BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8620
(695 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8QFV0|KCNT1_CHICK Potassium channel subfamily T member 1 OS=Gallus gallus GN=KCNT1
PE=2 SV=1
Length = 1201
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/420 (55%), Positives = 292/420 (69%), Gaps = 67/420 (15%)
Query: 4 NDLHRAMQKSQSALSQQLMILSA-------TFVCGIQHFQRAGHRHLNLFQATYYVVVTF 56
NDLHRA+Q++QSA+ Q++IL T CGIQH +RAG + L+LF++ Y+ +VTF
Sbjct: 233 NDLHRAIQRTQSAMFNQVLILICTLLCLVFTGTCGIQHLERAGEK-LSLFKSFYFCIVTF 291
Query: 57 STVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEK 116
STVGYGD P IWPSQL +VIMICVAL+VLP QFE+L + WMERQK GG+YS HRAQ+EK
Sbjct: 292 STVGYGDVTPKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQKSGGNYSRHRAQTEK 351
Query: 117 HVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMRMILQVPIWAQRVIYI 176
HVV+C ++L D +MDFLNEFYAHP LQ+YYVV+L P E+D +R +LQ+P+W+QRVIY+
Sbjct: 352 HVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRVLQIPLWSQRVIYL 411
Query: 177 QGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVPQYVQIF 236
QGS LKD DL RA+M+ EACF+L++RN D+TAAD TILR+WAVKDFAP+ P YVQI
Sbjct: 412 QGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQIL 471
Query: 237 RPENKLHVKFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSRGQEGQISQEEWHRL 296
+PENK HVKFA+ +VCE+E KYA+LA NC CP STL+TLL+HTSRGQEGQ S E+W R+
Sbjct: 472 KPENKFHVKFADHVVCEEECKYAMLALNCVCPATSTLITLLVHTSRGQEGQESPEQWQRM 531
Query: 297 YGRCSGNEIYHILLADSRFFGEEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEYEGK 356
YGRCSGNE+YHI + DS+F F EYEGK
Sbjct: 532 YGRCSGNEVYHIRMGDSKF----------------------------------FMEYEGK 557
Query: 357 SFTYASFHSHRKYGMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDMSSIESPQPR 416
SFTYA+FH+H+KYG+ + IGI R ++ S + +P PR
Sbjct: 558 SFTYAAFHAHKKYGVCL-------------------------IGIRREENKSILLNPGPR 592
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 158/188 (84%)
Query: 497 YSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIR 556
Y +E + +LD LL+ GI+ A+N+VVV+KE + SAEED +AD TIV VQTMF+ FP +
Sbjct: 830 YYMEGTIDNLDSLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLS 889
Query: 557 TITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLD 616
ITEL+ SNMRFMQFRA+D Y+L LSK+EKKE+E GS++++MFRLPFAAG VFS SMLD
Sbjct: 890 IITELTHPSNMRFMQFRAKDSYSLALSKLEKKERENGSNLAFMFRLPFAAGRVFSISMLD 949
Query: 617 TLLYQAFVKDYVITFIRLLLGVDQAPGSGFLTSMKITKDDMWIRTYGRLYQKLCSTTCEI 676
TLLYQ+FVKDY+IT RLLLG+D PGSG+L +MKIT+DD+WIRTYGRL+QKLCS++ EI
Sbjct: 950 TLLYQSFVKDYMITITRLLLGLDTTPGSGYLCAMKITEDDLWIRTYGRLFQKLCSSSAEI 1009
Query: 677 PIGIYRTQ 684
PIGIYRT+
Sbjct: 1010 PIGIYRTE 1017
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 34/36 (94%)
Query: 370 GMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQ 405
MKIT+DD+WIRTYGRL+QKLCS++ EIPIGIYRT+
Sbjct: 982 AMKITEDDLWIRTYGRLFQKLCSSSAEIPIGIYRTE 1017
>sp|Q5JUK3|KCNT1_HUMAN Potassium channel subfamily T member 1 OS=Homo sapiens GN=KCNT1
PE=2 SV=2
Length = 1230
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 220/375 (58%), Positives = 276/375 (73%), Gaps = 42/375 (11%)
Query: 4 NDLHRAMQKSQSALSQQLMILSATFVC-------GIQHFQRAGHRHLNLFQATYYVVVTF 56
ND HRA+ ++QSA+ Q++IL T +C GIQH +RAG +L+L + Y+ +VTF
Sbjct: 235 NDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGE-NLSLLTSFYFCIVTF 293
Query: 57 STVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEK 116
STVGYGD P IWPSQL +VIMICVAL+VLP QFE+L + WMERQK GG+YS HRAQ+EK
Sbjct: 294 STVGYGDVTPKIWPSQLLVVIMICVALVVLPLQFEELVYLWMERQKSGGNYSRHRAQTEK 353
Query: 117 HVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMRMILQVPIWAQRVIYI 176
HVV+C ++L D +MDFLNEFYAHP LQ+YYVV+L P E+D +R +LQ+P+W+QRVIY+
Sbjct: 354 HVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDVQVRRVLQIPLWSQRVIYL 413
Query: 177 QGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVPQYVQIF 236
QGS LKD DL RA+M+ EACF+L++RN D+TAAD TILR+WAVKDFAP+ P YVQI
Sbjct: 414 QGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQIL 473
Query: 237 RPENKLHVKFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSRGQEGQISQEEWHRL 296
+PENK HVKFA+ +VCE+E KYA+LA NC CP STL+TLL+HTSRGQEGQ S E+W R+
Sbjct: 474 KPENKFHVKFADHVVCEEECKYAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRM 533
Query: 297 YGRCSGNEIYHILLADSRFFGEEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEYEGK 356
YGRCSGNE+YHI + DS+F F EYEGK
Sbjct: 534 YGRCSGNEVYHIRMGDSKF----------------------------------FREYEGK 559
Query: 357 SFTYASFHSHRKYGM 371
SFTYA+FH+H+KYG+
Sbjct: 560 SFTYAAFHAHKKYGV 574
Score = 263 bits (671), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 123/188 (65%), Positives = 156/188 (82%)
Query: 497 YSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIR 556
Y +E + +LD LL+ GI+ A+N+VVV+KE + SAEED +AD TIV VQTMF+ FP +
Sbjct: 838 YYMEGSVDNLDSLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLS 897
Query: 557 TITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLD 616
TEL+ SNMRFMQFRA+D Y+L LSK+EK+E+E GS++++MFRLPFAAG VFS SMLD
Sbjct: 898 ITTELTHPSNMRFMQFRAKDSYSLALSKLEKRERENGSNLAFMFRLPFAAGRVFSISMLD 957
Query: 617 TLLYQAFVKDYVITFIRLLLGVDQAPGSGFLTSMKITKDDMWIRTYGRLYQKLCSTTCEI 676
TLLYQ+FVKDY+IT RLLLG+D PGSG+L +MKIT+ D+WIRTYGRL+QKLCS++ EI
Sbjct: 958 TLLYQSFVKDYMITITRLLLGLDTTPGSGYLCAMKITEGDLWIRTYGRLFQKLCSSSAEI 1017
Query: 677 PIGIYRTQ 684
PIGIYRT+
Sbjct: 1018 PIGIYRTE 1025
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 370 GMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQ 405
MKIT+ D+WIRTYGRL+QKLCS++ EIPIGIYRT+
Sbjct: 990 AMKITEGDLWIRTYGRLFQKLCSSSAEIPIGIYRTE 1025
>sp|Q6UVM3|KCNT2_HUMAN Potassium channel subfamily T member 2 OS=Homo sapiens GN=KCNT2
PE=1 SV=1
Length = 1135
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 216/375 (57%), Positives = 280/375 (74%), Gaps = 42/375 (11%)
Query: 4 NDLHRAMQKSQSALSQQLMILSATF-------VCGIQHFQRAGHRHLNLFQATYYVVVTF 56
NDLHRA+Q++QSA+ Q++IL +T +CGIQH +R G + LNLF + Y+ +VTF
Sbjct: 182 NDLHRAIQRTQSAMFNQVLILISTLLCLIFTCICGIQHLERIGKK-LNLFDSLYFCIVTF 240
Query: 57 STVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEK 116
STVG+GD P+ W S+L++V MICVAL+VLP QFEQLA+ WMERQK GG+YS HRAQ+EK
Sbjct: 241 STVGFGDVTPETWSSKLFVVAMICVALVVLPIQFEQLAYLWMERQKSGGNYSRHRAQTEK 300
Query: 117 HVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMRMILQVPIWAQRVIYI 176
HVV+C ++L D +MDFLNEFYAHP LQ+YYVV+L P E+D +R +LQ+P+W+QRVIY+
Sbjct: 301 HVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDVQVRRVLQIPMWSQRVIYL 360
Query: 177 QGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVPQYVQIF 236
QGS LKD DL RA+M++AEACF+L++R D+T++D TILR+WAVKDFAP+ P YVQI
Sbjct: 361 QGSALKDQDLLRAKMDDAEACFILSSRCEVDRTSSDHQTILRAWAVKDFAPNCPLYVQIL 420
Query: 237 RPENKLHVKFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSRGQEGQISQEEWHRL 296
+PENK H+KFA+ +VCE+E KYA+LA NC CP STL+TLL+HTSRGQEGQ S E+W ++
Sbjct: 421 KPENKFHIKFADHVVCEEEFKYAMLALNCICPATSTLITLLVHTSRGQEGQQSPEQWQKM 480
Query: 297 YGRCSGNEIYHILLADSRFFGEEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEYEGK 356
YGRCSGNE+YHI+L +S F F EYEGK
Sbjct: 481 YGRCSGNEVYHIVLEESTF----------------------------------FAEYEGK 506
Query: 357 SFTYASFHSHRKYGM 371
SFTYASFH+H+K+G+
Sbjct: 507 SFTYASFHAHKKFGV 521
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/207 (61%), Positives = 165/207 (79%), Gaps = 6/207 (2%)
Query: 491 LTSLAFYSVEFYLF----SLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQ 546
L ++ ++ + +Y+ +LDDLLR G+ A N+VVV+KE + SAEED +AD TIV VQ
Sbjct: 765 LDAICWFPMVYYMVGSIDNLDDLLRCGVTFAANMVVVDKESTMSAEEDYMADAKTIVNVQ 824
Query: 547 TMFKFFPGIRTITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAA 606
T+F+ F + ITEL+ +NMRFMQFRA+D Y+L LSK+EKKE+ERGS++++MFRLPFAA
Sbjct: 825 TLFRLFSSLSIITELTHPANMRFMQFRAKDCYSLALSKLEKKERERGSNLAFMFRLPFAA 884
Query: 607 GSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAPGSGFLTSMKITKDDMWIRTYGRLY 666
G VFS SMLDTLLYQ+FVKDY+I+ RLLLG+D PGSGFL SMKIT DD+WIRTY RLY
Sbjct: 885 GRVFSISMLDTLLYQSFVKDYMISITRLLLGLDTTPGSGFLCSMKITADDLWIRTYARLY 944
Query: 667 QKLCSTTCEIPIGIYRT--QDMSSIES 691
QKLCS+T ++PIGIYRT Q +++ ES
Sbjct: 945 QKLCSSTGDVPIGIYRTESQKLTTSES 971
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 2/45 (4%)
Query: 370 GMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRT--QDMSSIES 412
MKIT DD+WIRTY RLYQKLCS+T ++PIGIYRT Q +++ ES
Sbjct: 927 SMKITADDLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSES 971
>sp|Q6UVM4|KCNT2_RAT Potassium channel subfamily T member 2 OS=Rattus norvegicus
GN=Kcnt2 PE=1 SV=1
Length = 1142
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 217/375 (57%), Positives = 279/375 (74%), Gaps = 35/375 (9%)
Query: 4 NDLHRAMQKSQSALSQQLMILSATF-------VCGIQHFQRAGHRHLNLFQATYYVVVTF 56
NDLHRA+Q++QSA+ Q++IL +T +CGIQH +R G + LNLF + Y+ +VTF
Sbjct: 182 NDLHRAIQRTQSAMFNQVLILISTLLCLIFTCICGIQHLERIGKK-LNLFDSLYFCIVTF 240
Query: 57 STVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEK 116
STVG+GD P+ W S+L++V MICVAL+VLP QFEQLA+ WMERQK GG+YS HRAQ+EK
Sbjct: 241 STVGFGDVTPETWSSKLFVVAMICVALVVLPIQFEQLAYLWMERQKSGGNYSRHRAQTEK 300
Query: 117 HVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMRMILQVPIWAQRVIYI 176
HVV+C ++L D +MDFLNEFYAHP LQ+YYVV+L P E+D +R +LQ+P+W+QRVIY+
Sbjct: 301 HVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDVQVRRVLQIPMWSQRVIYL 360
Query: 177 QGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVPQYVQIF 236
QGS LKD DL RA+M+ AEACF+L++R D+T++D TILR+WAVKDFAP+ P YVQI
Sbjct: 361 QGSALKDQDLLRAKMDNAEACFILSSRCEVDRTSSDHQTILRAWAVKDFAPNCPLYVQIL 420
Query: 237 RPENKLHVKFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSRGQEGQISQEEWHRL 296
+PENK H+KFA+ +VCE+E KYA+LA NC CP STL+TLL+HTSRGQ
Sbjct: 421 KPENKFHIKFADHVVCEEEFKYAMLALNCICPATSTLITLLVHTSRGQ------------ 468
Query: 297 YGRCSGNEIYHILLADSRFFGEEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEYEGK 356
C EGQ S E+W + YGRCSGNE+YHI+L +S FF EYEGK
Sbjct: 469 ---CVC------------LCCREGQQSPEQWQKTYGRCSGNEVYHIVLEESTFFAEYEGK 513
Query: 357 SFTYASFHSHRKYGM 371
SFTYASFH+H+K+G+
Sbjct: 514 SFTYASFHAHKKFGV 528
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/207 (61%), Positives = 166/207 (80%), Gaps = 6/207 (2%)
Query: 491 LTSLAFYSVEFYLF----SLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQ 546
L ++ ++ + +Y+ +LDDLLR G+ A N+VVV+KE + SAEED +AD TIV VQ
Sbjct: 772 LDAICWFPMVYYMVGSIDNLDDLLRCGVTFAANMVVVDKESTMSAEEDYMADAKTIVNVQ 831
Query: 547 TMFKFFPGIRTITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAA 606
T+F+ F + ITEL+ +NMRFMQFRA+D Y+L LSK+EKKE+ERGS++++MFRLPFAA
Sbjct: 832 TLFRLFSSLSIITELTHPANMRFMQFRAKDCYSLALSKLEKKERERGSNLAFMFRLPFAA 891
Query: 607 GSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAPGSGFLTSMKITKDDMWIRTYGRLY 666
G VFS SMLDTLLYQ+FVKDY+I+ RLLLG+D PGSGFL SMKIT+DD+WIRTY RLY
Sbjct: 892 GRVFSISMLDTLLYQSFVKDYMISITRLLLGLDTIPGSGFLCSMKITEDDLWIRTYARLY 951
Query: 667 QKLCSTTCEIPIGIYRT--QDMSSIES 691
QKLCS+T ++PIGIYRT Q +++ ES
Sbjct: 952 QKLCSSTGDVPIGIYRTESQKLTTSES 978
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
Query: 370 GMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRT--QDMSSIES 412
MKIT+DD+WIRTY RLYQKLCS+T ++PIGIYRT Q +++ ES
Sbjct: 934 SMKITEDDLWIRTYARLYQKLCSSTGDVPIGIYRTESQKLTTSES 978
>sp|Q9Z258|KCNT1_RAT Potassium channel subfamily T member 1 OS=Rattus norvegicus
GN=Kcnt1 PE=1 SV=1
Length = 1237
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/420 (53%), Positives = 288/420 (68%), Gaps = 67/420 (15%)
Query: 4 NDLHRAMQKSQSALSQQLMILSATFVC-------GIQHFQRAGHRHLNLFQATYYVVVTF 56
ND HRA+ ++QSA+ Q++IL T +C GIQH +RAG +LNL + Y+ +VTF
Sbjct: 235 NDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGG-NLNLLTSFYFCIVTF 293
Query: 57 STVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEK 116
STVG+GD P IWPSQL +VI+ICV L+VLP QFE+L + WMERQK GG+YS HRA++EK
Sbjct: 294 STVGFGDVTPKIWPSQLLVVILICVTLVVLPLQFEELVYLWMERQKSGGNYSRHRARTEK 353
Query: 117 HVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMRMILQVPIWAQRVIYI 176
HVV+C ++L D +MDFLNEFYAHP LQ+YYVV+L P E+D +R +LQ+P+W+QRVIY+
Sbjct: 354 HVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPSEMDVQVRRVLQIPLWSQRVIYL 413
Query: 177 QGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVPQYVQIF 236
QGS LKD DL RA+M+ EACF+L++RN D+TAAD TILR+WAVKDFAP+ P YVQI
Sbjct: 414 QGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQIL 473
Query: 237 RPENKLHVKFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSRGQEGQISQEEWHRL 296
+PENK HVKFA+ +VCE+E KYA+LA NC CP STL+TLL+HTSRGQEGQ S E+W R+
Sbjct: 474 KPENKFHVKFADHVVCEEECKYAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRM 533
Query: 297 YGRCSGNEIYHILLADSRFFGEEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEYEGK 356
YGRCSGNE+YHI + DS+F F EYEGK
Sbjct: 534 YGRCSGNEVYHIRMGDSKF----------------------------------FREYEGK 559
Query: 357 SFTYASFHSHRKYGMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDMSSIESPQPR 416
SFTYA+FH+H+KYG+ + IG+ R ++ S + +P PR
Sbjct: 560 SFTYAAFHAHKKYGVCL-------------------------IGLKREENKSILLNPGPR 594
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/188 (65%), Positives = 157/188 (83%)
Query: 497 YSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIR 556
Y +E + +LD LL+ GI+ A+N+VVV+KE + SAEED +AD TIV VQTMF+ FP +
Sbjct: 836 YYMEGSVDNLDSLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLS 895
Query: 557 TITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLD 616
TEL+ SNMRFMQFRA+D Y+L LSK+EK+E+E GS++++MFRLPFAAG VFS SMLD
Sbjct: 896 ITTELTHPSNMRFMQFRAKDSYSLALSKLEKQERENGSNLAFMFRLPFAAGRVFSISMLD 955
Query: 617 TLLYQAFVKDYVITFIRLLLGVDQAPGSGFLTSMKITKDDMWIRTYGRLYQKLCSTTCEI 676
TLLYQ+FVKDY+IT RLLLG+D PGSG+L +MK+T+DD+WIRTYGRL+QKLCS++ EI
Sbjct: 956 TLLYQSFVKDYMITITRLLLGLDTTPGSGYLCAMKVTEDDLWIRTYGRLFQKLCSSSAEI 1015
Query: 677 PIGIYRTQ 684
PIGIYRT+
Sbjct: 1016 PIGIYRTE 1023
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 34/36 (94%)
Query: 370 GMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQ 405
MK+T+DD+WIRTYGRL+QKLCS++ EIPIGIYRT+
Sbjct: 988 AMKVTEDDLWIRTYGRLFQKLCSSSAEIPIGIYRTE 1023
>sp|Q6ZPR4|KCNT1_MOUSE Potassium channel subfamily T member 1 OS=Mus musculus GN=Kcnt1
PE=2 SV=2
Length = 1224
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/420 (53%), Positives = 287/420 (68%), Gaps = 67/420 (15%)
Query: 4 NDLHRAMQKSQSALSQQLMILSATFVC-------GIQHFQRAGHRHLNLFQATYYVVVTF 56
ND HRA+ ++QSA+ Q++IL T +C GIQH +RAG +LNL + Y+ +VTF
Sbjct: 221 NDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGG-NLNLLTSFYFCIVTF 279
Query: 57 STVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEK 116
STVG+GD P IWPSQL +VI+ICV L+VLP QFE+L + WMERQK GG+YS HRA++EK
Sbjct: 280 STVGFGDVTPKIWPSQLLVVILICVTLVVLPLQFEELVYLWMERQKSGGNYSRHRARTEK 339
Query: 117 HVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMRMILQVPIWAQRVIYI 176
HVV+C ++L D +MDFLNEFYAHP LQ+YYVV+L P E+D +R +LQ+P+W+QRVIY+
Sbjct: 340 HVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPSEMDVQVRRVLQIPLWSQRVIYL 399
Query: 177 QGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVPQYVQIF 236
QGS LKD DL RA+M+ EACF+L++RN D+TAAD TILR+WAVKDFAP+ P YVQI
Sbjct: 400 QGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQIL 459
Query: 237 RPENKLHVKFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSRGQEGQISQEEWHRL 296
+PENK HVKFA+ +VCE+E KYA+LA NC CP STL+TLL+HTSRGQEGQ S E+W R
Sbjct: 460 KPENKFHVKFADHVVCEEECKYAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRT 519
Query: 297 YGRCSGNEIYHILLADSRFFGEEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEYEGK 356
YGRCSGNE+YHI + DS+F F EYEGK
Sbjct: 520 YGRCSGNEVYHIRMGDSKF----------------------------------FREYEGK 545
Query: 357 SFTYASFHSHRKYGMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDMSSIESPQPR 416
SFTYA+FH+H+KYG+ + IG+ R ++ S + +P PR
Sbjct: 546 SFTYAAFHAHKKYGVCL-------------------------IGLKREENKSILLNPGPR 580
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/188 (65%), Positives = 157/188 (83%)
Query: 497 YSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIR 556
Y +E + +LD LL+ GI+ A+N+VVV+KE + SAEED +AD TIV VQTMF+ FP +
Sbjct: 824 YYMEGSVDNLDSLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLS 883
Query: 557 TITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLD 616
TEL+ SNMRFMQFRA+D Y+L LSK+EK+E+E GS++++MFRLPFAAG VFS SMLD
Sbjct: 884 ITTELTHPSNMRFMQFRAKDSYSLALSKLEKQERENGSNLAFMFRLPFAAGRVFSISMLD 943
Query: 617 TLLYQAFVKDYVITFIRLLLGVDQAPGSGFLTSMKITKDDMWIRTYGRLYQKLCSTTCEI 676
TLLYQ+FVKDY+IT RLLLG+D PGSG+L +MK+T+DD+WIRTYGRL+QKLCS++ EI
Sbjct: 944 TLLYQSFVKDYMITITRLLLGLDTTPGSGYLCAMKVTEDDLWIRTYGRLFQKLCSSSAEI 1003
Query: 677 PIGIYRTQ 684
PIGIYRT+
Sbjct: 1004 PIGIYRTE 1011
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 34/36 (94%)
Query: 370 GMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQ 405
MK+T+DD+WIRTYGRL+QKLCS++ EIPIGIYRT+
Sbjct: 976 AMKVTEDDLWIRTYGRLFQKLCSSSAEIPIGIYRTE 1011
>sp|Q28265|KCMA1_CANFA Calcium-activated potassium channel subunit alpha-1 (Fragment)
OS=Canis familiaris GN=KCNMA1 PE=2 SV=2
Length = 1159
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 33 QHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
++FQ + + L ++ Y ++VT STVGYGD P L++V I L + + +
Sbjct: 267 ENFQNS--QALTYWECVYLLMVTMSTVGYGDVYAKTTPGGLFIVFFILGGLAMFASYVPE 324
Query: 93 LAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL 151
+ R+K GGSYS+ KH+VVC + +++ FL +F N +V L
Sbjct: 325 IIEIIGNRKKYGGSYSA--VSGRKHIVVCGH-ITLESVSHFLKDFLHKDRDDVNVEIVFL 381
Query: 152 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAA 211
+ + + + + +V + QGS L DLAR ++ A+AC +LA + D A
Sbjct: 382 HNISPNLELEALFKRHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCDDPDAE 439
Query: 212 DEHTILRSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLAN 263
D I+R ++K++ P + Q+ + NK H+ K + +C EL+ +A
Sbjct: 440 DASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELRLGFIAQ 499
Query: 264 NCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
+C G ST++ L S G +I ++ WH+ Y NE+Y L+ S F G
Sbjct: 500 SCLAQGLSTMLANLF--SIGSFIKIEEDTWHKYYLEGVSNEMYTEYLS-SAFVG 550
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 451 DLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQKLTSLAFYSVEFYLFSLDDLL 510
DL I L + V+++ N+ ++ +L D I+A + S+ F DD +
Sbjct: 791 DLRAVNINLCDMCVILSAN-QNNIDDTSLQDKECILASLNIKSMQF----------DDSI 839
Query: 511 RAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIRT------ITELSQS 564
G+L A + + S+ +++ V M + P I T ITEL
Sbjct: 840 --GVLQANSQGFTPPGMDKSSPDNS--------PVHGMLRQ-PSITTGVNIPIITELVND 888
Query: 565 SNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLDTLLYQAFV 624
+N++F+ D L Y+ + PFA G+ F+ S+LD+L+ +
Sbjct: 889 TNVQFLDQDDDDDPDTEL---------------YLTQ-PFACGTAFAVSVLDSLMSATYF 932
Query: 625 KDYVITFIRLLLGVDQAP 642
D ++T IR L+ P
Sbjct: 933 NDNILTLIRTLVTGGATP 950
>sp|Q8AYS8|KCMA1_CHICK Calcium-activated potassium channel subunit alpha-1 OS=Gallus
gallus GN=KCNMA1 PE=1 SV=2
Length = 1137
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 142/294 (48%), Gaps = 19/294 (6%)
Query: 33 QHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
++FQ ++ L ++ Y ++VT STVGYGD +L+MV I L + + +
Sbjct: 288 ENFQN--NQQLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE 345
Query: 93 LAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL 151
+ R+K GGSYS+ KH+VVC + +++ +FL +F N +V L
Sbjct: 346 IIELIGNRKKYGGSYSA--VSGRKHIVVCGH-ITLESVSNFLKDFLHKDRDDVNVEIVFL 402
Query: 152 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAA 211
+ + + + + +V + QGS L DLAR ++ A+AC +LA + +D A
Sbjct: 403 HNISPNLELEALFKRHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAE 460
Query: 212 DEHTILRSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLAN 263
D I+R ++K++ P + Q+ + NK H+ K + +C ELK +A
Sbjct: 461 DASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQ 520
Query: 264 NCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
+C PG ST++ L S +I ++ W + Y NE+Y L+ S F G
Sbjct: 521 SCLAPGLSTMLANLF--SMRSFIKIEEDTWQKYYLEGVANEMYTEYLS-SAFVG 571
Score = 38.1 bits (87), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 555 IRTITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASM 614
I ITEL SN++F+ D L Y+ + PFA G+ F+ S+
Sbjct: 900 IPIITELVNDSNVQFLDQDDDDDPDTEL---------------YLTQ-PFACGTAFAVSV 943
Query: 615 LDTLLYQAFVKDYVITFIRLLLGVDQAP 642
LD+L+ + D ++T IR L+ P
Sbjct: 944 LDSLMSATYFNDNILTLIRTLVTGGATP 971
>sp|Q28204|KCMA1_BOVIN Calcium-activated potassium channel subunit alpha-1 OS=Bos taurus
GN=KCNMA1 PE=1 SV=2
Length = 1166
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 33 QHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
++FQ ++ L ++ Y ++VT STVGYGD +L+MV I L + + +
Sbjct: 317 ENFQN--NQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE 374
Query: 93 LAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL 151
+ R+K GGSYS+ KH+VVC + +++ +FL +F N +V L
Sbjct: 375 IIELIGNRKKYGGSYSA--VSGRKHIVVCGH-ITLESVSNFLKDFLHKDRDDVNVEIVFL 431
Query: 152 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAA 211
+ + + + + +V + QGS L DLAR ++ A+AC +LA + +D A
Sbjct: 432 HNISPNLELEALFKRHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAE 489
Query: 212 DEHTILRSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLAN 263
D I+R ++K++ P + Q+ + NK H+ K + +C ELK +A
Sbjct: 490 DASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQ 549
Query: 264 NCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
+C G ST++ L S +I ++ W + Y NE+Y L+ S F G
Sbjct: 550 SCLAQGLSTMLANLF--SMRSFIKIEEDTWQKYYLEGVSNEMYTEYLS-SAFVG 600
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 451 DLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQKLTSLAFYSVEFYLFSLDDLL 510
DL I L + V+++ N+ ++ +L D I+A + S+ F DD +
Sbjct: 841 DLRAVNINLCDMCVILSAN-QNNIDDTSLQDKECILASLNIKSMQF----------DDSI 889
Query: 511 RAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIRT------ITELSQS 564
G+L A + + S+ +++ V M + P I T ITEL
Sbjct: 890 --GVLQANSQGFTPPGMDRSSPDNS--------PVHGMLRQ-PSITTGVNIPIITELVND 938
Query: 565 SNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLDTLLYQAFV 624
+N++F+ D L Y+ + PFA G+ F+ S+LD+L+ +
Sbjct: 939 TNVQFLDQDDDDDPDTEL---------------YLTQ-PFACGTAFAVSVLDSLMSATYF 982
Query: 625 KDYVITFIRLLLGVDQAP 642
D ++T IR L+ P
Sbjct: 983 NDNILTLIRTLVTGGATP 1000
>sp|Q9BG98|KCMA1_RABIT Calcium-activated potassium channel subunit alpha-1 OS=Oryctolagus
cuniculus GN=KCNMA1 PE=2 SV=1
Length = 1179
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 33 QHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
++FQ ++ L ++ Y ++VT STVGYGD +L+MV I L + + +
Sbjct: 330 ENFQN--NQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE 387
Query: 93 LAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL 151
+ R+K GGSYS+ KH+VVC + +++ +FL +F N +V L
Sbjct: 388 IIELIGNRKKYGGSYSA--VSGRKHIVVCGH-ITLESVSNFLKDFLHKDRDDVNVEIVFL 444
Query: 152 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAA 211
+ + + + + +V + QGS L DLAR ++ A+AC +LA + +D A
Sbjct: 445 HNISPNLELEALFKRHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAE 502
Query: 212 DEHTILRSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLAN 263
D I+R ++K++ P + Q+ + NK H+ K + +C ELK +A
Sbjct: 503 DASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQ 562
Query: 264 NCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
+C G ST++ L S +I ++ W + Y NE+Y L+ S F G
Sbjct: 563 SCLAQGLSTMLANLF--SMRSFIKIEEDTWQKYYLEGVSNEMYTEYLS-SAFVG 613
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 603 PFAAGSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAP 642
PFA G+ F+ S+LD+L+ + D ++T IR L+ P
Sbjct: 974 PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATP 1013
>sp|Q08460|KCMA1_MOUSE Calcium-activated potassium channel subunit alpha-1 OS=Mus musculus
GN=Kcnma1 PE=1 SV=2
Length = 1209
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 33 QHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
++FQ ++ L ++ Y ++VT STVGYGD +L+MV I L + + +
Sbjct: 329 ENFQN--NQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE 386
Query: 93 LAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL 151
+ R+K GGSYS+ KH+VVC + +++ +FL +F N +V L
Sbjct: 387 IIELIGNRKKYGGSYSA--VSGRKHIVVCGH-ITLESVSNFLKDFLHKDRDDVNVEIVFL 443
Query: 152 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAA 211
+ + + + + +V + QGS L DLAR ++ A+AC +LA + +D A
Sbjct: 444 HNISPNLELEALFKRHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAE 501
Query: 212 DEHTILRSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLAN 263
D I+R ++K++ P + Q+ + NK H+ K + +C ELK +A
Sbjct: 502 DASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQ 561
Query: 264 NCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
+C G ST++ L S +I ++ W + Y NE+Y L+ S F G
Sbjct: 562 SCLAQGLSTMLANLF--SMRSFIKIEEDTWQKYYLEGVSNEMYTEYLS-SAFVG 612
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 603 PFAAGSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAP 642
PFA G+ F+ S+LD+L+ + D ++T IR L+ P
Sbjct: 1004 PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATP 1043
>sp|Q90ZC7|KCMA1_XENLA Calcium-activated potassium channel subunit alpha-1 OS=Xenopus
laevis GN=kcnma1 PE=2 SV=1
Length = 1196
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 17/286 (5%)
Query: 41 RHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMER 100
+ L+ ++ Y ++VT STVGYGD +L+MV I L + + ++ R
Sbjct: 303 QDLSYWECMYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNR 362
Query: 101 QKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLLSPMELDTT 159
+K GGSYS+ KH+VVC + +++ +FL +F N +V L + +
Sbjct: 363 KKYGGSYSA--VSGRKHIVVCGH-ITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLE 419
Query: 160 MRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRS 219
+ + + +V + QGS L DLAR ++ A+AC +LA + +D A D I+R
Sbjct: 420 LEALFKKHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRV 477
Query: 220 WAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLANNCTCPGAS 271
++K++ P + Q+ + NK H+ K + +C ELK +A +C G S
Sbjct: 478 ISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKDGDDAICLAELKLGFIAQSCLAQGLS 537
Query: 272 TLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
T++ L S +I ++ W + Y NE+Y L+ S F G
Sbjct: 538 TMLANLF--SMRSFIKIEEDTWQKYYLEGVANEMYTEYLS-SAFVG 580
Score = 40.8 bits (94), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 103/272 (37%), Gaps = 64/272 (23%)
Query: 451 DLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQKLTSLAFYSVEFYLFSLDDLL 510
DL I L + V+++ N+ ++ +L D I+A + S+ F DD +
Sbjct: 822 DLRAVNINLCDMCVILSAN-QNNIDDTSLQDKECILASLNIKSMQF----------DDSI 870
Query: 511 RAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIRTITELSQSSNMRFM 570
G+L A + + S+ +++ VA Q I ITEL SN++F+
Sbjct: 871 --GLLQANSQGFTPPGMERSSPDNSPLHG---VARQASITTGANIPIITELVNDSNVQFL 925
Query: 571 QFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLDTLLYQAFVKDYVIT 630
D L Y+ + PFA G+ F+ S+LD+L+ + D ++T
Sbjct: 926 DQDDDDDPDTEL---------------YLTQ-PFACGTAFAVSVLDSLMSATYFNDNILT 969
Query: 631 FIRLLLGVDQAPG------------SGFLTSMKITKDDMWIRT----------------- 661
IR L+ P G+ T + D R
Sbjct: 970 LIRTLVTGGATPELEALVAEENALRGGYSTPQTLANRDR-CRVAQLALYDGPFADLGDGG 1028
Query: 662 -YGRLYQKLCSTTCEIPIGIYRTQDMSSIESP 692
YG LY K T + GIYR +D + I +P
Sbjct: 1029 CYGDLYCKALKTYNMLCFGIYRLRD-AHISTP 1059
>sp|Q12791|KCMA1_HUMAN Calcium-activated potassium channel subunit alpha-1 OS=Homo sapiens
GN=KCNMA1 PE=1 SV=2
Length = 1236
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 33 QHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
++FQ ++ L ++ Y ++VT STVGYGD +L+MV I L + + +
Sbjct: 329 ENFQ--NNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE 386
Query: 93 LAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL 151
+ R+K GGSYS+ KH+VVC + +++ +FL +F N +V L
Sbjct: 387 IIELIGNRKKYGGSYSA--VSGRKHIVVCGH-ITLESVSNFLKDFLHKDRDDVNVEIVFL 443
Query: 152 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAA 211
+ + + + + +V + QGS L DLAR ++ A+AC +LA + +D A
Sbjct: 444 HNISPNLELEALFKRHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAE 501
Query: 212 DEHTILRSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLAN 263
D I+R ++K++ P + Q+ + NK H+ K + +C ELK +A
Sbjct: 502 DASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQ 561
Query: 264 NCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
+C G ST++ L S +I ++ W + Y NE+Y L+ S F G
Sbjct: 562 SCLAQGLSTMLANLF--SMRSFIKIEEDTWQKYYLEGVSNEMYTEYLS-SAFVG 612
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 451 DLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQKLTSLAFYSVEFYLFSLDDLL 510
DL I L + V+++ N+ ++ +L D I+A + S+ F DD +
Sbjct: 911 DLRAVNINLCDMCVILSAN-QNNIDDTSLQDKECILASLNIKSMQF----------DDSI 959
Query: 511 RAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIRT------ITELSQS 564
G+L A + + S+ +++ V M + P I T ITEL
Sbjct: 960 --GVLQANSQGFTPPGMDRSSPDNS--------PVHGMLRQ-PSITTGVNIPIITELVND 1008
Query: 565 SNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLDTLLYQAFV 624
+N++F+ D L Y+ + PFA G+ F+ S+LD+L+ +
Sbjct: 1009 TNVQFLDQDDDDDPDTEL---------------YLTQ-PFACGTAFAVSVLDSLMSATYF 1052
Query: 625 KDYVITFIRLLLGVDQAP 642
D ++T IR L+ P
Sbjct: 1053 NDNILTLIRTLVTGGATP 1070
>sp|O18866|KCMA1_PIG Calcium-activated potassium channel subunit alpha-1 (Fragment)
OS=Sus scrofa GN=KCNMA1 PE=2 SV=2
Length = 1152
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 33 QHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
++FQ ++ L ++ Y ++VT STVGYGD +L+MV I L + + +
Sbjct: 303 ENFQN--NQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE 360
Query: 93 LAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL 151
+ R+K GGSYS+ KH+VVC + +++ +FL +F N +V L
Sbjct: 361 IIELIGNRKKYGGSYSA--VSGRKHIVVCGH-ITLESVSNFLKDFLHKDRDDVNVEIVFL 417
Query: 152 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAA 211
+ + + + + +V + QGS L DLAR ++ A+AC +LA + +D A
Sbjct: 418 HNISPNLELEALFKRHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAE 475
Query: 212 DEHTILRSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLAN 263
D I+R ++K++ P + Q+ + NK H+ K + +C ELK +A
Sbjct: 476 DASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQ 535
Query: 264 NCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
+C G ST++ L S +I ++ W + Y NE+Y L+ S F G
Sbjct: 536 SCLAQGLSTMLANLF--SMRSFIKIEEDTWQKYYLEGVSNEMYTEYLS-SAFVG 586
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 603 PFAAGSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAP 642
PFA G+ F+ S+LD+L+ + D ++T IR L+ P
Sbjct: 947 PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATP 986
>sp|Q62976|KCMA1_RAT Calcium-activated potassium channel subunit alpha-1 OS=Rattus
norvegicus GN=Kcnma1 PE=1 SV=3
Length = 1209
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 33 QHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
++FQ ++ L ++ Y ++VT STVGYGD +L+MV I L + + +
Sbjct: 330 ENFQN--NQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE 387
Query: 93 LAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL 151
+ R+K GGSYS+ KH+VVC + +++ +FL +F N +V L
Sbjct: 388 IIELIGNRKKYGGSYSA--VSGRKHIVVCGH-ITLESVSNFLKDFLHKDRDDVNVEIVFL 444
Query: 152 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAA 211
+ + + + + +V + QGS L DLAR ++ A+AC +LA + +D A
Sbjct: 445 HNISPNLELEALFKRHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAE 502
Query: 212 DEHTILRSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLAN 263
D I+R ++K++ P + Q+ + NK H+ K + +C ELK +A
Sbjct: 503 DASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQ 562
Query: 264 NCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
+C G ST++ L S +I ++ W + Y NE+Y L+ S F G
Sbjct: 563 SCLAQGLSTMLANLF--SMRSFIKIEEDTWQKYYLEGVSNEMYTEYLS-SAFVG 613
Score = 37.0 bits (84), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 603 PFAAGSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAP 642
PFA G+ F+ S+LD+L+ + D ++T IR L+ P
Sbjct: 1005 PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATP 1044
>sp|O18867|KCMA1_MACMU Calcium-activated potassium channel subunit alpha-1 (Fragment)
OS=Macaca mulatta GN=KCNMA1 PE=2 SV=1
Length = 1151
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 33 QHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
++FQ ++ L ++ Y ++VT STVGYGD +L+MV I L + + +
Sbjct: 302 ENFQN--NQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPE 359
Query: 93 LAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL 151
+ R+K GGSYS+ KH+VVC + +++ +FL +F N +V L
Sbjct: 360 IIELIGNRKKYGGSYSA--VSGRKHIVVCGH-ITLESVSNFLKDFLHKDRDDVNVEIVFL 416
Query: 152 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAA 211
+ + + + + +V + QGS L DLAR ++ A+AC +LA + +D A
Sbjct: 417 HNISPNLELEALFKRHF--TQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAE 474
Query: 212 DEHTILRSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLAN 263
D I+R ++K++ P + Q+ + NK H+ K + +C ELK +A
Sbjct: 475 DASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQ 534
Query: 264 NCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFG 317
+C G ST++ L S +I ++ W + Y NE+Y L+ S F G
Sbjct: 535 SCLAQGLSTMLANLF--SMRSFIKIEEDTWQKYYLEGVSNEMYTEYLS-SAFVG 585
Score = 37.0 bits (84), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 603 PFAAGSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAP 642
PFA G+ F+ S+LD+L+ + D ++T IR L+ P
Sbjct: 946 PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATP 985
>sp|Q95V25|SLO1_CAEEL Calcium-activated potassium channel slo-1 OS=Caenorhabditis elegans
GN=slo-1 PE=1 SV=2
Length = 1140
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 15/275 (5%)
Query: 48 ATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSY 107
+ Y+V+VT STVGYGD +L+M+ I L + + ++A RQK GG Y
Sbjct: 306 SVYFVLVTMSTVGYGDIYCTTLCGRLFMIFFILFGLAMFASYVPEIADLIGNRQKYGGEY 365
Query: 108 SSHRAQSEKHVVVCSTTLHADTIMDFLNEF-YAHPLLQNYYVVLLSPMELDTTMRMILQV 166
+ KH+VVC + D++ FL +F + + VV L + D + + +
Sbjct: 366 KGEHGK--KHIVVCGHITY-DSVSHFLQDFLHEDRDDVDVEVVFLHRVVPDLELEGLFKR 422
Query: 167 PIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFA 226
+V + G+ + DL+R ++ +A+AC VLA + ++ A D I+R ++K+++
Sbjct: 423 HF--TKVEFFTGTVMDSLDLSRVKIGDADACLVLANKYSTNPDAEDAANIMRVISIKNYS 480
Query: 227 PDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLANNCTCPGASTLVTLLL 278
D+ VQ+ + NK ++ K + ++C ELK +A +C PG ST++ L
Sbjct: 481 SDIRVIVQLMQYHNKAYLLNIPSWDWKRGDDVICLAELKLGFIAQSCLAPGFSTMMANLF 540
Query: 279 HTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADS 313
+ Q + +W LY +G E+Y L+ S
Sbjct: 541 AMRSFKTSQTT-PDWLNLYLCGAGMEMYTDTLSHS 574
Score = 39.7 bits (91), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 40/192 (20%)
Query: 451 DLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQKLTSLAFYSVEFYLFSLDDLL 510
DL I L + V+++ + N+ E+ TLAD I+A + ++ F DD L
Sbjct: 871 DLRAVNINLCDMCVIISARVPNT-EDTTLADKEAILASLNIKAMQF----------DDTL 919
Query: 511 RAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIRTITELSQSSNMRFM 570
G + + + L + I + KF + ITEL SN++F+
Sbjct: 920 --GFFPMRH---------QTGDRSPLG--SPISMQKKGAKFGTNVPMITELVNDSNVQFL 966
Query: 571 QFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLDTLLYQAFVKDYVIT 630
D L + PFA G+ F+ S+LD+L+ + D +T
Sbjct: 967 DQDDDDDPDTELYLTQ----------------PFACGTAFAISVLDSLMSTTYFNDSALT 1010
Query: 631 FIRLLLGVDQAP 642
IR L+ P
Sbjct: 1011 LIRTLVTGGATP 1022
>sp|Q03720|SLO_DROME Calcium-activated potassium channel slowpoke OS=Drosophila
melanogaster GN=slo PE=1 SV=3
Length = 1200
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 16/277 (5%)
Query: 39 GHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWM 98
HR L+ + Y+++VT STVGYGD + + ++V + V L + + ++
Sbjct: 283 AHR-LSYWTCVYFLIVTMSTVGYGDVYCETVLGRTFLVFFLLVGLAMFASSIPEIIELVG 341
Query: 99 ERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLLSPMELD 157
K GG R ++H+VVC + +++ FL +F + VV L D
Sbjct: 342 SGNKYGGEL--KREHGKRHIVVCGHITY-ESVSHFLKDFLHEDREDVDVEVVFLHRKPPD 398
Query: 158 TTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTIL 217
+ + + V + QG+ + DL R +++EA+AC VLA + D A D I+
Sbjct: 399 LELEGLFKRHF--TTVEFFQGTIMNPIDLQRVKVHEADACLVLANKYCQDPDAEDAANIM 456
Query: 218 RSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLANNCTCPG 269
R ++K+++ D+ +Q+ + NK ++ K + ++C ELK +A +C PG
Sbjct: 457 RVISIKNYSDDIRVIIQLMQYHNKAYLLNIPSWDWKQGDDVICLAELKLGFIAQSCLAPG 516
Query: 270 ASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIY 306
ST++ L R + + W Y R +G E+Y
Sbjct: 517 FSTMMANLF-AMRSFKTSPDMQSWTNDYLRGTGMEMY 552
>sp|A8MYU2|KCNU1_HUMAN Potassium channel subfamily U member 1 OS=Homo sapiens GN=KCNU1
PE=1 SV=2
Length = 1149
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 146/330 (44%), Gaps = 36/330 (10%)
Query: 8 RAMQKSQSALSQQLM--ILSATFVCG--IQHFQRAG--------HRHLNLFQATYYVVVT 55
RA++ S S +L+ ILS F I + +G ++++ F++ Y V+ T
Sbjct: 214 RAIKTSNSVKFSKLLSIILSTWFTAAGFIHLVENSGDPWLKGRNSQNISYFESIYLVMAT 273
Query: 56 FSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSE 115
STVG+GD V + +++ +LI+ ++ + ++K SY + + +
Sbjct: 274 TSTVGFGDVVAKTSLGRTFIMFFTLGSLILFANYIPEMVELFANKRKYTSSYEALKGK-- 331
Query: 116 KHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLLS----PMELDTTMRMILQVPIWA 170
K +VVC + D++ FL F + N +V L +EL+T + L
Sbjct: 332 KFIVVCGN-ITVDSVTAFLRNFLRDKSGEINTEIVFLGETPPSLELETIFKCYLAY---- 386
Query: 171 QRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVP 230
+I GS +K DL R + AEAC ++A SD A D I+R ++K++
Sbjct: 387 --TTFISGSAMKWEDLRRVAVESAEACLIIANPLCSDSHAEDISNIMRVLSIKNYDSTTR 444
Query: 231 QYVQIFRPENKLHVK--------FAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSR 282
+QI + NK+++ + I+C ELK +A C PG T +T L
Sbjct: 445 IIIQILQSHNKVYLPKIPSWNWDTGDNIICFAELKLGFIAQGCLVPGLCTFLTSLF--VE 502
Query: 283 GQEGQISQEEWHRLYGRCSGNEIYHILLAD 312
+ + ++ W + + N+I L+D
Sbjct: 503 QNKKVMPKQTWKKHFLNSMKNKILTQRLSD 532
Score = 40.0 bits (92), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 555 IRTITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASM 614
+ +TEL SN+ F++ L +E +E H+S F + G+VFS S
Sbjct: 859 VPILTELKNPSNIHFIE---------QLGGLEGSLQETNLHLSTAF----STGTVFSGSF 905
Query: 615 LDTLLYQAFVKDYVITFIRLLL 636
LD+LL AF +V+ +++L+
Sbjct: 906 LDSLLATAFYNYHVLELLQMLV 927
>sp|A5LFX5|KCNU1_MACFA Potassium channel subfamily U member 1 OS=Macaca fascicularis
GN=KCNU1 PE=2 SV=1
Length = 1149
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 38/331 (11%)
Query: 8 RAMQKSQSALSQQLM--ILSATFVCG--IQHFQRAG--------HRHLNLFQATYYVVVT 55
RA++ S S +L+ +LS F I + +G ++++ F + Y V+ T
Sbjct: 214 RAIKTSNSVKFSKLLSIVLSTWFTAAGFIHLVENSGDPWLKGRNSQNISYFDSVYLVMAT 273
Query: 56 FSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSE 115
STVG+GD V + +++ +LI+ ++ + ++K SY + + +
Sbjct: 274 TSTVGFGDVVAKTSLGRTFIIFFTLGSLILFANYIPEMVELFANKRKYTSSYEALKGK-- 331
Query: 116 KHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLL--SP--MELDTTMRMILQVPIWA 170
K +VVC + D++ FL F + N +V L SP +EL+T + L
Sbjct: 332 KFIVVCGN-ITVDSVTAFLRNFLRRKSGEINTEIVFLGESPPSLELETIFKCYLAY---- 386
Query: 171 QRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVP 230
+I GS +K DL R + AEAC ++A SD A D I+R ++K++
Sbjct: 387 --TTFISGSAMKWEDLRRVAVESAEACLIIANPLCSDSHAEDISNIMRVLSIKNYDSTTR 444
Query: 231 QYVQIFRPENKLHV--------KFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSR 282
+QI + NK+++ + I+C ELK +A C PG T +T L
Sbjct: 445 IIIQILQSHNKVYLPKIPSWDWDAGDNIICFAELKLGFIAQGCLVPGLCTFLTSLFVE-- 502
Query: 283 GQEGQIS-QEEWHRLYGRCSGNEIYHILLAD 312
Q +++ ++ W + + N I L+D
Sbjct: 503 -QNRKVTPKQTWQKHFLNSMKNNILTQRLSD 532
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 555 IRTITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASM 614
+ + EL SN+ F++ L +E +E H+S F+ G+VFS S
Sbjct: 859 VPILIELKNPSNIHFIE---------QLGGLEGSLQETNLHLS----TAFSTGTVFSGSF 905
Query: 615 LDTLLYQAFVKDYVITFIRLLL 636
LD+LL +F +V+ +++L+
Sbjct: 906 LDSLLATSFYNYHVLELLQMLV 927
>sp|O54982|KCNU1_MOUSE Potassium channel subfamily U member 1 OS=Mus musculus GN=Kcnu1
PE=1 SV=2
Length = 1121
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 22/249 (8%)
Query: 43 LNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQK 102
++ F++ Y V T STVG+GD V ++++V +LI+ ++ + R+K
Sbjct: 261 MSYFESIYLVTATMSTVGFGDVVAKTSLGRIFIVFFTLGSLILFANYIPEMVELFSTRKK 320
Query: 103 LGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQ-NYYVVLLSP----MELD 157
Y + + +K +VVC + D++ FL F + N +V L +EL+
Sbjct: 321 YTKPYEA--VKGKKFIVVCGN-ITVDSVTAFLRNFLHWKSGEINIEIVFLGETLPCLELE 377
Query: 158 TTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTIL 217
T ++ ++ G+ LK DL R + +EAC +LA SD D I+
Sbjct: 378 TLLK------CHTSCTNFVCGTALKFEDLKRVAVENSEACLILANHFCSDLHDEDNSNIM 431
Query: 218 RSWAVKDFAPDVPQYVQIFRPENKLHV--------KFAEFIVCEDELKYALLANNCTCPG 269
R ++K++ P +QI + +NK+ + + I+C ELK +A C PG
Sbjct: 432 RVLSIKNYYPQTRVIIQILQSQNKVFLSKIPNWDWSAGDNILCFAELKLGFIAQGCLVPG 491
Query: 270 ASTLVTLLL 278
T +T L
Sbjct: 492 LCTFLTTLF 500
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 555 IRTITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASM 614
I +TEL SN+ F++ + ++ K H+S F+ G+VFS +
Sbjct: 864 IPILTELKNPSNIHFIE---------QMGGLDGMLKGTSLHLS----TSFSTGAVFSDTF 910
Query: 615 LDTLLYQAFVKDYVITFIRLLL 636
LD+LL +F +V+ +++L+
Sbjct: 911 LDSLLATSFYNYHVVELLQMLV 932
>sp|Q795M8|YUGO_BACSU Putative potassium channel protein YugO OS=Bacillus subtilis
(strain 168) GN=yugO PE=4 SV=2
Length = 328
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 44 NLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKL 103
++F+ ++ VVT STVGYGD+VP Q +++I + F L+ RQ
Sbjct: 44 SVFEGIWWAVVTVSTVGYGDYVPHTPLGQAAGILLILSGASFVTAYFATLSAAAFSRQH- 102
Query: 104 GGSYSSHRA--QSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMR 161
Y + + H+++ + ++ L A P + VVL+
Sbjct: 103 --RYIEGKVAYKGRDHIILIGWNEKTNRLLKDLQ--LAAP---SKTVVLID--------E 147
Query: 162 MILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWA 221
+ + P+ + V +I+G DG L RA + EAE+ + A Y +T AD ++L +
Sbjct: 148 SLTEGPL-IENVHFIRGHAADDGTLKRANITEAESVMI-TADQYKSETDADMLSVLTLLS 205
Query: 222 VKDFAP 227
VK P
Sbjct: 206 VKGLNP 211
>sp|Q9FWX6|TPK4_ARATH Two-pore potassium channel 4 OS=Arabidopsis thaliana GN=TPK4 PE=2
SV=2
Length = 284
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 16 ALSQQLMILSATF-VCGIQHFQ-RAGHRHLNLF-QATYYVVVTFSTVGYGDFVPDIWPSQ 72
L+ L+++ TF VC F+ + NLF A Y+ +VTFSTVGYGD VP ++
Sbjct: 36 VLAMILLLVYLTFGVCTYSFFRDQFSGTETNLFVDAFYFSIVTFSTVGYGDIVPSTSTTK 95
Query: 73 LYMVIMICVALIVL 86
+ ++++ ++ L
Sbjct: 96 ILTIVLVSTGVVFL 109
>sp|P31069|KCH_ECOLI Voltage-gated potassium channel Kch OS=Escherichia coli (strain
K12) GN=kch PE=1 SV=1
Length = 417
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 44 NLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQ----FEQLAFTWME 99
+L A Y+ + T STVGYGD VP ++L+ + +I + V T F L
Sbjct: 171 SLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMTSIFGPLIRGGFN 230
Query: 100 RQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTT 159
+ G +++ HR + H +VC ++ A + LN+ + V ++S + D
Sbjct: 231 KLVKGNNHTMHR---KDHFIVCGHSILAINTILQLNQ-------RGQNVTVISNLPEDDI 280
Query: 160 MRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRS 219
++ ++ I G L +A ++ A L SD A + +L
Sbjct: 281 KQLEQRL---GDNADVIPGDSNDSSVLKKAGIDRCRAILAL-----SDNDADNAFVVL-- 330
Query: 220 WAVKDFAPDVPQYVQIFRPE--NKLHVKFAEFIVCEDELKYALLAN--NCTCPGASTLVT 275
+ KD + DV + + + NK+ + + I+ +LA N LV+
Sbjct: 331 -SAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVS 389
Query: 276 LLLHTSRG 283
+LL++ G
Sbjct: 390 MLLNSGHG 397
>sp|Q8LBL1|TPK1_ARATH Two-pore potassium channel 1 OS=Arabidopsis thaliana GN=TPK1 PE=1
SV=2
Length = 363
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 17 LSQQLMILSATFVCGIQHF-----QRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPS 71
L + +M L+ G F Q +GH+ + A Y+ +VT +TVGYGD VP+ S
Sbjct: 76 LRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVVDALYFCIVTMTTVGYGDLVPNSSAS 135
Query: 72 QLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQS 114
+L + ++++ + A +E+Q+ + H QS
Sbjct: 136 RLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLVRAFHLRQS 178
>sp|Q58752|MJK2_METJA Probable potassium channel protein 2 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1357 PE=4 SV=1
Length = 343
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 43 LNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLA 94
++ F A Y+ V+T +T GYGDF P + + V+ +CV + ++ F +A
Sbjct: 31 VDYFTALYFSVITITTTGYGDFTPKTFLGRTLTVVYLCVGVGIVMYLFSLIA 82
>sp|Q8LIN5|KCO2_ORYSJ Two pore potassium channel b OS=Oryza sativa subsp. japonica
GN=TPKB PE=1 SV=1
Length = 349
Score = 40.0 bits (92), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 28 FVCGIQHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLP 87
F + H +G R A Y+ VVT +TVGYGD VP ++L + + V+
Sbjct: 83 FYLAMDHM--SGTRTTRALDALYFCVVTMTTVGYGDLVPASDAAKLLACAFVFAGVAVVG 140
Query: 88 TQFEQLAFTWMERQK 102
T + A +E+Q+
Sbjct: 141 TFLSKAADYLVEKQE 155
>sp|Q850M0|KCO1_ORYSJ Two pore potassium channel a OS=Oryza sativa subsp. japonica
GN=TPKA PE=1 SV=1
Length = 347
Score = 39.7 bits (91), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 38 AGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTW 97
+G R + A Y+ VVT +TVGYGD VP+ ++L + + + V+ ++A
Sbjct: 90 SGKRTNRVLDALYFCVVTMTTVGYGDLVPNNDTTKLLACAFVFMGMAVVALFVSKVADYL 149
Query: 98 MERQKL 103
+E+Q++
Sbjct: 150 VEKQEV 155
>sp|Q57604|MJK1_METJA Potassium channel protein 1 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=MJ0138.1 PE=4 SV=1
Length = 333
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 44 NLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWME 99
+ F A Y VVT STVGYGD+ P + +L ++I I + + +A ++E
Sbjct: 32 DFFTAFYTAVVTISTVGYGDYTPQTFLGKLSVIIYIFAGVGAVAYTMGNIASFFIE 87
>sp|Q23435|TWK9_CAEEL TWiK family of potassium channels protein 9 OS=Caenorhabditis
elegans GN=twk-9 PE=2 SV=2
Length = 568
Score = 37.7 bits (86), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 18 SQQLMILSATFVCGIQHFQRAGHR-------HLNLFQATYYVVVTFSTVGYGDFVPDIWP 70
+++ + L TF C + AG + ++ F+A Y+ VT +T+G GDFVP +
Sbjct: 313 TEESIALGITFTC----YLVAGAKILSVYEPEMDFFKALYFNFVTLTTIGLGDFVPKSFD 368
Query: 71 SQLYMVIMICVAL 83
L +I I + L
Sbjct: 369 YLLITLIYIGIGL 381
>sp|Q02006|Y4233_RHOPA Putative potassium channel protein RPA4233 OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=RPA4233 PE=3
SV=2
Length = 412
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 4 NDLHRAMQKSQSALSQQLMILS-ATFVCGIQHFQRAGHRHLNLF----QATYYVVVTFST 58
L ++ + AL L+IL+ AT V GH F A ++ +VT ST
Sbjct: 151 RSLLEVLESERRALMACLVILACATLVSATAMHIAEGHVQPEKFGTIPDAMWWAIVTLST 210
Query: 59 VGYGDFVPDIWPSQLYM-VIMIC-VALIVLPTQFEQLAFT 96
+GYGD VP ++ +IC + +I LP AF+
Sbjct: 211 IGYGDVVPATGIGRMVASATIICGLIMIALPVGIVANAFS 250
>sp|O14649|KCNK3_HUMAN Potassium channel subfamily K member 3 OS=Homo sapiens GN=KCNK3
PE=1 SV=1
Length = 394
Score = 36.6 bits (83), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 6 LHRA---MQKSQSALSQQLMILSATFVC------GIQHFQRAGHRHLNLFQATYYVVVTF 56
LHRA + ++ +S M+L F C G F + H FQA YY +T
Sbjct: 140 LHRAKKGLGMRRADVSMANMVLIGFFSCISTLCIGAAAFSH--YEHWTFFQAYYYCFITL 197
Query: 57 STVGYGDFV 65
+T+G+GD+V
Sbjct: 198 TTIGFGDYV 206
>sp|O27564|MTHK_METTH Calcium-gated potassium channel MthK OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=mthK PE=1 SV=1
Length = 336
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 50 YYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSS 109
Y+ VT +TVGYGD+ P + V +I + + E+L + R+++
Sbjct: 51 YWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLEFLINREQMKLMGLI 110
Query: 110 HRAQSEKHVVVCS 122
A+S +HVV+C
Sbjct: 111 DVAKS-RHVVICG 122
>sp|Q9QYU3|KCNG2_RAT Potassium voltage-gated channel subfamily G member 2 OS=Rattus
norvegicus GN=Kcng2 PE=2 SV=1
Length = 480
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 38 AGHRHLNLFQATYY-VVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVL 86
HR + A+Y+ V++ +TVGYGD VP P Q+ + I ++++
Sbjct: 361 GAHRDFSSVPASYWWAVISMTTVGYGDMVPRSLPGQVVALSSILSGILLM 410
>sp|Q9SVV6|TPK3_ARATH Two-pore potassium channel 3 OS=Arabidopsis thaliana GN=TPK3 PE=2
SV=1
Length = 436
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 4 NDLHRAMQK------SQSALSQQLMILSATFVCGIQ-HFQRAGHRHLN----LFQATYYV 52
NDLH +++ S+S + Q +L G+ ++ H +N + Y+
Sbjct: 131 NDLHHPIRQKDPTETSRSVVRQAFALLVVYLSLGVLIYWLNRDHYVVNQTHPVVDGLYFC 190
Query: 53 VVTFSTVGYGDFVPDIWPSQLYMVIMICVA 82
+VT T+GYGD P+ ++L+ ++ + V
Sbjct: 191 IVTMCTIGYGDITPNSVVTKLFSIMFVLVG 220
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 16 ALSQQLMILSATFVCGIQHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYM 75
AL+ +++L GI HF + + Y V++ +TVGYGD P +L+
Sbjct: 275 ALALGVVVLCIAVGVGIMHFIE----EIGWLDSFYLSVMSVTTVGYGDRAFKTLPGRLFA 330
Query: 76 VIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEKHVVVCST 123
I + V+ + + F LA ++++ +R +++K V+C T
Sbjct: 331 AIWLLVSTLAVARAFLYLAEARVDKR--------NRERAKK--VLCET 368
>sp|Q96PR1|KCNC2_HUMAN Potassium voltage-gated channel subfamily C member 2 OS=Homo
sapiens GN=KCNC2 PE=1 SV=1
Length = 638
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 33/179 (18%)
Query: 44 NLFQATYYVVVTFSTVGYGDFVPDIWPSQLY-------MVIMICVALIVLPTQFEQLAFT 96
N+ ++ VVT +T+GYGD P W L V+ I + + V+ F
Sbjct: 423 NIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSL 482
Query: 97 WMERQKLGGSYSSH--RAQSEKHVVVCSTTLH-------ADTIMDFLNEFYAHPLLQNYY 147
M +QKL H A C T L+ +DT + N LL++
Sbjct: 483 AMAKQKLPRKRKKHIPPAPQASSPTFCKTELNMACNSTQSDTCLGKDNR-----LLEHNR 537
Query: 148 VVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYS 206
VL D+T + P+ + I+ S +D + E CF+L +Y+
Sbjct: 538 SVLSGD---DSTGS---EPPLSPPERLPIRRSSTRD------KNRRGETCFLLTTGDYT 584
>sp|Q9NYG8|KCNK4_HUMAN Potassium channel subfamily K member 4 OS=Homo sapiens GN=KCNK4
PE=1 SV=2
Length = 393
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 9/53 (16%)
Query: 21 LMILSATFV-CGIQHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQ 72
L +L+ TFV C ++ + + +A Y+V+VT +TVG+GD+V P Q
Sbjct: 182 LFVLTPTFVFCYMEDWSK--------LEAIYFVIVTLTTVGFGDYVAGADPRQ 226
>sp|Q9LVI6|RLK90_ARATH Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana
GN=RLK902 PE=1 SV=1
Length = 647
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 406 DMSSIESPQPRE--SNPRPSAHKA-DAPPSKLTRLAFYSVEFYLFSLDDLLRAGILLAEN 462
+ +++E+P+ R + PSA KA + S + +L F+ +F L+DLLRA +
Sbjct: 314 EKAAVEAPENRSYVNEYSPSAVKAVEVNSSGMKKLVFFGNATKVFDLEDLLRA------S 367
Query: 463 VVVVNKELSNSAEEDTLADCNTIVAVQKLTSLAFYSVEF 501
V+ K +A + L D T+VAV++L + EF
Sbjct: 368 AEVLGKGTFGTAYKAVL-DAVTLVAVKRLKDVTMADREF 405
>sp|Q9FL25|TPK2_ARATH Two-pore potassium channel 2 OS=Arabidopsis thaliana GN=TPK2 PE=2
SV=1
Length = 443
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 45 LFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVA 82
+ A Y+ +VT T+GYGD PD ++L+ + + V
Sbjct: 179 VVDALYFCIVTMCTIGYGDITPDSVVTKLFSIFFVLVG 216
>sp|P22462|KCNC2_RAT Potassium voltage-gated channel subfamily C member 2 OS=Rattus
norvegicus GN=Kcnc2 PE=1 SV=1
Length = 638
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 33/179 (18%)
Query: 44 NLFQATYYVVVTFSTVGYGDFVPDIWPSQLY-------MVIMICVALIVLPTQFEQLAFT 96
N+ ++ VVT +T+GYGD P W L V+ I + + V+ F
Sbjct: 423 NIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSL 482
Query: 97 WMERQKLGGSYSSH--RAQSEKHVVVCSTTLH-------ADTIMDFLNEFYAHPLLQNYY 147
M +QKL H A C T L+ +DT + N LL++
Sbjct: 483 AMAKQKLPRKRKKHIPPAPLASSPTFCKTELNMACNSTQSDTCLGKENR-----LLEHNR 537
Query: 148 VVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYS 206
VL D+T + P+ + I+ S +D + E CF+L +Y+
Sbjct: 538 SVLSGD---DSTGS---EPPLSPPERLPIRRSSTRD------KNRRGETCFLLTTGDYT 584
>sp|Q14B80|KCNC2_MOUSE Potassium voltage-gated channel subfamily C member 2 OS=Mus
musculus GN=Kcnc2 PE=1 SV=1
Length = 642
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 33/179 (18%)
Query: 44 NLFQATYYVVVTFSTVGYGDFVPDIWPSQLY-------MVIMICVALIVLPTQFEQLAFT 96
N+ ++ VVT +T+GYGD P W L V+ I + + V+ F
Sbjct: 427 NIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSL 486
Query: 97 WMERQKLGGSYSSH--RAQSEKHVVVCSTTLH-------ADTIMDFLNEFYAHPLLQNYY 147
M +QKL H A C T L+ +DT + N LL++
Sbjct: 487 AMAKQKLPRKRKKHIPPAPLASSPTFCKTELNMACNSTQSDTCLGKENR-----LLEHNR 541
Query: 148 VVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYS 206
VL D+T + P+ + I+ S +D + E CF+L +Y+
Sbjct: 542 SVLSGD---DSTGS---EPPLSPPERLPIRRSSTRD------KNRRGETCFLLTTGDYT 588
>sp|O88454|KCNK4_MOUSE Potassium channel subfamily K member 4 OS=Mus musculus GN=Kcnk4
PE=2 SV=1
Length = 398
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 18/21 (85%)
Query: 46 FQATYYVVVTFSTVGYGDFVP 66
+A Y+V+VT +TVG+GD+VP
Sbjct: 201 LEAIYFVIVTLTTVGFGDYVP 221
>sp|O95279|KCNK5_HUMAN Potassium channel subfamily K member 5 OS=Homo sapiens GN=KCNK5
PE=1 SV=1
Length = 499
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 44 NLFQATYYVVVTFSTVGYGDFVPDIWPSQLY 74
N + YY +T ST+G+GDFV + PS Y
Sbjct: 189 NYIEGLYYSFITISTIGFGDFVAGVNPSANY 219
>sp|Q9YDF8|KVAP_AERPE Voltage-gated potassium channel OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=APE_0955 PE=1 SV=1
Length = 295
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 20 QLMILSATFVCGIQHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVP 66
L +L F I + ++F A ++ VVT +TVGYGD VP
Sbjct: 171 MLTVLYGAFAIYIVEYPDPNSSIKSVFDALWWAVVTATTVGYGDVVP 217
>sp|Q94A76|GORK_ARATH Potassium channel GORK OS=Arabidopsis thaliana GN=GORK PE=1 SV=2
Length = 820
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 26/114 (22%)
Query: 41 RHLNLFQ----ATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMIC-------------VAL 83
R ++L++ A Y+ +VT +TVGYGD ++++I + AL
Sbjct: 250 REIDLWKRYTTALYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMVLGAYLIGNITAL 309
Query: 84 IVLPTQFEQLA------FTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIM 131
IV + E+ ++M R+KLG R+Q HV + + + DT+M
Sbjct: 310 IVKGSNTERFRDKMNDLISFMNRKKLGRDL---RSQITGHVRLQYDSHYTDTVM 360
>sp|Q9UIX4|KCNG1_HUMAN Potassium voltage-gated channel subfamily G member 1 OS=Homo
sapiens GN=KCNG1 PE=2 SV=1
Length = 513
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 50 YYVVVTFSTVGYGDFVPDIWPSQLYMV--IMICVALIVLPTQ--FEQLAFTWMERQKLGG 105
++ V+T +TVGYGD VP P Q+ + I+ + L+ P F + +++E ++
Sbjct: 416 WWAVITMTTVGYGDMVPRSTPGQVVALSSILSGILLMAFPVTSIFHTFSRSYLELKQEQE 475
Query: 106 SYSSHRAQ 113
RAQ
Sbjct: 476 RVMFRRAQ 483
>sp|Q8CFS6|KCNV2_MOUSE Potassium voltage-gated channel subfamily V member 2 OS=Mus
musculus GN=Kcnv2 PE=2 SV=1
Length = 562
Score = 33.9 bits (76), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 39 GHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIV 85
G ++ A ++ V+ STVGYGD P+ +L+ + I +I+
Sbjct: 455 GTNFTSILHAWWWAAVSISTVGYGDMYPETHLGRLFAFLCIAFGIIL 501
>sp|O36360|DNBI_ALHV1 Major DNA-binding protein OS=Alcelaphine herpesvirus 1 (strain
C500) GN=6 PE=3 SV=1
Length = 1127
Score = 33.9 bits (76), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 498 SVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIRT 557
SVE Y+ ++ +L + VN L SA LA IV + + + GI
Sbjct: 886 SVEDYVNNVQNL---------KALTVNSSLRESAA--NLARSRPIVTLPVVVNKYTGIAG 934
Query: 558 ITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAG 607
+L QS+N+ + R DK L S KK++ Y+F P
Sbjct: 935 NAQLFQSANLGYFMGRGVDKNLLGDSLFVKKQQNSYMRKKYLFMTPLVGN 984
>sp|A2BDX4|KCNG1_MOUSE Potassium voltage-gated channel subfamily G member 1 OS=Mus
musculus GN=Kcng1 PE=3 SV=1
Length = 514
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 50 YYVVVTFSTVGYGDFVPDIWPSQLYMV--IMICVALIVLPTQ--FEQLAFTWMERQKLGG 105
++ V+T +TVGYGD VP P Q+ + I+ + L+ P F + +++E ++
Sbjct: 416 WWAVITMTTVGYGDMVPRSTPGQVVALSSILSGILLMAFPVTSIFHTFSRSYLELKQEQE 475
Query: 106 SYSSHRAQ 113
RAQ
Sbjct: 476 RVLIRRAQ 483
>sp|Q57603|MVP_METJA Hyperpolarization-activated voltage-gated potassium channel
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=mvp PE=1
SV=1
Length = 209
Score = 33.1 bits (74), Expect = 8.2, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 44 NLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQ 92
N F A Y+ ++ +TVGYGD P +L ++ + + L T ++
Sbjct: 156 NFFDAFYFTTISITTVGYGDITPKTDAGKLIIIFSVLFFISGLITSLQK 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,122,164
Number of Sequences: 539616
Number of extensions: 9717807
Number of successful extensions: 27018
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 26843
Number of HSP's gapped (non-prelim): 152
length of query: 695
length of database: 191,569,459
effective HSP length: 125
effective length of query: 570
effective length of database: 124,117,459
effective search space: 70746951630
effective search space used: 70746951630
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)