BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8622
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
Query: 18 LGSVHNTTRNPALVQVRTD-----------DSNLQCSVCWEQFTLDEAVRKLPCDHFYHT 66
LG + NT PA + T D L+C VC E +T++E VR+LPC+HF+H+
Sbjct: 193 LGQLENTGPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHS 252
Query: 67 PCIEPWLQLHGTCPICRQTLHSESA 91
CI PWL+LH TCP+CR++L+ E +
Sbjct: 253 SCIVPWLELHDTCPVCRKSLNGEDS 277
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 11/85 (12%)
Query: 18 LGSVHNTTRNPALVQVRTD-----------DSNLQCSVCWEQFTLDEAVRKLPCDHFYHT 66
LG + NT PA + T ++ L+C VC E +T++E VR+LPC+HF+H+
Sbjct: 194 LGQLENTGPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHS 253
Query: 67 PCIEPWLQLHGTCPICRQTLHSESA 91
CI PWL+LH TCP+CR++L+ E +
Sbjct: 254 SCIVPWLELHDTCPVCRKSLNGEDS 278
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 38 SNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPA 97
S L+C VC E +T+ E+VR+LPC+H +H CI PWL+ H TCP+CR++L ++ + P
Sbjct: 223 SGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNPPG 282
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 38 SNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPA 97
S L+C VC E +T+ E VR+LPC+H +H CI PWL+ H TCP+CR++L ++ + P
Sbjct: 224 SGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNPPG 283
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 40 LQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPA 97
L+C VC E +T+ E+VR+LPC+H +H CI PWL+ H TCP+CR++L ++ + P
Sbjct: 226 LECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNPPG 283
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 38 SNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPA 97
S L+C VC E + L E+VR+LPC+H +H CI PWL+ H +CP+CR++L ++ + P
Sbjct: 227 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATNPPG 286
Query: 98 GAG 100
G
Sbjct: 287 LTG 289
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 38 SNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPA 97
S L+C VC + + L E VR+LPC+H +H CI PWL+ H +CP+CR++L ++ + P
Sbjct: 228 SGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATDPPG 287
Query: 98 GAG 100
AG
Sbjct: 288 LAG 290
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 38 SNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESLGPA 97
S L+C VC + + L E VR+LPC+H +H CI PWL+ H +CP+CR++L ++ + P
Sbjct: 225 SGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATNPPG 284
Query: 98 GAG 100
G
Sbjct: 285 LTG 287
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 37 DSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHS 88
+ L CSVC EQ T+ E VR LPC H +H CI+PWL+ GTCP+C+ HS
Sbjct: 206 EDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFRAHS 257
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 37 DSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAE 92
D +C++C E F +++ V +LPC H++H CI+PWL+++GTC ICR + S +
Sbjct: 391 DEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDPNSQQ 446
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 24 TTRNPALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
TTR TD C+VC E + ++ VR LPC H +H C++PWL H TCP+C+
Sbjct: 246 TTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCK 305
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 24 TTRNPALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
TTR TD C+VC E + ++ VR LPC H +H C++PWL H TCP+C+
Sbjct: 246 TTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCK 305
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 40 LQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTLHSESA--ESLGP 96
L+C++C +F DE +R LP CDH +H CI+ WL+ H TCP+CR L + A ES+ P
Sbjct: 126 LECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEP 185
Query: 97 AG 98
G
Sbjct: 186 GG 187
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 24 TTRNPALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
TTR TD C+VC E + ++ VR LPC H +H C++PWL H TCP+C+
Sbjct: 246 TTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCK 305
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 29 ALVQVRTDDSNL-----QCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
AL V SNL QC+VC + F +++PC H YH C+ PWL+LH +CP+CR
Sbjct: 206 ALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCR 265
Query: 84 QTLHSESAE 92
L ++ +
Sbjct: 266 HELPTDDPD 274
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 41 QCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTL 86
CSVC + F L E VR LP C H +H PCI+ WL HG+CP+CR+ L
Sbjct: 190 SCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 32 QVRTDDSN---LQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTL 86
+VR D++ + CSVC + F + E VR LP C H +H PCI+ WL+ H +CP+CR+ L
Sbjct: 163 KVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 42 CSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTL 86
CSVC + F L E VR LP C H +H PCI+ WL HG+CP+CR+ +
Sbjct: 196 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
C+VC E F + + +R LPC H +H CI+PWL H TCP+C+
Sbjct: 265 CAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRTCPMCK 306
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
C+VC E F + + +R LPC H +H CI+PWL H TCP+C+
Sbjct: 269 CAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCK 310
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 42 CSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTLHSESA 91
CSVC +F +E++R LP C+H +H PCI+ WL+ H CP+CR + + SA
Sbjct: 159 CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSA 209
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 37 DSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAE 92
D+ L+C VC +F E VR+LPC+H +H+ CI PWL +CP+CR L ++S +
Sbjct: 74 DAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELPTDSPD 129
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 37 DSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAE 92
D ++C VC +F E+VR++PC H +HT CI PWL +CP+CR L +++A+
Sbjct: 74 DKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTDNAD 129
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%)
Query: 5 QHFFLVHHFSYSSLGSVHNTTRNPALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFY 64
Q F L G N A+ +D+ CSVC ++T +RKLPC H Y
Sbjct: 533 QFFLLNEDDDDQPRGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEY 592
Query: 65 HTPCIEPWLQLHGTCPICRQTL 86
H CI+ WL + TCPICR+ +
Sbjct: 593 HVHCIDRWLSENSTCPICRRAV 614
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 5 QHFFLVHHFSYSSLGSVHNTTRNPALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFY 64
Q F L G N A+ +D+ CSVC ++T +RKLPC H Y
Sbjct: 509 QFFLLNEDDEDQPRGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEY 568
Query: 65 HTPCIEPWLQLHGTCPICRQTLHS 88
H CI+ WL + TCPICR+ + S
Sbjct: 569 HVHCIDRWLSENSTCPICRRAVLS 592
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 40 LQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTLHSESAE 92
L+C++C +F DE +R LP CDH +H CI WLQ H TCP+CR L ++ E
Sbjct: 122 LECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPE 175
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 37 DSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSES 90
D+ L+C VC +F E VR+LPC+H +H+ CI PWL +CP+CR L ++S
Sbjct: 74 DAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPTDS 127
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 41 QCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSESAE 92
QC+VC ++F V+++PC H +H C+ PWL+LH +CP+CR L ++ +
Sbjct: 215 QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPD 266
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 36 DDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTL 86
+D+ CSVC ++T +RKLPC H YH CI+ WL + TCPICR+ +
Sbjct: 697 NDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAV 747
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
C +C+E++ ++ VR L C HF+H CI+PW+ HGTCPIC+
Sbjct: 256 CVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICK 297
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTL 86
C+VC E + ++ VR LPC H +H C++PWL H TCP+C+ +
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNI 322
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
C +C+E + +E VR L C HF+H CI+PW+ HGTCP+C+
Sbjct: 256 CVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCK 297
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 59.3 bits (142), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTL 86
C+VC E + ++ VR LPC H +H C++PWL H TCP+C+ +
Sbjct: 277 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNI 321
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
C +C+E + +E VR L C HF+H CI+PW+ HGTCP+C+
Sbjct: 256 CVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHGTCPMCK 297
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 59.3 bits (142), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
C+VC E + + VR L C+HF+H CI+PWL H TCP+C+
Sbjct: 260 CAVCIEPYKPSDVVRILTCNHFFHKNCIDPWLLEHRTCPMCK 301
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
C +C+E + ++ VR L C HF+H CI+PW+ HGTCPIC+
Sbjct: 256 CVICFEHYKPNDIVRILTCKHFFHKNCIDPWILSHGTCPICK 297
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTL 86
CSVC ++T +RKLPC H YH CI+ WL + TCPICR+ +
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAV 612
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 36 DDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTL 86
+D+ CSVC ++T +RKLPC H YH CI+ WL + TCPICR+ +
Sbjct: 579 NDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 629
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 41 QCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLHSE 89
+C +C E + + +++LPC H +H PC++PWL H +CPICR L ++
Sbjct: 229 ECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTD 277
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 33 VRTDDSNLQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTLHSESA 91
+R L+CSVC +F DE +R +P C H +H CI+ WL+ H TCP+CR L
Sbjct: 135 LRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPG 194
Query: 92 ESL 94
ES+
Sbjct: 195 ESI 197
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
C +C ++ E +LPC H++H PC+ WLQ GTCP+CR
Sbjct: 530 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 571
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQ 84
C +C ++ D+ +LPC HF+H PC+ WLQ GTCP+CR+
Sbjct: 633 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRR 675
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQ 84
C +C ++ D+ +LPC HF+H PC+ WLQ GTCP+CR+
Sbjct: 633 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRR 675
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQ 84
C +C ++ D+ +LPC HF+H PC+ WLQ GTCP+CR+
Sbjct: 634 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRR 676
>sp|Q5RBT7|RN139_PONAB E3 ubiquitin-protein ligase RNF139 OS=Pongo abelii GN=RNF139 PE=2
SV=1
Length = 664
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 28 PALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLH 87
P + R + N C++C+ +FT + R PC+H++H C+ WL + TCP+C Q ++
Sbjct: 533 PEIKGSRLQEINDVCAICYHEFT--TSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVY 590
Query: 88 SE 89
E
Sbjct: 591 IE 592
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQ 84
C +C ++ D+ +LPC HF+H PC+ WLQ GTCP+CR+
Sbjct: 634 CPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRR 676
>sp|Q8WU17|RN139_HUMAN E3 ubiquitin-protein ligase RNF139 OS=Homo sapiens GN=RNF139 PE=1
SV=1
Length = 664
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 28 PALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLH 87
P + R + N C++C+ +FT + R PC+H++H C+ WL + TCP+C Q ++
Sbjct: 533 PEIKGSRLQEINDVCAICYHEFT--TSARITPCNHYFHALCLRKWLYIQDTCPMCHQKVY 590
Query: 88 SE 89
E
Sbjct: 591 IE 592
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 40 LQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTLHSE 89
L+CSVC +F E +R LP C H +H CI+ WL+ H TCP+CR ++ E
Sbjct: 122 LECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIE 172
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 35 TDDSNLQ---CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
+D+ +L C++C E + + +R LPC H +H CI+PWL H TCP+C+
Sbjct: 293 SDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCK 344
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 40 LQCSVCWEQFTLDEAVRKLP-CDHFYHTPCIEPWLQLHGTCPICRQTLHSESAESL 94
L CSVC +F E +R LP C H +H CI+ WL+ H TCP+CR + E S+
Sbjct: 121 LDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSV 176
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,141,034
Number of Sequences: 539616
Number of extensions: 1382245
Number of successful extensions: 3469
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 3017
Number of HSP's gapped (non-prelim): 565
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)