Query psy8618
Match_columns 232
No_of_seqs 201 out of 1431
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 23:25:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8618.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8618hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a62_A Cadherin-8; extracellul 100.0 1.7E-49 5.8E-54 324.3 18.4 225 1-232 56-304 (322)
2 3ubf_A Neural-cadherin; cell a 100.0 1.6E-44 5.6E-49 294.9 26.3 219 1-228 51-297 (316)
3 3q2w_A Cadherin-2; cell adhesi 100.0 8.8E-45 3E-49 317.0 23.5 226 1-228 59-309 (559)
4 3q2v_A Cadherin-1; cell adhesi 100.0 6.2E-44 2.1E-48 311.1 27.7 226 1-229 59-307 (550)
5 1l3w_A EP-cadherin, C-cadherin 100.0 1.2E-44 4.1E-49 315.2 23.0 226 1-229 65-313 (546)
6 3q2v_A Cadherin-1; cell adhesi 100.0 1.2E-42 4.2E-47 302.9 28.5 222 2-232 172-421 (550)
7 1q55_A EP-cadherin, C-cadherin 100.0 3E-43 1E-47 319.9 23.0 226 1-229 214-462 (880)
8 3q2w_A Cadherin-2; cell adhesi 100.0 2.2E-42 7.5E-47 301.9 27.0 223 2-232 171-426 (559)
9 1l3w_A EP-cadherin, C-cadherin 100.0 7.4E-43 2.5E-47 303.9 23.0 222 2-232 178-426 (546)
10 3ubh_A Neural-cadherin; cell a 100.0 7.3E-42 2.5E-46 289.1 26.4 217 2-232 168-406 (419)
11 3ubh_A Neural-cadherin; cell a 100.0 2.9E-41 1E-45 285.4 27.7 219 2-229 57-302 (419)
12 1q55_A EP-cadherin, C-cadherin 100.0 3.2E-41 1.1E-45 306.6 23.0 222 2-232 327-575 (880)
13 2a4e_A Cadherin-11; dimer, cal 100.0 1.9E-36 6.6E-41 233.7 20.4 152 1-158 57-215 (215)
14 3mvs_A Cadherin-23, otocadheri 100.0 1.3E-36 4.4E-41 234.3 19.2 172 45-229 3-189 (210)
15 2x2u_A Proto-oncogene tyrosine 100.0 2.7E-37 9.1E-42 243.3 7.7 154 2-160 67-245 (246)
16 2a4e_A Cadherin-11; dimer, cal 100.0 1E-34 3.6E-39 224.0 20.5 168 55-230 5-192 (215)
17 2qvi_A Cadherin-2; beta barrel 100.0 5.6E-35 1.9E-39 225.7 16.7 173 57-230 6-198 (215)
18 3mvs_A Cadherin-23, otocadheri 100.0 6.5E-34 2.2E-38 219.2 21.1 146 2-156 64-210 (210)
19 3qrb_A Cadherin-1; cell adhesi 100.0 2.3E-34 7.8E-39 222.3 17.9 173 57-232 6-201 (213)
20 3ppe_A Vascular endothelial ca 100.0 2E-33 7E-38 215.2 20.7 165 56-231 5-190 (203)
21 3qrb_A Cadherin-1; cell adhesi 100.0 9.8E-34 3.3E-38 218.8 18.9 149 2-151 60-213 (213)
22 2x2u_A Proto-oncogene tyrosine 100.0 1.4E-35 4.9E-40 233.5 8.5 176 49-231 2-223 (246)
23 2qvi_A Cadherin-2; beta barrel 100.0 8.5E-34 2.9E-38 219.1 16.9 150 1-151 59-215 (215)
24 3k5r_A Cadherin 13; mouse, str 100.0 1.8E-33 6.3E-38 218.0 17.1 171 57-231 7-205 (218)
25 3k5r_A Cadherin 13; mouse, str 100.0 3E-33 1E-37 216.8 18.1 150 1-151 59-218 (218)
26 3lnd_A CDH6 protein, cadherin 100.0 2.5E-34 8.5E-39 221.1 11.7 166 57-230 6-191 (207)
27 3ppe_A Vascular endothelial ca 100.0 9.3E-33 3.2E-37 211.5 20.1 143 2-151 55-203 (203)
28 3lnd_A CDH6 protein, cadherin 100.0 1.3E-32 4.5E-37 211.5 14.1 145 1-151 56-207 (207)
29 2yst_A Protocadherin-7; BH-PCD 100.0 8.8E-32 3E-36 189.0 9.5 118 38-157 2-119 (119)
30 2a62_A Cadherin-8; extracellul 100.0 3.9E-31 1.3E-35 215.8 13.5 167 57-231 6-192 (322)
31 3ubf_A Neural-cadherin; cell a 100.0 1.2E-29 3.9E-34 207.1 19.2 145 2-156 163-316 (316)
32 4apx_B Protocadherin-15, otoca 100.0 1.8E-29 6E-34 197.7 17.8 173 55-231 21-221 (242)
33 2ee0_A Protocadherin-9; Ca dom 100.0 2.3E-29 7.8E-34 175.2 9.3 113 38-153 2-114 (114)
34 4apx_B Protocadherin-15, otoca 100.0 1.1E-27 3.8E-32 187.5 14.9 146 5-151 80-237 (242)
35 2yqg_A Desmoglein-2, HDGC; cad 99.9 1.6E-25 5.4E-30 157.7 5.7 117 43-161 5-122 (123)
36 1ncg_A N-cadherin; cell adhesi 99.9 2.5E-23 8.5E-28 143.6 9.5 102 55-159 6-110 (110)
37 1wyj_A Protocadherin beta 14; 99.8 2.2E-22 7.7E-27 141.6 1.5 105 55-167 12-123 (125)
38 1zvn_A Mn-cadherin; strand dim 99.8 4.7E-20 1.6E-24 124.3 11.3 91 56-151 6-99 (99)
39 1zxk_A Cadherin-8; strand dime 99.8 5.4E-20 1.8E-24 123.9 10.6 91 56-151 5-98 (98)
40 3k6d_A T-cadherin; cell adhesi 99.8 3.2E-19 1.1E-23 120.4 9.9 91 57-151 6-99 (99)
41 3k6f_A T-cadherin; cell adhesi 99.8 1.1E-18 3.7E-23 118.1 10.6 91 57-151 7-100 (100)
42 3k6i_A T-cadherin; cell adhesi 99.8 1.9E-18 6.4E-23 116.7 11.3 91 57-151 6-99 (99)
43 2omz_B Epithelial-cadherin; le 99.8 1.5E-18 5.1E-23 118.4 9.4 93 57-152 10-105 (105)
44 2ee0_A Protocadherin-9; Ca dom 99.8 1E-19 3.5E-24 126.2 3.6 85 147-231 2-101 (114)
45 2yst_A Protocadherin-7; BH-PCD 99.8 3.1E-19 1.1E-23 124.9 4.0 85 147-231 2-100 (119)
46 1wuz_A Pcdha4 protein, CNR-EC1 99.6 8.3E-17 2.8E-21 109.3 1.9 94 55-155 4-103 (103)
47 1zvn_A Mn-cadherin; strand dim 99.5 1.1E-13 3.6E-18 93.1 7.6 66 163-231 20-86 (99)
48 1zxk_A Cadherin-8; strand dime 99.5 1.2E-13 4E-18 92.7 7.8 64 163-229 19-82 (98)
49 2yqg_A Desmoglein-2, HDGC; cad 99.4 1.6E-13 5.5E-18 96.1 5.8 52 1-52 71-122 (123)
50 1ncg_A N-cadherin; cell adhesi 99.4 1.7E-13 5.8E-18 94.1 5.1 50 1-50 61-110 (110)
51 3k6i_A T-cadherin; cell adhesi 99.3 3.1E-12 1.1E-16 86.0 7.4 66 162-231 18-86 (99)
52 2omz_B Epithelial-cadherin; le 99.3 1.8E-12 6.2E-17 88.1 6.1 66 164-232 24-92 (105)
53 3k6f_A T-cadherin; cell adhesi 99.3 3.1E-12 1.1E-16 86.2 6.2 66 162-231 19-87 (100)
54 3k6d_A T-cadherin; cell adhesi 99.3 3.9E-12 1.3E-16 85.5 6.0 66 162-231 18-86 (99)
55 1wyj_A Protocadherin beta 14; 99.1 3E-11 1E-15 84.6 1.8 53 2-58 66-122 (125)
56 1wuz_A Pcdha4 protein, CNR-EC1 98.2 1.7E-06 5.7E-11 58.2 4.1 58 165-224 19-84 (103)
57 3pdd_A Glycoside hydrolase, fa 95.0 0.71 2.4E-05 34.0 15.8 116 13-151 60-180 (190)
58 1op4_A Neural-cadherin; beta s 92.8 1.2 4E-05 31.8 9.2 79 46-135 32-110 (159)
59 3rb5_A Na/Ca exchange protein; 91.5 4.3 0.00015 32.1 12.5 117 44-170 6-136 (298)
60 2yhg_A SDE_182CT, cellulose-bi 89.2 8.5 0.00029 32.1 12.3 70 76-149 365-436 (437)
61 3ead_A Na/Ca exchange protein; 88.9 4.2 0.00014 28.0 10.3 46 46-95 3-48 (137)
62 3gin_A Sodium/calcium exchange 85.5 7.7 0.00026 27.5 8.9 58 34-95 10-67 (160)
63 2yrl_A KIAA1837 protein; PKD d 85.4 2.3 8E-05 27.7 5.7 32 12-45 67-98 (102)
64 2kpn_A Bacillolysin; solution 84.2 5.1 0.00017 26.2 6.8 45 2-48 47-91 (103)
65 3pdd_A Glycoside hydrolase, fa 76.3 20 0.00067 26.1 12.6 96 121-229 59-166 (190)
66 2yrl_A KIAA1837 protein; PKD d 75.5 9.5 0.00032 24.7 6.0 32 121-154 67-98 (102)
67 1u2c_A Dystroglycan; IG-like d 74.8 17 0.00059 27.6 7.9 56 97-154 44-104 (246)
68 3rb5_A Na/Ca exchange protein; 73.6 31 0.0011 27.1 13.2 79 10-94 87-165 (298)
69 2kpn_A Bacillolysin; solution 72.3 9.8 0.00034 24.8 5.4 45 111-157 47-91 (103)
70 2y72_A Collagenase, collagenas 72.0 12 0.0004 23.2 5.6 30 10-41 55-84 (85)
71 3us9_A Sodium/calcium exchange 69.5 39 0.0013 26.5 16.6 37 57-95 18-54 (295)
72 2y72_A Collagenase, collagenas 62.9 18 0.00062 22.3 5.1 30 119-150 55-84 (85)
73 1op4_A Neural-cadherin; beta s 62.4 28 0.00097 24.6 6.5 48 174-227 62-109 (159)
74 3us9_A Sodium/calcium exchange 56.1 71 0.0024 25.0 14.2 56 34-94 128-183 (295)
75 2yhg_A SDE_182CT, cellulose-bi 46.6 66 0.0022 26.8 7.1 63 165-231 356-425 (437)
76 3ott_A Two-component system se 46.5 93 0.0032 27.5 8.8 74 69-150 674-747 (758)
77 4a2l_A BT_4663, two-component 46.3 1.6E+02 0.0054 26.2 10.6 79 69-161 709-787 (795)
78 3klq_A Putative pilus anchorin 24.6 1.7E+02 0.006 20.0 7.1 12 217-228 83-94 (141)
79 3v9f_A Two-component system se 23.4 3.5E+02 0.012 23.8 8.6 71 71-150 705-775 (781)
80 2c4x_A Endoglucanase, ctcel9D- 23.2 2.5E+02 0.0086 21.4 9.6 33 118-152 64-96 (260)
81 2lv4_A Putative outer membrane 22.3 37 0.0013 22.9 1.4 31 17-47 49-79 (146)
82 2c4x_A Endoglucanase, ctcel9D- 20.8 1.8E+02 0.0061 22.3 5.3 33 9-43 64-96 (260)
No 1
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1.7e-49 Score=324.32 Aligned_cols=225 Identities=34% Similarity=0.501 Sum_probs=202.0
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCC-CCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGS-PPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKD 79 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~-~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D 79 (232)
.|.+.++||||.+..|.|+|.|+|+++ +++++.+.|+|.|.|+|||+|.|... .|.+.|+|+.++|+.++++.|+|+|
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~v~E~~~~gt~v~~v~A~D~D 134 (322)
T 2a62_A 56 DIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNG-PYHATVPEMSILGTSVTNVTATDAD 134 (322)
T ss_dssp EEEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSS-EEEEEECSSCCTTCBCCCCCCCBCS
T ss_pred EEEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCC-ceEEEEeCCCCCCCEEEEEEEEeCC
Confidence 378899999999999999999999875 45788899999999999999999987 7899999999999999999999999
Q ss_pred C---CCCcEEEEEEeeCCCCCCcccEEEeCCceEEEEC-ccCCccCCCEEEEEEEEEeCCCCC--cceeEEEEEEEEecC
Q psy8618 80 D---GSNATISYSILKGRDTDGYGVFTIDPISGVIRTK-SVLDHEDRSIYRIAVAATDNGFPS--RQTVRLLRVEVLDLN 153 (232)
Q Consensus 80 ~---~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~-~~ld~e~~~~~~l~v~a~d~~~~~--~~~~~~v~i~v~d~N 153 (232)
. |.|+.++|+|.++ ..+|.|++.+|.|++. +.||||....|.|.|.|+|+|.|+ +++.+.|+|+|.|+|
T Consensus 135 ~~~~G~n~~i~Y~i~~~-----~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvN 209 (322)
T 2a62_A 135 DPVYGNSAKLVYSILEG-----QPYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVN 209 (322)
T ss_dssp CSSSTTSSCEEEEEEEC-----TTTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCC
T ss_pred CCCCCccEEEEEEEccC-----CCCEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecC
Confidence 6 7788999999875 2579999999999998 899999999999999999998874 889999999999999
Q ss_pred CCCCeeeCCceEE-------------EEEeecCCCCCCeEEEEEEccCCCCCCcEEEE----CCceEEEEeecCCCcccc
Q psy8618 154 DNRPTFTSSSLLF-------------KVSASDPDCGVNAMVNYTLGESPSRTNHFYMK----SVSGEICISQDLDFESRS 216 (232)
Q Consensus 154 d~~P~f~~~~~~~-------------~v~~~D~d~~~~~~i~y~l~~~~~~~~~f~i~----~~~G~i~~~~~ld~e~~~ 216 (232)
||+|.|....|.+ +|.++|+|.+.++.++|+|..+ +..+.|.|+ +.+|.|++.++||||...
T Consensus 210 Dn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g-~~~~~F~I~~d~~~~tG~i~~~~~LD~E~~~ 288 (322)
T 2a62_A 210 DNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDG-DGTALFEITSDAQAQDGVIRLRKPLDFETKK 288 (322)
T ss_dssp CCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC----CCSSBCCBCCTTTSEEEEEBCSCCCCSSCC
T ss_pred CCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECC-CCCCcEEEeccCCCceEEEEECCcCCcccCC
Confidence 9999999887755 4556888988888999999876 567899998 468999999999999999
Q ss_pred EEEEEEEEEECCccCC
Q psy8618 217 SYEFPVVATDRGKETQ 232 (232)
Q Consensus 217 ~y~l~V~a~D~g~~~q 232 (232)
.|.|.|+|+|+|.|++
T Consensus 289 ~y~l~V~A~D~g~pp~ 304 (322)
T 2a62_A 289 SYTLKVEAANIHIDPR 304 (322)
T ss_dssp EEEEEEEEECCCSSCT
T ss_pred eEEEEEEEEECCCCCc
Confidence 9999999999998864
No 2
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.6e-44 Score=294.90 Aligned_cols=219 Identities=25% Similarity=0.329 Sum_probs=186.3
Q ss_pred CeEecCCCCcCCC-----CeEEEEEEEEeCCCC-CceeEEEEEEEEEeCCCCCCeecCCCc-eEEEEecCCCCCcEEEEE
Q psy8618 1 EISTREPLDREAR-----SSHELVAEARDQGSP-PRSSRVAVKISVTDVNDNAPELVDPQE-DVISVREEQPPGTEVVRA 73 (232)
Q Consensus 1 ~i~~~~~lD~E~~-----~~~~l~v~a~d~~~~-~~~~~~~v~v~V~dvNd~~P~f~~~~~-~~~~v~E~~~~g~~v~~v 73 (232)
.|.+.++||||.. ..|.|+|.|.|++.| ++++.+.|+|.|.|+|||+|.|..... |.+.|+|+.++|+.++++
T Consensus 51 ~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v 130 (316)
T 3ubf_A 51 AVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTL 130 (316)
T ss_dssp EEEESSCCCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEEC
T ss_pred EEEECCccChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEE
Confidence 3788999999984 578899999998866 578999999999999999999998732 789999999999999999
Q ss_pred EEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeCCC----CCcceeEEEEEEE
Q psy8618 74 RAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDNGF----PSRQTVRLLRVEV 149 (232)
Q Consensus 74 ~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~----~~~~~~~~v~i~v 149 (232)
.|+|+|.+.+ ++|+|..+ +..++|.|++.+|.|++.++||||....|.|.|.|+|++. +++++++.|.|+|
T Consensus 131 ~A~D~D~g~n--i~Y~i~~~---~~~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V 205 (316)
T 3ubf_A 131 QARDPDTDHN--IHYFIVRD---RTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSI 205 (316)
T ss_dssp CEECSSTTCC--EEEEEEEE---ESSSCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEE
T ss_pred EEECCCCCCc--eEEEEEeC---CCCCEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEE
Confidence 9999998877 99999876 5667999999999999999999999999999999999874 4577888899999
Q ss_pred EecCCCCCeeeCCceEEEEEe-------------ecCCCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCccc-
Q psy8618 150 LDLNDNRPTFTSSSLLFKVSA-------------SDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESR- 215 (232)
Q Consensus 150 ~d~Nd~~P~f~~~~~~~~v~~-------------~D~d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~- 215 (232)
.| |||+|.|....|.+.|.| +|+| ++.++|+|....+..+.|.|++.+|.|++.++||||..
T Consensus 206 ~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~ 281 (316)
T 3ubf_A 206 VG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLR 281 (316)
T ss_dssp EE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSCTTTEEECTTTCEEEECSCCCSSCTT
T ss_pred Ec-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCeEEEECCeEEEEECCcCCccccC
Confidence 99 999999999998877776 4444 45679999732267899999999999999999999997
Q ss_pred --cEEEEEEEEE-ECC
Q psy8618 216 --SSYEFPVVAT-DRG 228 (232)
Q Consensus 216 --~~y~l~V~a~-D~g 228 (232)
..|.|.|.|+ |+|
T Consensus 282 ~~~~y~l~V~A~dd~g 297 (316)
T 3ubf_A 282 QPHVYSLIVTATEDSG 297 (316)
T ss_dssp SCSEEEEEEEEEESSS
T ss_pred CCceEEEEEEEEECCC
Confidence 7999999999 455
No 3
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=8.8e-45 Score=316.97 Aligned_cols=226 Identities=30% Similarity=0.391 Sum_probs=201.7
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDD 80 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 80 (232)
+|.+.++||||++..|.|++.|+|++++..++.+.|+|.|.|+|||+|.|... .|.+.|+|++++|+.++++.|+|+|.
T Consensus 59 ~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~V~En~~~Gt~v~~v~A~D~D~ 137 (559)
T 3q2w_A 59 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQ-VWNGSVPEGSKPGTYVMTVTAIDADD 137 (559)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCS-EEEEEEETTCCTTCEEEECCEECSSC
T ss_pred EEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCC-eeEEEEeCCCCCCcEEEEEEEEcCCC
Confidence 37889999999999999999999999988899999999999999999999987 78999999999999999999999998
Q ss_pred C--CCcEEEEEEeeCCCCC-CcccEEEeCCceEEEECc-cCCccCCCEEEEEEEEEeCCC---CCcceeEEEEEEEEecC
Q psy8618 81 G--SNATISYSILKGRDTD-GYGVFTIDPISGVIRTKS-VLDHEDRSIYRIAVAATDNGF---PSRQTVRLLRVEVLDLN 153 (232)
Q Consensus 81 ~--~~~~v~y~i~~~~~~~-~~~~f~id~~tG~i~~~~-~ld~e~~~~~~l~v~a~d~~~---~~~~~~~~v~i~v~d~N 153 (232)
+ .|+.++|+|.++.+.. ..++|.|++.+|.|++.+ .||||....|.|.|.|+|++. ++++++++|.|+|.|+|
T Consensus 138 g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvN 217 (559)
T 3q2w_A 138 PNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVN 217 (559)
T ss_dssp TTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCS
T ss_pred CCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCC
Confidence 7 5889999998764321 237899999999999987 999999999999999999854 35889999999999999
Q ss_pred CCCCeeeCCceEEEE------------EeecCCCCC--CeEEEEEEccCCCCCCcEEE----ECCceEEEEeecCCCccc
Q psy8618 154 DNRPTFTSSSLLFKV------------SASDPDCGV--NAMVNYTLGESPSRTNHFYM----KSVSGEICISQDLDFESR 215 (232)
Q Consensus 154 d~~P~f~~~~~~~~v------------~~~D~d~~~--~~~i~y~l~~~~~~~~~f~i----~~~~G~i~~~~~ld~e~~ 215 (232)
||+|.|....|.+.| .++|+|.+. ++.++|+|..+ +..+.|.| ++.+|.|++.++||||..
T Consensus 218 Dn~P~f~~~~y~~~V~En~~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g-~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~ 296 (559)
T 3q2w_A 218 DNPPEFTAMTFYGEVPENRVDVIVANLTVTDKDQPHTPAWNAAYRISGG-DPTGRFAILTDPNSNDGLVTVVKPIDFETN 296 (559)
T ss_dssp CSCCEESSSEEEEEEESSCSSEEEEEEEEECCSCTTSTTTSBCCEEEES-CTTCCEEEEECTTTCEEEEEECSCCCTTTC
T ss_pred CCCCccccccceeEecCCCCCcEEEEEEEEcCCCCCCCceeEEEEEecC-CCCCceEEEecCCCCcEEEEeCCCCCCccC
Confidence 999999988876654 457888765 45789999876 66789999 478999999999999999
Q ss_pred cEEEEEEEEEECC
Q psy8618 216 SSYEFPVVATDRG 228 (232)
Q Consensus 216 ~~y~l~V~a~D~g 228 (232)
..|.|.|.|+|+|
T Consensus 297 ~~y~l~V~A~D~~ 309 (559)
T 3q2w_A 297 RMFVLTVAAENQV 309 (559)
T ss_dssp SEEEEEEECCBSS
T ss_pred ceEEEEEEEEcCC
Confidence 9999999999975
No 4
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=6.2e-44 Score=311.07 Aligned_cols=226 Identities=30% Similarity=0.392 Sum_probs=204.3
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDD 80 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 80 (232)
.|.+.++||||+...|.|++.|+|+++++.++.+.|+|.|.|+|||+|.|... .|.+.|+|++++|+.++++.|+|+|.
T Consensus 59 ~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~V~E~~~~Gt~v~~v~A~D~D~ 137 (550)
T 3q2v_A 59 WLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQE-VFEGSVAEGAVPGTSVMKVSATDADD 137 (550)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCS-EEEEEEETTCCTTCEEEECCBCCCSC
T ss_pred EEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCC-ceEEEEeCCCCCCCEEEEEEEEeCCC
Confidence 37889999999999999999999998888888899999999999999999987 78999999999999999999999999
Q ss_pred C---CCcEEEEEEeeCCCC-CCcccEEEeCCceEEEE-CccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEEEEecCCC
Q psy8618 81 G---SNATISYSILKGRDT-DGYGVFTIDPISGVIRT-KSVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVLDLNDN 155 (232)
Q Consensus 81 ~---~~~~v~y~i~~~~~~-~~~~~f~id~~tG~i~~-~~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~ 155 (232)
+ .|+.++|+|.++.+. ...++|.|++.+|.|++ .+.||||....|.|.|.|+|+|.+++++++.|.|+|.|+|||
T Consensus 138 g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn 217 (550)
T 3q2v_A 138 DVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDN 217 (550)
T ss_dssp TTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCS
T ss_pred CCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCC
Confidence 8 689999999877532 24578999999999987 578999999999999999999888999999999999999999
Q ss_pred CCeeeCCceEEEEEe------------ecCCCCCCe--EEEEEEccCCCCCCcEEEE----CCceEEEEeecCCCccccE
Q psy8618 156 RPTFTSSSLLFKVSA------------SDPDCGVNA--MVNYTLGESPSRTNHFYMK----SVSGEICISQDLDFESRSS 217 (232)
Q Consensus 156 ~P~f~~~~~~~~v~~------------~D~d~~~~~--~i~y~l~~~~~~~~~f~i~----~~~G~i~~~~~ld~e~~~~ 217 (232)
+|.|....|.++|.| +|+|.+.++ .+.|+|.. +..+.|.|+ +.+|.|++.++||||....
T Consensus 218 ~P~F~~~~y~~~V~En~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~--~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~ 295 (550)
T 3q2v_A 218 APVFNPSTYQGQVPENEVNARIATLKVTDDDAPNTPAWKAVYTVVN--DPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQ 295 (550)
T ss_dssp CCEESSSEEEEEEESSCSSCCCEEECEECCSCTTSTTTCEEEEESS--CSSCCEEEEECTTTCCEEEEESSCCCTTTCSE
T ss_pred CCEEecceeEEEEecCCCCCEEEEEEEEECCCCCCCcEEEEEEEEe--CCCCcEEEEecCCCccEEEEecccCCccccce
Confidence 999999888776655 677776654 45799987 678899998 7899999999999999999
Q ss_pred EEEEEEEEECCc
Q psy8618 218 YEFPVVATDRGK 229 (232)
Q Consensus 218 y~l~V~a~D~g~ 229 (232)
|.|.|.|+|+|.
T Consensus 296 y~l~V~a~D~~~ 307 (550)
T 3q2v_A 296 YILHVRVENEEP 307 (550)
T ss_dssp EEEEEEEEESSC
T ss_pred EEEEEEEEeCCC
Confidence 999999999973
No 5
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.2e-44 Score=315.22 Aligned_cols=226 Identities=30% Similarity=0.374 Sum_probs=203.7
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDD 80 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 80 (232)
+|.++++||||.+..|.|+|.|+|+++++.++.+.|+|.|.|+|||+|.|... .|.+.|+|++++|+.++++.|+|+|.
T Consensus 65 ~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~V~En~~~gt~v~~v~A~D~D~ 143 (546)
T 1l3w_A 65 WMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQD-VFRGSVREGVQPGTQVMAVSATDEDD 143 (546)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSS-CEEEEEETTCCSSEEEEECCEECCSC
T ss_pred EEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCc-eeEEEEECCCCCCCEEEEEEEEcCCC
Confidence 37889999999999999999999999888888899999999999999999987 78999999999999999999999999
Q ss_pred C---CCcEEEEEEeeCCCC-CCcccEEEeCCceEEEEC-ccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEEEEecCCC
Q psy8618 81 G---SNATISYSILKGRDT-DGYGVFTIDPISGVIRTK-SVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVLDLNDN 155 (232)
Q Consensus 81 ~---~~~~v~y~i~~~~~~-~~~~~f~id~~tG~i~~~-~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~ 155 (232)
+ .|+.++|+|.++.+. ...++|.|++.+|.|++. +.||||....|.|.|.|+|++.+++++.+.|.|+|.|+|||
T Consensus 144 g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn 223 (546)
T 1l3w_A 144 NIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDN 223 (546)
T ss_dssp CSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCC
T ss_pred CCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCC
Confidence 8 688999999876421 145799999999999985 78999999999999999999988899999999999999999
Q ss_pred CCeeeCCceEEEEE------------eecCC--CCCCeEEEEEEccCCCCCCcEEEE----CCceEEEEeecCCCccccE
Q psy8618 156 RPTFTSSSLLFKVS------------ASDPD--CGVNAMVNYTLGESPSRTNHFYMK----SVSGEICISQDLDFESRSS 217 (232)
Q Consensus 156 ~P~f~~~~~~~~v~------------~~D~d--~~~~~~i~y~l~~~~~~~~~f~i~----~~~G~i~~~~~ld~e~~~~ 217 (232)
+|.|....|.++|. ++|+| .+.++.++|+|.. +..+.|.|+ ..+|.|++.++||||....
T Consensus 224 ~P~F~~~~y~~~V~En~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~--~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~ 301 (546)
T 1l3w_A 224 APIFDPKTYTALVPENEIGFEVQRLSVTDLDMPGTPAWQAVYKIRV--NEGGFFNITTDPESNQGILTTAKGLDFELRKQ 301 (546)
T ss_dssp CCCBSCSEEEEEEESSSCCCEEEEECBCCCSCTTSTTSCEECCBSC--CTTSCEEEEECTTTCCEEEEESSCCCCSSCCC
T ss_pred CCccccccceEEEEeCCCCCEEEEEEEEeCCCCCCCCcEEEEEEEe--CCCceEEEEecCCCCeEEEEECccCCcccccE
Confidence 99999887766554 47888 5678889999986 567899996 3689999999999999999
Q ss_pred EEEEEEEEECCc
Q psy8618 218 YEFPVVATDRGK 229 (232)
Q Consensus 218 y~l~V~a~D~g~ 229 (232)
|.|.|.|+|+|.
T Consensus 302 y~l~V~a~D~~~ 313 (546)
T 1l3w_A 302 YVLQITVENAEP 313 (546)
T ss_dssp EEEEECCEESSC
T ss_pred EEEEEEEEECCC
Confidence 999999999873
No 6
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1.2e-42 Score=302.95 Aligned_cols=222 Identities=25% Similarity=0.369 Sum_probs=200.2
Q ss_pred eEe-cCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCC
Q psy8618 2 IST-REPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDD 80 (232)
Q Consensus 2 i~~-~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 80 (232)
|.+ .++||||.+..|.|+|.|+|+|++++++.+.|+|.|.|+|||+|+|... .|.+.|+|+ ++|+.++++.|+|+|.
T Consensus 172 i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~-~y~~~V~En-~~g~~v~~v~a~D~D~ 249 (550)
T 3q2v_A 172 ISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPS-TYQGQVPEN-EVNARIATLKVTDDDA 249 (550)
T ss_dssp EEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSS-EEEEEEESS-CSSCCCEEECEECCSC
T ss_pred EEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecc-eeEEEEecC-CCCCEEEEEEEEECCC
Confidence 444 5899999999999999999998888999999999999999999999987 789999999 9999999999999999
Q ss_pred CCCc--EEEEEEeeCCCCCCcccEEEe----CCceEEEECccCCccCCCEEEEEEEEEeCCC---CCcceeEEEEEEEEe
Q psy8618 81 GSNA--TISYSILKGRDTDGYGVFTID----PISGVIRTKSVLDHEDRSIYRIAVAATDNGF---PSRQTVRLLRVEVLD 151 (232)
Q Consensus 81 ~~~~--~v~y~i~~~~~~~~~~~f~id----~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~---~~~~~~~~v~i~v~d 151 (232)
+.++ .++|+|.. +..++|.|+ +.+|.|++.+.||||....|.|.|.|+|++. +.+++++.|.|+|.|
T Consensus 250 ~~n~~~~~~ysi~~----~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~D 325 (550)
T 3q2v_A 250 PNTPAWKAVYTVVN----DPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVD 325 (550)
T ss_dssp TTSTTTCEEEEESS----CSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEEC
T ss_pred CCCCcEEEEEEEEe----CCCCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEe
Confidence 8766 46799965 456789998 7899999999999999999999999999873 457889999999999
Q ss_pred cCCCCCeeeCCceEEEE-------------EeecCCCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCccc---
Q psy8618 152 LNDNRPTFTSSSLLFKV-------------SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESR--- 215 (232)
Q Consensus 152 ~Nd~~P~f~~~~~~~~v-------------~~~D~d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~--- 215 (232)
+|| +|.|....|.+.| .++|+|.+.++.++|+|.+ +....|.|++.+|.|++.+.||||..
T Consensus 326 vND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~--~~~~~f~id~~tG~i~~~~~lDrE~~~~~ 402 (550)
T 3q2v_A 326 VNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWR--DTANWLEINPETGAIFTRAEMDREDAEHV 402 (550)
T ss_dssp CCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEE--CTTCCEEECTTTCEEEECSCCCTTCTTTC
T ss_pred cCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEec--CCCCcEEEeCCCcEEEECCccCccccccc
Confidence 999 9999988776554 4589999889999999976 45789999999999999999999998
Q ss_pred --cEEEEEEEEEECCccCC
Q psy8618 216 --SSYEFPVVATDRGKETQ 232 (232)
Q Consensus 216 --~~y~l~V~a~D~g~~~q 232 (232)
..|.|.|.|+|+|.|++
T Consensus 403 ~~~~y~l~V~A~D~g~p~~ 421 (550)
T 3q2v_A 403 KNSTYVALIIATDDGSPIA 421 (550)
T ss_dssp CSSEEEEEEEEECCSSSCC
T ss_pred CCCEEEEEEEEEeCCCCcc
Confidence 89999999999999864
No 7
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=3e-43 Score=319.89 Aligned_cols=226 Identities=29% Similarity=0.372 Sum_probs=203.9
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDD 80 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 80 (232)
+|.+.++||||.+..|.|+|.|+|+++++.++.+.|+|.|.|+|||+|.|... .|.+.|+|++++|+.++++.|+|+|.
T Consensus 214 ~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~V~En~~~Gt~V~~v~AtD~D~ 292 (880)
T 1q55_A 214 WMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQD-VFRGSVREGVQPGTQVMAVSATDEDD 292 (880)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSS-CEEEEEETTCCSSEEEEECCEECCSC
T ss_pred EEEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCC-cEEEEEeCCCCCCceeEEEEEEcCCC
Confidence 37889999999999999999999999888888999999999999999999988 78999999999999999999999999
Q ss_pred C---CCcEEEEEEeeCCCC-CCcccEEEeCCceEEEEC-ccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEEEEecCCC
Q psy8618 81 G---SNATISYSILKGRDT-DGYGVFTIDPISGVIRTK-SVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVLDLNDN 155 (232)
Q Consensus 81 ~---~~~~v~y~i~~~~~~-~~~~~f~id~~tG~i~~~-~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~ 155 (232)
+ .|+.++|+|.++.+. ...++|.|++.+|.|++. +.||||....|.|.|.|+|++.++++++++|.|+|.|+|||
T Consensus 293 g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn 372 (880)
T 1q55_A 293 NIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDN 372 (880)
T ss_dssp CSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCC
T ss_pred CCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCC
Confidence 8 689999999876421 146799999999999985 78999999999999999999888899999999999999999
Q ss_pred CCeeeCCceEEEEE------------eecCC--CCCCeEEEEEEccCCCCCCcEEEE--C--CceEEEEeecCCCccccE
Q psy8618 156 RPTFTSSSLLFKVS------------ASDPD--CGVNAMVNYTLGESPSRTNHFYMK--S--VSGEICISQDLDFESRSS 217 (232)
Q Consensus 156 ~P~f~~~~~~~~v~------------~~D~d--~~~~~~i~y~l~~~~~~~~~f~i~--~--~~G~i~~~~~ld~e~~~~ 217 (232)
+|.|....|.++|. ++|+| .+.++.++|+|.. +..+.|.|+ + .+|.|++.++||||....
T Consensus 373 ~P~F~~~~y~~~V~En~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~--~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~ 450 (880)
T 1q55_A 373 APIFDPKTYTALVPENEIGFEVQRLSVTDLDMPGTPAWQAVYKIRV--NEGGFFNITTDPESNQGILTTAKGLDFELRKQ 450 (880)
T ss_dssp CCCBSCSEEEEEEESSSCCCEEEEECBCCCSCTTSTTSCEECCBSC--CTTSCEEEEECTTTCCEEEEESSCCCCSSCCC
T ss_pred CCCccccceEEEeecCCCCcEEEEEEEECCCCCCCCCceEEEEEec--CCCceEEEEecCCCceEEEecccCCCcccCCc
Confidence 99999888766555 47888 5678889999986 567899996 2 689999999999999999
Q ss_pred EEEEEEEEECCc
Q psy8618 218 YEFPVVATDRGK 229 (232)
Q Consensus 218 y~l~V~a~D~g~ 229 (232)
|.|.|.|+|+|.
T Consensus 451 y~l~V~A~D~~~ 462 (880)
T 1q55_A 451 YVLQITVENAEP 462 (880)
T ss_dssp EEEEECCEESSC
T ss_pred EEEEEEEEECCC
Confidence 999999999874
No 8
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=2.2e-42 Score=301.88 Aligned_cols=223 Identities=29% Similarity=0.372 Sum_probs=199.6
Q ss_pred eEecC-CCCcCCCCeEEEEEEEEeCCC---CCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEe
Q psy8618 2 ISTRE-PLDREARSSHELVAEARDQGS---PPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVD 77 (232)
Q Consensus 2 i~~~~-~lD~E~~~~~~l~v~a~d~~~---~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D 77 (232)
|.+.+ .||||....|.|+|.|+|+++ +++++++.|+|.|.|+|||+|+|... .|.+.|+|+. +|+.++.+.|+|
T Consensus 171 i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~-~y~~~V~En~-~g~~v~~v~a~D 248 (559)
T 3q2w_A 171 IITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAM-TFYGEVPENR-VDVIVANLTVTD 248 (559)
T ss_dssp EEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSS-EEEEEEESSC-SSEEEEEEEEEC
T ss_pred EEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccc-cceeEecCCC-CCcEEEEEEEEc
Confidence 56666 999999999999999999855 35889999999999999999999988 7899999997 899999999999
Q ss_pred CCCCC--CcEEEEEEeeCCCCCCcccEEE----eCCceEEEECccCCccCCCEEEEEEEEEeCC------CCCcceeEEE
Q psy8618 78 KDDGS--NATISYSILKGRDTDGYGVFTI----DPISGVIRTKSVLDHEDRSIYRIAVAATDNG------FPSRQTVRLL 145 (232)
Q Consensus 78 ~D~~~--~~~v~y~i~~~~~~~~~~~f~i----d~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~------~~~~~~~~~v 145 (232)
+|.+. ++.++|+|..+ +..++|.| ++.+|.|++.++||||....|.|.|.|+|++ .++++++++|
T Consensus 249 ~D~~~~~n~~~~y~i~~g---~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v 325 (559)
T 3q2w_A 249 KDQPHTPAWNAAYRISGG---DPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATV 325 (559)
T ss_dssp CSCTTSTTTSBCCEEEES---CTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEE
T ss_pred CCCCCCCceeEEEEEecC---CCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEE
Confidence 99875 56799999887 66789999 5789999999999999999999999999974 2568899999
Q ss_pred EEEEEecCCCCCeeeCCceEEEE-------------EeecCCCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCC
Q psy8618 146 RVEVLDLNDNRPTFTSSSLLFKV-------------SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDF 212 (232)
Q Consensus 146 ~i~v~d~Nd~~P~f~~~~~~~~v-------------~~~D~d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~ 212 (232)
.|+|.|+|| +|.|....|.+.| .++|+|.+.++.++|+|.. +...+|.|++.+|.|++.+.|||
T Consensus 326 ~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~--~~~~~f~Id~~tG~i~~~~~lDr 402 (559)
T 3q2w_A 326 SVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLS--DPANWLKIDPVNGQITTIAVLDR 402 (559)
T ss_dssp EEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEE--CTTCCEEECTTTCEEEESSCCCS
T ss_pred EEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEcc--CCccceEecCCceEEEEccccCc
Confidence 999999999 6999888776554 4589999989999999986 45689999999999999999999
Q ss_pred ccc----cEEEEEEEEEECCccCC
Q psy8618 213 ESR----SSYEFPVVATDRGKETQ 232 (232)
Q Consensus 213 e~~----~~y~l~V~a~D~g~~~q 232 (232)
|.. ..|.|.|.|+|+|.|++
T Consensus 403 E~~~~~~~~y~l~V~A~D~g~p~~ 426 (559)
T 3q2w_A 403 ESPNVKNNIYNATFLASDNGIPPM 426 (559)
T ss_dssp SSTTSCSSEEEEEEEEEECSSSCC
T ss_pred ccccccCCEEEEEEEEEcCCCCcc
Confidence 975 89999999999999864
No 9
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=7.4e-43 Score=303.94 Aligned_cols=222 Identities=27% Similarity=0.330 Sum_probs=200.2
Q ss_pred eEe-cCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCC-
Q psy8618 2 IST-REPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKD- 79 (232)
Q Consensus 2 i~~-~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D- 79 (232)
|.+ .++||||....|.|+|.|+|+|++++++.+.|+|.|.|+|||+|.|... .|.+.|+|+ ++|+.++++.|+|+|
T Consensus 178 i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~-~y~~~V~En-~~gt~v~~v~A~D~D~ 255 (546)
T 1l3w_A 178 ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPK-TYTALVPEN-EIGFEVQRLSVTDLDM 255 (546)
T ss_dssp EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCS-EEEEEEESS-SCCCEEEEECBCCCSC
T ss_pred EEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccc-cceEEEEeC-CCCCEEEEEEEEeCCC
Confidence 555 4789999999999999999999888999999999999999999999987 789999999 999999999999999
Q ss_pred -CCCCcEEEEEEeeCCCCCCcccEEEe----CCceEEEECccCCccCCCEEEEEEEEEeCCC---CCcceeEEEEEEEEe
Q psy8618 80 -DGSNATISYSILKGRDTDGYGVFTID----PISGVIRTKSVLDHEDRSIYRIAVAATDNGF---PSRQTVRLLRVEVLD 151 (232)
Q Consensus 80 -~~~~~~v~y~i~~~~~~~~~~~f~id----~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~---~~~~~~~~v~i~v~d 151 (232)
.+.++.++|+|.+ +..++|.|+ ..+|.|++.++||||....|.|.|.|+|++. +.++++++|.|+|.|
T Consensus 256 ~~g~n~~v~y~i~~----~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~D 331 (546)
T 1l3w_A 256 PGTPAWQAVYKIRV----NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 331 (546)
T ss_dssp TTSTTSCEECCBSC----CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEEC
T ss_pred CCCCCcEEEEEEEe----CCCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEc
Confidence 6788999999965 345789995 2689999999999999999999999999863 467889999999999
Q ss_pred cCCCCCeeeCCce-------------EEEEEeecCCCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCccc---
Q psy8618 152 LNDNRPTFTSSSL-------------LFKVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESR--- 215 (232)
Q Consensus 152 ~Nd~~P~f~~~~~-------------~~~v~~~D~d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~--- 215 (232)
+|| +|.|....| ..+|.++|+|.+.++.++|+|.+ +..++|.|++.+|.|++.+.||||..
T Consensus 332 vND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~--~~~~~F~Id~~tG~i~~~~~lD~E~~~~~ 408 (546)
T 1l3w_A 332 VNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN--DPARWLTVNKDNGIVTGNGNLDRESEYVK 408 (546)
T ss_dssp CCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC--CSSCCCEEETTTTEEEECSCCCTTSSSCC
T ss_pred CCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECC--CCCCcEEEeCCcEEEEECCccCCccccCC
Confidence 999 999987654 55677899999999999999987 45689999999999999999999987
Q ss_pred -cEEEEEEEEEECCccCC
Q psy8618 216 -SSYEFPVVATDRGKETQ 232 (232)
Q Consensus 216 -~~y~l~V~a~D~g~~~q 232 (232)
..|.|.|.|+|+|.|++
T Consensus 409 ~~~y~l~V~a~D~g~p~~ 426 (546)
T 1l3w_A 409 NNTYTVIMLVTDDGVSVG 426 (546)
T ss_dssp SSCCEEEEEEEECSSSCC
T ss_pred CCEEEEEEEEEECCCCCc
Confidence 89999999999998763
No 10
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=7.3e-42 Score=289.13 Aligned_cols=217 Identities=29% Similarity=0.441 Sum_probs=192.0
Q ss_pred eEecCCCCcCCCCeEEEEEEEEeCCCC----CceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEe
Q psy8618 2 ISTREPLDREARSSHELVAEARDQGSP----PRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVD 77 (232)
Q Consensus 2 i~~~~~lD~E~~~~~~l~v~a~d~~~~----~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D 77 (232)
|.+.+.||||....|.|+|.|+|++++ ++++.+.++|.|.| |||+|.|... .|.+.|+|+.++|+.|+++.|+|
T Consensus 168 i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~-~y~~~v~En~~~gt~v~~v~A~D 245 (419)
T 3ubh_A 168 VRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMP-SYEAEIPENQKKDSDIISIKAKS 245 (419)
T ss_dssp EEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSS-CEEEEEETTCCTTCEEEECCEEC
T ss_pred EEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecC-eeEEEecCCCCCCcEEEEEEEec
Confidence 678889999999999999999998764 56788889999999 9999999988 78999999999999999999999
Q ss_pred CCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCC---EEEEEEEEEeCCCCCcceeEEEEEEEEecCC
Q psy8618 78 KDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRS---IYRIAVAATDNGFPSRQTVRLLRVEVLDLND 154 (232)
Q Consensus 78 ~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~---~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd 154 (232)
+| ++.++|+|.... +..++|.|++.+|.|++.++||||... .|.|.|.|+|.+ +++++.+.|.|+|.|+||
T Consensus 246 ~d---n~~i~Ysi~~~~--~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~-~~~s~~~~v~I~V~DvND 319 (419)
T 3ubh_A 246 FA---DREIRYTLKAQG--QGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDS-GGFSTSVDLTIRVTDVND 319 (419)
T ss_dssp SS---CCCCEEEEEESS--SCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTT-TSCEEEEEEEEEEECCCC
T ss_pred CC---CCceEEEEecCC--CCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCC-CCcEEEEEEEEEEEccCC
Confidence 86 667999997421 456899999999999999999999865 799999999754 367888999999999999
Q ss_pred CCCeeeCCceEE-E-------------EEeecCCCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCcc-ccEEE
Q psy8618 155 NRPTFTSSSLLF-K-------------VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFES-RSSYE 219 (232)
Q Consensus 155 ~~P~f~~~~~~~-~-------------v~~~D~d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~-~~~y~ 219 (232)
|+|.|....|.+ . |.++|+|.+.++.++|+|.+ ++|.|++ +|.|.+.+.||||. ...|.
T Consensus 320 n~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~-----~~F~Id~-~G~i~~~~~ld~E~~~~~y~ 393 (419)
T 3ubh_A 320 NAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD-----DHFAVDS-NGIIVNNKQLDADNNNAYYE 393 (419)
T ss_dssp CCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC-----TTEEECT-TCEEEECSCSSSSCTTCEEE
T ss_pred CCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC-----CcEEECC-CeEEEECcccCcccCCceEE
Confidence 999999887754 3 45589999999999999974 3799997 99999999999998 67999
Q ss_pred EEEEEEECCccCC
Q psy8618 220 FPVVATDRGKETQ 232 (232)
Q Consensus 220 l~V~a~D~g~~~q 232 (232)
|.|.|+|+|.|++
T Consensus 394 l~V~a~D~G~p~~ 406 (419)
T 3ubh_A 394 FIVTAKDKGEPPK 406 (419)
T ss_dssp EEEEEEECCSSCC
T ss_pred EEEEEEECCcCCc
Confidence 9999999999974
No 11
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=2.9e-41 Score=285.42 Aligned_cols=219 Identities=25% Similarity=0.327 Sum_probs=189.7
Q ss_pred eEecCCCCcCCC---CeEEEEEEEEeCCCC---CceeEEEEEEEEEeCCCCCCeecCCCc-eEEEEecCCCCCcEEEEEE
Q psy8618 2 ISTREPLDREAR---SSHELVAEARDQGSP---PRSSRVAVKISVTDVNDNAPELVDPQE-DVISVREEQPPGTEVVRAR 74 (232)
Q Consensus 2 i~~~~~lD~E~~---~~~~l~v~a~d~~~~---~~~~~~~v~v~V~dvNd~~P~f~~~~~-~~~~v~E~~~~g~~v~~v~ 74 (232)
|.+.++||||+. ..|.|.|.|+|.+.+ ..++.+.|+|.|.|+|||+|.|..... |...|+|++++|+.++++.
T Consensus 57 i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~ 136 (419)
T 3ubh_A 57 VRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQ 136 (419)
T ss_dssp EEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECC
T ss_pred EEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEE
Confidence 788999999998 799999999998754 577889999999999999999998632 6899999999999999999
Q ss_pred EEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeCCCC----CcceeEEEEEEEE
Q psy8618 75 AVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDNGFP----SRQTVRLLRVEVL 150 (232)
Q Consensus 75 a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~~----~~~~~~~v~i~v~ 150 (232)
|+|+|.+.+ ++|+|..+ ...++|.|++.+|.|++.+.+|+|....|.|.|.|+|++.+ .+++++.+.|.|.
T Consensus 137 A~D~D~g~n--~~y~i~~~---~~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~ 211 (419)
T 3ubh_A 137 ARDPDTDHN--IHYFIVRD---RTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIV 211 (419)
T ss_dssp EECSSTTCC--EEEEEEEE---SSSSCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEE
T ss_pred EECCCCCce--eEEEEEeC---CCCCeEEEeCCceEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEE
Confidence 999998776 89999877 55689999999999999999999999999999999998754 4677788999999
Q ss_pred ecCCCCCeeeCCceEEEEEeecCCCCC-------------CeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCcccc-
Q psy8618 151 DLNDNRPTFTSSSLLFKVSASDPDCGV-------------NAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESRS- 216 (232)
Q Consensus 151 d~Nd~~P~f~~~~~~~~v~~~D~d~~~-------------~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~~- 216 (232)
| |||+|.|....|.++|.| +.++ ++.++|+|....+..+.|.|++.+|.|++.++||||...
T Consensus 212 d-ndn~P~F~~~~y~~~v~E---n~~~gt~v~~v~A~D~dn~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~ 287 (419)
T 3ubh_A 212 G-GKRAPQFYMPSYEAEIPE---NQKKDSDIISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQ 287 (419)
T ss_dssp E-SCCCCEESSSCEEEEEET---TCCTTCEEEECCEECSSCCCCEEEEEESSSCCSSEEECTTTCEEEECSCCCTTCTTS
T ss_pred C-CCCCCceecCeeEEEecC---CCCCCcEEEEEEEecCCCCceEEEEecCCCCCCcEEEECCCCEEEECcccCcccccc
Confidence 9 999999999999888877 4433 445699997433667899999999999999999999865
Q ss_pred --EEEEEEEEEECCc
Q psy8618 217 --SYEFPVVATDRGK 229 (232)
Q Consensus 217 --~y~l~V~a~D~g~ 229 (232)
.|.|.|.|+|.+.
T Consensus 288 ~~~y~l~V~a~dd~~ 302 (419)
T 3ubh_A 288 PHVYSLIVTATEDSG 302 (419)
T ss_dssp CSEEEEEEEEECTTT
T ss_pred ccEEEEEEEEEeCCC
Confidence 7999999997543
No 12
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=3.2e-41 Score=306.65 Aligned_cols=222 Identities=27% Similarity=0.339 Sum_probs=200.2
Q ss_pred eEec-CCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCC-
Q psy8618 2 ISTR-EPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKD- 79 (232)
Q Consensus 2 i~~~-~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D- 79 (232)
|.+. +.||||....|.|+|.|+|++++++++.+.|+|.|.|+|||+|+|... .|.+.|+|+ ++|+.|+++.|+|+|
T Consensus 327 I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~-~y~~~V~En-~~gt~V~~v~A~D~D~ 404 (880)
T 1q55_A 327 ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPK-TYTALVPEN-EIGFEVQRLSVTDLDM 404 (880)
T ss_dssp EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCS-EEEEEEESS-SCCCEEEEECBCCCSC
T ss_pred EEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCcccc-ceEEEeecC-CCCcEEEEEEEECCCC
Confidence 5554 789999999999999999999888999999999999999999999987 789999999 999999999999999
Q ss_pred -CCCCcEEEEEEeeCCCCCCcccEEEe--C--CceEEEECccCCccCCCEEEEEEEEEeCCC---CCcceeEEEEEEEEe
Q psy8618 80 -DGSNATISYSILKGRDTDGYGVFTID--P--ISGVIRTKSVLDHEDRSIYRIAVAATDNGF---PSRQTVRLLRVEVLD 151 (232)
Q Consensus 80 -~~~~~~v~y~i~~~~~~~~~~~f~id--~--~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~---~~~~~~~~v~i~v~d 151 (232)
.+.|+.++|+|.+ +..++|.|+ + .+|.|++.++||||....|.|.|.|+|++. +.++++++|+|+|.|
T Consensus 405 ~~g~n~~v~Ysi~~----~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~D 480 (880)
T 1q55_A 405 PGTPAWQAVYKIRV----NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVED 480 (880)
T ss_dssp TTSTTSCEECCBSC----CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEEC
T ss_pred CCCCCceEEEEEec----CCCceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEe
Confidence 6778999999965 346789995 3 679999999999999999999999999873 467889999999999
Q ss_pred cCCCCCeeeCCce-------------EEEEEeecCCCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCccc---
Q psy8618 152 LNDNRPTFTSSSL-------------LFKVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESR--- 215 (232)
Q Consensus 152 ~Nd~~P~f~~~~~-------------~~~v~~~D~d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~--- 215 (232)
+|| +|.|....| ..+|.++|+|.+.++.++|+|.. +..++|.|++.+|.|++.+.||||..
T Consensus 481 vND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~--~~~~~F~Id~~tG~I~~~~~LDrE~~~~~ 557 (880)
T 1q55_A 481 VNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN--DPARWLTVNKDNGIVTGNGNLDRESEYVK 557 (880)
T ss_dssp CCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC--CSSCCCEEETTTTEEEECSCCCTTSSSCC
T ss_pred CCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC--CCCCCEEEeCCccEEEECCccCcccccCC
Confidence 999 999987655 45677899999999999999987 45789999999999999999999987
Q ss_pred -cEEEEEEEEEECCccCC
Q psy8618 216 -SSYEFPVVATDRGKETQ 232 (232)
Q Consensus 216 -~~y~l~V~a~D~g~~~q 232 (232)
..|+|.|.|+|+|.|++
T Consensus 558 ~~~y~l~V~A~D~g~p~~ 575 (880)
T 1q55_A 558 NNTYTVIMLVTDDGVSVG 575 (880)
T ss_dssp SSCCEEEEEEEECSSSCC
T ss_pred CCEEEEEEEEEECCCCCc
Confidence 89999999999998763
No 13
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=1.9e-36 Score=233.69 Aligned_cols=152 Identities=30% Similarity=0.483 Sum_probs=134.6
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCC-CCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGS-PPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKD 79 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~-~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D 79 (232)
+|.+.++||||.+..|.|+|.|+|+++ +++++.+.|+|.|.|+|||+|.|... .|.+.|+|+.++|+.|+++.|+|+|
T Consensus 57 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~v~E~~~~Gt~v~~v~A~D~D 135 (215)
T 2a4e_A 57 NIHATKTLDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHE-IYHANVPERSNVGTSVIQVTASDAD 135 (215)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSS-SEEEEEETTCCTTCEEEECCEECSS
T ss_pred EEEECCccCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCC-ceEEEEECCCCCCCEEEEEEEEECC
Confidence 378899999999999999999999875 56788999999999999999999987 7899999999999999999999999
Q ss_pred C---CCCcEEEEEEeeCCCCCCcccEEEeCCceEEEEC-ccCCccCCCEEEEEEEEEeCCCC--CcceeEEEEEEEEecC
Q psy8618 80 D---GSNATISYSILKGRDTDGYGVFTIDPISGVIRTK-SVLDHEDRSIYRIAVAATDNGFP--SRQTVRLLRVEVLDLN 153 (232)
Q Consensus 80 ~---~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~-~~ld~e~~~~~~l~v~a~d~~~~--~~~~~~~v~i~v~d~N 153 (232)
. |.|+.++|+|..+. .+|.|++.+|.|++. +.||||....|.|.|.|+|+|.| ++++++.|.|+|.|+|
T Consensus 136 ~~~~G~n~~i~Y~i~~~~-----~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvN 210 (215)
T 2a4e_A 136 DPTYGNSAKLVYSILEGQ-----PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDY 210 (215)
T ss_dssp CTTTCSSSCCEEEEEEST-----TTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC--
T ss_pred CCCCCCceEEEEEEeCCC-----CcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECC
Confidence 7 77889999998762 479999999999999 99999999999999999999876 5889999999999999
Q ss_pred CCCCe
Q psy8618 154 DNRPT 158 (232)
Q Consensus 154 d~~P~ 158 (232)
||+|+
T Consensus 211 Dn~P~ 215 (215)
T 2a4e_A 211 KDDDK 215 (215)
T ss_dssp -----
T ss_pred CCCCC
Confidence 99995
No 14
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=1.3e-36 Score=234.34 Aligned_cols=172 Identities=27% Similarity=0.479 Sum_probs=153.4
Q ss_pred CCCCeecCCCceE--EEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCC
Q psy8618 45 DNAPELVDPQEDV--ISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDR 122 (232)
Q Consensus 45 d~~P~f~~~~~~~--~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~ 122 (232)
|++|.|... .|. +.|+|++++|+.++++.|+|+|. +.++|+|.++ +..++|.|++.+|.|++.+.||||..
T Consensus 3 n~~P~F~~~-~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~---~~~~~F~Id~~tG~i~~~~~LD~E~~ 75 (210)
T 3mvs_A 3 NRLPFFTNH-FFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGE---EASRFFAVEPDTGVVWLRQPLDRETK 75 (210)
T ss_dssp CCCCEECCG-GGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESH---HHHHHEEECTTTCEEEESSCCCTTTC
T ss_pred CCCCccCCC-ccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCC---CCCCcEEEeCCCCEEEECCccCCccc
Confidence 459999987 565 79999999999999999999994 3589999655 45689999999999999999999999
Q ss_pred CEEEEEEEEEeCCCCCcceeEEEEEEEEecCCCCCeeeCCceEEEEE-------------eecCCCCCCeEEEEEEccCC
Q psy8618 123 SIYRIAVAATDNGFPSRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVS-------------ASDPDCGVNAMVNYTLGESP 189 (232)
Q Consensus 123 ~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~-------------~~D~d~~~~~~i~y~l~~~~ 189 (232)
..|.|.|.|+|++. ...+.|.|+|.|+|||+|.|....|.+.|. ++|+|.+.++.++|+|..+
T Consensus 76 ~~y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~- 151 (210)
T 3mvs_A 76 SEFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP- 151 (210)
T ss_dssp CEEEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSC-
T ss_pred ceEEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCC-
Confidence 99999999999864 356789999999999999999988766655 4899988888999999853
Q ss_pred CCCCcEEEECCceEEEEeecCCCccccEEEEEEEEEECCc
Q psy8618 190 SRTNHFYMKSVSGEICISQDLDFESRSSYEFPVVATDRGK 229 (232)
Q Consensus 190 ~~~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~ 229 (232)
.+.|.|++.+|.|++.++||||....|.|.|.|+|+|.
T Consensus 152 --~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~ 189 (210)
T 3mvs_A 152 --SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDK 189 (210)
T ss_dssp --CSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCS
T ss_pred --CCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCC
Confidence 57999999999999999999999999999999999994
No 15
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=243.33 Aligned_cols=154 Identities=20% Similarity=0.225 Sum_probs=138.4
Q ss_pred eEecCCCCcCCCCeE------------EEEEEEEeCCCC--CceeEEEEEEEEEeCCCCCCe----------ecCCCceE
Q psy8618 2 ISTREPLDREARSSH------------ELVAEARDQGSP--PRSSRVAVKISVTDVNDNAPE----------LVDPQEDV 57 (232)
Q Consensus 2 i~~~~~lD~E~~~~~------------~l~v~a~d~~~~--~~~~~~~v~v~V~dvNd~~P~----------f~~~~~~~ 57 (232)
|.++++||||....| .|+|.|+|++.+ +.++.+.|+|.|.|+|||+|. |... .|.
T Consensus 67 i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~-~y~ 145 (246)
T 2x2u_A 67 LYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPET-RPS 145 (246)
T ss_dssp EEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSS-CCC
T ss_pred EEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCC-cEE
Confidence 789999999999999 999999999887 678889999999999999999 9987 789
Q ss_pred EEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe-CCC
Q psy8618 58 ISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD-NGF 136 (232)
Q Consensus 58 ~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d-~~~ 136 (232)
+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..+ . ..+|.|++.+|.|++.+.||||....|.|.|.|+| .|.
T Consensus 146 ~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~---~-~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~ 221 (246)
T 2x2u_A 146 FRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEG---E-GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGA 221 (246)
T ss_dssp EEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESC---T-TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---
T ss_pred EEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccC---C-CCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCC
Confidence 999999999999999999999999999999999765 2 67899999999999999999999999999999998 555
Q ss_pred CCcceeEEEEEEEEecCCCCCeee
Q psy8618 137 PSRQTVRLLRVEVLDLNDNRPTFT 160 (232)
Q Consensus 137 ~~~~~~~~v~i~v~d~Nd~~P~f~ 160 (232)
|+++++++|.|+|.|+|||+|.|.
T Consensus 222 p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 222 REEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred CcceEEEEEEEEEEEeCCCCCccC
Confidence 889999999999999999999995
No 16
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=1e-34 Score=224.01 Aligned_cols=168 Identities=30% Similarity=0.389 Sum_probs=148.6
Q ss_pred ceEEEEecCC--CCCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEE
Q psy8618 55 EDVISVREEQ--PPGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAAT 132 (232)
Q Consensus 55 ~~~~~v~E~~--~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~ 132 (232)
.+.+.|.|+. +.|+.|+.+ |+|+|.+ ++.++|+|.++ ....+|.|++.+|.|++.+.||||....|.|.|.|+
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 79 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGE---GAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAV 79 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEET---TBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECC---CCCCeEEEECCceEEEECCccCCccCCEEEEEEEEE
Confidence 3578999994 578999988 8999987 67899999765 445789999999999999999999999999999999
Q ss_pred eCCC-CCcceeEEEEEEEEecCCCCCeeeCCceEEEEE-------------eecCCC---CCCeEEEEEEccCCCCCCcE
Q psy8618 133 DNGF-PSRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVS-------------ASDPDC---GVNAMVNYTLGESPSRTNHF 195 (232)
Q Consensus 133 d~~~-~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~-------------~~D~d~---~~~~~i~y~l~~~~~~~~~f 195 (232)
|++. +++++.+.|.|+|.|+|||+|.|....|.++|. ++|+|. +.++.++|+|..+ ...|
T Consensus 80 D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~---~~~F 156 (215)
T 2a4e_A 80 DRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEG---QPYF 156 (215)
T ss_dssp ETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEES---TTTE
T ss_pred ECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCC---CCcE
Confidence 9975 567888999999999999999999888766554 588897 6778999999875 4689
Q ss_pred EEECCceEEEEe-ecCCCccccEEEEEEEEEECCcc
Q psy8618 196 YMKSVSGEICIS-QDLDFESRSSYEFPVVATDRGKE 230 (232)
Q Consensus 196 ~i~~~~G~i~~~-~~ld~e~~~~y~l~V~a~D~g~~ 230 (232)
.|++.+|.|++. +.||||....|.|.|.|+|+|.|
T Consensus 157 ~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~ 192 (215)
T 2a4e_A 157 SVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGH 192 (215)
T ss_dssp EECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTC
T ss_pred EEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCC
Confidence 999999999999 99999999999999999999976
No 17
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=5.6e-35 Score=225.71 Aligned_cols=173 Identities=26% Similarity=0.352 Sum_probs=153.1
Q ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCC-CCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeCC
Q psy8618 57 VISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRD-TDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDNG 135 (232)
Q Consensus 57 ~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~-~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~ 135 (232)
.+.|+|+++ |+.++.+.+.|.|.+.++.++|+|.++.. ....++|.|++.+|.|++.++||||....|.|.|.|+|++
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 589999999 88889999999998889999999976421 1235799999999999999999999999999999999999
Q ss_pred CCCcceeEEEEEEEEecCCCCCeeeCCceEEEEE-------------eecCCC--CCCeEEEEEEccCCC---CCCcEEE
Q psy8618 136 FPSRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVS-------------ASDPDC--GVNAMVNYTLGESPS---RTNHFYM 197 (232)
Q Consensus 136 ~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~-------------~~D~d~--~~~~~i~y~l~~~~~---~~~~f~i 197 (232)
.+++++.+.|.|+|.|+|||+|.|....|.+.|. ++|+|. +.++.++|+|..+.. ....|.|
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (215)
T 2qvi_A 85 GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTI 164 (215)
T ss_dssp TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEE
T ss_pred CCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEE
Confidence 9999999999999999999999999888766554 488898 678899999987621 4689999
Q ss_pred ECCceEEEEe-ecCCCccccEEEEEEEEEECCcc
Q psy8618 198 KSVSGEICIS-QDLDFESRSSYEFPVVATDRGKE 230 (232)
Q Consensus 198 ~~~~G~i~~~-~~ld~e~~~~y~l~V~a~D~g~~ 230 (232)
++.+|.|++. ++||||....|.|.|.|+|+|.|
T Consensus 165 d~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~ 198 (215)
T 2qvi_A 165 NNETGDIITVAAGLDREKVQQYTLIIQATDMEGN 198 (215)
T ss_dssp CTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTC
T ss_pred cCCCcEEEEecCCCCcccCCeEEEEEEEEECCCC
Confidence 9999999995 78999999999999999999876
No 18
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=6.5e-34 Score=219.22 Aligned_cols=146 Identities=30% Similarity=0.430 Sum_probs=136.0
Q ss_pred eEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCC
Q psy8618 2 ISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDG 81 (232)
Q Consensus 2 i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~ 81 (232)
|.+.++||||....|.|+|.|+|+++ .+.+.|+|.|.|+|||+|.|... .|.+.|+|+.++|+.++++.|+|+|.|
T Consensus 64 i~~~~~LD~E~~~~y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~-~y~~~v~E~~~~gt~v~~v~A~D~D~g 139 (210)
T 3mvs_A 64 VWLRQPLDRETKSEFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQ-PYSVRIPENTPVGTPIFIVNATDPDLG 139 (210)
T ss_dssp EEESSCCCTTTCCEEEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSC-SEEEEEETTCCTTCEEEECCEECCSSG
T ss_pred EEECCccCCcccceEEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCc-eEEEEEECCCCCCCEEEEEEEEeCCCC
Confidence 78899999999999999999999875 46789999999999999999988 789999999999999999999999999
Q ss_pred CCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeCC-CCCcceeEEEEEEEEecCCCC
Q psy8618 82 SNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDNG-FPSRQTVRLLRVEVLDLNDNR 156 (232)
Q Consensus 82 ~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~-~~~~~~~~~v~i~v~d~Nd~~ 156 (232)
.++.++|+|..+ .++|.|++.+|.|++.++||||....|.|.|.|+|++ .+++++.+.|.|+|.|+|||+
T Consensus 140 ~n~~v~Y~i~~~-----~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 140 AGGSVLYSFQPP-----SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp GGGCEEEEESSC-----CSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred CCceEEEEEeCC-----CCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 999999999643 4689999999999999999999999999999999998 468899999999999999975
No 19
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=2.3e-34 Score=222.30 Aligned_cols=173 Identities=28% Similarity=0.353 Sum_probs=151.4
Q ss_pred EEEEecCCC--CCcEEEEEEEEeCCCCCCcEEEEEEeeCCC-CCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe
Q psy8618 57 VISVREEQP--PGTEVVRARAVDKDDGSNATISYSILKGRD-TDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD 133 (232)
Q Consensus 57 ~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~-~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d 133 (232)
.+.|+|+.+ .|+.++++.| |.| .++.++|+|.++.. .+..++|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d--~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 82 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRD--KETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVS 82 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGG--GTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCC--CCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEe
Confidence 589999998 6788999999 777 47889999976422 13456999999999999999999999999999999999
Q ss_pred CCCCCcceeEEEEEEEEecCCCCCeeeCCceEEEEE-------------eecCCCC---CCeEEEEEEccCC---CCCCc
Q psy8618 134 NGFPSRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVS-------------ASDPDCG---VNAMVNYTLGESP---SRTNH 194 (232)
Q Consensus 134 ~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~-------------~~D~d~~---~~~~i~y~l~~~~---~~~~~ 194 (232)
.+.+++++.+.|.|+|.|+|||+|.|....|.+.|. ++|+|.+ .++.++|+|..+. .....
T Consensus 83 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~ 162 (213)
T 3qrb_A 83 SNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNM 162 (213)
T ss_dssp TTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCS
T ss_pred CCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCe
Confidence 998888999999999999999999999988866655 4899988 7889999998641 14579
Q ss_pred EEEECCceEEEEe-ecCCCccccEEEEEEEEEECCccCC
Q psy8618 195 FYMKSVSGEICIS-QDLDFESRSSYEFPVVATDRGKETQ 232 (232)
Q Consensus 195 f~i~~~~G~i~~~-~~ld~e~~~~y~l~V~a~D~g~~~q 232 (232)
|.|++.+|.|.+. ++||||....|.|.|.|+|+|.|++
T Consensus 163 F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~ 201 (213)
T 3qrb_A 163 FTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGL 201 (213)
T ss_dssp EEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSC
T ss_pred EEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCc
Confidence 9999999999997 7899999999999999999998753
No 20
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=2e-33 Score=215.19 Aligned_cols=165 Identities=27% Similarity=0.333 Sum_probs=146.8
Q ss_pred eEEEEecCCCCC--cEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe
Q psy8618 56 DVISVREEQPPG--TEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD 133 (232)
Q Consensus 56 ~~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d 133 (232)
..+.|+|+.+.| ..++++. .|+|.+.+ +|+|.++ +..++|.|++.+|.|++.+.||||....|.|.|.|+|
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 77 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGE---SANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIID 77 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEET---TBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEE
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecC---CCCCeEEEECCcCEEEECccccccccceEEEEEEEEE
Confidence 368999999988 8889888 99997765 9999866 5567999999999999999999999999999999999
Q ss_pred CCCC-CcceeEEEEEEEEecCCCCCeeeCCceEEEEE-------------eecCCC---CCCeEEEEEEccCCCCCCcEE
Q psy8618 134 NGFP-SRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVS-------------ASDPDC---GVNAMVNYTLGESPSRTNHFY 196 (232)
Q Consensus 134 ~~~~-~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~-------------~~D~d~---~~~~~i~y~l~~~~~~~~~f~ 196 (232)
++.+ ++++.+.|.|+|.|+|||+|.|....|.++|. ++|+|. +.++.++|+|..+ ...|.
T Consensus 78 ~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~---~~~F~ 154 (203)
T 3ppe_A 78 RRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKG---NEYFT 154 (203)
T ss_dssp TTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEES---TTTEE
T ss_pred CCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCC---CCcEE
Confidence 9876 67888999999999999999999988866655 488884 6788999999975 35999
Q ss_pred EECCceEEEEe-ecCCCccccEEEEEEEEEEC-CccC
Q psy8618 197 MKSVSGEICIS-QDLDFESRSSYEFPVVATDR-GKET 231 (232)
Q Consensus 197 i~~~~G~i~~~-~~ld~e~~~~y~l~V~a~D~-g~~~ 231 (232)
|+ .+|.|++. ++||||....|.|.|.|+|+ |.|+
T Consensus 155 I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~ 190 (203)
T 3ppe_A 155 VD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLTG 190 (203)
T ss_dssp EC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCC
T ss_pred Ee-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCC
Confidence 99 99999999 99999999999999999998 7764
No 21
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=9.8e-34 Score=218.76 Aligned_cols=149 Identities=33% Similarity=0.395 Sum_probs=138.4
Q ss_pred eEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCC
Q psy8618 2 ISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDG 81 (232)
Q Consensus 2 i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~ 81 (232)
|.+.++||||.+..|.|+|.|+|.+++++++.+.|+|.|.|+|||+|.|... .|.+.|+|+.++|+.|+++.|+|+|.+
T Consensus 60 i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~v~En~~~gt~v~~v~A~D~D~~ 138 (213)
T 3qrb_A 60 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQE-VFEGSVAEGAVPGTSVMKVSATDADDD 138 (213)
T ss_dssp EEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCS-EEEEEEETTCCTTCEEEECCEECCSCT
T ss_pred EEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCC-ceEEEEECCCCCCcEEEEEEEEeCCCC
Confidence 7889999999999999999999999988889999999999999999999987 789999999999999999999999998
Q ss_pred ---CCcEEEEEEeeCCCC-CCcccEEEeCCceEEEEC-ccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEEEEe
Q psy8618 82 ---SNATISYSILKGRDT-DGYGVFTIDPISGVIRTK-SVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVLD 151 (232)
Q Consensus 82 ---~~~~v~y~i~~~~~~-~~~~~f~id~~tG~i~~~-~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 151 (232)
.|+.++|+|.++.+. ...++|.|++.+|.|++. +.||||....|.|.|.|+|+|.|+++++++|.|+|.|
T Consensus 139 ~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 139 VNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp TTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred CCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 789999999876432 145789999999999997 7899999999999999999999999999999999986
No 22
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=233.45 Aligned_cols=176 Identities=19% Similarity=0.161 Sum_probs=146.0
Q ss_pred eecCCCceEEEEecCCCCCcEEEEEEEEeCCCCC--CcEEE------EEEeeCCCCCCcccEEEeCCceEEEECccCCcc
Q psy8618 49 ELVDPQEDVISVREEQPPGTEVVRARAVDKDDGS--NATIS------YSILKGRDTDGYGVFTIDPISGVIRTKSVLDHE 120 (232)
Q Consensus 49 ~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~--~~~v~------y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e 120 (232)
.|.+. .|.+.|+|++++|+.|+++.|+|+|.+. +..+. |++..+ ...+|.|++.+|.|++.++||||
T Consensus 2 ~F~~~-~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~----~~~~F~Id~~tG~i~~~~~LDrE 76 (246)
T 2x2u_A 2 YFSRD-AYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH----ENNWIRIQEDTGLLYLQRSLDHS 76 (246)
T ss_dssp EESCS-EEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE----ECCSEEECTTTCEEEESSCBCHH
T ss_pred CccCC-ceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC----CCCEEEECCCcEEEEECCcCChh
Confidence 47776 7899999999999999999999999854 33343 444322 35789999999999999999999
Q ss_pred CCCEE------------EEEEEEEeCCCC--CcceeEEEEEEEEecCCCCCe----------eeCCceEEEEEe------
Q psy8618 121 DRSIY------------RIAVAATDNGFP--SRQTVRLLRVEVLDLNDNRPT----------FTSSSLLFKVSA------ 170 (232)
Q Consensus 121 ~~~~~------------~l~v~a~d~~~~--~~~~~~~v~i~v~d~Nd~~P~----------f~~~~~~~~v~~------ 170 (232)
....| .|.|.|+|++.+ ++++++.|.|+|.|+|||+|. |....|.+.|.|
T Consensus 77 ~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt 156 (246)
T 2x2u_A 77 SWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGT 156 (246)
T ss_dssp HHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCE
T ss_pred HhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCc
Confidence 99889 999999999987 678889999999999999999 999888887776
Q ss_pred -------ecCCCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCccccEEEEEEEEEE-CCccC
Q psy8618 171 -------SDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESRSSYEFPVVATD-RGKET 231 (232)
Q Consensus 171 -------~D~d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D-~g~~~ 231 (232)
+|+|.+.++.|+|+|..+ ....|.|++.+|.|++.++||||....|.|.|.|+| .|.|+
T Consensus 157 ~v~~v~A~D~D~g~n~~i~Y~i~~~--~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~ 223 (246)
T 2x2u_A 157 FHQFRLLPVQFLCPQISVAYRLLEG--EGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGARE 223 (246)
T ss_dssp EEECSCHHHHHHCTTSCEEEEEESC--TTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CC
T ss_pred EEEEEEEEcCCCCCCcEEEEEEccC--CCCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCc
Confidence 677777777889999975 278999999999999999999999999999999998 55554
No 23
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=8.5e-34 Score=219.09 Aligned_cols=150 Identities=32% Similarity=0.388 Sum_probs=137.6
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDD 80 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 80 (232)
.|.++++||||.++.|.|+|.|+|++++++++.+.|+|.|.|+|||+|.|... .|.+.|+|+.++|+.|+++.|+|+|.
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~v~En~~~gt~v~~v~A~D~D~ 137 (215)
T 2qvi_A 59 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQ-VWNGSVPEGSKPGTYVMTVTAIDADD 137 (215)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSS-EEEEEECSSCCTTCEEEECCCBCSSC
T ss_pred EEEECcccCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCc-eeEEEEeCCCCCCCEEEEEEEEeCCC
Confidence 37889999999999999999999999999999999999999999999999987 78999999999999999999999998
Q ss_pred --CCCcEEEEEEeeCCCC-CCcccEEEeCCceEEEEC-ccCCccCCCEEEEEEEEEeCCCC---CcceeEEEEEEEEe
Q psy8618 81 --GSNATISYSILKGRDT-DGYGVFTIDPISGVIRTK-SVLDHEDRSIYRIAVAATDNGFP---SRQTVRLLRVEVLD 151 (232)
Q Consensus 81 --~~~~~v~y~i~~~~~~-~~~~~f~id~~tG~i~~~-~~ld~e~~~~~~l~v~a~d~~~~---~~~~~~~v~i~v~d 151 (232)
+.|+.++|+|..+.+. ...+.|.|++.+|.|++. +.||||....|.|.|.|+|++.+ +++++++|.|+|.|
T Consensus 138 ~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 138 PNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp TTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred CCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 6799999999887421 146889999999999995 78999999999999999999877 78999999999876
No 24
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=1.8e-33 Score=217.98 Aligned_cols=171 Identities=27% Similarity=0.378 Sum_probs=148.7
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCCCcEEEEEEeeCC-CCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe
Q psy8618 57 VISVREEQPPG--TEVVRARAVDKDDGSNATISYSILKGR-DTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD 133 (232)
Q Consensus 57 ~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~v~y~i~~~~-~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d 133 (232)
.+.|+|+.+.| +.++++.|.|.|. .++|+|..+. ..+..++|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 82 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEE
Confidence 58999999988 8899999998874 5899996532 224568999999999999999999999999999999999
Q ss_pred CCCCCcceeEEEEEEEEecCCCCCeeeCCceEEEEEe-------------ecCCC--CCCeEEEEEEccCCCC---CCcE
Q psy8618 134 NGFPSRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVSA-------------SDPDC--GVNAMVNYTLGESPSR---TNHF 195 (232)
Q Consensus 134 ~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~~-------------~D~d~--~~~~~i~y~l~~~~~~---~~~f 195 (232)
++.+++++.+.|.|+|.|+|||+|.|....|.+.|.| +|+|. +.++.++|+|..+... ...|
T Consensus 83 ~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F 162 (218)
T 3k5r_A 83 ASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMF 162 (218)
T ss_dssp SSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSE
T ss_pred CCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEE
Confidence 9998899999999999999999999999888776655 78888 5689999999875222 3689
Q ss_pred EEECCceEEEEe---ecCCCcc--ccEEEEEEEEEECC--ccC
Q psy8618 196 YMKSVSGEICIS---QDLDFES--RSSYEFPVVATDRG--KET 231 (232)
Q Consensus 196 ~i~~~~G~i~~~---~~ld~e~--~~~y~l~V~a~D~g--~~~ 231 (232)
.|++.+|.|.+. +.||||. .+.|.|.|.|+|+| .|+
T Consensus 163 ~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~ 205 (218)
T 3k5r_A 163 YIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVG 205 (218)
T ss_dssp EECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTT
T ss_pred EEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCC
Confidence 999999999987 6899999 67999999999999 664
No 25
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=3e-33 Score=216.78 Aligned_cols=150 Identities=29% Similarity=0.384 Sum_probs=136.9
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDD 80 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 80 (232)
.|.++++||||.+..|.|+|.|+|++++++++.+.|+|.|.|+|||+|.|... .|.+.|+|+.++|+.|+++.|+|+|.
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~v~E~~~~gt~v~~v~A~D~D~ 137 (218)
T 3k5r_A 59 SVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREG-PYIGHVMEGSPTGTTVMRMTAFDADD 137 (218)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSC-SEEEEEETTCCTTCEEEECCCSCSSS
T ss_pred EEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCC-ceEEEEECCCCCCCEEEEEEEEeCCC
Confidence 37889999999999999999999999988999999999999999999999987 78999999999999999999999998
Q ss_pred --CCCcEEEEEEeeCCCC-CCcccEEEeCCceEEEEC---ccCCccC--CCEEEEEEEEEeCC--CCCcceeEEEEEEEE
Q psy8618 81 --GSNATISYSILKGRDT-DGYGVFTIDPISGVIRTK---SVLDHED--RSIYRIAVAATDNG--FPSRQTVRLLRVEVL 150 (232)
Q Consensus 81 --~~~~~v~y~i~~~~~~-~~~~~f~id~~tG~i~~~---~~ld~e~--~~~~~l~v~a~d~~--~~~~~~~~~v~i~v~ 150 (232)
+.|+.++|+|.++.+. ...++|.|++.+|.|++. +.||||. ...|.|.|.|+|+| .|+++++++|.|+|.
T Consensus 138 ~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~ 217 (218)
T 3k5r_A 138 PATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVID 217 (218)
T ss_dssp SCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEE
T ss_pred CCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEE
Confidence 6789999999876421 123789999999999987 6899999 67999999999999 889999999999998
Q ss_pred e
Q psy8618 151 D 151 (232)
Q Consensus 151 d 151 (232)
|
T Consensus 218 D 218 (218)
T 3k5r_A 218 D 218 (218)
T ss_dssp C
T ss_pred C
Confidence 6
No 26
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=2.5e-34 Score=221.10 Aligned_cols=166 Identities=25% Similarity=0.369 Sum_probs=141.0
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeC
Q psy8618 57 VISVREEQPPG--TEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDN 134 (232)
Q Consensus 57 ~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~ 134 (232)
.+.|+|+.+.+ +.++.+ |+|+|.| ++.++|+|.++ +..++|.|++.+|.|++.+.||||....|.|.|.|+|+
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 80 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGD---GAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNR 80 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSS---SBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBS
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECC---CCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEEC
Confidence 47899998855 588888 9999998 56799999654 44568999999999999999999999999999999998
Q ss_pred C-CCCcceeEEEEEEEEecCCCCCeeeCCceEEEEEe-------------ecCCC---CCCeEEEEEEccCCCCCCcEEE
Q psy8618 135 G-FPSRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVSA-------------SDPDC---GVNAMVNYTLGESPSRTNHFYM 197 (232)
Q Consensus 135 ~-~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~~-------------~D~d~---~~~~~i~y~l~~~~~~~~~f~i 197 (232)
+ .+++++.+.|.|+|.|+|||+|.|....|.+.|.| +|+|. +.++.++|+|..+ ...|.|
T Consensus 81 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~---~~~F~I 157 (207)
T 3lnd_A 81 RTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQG---QPYFSV 157 (207)
T ss_dssp SSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEES---GGGEEE
T ss_pred CCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCC---CCCEEE
Confidence 7 46788889999999999999999999888776554 89997 6778899999874 469999
Q ss_pred ECCceEEEEe-ecCCCccccEEEEEEEEEECCcc
Q psy8618 198 KSVSGEICIS-QDLDFESRSSYEFPVVATDRGKE 230 (232)
Q Consensus 198 ~~~~G~i~~~-~~ld~e~~~~y~l~V~a~D~g~~ 230 (232)
++.+|.|++. +.||||....|.|.|.|+|+|.|
T Consensus 158 d~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~ 191 (207)
T 3lnd_A 158 ESETGIIKTALLNMDRENREQYQVVIQAKDMGGQ 191 (207)
T ss_dssp CTTTCEEEECCSSCCC--CCEEEEEEEEESGGGC
T ss_pred cCCCcEEEECcccCCcccCCEEEEEEEEEECCCC
Confidence 9999999999 89999999999999999999976
No 27
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=9.3e-33 Score=211.54 Aligned_cols=143 Identities=37% Similarity=0.461 Sum_probs=133.2
Q ss_pred eEecCCCCcCCCCeEEEEEEEEeCCCC-CceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCC-
Q psy8618 2 ISTREPLDREARSSHELVAEARDQGSP-PRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKD- 79 (232)
Q Consensus 2 i~~~~~lD~E~~~~~~l~v~a~d~~~~-~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D- 79 (232)
|.+.++||||.+..|.|+|.|+|++++ ++++.+.|+|.|.|+|||+|.|... .|.+.|+|+.++|+.|+++.|+|+|
T Consensus 55 i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~v~E~~~~gt~v~~v~A~D~D~ 133 (203)
T 3ppe_A 55 IYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQK-IFNGSVPEMSRLGTSVTKVTAEDADD 133 (203)
T ss_dssp EEESSCCCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCS-EEEEEEETTCCTTCEEEECCEECCSC
T ss_pred EEECccccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCC-ccEEEEeccCCCCcEEEEEEEEcCCC
Confidence 788999999999999999999999876 6788899999999999999999988 7899999999999999999999999
Q ss_pred --CCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEEC-ccCCccCCCEEEEEEEEEeC-CCCCcceeEEEEEEEEe
Q psy8618 80 --DGSNATISYSILKGRDTDGYGVFTIDPISGVIRTK-SVLDHEDRSIYRIAVAATDN-GFPSRQTVRLLRVEVLD 151 (232)
Q Consensus 80 --~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~-~~ld~e~~~~~~l~v~a~d~-~~~~~~~~~~v~i~v~d 151 (232)
.|.|+.++|+|..+. .+|.|+ .+|.|++. +.||||....|.|.|.|+|+ |.|++++++.|.|+|.|
T Consensus 134 ~~~g~n~~i~Y~i~~~~-----~~F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 134 PTVAGHATVTYQIIKGN-----EYFTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp TTSSSTTCEEEEEEEST-----TTEEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred cCCCCceEEEEEEeCCC-----CcEEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 477899999998763 489999 99999999 99999999999999999998 77889999999999986
No 28
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=1.3e-32 Score=211.48 Aligned_cols=145 Identities=30% Similarity=0.465 Sum_probs=128.3
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCC-CCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQG-SPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKD 79 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~-~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D 79 (232)
.|.+.++||||.+..|.|+|.|+|++ ++++++.+.|+|.|.|+|||+|.|... .|.+.|+|+.++|+.++++.|+|+|
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~-~y~~~v~E~~~~gt~v~~v~A~D~D 134 (207)
T 3lnd_A 56 DIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKD-VYTATVPEMADVGTFVVQVTATDAD 134 (207)
T ss_dssp EEEECSCCCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCS-EEEEEEESSCCTTCEEEECCEECSS
T ss_pred EEEECCCcCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCC-ceEEEEeCCCCCCCEEEEEEEEeCC
Confidence 37889999999999999999999987 467888999999999999999999987 7899999999999999999999999
Q ss_pred C---CCCcEEEEEEeeCCCCCCcccEEEeCCceEEEEC-ccCCccCCCEEEEEEEEEeCCCC--CcceeEEEEEEEEe
Q psy8618 80 D---GSNATISYSILKGRDTDGYGVFTIDPISGVIRTK-SVLDHEDRSIYRIAVAATDNGFP--SRQTVRLLRVEVLD 151 (232)
Q Consensus 80 ~---~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~-~~ld~e~~~~~~l~v~a~d~~~~--~~~~~~~v~i~v~d 151 (232)
. |.|+.++|+|..+ ..+|.|++.+|.|++. +.||||....|.|.|.|+|+|.+ +++++++|.|+|.|
T Consensus 135 ~~~~g~n~~i~Y~i~~~-----~~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 135 DPTYGNSAKVVYSILQG-----QPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp CTTSSSTTCCEEEEEES-----GGGEEECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred CCCCCCCcEEEEEEcCC-----CCCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 8 7888999999865 3489999999999999 99999999999999999999876 78999999999986
No 29
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.97 E-value=8.8e-32 Score=189.02 Aligned_cols=118 Identities=28% Similarity=0.401 Sum_probs=109.3
Q ss_pred EEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccC
Q psy8618 38 ISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVL 117 (232)
Q Consensus 38 v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~l 117 (232)
++|.|+|||+|.|.+. .|.+.|+|+.++|+.|+++.|+|+|.|.++.++|+|..+.. ....+|.|++.+|.|++.+.|
T Consensus 2 ~~V~DvNDn~P~F~~~-~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~-~~~~~F~Id~~tG~I~~~~~L 79 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKS-VYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATE-SVRRLLRLDETSGWLSVLHRI 79 (119)
T ss_dssp CCCCCSCCCCCCCSSS-EEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCT-THHHHEEECTTTCEEEECSCC
T ss_pred CeEecCCCCCCCcCCC-cEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCC-ccccEEEEeCCceEEEECccC
Confidence 4689999999999998 78999999999999999999999999999999999976421 125799999999999999999
Q ss_pred CccCCCEEEEEEEEEeCCCCCcceeEEEEEEEEecCCCCC
Q psy8618 118 DHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVLDLNDNRP 157 (232)
Q Consensus 118 d~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P 157 (232)
|||....|.|.|.|+|+|.|++++++.|.|+|.|+|||+|
T Consensus 80 D~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 80 DREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp CTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred CcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 9999999999999999999999999999999999999998
No 30
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.97 E-value=3.9e-31 Score=215.81 Aligned_cols=167 Identities=26% Similarity=0.365 Sum_probs=148.0
Q ss_pred EEEEecC--CCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeC
Q psy8618 57 VISVREE--QPPGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDN 134 (232)
Q Consensus 57 ~~~v~E~--~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~ 134 (232)
.+.+.|+ .+.|+.|+++. +|+|.+ ++.++|+|.++ ....+|.|++.+|.|++.+.||||....|.|.|.|+|+
T Consensus 6 ~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 80 (322)
T 2a62_A 6 QMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGD---GAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDF 80 (322)
T ss_dssp CEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEET---TBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECT
T ss_pred eeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECC---CCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEEC
Confidence 5789999 88999999985 899987 57899999754 45578999999999999999999999999999999998
Q ss_pred CC-CCcceeEEEEEEEEecCCCCCeeeCCceEEEEEe-------------ecCCC---CCCeEEEEEEccCCCCCCcEEE
Q psy8618 135 GF-PSRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVSA-------------SDPDC---GVNAMVNYTLGESPSRTNHFYM 197 (232)
Q Consensus 135 ~~-~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~~-------------~D~d~---~~~~~i~y~l~~~~~~~~~f~i 197 (232)
+. +++++.+.|.|+|.|+|||+|.|....|.++|.| +|+|. +.++.++|+|..+ ...|.|
T Consensus 81 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~---~~~F~I 157 (322)
T 2a62_A 81 ETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEG---QPYFSI 157 (322)
T ss_dssp TTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEEC---TTTEEE
T ss_pred CCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccC---CCCEEE
Confidence 75 3577888999999999999999999998887765 78885 5678999999875 468999
Q ss_pred ECCceEEEEe-ecCCCccccEEEEEEEEEECCccC
Q psy8618 198 KSVSGEICIS-QDLDFESRSSYEFPVVATDRGKET 231 (232)
Q Consensus 198 ~~~~G~i~~~-~~ld~e~~~~y~l~V~a~D~g~~~ 231 (232)
++.+|.|.+. +.||||....|.|.|.|+|+|.|+
T Consensus 158 d~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~ 192 (322)
T 2a62_A 158 EPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHS 192 (322)
T ss_dssp CTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSS
T ss_pred ecCCCEEEecccCCCcccCCeEEEEEEEEECCCCC
Confidence 9999999998 899999999999999999999874
No 31
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.97 E-value=1.2e-29 Score=207.08 Aligned_cols=145 Identities=28% Similarity=0.412 Sum_probs=126.9
Q ss_pred eEecCCCCcCCCCeEEEEEEEEeCCC----CCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEe
Q psy8618 2 ISTREPLDREARSSHELVAEARDQGS----PPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVD 77 (232)
Q Consensus 2 i~~~~~lD~E~~~~~~l~v~a~d~~~----~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D 77 (232)
|.+.++||||....|.|+|.|+|+|+ +++++.+.++|.|.| |||+|.|... .|.+.|+|+.++|+.|+++.|+|
T Consensus 163 i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~-~y~~~v~En~~~gt~v~~v~A~D 240 (316)
T 3ubf_A 163 VRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMP-SYEAEIPENQKKDSDIISIKAKS 240 (316)
T ss_dssp EEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSS-SEEEEEETTCCTTCEEEECCEEC
T ss_pred EEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCC-CceEEEeCCCCCCCEEEEEEEEe
Confidence 78899999999999999999999885 357788899999999 9999999988 78999999999999999999999
Q ss_pred CCCCCCcEEEEEEe-eCCCCCCcccEEEeCCceEEEECccCCccCC---CEEEEEEEEEe-CCCCCcceeEEEEEEEEec
Q psy8618 78 KDDGSNATISYSIL-KGRDTDGYGVFTIDPISGVIRTKSVLDHEDR---SIYRIAVAATD-NGFPSRQTVRLLRVEVLDL 152 (232)
Q Consensus 78 ~D~~~~~~v~y~i~-~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~---~~~~l~v~a~d-~~~~~~~~~~~v~i~v~d~ 152 (232)
+| ++.++|+|. .+ +..++|.|++.+|.|++.+.||||.. ..|.|.|.|+| ++ ++++.+.|.|+|.|+
T Consensus 241 ~D---n~~i~Y~i~~~~---~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~dd~g--~~~~~~~v~I~V~Dv 312 (316)
T 3ubf_A 241 FA---DREIRYTLKAQG---QGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSG--GFSTSVDLTIRVTDV 312 (316)
T ss_dssp TT---CCCEEEEEEEES---SCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEESSS--SCEEEEEEEEEEECC
T ss_pred CC---CCEEEEEEEcCC---CCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEEECCC--CCEEEEEEEEEEEec
Confidence 98 567999997 44 56789999999999999999999987 79999999995 44 578899999999999
Q ss_pred CCCC
Q psy8618 153 NDNR 156 (232)
Q Consensus 153 Nd~~ 156 (232)
|||+
T Consensus 313 NDn~ 316 (316)
T 3ubf_A 313 NDNA 316 (316)
T ss_dssp ----
T ss_pred CCCC
Confidence 9986
No 32
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=1.8e-29 Score=197.71 Aligned_cols=173 Identities=24% Similarity=0.361 Sum_probs=140.3
Q ss_pred ceEEEEecCCCCCcEEEEEEE-EeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEEC---ccCCccCCCEEEEEEE
Q psy8618 55 EDVISVREEQPPGTEVVRARA-VDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTK---SVLDHEDRSIYRIAVA 130 (232)
Q Consensus 55 ~~~~~v~E~~~~g~~v~~v~a-~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~---~~ld~e~~~~~~l~v~ 130 (232)
.+.+.|+|+++.|+.+..+.+ .|.|.+.++.++|+|.. ....+|.|++.+|.+.+. +.||||....|.+.+.
T Consensus 21 ~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~----~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~ 96 (242)
T 4apx_B 21 ATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKD----NVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVV 96 (242)
T ss_dssp SEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEES----CGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEE
T ss_pred eEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEec----CCCceEEECCCCCEEEEEecCCceeccCCCceEEEEE
Confidence 467899999999999887555 44555778889999954 456789999999999875 6699998776665555
Q ss_pred EEeCCCC--CcceeEEEEEEEEecCCCCCeeeCCceEEEEE------------------eecCCCCCCeEEEEEEccCCC
Q psy8618 131 ATDNGFP--SRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVS------------------ASDPDCGVNAMVNYTLGESPS 190 (232)
Q Consensus 131 a~d~~~~--~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~------------------~~D~d~~~~~~i~y~l~~~~~ 190 (232)
+.+++.+ +..+.+.|.|.|.|+|||+|.|....|.++|. |+|+|.+.++.|+|+|..+..
T Consensus 97 ~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~ 176 (242)
T 4apx_B 97 QVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPE 176 (242)
T ss_dssp EEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTT
T ss_pred EEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCC
Confidence 5443322 44566789999999999999999999987766 468898889999999987522
Q ss_pred C---CCcEEEEC-CceEEEEeecCCCccccEEEEEEEEEECCccC
Q psy8618 191 R---TNHFYMKS-VSGEICISQDLDFESRSSYEFPVVATDRGKET 231 (232)
Q Consensus 191 ~---~~~f~i~~-~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~~~ 231 (232)
. ...|.|+. .+|.|++.++||||....|.|.|.|+|+|.|+
T Consensus 177 ~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~ 221 (242)
T 4apx_B 177 DPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNL 221 (242)
T ss_dssp STTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSG
T ss_pred CcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCc
Confidence 1 34699985 59999999999999999999999999999885
No 33
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.96 E-value=2.3e-29 Score=175.16 Aligned_cols=113 Identities=28% Similarity=0.414 Sum_probs=102.9
Q ss_pred EEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccC
Q psy8618 38 ISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVL 117 (232)
Q Consensus 38 v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~l 117 (232)
|.|.|+|||+|.|.+. .|.+.|+|+.++|+.|+++.|+|+|.|.++.++|+|..+.+.....+|.|++.+|.|++.++|
T Consensus 2 ~~V~DvNDn~P~F~~~-~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~L 80 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEG-QVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSL 80 (114)
T ss_dssp CCCCCCCCCCCCCSCS-EEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCC
T ss_pred CeEeeCCCCCCCcCCC-cEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccC
Confidence 4689999999999998 789999999999999999999999999999999999753222456899999999999999999
Q ss_pred CccCCCEEEEEEEEEeCCCCCcceeEEEEEEEEecC
Q psy8618 118 DHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVLDLN 153 (232)
Q Consensus 118 d~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~N 153 (232)
|||....|.|.|.|+|++.++ ++++|.|+|.|+|
T Consensus 81 D~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 81 DREETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp CTTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred CcccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 999999999999999998765 7789999999997
No 34
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.95 E-value=1.1e-27 Score=187.52 Aligned_cols=146 Identities=26% Similarity=0.336 Sum_probs=121.4
Q ss_pred cCCCCcCCCCeEEEEEEEEeCCC--CCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEE-----EEEEe
Q psy8618 5 REPLDREARSSHELVAEARDQGS--PPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVR-----ARAVD 77 (232)
Q Consensus 5 ~~~lD~E~~~~~~l~v~a~d~~~--~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~-----v~a~D 77 (232)
.+.||||....|.+.+.+.+.+. ....+.+.|+|.|.|+|||+|.|.+. .|.+.|+|+.++|+.|.+ +.|+|
T Consensus 80 ~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~-~y~~~v~En~~~Gt~v~~~~~~~v~A~D 158 (242)
T 4apx_B 80 GRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHE-SYYATVNELTPVGTTIFTGFSGDNGATD 158 (242)
T ss_dssp TSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSS-CEEEEEETTCCTTCEEECTTTTTTSEEC
T ss_pred CCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccce-eeeeEeeeccCCCCEEEEeeeccccccc
Confidence 47899999877665555544322 24566788999999999999999988 789999999999999976 77999
Q ss_pred CCCCCCcEEEEEEeeCCCC-CCcccEEEeC-CceEEEECccCCccCCCEEEEEEEEEeCCCCC---cceeEEEEEEEEe
Q psy8618 78 KDDGSNATISYSILKGRDT-DGYGVFTIDP-ISGVIRTKSVLDHEDRSIYRIAVAATDNGFPS---RQTVRLLRVEVLD 151 (232)
Q Consensus 78 ~D~~~~~~v~y~i~~~~~~-~~~~~f~id~-~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~~~---~~~~~~v~i~v~d 151 (232)
+|.|.|+.++|+|..+... .....|.|++ .+|.|++.+.||||....|.|.|.|+|+|.|+ +++.+.|+|+|..
T Consensus 159 ~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 159 IDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp CSSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred CCCCcCCceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 9999999999999876421 2346799995 58999999999999999999999999999874 6677888888875
No 35
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=1.6e-25 Score=157.67 Aligned_cols=117 Identities=21% Similarity=0.329 Sum_probs=104.4
Q ss_pred CCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCC-CCCcccEEEeCCceEEEECccCCccC
Q psy8618 43 VNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRD-TDGYGVFTIDPISGVIRTKSVLDHED 121 (232)
Q Consensus 43 vNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~-~~~~~~f~id~~tG~i~~~~~ld~e~ 121 (232)
.+.+.|.|..+ .+.+.+.|+.++|+.|+++. +|.|.+.|+.++|+|.++.. ....++|.|++.+|.|++.+.||||.
T Consensus 5 ~~r~~p~f~~~-~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 82 (123)
T 2yqg_A 5 SSGQKRAWITA-PVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREE 82 (123)
T ss_dssp SSCSCCSSCCC-CEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTT
T ss_pred ccccCCccCCC-CEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCccc
Confidence 36789999988 67788888889999999999 69998889999999976521 12457899999999999999999999
Q ss_pred CCEEEEEEEEEeCCCCCcceeEEEEEEEEecCCCCCeeeC
Q psy8618 122 RSIYRIAVAATDNGFPSRQTVRLLRVEVLDLNDNRPTFTS 161 (232)
Q Consensus 122 ~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~ 161 (232)
...|.|.|.|+|++.|++++.+.|.|+|.|+|||+|.|.+
T Consensus 83 ~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 83 TPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp BSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred CceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 9999999999999999899999999999999999999975
No 36
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.89 E-value=2.5e-23 Score=143.60 Aligned_cols=102 Identities=27% Similarity=0.387 Sum_probs=80.9
Q ss_pred ceEEEEecCCCCCcE--EEEEEEEeCCCCCCcEEEEEEeeCC-CCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEE
Q psy8618 55 EDVISVREEQPPGTE--VVRARAVDKDDGSNATISYSILKGR-DTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAA 131 (232)
Q Consensus 55 ~~~~~v~E~~~~g~~--v~~v~a~D~D~~~~~~v~y~i~~~~-~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a 131 (232)
.|.+.|+|+++.|+. ++++ |.|.+.++.++|+|..+. ..+..++|.|++.+|.|++.++||||....|.|.|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 82 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHA 82 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEE
Confidence 357999999999994 5554 677778999999997531 1245679999999999999999999999999999999
Q ss_pred EeCCCCCcceeEEEEEEEEecCCCCCee
Q psy8618 132 TDNGFPSRQTVRLLRVEVLDLNDNRPTF 159 (232)
Q Consensus 132 ~d~~~~~~~~~~~v~i~v~d~Nd~~P~f 159 (232)
+|++.|++++.+.|.|+|.|+|||+|.|
T Consensus 83 ~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 83 VDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp ECTTSCBCSCCEEEEEEEC---------
T ss_pred EECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 9999999999999999999999999987
No 37
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=2.2e-22 Score=141.62 Aligned_cols=105 Identities=20% Similarity=0.156 Sum_probs=90.2
Q ss_pred ceEEEEecCCCCCcEEEEEEEEeCCCCCCcEE---EEEEeeCCCCCCcccEEEeCCceEEEECccCCccCC----CEEEE
Q psy8618 55 EDVISVREEQPPGTEVVRARAVDKDDGSNATI---SYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDR----SIYRI 127 (232)
Q Consensus 55 ~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v---~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~----~~~~l 127 (232)
.+.+.|+|+.++|+.|+++ |+|.|.+. +.+ +|+|+++ +...+|.|++.+|.|++.+.||||.. ..|.|
T Consensus 12 ~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~---~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l 86 (125)
T 1wyj_A 12 TITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSK---GNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCIL 86 (125)
T ss_dssp CCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECS---SSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCB
T ss_pred eEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecC---CCCCeEEEECCccEEEECccccchhhcccCCcEEE
Confidence 4568999999999999999 99988654 234 8999876 55679999999999999999999998 89999
Q ss_pred EEEEEeCCCCCcceeEEEEEEEEecCCCCCeeeCCceEEE
Q psy8618 128 AVAATDNGFPSRQTVRLLRVEVLDLNDNRPTFTSSSLLFK 167 (232)
Q Consensus 128 ~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~ 167 (232)
.|.|.+.. +. ..+.|.|+|.|+|||+|.|....|.++
T Consensus 87 ~v~a~~~~--p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 87 HFQVLLKS--PV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CCEEEETT--TT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEECC--CC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 99999743 33 478899999999999999999887654
No 38
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.83 E-value=4.7e-20 Score=124.32 Aligned_cols=91 Identities=27% Similarity=0.302 Sum_probs=82.6
Q ss_pred eEEEEecCCC--CCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe
Q psy8618 56 DVISVREEQP--PGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD 133 (232)
Q Consensus 56 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d 133 (232)
+.+.|+|+.+ .|+.|+++. +|+|.| |+.++|+|..+ ...+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 80 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGE---GAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALD 80 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEET---TBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCC---CCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEE
Confidence 4689999976 689999999 999999 99999999764 4447899999999999999999999999999999999
Q ss_pred CC-CCCcceeEEEEEEEEe
Q psy8618 134 NG-FPSRQTVRLLRVEVLD 151 (232)
Q Consensus 134 ~~-~~~~~~~~~v~i~v~d 151 (232)
.| .|++++.+.|.|+|.|
T Consensus 81 ~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 81 RRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TTTCCBSSCCEEEEEEEEC
T ss_pred CCCCCCcceeEEEEEEEeC
Confidence 99 4889999999999986
No 39
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.83 E-value=5.4e-20 Score=123.86 Aligned_cols=91 Identities=25% Similarity=0.309 Sum_probs=80.2
Q ss_pred eEEEEecCCC--CCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe
Q psy8618 56 DVISVREEQP--PGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD 133 (232)
Q Consensus 56 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d 133 (232)
+.+.|+|+.+ .|+.|+++. +|+|.| |+.++|+|..+ ...++|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 79 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGD---GAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVD 79 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEET---TBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCC---CCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEE
Confidence 4689999995 899999997 999999 99999999654 3456899999999999999999999999999999999
Q ss_pred CCC-CCcceeEEEEEEEEe
Q psy8618 134 NGF-PSRQTVRLLRVEVLD 151 (232)
Q Consensus 134 ~~~-~~~~~~~~v~i~v~d 151 (232)
+|. |++++.+.|.|+|.|
T Consensus 80 ~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 80 FETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TTTCCBSSCCEEEEEEECC
T ss_pred CCCCCCcceeEEEEEEEEC
Confidence 997 788999999999875
No 40
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.80 E-value=3.2e-19 Score=120.44 Aligned_cols=91 Identities=25% Similarity=0.278 Sum_probs=81.7
Q ss_pred EEEEecCCCC--CcEEEEEEEEeCCCCCCcEEEEEEeeC-CCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe
Q psy8618 57 VISVREEQPP--GTEVVRARAVDKDDGSNATISYSILKG-RDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD 133 (232)
Q Consensus 57 ~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~v~y~i~~~-~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d 133 (232)
.+.|+||.+. |+.|+++.|+|+|. .++|+|... ...+..+.|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 6 ~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 81 (99)
T 3k6d_A 6 SISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTD 81 (99)
T ss_dssp CEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEE
Confidence 5899999999 99999999999996 589999642 1224568999999999999999999999999999999999
Q ss_pred CCCCCcceeEEEEEEEEe
Q psy8618 134 NGFPSRQTVRLLRVEVLD 151 (232)
Q Consensus 134 ~~~~~~~~~~~v~i~v~d 151 (232)
+|.+++++.+.|.|+|.|
T Consensus 82 ~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 82 ENGKTIEGPVDLEILVID 99 (99)
T ss_dssp TTCCEEEEEEEEEEEEEC
T ss_pred CCCCceeeEEEEEEEEEC
Confidence 999999999999999986
No 41
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.79 E-value=1.1e-18 Score=118.09 Aligned_cols=91 Identities=24% Similarity=0.316 Sum_probs=81.1
Q ss_pred EEEEecCCCC--CcEEEEEEEEeCCCCCCcEEEEEEeeC-CCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe
Q psy8618 57 VISVREEQPP--GTEVVRARAVDKDDGSNATISYSILKG-RDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD 133 (232)
Q Consensus 57 ~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~v~y~i~~~-~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d 133 (232)
.+.|+||.+. |+.|++|.|+|+|. .++|+|... ...+..+.|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 82 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence 4899999998 89999999999996 489999643 1123467899999999999999999999999999999999
Q ss_pred CCCCCcceeEEEEEEEEe
Q psy8618 134 NGFPSRQTVRLLRVEVLD 151 (232)
Q Consensus 134 ~~~~~~~~~~~v~i~v~d 151 (232)
+|.|++++.+.|.|+|.|
T Consensus 83 ~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 83 ASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp TTCCEEEEEEEEEEEEEC
T ss_pred CCCCcccceEEEEEEEEC
Confidence 999999999999999986
No 42
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.78 E-value=1.9e-18 Score=116.72 Aligned_cols=91 Identities=25% Similarity=0.315 Sum_probs=80.9
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCCCcEEEEEEeeC-CCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe
Q psy8618 57 VISVREEQPPG--TEVVRARAVDKDDGSNATISYSILKG-RDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD 133 (232)
Q Consensus 57 ~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~v~y~i~~~-~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d 133 (232)
.+.|+||.+.| +.|++|.|+|+|. .++|+|... ...+..+.|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 81 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD 81 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence 48999999987 8999999999996 699999642 1123457999999999999999999999999999999999
Q ss_pred CCCCCcceeEEEEEEEEe
Q psy8618 134 NGFPSRQTVRLLRVEVLD 151 (232)
Q Consensus 134 ~~~~~~~~~~~v~i~v~d 151 (232)
.|.|++++.+.|.|+|.|
T Consensus 82 ~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 82 LSGKIIDGPVRLDISVID 99 (99)
T ss_dssp TTSCEEEEEEEEEEEEEC
T ss_pred CCCCceeeeEEEEEEEEC
Confidence 999999999999999986
No 43
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.77 E-value=1.5e-18 Score=118.40 Aligned_cols=93 Identities=23% Similarity=0.280 Sum_probs=79.9
Q ss_pred EEEEecCCC--CCcEEEEEEEEeCCCCCCcEEEEEEeeCCC-CCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEe
Q psy8618 57 VISVREEQP--PGTEVVRARAVDKDDGSNATISYSILKGRD-TDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATD 133 (232)
Q Consensus 57 ~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~-~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d 133 (232)
.+.|+|+.+ .|+.|+++.| |. +.|+.++|+|..+.. ....++|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d~--g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-NK--DKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-GG--GGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEEC-CC--CCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 478999999 5889999999 33 478999999976521 11246899999999999999999999999999999999
Q ss_pred CCCCCcceeEEEEEEEEec
Q psy8618 134 NGFPSRQTVRLLRVEVLDL 152 (232)
Q Consensus 134 ~~~~~~~~~~~v~i~v~d~ 152 (232)
.|.|++++.+.|.|+|.|+
T Consensus 87 ~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 87 SNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp TTSCBSSCCEEEEEEEEC-
T ss_pred CCCCceeeEEEEEEEEEeC
Confidence 9999999999999999985
No 44
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1e-19 Score=126.23 Aligned_cols=85 Identities=26% Similarity=0.420 Sum_probs=74.3
Q ss_pred EEEEecCCCCCeeeCCceEEEEEe-------------ecCCCCCCeEEEEEEccCC--CCCCcEEEECCceEEEEeecCC
Q psy8618 147 VEVLDLNDNRPTFTSSSLLFKVSA-------------SDPDCGVNAMVNYTLGESP--SRTNHFYMKSVSGEICISQDLD 211 (232)
Q Consensus 147 i~v~d~Nd~~P~f~~~~~~~~v~~-------------~D~d~~~~~~i~y~l~~~~--~~~~~f~i~~~~G~i~~~~~ld 211 (232)
|.|.|+|||+|.|....|.++|.| +|+|.+.++.|+|+|.... +....|.|++.+|.|++.++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 468999999999999988776665 8889888889999998521 3457899999999999999999
Q ss_pred CccccEEEEEEEEEECCccC
Q psy8618 212 FESRSSYEFPVVATDRGKET 231 (232)
Q Consensus 212 ~e~~~~y~l~V~a~D~g~~~ 231 (232)
||....|.|.|.|+|+|.|+
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~ 101 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTP 101 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSC
T ss_pred cccCcEEEEEEEEEECCCCc
Confidence 99999999999999999874
No 45
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=3.1e-19 Score=124.89 Aligned_cols=85 Identities=27% Similarity=0.422 Sum_probs=74.2
Q ss_pred EEEEecCCCCCeeeCCceEEEEEe-------------ecCCCCCCeEEEEEEccCCC-CCCcEEEECCceEEEEeecCCC
Q psy8618 147 VEVLDLNDNRPTFTSSSLLFKVSA-------------SDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICISQDLDF 212 (232)
Q Consensus 147 i~v~d~Nd~~P~f~~~~~~~~v~~-------------~D~d~~~~~~i~y~l~~~~~-~~~~f~i~~~~G~i~~~~~ld~ 212 (232)
++|.|+|||+|.|....|.++|.| +|+|.+.++.|+|+|..+.. ....|.|++.+|.|++.++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 468999999999999988776665 78888888899999987521 1468999999999999999999
Q ss_pred ccccEEEEEEEEEECCccC
Q psy8618 213 ESRSSYEFPVVATDRGKET 231 (232)
Q Consensus 213 e~~~~y~l~V~a~D~g~~~ 231 (232)
|....|.|.|.|+|+|.|+
T Consensus 82 E~~~~y~l~V~A~D~g~p~ 100 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPP 100 (119)
T ss_dssp TTCSEEEEEEEECCSBTTB
T ss_pred ccCCEEEEEEEEEECCCCC
Confidence 9999999999999999875
No 46
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.62 E-value=8.3e-17 Score=109.32 Aligned_cols=94 Identities=26% Similarity=0.261 Sum_probs=73.7
Q ss_pred ceEEEEecCCCCCcEEEEEEEEeCCCCCC--cEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCC----CEEEEE
Q psy8618 55 EDVISVREEQPPGTEVVRARAVDKDDGSN--ATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDR----SIYRIA 128 (232)
Q Consensus 55 ~~~~~v~E~~~~g~~v~~v~a~D~D~~~~--~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~----~~~~l~ 128 (232)
.+.+.|+|+.++|+.|+++ |.|.|.+.+ ..++|+|.++ +...+|.|++.||.|++.+.||||.. ..|.+.
T Consensus 4 ~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~---~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~ 79 (103)
T 1wuz_A 4 QIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASK---DRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIH 79 (103)
T ss_dssp EEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCS---SCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEE
T ss_pred eEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeC---CCccEEEEECCeEEEEECCcCccccccCCCCcEEEE
Confidence 4678999999999999999 999885422 3578999776 55789999999999999999999975 233444
Q ss_pred EEEEeCCCCCcceeEEEEEEEEecCCC
Q psy8618 129 VAATDNGFPSRQTVRLLRVEVLDLNDN 155 (232)
Q Consensus 129 v~a~d~~~~~~~~~~~v~i~v~d~Nd~ 155 (232)
+.+... .| . ..+.|.|+|.|+|||
T Consensus 80 ~~v~~~-~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 80 LEVIVD-RP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEEET-TT-T-EEEEEEEEEECCSCC
T ss_pred EEEEEC-CC-C-EEEEEEEEEEEcCCC
Confidence 444433 23 2 378899999999997
No 47
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.48 E-value=1.1e-13 Score=93.09 Aligned_cols=66 Identities=30% Similarity=0.399 Sum_probs=59.0
Q ss_pred ceEEEEEeecCCCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCccccEEEEEEEEEECCc-cC
Q psy8618 163 SLLFKVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESRSSYEFPVVATDRGK-ET 231 (232)
Q Consensus 163 ~~~~~v~~~D~d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~-~~ 231 (232)
...++|. +|+|.+ |+.|+|+|.++ +....|.|++.+|.|++.++||||....|.|.|.|+|+|. |+
T Consensus 20 ~~v~~v~-~D~D~g-Ng~v~Ysi~~~-~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~ 86 (99)
T 1zvn_A 20 LYVGKLH-SDMDRG-DGSIKYILSGE-GAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTGRP 86 (99)
T ss_dssp EEEEECC-BTTCCS-SSCEEEEEEET-TBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCB
T ss_pred cEEEEEE-ECCCCC-CCEEEEEEeCC-CCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCCCCC
Confidence 4577888 999999 99999999874 4457899999999999999999999999999999999994 64
No 48
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.48 E-value=1.2e-13 Score=92.72 Aligned_cols=64 Identities=23% Similarity=0.395 Sum_probs=55.4
Q ss_pred ceEEEEEeecCCCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCccccEEEEEEEEEECCc
Q psy8618 163 SLLFKVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESRSSYEFPVVATDRGK 229 (232)
Q Consensus 163 ~~~~~v~~~D~d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~ 229 (232)
...+.|. +|+|.+ |+.|+|+|.++ +....|.|++.+|.|++.++||||....|.|.|.|+|+|.
T Consensus 19 ~~v~~v~-~D~D~g-N~~v~Ysi~~~-~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~ 82 (98)
T 1zxk_A 19 ILVGRLH-TDLDPG-SKKIKYILSGD-GAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET 82 (98)
T ss_dssp EEEEECC-BCCCCC---CEEEEEEET-TBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred eEEEEEE-ECCCCC-CCEEEEEEeCC-CCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCC
Confidence 4567776 999999 99999999874 4456899999999999999999999999999999999997
No 49
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=1.6e-13 Score=96.10 Aligned_cols=52 Identities=29% Similarity=0.379 Sum_probs=49.1
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecC
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVD 52 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~ 52 (232)
.|.++++||||.+..|.|+|.|+|+|.|++++.+.|.|.|.|+|||+|.|.+
T Consensus 71 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 71 ELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp EEEECSCCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred EEEECcccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 3788999999999999999999999998899999999999999999999975
No 50
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.41 E-value=1.7e-13 Score=94.12 Aligned_cols=50 Identities=36% Similarity=0.527 Sum_probs=38.9
Q ss_pred CeEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCee
Q psy8618 1 EISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPEL 50 (232)
Q Consensus 1 ~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f 50 (232)
.|.++++||||.+..|.|+|.|+|+|+|++++.+.|+|.|+|+|||+|.|
T Consensus 61 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 61 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEECCcCCcccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 37889999999999999999999999988999999999999999999987
No 51
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.34 E-value=3.1e-12 Score=86.04 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=58.0
Q ss_pred CceEEEEEeecCCCCCCeEEEEEEccC---CCCCCcEEEECCceEEEEeecCCCccccEEEEEEEEEECCccC
Q psy8618 162 SSLLFKVSASDPDCGVNAMVNYTLGES---PSRTNHFYMKSVSGEICISQDLDFESRSSYEFPVVATDRGKET 231 (232)
Q Consensus 162 ~~~~~~v~~~D~d~~~~~~i~y~l~~~---~~~~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~~~ 231 (232)
+.+.++|.|+|+|. .|+|+|.+. .+..+.|.|++.+|.|++.++||||....|.|.|.|+|+|.|+
T Consensus 18 ~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~ 86 (99)
T 3k6i_A 18 PRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLSGKI 86 (99)
T ss_dssp CEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETTSCE
T ss_pred CeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEECCCCc
Confidence 35688999999997 789999853 1345799999999999999999999999999999999999875
No 52
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.33 E-value=1.8e-12 Score=88.09 Aligned_cols=66 Identities=15% Similarity=0.226 Sum_probs=56.6
Q ss_pred eEEEEEeecCCCCCCeEEEEEEccCCCC---CCcEEEECCceEEEEeecCCCccccEEEEEEEEEECCccCC
Q psy8618 164 LLFKVSASDPDCGVNAMVNYTLGESPSR---TNHFYMKSVSGEICISQDLDFESRSSYEFPVVATDRGKETQ 232 (232)
Q Consensus 164 ~~~~v~~~D~d~~~~~~i~y~l~~~~~~---~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~~~q 232 (232)
..++|.+ |.+.|+.|+|+|.++... .+.|.|++.+|.|++.++||||....|.|.|.|+|+|.|++
T Consensus 24 ~v~~v~A---d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g~p~~ 92 (105)
T 2omz_B 24 NLVQIKS---NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAV 92 (105)
T ss_dssp EEEECEE---GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTSCBS
T ss_pred EEEEEEC---CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEECCCCce
Confidence 5678888 556789999999875211 46899999999999999999999999999999999998863
No 53
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.31 E-value=3.1e-12 Score=86.16 Aligned_cols=66 Identities=23% Similarity=0.296 Sum_probs=57.7
Q ss_pred CceEEEEEeecCCCCCCeEEEEEEccC---CCCCCcEEEECCceEEEEeecCCCccccEEEEEEEEEECCccC
Q psy8618 162 SSLLFKVSASDPDCGVNAMVNYTLGES---PSRTNHFYMKSVSGEICISQDLDFESRSSYEFPVVATDRGKET 231 (232)
Q Consensus 162 ~~~~~~v~~~D~d~~~~~~i~y~l~~~---~~~~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~~~ 231 (232)
..+.++|.|+|+|. .|+|+|.+. .+....|.|++.+|.|++.++||||....|.|.|.|+|+|.|+
T Consensus 19 g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~ 87 (100)
T 3k6f_A 19 PRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKT 87 (100)
T ss_dssp CEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTTCCE
T ss_pred CcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEECCCCc
Confidence 45678999999997 579999752 2345899999999999999999999999999999999999875
No 54
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.29 E-value=3.9e-12 Score=85.51 Aligned_cols=66 Identities=26% Similarity=0.297 Sum_probs=57.4
Q ss_pred CceEEEEEeecCCCCCCeEEEEEEccC---CCCCCcEEEECCceEEEEeecCCCccccEEEEEEEEEECCccC
Q psy8618 162 SSLLFKVSASDPDCGVNAMVNYTLGES---PSRTNHFYMKSVSGEICISQDLDFESRSSYEFPVVATDRGKET 231 (232)
Q Consensus 162 ~~~~~~v~~~D~d~~~~~~i~y~l~~~---~~~~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~~~ 231 (232)
....++|.++|+|. .|+|+|.+. .+..+.|.|++.+|.|++.++||||....|.|.|.|+|+|.|+
T Consensus 18 g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~~~ 86 (99)
T 3k6d_A 18 PKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTDENGKT 86 (99)
T ss_dssp SEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTCCE
T ss_pred CcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEECCCCc
Confidence 34578899998887 689999752 2456899999999999999999999999999999999999875
No 55
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.07 E-value=3e-11 Score=84.62 Aligned_cols=53 Identities=30% Similarity=0.372 Sum_probs=45.3
Q ss_pred eEecCCCCcCCC----CeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEE
Q psy8618 2 ISTREPLDREAR----SSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVI 58 (232)
Q Consensus 2 i~~~~~lD~E~~----~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~ 58 (232)
|.++++||||+. ..|.|++.|.+.. +. ..+.|.|.|+|+|||+|.|..+ .|.+
T Consensus 66 i~~~~~LDRE~~c~~~~~y~l~v~a~~~~--p~-~~~~V~I~V~DvNDN~P~F~~~-~y~v 122 (125)
T 1wyj_A 66 LLLKEKLDREELCGSTNPCILHFQVLLKS--PV-QFIQGEIQLQDVNDHAPEFMED-ESGP 122 (125)
T ss_dssp EEESSCCCSTTTCTTCSSCCBCCEEEETT--TT-EEECCCEEECCCCCCCCCCCCC-CCCC
T ss_pred EEECccccchhhcccCCcEEEEEEEEECC--CC-eEEEEEEEEEEccCCCCcCCCc-EEEE
Confidence 788999999999 9999999999743 33 4789999999999999999987 5543
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=98.16 E-value=1.7e-06 Score=58.17 Aligned_cols=58 Identities=14% Similarity=0.214 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCC--eEEEEEEccCCCCCCcEEEECCceEEEEeecCCCcccc------EEEEEEEE
Q psy8618 165 LFKVSASDPDCGVN--AMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESRS------SYEFPVVA 224 (232)
Q Consensus 165 ~~~v~~~D~d~~~~--~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~~------~y~l~V~a 224 (232)
+..| +.|+|...+ +.+.|+|..+ +..++|.|++.+|.|.+.++||||... .|.+.|.+
T Consensus 19 Vg~v-a~D~~~~~~~~~~~~y~i~~~-~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v~~ 84 (103)
T 1wuz_A 19 VGRI-AQDLGLELTELVPRLFRVASK-DRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIV 84 (103)
T ss_dssp CCCH-HHHHTCCHHHHTTTTBCCBCS-SCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEEEE
T ss_pred EEEE-EeccCCCCcccccEEEEEEeC-CCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEEEEE
Confidence 4445 455544321 2457999865 567899999999999999999999752 45555554
No 57
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=95.04 E-value=0.71 Score=33.98 Aligned_cols=116 Identities=16% Similarity=0.072 Sum_probs=61.1
Q ss_pred CCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCC---CC-cEEEEEEEEeCCCCCCcEEEE
Q psy8618 13 RSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQP---PG-TEVVRARAVDKDDGSNATISY 88 (232)
Q Consensus 13 ~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~---~g-~~v~~v~a~D~D~~~~~~v~y 88 (232)
.-.|.|++.|+|..+.. +....+.|.|.+ ..+|.. .+..+.+.. .| ..-....|.|.|. .=..+.|
T Consensus 60 ~G~htlta~A~D~aGn~-s~s~~v~vtV~~--~~~Ptv------~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~ 129 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRR-IESPVTPVLVKV--IVKPTV------KLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDF 129 (190)
T ss_dssp SEEEEEEEEEEETTSCE-EECCCEEEEEEC--CCCCEE------EEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEE
T ss_pred CccEEEEEEEEECCCCE-eeecceeEEecc--CCCCce------eecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEE
Confidence 45899999999987632 223346666665 347743 233444322 23 3445667777652 1123444
Q ss_pred EEeeCCCCCCcccEEEeCC-ceEEEECccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEEEEe
Q psy8618 89 SILKGRDTDGYGVFTIDPI-SGVIRTKSVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVLD 151 (232)
Q Consensus 89 ~i~~~~~~~~~~~f~id~~-tG~i~~~~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 151 (232)
.+. | ....-+.. ........ ..+.|+|.++|+|..... +....|.|+|.+
T Consensus 130 ~~d-g------~~v~t~t~~~y~~~~~~-----~~G~~tl~a~A~D~aGn~-s~s~~vtvtv~~ 180 (190)
T 3pdd_A 130 LVD-G------EVIGSDREAPYEYEWKA-----VEGNHEISVIAYDDDDAA-STPDSVKIFVKQ 180 (190)
T ss_dssp EET-T------EEEEEECSSSEEEEEEC-----CSEEEEEEEEEEETTCCB-CCCEEEEEEEBC
T ss_pred EEC-C------EEEecccCCCEEEEEec-----CCeeEEEEEEEEECCCCE-EecceEEEEECC
Confidence 441 1 11111110 01111111 457899999999986532 234556776643
No 58
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=92.77 E-value=1.2 Score=31.78 Aligned_cols=79 Identities=9% Similarity=0.146 Sum_probs=57.6
Q ss_pred CCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEE
Q psy8618 46 NAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIY 125 (232)
Q Consensus 46 ~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~ 125 (232)
.-|-|... .|...++-+...|..+++|.-.|.. .+..+.|.- .+..-|.|+. .|.|.+.+.+-.- ...-
T Consensus 32 C~pGF~~~-~~~~~vp~~l~~g~~lgkV~F~dC~--g~~~~~~~s------sDp~dFkV~~-DGtVya~r~v~L~-~~~~ 100 (159)
T 1op4_A 32 CKTGFPED-VYSAVLPKDVHEGQPLLNVKFSNCN--RKRKVQYES------SEPADFKVDE-DGTVYAVRSFPLT-AEQA 100 (159)
T ss_dssp CCCBCCSC-EEEECCCCSSCSSCCEEECCCBCCS--SCCCEEEEC------CCSSEEEEET-TTEEEEESCCSCS-SSCE
T ss_pred ccCCcCcc-eeEEeccccccCCceeceeecccCC--CCCceeEEc------CCCCCeEEeC-CCcEEEecceeec-CCCc
Confidence 46889877 6667777888899999999998886 344466755 2233599998 7999998886432 2234
Q ss_pred EEEEEEEeCC
Q psy8618 126 RIAVAATDNG 135 (232)
Q Consensus 126 ~l~v~a~d~~ 135 (232)
.|.|.|.|..
T Consensus 101 ~F~V~a~D~~ 110 (159)
T 1op4_A 101 KFLIYAQDKE 110 (159)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEEcCC
Confidence 7889999954
No 59
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=91.48 E-value=4.3 Score=32.08 Aligned_cols=117 Identities=19% Similarity=0.260 Sum_probs=55.2
Q ss_pred CCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECc--------
Q psy8618 44 NDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKS-------- 115 (232)
Q Consensus 44 Nd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~-------- 115 (232)
+|+++.|... .-...+.|+. |+....|.-. .+......+.|+...|....... |. +.+|.|....
T Consensus 6 dd~~g~i~F~-~~~y~V~E~~--g~v~vtV~R~-g~~~~~vtV~y~T~~GTA~ag~D-y~--~~~gtl~F~~Get~kti~ 78 (298)
T 3rb5_A 6 ADDPIRMYFE-PGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTASAGTD-FV--GRKGLLSFPPGVDEQRFR 78 (298)
T ss_dssp -----CEEES-SSEEEEETTS--CCEECCEEEC-SCCSSCEEEEEEEEESSSCBTTT-BC--CCEEEEEECTTCCEECCE
T ss_pred CCCceEEEEe-CCEEEEecCc--eEEEEEEEEE-CCCCccEEEEEEeeCCccCCCCC-cc--ccceEEEECCCceEEEEE
Confidence 4556666665 3457899986 4444444333 24334556899887775422111 11 1234333321
Q ss_pred --cCC---ccCCCEEEEEEEEEeC-CCCCcceeEEEEEEEEecCCCCCeeeCCceEEEEEe
Q psy8618 116 --VLD---HEDRSIYRIAVAATDN-GFPSRQTVRLLRVEVLDLNDNRPTFTSSSLLFKVSA 170 (232)
Q Consensus 116 --~ld---~e~~~~~~l~v~a~d~-~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~~v~~ 170 (232)
-+| +|....|. |..+.. +..........+|+|.| ||++|.|....-.++|.|
T Consensus 79 V~I~dD~~~E~dEtF~--v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E 136 (298)
T 3rb5_A 79 IEVIDDDVFEEDECFY--IRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITE 136 (298)
T ss_dssp ECBCCCSSCCCCEEEE--EEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECT
T ss_pred EEEeCCCCccCcEEEE--EEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeec
Confidence 122 33334444 444443 11222233345666776 677898765443344444
No 60
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=89.17 E-value=8.5 Score=32.11 Aligned_cols=70 Identities=20% Similarity=0.228 Sum_probs=46.3
Q ss_pred EeCCCCCCcEEEEEEeeCCCC-CCcccEEEe-CCceEEEECccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEEE
Q psy8618 76 VDKDDGSNATISYSILKGRDT-DGYGVFTID-PISGVIRTKSVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVEV 149 (232)
Q Consensus 76 ~D~D~~~~~~v~y~i~~~~~~-~~~~~f~id-~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v 149 (232)
+|+| +..++|+...-..+ .......|. .....+++..+-+ +....+.|.++++|.+.|.+++...|.|+|
T Consensus 365 sDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 365 SDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp BCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 3665 45689988543211 111235554 4445666665543 356789999999999988888888888876
No 61
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=88.92 E-value=4.2 Score=27.99 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=24.9
Q ss_pred CCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCC
Q psy8618 46 NAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRD 95 (232)
Q Consensus 46 ~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~ 95 (232)
+.+.+... .-...+.|+. |+....|.-. .+......+.|+...|..
T Consensus 3 ~~~~i~F~-~~~y~V~E~~--g~~~v~V~R~-g~~~~~v~V~y~t~~gTA 48 (137)
T 3ead_A 3 DPIRMYFE-PGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTA 48 (137)
T ss_dssp --CEEEES-SCEEEEEGGG--CEEEEEEEEE-SCCSSCEEEEEEEECSSS
T ss_pred CCEEEEEc-CCEEEEECCC--eEEEEEEEEE-CCCCceEEEEEEeECCCc
Confidence 34444443 3357888876 4444444333 243345568898877754
No 62
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=85.49 E-value=7.7 Score=27.54 Aligned_cols=58 Identities=10% Similarity=0.106 Sum_probs=28.6
Q ss_pred EEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCC
Q psy8618 34 VAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRD 95 (232)
Q Consensus 34 ~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~ 95 (232)
+.+.|.|.|-+. .+.|... .-...+.|+. |+.-..|.-...+.+....+.|+...|+.
T Consensus 10 ~~~~~~i~ddd~-~g~i~F~-~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA 67 (160)
T 3gin_A 10 AALEVLFQGPGP-VSKIFFE-QGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTA 67 (160)
T ss_dssp -----------C-EEEEEES-CSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSS
T ss_pred ceEEEEEecCCC-ccEEEEe-CCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcc
Confidence 445566666443 5666655 3457899986 45545544443443345568998877754
No 63
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.36 E-value=2.3 Score=27.67 Aligned_cols=32 Identities=13% Similarity=0.189 Sum_probs=26.4
Q ss_pred CCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCC
Q psy8618 12 ARSSHELVAEARDQGSPPRSSRVAVKISVTDVND 45 (232)
Q Consensus 12 ~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd 45 (232)
....|.+++.++|..+ .++...++|.|...+.
T Consensus 67 ~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN--LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC--CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC--CEEEeEEEEEEcCCCC
Confidence 4568999999999876 6778889999887665
No 64
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=84.18 E-value=5.1 Score=26.20 Aligned_cols=45 Identities=11% Similarity=0.095 Sum_probs=34.8
Q ss_pred eEecCCCCcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCC
Q psy8618 2 ISTREPLDREARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAP 48 (232)
Q Consensus 2 i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P 48 (232)
|.+...+|..+.-.|.++..++|..+ ..+++..+|.|.+..+..|
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~G--n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSKG--HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTTS--CEEEEEEEEEEECSSCCCC
T ss_pred EEEeCcccCCCceEEEEEEEEEcCCC--CEEEEEEEEEEeCCCcccC
Confidence 45566788888889999999999876 5667788888887665444
No 65
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=76.32 E-value=20 Score=26.09 Aligned_cols=96 Identities=17% Similarity=0.092 Sum_probs=48.3
Q ss_pred CCCEEEEEEEEEeCCCCCcceeEEEEEEEEecCCCCCeee------------CCceEEEEEeecCCCCCCeEEEEEEccC
Q psy8618 121 DRSIYRIAVAATDNGFPSRQTVRLLRVEVLDLNDNRPTFT------------SSSLLFKVSASDPDCGVNAMVNYTLGES 188 (232)
Q Consensus 121 ~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~------------~~~~~~~v~~~D~d~~~~~~i~y~l~~~ 188 (232)
..+.|.|++.|+|...... ....+.|.|.+ ..+|... .....++..+.|.+. .-..+.|.+.+
T Consensus 59 ~~G~htlta~A~D~aGn~s-~s~~v~vtV~~--~~~Ptv~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~~dg- 133 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRRI-ESPVTPVLVKV--IVKPTVKLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDG- 133 (190)
T ss_dssp CSEEEEEEEEEEETTSCEE-ECCCEEEEEEC--CCCCEEEEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEEETT-
T ss_pred CCccEEEEEEEEECCCCEe-eecceeEEecc--CCCCceeecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEEECC-
Confidence 4578999999999764321 22246666665 3467532 112344445544332 12344555432
Q ss_pred CCCCCcEEEECCceEEEEeecCCCccccEEEEEEEEEECCc
Q psy8618 189 PSRTNHFYMKSVSGEICISQDLDFESRSSYEFPVVATDRGK 229 (232)
Q Consensus 189 ~~~~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~ 229 (232)
....-+. ++-....... ..+.|.|.++|+|...
T Consensus 134 ----~~v~t~t-~~~y~~~~~~---~~G~~tl~a~A~D~aG 166 (190)
T 3pdd_A 134 ----EVIGSDR-EAPYEYEWKA---VEGNHEISVIAYDDDD 166 (190)
T ss_dssp ----EEEEEEC-SSSEEEEEEC---CSEEEEEEEEEEETTC
T ss_pred ----EEEeccc-CCCEEEEEec---CCeeEEEEEEEEECCC
Confidence 1111111 1111111111 4568999999999753
No 66
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.46 E-value=9.5 Score=24.68 Aligned_cols=32 Identities=16% Similarity=0.142 Sum_probs=25.3
Q ss_pred CCCEEEEEEEEEeCCCCCcceeEEEEEEEEecCC
Q psy8618 121 DRSIYRIAVAATDNGFPSRQTVRLLRVEVLDLND 154 (232)
Q Consensus 121 ~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd 154 (232)
..+.|.|.++++|... .++...+.|.|...+.
T Consensus 67 ~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN--LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC--CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC--CEEEeEEEEEEcCCCC
Confidence 4679999999999863 5677788888887554
No 67
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=74.82 E-value=17 Score=27.64 Aligned_cols=56 Identities=27% Similarity=0.302 Sum_probs=37.2
Q ss_pred CCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeCC---CCCcceeEEEEEEEE--ecCC
Q psy8618 97 DGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDNG---FPSRQTVRLLRVEVL--DLND 154 (232)
Q Consensus 97 ~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~---~~~~~~~~~v~i~v~--d~Nd 154 (232)
....|...|+.++.+.= -++ -...+.|.+.|+|++.+ .....+...+.|.|. |.|+
T Consensus 44 ~LPsWL~fd~~t~TfsG-~P~-~~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 44 ALPSWLHWDPHSHILEG-LPL-DTDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp SCCTTEEEETTTTEEEE-CCC-GGGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred CCCcceEEcCCCCeEEe-ccC-CCCcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 66789999998886443 333 34568899999998653 223334556778888 5555
No 68
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=73.56 E-value=31 Score=27.11 Aligned_cols=79 Identities=10% Similarity=0.080 Sum_probs=42.7
Q ss_pred cCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEE
Q psy8618 10 REARSSHELVAEARDQGSPPRSSRVAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDGSNATISYS 89 (232)
Q Consensus 10 ~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~ 89 (232)
+|....|.|.+..-. ++.........+|.|.| ||++|.|... .-...+.|+. |.....|.-...- ...-.+.|+
T Consensus 87 ~E~dEtF~v~Ls~p~-~~a~lg~~~~atvtI~d-dD~~g~~~f~-~~~~~V~E~~--g~~~~~V~Rs~~~-~g~vtV~~~ 160 (298)
T 3rb5_A 87 FEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFAFT-DSVFEITESV--GRFELKVMRYSGA-RGTVIVPYW 160 (298)
T ss_dssp CCCCEEEEEEEECCC-TTCCBCSCSEEEEEEEC-CCCCCEEECS-CSEEEECTTC--CCEEEEEEEESCC-CSCEEEEEE
T ss_pred ccCcEEEEEEEeCCC-CCcEECCCceEEEEEec-cccccccccc-cccEEeecCC--ceEEEEEEEEecC-CCCEEEEEE
Confidence 455566666555321 12223333345555565 5668888765 3367888986 5555555544332 233457777
Q ss_pred EeeCC
Q psy8618 90 ILKGR 94 (232)
Q Consensus 90 i~~~~ 94 (232)
...|.
T Consensus 161 T~dGT 165 (298)
T 3rb5_A 161 TENDT 165 (298)
T ss_dssp EEEC-
T ss_pred ecCCc
Confidence 66654
No 69
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=72.33 E-value=9.8 Score=24.82 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=32.3
Q ss_pred EEECccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEEEEecCCCCC
Q psy8618 111 IRTKSVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVLDLNDNRP 157 (232)
Q Consensus 111 i~~~~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P 157 (232)
|.+....|....+.|.++..++|... ..++++.+|.|.+..+..|
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~G--n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSKG--HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTTS--CEEEEEEEEEEECSSCCCC
T ss_pred EEEeCcccCCCceEEEEEEEEEcCCC--CEEEEEEEEEEeCCCcccC
Confidence 33445677778899999999999764 4456677888887655443
No 70
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=71.98 E-value=12 Score=23.21 Aligned_cols=30 Identities=7% Similarity=0.160 Sum_probs=21.0
Q ss_pred cCCCCeEEEEEEEEeCCCCCceeEEEEEEEEE
Q psy8618 10 REARSSHELVAEARDQGSPPRSSRVAVKISVT 41 (232)
Q Consensus 10 ~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~ 41 (232)
|...-.|.+++.++|..+ .++...+.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 445568999999999776 455566666664
No 71
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=69.45 E-value=39 Score=26.52 Aligned_cols=37 Identities=14% Similarity=0.111 Sum_probs=23.9
Q ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCCC
Q psy8618 57 VISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGRD 95 (232)
Q Consensus 57 ~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~~ 95 (232)
...|.|+. |+.-..|.-...+....-.|.|+...|..
T Consensus 18 ~y~V~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA 54 (295)
T 3us9_A 18 TYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTA 54 (295)
T ss_dssp EEEEEGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSS
T ss_pred eEEEecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcc
Confidence 57888987 45556655554343345568998877754
No 72
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=62.91 E-value=18 Score=22.28 Aligned_cols=30 Identities=13% Similarity=0.256 Sum_probs=21.9
Q ss_pred ccCCCEEEEEEEEEeCCCCCcceeEEEEEEEE
Q psy8618 119 HEDRSIYRIAVAATDNGFPSRQTVRLLRVEVL 150 (232)
Q Consensus 119 ~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~ 150 (232)
|...+.|.+.++++|... ..+...+.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 567789999999999764 344556666664
No 73
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=62.45 E-value=28 Score=24.60 Aligned_cols=48 Identities=17% Similarity=0.396 Sum_probs=30.8
Q ss_pred CCCCCeEEEEEEccCCCCCCcEEEECCceEEEEeecCCCccccEEEEEEEEEEC
Q psy8618 174 DCGVNAMVNYTLGESPSRTNHFYMKSVSGEICISQDLDFESRSSYEFPVVATDR 227 (232)
Q Consensus 174 d~~~~~~i~y~l~~~~~~~~~f~i~~~~G~i~~~~~ld~e~~~~y~l~V~a~D~ 227 (232)
|+..+..+.|... ....|.|. ..|.|++++++..-... -.+.|.|.|.
T Consensus 62 dC~g~~~~~~~ss----Dp~dFkV~-~DGtVya~r~v~L~~~~-~~F~V~a~D~ 109 (159)
T 1op4_A 62 NCNRKRKVQYESS----EPADFKVD-EDGTVYAVRSFPLTAEQ-AKFLIYAQDK 109 (159)
T ss_dssp CCSSCCCEEEECC----CSSEEEEE-TTTEEEEESCCSCSSSC-EEEEEEEEET
T ss_pred cCCCCCceeEEcC----CCCCeEEe-CCCcEEEecceeecCCC-cEEEEEEEcC
Confidence 4444444556532 22389999 58999999986543332 3778888884
No 74
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=56.08 E-value=71 Score=25.01 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=31.5
Q ss_pred EEEEEEEEeCCCCCCeecCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCcEEEEEEeeCC
Q psy8618 34 VAVKISVTDVNDNAPELVDPQEDVISVREEQPPGTEVVRARAVDKDDGSNATISYSILKGR 94 (232)
Q Consensus 34 ~~v~v~V~dvNd~~P~f~~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~v~y~i~~~~ 94 (232)
...+|+|.| ||++|.|... .-...+.|+. |....+|.-+.. ....-.+.|....|+
T Consensus 128 ~~atVtI~D-dD~agv~sf~-~~~~~V~E~~--G~~~v~V~Rs~~-~~g~VtV~y~T~~GT 183 (295)
T 3us9_A 128 STATVTIFD-DDHAGIFTFE-EPVTHVSESI--GIMEVKVLRTSG-ARGNVIVPYKTIEGT 183 (295)
T ss_dssp CEEEEEEEC-CCCCCEEEES-CSEEEEESCS--SEEEEEEEEESC-CCSCEEEEEEEECCS
T ss_pred ceeEEEEcc-cccccccccC-CCeEEEecCC--CeEEEEEEEEcC-CCccEEEEEEecCCC
Confidence 344555565 4778887655 3357888875 555555543322 222334677765554
No 75
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=46.60 E-value=66 Score=26.83 Aligned_cols=63 Identities=19% Similarity=0.269 Sum_probs=38.7
Q ss_pred EEEEEe---ecCCCCCCeEEEEEEccC--C-CCCCcEEEE-CCceEEEEeecCCCccccEEEEEEEEEECCccC
Q psy8618 165 LFKVSA---SDPDCGVNAMVNYTLGES--P-SRTNHFYMK-SVSGEICISQDLDFESRSSYEFPVVATDRGKET 231 (232)
Q Consensus 165 ~~~v~~---~D~d~~~~~~i~y~l~~~--~-~~~~~f~i~-~~~G~i~~~~~ld~e~~~~y~l~V~a~D~g~~~ 231 (232)
.+++.+ +|+| |..++|+..-- . .......|. +....+.+..+-. .....|+|.++++|+|.|.
T Consensus 356 tVtLdAs~SsDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~ 425 (437)
T 2yhg_A 356 TVSLDASGSSDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPN 425 (437)
T ss_dssp EEEEECTTCBCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSC
T ss_pred EEEEEeeeeeCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCC
Confidence 344544 3555 66777777532 1 112356665 3445566665543 4567899999999999763
No 76
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=46.55 E-value=93 Score=27.47 Aligned_cols=74 Identities=9% Similarity=0.098 Sum_probs=43.2
Q ss_pred EEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEE
Q psy8618 69 EVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVE 148 (232)
Q Consensus 69 ~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~ 148 (232)
.-..+.|.+--.+..-..+|+|. | -+..|..+......++.+. | ..+.|+|.|.|.+.+..-....+.+.|+
T Consensus 674 ~~i~f~~l~y~~~~~~~y~Y~L~-G---~d~~W~~~~~~~~~~~ytn-L---~pG~Y~f~V~a~~~~g~w~~~~~~l~I~ 745 (758)
T 3ott_A 674 LSFELSDLPYSLDEKNKFVYRLE-G---MDKEWNFLKSNINRITYSN-L---SYGNYQLIISKLERDGQPSNRPHILNIR 745 (758)
T ss_dssp EEEEEECCCTTCSSCCCEEEEEE-T---TCSSCEECCTTCCEEEECS-C---CSEEEEEEEEEBCTTSCBCSSCEEEEEE
T ss_pred EEEEEEcccCCCCccCeEEEEec-C---CCCCccCCCCCcceEEecC-C---CCccEEEEEEEeCCCCCccCccEEEEEE
Confidence 33445555544444555788884 4 3445665543334444432 3 4588999999999765323335667787
Q ss_pred EE
Q psy8618 149 VL 150 (232)
Q Consensus 149 v~ 150 (232)
|.
T Consensus 746 I~ 747 (758)
T 3ott_A 746 IL 747 (758)
T ss_dssp EC
T ss_pred EC
Confidence 75
No 77
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=46.33 E-value=1.6e+02 Score=26.15 Aligned_cols=79 Identities=15% Similarity=0.155 Sum_probs=45.3
Q ss_pred EEEEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEE
Q psy8618 69 EVVRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVE 148 (232)
Q Consensus 69 ~v~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~ 148 (232)
.-..+.|.+-..+..-..+|+|. | -+..|..... ...+..+ .| ..+.|+|.|+|.+.+..-....+.+.|+
T Consensus 709 ~~i~fs~l~y~~~~~~~y~YrL~-G---~d~~W~~~~~-~~~~~yt-nL---~pG~Y~f~V~a~n~~g~w~~~~~~l~i~ 779 (795)
T 4a2l_A 709 FSIEFVVSNYISGQHNTFAYKLE-G---YDKEWYYLTD-SRTVSYS-NL---PQGTYQFLVKAANSDGKWNPIPTALEII 779 (795)
T ss_dssp EEEEEEECCTTTTTCCEEEEEEE-T---TCSSCEEESS-CCEEEEE-CC---CSEEEEEEEEEECTTSCBCSSCEEEEEE
T ss_pred EEEEEEEccCCCccccEEEEEEe-C---CCCCccCCCC-cCeEEec-cc---CCCeEEEEEEEECCCCccCCCceEEEEE
Confidence 34555665554445566788884 4 3445666532 3344332 23 4588999999999765322335667777
Q ss_pred EEecCCCCCeeeC
Q psy8618 149 VLDLNDNRPTFTS 161 (232)
Q Consensus 149 v~d~Nd~~P~f~~ 161 (232)
|. ||.+..
T Consensus 780 I~-----Ppww~t 787 (795)
T 4a2l_A 780 VL-----PIWYKT 787 (795)
T ss_dssp EC-----CCC---
T ss_pred EE-----CCcccC
Confidence 74 565544
No 78
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=24.57 E-value=1.7e+02 Score=20.04 Aligned_cols=12 Identities=17% Similarity=0.158 Sum_probs=6.5
Q ss_pred EEEEEEEEEECC
Q psy8618 217 SYEFPVVATDRG 228 (232)
Q Consensus 217 ~y~l~V~a~D~g 228 (232)
.|.+.|.++|.+
T Consensus 83 ~y~VtV~V~~d~ 94 (141)
T 3klq_A 83 VFDVLVYVTYDE 94 (141)
T ss_dssp EEEEEEEEEECT
T ss_pred EEEEEEEEEECC
Confidence 455555555543
No 79
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=23.41 E-value=3.5e+02 Score=23.78 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=38.9
Q ss_pred EEEEEEeCCCCCCcEEEEEEeeCCCCCCcccEEEeCCceEEEECccCCccCCCEEEEEEEEEeCCCCCcceeEEEEEEEE
Q psy8618 71 VRARAVDKDDGSNATISYSILKGRDTDGYGVFTIDPISGVIRTKSVLDHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVL 150 (232)
Q Consensus 71 ~~v~a~D~D~~~~~~v~y~i~~~~~~~~~~~f~id~~tG~i~~~~~ld~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~ 150 (232)
..+.|.+-..+..-..+|+|. | -+..|..... ...+..+ .| ..+.|+|.|+|++.+..-....+.+.|+|.
T Consensus 705 i~f~~l~y~~~~~~~y~YrL~-G---~d~~W~~~~~-~~~~~yt-nL---~pG~Y~f~V~a~~~~g~w~~~~~~l~i~I~ 775 (781)
T 3v9f_A 705 LTFNVQDYSLANQVEYAYMLK-G---LENSWYTINE-QNSVTFR-NI---PPGKYEFLVKARLHNQDWSEDTTSLRIHIN 775 (781)
T ss_dssp EEEECSCSGGGGGEEEEEEEE-T---TEEEEEEESS-CSEEEEC-SC---CSEEEEEEEEEEETTSCCCSCCEEEEEEEC
T ss_pred EEEEecCCCCccccEEEEEec-C---CCCCccCcCC-cceEEEc-CC---CCceEEEEEEEECCCCccCCCceEEEEEEc
Confidence 344444433333445667773 3 3345555432 2344332 22 458899999999986532234456777774
No 80
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=23.20 E-value=2.5e+02 Score=21.40 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=24.1
Q ss_pred CccCCCEEEEEEEEEeCCCCCcceeEEEEEEEEec
Q psy8618 118 DHEDRSIYRIAVAATDNGFPSRQTVRLLRVEVLDL 152 (232)
Q Consensus 118 d~e~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~ 152 (232)
-|...+.|.++++++|... .++..+..|.|...
T Consensus 64 tY~~~GtYtVtLTVtD~~G--~s~t~t~~ItV~~~ 96 (260)
T 2c4x_A 64 KYKNPGTYKVKLIVTDNQG--ASSSFTATIKVTSA 96 (260)
T ss_dssp CCSSCEEEEEEEEEEETTS--CEEEEEEEEEEBCS
T ss_pred EeCCCEEEEEEEEEEeCCC--CeEEEEEEEEECCC
Confidence 4667899999999999764 34456667777653
No 81
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=22.26 E-value=37 Score=22.88 Aligned_cols=31 Identities=16% Similarity=0.280 Sum_probs=19.6
Q ss_pred EEEEEEEeCCCCCceeEEEEEEEEEeCCCCC
Q psy8618 17 ELVAEARDQGSPPRSSRVAVKISVTDVNDNA 47 (232)
Q Consensus 17 ~l~v~a~d~~~~~~~~~~~v~v~V~dvNd~~ 47 (232)
.|++...|...-..-..+.|++.|.|+|.||
T Consensus 49 DLtvisiDk~vL~PGESA~it~IvKDid~nP 79 (146)
T 2lv4_A 49 DLTVMSIDKSVLSPGESATITTIVKDIDGNP 79 (146)
T ss_dssp GGCEEECCCCCBCTTCEEEEEEECBBTTSCB
T ss_pred CcEEEecCccccCCCcceEEEEEEEeCCCCc
Confidence 4566666654311123678888999998854
No 82
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=20.76 E-value=1.8e+02 Score=22.26 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=23.0
Q ss_pred CcCCCCeEEEEEEEEeCCCCCceeEEEEEEEEEeC
Q psy8618 9 DREARSSHELVAEARDQGSPPRSSRVAVKISVTDV 43 (232)
Q Consensus 9 D~E~~~~~~l~v~a~d~~~~~~~~~~~v~v~V~dv 43 (232)
-|...-.|.+++.++|..+ .++.....|.|...
T Consensus 64 tY~~~GtYtVtLTVtD~~G--~s~t~t~~ItV~~~ 96 (260)
T 2c4x_A 64 KYKNPGTYKVKLIVTDNQG--ASSSFTATIKVTSA 96 (260)
T ss_dssp CCSSCEEEEEEEEEEETTS--CEEEEEEEEEEBCS
T ss_pred EeCCCEEEEEEEEEEeCCC--CeEEEEEEEEECCC
Confidence 3556678999999999776 34556666766643
Done!