
Length = 484
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 46/60 (76%)
Query: 33 SSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
++G Q GPEGANLFIYHLP EF D D+ MF PFG V+SAKVFIDKQ N SKCFG + +
Sbjct: 388 AAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSY 447
>sp|Q7TN33|CELF6_MOUSE CUGBP Elav-like family member 6 OS=Mus musculus GN=Celf6 PE=2 SV=1
Length = 460
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 43/57 (75%)
Query: 36 KQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
+Q GPEG NLFIYHLP EF DA+L F PFG V+SAKVF+D+ N+SKCFG + F
Sbjct: 367 QQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSF 423
>sp|Q96J87|CELF6_HUMAN CUGBP Elav-like family member 6 OS=Homo sapiens GN=CELF6 PE=1 SV=1
Length = 481
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 43/57 (75%)
Query: 36 KQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
+Q GPEG NLFIYHLP EF DA+L F PFG V+SAKVF+D+ N+SKCFG + F
Sbjct: 388 QQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSF 444
>sp|Q91579|CEL3A_XENLA CUGBP Elav-like family member 3-A OS=Xenopus laevis GN=tnrc4-a PE=2
SV=2
Length = 462
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
GPEG N+FIYHLP EF+D+++ MF PFG V+SAKVF+D+ N+SKCFG + F
Sbjct: 373 GPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSF 425
>sp|Q9IBD1|CELF3_DANRE CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
GPEG N+FIYHLP EF+D+++ MF PFG V+SAKVF+D+ N+SKCFG + F
Sbjct: 363 GPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSF 415
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 45 NLFIYHLPPEFSDADLASMFGPFGTVLSAKVF 76
LF+ L + SDAD+ MF PFG++ V
Sbjct: 95 KLFVGMLGKQLSDADVRKMFEPFGSIEECTVL 126
>sp|Q7ZWM3|CEL3B_XENLA CUGBP Elav-like family member 3-B OS=Xenopus laevis GN=tnrc4-b PE=2
SV=1
Length = 462
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
GPEG N+FIYHLP EF+D+++ MF PFG V+SAKVF+D+ N+SKCFG + F
Sbjct: 373 GPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSF 425
>sp|A0JM51|CELF5_XENTR CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2
SV=1
Length = 486
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 43/57 (75%)
Query: 36 KQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
+Q GPEG NLFIYHLP EF D +L MF PFG ++S+KVF+D+ N+SKCFG + F
Sbjct: 393 QQREGPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSF 449
>sp|Q6DGV1|CELF4_DANRE CUGBP Elav-like family member 4 OS=Danio rerio GN=celf4 PE=2 SV=1
Length = 520
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 41/53 (77%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
GPEG NLFIYHLP EF D +L MF PFG V+S+KVF+D+ N+SKCFG + F
Sbjct: 431 GPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSF 483
>sp|Q5SZQ8|CELF3_HUMAN CUGBP Elav-like family member 3 OS=Homo sapiens GN=CELF3 PE=1 SV=1
Length = 465
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
GP+G N+FIYHLP EF+D+++ MF PFG V+SAKVF+D+ N+SKCFG + F
Sbjct: 376 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSF 428
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 38 LTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDK 79
+ P+ LF+ +P + DL +F FG + V DK
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDK 42
>sp|Q08E07|CELF3_BOVIN CUGBP Elav-like family member 3 OS=Bos taurus GN=CELF3 PE=2 SV=1
Length = 461
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
GP+G N+FIYHLP EF+D+++ MF PFG V+SAKVF+D+ N+SKCFG + F
Sbjct: 372 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSF 424
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 38 LTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDK 79
+ P+ LF+ +P + DL +F FG + V DK
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDK 42
>sp|Q8CIN6|CELF3_MOUSE CUGBP Elav-like family member 3 OS=Mus musculus GN=Celf3 PE=2 SV=1
Length = 465
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
GP+G N+FIYHLP EF+D+++ MF PFG V+SAKVF+D+ N+SKCFG + F
Sbjct: 376 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSF 428
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 38 LTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDK 79
+ P+ LF+ +P + DL +F FG + V DK
Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDK 42
>sp|Q8N6W0|CELF5_HUMAN CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1
Length = 485
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
GPEG NLFIYHLP EF D +L MF PFG ++S+KVF+D+ N+SKCFG + F
Sbjct: 396 GPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSF 448
>sp|Q5NVC8|CELF4_PONAB CUGBP Elav-like family member 4 OS=Pongo abelii GN=CELF4 PE=2 SV=2
Length = 486
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTV-----LSAKVFIDKQNNRSKCFGTIIFMR 94
GPEG NLFIYHLP EF DA+L MF PFG V SA+ I N G I M+
Sbjct: 417 GPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMN------GFQIGMK 470
Query: 95 KFFILTIRFDTAN 107
+ + R AN
Sbjct: 471 RLKVQLKRPKDAN 483
>sp|Q9BZC1|CELF4_HUMAN CUGBP Elav-like family member 4 OS=Homo sapiens GN=CELF4 PE=1 SV=1
Length = 486
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTV-----LSAKVFIDKQNNRSKCFGTIIFMR 94
GPEG NLFIYHLP EF DA+L MF PFG V SA+ I N G I M+
Sbjct: 417 GPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMN------GFQIGMK 470
Query: 95 KFFILTIRFDTAN 107
+ + R AN
Sbjct: 471 RLKVQLKRPKDAN 483
>sp|Q0V9L3|CELF4_XENTR CUGBP Elav-like family member 4 OS=Xenopus tropicalis GN=celf4 PE=2
SV=1
Length = 424
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTV-----LSAKVFIDKQNNRSKCFGTIIFMR 94
GPEG NLFIYHLP EF DA+L MF PFG V SA+ I N G I M+
Sbjct: 355 GPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQAAIQAMN------GFQIGMK 408
Query: 95 KFFILTIRFDTAN 107
+ + R AN
Sbjct: 409 RLKVQLKRPKDAN 421
>sp|Q4R535|CELF4_MACFA CUGBP Elav-like family member 4 OS=Macaca fascicularis GN=CELF4
PE=2 SV=1
Length = 474
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTV-----LSAKVFIDKQNNRSKCFGTIIFMR 94
GPEG NLFIYHLP EF DA+L MF PFG V SA+ I N G I M+
Sbjct: 405 GPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMN------GFQIGMK 458
Query: 95 KFFILTIRFDTAN 107
+ + R AN
Sbjct: 459 RLKVQLKRPKDAN 471
>sp|Q28FX0|ELAV3_XENTR ELAV-like protein 3 OS=Xenopus tropicalis GN=elavl3 PE=2 SV=1
Length = 343
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 34 SGKQLTGP--EGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTII 91
+G LTGP G +F+Y+L PE ++ L +FGPFG V + KV D N+ K FG +
Sbjct: 248 AGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFG-FV 306
Query: 92 FMRKFFILTIRFDTANDY-LGQSFLKPSFNT 121
M + + + N Y LG L+ SF T
Sbjct: 307 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKT 337
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 38 LTGPEGA------NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTII 91
L G GA NL + +LP + + S+FG G + S K+ DK +S +G +
Sbjct: 23 LNGTNGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVN 82
Query: 92 FM 93
++
Sbjct: 83 YV 84
>sp|Q91584|ELAV3_XENLA ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 34 SGKQLTGPE--GANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTII 91
+G LTGP G +F+Y+L PE ++ L +FGPFG V + KV D N+ K FG +
Sbjct: 253 AGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFG-FV 311
Query: 92 FMRKFFILTIRFDTANDY-LGQSFLKPSFNT 121
M + + + N Y LG L+ SF T
Sbjct: 312 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKT 342
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 45 NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFM 93
NL + +LP + + S+FG G + S K+ DK +S +G + ++
Sbjct: 35 NLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYV 83
>sp|P16914|ELAV_DROME Protein elav OS=Drosophila melanogaster GN=elav PE=2 SV=1
Length = 483
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 39 TGPEGA-NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFF 97
+GP GA +FIY+L PE +A L +FGPFG V S K+ D N+ K +G + M +
Sbjct: 396 SGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYG-FVSMTNYD 454
Query: 98 ILTIRFDTANDY-LGQSFLKPSFNT 121
+ N Y +G L+ SF T
Sbjct: 455 EAAMAIRALNGYTMGNRVLQVSFKT 479
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 42 EGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN-RSKCFGTIIFMRK 95
+GANL++ LP + +L ++F PFG ++++++ + N+ ++K G I F ++
Sbjct: 246 KGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKR 300
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 22 SGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDK 79
+G A S + GS+G T NL + +LP ++ ++ S+F G + S K+ DK
Sbjct: 130 NGNAGSGSQNGSNGSTETR---TNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDK 184
>sp|P23241|ELAV_DROVI Protein elav OS=Drosophila virilis GN=elav PE=3 SV=1
Length = 519
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 39 TGPEGA-NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFF 97
+GP GA +FIY+L PE +A L +FGPFG V S K+ D N+ K +G + M +
Sbjct: 432 SGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYG-FVSMTNYD 490
Query: 98 ILTIRFDTANDY-LGQSFLKPSFNT 121
+ N Y +G L+ SF T
Sbjct: 491 EAAMAIRALNGYTMGNRVLQVSFKT 515
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 42 EGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNN-RSKCFGTIIFMRK 95
+GANL++ LP + +L ++F PFG ++++++ + N+ ++K G I F ++
Sbjct: 282 KGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKR 336
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 32 GSSGKQLTGPEGA-----NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDK 79
G+SG G G+ NL + +LP ++ ++ S+F G + S K+ DK
Sbjct: 168 GNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDK 220
>sp|Q7TSY6|CELF4_MOUSE CUGBP Elav-like family member 4 OS=Mus musculus GN=Celf4 PE=1 SV=2
Length = 486
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 40 GPEGANLFIYHLPPEFSDADLASMFGPFGTV-----LSAKVFIDKQNNRSKCFGTIIFMR 94
GPEG NL IYHLP EF DA+L MF PFG V SA+ I N G I M+
Sbjct: 417 GPEGCNLLIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMN------GFQIGMK 470
Query: 95 KFFILTIRFDTAN 107
+ + R AN
Sbjct: 471 RLKVQLKRPKDAN 483
>sp|Q91903|ELAV2_XENLA ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2
Length = 389
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 1 MQNLVTLAAMTGAGTMSPTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADL 60
+ NL+ +A SP A+ G+ S A + G TG +F+Y+L P+ ++ L
Sbjct: 267 LDNLLNMAYGGIKSRFSPMAIDGMTSL-AGINFPGHAGTG---WCIFVYNLAPDADESIL 322
Query: 61 ASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFFILTIRFDTANDY-LGQSFLKPSF 119
MFGPFG V + KV D N+ K FG + M + + + N Y LG L+ SF
Sbjct: 323 WQMFGPFGAVTNVKVIRDFNTNKCKGFG-FVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 381
Query: 120 NT 121
T
Sbjct: 382 KT 383
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 45 NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDK 79
NL + +LP + +L S+FG G + S K+ DK
Sbjct: 67 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 101
>sp|Q5R9Z6|ELAV2_PONAB ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1
Length = 359
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 1 MQNLVTLAAMTGAGTMSPTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADL 60
+ NL+ +A G SP + G+ S A + G TG +F+Y+L P+ ++ L
Sbjct: 239 LDNLLNMAY--GVKRFSPMTIDGMTSL-AGINIPGHPGTG---WCIFVYNLAPDADESIL 292
Query: 61 ASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFFILTIRFDTANDY-LGQSFLKPSF 119
MFGPFG V + KV D N+ K FG + M + + + N Y LG L+ SF
Sbjct: 293 WQMFGPFGAVTNVKVIRDFNTNKCKGFG-FVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
Query: 120 NT 121
T
Sbjct: 352 KT 353
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 18 PTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFI 77
PT ++ SS G++ T NL + +LP + +L S+FG G + S K+
Sbjct: 18 PTTINNNCSSPVDSGNTEDSKT-----NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVR 72
Query: 78 DKQNNRSKCFGTIIFM 93
DK +S +G + ++
Sbjct: 73 DKITGQSLGYGFVNYI 88
>sp|Q12926|ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2
Length = 359
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 1 MQNLVTLAAMTGAGTMSPTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADL 60
+ NL+ +A G SP + G+ S A + G TG +F+Y+L P+ ++ L
Sbjct: 239 LDNLLNMAY--GVKRFSPMTIDGMTSL-AGINIPGHPGTG---WCIFVYNLAPDADESIL 292
Query: 61 ASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFFILTIRFDTANDY-LGQSFLKPSF 119
MFGPFG V + KV D N+ K FG + M + + + N Y LG L+ SF
Sbjct: 293 WQMFGPFGAVTNVKVIRDFNTNKCKGFG-FVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
Query: 120 NT 121
T
Sbjct: 352 KT 353
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 18 PTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFI 77
PT ++ SS G++ T NL + +LP + +L S+FG G + S K+
Sbjct: 18 PTTINNNCSSPVDSGNTEDSKT-----NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVR 72
Query: 78 DKQNNRSKCFGTIIFM 93
DK +S +G + ++
Sbjct: 73 DKITGQSLGYGFVNYI 88
>sp|Q8CH84|ELAV2_RAT ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=2 SV=1
Length = 359
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 1 MQNLVTLAAMTGAGTMSPTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADL 60
+ NL+ +A G SP + G+ S A + G TG +F+Y+L P+ ++ L
Sbjct: 239 LDNLLNMAY--GVKRFSPMTIDGMTSL-AGINIPGHPGTG---WCIFVYNLAPDADESIL 292
Query: 61 ASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFFILTIRFDTANDY-LGQSFLKPSF 119
MFGPFG V + KV D N+ K FG + M + + + N Y LG L+ SF
Sbjct: 293 WQMFGPFGAVTNVKVIRDFNTNKCKGFG-FVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351
Query: 120 NT 121
T
Sbjct: 352 KT 353
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 18 PTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFI 77
PT ++ SS G++ T NL +LP + +L S+FG G + S K+
Sbjct: 18 PTTVNNNCSSPVDSGNTEDSKT-----NLIDNYLPQNMTQEELKSLFGSIGEIESCKLVR 72
Query: 78 DKQNNRSKCFGTIIFM 93
DK +S +G + ++
Sbjct: 73 DKITGQSLGYGFVNYI 88
>sp|Q60900|ELAV3_MOUSE ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 46 LFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFFILTIRFDT 105
+F+Y+L PE ++ L +FGPFG V + KV D N+ K FG + M + + +
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFG-FVTMTNYDEAAMAIAS 344
Query: 106 ANDY-LGQSFLKPSFNT 121
N Y LG+ L+ SF T
Sbjct: 345 LNGYRLGERVLQVSFKT 361
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 2 QNLVTLAAMTGAGTMSPTALSG-LASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADL 60
Q L + + G G P +G L +N A S NL + +LP + +
Sbjct: 4 QILGAMESQVGGGPAGPALPNGPLLGTNGATDDSK--------TNLIVNYLPQNMTQDEF 55
Query: 61 ASMFGPFGTVLSAKVFIDKQNNRSKCFG 88
S+FG G + S K+ DK +S +G
Sbjct: 56 KSLFGSIGDIESCKLVRDKITGQSLGYG 83
>sp|Q14576|ELAV3_HUMAN ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 46 LFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFFILTIRFDT 105
+F+Y+L PE ++ L +FGPFG V + KV D N+ K FG + M + + +
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFG-FVTMTNYDEAAMAIAS 344
Query: 106 ANDY-LGQSFLKPSFNT 121
N Y LG+ L+ SF T
Sbjct: 345 LNGYRLGERVLQVSFKT 361
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 2 QNLVTLAAMTGAGTMSPTALSG-LASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADL 60
Q L + + G G P +G L +N A S NL + +LP + +
Sbjct: 4 QILGAMESQVGGGPAGPALPNGPLLGTNGATDDSK--------TNLIVNYLPQNMTQDEF 55
Query: 61 ASMFGPFGTVLSAKVFIDKQNNRSKCFG 88
S+FG G + S K+ DK +S +G
Sbjct: 56 KSLFGSIGDIESCKLVRDKITGQSLGYG 83
>sp|P29558|RBMS1_HUMAN RNA-binding motif, single-stranded-interacting protein 1 OS=Homo
sapiens GN=RBMS1 PE=1 SV=3
Length = 406
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 45 NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
NL+I LPP +D DL + P+G ++S K +DK N+ K +G + F
Sbjct: 63 NLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDF 110
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 20 ALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFID- 78
A+S L +S + +Q P NL+I +LP + +L +M PFG V+S ++ D
Sbjct: 119 AVSALKASGVQAQMAKQQEQDP--TNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS 176
Query: 79 ----------KQNNRSKCFGTIIFMRKFFILT 100
+ + KC I FI T
Sbjct: 177 SGTSRGVGFARMESTEKCEAVIGHFNGKFIKT 208
>sp|A4QNI8|ELAV4_XENTR ELAV-like protein 4 OS=Xenopus tropicalis GN=elavl4 PE=2 SV=1
Length = 400
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 1 MQNLVTLAAMTGAGTMSPTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADL 60
+ NL+ +A G SP + G+ S VG + TG G +F+Y+L P+ ++ L
Sbjct: 280 LDNLLNMAY--GVKRFSPITIDGMTS---LVGMNIPGHTG-TGWCIFVYNLSPDSDESVL 333
Query: 61 ASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFFILTIRFDTANDY-LGQSFLKPSF 119
+FGPFG V + KV D N+ K FG + M + + + N Y LG L+ SF
Sbjct: 334 WQLFGPFGAVNNVKVIRDFNTNKCKGFG-FVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 392
Query: 120 NT 121
T
Sbjct: 393 KT 394
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Query: 15 TMSPTALSGLASSNAAVGSSGKQLTGPE----GA-------NLFIYHLPPEFSDADLASM 63
TM P +G +SN + G S P GA NL + +LP + + S+
Sbjct: 12 TMEPQVSNG-PTSNTSNGPSSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSL 70
Query: 64 FGPFGTVLSAKVFIDK 79
FG G + S K+ DK
Sbjct: 71 FGSIGEIESCKLVRDK 86
>sp|Q7SZT7|ELAV4_XENLA ELAV-like protein 4 OS=Xenopus laevis GN=elavl4 PE=2 SV=1
Length = 400
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 1 MQNLVTLAAMTGAGTMSPTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADL 60
+ NL+ +A G SP + G+ S VG + TG G +F+Y+L P+ ++ L
Sbjct: 280 LDNLLNMAY--GVKRFSPITIDGMTS---LVGMNIPGHTG-TGWCIFVYNLSPDSDESVL 333
Query: 61 ASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFFILTIRFDTANDY-LGQSFLKPSF 119
+FGPFG V + KV D N+ K FG + M + + + N Y LG L+ SF
Sbjct: 334 WQLFGPFGAVNNVKVIRDFNTNKCKGFG-FVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 392
Query: 120 NT 121
T
Sbjct: 393 KT 394
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Query: 15 TMSPTALSGLASSNAAVGSSGKQLTGPE----GA-------NLFIYHLPPEFSDADLASM 63
TM P +G +SN + G S P GA NL + +LP + + S+
Sbjct: 12 TMEPQVSNG-PTSNTSNGPSSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSL 70
Query: 64 FGPFGTVLSAKVFIDK 79
FG G + S K+ DK
Sbjct: 71 FGSIGEIESCKLVRDK 86
>sp|Q28GD4|ELAV2_XENTR ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2
Length = 375
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 43 GANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFMRKFFILTIR 102
G +F+Y+L P+ ++ L MFGPFG V + KV D N+ K FG + M + +
Sbjct: 291 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFG-FVTMTNYDEAAMA 349
Query: 103 FDTANDY-LGQSFLKPSFNT 121
+ N Y LG L+ SF T
Sbjct: 350 IASLNGYRLGDRVLQVSFKT 369
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 45 NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIFM 93
NL + +LP + +L S+FG G + S K+ DK +S +G + ++
Sbjct: 68 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYI 116
>sp|Q3ZBP3|RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1 OS=Bos
taurus GN=RBMS1 PE=2 SV=1
Length = 403
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 45 NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
NL+I LPP +D DL + P+G ++S K +DK N+ K +G + F
Sbjct: 63 NLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDF 110
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 20 ALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFID- 78
A+S L +S + +Q P NL+I +LP + +L +M PFG V+S ++ D
Sbjct: 119 AVSALKASGVQAQMAKQQEQDP--TNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS 176
Query: 79 ----------KQNNRSKCFGTIIFMRKFFILT 100
+ + KC I FI T
Sbjct: 177 SGTSRGVGFARMESTEKCEAVIGHFNGKFIKT 208
>sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 17 SPTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVF 76
SP + G+ S A + G TG +F+Y+L P+ ++ L MFGPFG V + KV
Sbjct: 254 SPMTIDGMTSL-AGINIPGHPGTG---WCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 309
Query: 77 IDKQNNRSKCFGTIIFMRKFFILTIRFDTANDY-LGQSFLKPSFNT 121
D N+ K FG + M + + + N Y LG L+ SF T
Sbjct: 310 RDFNTNKCKGFG-FVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKT 354
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 18 PTALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFI 77
PT ++ SS G++ T NL + +LP + +L S+FG G + S K+
Sbjct: 18 PTTVNNNCSSPVDSGNTEDSKT-----NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVR 72
Query: 78 DKQNNRSKCFGTIIFM 93
DK +S +G + ++
Sbjct: 73 DKITGQSLGYGFVNYI 88
>sp|Q5PQP1|RBMS1_RAT RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus
norvegicus GN=Rbms1 PE=2 SV=1
Length = 403
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 45 NLFIYHLPPEFSDADLASMFGPFGTVLSAKVFIDKQNNRSKCFGTIIF 92
NL+I LPP +D DL + P+G ++S K +DK N+ K +G + F
Sbjct: 63 NLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDF 110
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 20 ALSGLASSNAAVGSSGKQLTGPEGANLFIYHLPPEFSDADLASMFGPFGTVLSAKVFID- 78
A+S L +S + +Q P NL+I +LP + +L +M PFG V+S +V D
Sbjct: 119 AVSALKASGVQAQMAKQQEQDP--TNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDS 176
Query: 79 ----------KQNNRSKCFGTIIFMRKFFILT 100
+ + KC I FI T
Sbjct: 177 SGTSRGVGFARMESTEKCEAVIGHFNGKFIKT 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,463,902
Number of Sequences: 539616
Number of extensions: 1676840
Number of successful extensions: 4454
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 3793
Number of HSP's gapped (non-prelim): 714
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)