Query psy8617
Match_columns 184
No_of_seqs 216 out of 1217
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 23:24:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8617.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8617hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a4e_A Cadherin-11; dimer, cal 100.0 1.6E-37 5.6E-42 238.1 18.9 156 2-182 16-176 (215)
2 2qvi_A Cadherin-2; beta barrel 100.0 1.6E-36 5.3E-41 232.6 16.3 161 2-182 13-182 (215)
3 3mvs_A Cadherin-23, otocadheri 100.0 3.4E-36 1.2E-40 230.0 15.2 152 2-182 23-174 (210)
4 3lnd_A CDH6 protein, cadherin 100.0 7E-37 2.4E-41 233.3 10.6 154 4-182 17-175 (207)
5 3ppe_A Vascular endothelial ca 100.0 3.9E-35 1.3E-39 223.0 18.9 153 2-182 13-172 (203)
6 3qrb_A Cadherin-1; cell adhesi 100.0 1.5E-35 5E-40 226.9 16.1 158 3-182 16-183 (213)
7 2x2u_A Proto-oncogene tyrosine 100.0 2.9E-37 1E-41 241.1 4.5 157 2-182 16-205 (246)
8 3k5r_A Cadherin 13; mouse, str 100.0 2.8E-35 9.5E-40 226.1 14.6 158 2-182 14-184 (218)
9 2a62_A Cadherin-8; extracellul 100.0 2.1E-35 7.3E-40 238.8 13.3 156 2-182 119-286 (322)
10 3ubf_A Neural-cadherin; cell a 100.0 4E-33 1.4E-37 225.0 17.3 152 2-182 121-279 (316)
11 2a62_A Cadherin-8; extracellul 100.0 1.5E-33 5.1E-38 228.0 11.0 156 2-182 15-175 (322)
12 3ubf_A Neural-cadherin; cell a 100.0 9.9E-32 3.4E-36 216.8 16.9 161 5-182 3-173 (316)
13 1l3w_A EP-cadherin, C-cadherin 100.0 9.9E-32 3.4E-36 230.9 13.9 161 2-182 127-298 (546)
14 3ubh_A Neural-cadherin; cell a 100.0 6.3E-31 2.2E-35 219.5 17.5 151 2-182 232-387 (419)
15 3q2v_A Cadherin-1; cell adhesi 100.0 2.7E-31 9.2E-36 228.4 14.5 162 1-182 120-292 (550)
16 3ubh_A Neural-cadherin; cell a 100.0 1.3E-30 4.5E-35 217.5 17.8 161 5-182 8-178 (419)
17 3q2w_A Cadherin-2; cell adhesi 100.0 3.2E-31 1.1E-35 228.3 14.3 162 1-182 120-295 (559)
18 3q2w_A Cadherin-2; cell adhesi 100.0 6.6E-31 2.2E-35 226.4 16.0 159 5-182 15-182 (559)
19 1q55_A EP-cadherin, C-cadherin 100.0 1.1E-30 3.6E-35 234.7 13.8 162 1-182 275-447 (880)
20 1l3w_A EP-cadherin, C-cadherin 100.0 1.6E-30 5.4E-35 223.4 13.8 155 3-182 240-404 (546)
21 3q2v_A Cadherin-1; cell adhesi 100.0 6.9E-30 2.4E-34 219.7 17.1 155 3-182 234-398 (550)
22 4apx_B Protocadherin-15, otoca 100.0 1.3E-29 4.4E-34 197.2 11.4 157 2-182 30-204 (242)
23 1q55_A EP-cadherin, C-cadherin 100.0 2.1E-29 7.3E-34 226.3 14.0 155 3-182 389-553 (880)
24 2yst_A Protocadherin-7; BH-PCD 99.9 8.6E-25 2.9E-29 152.6 7.8 93 2-115 27-119 (119)
25 2yqg_A Desmoglein-2, HDGC; cad 99.9 2.9E-25 9.8E-30 155.9 4.4 99 2-120 25-123 (123)
26 1ncg_A N-cadherin; cell adhesi 99.9 3.4E-23 1.2E-27 142.5 8.5 94 2-117 15-110 (110)
27 2x2u_A Proto-oncogene tyrosine 99.9 5.4E-23 1.9E-27 160.3 7.1 93 2-118 152-245 (246)
28 2ee0_A Protocadherin-9; Ca dom 99.9 1.1E-21 3.8E-26 135.7 7.1 88 2-111 27-114 (114)
29 2a4e_A Cadherin-11; dimer, cal 99.8 3.5E-21 1.2E-25 147.2 10.5 90 2-116 120-215 (215)
30 1wyj_A Protocadherin beta 14; 99.8 7.9E-23 2.7E-27 143.7 0.9 96 2-125 21-123 (125)
31 1zvn_A Mn-cadherin; strand dim 99.8 8.6E-21 3E-25 128.0 10.7 82 3-109 17-99 (99)
32 1zxk_A Cadherin-8; strand dime 99.8 8.6E-21 2.9E-25 127.8 10.6 82 3-109 16-98 (98)
33 3mvs_A Cadherin-23, otocadheri 99.8 4.7E-20 1.6E-24 140.4 11.4 88 2-114 122-210 (210)
34 2ee0_A Protocadherin-9; Ca dom 99.8 3.4E-21 1.2E-25 133.3 3.9 78 105-182 2-84 (114)
35 2yst_A Protocadherin-7; BH-PCD 99.8 1.1E-20 3.9E-25 131.6 4.1 78 105-182 2-83 (119)
36 3k6d_A T-cadherin; cell adhesi 99.8 2E-19 7E-24 121.3 8.8 85 2-109 13-99 (99)
37 2omz_B Epithelial-cadherin; le 99.8 3.6E-19 1.2E-23 121.3 9.9 85 4-110 21-105 (105)
38 3k6f_A T-cadherin; cell adhesi 99.8 4.9E-19 1.7E-23 119.6 10.0 82 5-109 19-100 (100)
39 3k6i_A T-cadherin; cell adhesi 99.8 1E-18 3.5E-23 117.9 11.1 85 2-109 13-99 (99)
40 3qrb_A Cadherin-1; cell adhesi 99.7 1.2E-17 4E-22 127.4 9.0 89 2-109 121-213 (213)
41 3ppe_A Vascular endothelial ca 99.7 4.7E-17 1.6E-21 123.2 11.5 82 2-109 117-203 (203)
42 3lnd_A CDH6 protein, cadherin 99.7 2.9E-17 1E-21 124.6 9.2 83 2-109 119-207 (207)
43 2qvi_A Cadherin-2; beta barrel 99.7 1.8E-17 6.3E-22 126.5 7.3 89 2-109 121-215 (215)
44 3k5r_A Cadherin 13; mouse, str 99.7 6.2E-17 2.1E-21 123.7 8.7 89 2-109 121-218 (218)
45 4apx_B Protocadherin-15, otoca 99.7 1.8E-16 6E-21 123.1 7.6 89 2-109 140-237 (242)
46 1wuz_A Pcdha4 protein, CNR-EC1 99.6 8.5E-17 2.9E-21 109.1 0.8 83 2-113 13-103 (103)
47 2yqg_A Desmoglein-2, HDGC; cad 99.3 2.6E-13 8.9E-18 94.7 1.0 72 110-182 5-82 (123)
48 1zvn_A Mn-cadherin; strand dim 99.3 4.8E-12 1.6E-16 84.9 5.6 59 122-182 6-68 (99)
49 1zxk_A Cadherin-8; strand dime 99.3 5.1E-12 1.8E-16 84.6 5.3 59 122-182 5-67 (98)
50 3k6d_A T-cadherin; cell adhesi 99.1 5.9E-11 2E-15 79.5 4.2 57 122-182 5-69 (99)
51 3k6f_A T-cadherin; cell adhesi 99.1 2.1E-10 7.2E-15 77.0 5.3 56 123-182 7-70 (100)
52 3k6i_A T-cadherin; cell adhesi 99.0 3E-10 1E-14 76.0 6.0 56 123-182 6-69 (99)
53 1wyj_A Protocadherin beta 14; 99.0 9.1E-11 3.1E-15 81.9 1.7 63 119-183 10-77 (125)
54 1ncg_A N-cadherin; cell adhesi 99.0 3.6E-10 1.2E-14 77.1 4.4 59 121-182 6-72 (110)
55 2omz_B Epithelial-cadherin; le 98.9 5E-10 1.7E-14 75.8 3.5 57 123-182 10-74 (105)
56 1wuz_A Pcdha4 protein, CNR-EC1 98.9 5E-11 1.7E-15 80.5 -2.2 62 120-182 3-68 (103)
57 2yhg_A SDE_182CT, cellulose-bi 89.8 1.8 6.2E-05 35.8 8.7 48 59-107 388-436 (437)
58 1op4_A Neural-cadherin; beta s 87.4 0.64 2.2E-05 33.1 4.0 62 112-178 31-93 (159)
59 1op4_A Neural-cadherin; beta s 78.0 16 0.00054 25.8 8.1 34 59-94 78-111 (159)
60 2yrl_A KIAA1837 protein; PKD d 75.9 6.3 0.00021 25.5 5.2 32 79-112 67-98 (102)
61 2kpn_A Bacillolysin; solution 70.0 12 0.00043 24.3 5.5 52 61-114 35-90 (103)
62 2jtd_A Myomesin-1, skelemin; i 59.7 38 0.0013 23.0 7.7 65 21-93 52-119 (142)
63 2y72_A Collagenase, collagenas 56.3 26 0.00088 21.4 5.0 30 77-108 55-84 (85)
64 3ott_A Two-component system se 48.0 1E+02 0.0036 26.5 9.2 66 42-119 688-753 (758)
65 3pe9_A Fibronectin(III)-like m 46.4 55 0.0019 20.8 9.8 29 80-109 60-88 (98)
66 3rb5_A Na/Ca exchange protein; 36.2 1.5E+02 0.005 22.9 13.5 77 77-159 87-164 (298)
67 1u2c_A Dystroglycan; IG-like d 34.7 1.5E+02 0.005 22.4 8.7 56 55-112 44-104 (246)
68 1row_A SSP-19, MSP-domain prot 32.3 59 0.002 21.1 3.9 25 43-70 29-53 (109)
69 3kvp_A Uncharacterized protein 30.4 57 0.0019 19.5 3.2 18 161-178 41-58 (72)
70 1m1s_A WR4; structural genomic 28.8 76 0.0026 20.9 4.0 26 43-71 37-62 (116)
71 1e09_A PRU AV 1; allergen, maj 24.3 1.1E+02 0.0039 20.8 4.6 24 6-32 66-89 (159)
72 3oji_A Abscisic acid receptor 23.2 1.5E+02 0.005 21.4 5.0 27 3-32 92-118 (189)
73 3ie5_A Phenolic oxidative coup 22.8 2E+02 0.0067 20.0 8.4 17 99-115 118-134 (165)
74 1msp_A MSP, major sperm protei 22.5 97 0.0033 20.5 3.7 25 43-70 39-63 (126)
75 3jrs_A PYL1, putative uncharac 22.3 1.5E+02 0.0052 21.6 5.0 27 3-32 112-138 (208)
76 4a2l_A BT_4663, two-component 21.8 3.8E+02 0.013 23.0 11.5 35 80-119 753-787 (795)
No 1
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=1.6e-37 Score=238.05 Aligned_cols=156 Identities=26% Similarity=0.337 Sum_probs=145.1
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
.|.|+.|+++ |+|+|.| |+.++|+|.++.. ..+|.|++.+|.|++++.||||...
T Consensus 16 ~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~-----------------------~~~F~Id~~tG~i~~~~~LDrE~~~ 70 (215)
T 2a4e_A 16 GPDPVLVGRL-HSDIDSG-DGNIKYILSGEGA-----------------------GTIFVIDDKSGNIHATKTLDREERA 70 (215)
T ss_dssp SSSCEEEEEC-CCTTCCS-SSCEEEEEEETTB-----------------------TTTEEECTTTCEEEECSCCCTTTCS
T ss_pred CCCCEEEEEE-EECCCCC-CCeEEEEEECCCC-----------------------CCeEEEECCceEEEECCccCCccCC
Confidence 4789999998 8999998 7899999987654 4699999999999999999999999
Q ss_pred EEEEEEEEEeCCC-CcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEe
Q psy8617 82 KFLLKIAACDNGT-PVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDL---ASNAALRYSLI 157 (184)
Q Consensus 82 ~~~l~v~a~d~~~-p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~i~y~i~ 157 (184)
.|.|.|.|+|.+. +++++.+.|.|.|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|. |.|+.++|+|.
T Consensus 71 ~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~ 150 (215)
T 2a4e_A 71 QYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSIL 150 (215)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEE
T ss_pred EEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEe
Confidence 9999999999875 6688899999999999999999999999999999999999999999999997 78999999999
Q ss_pred cCCCcEEEEcCccEEEEc-ccccccc
Q psy8617 158 PSNTSFQINPFSGKKSIL-YLHSVIH 182 (184)
Q Consensus 158 ~~~~~F~Id~~tG~i~~~-~~~~~~~ 182 (184)
+++..|.|++.||+|+++ +.+++|.
T Consensus 151 ~~~~~F~Id~~tG~I~~~~~~LD~E~ 176 (215)
T 2a4e_A 151 EGQPYFSVEAQTGIIRTALPNMDREA 176 (215)
T ss_dssp ESTTTEEECTTTCEEEECSSCCCSSS
T ss_pred CCCCcEEEeCCccEEEEcccCCCccc
Confidence 998999999999999999 8888775
No 2
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=1.6e-36 Score=232.65 Aligned_cols=161 Identities=28% Similarity=0.328 Sum_probs=146.0
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
+| |+.+++|.|.|.|.+.|+.++|+|.++... ....++|.|++.+|.|++++.||||...
T Consensus 13 ~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 72 (215)
T 2qvi_A 13 SR-GPFPQELVRIRSDRDKNLSLRYSVTGPGAD-------------------QPPTGIFIINPISGQLSVTKPLDRELIA 72 (215)
T ss_dssp CC-CCSSEEEEECCCGGGGTSCEEEEEESTTSS-------------------STTCSSEEECTTTCEEEECSCCCTTTCS
T ss_pred CC-CCCCEEEEEEeCCCCCCceEEEEEECCCCC-------------------CCCCCcEEEeCCccEEEECcccCcccCC
Confidence 45 788889999999998999999999876431 0124799999999999999999999999
Q ss_pred EEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC--CCCceEEEEEecC
Q psy8617 82 KFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDL--ASNAALRYSLIPS 159 (184)
Q Consensus 82 ~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--~~n~~i~y~i~~~ 159 (184)
.|.|.|.|+|.+.|++++++.|.|.|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|. +.|+.++|+|.++
T Consensus 73 ~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~ 152 (215)
T 2qvi_A 73 RFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQ 152 (215)
T ss_dssp EEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEEC
T ss_pred eEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 7899999999976
Q ss_pred C------CcEEEEcCccEEEEc-ccccccc
Q psy8617 160 N------TSFQINPFSGKKSIL-YLHSVIH 182 (184)
Q Consensus 160 ~------~~F~Id~~tG~i~~~-~~~~~~~ 182 (184)
+ ..|.|++.||.|++. +.++.|.
T Consensus 153 ~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~ 182 (215)
T 2qvi_A 153 APSTPSPNMFTINNETGDIITVAAGLDREK 182 (215)
T ss_dssp SSCCSSTTCEEECTTTCEEEECSCCCCTTT
T ss_pred CCCCCcCCeEEEcCCCcEEEEecCCCCccc
Confidence 3 789999999999996 7888774
No 3
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=3.4e-36 Score=229.99 Aligned_cols=152 Identities=31% Similarity=0.480 Sum_probs=141.5
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
+|+|+.|+++.|+|+|. +.++|+|.++.. .++|.|++.+|.|++++.||||...
T Consensus 23 ~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~-----------------------~~~F~Id~~tG~i~~~~~LD~E~~~ 76 (210)
T 3mvs_A 23 TPVGSSVTQLLARDMDN---DPLVFGVSGEEA-----------------------SRFFAVEPDTGVVWLRQPLDRETKS 76 (210)
T ss_dssp CCTTCEEEECCEECTTC---CCCEEEEESHHH-----------------------HHHEEECTTTCEEEESSCCCTTTCC
T ss_pred CCCCCEEEEEEEEeCCC---CcEEEEEeCCCC-----------------------CCcEEEeCCCCEEEECCccCCcccc
Confidence 68999999999999994 568999976654 5799999999999999999999999
Q ss_pred EEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCC
Q psy8617 82 KFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALRYSLIPSNT 161 (184)
Q Consensus 82 ~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~i~~~~~ 161 (184)
.|.|.|.|+|.++ ..++.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..++.
T Consensus 77 ~y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~~ 153 (210)
T 3mvs_A 77 EFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSP 153 (210)
T ss_dssp EEEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCCS
T ss_pred eEEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCCC
Confidence 9999999999876 3567899999999999999999999999999999999999999999999999999999998889
Q ss_pred cEEEEcCccEEEEcccccccc
Q psy8617 162 SFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 162 ~F~Id~~tG~i~~~~~~~~~~ 182 (184)
+|.|++.+|.|++++.++.|.
T Consensus 154 ~F~Id~~tG~i~~~~~LD~E~ 174 (210)
T 3mvs_A 154 FFAIDSARGIVTVIQELDYEV 174 (210)
T ss_dssp SEEECTTTCEEEECSCCCTTT
T ss_pred CEEEeCCcEEEEECCcCCCcc
Confidence 999999999999999999874
No 4
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=7e-37 Score=233.31 Aligned_cols=154 Identities=26% Similarity=0.350 Sum_probs=137.3
Q ss_pred CCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccccEE
Q psy8617 4 CLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRDKF 83 (184)
Q Consensus 4 ~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~~~ 83 (184)
.++.|+++ |+|+|.| ++.++|+|.++.. .++|.|++.+|.|+++++||||....|
T Consensus 17 ~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~-----------------------~~~F~Id~~tG~i~~~~~LDrE~~~~y 71 (207)
T 3lnd_A 17 DYQYVGKL-HSDQDRG-DGSLKYILSGDGA-----------------------GDLFIINENTGDIQATKRLDREEKPVY 71 (207)
T ss_dssp SCEEEEEC-CCTTCCS-STTBCCCCCSSSB-----------------------TTTEEECTTTCEEEECSCCCGGGCCEE
T ss_pred CCEEEEEE-EeCCCCC-CceEEEEEECCCC-----------------------CCeEEEECCceEEEECCCcCcccCCEE
Confidence 35788988 8999998 6789999987654 469999999999999999999999999
Q ss_pred EEEEEEEeCC-CCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEecC
Q psy8617 84 LLKIAACDNG-TPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDL---ASNAALRYSLIPS 159 (184)
Q Consensus 84 ~l~v~a~d~~-~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~i~y~i~~~ 159 (184)
.|.|.|+|.+ .+++++++.+.|.|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|. |.|+.++|+|..+
T Consensus 72 ~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~ 151 (207)
T 3lnd_A 72 ILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQG 151 (207)
T ss_dssp EC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEES
T ss_pred EEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCC
Confidence 9999999987 46788889999999999999999999999999999999999999999999998 7899999999999
Q ss_pred CCcEEEEcCccEEEEc-ccccccc
Q psy8617 160 NTSFQINPFSGKKSIL-YLHSVIH 182 (184)
Q Consensus 160 ~~~F~Id~~tG~i~~~-~~~~~~~ 182 (184)
+..|.|++.||+|+++ +.++.|.
T Consensus 152 ~~~F~Id~~tG~i~~~~~~lD~E~ 175 (207)
T 3lnd_A 152 QPYFSVESETGIIKTALLNMDREN 175 (207)
T ss_dssp GGGEEECTTTCEEEECCSSCCC--
T ss_pred CCCEEEcCCCcEEEECcccCCccc
Confidence 8999999999999999 8888774
No 5
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=3.9e-35 Score=223.04 Aligned_cols=153 Identities=23% Similarity=0.279 Sum_probs=141.5
Q ss_pred cCCC--eEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccc
Q psy8617 2 VPCL--FQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRET 79 (184)
Q Consensus 2 ~p~G--t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~ 79 (184)
+|.| +.|+++. +|+|.|.+ +|+|.++.. .++|.|++.+|.|++++.||||.
T Consensus 13 ~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~-----------------------~~~F~Id~~tG~i~~~~~LDrE~ 65 (203)
T 3ppe_A 13 IDSPLPHHVGKLT-SSVGNKNA---MYIIEGESA-----------------------NTIFKVQGYDGDIYAFERLDREK 65 (203)
T ss_dssp CCSSSCEEEEECC-BCCCCTTE---EEEEEETTB-----------------------TTTEEEETTTTEEEESSCCCTTT
T ss_pred CCCCCCEEEEEEE-ecCCCCCc---EEEEecCCC-----------------------CCeEEEECCcCEEEECccccccc
Confidence 3555 8899999 99998776 999997765 56999999999999999999999
Q ss_pred ccEEEEEEEEEeCCCC-cccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCC---CCCCceEEEE
Q psy8617 80 RDKFLLKIAACDNGTP-VSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDED---LASNAALRYS 155 (184)
Q Consensus 80 ~~~~~l~v~a~d~~~p-~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D---~~~n~~i~y~ 155 (184)
...|.|.|.|+|.+.| ++++.+.++|.|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+| .|.|+.++|+
T Consensus 66 ~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~ 145 (203)
T 3ppe_A 66 KAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQ 145 (203)
T ss_dssp CCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEE
T ss_pred cceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEE
Confidence 9999999999999986 58888999999999999999999999999999999999999999999999 4789999999
Q ss_pred EecCCCcEEEEcCccEEEEc-ccccccc
Q psy8617 156 LIPSNTSFQINPFSGKKSIL-YLHSVIH 182 (184)
Q Consensus 156 i~~~~~~F~Id~~tG~i~~~-~~~~~~~ 182 (184)
|.+++.+|.|+ .||.|+++ +.++.|.
T Consensus 146 i~~~~~~F~I~-~tG~i~~~~~~LD~E~ 172 (203)
T 3ppe_A 146 IIKGNEYFTVD-DSGVIFTARADLDRES 172 (203)
T ss_dssp EEESTTTEEEC-TTSEEEESCSCCCTTT
T ss_pred EeCCCCcEEEe-CCeEEEECCcCCCccc
Confidence 99999999999 99999999 8998774
No 6
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=1.5e-35 Score=226.88 Aligned_cols=158 Identities=29% Similarity=0.422 Sum_probs=142.5
Q ss_pred CCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccccE
Q psy8617 3 PCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRDK 82 (184)
Q Consensus 3 p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~~ 82 (184)
+.|+.|+++.| |.|. |+.++|+|.+...+ ..+.++|.|++.+|.|++.++||||....
T Consensus 16 ~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~LDrE~~~~ 73 (213)
T 3qrb_A 16 EFPKNLVQIKS-NRDK--ETKVFYSITGQGAD-------------------KPPVGVFIIERETGWLKVTQPLDREAIAK 73 (213)
T ss_dssp SSSEEEEECCC-GGGG--TSCEEEEEESBTTT-------------------BSSTTSEEECTTTCEEEECSCCCTTTCSE
T ss_pred CCCcEEEEEEE-CCCC--CceEEEEEEcCCCC-------------------CCCCCeEEEECCCCEEEECCccCcccCce
Confidence 36889999999 7775 88999999885431 11256999999999999999999999999
Q ss_pred EEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEecC
Q psy8617 83 FLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLA---SNAALRYSLIPS 159 (184)
Q Consensus 83 ~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~---~n~~i~y~i~~~ 159 (184)
|.|.|.|+|.++|++++++.|+|.|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|.+ .|+.++|+|.++
T Consensus 74 y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~ 153 (213)
T 3qrb_A 74 YILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQ 153 (213)
T ss_dssp EEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEE
T ss_pred EEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 899999999864
Q ss_pred ------CCcEEEEcCccEEEEc-ccccccc
Q psy8617 160 ------NTSFQINPFSGKKSIL-YLHSVIH 182 (184)
Q Consensus 160 ------~~~F~Id~~tG~i~~~-~~~~~~~ 182 (184)
...|.|++.||.|+++ +.++.|.
T Consensus 154 ~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~ 183 (213)
T 3qrb_A 154 DPELPHKNMFTVNRDTGVISVLTSGLDRES 183 (213)
T ss_dssp ESCCSCSCSEEECTTTCEEEECSSCCCTTT
T ss_pred CCCCCcCCeEEEECCCcEEEEccCCCCCcc
Confidence 2689999999999997 7888774
No 7
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=241.12 Aligned_cols=157 Identities=20% Similarity=0.206 Sum_probs=137.8
Q ss_pred cCCCeEEEEEEEEeCCCCC--CcEEE------EEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECC
Q psy8617 2 VPCLFQILQVTAVDLDTGN--NARIT------YKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQ 73 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~--n~~i~------Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~ 73 (184)
+|+|+.|++|+|+|+|.|. +.+|. |+|..+. .++|.|++.+|+|++++
T Consensus 16 ~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~------------------------~~~F~Id~~tG~i~~~~ 71 (246)
T 2x2u_A 16 QAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHE------------------------NNWIRIQEDTGLLYLQR 71 (246)
T ss_dssp BCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEE------------------------CCSEEECTTTCEEEESS
T ss_pred CCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCC------------------------CCEEEECCCcEEEEECC
Confidence 6899999999999999854 34443 4443331 46999999999999999
Q ss_pred CCCcccccEE------------EEEEEEEeCCCC--cccceEEEEEEEecCCCCCCc----------cCCCceEEEEeCC
Q psy8617 74 PMDRETRDKF------------LLKIAACDNGTP--VSTAYATVAINVLDANDNDPK----------FSKQDYEFSIEEN 129 (184)
Q Consensus 74 ~lD~E~~~~~------------~l~v~a~d~~~p--~~~~~~~v~I~v~d~Nd~~P~----------f~~~~~~~~v~E~ 129 (184)
+||||....| .|.|.|+|.+.| .+++++.|.|.|.|+|||+|. |.+..|.+.|+|+
T Consensus 72 ~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En 151 (246)
T 2x2u_A 72 SLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIREN 151 (246)
T ss_dssp CBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBT
T ss_pred cCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECC
Confidence 9999999999 999999999987 678889999999999999999 9999999999999
Q ss_pred CCCCcEEEEEEEEeCCCCCCceEEEEEecC-CCcEEEEcCccEEEEcccccccc
Q psy8617 130 LPRGTVVGSVKATDEDLASNAALRYSLIPS-NTSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 130 ~~~gt~v~~v~a~D~D~~~n~~i~y~i~~~-~~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
.++|+.|++|.|+|+|.|.|+.++|+|.++ ..+|.|++.||+|++.+.+++|.
T Consensus 152 ~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~ 205 (246)
T 2x2u_A 152 RPPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQ 205 (246)
T ss_dssp SCCCEEEECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTT
T ss_pred CCCCcEEEEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccc
Confidence 999999999999999999999999999988 49999999999999999999875
No 8
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=2.8e-35 Score=226.08 Aligned_cols=158 Identities=27% Similarity=0.323 Sum_probs=141.9
Q ss_pred cCCC--eEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccc
Q psy8617 2 VPCL--FQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRET 79 (184)
Q Consensus 2 ~p~G--t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~ 79 (184)
+|+| +.|+++.|+|+|. .++|+|.+.... ..+.++|.|++.+|.|++++.||||.
T Consensus 14 ~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~LDrE~ 70 (218)
T 3k5r_A 14 QRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVD-------------------QDPKGTFRINENTGSVSVTRTLDRET 70 (218)
T ss_dssp CCSSCCEEEEECBCTTCCT----TCEEEEEEBTTT-------------------BSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred CCCCCCEEEEEEEecCCCc----eEEEEEEcCCCC-------------------CCCCCeEEEeCCceEEEECCcCCccc
Confidence 4666 8899999998885 789999765321 11257999999999999999999999
Q ss_pred ccEEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC--CCCceEEEEEe
Q psy8617 80 RDKFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDL--ASNAALRYSLI 157 (184)
Q Consensus 80 ~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--~~n~~i~y~i~ 157 (184)
...|.|.|.|+|.+.|++++++.|.|.|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|. +.|+.++|+|.
T Consensus 71 ~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~ 150 (218)
T 3k5r_A 71 IATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIR 150 (218)
T ss_dssp CSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEE
T ss_pred CCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 68999999998
Q ss_pred cCC------CcEEEEcCccEEEEc---ccccccc
Q psy8617 158 PSN------TSFQINPFSGKKSIL---YLHSVIH 182 (184)
Q Consensus 158 ~~~------~~F~Id~~tG~i~~~---~~~~~~~ 182 (184)
+++ .+|.|++.||+|++. +.++.|.
T Consensus 151 ~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~ 184 (218)
T 3k5r_A 151 QQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRET 184 (218)
T ss_dssp EEESCCSCSCSEEECTTTCEEEECSCGGGCCGGG
T ss_pred cCCCCCCcCCEEEEECCccEEEEeccCCCCCccc
Confidence 764 579999999999987 6888876
No 9
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=2.1e-35 Score=238.78 Aligned_cols=156 Identities=31% Similarity=0.503 Sum_probs=143.2
Q ss_pred cCCCeEEEEEEEEeCCC---CCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC-CCCCc
Q psy8617 2 VPCLFQILQVTAVDLDT---GNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK-QPMDR 77 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~---g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~-~~lD~ 77 (184)
+|+|+.|++|.|+|+|. |.|+.++|+|.++.. +|.|++.+|.|+++ +.|||
T Consensus 119 ~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~-------------------------~F~Id~~tG~i~~~~~~LD~ 173 (322)
T 2a62_A 119 SILGTSVTNVTATDADDPVYGNSAKLVYSILEGQP-------------------------YFSIEPETAIIKTALPNMDR 173 (322)
T ss_dssp CCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECTT-------------------------TEEECTTTCCEEECSSCCCG
T ss_pred CCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCCC-------------------------CEEEecCCCEEEecccCCCc
Confidence 68899999999999995 788999999987654 89999999999998 89999
Q ss_pred ccccEEEEEEEEEeCCCCc--ccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE
Q psy8617 78 ETRDKFLLKIAACDNGTPV--STAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALRYS 155 (184)
Q Consensus 78 E~~~~~~l~v~a~d~~~p~--~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~ 155 (184)
|....|.|.|.|+|.+.|+ +++++.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+
T Consensus 174 E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~ 253 (322)
T 2a62_A 174 EAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYD 253 (322)
T ss_dssp GGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEE
T ss_pred ccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEE
Confidence 9999999999999999875 88999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCC--CcEEEE----cCccEEEEcccccccc
Q psy8617 156 LIPSN--TSFQIN----PFSGKKSILYLHSVIH 182 (184)
Q Consensus 156 i~~~~--~~F~Id----~~tG~i~~~~~~~~~~ 182 (184)
|..++ ++|.|+ +.+|.|++++.++.|.
T Consensus 254 i~~g~~~~~F~I~~d~~~~tG~i~~~~~LD~E~ 286 (322)
T 2a62_A 254 IIDGDGTALFEITSDAQAQDGVIRLRKPLDFET 286 (322)
T ss_dssp EC---CCSSBCCBCCTTTSEEEEEBCSCCCCSS
T ss_pred EECCCCCCcEEEeccCCCceEEEEECCcCCccc
Confidence 98764 899999 4699999999999875
No 10
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=4e-33 Score=224.97 Aligned_cols=152 Identities=22% Similarity=0.300 Sum_probs=138.5
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
+|+|+.|++++|+|+|.|.| ++|+|..+.. .++|.|++.+|.|+++++||||...
T Consensus 121 ~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~-----------------------~~~F~Id~~tG~i~~~~~lD~e~~~ 175 (316)
T 3ubf_A 121 APPNTPVFTLQARDPDTDHN--IHYFIVRDRT-----------------------GGRFEVDERSGVVRTRGTDLFQLDM 175 (316)
T ss_dssp CCTTCEEEECCEECSSTTCC--EEEEEEEEES-----------------------SSCEEECTTTCEEEECSSCCCCTTC
T ss_pred CCCCCEEEEEEEECCCCCCc--eEEEEEeCCC-----------------------CCEEEEECCccEEEECCcCCcccCc
Confidence 68999999999999999877 9999987654 5799999999999999999999999
Q ss_pred EEEEEEEEEeCCC----CcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEe
Q psy8617 82 KFLLKIAACDNGT----PVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALRYSLI 157 (184)
Q Consensus 82 ~~~l~v~a~d~~~----p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~i~ 157 (184)
.|.|.|.|+|.++ |.+++++.++|.|.| |||+|.|.+..|.+.|+|+.++|+.|++|.|.|+| |+.++|+|.
T Consensus 176 ~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~ 251 (316)
T 3ubf_A 176 EYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLK 251 (316)
T ss_dssp EEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEE
T ss_pred EEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEE
Confidence 9999999999985 457888899999999 99999999999999999999999999999999998 689999997
Q ss_pred -cC--CCcEEEEcCccEEEEcccccccc
Q psy8617 158 -PS--NTSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 158 -~~--~~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
.+ ..+|.|++.||+|++.+.++.|.
T Consensus 252 ~~~~~~~~F~Id~~tG~i~~~~~LD~E~ 279 (316)
T 3ubf_A 252 AQGQGAGTFNIGPTSGIVKLAKELDFED 279 (316)
T ss_dssp EESSCTTTEEECTTTCEEEECSCCCSSC
T ss_pred cCCCCCCeEEEECCeEEEEECCcCCccc
Confidence 33 38999999999999999999885
No 11
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1.5e-33 Score=227.98 Aligned_cols=156 Identities=29% Similarity=0.339 Sum_probs=143.5
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
.|.|+.|+++. +|+|.| ++.++|+|.++.. .++|.|++.+|.|++.+.||||...
T Consensus 15 ~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~~-----------------------~~~F~Id~~tG~i~~~~~LDrE~~~ 69 (322)
T 2a62_A 15 GPEPILVGRLH-TDLDPG-SKKIKYILSGDGA-----------------------GTIFQINDITGDIHAIKRLDREEKA 69 (322)
T ss_dssp CSSCEECCCCC-CCCCCS-SCCCEEEEEETTB-----------------------TTTEEEETTTTEEEECSCCCTTTCS
T ss_pred CCCCEEEEEEE-EcCCCC-CCEEEEEEECCCC-----------------------CCcEEEeCCcCEEEEeccCCccccc
Confidence 57899999996 999988 7889999987654 4699999999999999999999999
Q ss_pred EEEEEEEEEeCCC-CcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEe
Q psy8617 82 KFLLKIAACDNGT-PVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDL---ASNAALRYSLI 157 (184)
Q Consensus 82 ~~~l~v~a~d~~~-p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~i~y~i~ 157 (184)
.|.|.|.|+|.+. +++++.+.+.|.|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|. |.|+.++|+|.
T Consensus 70 ~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~ 149 (322)
T 2a62_A 70 EYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSIL 149 (322)
T ss_dssp BCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEE
T ss_pred EEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEc
Confidence 9999999999875 4577888999999999999999999999999999999999999999999996 78899999999
Q ss_pred cCCCcEEEEcCccEEEEc-ccccccc
Q psy8617 158 PSNTSFQINPFSGKKSIL-YLHSVIH 182 (184)
Q Consensus 158 ~~~~~F~Id~~tG~i~~~-~~~~~~~ 182 (184)
+++.+|.|++.||.|+++ +.+++|.
T Consensus 150 ~~~~~F~Id~~tG~i~~~~~~LD~E~ 175 (322)
T 2a62_A 150 EGQPYFSIEPETAIIKTALPNMDREA 175 (322)
T ss_dssp ECTTTEEECTTTCCEEECSSCCCGGG
T ss_pred cCCCCEEEecCCCEEEecccCCCccc
Confidence 999999999999999998 8888874
No 12
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.98 E-value=9.9e-32 Score=216.78 Aligned_cols=161 Identities=20% Similarity=0.263 Sum_probs=139.2
Q ss_pred CeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccc-----
Q psy8617 5 LFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRET----- 79 (184)
Q Consensus 5 Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~----- 79 (184)
..++.+++|+|+|.|+|+.+.|+|..+.. ...|+|..++ .+|.|++ +|.|+++++||||.
T Consensus 3 ~~p~~~~~atd~D~g~ng~v~y~l~~~~~----------~~~f~i~~~~----~~F~i~~-tG~l~~~~~LD~E~~~~~~ 67 (316)
T 3ubf_A 3 VRPTKRIEFTEADGDTEGKSVFQLEKETD----------KETFKIRDDN----PWVTVET-NGAVRVKKKWDYEELGPEK 67 (316)
T ss_dssp EEEEEEEEEESGGGCSTTCEEEECCCSST----------TCEEEESSCC----SSEEECT-TSEEEESSCCCGGGSCTTC
T ss_pred cCceEEEEEEecCCCCCceEEEEEEcCCC----------cceEEEeCCC----CeEEECC-CeEEEECCccChhhccccc
Confidence 46799999999999999999999976543 6789998654 4899999 99999999999998
Q ss_pred ccEEEEEEEEEeCCCC-cccceEEEEEEEecCCCCCCccCCCc--eEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEE
Q psy8617 80 RDKFLLKIAACDNGTP-VSTAYATVAINVLDANDNDPKFSKQD--YEFSIEENLPRGTVVGSVKATDEDLASNAALRYSL 156 (184)
Q Consensus 80 ~~~~~l~v~a~d~~~p-~~~~~~~v~I~v~d~Nd~~P~f~~~~--~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~i 156 (184)
...|.|.|.|.|++.| .+++++.|+|.|.|+|||+|.|.+.. |.+.|+|++++|+.|+++.|+|+|.+.| ++|+|
T Consensus 68 ~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i 145 (316)
T 3ubf_A 68 TIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFI 145 (316)
T ss_dssp EEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEE
T ss_pred ceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEE
Confidence 4578899999998876 57889999999999999999999886 8999999999999999999999999876 99999
Q ss_pred ecC--CCcEEEEcCccEEEEcccccccc
Q psy8617 157 IPS--NTSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 157 ~~~--~~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
..+ ..+|.|++.||+|++++.++.|.
T Consensus 146 ~~~~~~~~F~Id~~tG~i~~~~~lD~e~ 173 (316)
T 3ubf_A 146 VRDRTGGRFEVDERSGVVRTRGTDLFQL 173 (316)
T ss_dssp EEEESSSCEEECTTTCEEEECSSCCCCT
T ss_pred EeCCCCCEEEEECCccEEEECCcCCccc
Confidence 865 48999999999999999988774
No 13
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.97 E-value=9.9e-32 Score=230.94 Aligned_cols=161 Identities=26% Similarity=0.305 Sum_probs=145.4
Q ss_pred cCCCeEEEEEEEEeCCCC---CCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC-CCCCc
Q psy8617 2 VPCLFQILQVTAVDLDTG---NNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK-QPMDR 77 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g---~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~-~~lD~ 77 (184)
+|+|+.|+++.|+|+|.| .|+.++|+|.++.+. .+..++|.|++.+|.|++. +.|||
T Consensus 127 ~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~~LD~ 187 (546)
T 1l3w_A 127 VQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPE-------------------EPIPNLFTINRETGVISLIGTGLDR 187 (546)
T ss_dssp CCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSC-------------------CSCSCSEEECTTTCEEEECSCCCCT
T ss_pred CCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCC-------------------cccCCcEEEeCCCceEEEeccCCCc
Confidence 689999999999999998 689999999887630 0014699999999999996 78999
Q ss_pred ccccEEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCC--CCCCceEEEE
Q psy8617 78 ETRDKFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDED--LASNAALRYS 155 (184)
Q Consensus 78 E~~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D--~~~n~~i~y~ 155 (184)
|....|.|.|.|+|.++|++++++.|+|.|.|+|||+|.|.+..|.+.|+|+ ++|+.|+++.|+|+| .+.|+.++|+
T Consensus 188 E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~ 266 (546)
T 1l3w_A 188 EKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYK 266 (546)
T ss_dssp TTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECC
T ss_pred ccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEE
Confidence 9999999999999999888999999999999999999999999999999999 999999999999999 6789999999
Q ss_pred Eec-CCCcEEEE--c--CccEEEEcccccccc
Q psy8617 156 LIP-SNTSFQIN--P--FSGKKSILYLHSVIH 182 (184)
Q Consensus 156 i~~-~~~~F~Id--~--~tG~i~~~~~~~~~~ 182 (184)
|.+ ..+.|.|+ + .+|.|++.+.++.|.
T Consensus 267 i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~ 298 (546)
T 1l3w_A 267 IRVNEGGFFNITTDPESNQGILTTAKGLDFEL 298 (546)
T ss_dssp BSCCTTSCEEEEECTTTCCEEEEESSCCCCSS
T ss_pred EEeCCCceEEEEecCCCCeEEEEECccCCccc
Confidence 997 33899996 3 689999999999874
No 14
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.97 E-value=6.3e-31 Score=219.45 Aligned_cols=151 Identities=27% Similarity=0.390 Sum_probs=136.8
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEec-CCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQ-DDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETR 80 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~-~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~ 80 (184)
+|+|+.|++|.|+|+| |+.++|+|.. +.. .++|.|++.+|.|++.++||||..
T Consensus 232 ~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~~~-----------------------~~~F~I~~~tG~i~~~~~LD~E~~ 285 (419)
T 3ubh_A 232 QKKDSDIISIKAKSFA---DREIRYTLKAQGQG-----------------------AGTFNIGPTSGIVKLAKELDFEDL 285 (419)
T ss_dssp CCTTCEEEECCEECSS---CCCCEEEEEESSSC-----------------------CSSEEECTTTCEEEECSCCCTTCT
T ss_pred CCCCcEEEEEEEecCC---CCceEEEEecCCCC-----------------------CCcEEEECCCCEEEECcccCcccc
Confidence 6889999999999987 7789999974 333 579999999999999999999987
Q ss_pred c---EEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEE-EEeCCCCCCcEEEEEEEEeCCCCCCceEEEEE
Q psy8617 81 D---KFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEF-SIEENLPRGTVVGSVKATDEDLASNAALRYSL 156 (184)
Q Consensus 81 ~---~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~-~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~i 156 (184)
. .|.|.|.|+|.++ .+++++.|+|.|.|+|||+|.|..+.|.. .|+|+.++|+.|++|.|+|+|.|.|+.++|+|
T Consensus 286 ~~~~~y~l~V~a~dd~~-~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i 364 (419)
T 3ubh_A 286 RQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLV 364 (419)
T ss_dssp TSCSEEEEEEEEECTTT-SCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEE
T ss_pred ccccEEEEEEEEEeCCC-CcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEE
Confidence 5 7999999997543 47888999999999999999999999987 79999999999999999999999999999999
Q ss_pred ecCCCcEEEEcCccEEEEcccccccc
Q psy8617 157 IPSNTSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 157 ~~~~~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
.. ++|.|++ +|+|++.+.++.|.
T Consensus 365 ~~--~~F~Id~-~G~i~~~~~ld~E~ 387 (419)
T 3ubh_A 365 SD--DHFAVDS-NGIIVNNKQLDADN 387 (419)
T ss_dssp SC--TTEEECT-TCEEEECSCSSSSC
T ss_pred cC--CcEEECC-CeEEEECcccCccc
Confidence 65 5899998 99999999999875
No 15
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.97 E-value=2.7e-31 Score=228.43 Aligned_cols=162 Identities=23% Similarity=0.315 Sum_probs=145.5
Q ss_pred CcCCCeEEEEEEEEeCCCC---CCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC-CCCC
Q psy8617 1 MVPCLFQILQVTAVDLDTG---NNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK-QPMD 76 (184)
Q Consensus 1 ~~p~Gt~v~~v~A~D~D~g---~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~-~~lD 76 (184)
.+|+|+.|+++.|+|+|.| .|+.++|+|.++.+. .+..++|.|++.+|.|++. +.||
T Consensus 120 ~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~-------------------~~~~~~F~id~~tG~i~~~~~~LD 180 (550)
T 3q2v_A 120 GAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPE-------------------LPHKNMFTVNRDTGVISVLTSGLD 180 (550)
T ss_dssp TCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESC-------------------CSSSCSEEECTTTCEEEECSSCCC
T ss_pred CCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCC-------------------CCcCCceEEcCCCeEEEEccCCCC
Confidence 3689999999999999988 789999999876530 1114699999999999985 7899
Q ss_pred cccccEEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCc--eEEE
Q psy8617 77 RETRDKFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNA--ALRY 154 (184)
Q Consensus 77 ~E~~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~--~i~y 154 (184)
||....|.|.|+|+|.++|.+++++.|+|.|.|+|||+|.|.+..|.+.|+|+ ++|+.|+++.|+|+|.+.|+ .++|
T Consensus 181 rE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~y 259 (550)
T 3q2v_A 181 RESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVY 259 (550)
T ss_dssp TTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEE
T ss_pred cccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEE
Confidence 99999999999999998889999999999999999999999999999999999 99999999999999999777 4679
Q ss_pred EEecC-CCcEEEE----cCccEEEEcccccccc
Q psy8617 155 SLIPS-NTSFQIN----PFSGKKSILYLHSVIH 182 (184)
Q Consensus 155 ~i~~~-~~~F~Id----~~tG~i~~~~~~~~~~ 182 (184)
+|... .+.|.|+ +.+|.|++.+.++.|.
T Consensus 260 si~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~ 292 (550)
T 3q2v_A 260 TVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEA 292 (550)
T ss_dssp EESSCSSCCEEEEECTTTCCEEEEESSCCCTTT
T ss_pred EEEeCCCCcEEEEecCCCccEEEEecccCCccc
Confidence 99874 3899998 7899999999999875
No 16
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.97 E-value=1.3e-30 Score=217.51 Aligned_cols=161 Identities=19% Similarity=0.248 Sum_probs=137.7
Q ss_pred CeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccc---c
Q psy8617 5 LFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETR---D 81 (184)
Q Consensus 5 Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~---~ 81 (184)
..+|.+|+|+|+|.|.|+.++|+|..+.. ...|+|..+ ..+|.|+ .+|.|++++.||||.. .
T Consensus 8 ~~Pv~~v~AtD~D~g~n~~v~Ysi~~~~~----------~~~F~I~~~----~~~f~v~-~tG~i~~~~~LD~E~~~~~~ 72 (419)
T 3ubh_A 8 VRPTKRIEFTEADGDTEGKSVFQLEKETD----------KETFKIRDD----NPWVTVE-TNGAVRVKKKWDYEELGPEK 72 (419)
T ss_dssp EEEEEEEEEEGGGGCSTTCEEEECCCSST----------TCEEEESSC----CSSEEEC-TTSEEEESSCCCGGGSCTTC
T ss_pred ccceEEEEEEcccCCCCceEEEEEecCCC----------CceEEEcCC----CccEEEC-CCcEEEECCccCccccCccc
Confidence 46899999999999999999999976544 245666543 2367775 6999999999999997 6
Q ss_pred EEEEEEEEEeCCCC---cccceEEEEEEEecCCCCCCccCCCc--eEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEE
Q psy8617 82 KFLLKIAACDNGTP---VSTAYATVAINVLDANDNDPKFSKQD--YEFSIEENLPRGTVVGSVKATDEDLASNAALRYSL 156 (184)
Q Consensus 82 ~~~l~v~a~d~~~p---~~~~~~~v~I~v~d~Nd~~P~f~~~~--~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~i 156 (184)
.|.|.|.|+|.+.| .+++.+.|+|.|.|+|||+|.|.... |.+.|+|++++|+.|+++.|+|+|.|.| ++|+|
T Consensus 73 ~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i 150 (419)
T 3ubh_A 73 TIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFI 150 (419)
T ss_dssp EEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEE
T ss_pred eEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEE
Confidence 89999999998755 57788999999999999999999876 7899999999999999999999999866 99999
Q ss_pred ecCC--CcEEEEcCccEEEEcccccccc
Q psy8617 157 IPSN--TSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 157 ~~~~--~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
..++ .+|.|++.+|.|++.++++.|.
T Consensus 151 ~~~~~~~~F~I~~~tG~i~~~~~ld~e~ 178 (419)
T 3ubh_A 151 VRDRTGGRFEVDERSGVVRTRGTDLFQL 178 (419)
T ss_dssp EEESSSSCEEECTTTCEEEECSSSCCCB
T ss_pred EeCCCCCeEEEeCCceEEEEeccccccc
Confidence 8654 8999999999999998877653
No 17
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.97 E-value=3.2e-31 Score=228.30 Aligned_cols=162 Identities=24% Similarity=0.282 Sum_probs=144.0
Q ss_pred CcCCCeEEEEEEEEeCCCC--CCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECC-CCCc
Q psy8617 1 MVPCLFQILQVTAVDLDTG--NNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQ-PMDR 77 (184)
Q Consensus 1 ~~p~Gt~v~~v~A~D~D~g--~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~-~lD~ 77 (184)
.+|+|+.|++++|+|+|.| .|+.++|+|.++... ....++|.|++.+|+|++.+ .|||
T Consensus 120 n~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~~LD~ 180 (559)
T 3q2w_A 120 GSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPS-------------------TPSPNMFTINNETGDIITVAAGLDR 180 (559)
T ss_dssp TCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESC-------------------CSCTTCEEECTTTCEEEECCSCCCT
T ss_pred CCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCC-------------------CCCcceEEEeCCceEEEEEeccCCc
Confidence 3689999999999999987 689999999876541 01126899999999999987 9999
Q ss_pred ccccEEEEEEEEEeCCC---CcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCC--CceE
Q psy8617 78 ETRDKFLLKIAACDNGT---PVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLAS--NAAL 152 (184)
Q Consensus 78 E~~~~~~l~v~a~d~~~---p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~--n~~i 152 (184)
|....|.|.|+|+|.++ +.+++++.|+|.|.|+|||+|.|.+..|.+.|+|+. +|+.|+++.|+|+|.+. |+.+
T Consensus 181 E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~ 259 (559)
T 3q2w_A 181 EKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNA 259 (559)
T ss_dssp TTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSB
T ss_pred ccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeE
Confidence 99999999999999864 458899999999999999999999999999999996 89999999999999975 6689
Q ss_pred EEEEecCC--CcEEE----EcCccEEEEcccccccc
Q psy8617 153 RYSLIPSN--TSFQI----NPFSGKKSILYLHSVIH 182 (184)
Q Consensus 153 ~y~i~~~~--~~F~I----d~~tG~i~~~~~~~~~~ 182 (184)
+|+|..++ +.|.| ++.+|.|++.+.+++|.
T Consensus 260 ~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~ 295 (559)
T 3q2w_A 260 AYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFET 295 (559)
T ss_dssp CCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTT
T ss_pred EEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCcc
Confidence 99998875 89999 47899999999999875
No 18
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.97 E-value=6.6e-31 Score=226.40 Aligned_cols=159 Identities=28% Similarity=0.331 Sum_probs=142.9
Q ss_pred CeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccccEEE
Q psy8617 5 LFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRDKFL 84 (184)
Q Consensus 5 Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~~~~ 84 (184)
|+....+.+.+.|.+.|+.++|+|.++..+ .++.++|.|++.+|+|++.++||||+...|.
T Consensus 15 g~~~~~i~~~~~D~~~n~~i~Ysi~~~~~~-------------------~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~ 75 (559)
T 3q2w_A 15 GPFPQELVRIRSDRDKNLSLRYSVTGPGAD-------------------QPPTGIFIINPISGQLSVTKPLDRELIARFH 75 (559)
T ss_dssp CCSSEEEEECCCGGGGTSCEEEEEESBTTT-------------------BSSTTSEEECTTTCEEEECSCCCTTTCSEEE
T ss_pred CCCCeEEEEEeeCCCCCcEEEEEEECCCCC-------------------CCCCceEEEeCCceEEEECCccCCCCCceEE
Confidence 666677888888888899999999876541 1124799999999999999999999999999
Q ss_pred EEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCC--CCceEEEEEecCC--
Q psy8617 85 LKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLA--SNAALRYSLIPSN-- 160 (184)
Q Consensus 85 l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~--~n~~i~y~i~~~~-- 160 (184)
|.|.|+|.+++.++.++.+.|.|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.+ .|+.++|+|.++.
T Consensus 76 l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~ 155 (559)
T 3q2w_A 76 LRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPS 155 (559)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESC
T ss_pred EEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCC
Confidence 999999999998999999999999999999999999999999999999999999999999987 6899999998653
Q ss_pred ----CcEEEEcCccEEEEcc-cccccc
Q psy8617 161 ----TSFQINPFSGKKSILY-LHSVIH 182 (184)
Q Consensus 161 ----~~F~Id~~tG~i~~~~-~~~~~~ 182 (184)
..|.|++.||+|++.+ .+++|.
T Consensus 156 ~~~~~~F~Id~~tG~i~~~~~~LD~E~ 182 (559)
T 3q2w_A 156 TPSPNMFTINNETGDIITVAAGLDREK 182 (559)
T ss_dssp CSCTTCEEECTTTCEEEECCSCCCTTT
T ss_pred CCCcceEEEeCCceEEEEEeccCCccc
Confidence 6899999999999988 888875
No 19
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.97 E-value=1.1e-30 Score=234.74 Aligned_cols=162 Identities=26% Similarity=0.296 Sum_probs=145.8
Q ss_pred CcCCCeEEEEEEEEeCCCC---CCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC-CCCC
Q psy8617 1 MVPCLFQILQVTAVDLDTG---NNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK-QPMD 76 (184)
Q Consensus 1 ~~p~Gt~v~~v~A~D~D~g---~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~-~~lD 76 (184)
.+|+||.|++|+|+|+|.| .|+.++|+|.++.+. .+..++|.|++.+|.|++. +.||
T Consensus 275 n~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~-------------------~~~~~~F~Id~~tG~I~~~~~~LD 335 (880)
T 1q55_A 275 GVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPE-------------------EPIPNLFTINRETGVISLIGTGLD 335 (880)
T ss_dssp TCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSC-------------------CSCSCSEEECTTTCEEEECSCCCC
T ss_pred CCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCC-------------------cccCCeEEEccCCccEEEecccCC
Confidence 3689999999999999998 689999999877630 0114699999999999996 7899
Q ss_pred cccccEEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCC--CCCCceEEE
Q psy8617 77 RETRDKFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDED--LASNAALRY 154 (184)
Q Consensus 77 ~E~~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D--~~~n~~i~y 154 (184)
||....|.|.|+|+|.++|.+++++.|+|+|.|+|||+|.|.+..|.+.|+|+ ++|+.|++|.|+|+| .+.|+.++|
T Consensus 336 rE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Y 414 (880)
T 1q55_A 336 REKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVY 414 (880)
T ss_dssp TTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEEC
T ss_pred HHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEE
Confidence 99999999999999999888999999999999999999999999999999999 999999999999999 678999999
Q ss_pred EEec-CCCcEEEE--c--CccEEEEcccccccc
Q psy8617 155 SLIP-SNTSFQIN--P--FSGKKSILYLHSVIH 182 (184)
Q Consensus 155 ~i~~-~~~~F~Id--~--~tG~i~~~~~~~~~~ 182 (184)
+|.+ ...+|.|+ + .+|.|++.+.++.|.
T Consensus 415 si~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~ 447 (880)
T 1q55_A 415 KIRVNEGGFFNITTDPESNQGILTTAKGLDFEL 447 (880)
T ss_dssp CBSCCTTSCEEEEECTTTCCEEEEESSCCCCSS
T ss_pred EEecCCCceEEEEecCCCceEEEecccCCCccc
Confidence 9987 23899995 3 689999999999875
No 20
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.97 E-value=1.6e-30 Score=223.45 Aligned_cols=155 Identities=25% Similarity=0.301 Sum_probs=143.2
Q ss_pred CCCeEEEEEEEEeCC--CCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEe----CcccEEEECCCCC
Q psy8617 3 PCLFQILQVTAVDLD--TGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIM----PNTGWLSLKQPMD 76 (184)
Q Consensus 3 p~Gt~v~~v~A~D~D--~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~----~~tG~i~~~~~lD 76 (184)
|+|+.|++|.|+|+| .|.|+.++|+|.+ .. .++|.|+ ..+|.|+++++||
T Consensus 240 ~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~-----------------------~~~F~I~~d~~~~~G~i~~~~~LD 295 (546)
T 1l3w_A 240 EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NE-----------------------GGFFNITTDPESNQGILTTAKGLD 295 (546)
T ss_dssp SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CT-----------------------TSCEEEEECTTTCCEEEEESSCCC
T ss_pred CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-CC-----------------------CceEEEEecCCCCeEEEEECccCC
Confidence 689999999999999 7789999999987 43 5699996 2689999999999
Q ss_pred cccccEEEEEEEEEeCCC---CcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEE
Q psy8617 77 RETRDKFLLKIAACDNGT---PVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALR 153 (184)
Q Consensus 77 ~E~~~~~~l~v~a~d~~~---p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~ 153 (184)
||....|.|.|.|+|.+. |.+++++.|+|.|.|+|| +|.|.+..|.+.|+|+.++|+.|++|.|+|+|.|.|+.++
T Consensus 296 ~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ 374 (546)
T 1l3w_A 296 FELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLS 374 (546)
T ss_dssp CSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEE
T ss_pred cccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEE
Confidence 999999999999999863 568899999999999999 9999999999999999999999999999999999999999
Q ss_pred EEEecCC-CcEEEEcCccEEEEcccccccc
Q psy8617 154 YSLIPSN-TSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 154 y~i~~~~-~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
|+|.++. ++|.|++.+|.|++.+.+++|.
T Consensus 375 ysi~~~~~~~F~Id~~tG~i~~~~~lD~E~ 404 (546)
T 1l3w_A 375 YFIGNDPARWLTVNKDNGIVTGNGNLDRES 404 (546)
T ss_dssp EEECCCSSCCCEEETTTTEEEECSCCCTTS
T ss_pred EEECCCCCCcEEEeCCcEEEEECCccCCcc
Confidence 9998864 8999999999999999999885
No 21
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.97 E-value=6.9e-30 Score=219.66 Aligned_cols=155 Identities=20% Similarity=0.336 Sum_probs=142.3
Q ss_pred CCCeEEEEEEEEeCCCCCCc--EEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEe----CcccEEEECCCCC
Q psy8617 3 PCLFQILQVTAVDLDTGNNA--RITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIM----PNTGWLSLKQPMD 76 (184)
Q Consensus 3 p~Gt~v~~v~A~D~D~g~n~--~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~----~~tG~i~~~~~lD 76 (184)
++|+.|+++.|+|+|.+.|+ .++|+|.. .. .++|.|+ +.+|.|++++.||
T Consensus 234 ~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~~-----------------------~~~F~i~~d~~~~tG~i~~~~~LD 289 (550)
T 3q2v_A 234 EVNARIATLKVTDDDAPNTPAWKAVYTVVN-DP-----------------------DQQFVVVTDPTTNDGILKTAKGLD 289 (550)
T ss_dssp CSSCCCEEECEECCSCTTSTTTCEEEEESS-CS-----------------------SCCEEEEECTTTCCEEEEESSCCC
T ss_pred CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-CC-----------------------CCcEEEEecCCCccEEEEecccCC
Confidence 67999999999999988776 46699987 33 5799998 7899999999999
Q ss_pred cccccEEEEEEEEEeCC---CCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEE
Q psy8617 77 RETRDKFLLKIAACDNG---TPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALR 153 (184)
Q Consensus 77 ~E~~~~~~l~v~a~d~~---~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~ 153 (184)
||....|.|.|.|+|.+ .|.+++++.|+|.|.|+|| +|.|....|.+.|+|++++|+.|+++.|+|+|.|.|+.++
T Consensus 290 ~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~ 368 (550)
T 3q2v_A 290 FEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKIT 368 (550)
T ss_dssp TTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCE
T ss_pred ccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEE
Confidence 99999999999999987 3557899999999999999 9999999999999999999999999999999999999999
Q ss_pred EEEecCC-CcEEEEcCccEEEEcccccccc
Q psy8617 154 YSLIPSN-TSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 154 y~i~~~~-~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
|+|.+.. .+|.|++.+|.|++.+.+++|.
T Consensus 369 y~i~~~~~~~f~id~~tG~i~~~~~lDrE~ 398 (550)
T 3q2v_A 369 YRIWRDTANWLEINPETGAIFTRAEMDRED 398 (550)
T ss_dssp EEEEECTTCCEEECTTTCEEEECSCCCTTC
T ss_pred EEEecCCCCcEEEeCCCcEEEECCccCccc
Confidence 9998764 8999999999999999999885
No 22
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.96 E-value=1.3e-29 Score=197.23 Aligned_cols=157 Identities=20% Similarity=0.223 Sum_probs=129.6
Q ss_pred cCCCeEEEEEEEEe-CCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC---CCCCc
Q psy8617 2 VPCLFQILQVTAVD-LDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK---QPMDR 77 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D-~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~---~~lD~ 77 (184)
+|+||.|+.+.+.| .|.++|+.++|+|.+.. ..+|.|++.+|.+++. +.|||
T Consensus 30 sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~------------------------~~~f~id~~tg~~~l~~t~~~LDr 85 (242)
T 4apx_B 30 SRNGTILVDNMLIKGTAGGPDPTIELSLKDNV------------------------DYWVLLDPVKQMLFLNSTGRVLDR 85 (242)
T ss_dssp CCTTCEEESCCCBSSCBSSSSCSEEEEEESCG------------------------GGCEEEETTTTEEEECCTTSCCCC
T ss_pred CCCCCEEEEEEEecCCCCCCCCEEEEEEecCC------------------------CceEEECCCCCEEEEEecCCceec
Confidence 68899887755554 44667888999987654 3689999999999875 67999
Q ss_pred ccccEEEEEEEEEeCCC--CcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEE-----EEEEeCCCCCCc
Q psy8617 78 ETRDKFLLKIAACDNGT--PVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGS-----VKATDEDLASNA 150 (184)
Q Consensus 78 E~~~~~~l~v~a~d~~~--p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~-----v~a~D~D~~~n~ 150 (184)
|....|.+.+.+.+... ....+.+.|+|.|.|+|||+|.|.+..|.+.|+|++++|+.|++ +.|+|+|.|.|+
T Consensus 86 E~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~ 165 (242)
T 4apx_B 86 DPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNG 165 (242)
T ss_dssp STTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGG
T ss_pred cCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCC
Confidence 99877765555554332 23456678999999999999999999999999999999999976 789999999999
Q ss_pred eEEEEEecCC------CcEEEEc-CccEEEEcccccccc
Q psy8617 151 ALRYSLIPSN------TSFQINP-FSGKKSILYLHSVIH 182 (184)
Q Consensus 151 ~i~y~i~~~~------~~F~Id~-~tG~i~~~~~~~~~~ 182 (184)
.|+|+|..++ ..|.|++ .||+|++++.++.|.
T Consensus 166 ~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~ 204 (242)
T 4apx_B 166 QIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYED 204 (242)
T ss_dssp CEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTT
T ss_pred ceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhh
Confidence 9999999764 4699995 699999999999874
No 23
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.96 E-value=2.1e-29 Score=226.28 Aligned_cols=155 Identities=25% Similarity=0.316 Sum_probs=143.2
Q ss_pred CCCeEEEEEEEEeCC--CCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEe--C--cccEEEECCCCC
Q psy8617 3 PCLFQILQVTAVDLD--TGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIM--P--NTGWLSLKQPMD 76 (184)
Q Consensus 3 p~Gt~v~~v~A~D~D--~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~--~--~tG~i~~~~~lD 76 (184)
|+|+.|++|.|+|+| .|.|+.++|+|.+ .. .++|.|+ + .+|.|+++++||
T Consensus 389 ~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~-----------------------~~~F~I~~d~~~~~G~i~~~~~LD 444 (880)
T 1q55_A 389 EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NE-----------------------GGFFNITTDPESNQGILTTAKGLD 444 (880)
T ss_dssp SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CT-----------------------TSCEEEEECTTTCCEEEEESSCCC
T ss_pred CCCcEEEEEEEECCCCCCCCCceEEEEEec-CC-----------------------CceEEEEecCCCceEEEecccCCC
Confidence 689999999999999 6789999999987 44 5799995 3 689999999999
Q ss_pred cccccEEEEEEEEEeCC---CCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEE
Q psy8617 77 RETRDKFLLKIAACDNG---TPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALR 153 (184)
Q Consensus 77 ~E~~~~~~l~v~a~d~~---~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~ 153 (184)
||....|.|.|.|+|.+ .|.+++++.|+|+|.|+|| +|.|.+..|.+.|+|+.++|+.|++|.|+|+|.+.|+.++
T Consensus 445 ~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~ 523 (880)
T 1q55_A 445 FELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLS 523 (880)
T ss_dssp CSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEE
T ss_pred cccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEE
Confidence 99999999999999986 3558899999999999999 9999999999999999999999999999999999999999
Q ss_pred EEEecCC-CcEEEEcCccEEEEcccccccc
Q psy8617 154 YSLIPSN-TSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 154 y~i~~~~-~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
|+|.++. .+|.|++.||.|++.+.++.|.
T Consensus 524 Ysi~~~~~~~F~Id~~tG~I~~~~~LDrE~ 553 (880)
T 1q55_A 524 YFIGNDPARWLTVNKDNGIVTGNGNLDRES 553 (880)
T ss_dssp EEECCCSSCCCEEETTTTEEEECSCCCTTS
T ss_pred EEECCCCCCCEEEeCCccEEEECCccCccc
Confidence 9998864 8999999999999999999885
No 24
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=8.6e-25 Score=152.59 Aligned_cols=93 Identities=35% Similarity=0.513 Sum_probs=86.3
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
+|+|+.|++|+|+|+|.|.|++++|+|.++.. ....+|.|++.+|.|++++.||||...
T Consensus 27 ~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~---------------------~~~~~F~Id~~tG~I~~~~~LD~E~~~ 85 (119)
T 2yst_A 27 SAPGTPILQLRAADLDVGVNGQIEYVFGAATE---------------------SVRRLLRLDETSGWLSVLHRIDREEVN 85 (119)
T ss_dssp CCTTCEEEECCCCCSSSSCCSCCCCEECSCCT---------------------THHHHEEECTTTCEEEECSCCCTTTCS
T ss_pred CCCCCEEEEEEEEeCCCCCCCeEEEEEecCCC---------------------ccccEEEEeCCceEEEECccCCcccCC
Confidence 68999999999999999999999999987653 013699999999999999999999999
Q ss_pred EEEEEEEEEeCCCCcccceEEEEEEEecCCCCCC
Q psy8617 82 KFLLKIAACDNGTPVSTAYATVAINVLDANDNDP 115 (184)
Q Consensus 82 ~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P 115 (184)
.|.|.|.|+|.|.|++++++.|+|.|.|+|||+|
T Consensus 86 ~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 86 QLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp EEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred EEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 9999999999999999999999999999999998
No 25
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=2.9e-25 Score=155.90 Aligned_cols=99 Identities=28% Similarity=0.340 Sum_probs=88.7
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
+|+|+.|++|. +|+|.|.|+.|+|+|.++... ....++|.|++.+|.|++++.||||...
T Consensus 25 ~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 84 (123)
T 2yqg_A 25 LSKKNPIAKIH-SDLAEERGLKITYKYTGKGIT-------------------EPPFGIFVFNKDTGELNVTSILDREETP 84 (123)
T ss_dssp CCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTT-------------------BSSCSSEEEETTTTEEEECSCCBTTTBS
T ss_pred CCCCCEEEEEE-ECCCCCCCceEEEEEecCCCC-------------------CCcCCCEEEeCCcCEEEECcccCcccCc
Confidence 58999999999 699999999999999876320 0114699999999999999999999999
Q ss_pred EEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCC
Q psy8617 82 KFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQ 120 (184)
Q Consensus 82 ~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~ 120 (184)
.|.|.|.|+|.+.|++++++.|.|.|.|+|||+|.|.++
T Consensus 85 ~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 85 FFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp EEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred eEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 999999999999999999999999999999999999763
No 26
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.89 E-value=3.4e-23 Score=142.53 Aligned_cols=94 Identities=28% Similarity=0.431 Sum_probs=72.7
Q ss_pred cCCCeE--EEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccc
Q psy8617 2 VPCLFQ--ILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRET 79 (184)
Q Consensus 2 ~p~Gt~--v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~ 79 (184)
+|+|+. |+++ |.|.|.|+.++|+|.++... ....++|.|++.+|.|+++++||||.
T Consensus 15 ~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~LDrE~ 72 (110)
T 1ncg_A 15 SRGPFPQELVRI---RSGRDKNLSLRYSVTGPGAD-------------------QPPTGIFIINPISGQLSVTKPLDREL 72 (110)
T ss_dssp CCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTT-------------------BSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred CCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCC-------------------CCcCCEEEEECCCCEEEECCcCCccc
Confidence 688985 5554 77888899999999875310 01157999999999999999999999
Q ss_pred ccEEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCcc
Q psy8617 80 RDKFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKF 117 (184)
Q Consensus 80 ~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f 117 (184)
...|.|.|.|+|.+.|++++++.|.|.|.|+|||+|.|
T Consensus 73 ~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 73 IARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp CCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred CCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 99999999999999999999999999999999999988
No 27
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.88 E-value=5.4e-23 Score=160.29 Aligned_cols=93 Identities=19% Similarity=0.237 Sum_probs=85.3
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
+|+|+.|++|.|+|+|.|.|++++|+|.++.. .+|.|++.+|+|++++.||||...
T Consensus 152 ~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~------------------------~~F~Id~~tG~i~~~~~LDrE~~~ 207 (246)
T 2x2u_A 152 RPPGTFHQFRLLPVQFLCPQISVAYRLLEGEG------------------------LPFRSAPDSLEVSTRWALDREQRE 207 (246)
T ss_dssp SCCCEEEECSCHHHHHHCTTSCEEEEEESCTT------------------------SSEECCTTCCEEEESSCBCTTTCS
T ss_pred CCCCcEEEEEEEEcCCCCCCcEEEEEEccCCC------------------------CCEEEECCcCEEEeCCccCccccc
Confidence 68999999999999999999999999988753 589999999999999999999999
Q ss_pred EEEEEEEEEe-CCCCcccceEEEEEEEecCCCCCCccC
Q psy8617 82 KFLLKIAACD-NGTPVSTAYATVAINVLDANDNDPKFS 118 (184)
Q Consensus 82 ~~~l~v~a~d-~~~p~~~~~~~v~I~v~d~Nd~~P~f~ 118 (184)
.|.|.|.|+| .++|++++++.|.|+|.|+|||+|.|.
T Consensus 208 ~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 208 KYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred eEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 9999999998 667889999999999999999999995
No 28
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=135.75 Aligned_cols=88 Identities=31% Similarity=0.432 Sum_probs=78.8
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
+|+|+.|++|+|+|+|.|.|++++|+|.+..+. ...++|.|++.+|.|+++++||||...
T Consensus 27 ~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~--------------------~~~~~F~Id~~tG~I~~~~~LD~E~~~ 86 (114)
T 2ee0_A 27 APVGTSVIQLHATDADIGSNAEIRYIFGAQVAP--------------------ATKRLFALNNTTGLITVQRSLDREETA 86 (114)
T ss_dssp CCTTCEEEECCCCSCSSCCCSCCEEEECSSCCH--------------------HHHHHEEECTTTCEEEECSCCCTTTCS
T ss_pred CCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCC--------------------CccceEEEeCCeeEEEECccCCcccCc
Confidence 689999999999999999999999999764320 015799999999999999999999999
Q ss_pred EEEEEEEEEeCCCCcccceEEEEEEEecCC
Q psy8617 82 KFLLKIAACDNGTPVSTAYATVAINVLDAN 111 (184)
Q Consensus 82 ~~~l~v~a~d~~~p~~~~~~~v~I~v~d~N 111 (184)
.|.|.|.|+|.+.|+ +++.|+|.|.|+|
T Consensus 87 ~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 87 IHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp EEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 999999999999875 7789999999997
No 29
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.85 E-value=3.5e-21 Score=147.21 Aligned_cols=90 Identities=29% Similarity=0.448 Sum_probs=77.2
Q ss_pred cCCCeEEEEEEEEeCCC---CCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC-CCCCc
Q psy8617 2 VPCLFQILQVTAVDLDT---GNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK-QPMDR 77 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~---g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~-~~lD~ 77 (184)
+|+|+.|++|+|+|+|. |.|++++|+|.++.. .|.|++.+|.|+++ +.|||
T Consensus 120 ~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~-------------------------~F~Id~~tG~I~~~~~~LD~ 174 (215)
T 2a4e_A 120 SNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQP-------------------------YFSVEAQTGIIRTALPNMDR 174 (215)
T ss_dssp CCTTCEEEECCEECSSCTTTCSSSCCEEEEEESTT-------------------------TEEECTTTCEEEECSSCCCS
T ss_pred CCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCCC-------------------------cEEEeCCccEEEEcccCCCc
Confidence 68999999999999997 889999999987654 89999999999999 99999
Q ss_pred ccccEEEEEEEEEeCCCC--cccceEEEEEEEecCCCCCCc
Q psy8617 78 ETRDKFLLKIAACDNGTP--VSTAYATVAINVLDANDNDPK 116 (184)
Q Consensus 78 E~~~~~~l~v~a~d~~~p--~~~~~~~v~I~v~d~Nd~~P~ 116 (184)
|....|.|.|.|+|.|.| ++++++.|+|+|.|+|||+|+
T Consensus 175 E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 175 EAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp SSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred ccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 999999999999999976 588999999999999999995
No 30
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=7.9e-23 Score=143.71 Aligned_cols=96 Identities=20% Similarity=0.290 Sum_probs=82.5
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEE---EEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARI---TYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRE 78 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i---~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E 78 (184)
+|+||.|++| |+|.|.+. +.+ +|+|.++.. .++|.|++.||.|+++++||||
T Consensus 21 ~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~-----------------------~~~F~Id~~tG~i~~~~~LDRE 75 (125)
T 1wyj_A 21 TDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGN-----------------------KQLLQLEQKSGNLLLKEKLDRE 75 (125)
T ss_dssp CCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSS-----------------------SCSEEECSSSSEEEESSCCCST
T ss_pred CCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCC-----------------------CCeEEEECCccEEEECccccch
Confidence 6899999999 99998754 334 899987655 5799999999999999999999
Q ss_pred cc----cEEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCCCceEEE
Q psy8617 79 TR----DKFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSKQDYEFS 125 (184)
Q Consensus 79 ~~----~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~ 125 (184)
.. ..|.|.|.|.+. .| . ..+.|.|.|.|+|||+|.|.++.|.+.
T Consensus 76 ~~c~~~~~y~l~v~a~~~-~p-~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 76 ELCGSTNPCILHFQVLLK-SP-V-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp TTCTTCSSCCBCCEEEET-TT-T-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred hhcccCCcEEEEEEEEEC-CC-C-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 99 999999999974 33 3 477899999999999999999988654
No 31
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.85 E-value=8.6e-21 Score=128.01 Aligned_cols=82 Identities=24% Similarity=0.322 Sum_probs=76.0
Q ss_pred CCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccccE
Q psy8617 3 PCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRDK 82 (184)
Q Consensus 3 p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~~ 82 (184)
|.|+.|++|+ +|+|.| |++++|+|.++.. .+.|.|++.+|.|++.++||||+...
T Consensus 17 ~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~-----------------------~~~F~Id~~tG~i~~~~~LDrE~~~~ 71 (99)
T 1zvn_A 17 TDPLYVGKLH-SDMDRG-DGSIKYILSGEGA-----------------------GIVFTIDDTTGDIHAIQRLDREERSQ 71 (99)
T ss_dssp SSCEEEEECC-BTTCCS-SSCEEEEEEETTB-----------------------TTTEEECTTTCEEEECSCCCTTTCSE
T ss_pred CCCcEEEEEE-ECCCCC-CCEEEEEEeCCCC-----------------------CceEEEeCCCCCEEECeecCCccCCe
Confidence 4689999999 999999 9999999987654 46899999999999999999999999
Q ss_pred EEEEEEEEeCC-CCcccceEEEEEEEec
Q psy8617 83 FLLKIAACDNG-TPVSTAYATVAINVLD 109 (184)
Q Consensus 83 ~~l~v~a~d~~-~p~~~~~~~v~I~v~d 109 (184)
|.|.|.|+|.| +|++++.+.|.|.|.|
T Consensus 72 y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 72 YTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp EEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred EEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 99999999999 5899999999999987
No 32
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.85 E-value=8.6e-21 Score=127.81 Aligned_cols=82 Identities=28% Similarity=0.357 Sum_probs=73.9
Q ss_pred CCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccccE
Q psy8617 3 PCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRDK 82 (184)
Q Consensus 3 p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~~ 82 (184)
|+|+.|++|. +|+|.| |++|+|+|.+... .+.|.|++.+|.|+++++||||+...
T Consensus 16 p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~-----------------------~~~F~Id~~tG~i~~~~~LDrE~~~~ 70 (98)
T 1zxk_A 16 PEPILVGRLH-TDLDPG-SKKIKYILSGDGA-----------------------GTIFQINDITGDIHAIKRLDREEKAE 70 (98)
T ss_dssp SSCEEEEECC-BCCCCC---CEEEEEEETTB-----------------------TTTEEECTTTCEEEECSCCCTTTCSE
T ss_pred CCCeEEEEEE-ECCCCC-CCEEEEEEeCCCC-----------------------CCEEEEECCccEEEECccCCCcCCCe
Confidence 6899999998 999999 9999999987654 45899999999999999999999999
Q ss_pred EEEEEEEEeCCC-CcccceEEEEEEEec
Q psy8617 83 FLLKIAACDNGT-PVSTAYATVAINVLD 109 (184)
Q Consensus 83 ~~l~v~a~d~~~-p~~~~~~~v~I~v~d 109 (184)
|.|.|.|+|.|. |++++++.|.|.|.|
T Consensus 71 y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 71 YTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp EEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 999999999997 789999999999986
No 33
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.83 E-value=4.7e-20 Score=140.42 Aligned_cols=88 Identities=27% Similarity=0.368 Sum_probs=82.0
Q ss_pred cCCCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRD 81 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~ 81 (184)
+|+|+.|+++.|+|+|.|.|+.++|+|..+. ++|.|++.+|.|+++++||||...
T Consensus 122 ~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~-------------------------~~F~Id~~tG~i~~~~~LD~E~~~ 176 (210)
T 3mvs_A 122 TPVGTPIFIVNATDPDLGAGGSVLYSFQPPS-------------------------PFFAIDSARGIVTVIQELDYEVTQ 176 (210)
T ss_dssp CCTTCEEEECCEECCSSGGGGCEEEEESSCC-------------------------SSEEECTTTCEEEECSCCCTTTCS
T ss_pred CCCCCEEEEEEEEeCCCCCCceEEEEEeCCC-------------------------CCEEEeCCcEEEEECCcCCCcccc
Confidence 6899999999999999999999999997654 499999999999999999999999
Q ss_pred EEEEEEEEEeCC-CCcccceEEEEEEEecCCCCC
Q psy8617 82 KFLLKIAACDNG-TPVSTAYATVAINVLDANDND 114 (184)
Q Consensus 82 ~~~l~v~a~d~~-~p~~~~~~~v~I~v~d~Nd~~ 114 (184)
.|.|.|.|+|.+ .|++++++.++|.|.|+|||+
T Consensus 177 ~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 177 AYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp EEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred eEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 999999999998 467899999999999999985
No 34
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=3.4e-21 Score=133.31 Aligned_cols=78 Identities=32% Similarity=0.393 Sum_probs=73.1
Q ss_pred EEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecC-----CCcEEEEcCccEEEEccccc
Q psy8617 105 INVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALRYSLIPS-----NTSFQINPFSGKKSILYLHS 179 (184)
Q Consensus 105 I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~i~~~-----~~~F~Id~~tG~i~~~~~~~ 179 (184)
|.|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.|.|+.++|+|.+. ..+|.|++.||+|++++.++
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 4689999999999999999999999999999999999999999999999999863 38999999999999999999
Q ss_pred ccc
Q psy8617 180 VIH 182 (184)
Q Consensus 180 ~~~ 182 (184)
.|.
T Consensus 82 ~E~ 84 (114)
T 2ee0_A 82 REE 84 (114)
T ss_dssp TTT
T ss_pred ccc
Confidence 875
No 35
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=1.1e-20 Score=131.60 Aligned_cols=78 Identities=27% Similarity=0.357 Sum_probs=73.6
Q ss_pred EEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCC----CcEEEEcCccEEEEcccccc
Q psy8617 105 INVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALRYSLIPSN----TSFQINPFSGKKSILYLHSV 180 (184)
Q Consensus 105 I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~i~~~~----~~F~Id~~tG~i~~~~~~~~ 180 (184)
++|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.|.|+.++|+|.++. .+|.|++.||+|++++.+++
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 46899999999999999999999999999999999999999999999999999874 58999999999999999998
Q ss_pred cc
Q psy8617 181 IH 182 (184)
Q Consensus 181 ~~ 182 (184)
|.
T Consensus 82 E~ 83 (119)
T 2yst_A 82 EE 83 (119)
T ss_dssp TT
T ss_pred cc
Confidence 75
No 36
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.80 E-value=2e-19 Score=121.31 Aligned_cols=85 Identities=21% Similarity=0.230 Sum_probs=74.6
Q ss_pred cCC--CeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccc
Q psy8617 2 VPC--LFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRET 79 (184)
Q Consensus 2 ~p~--Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~ 79 (184)
+|+ |+.|++|+|+|+|. .++|+|.+... +....+.|.|++.+|.|+++++||||+
T Consensus 13 ~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~-------------------~~~~~~~F~Id~~tG~i~~~~~LDrE~ 69 (99)
T 3k6d_A 13 QRIPFPKIVGRVVVSDRIP----GSKIKLYGKGV-------------------DQEPKGIFKINENSGEVSVTKALDREA 69 (99)
T ss_dssp CCSCSSEEEEECBCSSCCT----TCEEEEESBTT-------------------TBSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred CCCCCCcEEEEEEEECCCC----cEEEEEecCcC-------------------CCCCCCEEEEECCceEEEECcCCCccc
Confidence 567 99999999999996 79999976421 001257999999999999999999999
Q ss_pred ccEEEEEEEEEeCCCCcccceEEEEEEEec
Q psy8617 80 RDKFLLKIAACDNGTPVSTAYATVAINVLD 109 (184)
Q Consensus 80 ~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d 109 (184)
...|.|.|.|+|.|+|++++.+.|.|.|.|
T Consensus 70 ~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 70 IPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp CCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred CceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 999999999999999999999999999987
No 37
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.80 E-value=3.6e-19 Score=121.32 Aligned_cols=85 Identities=20% Similarity=0.350 Sum_probs=73.3
Q ss_pred CCeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccccEE
Q psy8617 4 CLFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRDKF 83 (184)
Q Consensus 4 ~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~~~ 83 (184)
.|+.|++|.| | .|.|++++|+|.++... ..+.+.|.|++.+|.|+++++||||+...|
T Consensus 21 ~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~-------------------~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y 78 (105)
T 2omz_B 21 FPKNLVQIKS-N--KDKEGKVFYSITGQGAD-------------------TPPVGVFIIERETGWLKVTEPLDRERIATY 78 (105)
T ss_dssp SSEEEEECEE-G--GGGSSCCEEEEEEBTTT-------------------BSSTTSEEECTTTCEEEECSCCCTTTCCEE
T ss_pred CCcEEEEEEC-C--CCCCCeEEEEEeCCCCC-------------------CCccCEEEEeCCCCEEEECccCCcCCCCeE
Confidence 5889999999 3 35699999999876530 011468999999999999999999999999
Q ss_pred EEEEEEEeCCCCcccceEEEEEEEecC
Q psy8617 84 LLKIAACDNGTPVSTAYATVAINVLDA 110 (184)
Q Consensus 84 ~l~v~a~d~~~p~~~~~~~v~I~v~d~ 110 (184)
.|.|.|+|.|.|++++++.|.|.|.|+
T Consensus 79 ~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 79 TLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred EEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 999999999999999999999999985
No 38
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.79 E-value=4.9e-19 Score=119.63 Aligned_cols=82 Identities=22% Similarity=0.278 Sum_probs=72.7
Q ss_pred CeEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccccEEE
Q psy8617 5 LFQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRDKFL 84 (184)
Q Consensus 5 Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~~~~ 84 (184)
|+.|++|+|+|+|. .++|+|.+.... ..+.+.|.|++.+|.|+++++||||+...|.
T Consensus 19 g~~v~~V~A~D~D~----~i~Ysi~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~ 75 (100)
T 3k6f_A 19 PRDVGKVVDSDRPE----GSKFRLTGKGVD-------------------QDPKGTFRINENTGSVSVTRTLDRETIATYQ 75 (100)
T ss_dssp CEEEEECEETTCCT----TCEEEEEEBTTT-------------------BSSTTSEEECTTTCEEEECSCCCTTTCSEEE
T ss_pred CcEEEEEEEEcCCC----CEEEEEeCCCCC-------------------CCcCCEEEEECCCCEEEECcccCCcCCCEEE
Confidence 89999999999996 589999764320 0125799999999999999999999999999
Q ss_pred EEEEEEeCCCCcccceEEEEEEEec
Q psy8617 85 LKIAACDNGTPVSTAYATVAINVLD 109 (184)
Q Consensus 85 l~v~a~d~~~p~~~~~~~v~I~v~d 109 (184)
|.|.|+|.|.|++++.+.|.|.|.|
T Consensus 76 l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 76 LYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEECCCCcccceEEEEEEEEC
Confidence 9999999999999999999999987
No 39
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.79 E-value=1e-18 Score=117.86 Aligned_cols=85 Identities=18% Similarity=0.226 Sum_probs=74.2
Q ss_pred cCCC--eEEEEEEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccc
Q psy8617 2 VPCL--FQILQVTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRET 79 (184)
Q Consensus 2 ~p~G--t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~ 79 (184)
+|+| +.|++|+|+|+|. .++|+|.+.... ..+.+.|.|++.+|.|+++++||||+
T Consensus 13 ~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~LDrE~ 69 (99)
T 3k6i_A 13 QRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVD-------------------QDPKGIFRINEISGDVSVTRPLDREA 69 (99)
T ss_dssp CCSSSCEEEEECEETTCCS----SEEEEEESBTTT-------------------BSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred CCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCC-------------------CCcCCEEEEECCCcEEEECcccCCcc
Confidence 4565 9999999999996 799999864320 01257999999999999999999999
Q ss_pred ccEEEEEEEEEeCCCCcccceEEEEEEEec
Q psy8617 80 RDKFLLKIAACDNGTPVSTAYATVAINVLD 109 (184)
Q Consensus 80 ~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d 109 (184)
...|.|.|.|+|.|+|++++.+.|.|.|.|
T Consensus 70 ~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 70 IANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 999999999999999999999999999987
No 40
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.72 E-value=1.2e-17 Score=127.36 Aligned_cols=89 Identities=26% Similarity=0.334 Sum_probs=79.4
Q ss_pred cCCCeEEEEEEEEeCCCC---CCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC-CCCCc
Q psy8617 2 VPCLFQILQVTAVDLDTG---NNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK-QPMDR 77 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g---~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~-~~lD~ 77 (184)
+|+|+.|++|+|+|+|.| .|+.++|+|.++... .+..++|.|++.+|.|++. +.|||
T Consensus 121 ~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~~LD~ 181 (213)
T 3qrb_A 121 AVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPE-------------------LPHKNMFTVNRDTGVISVLTSGLDR 181 (213)
T ss_dssp CCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESC-------------------CSCSCSEEECTTTCEEEECSSCCCT
T ss_pred CCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCC-------------------CCcCCeEEEECCCcEEEEccCCCCC
Confidence 689999999999999998 899999999876530 0114699999999999997 78999
Q ss_pred ccccEEEEEEEEEeCCCCcccceEEEEEEEec
Q psy8617 78 ETRDKFLLKIAACDNGTPVSTAYATVAINVLD 109 (184)
Q Consensus 78 E~~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d 109 (184)
|....|.|.|.|+|.|.|++++++.|+|+|.|
T Consensus 182 E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 182 ESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp TTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred ccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 99999999999999999999999999999987
No 41
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.72 E-value=4.7e-17 Score=123.18 Aligned_cols=82 Identities=27% Similarity=0.393 Sum_probs=76.0
Q ss_pred cCCCeEEEEEEEEeCC---CCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC-CCCCc
Q psy8617 2 VPCLFQILQVTAVDLD---TGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK-QPMDR 77 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D---~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~-~~lD~ 77 (184)
+|+|+.|++|+|+|+| .|.|++++|+|.++.. +|.|+ .+|.|+++ +.|||
T Consensus 117 ~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~-------------------------~F~I~-~tG~i~~~~~~LD~ 170 (203)
T 3ppe_A 117 SRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGNE-------------------------YFTVD-DSGVIFTARADLDR 170 (203)
T ss_dssp CCTTCEEEECCEECCSCTTSSSTTCEEEEEEESTT-------------------------TEEEC-TTSEEEESCSCCCT
T ss_pred CCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCCC-------------------------cEEEe-CCeEEEECCcCCCc
Confidence 6899999999999999 4789999999988754 89999 99999999 99999
Q ss_pred ccccEEEEEEEEEeC-CCCcccceEEEEEEEec
Q psy8617 78 ETRDKFLLKIAACDN-GTPVSTAYATVAINVLD 109 (184)
Q Consensus 78 E~~~~~~l~v~a~d~-~~p~~~~~~~v~I~v~d 109 (184)
|....|.|.|.|+|. |.|++++++.|+|+|.|
T Consensus 171 E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 171 ESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp TTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred ccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 999999999999998 77889999999999987
No 42
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.71 E-value=2.9e-17 Score=124.64 Aligned_cols=83 Identities=33% Similarity=0.466 Sum_probs=74.8
Q ss_pred cCCCeEEEEEEEEeCCC---CCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC-CCCCc
Q psy8617 2 VPCLFQILQVTAVDLDT---GNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK-QPMDR 77 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~---g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~-~~lD~ 77 (184)
+|+|+.|++|+|+|+|. |.|+.++|+|.++. ..|.|++.+|.|+++ +.|||
T Consensus 119 ~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~-------------------------~~F~Id~~tG~i~~~~~~lD~ 173 (207)
T 3lnd_A 119 ADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ-------------------------PYFSVESETGIIKTALLNMDR 173 (207)
T ss_dssp CCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG-------------------------GGEEECTTTCEEEECCSSCCC
T ss_pred CCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC-------------------------CCEEEcCCCcEEEECcccCCc
Confidence 68999999999999997 78999999998764 389999999999999 99999
Q ss_pred ccccEEEEEEEEEeCCCC--cccceEEEEEEEec
Q psy8617 78 ETRDKFLLKIAACDNGTP--VSTAYATVAINVLD 109 (184)
Q Consensus 78 E~~~~~~l~v~a~d~~~p--~~~~~~~v~I~v~d 109 (184)
|....|.|.|.|+|.+.| ++++++.|+|+|.|
T Consensus 174 E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 174 ENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp --CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred ccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 999999999999999876 78999999999987
No 43
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.70 E-value=1.8e-17 Score=126.51 Aligned_cols=89 Identities=26% Similarity=0.290 Sum_probs=78.3
Q ss_pred cCCCeEEEEEEEEeCCC--CCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC-CCCCcc
Q psy8617 2 VPCLFQILQVTAVDLDT--GNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK-QPMDRE 78 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~--g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~-~~lD~E 78 (184)
+|+|+.|++|.|+|+|. |.|++++|+|.++.+. .+..+.|.|++.+|.|++. +.||||
T Consensus 121 ~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~~LD~E 181 (215)
T 2qvi_A 121 SKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPS-------------------TPSPNMFTINNETGDIITVAAGLDRE 181 (215)
T ss_dssp CCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSC-------------------CSSTTCEEECTTTCEEEECSCCCCTT
T ss_pred CCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCC-------------------CCcCCeEEEcCCCcEEEEecCCCCcc
Confidence 68899999999999998 7899999999887630 0115799999999999996 789999
Q ss_pred cccEEEEEEEEEeCCCC---cccceEEEEEEEec
Q psy8617 79 TRDKFLLKIAACDNGTP---VSTAYATVAINVLD 109 (184)
Q Consensus 79 ~~~~~~l~v~a~d~~~p---~~~~~~~v~I~v~d 109 (184)
....|.|.|.|+|.++| ++++++.|+|+|.|
T Consensus 182 ~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 182 KVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp TCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred cCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 99999999999999887 78999999999986
No 44
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.69 E-value=6.2e-17 Score=123.75 Aligned_cols=89 Identities=31% Similarity=0.345 Sum_probs=77.8
Q ss_pred cCCCeEEEEEEEEeCCC--CCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEEC---CCCC
Q psy8617 2 VPCLFQILQVTAVDLDT--GNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLK---QPMD 76 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~--g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~---~~lD 76 (184)
+|+|+.|++|+|+|+|. |.|++++|+|.++... ....++|.|++.+|.|++. +.||
T Consensus 121 ~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~-------------------~~~~~~F~Id~~tG~i~~~~~~~~LD 181 (218)
T 3k5r_A 121 SPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPD-------------------KPSPNMFYIDPEKGDIVTVVSPALLD 181 (218)
T ss_dssp CCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESC-------------------CSCSCSEEECTTTCEEEECSCGGGCC
T ss_pred CCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCC-------------------CCcCCEEEEECCccEEEEeccCCCCC
Confidence 68999999999999998 6899999999877541 0013689999999999987 6899
Q ss_pred ccc--ccEEEEEEEEEeCC--CCcccceEEEEEEEec
Q psy8617 77 RET--RDKFLLKIAACDNG--TPVSTAYATVAINVLD 109 (184)
Q Consensus 77 ~E~--~~~~~l~v~a~d~~--~p~~~~~~~v~I~v~d 109 (184)
||. ...|.|.|.|+|.| .|++++++.|+|+|.|
T Consensus 182 ~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 182 RETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp GGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred ccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 999 77999999999999 7889999999999987
No 45
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.65 E-value=1.8e-16 Score=123.11 Aligned_cols=89 Identities=25% Similarity=0.383 Sum_probs=75.1
Q ss_pred cCCCeEEEE-----EEEEeCCCCCCcEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeC-cccEEEECCCC
Q psy8617 2 VPCLFQILQ-----VTAVDLDTGNNARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMP-NTGWLSLKQPM 75 (184)
Q Consensus 2 ~p~Gt~v~~-----v~A~D~D~g~n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~-~tG~i~~~~~l 75 (184)
+|+|+.|++ |.|+|+|.|.|++|+|+|..+... ....+.|.|++ .+|.|++++.|
T Consensus 140 ~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~-------------------~~~~~~F~Id~~~tG~i~~~~~L 200 (242)
T 4apx_B 140 TPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPED-------------------PTSNDTFEIPLMLTGNVVLRKRL 200 (242)
T ss_dssp CCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTS-------------------TTHHHHEECSSTTTCCEEECSCC
T ss_pred cCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCC-------------------cccccceEEcCCCceEEEECCcC
Confidence 689999986 789999999999999999887641 11135799995 59999999999
Q ss_pred CcccccEEEEEEEEEeCCCCc---ccceEEEEEEEec
Q psy8617 76 DRETRDKFLLKIAACDNGTPV---STAYATVAINVLD 109 (184)
Q Consensus 76 D~E~~~~~~l~v~a~d~~~p~---~~~~~~v~I~v~d 109 (184)
|||....|.|.|.|+|.|.|+ +++.+.|+|+|..
T Consensus 201 D~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 201 NYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp CTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred ChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 999999999999999999886 5667788888764
No 46
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.60 E-value=8.5e-17 Score=109.12 Aligned_cols=83 Identities=22% Similarity=0.275 Sum_probs=65.5
Q ss_pred cCCCeEEEEEEEEeCCCCCC--cEEEEEEecCCCcccccCCCcceEEEEEeeCCcccccceEEeCcccEEEECCCCCccc
Q psy8617 2 VPCLFQILQVTAVDLDTGNN--ARITYKLIQDDTAVDLDTGNNARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRET 79 (184)
Q Consensus 2 ~p~Gt~v~~v~A~D~D~g~n--~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~ 79 (184)
+|+||.|++| |.|.|.+.+ +.++|+|.++.. ..+|.|++.||.|+++++||||+
T Consensus 13 ~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~-----------------------~~~F~Id~~tG~i~~~~~LDRE~ 68 (103)
T 1wuz_A 13 AKHGTFVGRI-AQDLGLELTELVPRLFRVASKDR-----------------------GDLLEVNLQNGILFVNSRIDREE 68 (103)
T ss_dssp CCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSC-----------------------SCSEEEETTTTEEEECSCCSHHH
T ss_pred CCCCCEEEEE-EeccCCCCcccccEEEEEEeCCC-----------------------ccEEEEECCeEEEEECCcCcccc
Confidence 6899999999 999886422 357899987654 57999999999999999999998
Q ss_pred cc------EEEEEEEEEeCCCCcccceEEEEEEEecCCCC
Q psy8617 80 RD------KFLLKIAACDNGTPVSTAYATVAINVLDANDN 113 (184)
Q Consensus 80 ~~------~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~ 113 (184)
.. .|.+.|.+ . .|. ..+.|.|.|.|+|||
T Consensus 69 ~~~~~~~~~~~~~v~~--~-~p~--~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 69 LCGRSAECSIHLEVIV--D-RPL--QVFHVEVEVRDINDN 103 (103)
T ss_dssp HCSSSSSCEEEEEEEE--T-TTT--EEEEEEEEEECCSCC
T ss_pred ccCCCCcEEEEEEEEE--C-CCC--EEEEEEEEEEEcCCC
Confidence 63 45555544 2 332 378999999999997
No 47
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=2.6e-13 Score=94.71 Aligned_cols=72 Identities=10% Similarity=0.140 Sum_probs=66.1
Q ss_pred CCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecC------CCcEEEEcCccEEEEcccccccc
Q psy8617 110 ANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALRYSLIPS------NTSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 110 ~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~i~~~------~~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
.+.+.|.|..+.|.+.+.|++++|+.|++|. +|+|.+.|+.++|+|.++ ..+|.|++.||+|++++.++.|.
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 82 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREE 82 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTT
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCccc
Confidence 4678999999999999999999999999999 699999999999999975 27999999999999999999885
No 48
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.27 E-value=4.8e-12 Score=84.95 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=53.7
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCC--CcEEEEcCccEEEEcccccccc
Q psy8617 122 YEFSIEENLP--RGTVVGSVKATDEDLASNAALRYSLIPSN--TSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 122 ~~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~i~y~i~~~~--~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
+.+.|+||.+ .|+.|++|+ +|+|.| |+.++|+|.++. ..|.|++.||.|++++.+|+|.
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 68 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREE 68 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTT
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCcc
Confidence 4688999976 689999999 999999 999999998865 6899999999999999999885
No 49
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.27 E-value=5.1e-12 Score=84.64 Aligned_cols=59 Identities=24% Similarity=0.316 Sum_probs=51.8
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCC--CcEEEEcCccEEEEcccccccc
Q psy8617 122 YEFSIEENLP--RGTVVGSVKATDEDLASNAALRYSLIPSN--TSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 122 ~~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~i~y~i~~~~--~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
+.+.|+||.+ +|+.|+++. +|+|.| |+.++|+|.+.. ..|.||+.||.|++++.+++|.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 67 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREE 67 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcC
Confidence 5789999985 899999997 999999 999999998864 5899999999999999999885
No 50
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.10 E-value=5.9e-11 Score=79.54 Aligned_cols=57 Identities=26% Similarity=0.207 Sum_probs=51.4
Q ss_pred eEEEEeCCCCC--CcEEEEEEEEeCCCCCCceEEEEEecC------CCcEEEEcCccEEEEcccccccc
Q psy8617 122 YEFSIEENLPR--GTVVGSVKATDEDLASNAALRYSLIPS------NTSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 122 ~~~~v~E~~~~--gt~v~~v~a~D~D~~~n~~i~y~i~~~------~~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
+.+.|+||.++ |+.|++|+|+|+|. .++|+|.+. ...|.|++.||+|++.+.+++|.
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 69 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREA 69 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCccc
Confidence 36789999999 99999999999996 799999862 27999999999999999999885
No 51
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.05 E-value=2.1e-10 Score=76.97 Aligned_cols=56 Identities=23% Similarity=0.246 Sum_probs=50.4
Q ss_pred EEEEeCCCCC--CcEEEEEEEEeCCCCCCceEEEEEecC------CCcEEEEcCccEEEEcccccccc
Q psy8617 123 EFSIEENLPR--GTVVGSVKATDEDLASNAALRYSLIPS------NTSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 123 ~~~v~E~~~~--gt~v~~v~a~D~D~~~n~~i~y~i~~~------~~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
.+.|+||.++ |+.|++|.|+|+|. .++|+|.+. ...|.|++.||+|++.+.+|+|.
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 70 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRET 70 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcC
Confidence 5789999998 89999999999997 699999863 27899999999999999999885
No 52
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.05 E-value=3e-10 Score=76.02 Aligned_cols=56 Identities=23% Similarity=0.224 Sum_probs=50.3
Q ss_pred EEEEeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEecC------CCcEEEEcCccEEEEcccccccc
Q psy8617 123 EFSIEENLPRG--TVVGSVKATDEDLASNAALRYSLIPS------NTSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 123 ~~~v~E~~~~g--t~v~~v~a~D~D~~~n~~i~y~i~~~------~~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
.+.|+||.+.| +.|++|.|+|+|. .++|+|.+. ...|.|++.||+|++++.+|+|.
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 69 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREA 69 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCcc
Confidence 46899999987 9999999999997 899999863 17899999999999999999885
No 53
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=98.99 E-value=9.1e-11 Score=81.94 Aligned_cols=63 Identities=21% Similarity=0.277 Sum_probs=54.0
Q ss_pred CCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceE---EEEEecCC--CcEEEEcCccEEEEccccccccc
Q psy8617 119 KQDYEFSIEENLPRGTVVGSVKATDEDLASNAAL---RYSLIPSN--TSFQINPFSGKKSILYLHSVIHM 183 (184)
Q Consensus 119 ~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i---~y~i~~~~--~~F~Id~~tG~i~~~~~~~~~~~ 183 (184)
...|.+.|+|+.++|+.|++| |.|.|.+. +.+ +|+|.+++ .+|.||+.||.|++.+.+|+|..
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~ 77 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREEL 77 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTT
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhh
Confidence 346778999999999999999 99988763 345 89998754 89999999999999999999864
No 54
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=98.98 E-value=3.6e-10 Score=77.11 Aligned_cols=59 Identities=24% Similarity=0.199 Sum_probs=50.7
Q ss_pred ceEEEEeCCCCCCcE--EEEEEEEeCCCCCCceEEEEEecC------CCcEEEEcCccEEEEcccccccc
Q psy8617 121 DYEFSIEENLPRGTV--VGSVKATDEDLASNAALRYSLIPS------NTSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 121 ~~~~~v~E~~~~gt~--v~~v~a~D~D~~~n~~i~y~i~~~------~~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
.|.+.|+|++++|+. |+++ |.|.+.|+.++|+|.++ ..+|.|++.||+|++++.+++|.
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 72 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREL 72 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCccc
Confidence 367899999999995 5554 77888899999999963 37999999999999999999884
No 55
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=98.93 E-value=5e-10 Score=75.79 Aligned_cols=57 Identities=16% Similarity=0.073 Sum_probs=49.2
Q ss_pred EEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCC------CcEEEEcCccEEEEcccccccc
Q psy8617 123 EFSIEENLP--RGTVVGSVKATDEDLASNAALRYSLIPSN------TSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 123 ~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~i~y~i~~~~------~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
.+.|+||.+ .|+.|+++.| | .+.|+.++|+|.+++ +.|.||+.||+|++++.+|+|.
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~ 74 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRER 74 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCC
Confidence 467999988 4889999999 3 356999999998864 4899999999999999999885
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=98.91 E-value=5e-11 Score=80.49 Aligned_cols=62 Identities=19% Similarity=0.230 Sum_probs=53.2
Q ss_pred CceEEEEeCCCCCCcEEEEEEEEeCCCCCC--ceEEEEEecCC--CcEEEEcCccEEEEcccccccc
Q psy8617 120 QDYEFSIEENLPRGTVVGSVKATDEDLASN--AALRYSLIPSN--TSFQINPFSGKKSILYLHSVIH 182 (184)
Q Consensus 120 ~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n--~~i~y~i~~~~--~~F~Id~~tG~i~~~~~~~~~~ 182 (184)
..+.+.|+|+.++|+.|++| |.|.|...+ +.++|+|.+++ ++|.|++.||.|++.+.+|+|.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~ 68 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREE 68 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHH
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCcccc
Confidence 45788999999999999999 999886422 36899998754 8999999999999999999885
No 57
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=89.77 E-value=1.8 Score=35.79 Aligned_cols=48 Identities=25% Similarity=0.378 Sum_probs=35.6
Q ss_pred ceEEe-CcccEEEECCCCCcccccEEEEEEEEEeCCCCcccceEEEEEEE
Q psy8617 59 TFHIM-PNTGWLSLKQPMDRETRDKFLLKIAACDNGTPVSTAYATVAINV 107 (184)
Q Consensus 59 ~F~I~-~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~p~~~~~~~v~I~v 107 (184)
...|. +....++++-+-+ +....|+|.+.++|.+.|.++++..|.|+|
T Consensus 388 ~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 388 SVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp CCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred ceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 44553 3445666655543 456789999999999988899999998887
No 58
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=87.41 E-value=0.64 Score=33.07 Aligned_cols=62 Identities=15% Similarity=0.252 Sum_probs=48.6
Q ss_pred CCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCC-cEEEEcCccEEEEcccc
Q psy8617 112 DNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALRYSLIPSNT-SFQINPFSGKKSILYLH 178 (184)
Q Consensus 112 d~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~i~~~~~-~F~Id~~tG~i~~~~~~ 178 (184)
.+-|-|.+..|...++-....|..|++|.-.|... +..+.|.- ++. -|.|++ .|.|++++.+
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~s--sDp~dFkV~~-DGtVya~r~v 93 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYES--SEPADFKVDE-DGTVYAVRSF 93 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEEC--CCSSEEEEET-TTEEEEESCC
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCCC--CCceeEEc--CCCCCeEEeC-CCcEEEecce
Confidence 46789999999777888889999999999998863 45566654 455 899986 7888888753
No 59
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=78.00 E-value=16 Score=25.84 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=23.6
Q ss_pred ceEEeCcccEEEECCCCCcccccEEEEEEEEEeCCC
Q psy8617 59 TFHIMPNTGWLSLKQPMDRETRDKFLLKIAACDNGT 94 (184)
Q Consensus 59 ~F~I~~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~ 94 (184)
-|.|.++ |.+++++.+-.-... -.|.|.|.|...
T Consensus 78 dFkV~~D-GtVya~r~v~L~~~~-~~F~V~a~D~~t 111 (159)
T 1op4_A 78 DFKVDED-GTVYAVRSFPLTAEQ-AKFLIYAQDKET 111 (159)
T ss_dssp EEEEETT-TEEEEESCCSCSSSC-EEEEEEEEETTT
T ss_pred CeEEeCC-CcEEEecceeecCCC-cEEEEEEEcCCC
Confidence 6999875 889998875433322 267789999543
No 60
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.92 E-value=6.3 Score=25.45 Aligned_cols=32 Identities=9% Similarity=0.224 Sum_probs=25.9
Q ss_pred cccEEEEEEEEEeCCCCcccceEEEEEEEecCCC
Q psy8617 79 TRDKFLLKIAACDNGTPVSTAYATVAINVLDAND 112 (184)
Q Consensus 79 ~~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd 112 (184)
....|.|++.++|..+ .+++..+.|.|...+.
T Consensus 67 ~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN--LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC--CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC--CEEEeEEEEEEcCCCC
Confidence 3568999999999976 5777888898887754
No 61
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=70.00 E-value=12 Score=24.29 Aligned_cols=52 Identities=13% Similarity=0.181 Sum_probs=37.3
Q ss_pred EEeCcccE----EEECCCCCcccccEEEEEEEEEeCCCCcccceEEEEEEEecCCCCC
Q psy8617 61 HIMPNTGW----LSLKQPMDRETRDKFLLKIAACDNGTPVSTAYATVAINVLDANDND 114 (184)
Q Consensus 61 ~I~~~tG~----i~~~~~lD~E~~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~ 114 (184)
..|...|. |.+....|-.+...|.+...++|..+ ..+++..+|.|.+..+..
T Consensus 35 A~D~~DGDlT~~I~V~g~Vdt~k~G~Y~VtY~VtDs~G--n~~t~trtVtV~~~~e~~ 90 (103)
T 2kpn_A 35 AIDKEDGDLTSKIKVDGEVDTTKAGTYVLTYTVTDSKG--HEVTAKQTVTVKVREEVK 90 (103)
T ss_dssp EECSSSCBCGGGCEEESCCCSSSCEEEEEEEEEECTTS--CEEEEEEEEEEECSSCCC
T ss_pred EEcCCCCCcceeEEEeCcccCCCceEEEEEEEEEcCCC--CEEEEEEEEEEeCCCccc
Confidence 44455554 44556788888899999999999877 455677788887765443
No 62
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick filament, immune system, cell adhesion; NMR {Mus musculus}
Probab=59.75 E-value=38 Score=23.04 Aligned_cols=65 Identities=17% Similarity=0.325 Sum_probs=41.4
Q ss_pred CcEEEEEEecCCCcccccCCCcceEEEEEeeC--CcccccceEEeCcccEEEEC-CCCCcccccEEEEEEEEEeCC
Q psy8617 21 NARITYKLIQDDTAVDLDTGNNARITYKLIQD--DKLVHDTFHIMPNTGWLSLK-QPMDRETRDKFLLKIAACDNG 93 (184)
Q Consensus 21 n~~i~Y~i~~~~~~~d~d~~~~~~~~~~~~~~--~~~~~~~F~I~~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~ 93 (184)
.|++++.+.-.. .+.|+.+.|-.+.. .+.+......|..+|.|-.. ..|-.|....|++.+ .|+.
T Consensus 52 kG~VRfWlQaek------lS~~a~~~~ifNdkei~~~~~~ki~fD~~tGiIEmime~~~~edeGTyT~Ql--qDGK 119 (142)
T 2jtd_A 52 KGQVRFWMQAEK------LSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQI--QDGK 119 (142)
T ss_dssp TTEEEEEEECSC------CTTCCEEEEEETTEECCSSSSCCEEECSSSCCEEEEECCCCTTTCCEEEEEE--EETT
T ss_pred cCcEEEEEEhhh------cCCCceEEEEeccceeccCCCeeEeecccCChhhhhHhhcccccCceEEEEE--ecCc
Confidence 556777765443 24556666655433 22234567778899998876 678888888887655 5664
No 63
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=56.27 E-value=26 Score=21.42 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=21.8
Q ss_pred cccccEEEEEEEEEeCCCCcccceEEEEEEEe
Q psy8617 77 RETRDKFLLKIAACDNGTPVSTAYATVAINVL 108 (184)
Q Consensus 77 ~E~~~~~~l~v~a~d~~~p~~~~~~~v~I~v~ 108 (184)
|.....|.+.+.++|..+ .+.+..+.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 556678999999999876 345556666654
No 64
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=48.04 E-value=1e+02 Score=26.47 Aligned_cols=66 Identities=17% Similarity=0.272 Sum_probs=36.8
Q ss_pred cceEEEEEeeCCcccccceEEeCcccEEEECCCCCcccccEEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCC
Q psy8617 42 NARITYKLIQDDKLVHDTFHIMPNTGWLSLKQPMDRETRDKFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSK 119 (184)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~F~I~~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~ 119 (184)
+-.+.|+|..-+. .|-.+......++-.. | ....|.|.|+|.+..+.-....+.+.|.|. ||..+.
T Consensus 688 ~~~y~Y~L~G~d~---~W~~~~~~~~~~~ytn-L---~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~-----Pp~~~~ 753 (758)
T 3ott_A 688 KNKFVYRLEGMDK---EWNFLKSNINRITYSN-L---SYGNYQLIISKLERDGQPSNRPHILNIRIL-----PPWLEH 753 (758)
T ss_dssp CCCEEEEEETTCS---SCEECCTTCCEEEECS-C---CSEEEEEEEEEBCTTSCBCSSCEEEEEEEC-----CGGGGG
T ss_pred cCeEEEEecCCCC---CccCCCCCcceEEecC-C---CCccEEEEEEEeCCCCCccCccEEEEEEEC-----Ccchhh
Confidence 3456777754222 4544433333343222 2 246799999999876533334556777764 666554
No 65
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=46.44 E-value=55 Score=20.85 Aligned_cols=29 Identities=17% Similarity=0.223 Sum_probs=21.0
Q ss_pred ccEEEEEEEEEeCCCCcccceEEEEEEEec
Q psy8617 80 RDKFLLKIAACDNGTPVSTAYATVAINVLD 109 (184)
Q Consensus 80 ~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d 109 (184)
...|.|.++|+|..+.. .....|.|.|.+
T Consensus 60 ~G~htl~a~AtD~~G~~-~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAA-STPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCB-CCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCE-EeeeEEEEEECc
Confidence 46799999999987743 334567777764
No 66
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=36.24 E-value=1.5e+02 Score=22.89 Aligned_cols=77 Identities=17% Similarity=0.190 Sum_probs=44.6
Q ss_pred cccccEEEEEEEEEeC-CCCcccceEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEE
Q psy8617 77 RETRDKFLLKIAACDN-GTPVSTAYATVAINVLDANDNDPKFSKQDYEFSIEENLPRGTVVGSVKATDEDLASNAALRYS 155 (184)
Q Consensus 77 ~E~~~~~~l~v~a~d~-~~p~~~~~~~v~I~v~d~Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~n~~i~y~ 155 (184)
+|....|.+.+ ... ++..+......+|+|.| ||++|.|.-..-.+.|.|+. |.....|.-...-.+ .-.+.|+
T Consensus 87 ~E~dEtF~v~L--s~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~~g-~vtV~~~ 160 (298)
T 3rb5_A 87 FEEDECFYIRL--FNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGARG-TVIVPYW 160 (298)
T ss_dssp CCCCEEEEEEE--ECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCCCS-CEEEEEE
T ss_pred ccCcEEEEEEE--eCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecCCC-CEEEEEE
Confidence 45555565554 333 22223333456677777 47788775554467888985 666666666543222 3467777
Q ss_pred EecC
Q psy8617 156 LIPS 159 (184)
Q Consensus 156 i~~~ 159 (184)
...+
T Consensus 161 T~dG 164 (298)
T 3rb5_A 161 TEND 164 (298)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 6655
No 67
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=34.67 E-value=1.5e+02 Score=22.41 Aligned_cols=56 Identities=21% Similarity=0.363 Sum_probs=36.7
Q ss_pred ccccceEEeCcccEEEECCCCCcccccEEEEEEEEEeC---CCCcccceEEEEEEEe--cCCC
Q psy8617 55 LVHDTFHIMPNTGWLSLKQPMDRETRDKFLLKIAACDN---GTPVSTAYATVAINVL--DAND 112 (184)
Q Consensus 55 ~~~~~F~I~~~tG~i~~~~~lD~E~~~~~~l~v~a~d~---~~p~~~~~~~v~I~v~--d~Nd 112 (184)
...+|..-|+.++.+.= -+++.. ...|.+.|.|++. |....++...+.|.|. |.|+
T Consensus 44 ~LPsWL~fd~~t~TfsG-~P~~~D-~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 44 ALPSWLHWDPHSHILEG-LPLDTD-KGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp SCCTTEEEETTTTEEEE-CCCGGG-CEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred CCCcceEEcCCCCeEEe-ccCCCC-cceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 34689999999996643 344333 4569999999854 3323445566778888 6655
No 68
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=32.35 E-value=59 Score=21.13 Aligned_cols=25 Identities=20% Similarity=0.616 Sum_probs=20.0
Q ss_pred ceEEEEEeeCCcccccceEEeCcccEEE
Q psy8617 43 ARITYKLIQDDKLVHDTFHIMPNTGWLS 70 (184)
Q Consensus 43 ~~~~~~~~~~~~~~~~~F~I~~~tG~i~ 70 (184)
..+.|++...++ ..|.++|..|.|.
T Consensus 29 ~~vaFKVKtT~p---~~y~VrP~~G~I~ 53 (109)
T 1row_A 29 EKIVFKIKSSNN---NEYRIAPVFGFVD 53 (109)
T ss_dssp SCEEEEEEESCS---SSEEEECSEEEEC
T ss_pred CeEEEEEEeCCC---CceEEcCCceEEC
Confidence 467888887655 6999999999874
No 69
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=30.40 E-value=57 Score=19.49 Aligned_cols=18 Identities=6% Similarity=-0.029 Sum_probs=14.7
Q ss_pred CcEEEEcCccEEEEcccc
Q psy8617 161 TSFQINPFSGKKSILYLH 178 (184)
Q Consensus 161 ~~F~Id~~tG~i~~~~~~ 178 (184)
..|.-|+.+++|.+.+-+
T Consensus 41 KIykyde~tNeI~LkKE~ 58 (72)
T 3kvp_A 41 KIYEYNESRNEVKLKKEY 58 (72)
T ss_dssp EEEEEETTTTEEEEEEEE
T ss_pred EEEEeCCCCCeEEEEEee
Confidence 568889999999988743
No 70
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=28.83 E-value=76 Score=20.93 Aligned_cols=26 Identities=15% Similarity=0.580 Sum_probs=20.5
Q ss_pred ceEEEEEeeCCcccccceEEeCcccEEEE
Q psy8617 43 ARITYKLIQDDKLVHDTFHIMPNTGWLSL 71 (184)
Q Consensus 43 ~~~~~~~~~~~~~~~~~F~I~~~tG~i~~ 71 (184)
..+.|++...++ ..|+|+|..|.|.-
T Consensus 37 ~~vAFKVKtT~p---~~YrVrP~~G~I~P 62 (116)
T 1m1s_A 37 SRLAFKVKSSNN---EHYRVRPVYGFVDA 62 (116)
T ss_dssp SEEEEEEEESCT---TTEEEECSEEEECT
T ss_pred CeEEEEEEecCC---CceEEcCCceEECC
Confidence 468888887655 69999999998843
No 71
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=24.34 E-value=1.1e+02 Score=20.81 Aligned_cols=24 Identities=25% Similarity=0.533 Sum_probs=11.5
Q ss_pred eEEEEEEEEeCCCCCCcEEEEEEecCC
Q psy8617 6 FQILQVTAVDLDTGNNARITYKLIQDD 32 (184)
Q Consensus 6 t~v~~v~A~D~D~g~n~~i~Y~i~~~~ 32 (184)
...-++.+.|.+ +-.++|++++++
T Consensus 66 ~~kErl~~~D~~---~~~~~y~iieG~ 89 (159)
T 1e09_A 66 YVKHKIDSIDKE---NYSYSYTLIEGD 89 (159)
T ss_dssp EEEEEEEEEETT---TTEEEEEECCCT
T ss_pred EEEEEEEEEcCC---CCEEEEEEEecc
Confidence 334444555443 444555555543
No 72
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=23.19 E-value=1.5e+02 Score=21.38 Aligned_cols=27 Identities=7% Similarity=0.333 Sum_probs=15.4
Q ss_pred CCCeEEEEEEEEeCCCCCCcEEEEEEecCC
Q psy8617 3 PCLFQILQVTAVDLDTGNNARITYKLIQDD 32 (184)
Q Consensus 3 p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~ 32 (184)
|.++..-++.+.|.+ +-.++|+|.++.
T Consensus 92 P~~~i~ErL~~lDde---~~~~sY~Iieg~ 118 (189)
T 3oji_A 92 PASTSVEILEVLDEE---KRILSFRVLGGE 118 (189)
T ss_dssp SBSEEEEEEEEEETT---TTEEEEEEEECS
T ss_pred cCceEEEEEEEEecc---CCEEEEEEEecC
Confidence 345556666666655 445666666543
No 73
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=22.84 E-value=2e+02 Score=19.99 Aligned_cols=17 Identities=0% Similarity=-0.029 Sum_probs=10.0
Q ss_pred ceEEEEEEEecCCCCCC
Q psy8617 99 AYATVAINVLDANDNDP 115 (184)
Q Consensus 99 ~~~~v~I~v~d~Nd~~P 115 (184)
+.+.+++...-.++..|
T Consensus 118 s~vkwt~~y~~~~~~~~ 134 (165)
T 3ie5_A 118 SKGKITVTYHPKPGCTV 134 (165)
T ss_dssp EEEEEEEEEEECTTCCC
T ss_pred eEEEEEEEEEECCCCCC
Confidence 34566666666666543
No 74
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=22.48 E-value=97 Score=20.49 Aligned_cols=25 Identities=20% Similarity=0.379 Sum_probs=19.8
Q ss_pred ceEEEEEeeCCcccccceEEeCcccEEE
Q psy8617 43 ARITYKLIQDDKLVHDTFHIMPNTGWLS 70 (184)
Q Consensus 43 ~~~~~~~~~~~~~~~~~F~I~~~tG~i~ 70 (184)
..+.|++.+.+. ..|.+.|..|.|.
T Consensus 39 ~~vaFKVKTT~p---~~y~VrP~~Gii~ 63 (126)
T 1msp_A 39 RRIGWAIKTTNM---RRLSVDPPCGVLD 63 (126)
T ss_dssp SCEEEEEEESCT---TTEEEESCEEEEC
T ss_pred CeEEEEEEcCCC---CcEEEECCCeEEC
Confidence 468888887655 5899999999874
No 75
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=22.27 E-value=1.5e+02 Score=21.58 Aligned_cols=27 Identities=11% Similarity=0.155 Sum_probs=14.9
Q ss_pred CCCeEEEEEEEEeCCCCCCcEEEEEEecCC
Q psy8617 3 PCLFQILQVTAVDLDTGNNARITYKLIQDD 32 (184)
Q Consensus 3 p~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~ 32 (184)
|.++..-++.+.|.+ +-.++|+|.++.
T Consensus 112 p~~~vkErL~~lDde---~~~~sYsIieG~ 138 (208)
T 3jrs_A 112 PANTSRERLDLLDDD---RRVTGFSITGGE 138 (208)
T ss_dssp SCCEEEEEEEEEETT---TTEEEEEEEESS
T ss_pred ccceEEEEEEEEecc---CCEEEEEEeeCC
Confidence 334555566666655 445666666543
No 76
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=21.80 E-value=3.8e+02 Score=23.01 Aligned_cols=35 Identities=11% Similarity=0.162 Sum_probs=22.0
Q ss_pred ccEEEEEEEEEeCCCCcccceEEEEEEEecCCCCCCccCC
Q psy8617 80 RDKFLLKIAACDNGTPVSTAYATVAINVLDANDNDPKFSK 119 (184)
Q Consensus 80 ~~~~~l~v~a~d~~~p~~~~~~~v~I~v~d~Nd~~P~f~~ 119 (184)
...|.|.|+|.+..+.-....+.+.|.|. ||.+..
T Consensus 753 pG~Y~f~V~a~n~~g~w~~~~~~l~i~I~-----Ppww~t 787 (795)
T 4a2l_A 753 QGTYQFLVKAANSDGKWNPIPTALEIIVL-----PIWYKT 787 (795)
T ss_dssp SEEEEEEEEEECTTSCBCSSCEEEEEEEC-----CCC---
T ss_pred CCeEEEEEEEECCCCccCCCceEEEEEEE-----CCcccC
Confidence 45799999999876532234566777763 666643
Done!