RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy8622
(101 letters)
>gnl|CDD|222279 pfam13639, zf-RING_2, Ring finger domain.
Length = 46
Score = 59.3 bits (144), Expect = 1e-13
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 41 QCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQ 84
+C +C ++F E V LPC H +H C++ WL+ TCP+CR
Sbjct: 2 ECPICLDEFEPGEEVVVLPCGHVFHKECLDKWLRSSNTCPLCRA 45
>gnl|CDD|227827 COG5540, COG5540, RING-finger-containing ubiquitin ligase
[Posttranslational modification, protein turnover,
chaperones].
Length = 374
Score = 60.4 bits (146), Expect = 3e-12
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 15 YSSLGSVHNTTRNPAL-----VQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCI 69
YSS ++ TT +L + D ++C++C F ++ +R LPCDH +H C+
Sbjct: 294 YSSSEAIPTTTTKGSLKPLSIERAVEADKGVECAICMSNFIKNDRLRVLPCDHRFHVGCV 353
Query: 70 EPWLQLHG-TCPICRQTL 86
+ WL + CP+CR +
Sbjct: 354 DKWLLGYSNKCPVCRTAI 371
>gnl|CDD|238093 cd00162, RING, RING-finger (Really Interesting New Gene) domain,
a specialized type of Zn-finger of 40 to 60 residues
that binds two atoms of zinc; defined by the
'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)-
H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved
in mediating protein-protein interactions; identified
in a proteins with a wide range of functions such as
viral replication, signal transduction, and
development; has two variants, the C3HC4-type and a
C3H2C3-type (RING-H2 finger), which have different
cysteine/histidine pattern; a subset of RINGs are
associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H).
Length = 45
Score = 47.8 bits (114), Expect = 4e-09
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 41 QCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWL-QLHGTCPICRQTL 86
+C +C E+F E V LPC H + CI+ WL TCP+CR +
Sbjct: 1 ECPICLEEF--REPVVLLPCGHVFCRSCIDKWLKSGKNTCPLCRTPI 45
>gnl|CDD|206094 pfam13923, zf-C3HC4_2, Zinc finger, C3HC4 type (RING finger).
Length = 45
Score = 42.9 bits (101), Expect = 3e-07
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 38 SNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQ 84
L+C +C + + V PC H + CI +L+ CPICR
Sbjct: 1 EELECPICLDLLR--DPVVLTPCGHVFCRECILRYLKKKSKCPICRT 45
>gnl|CDD|227568 COG5243, HRD1, HRD ubiquitin ligase complex, ER membrane component
[Posttranslational modification, protein turnover,
chaperones].
Length = 491
Score = 45.7 bits (108), Expect = 5e-07
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 12 HFSYSSLGSVHNTTRNPALVQVRTDDSNLQCSVCWEQF----------TLDEAVRKLPCD 61
H + N A + T+ C++C ++ LD ++LPC
Sbjct: 261 HARFRRATKDLNAMYPTATEEQLTNSDRT-CTICMDEMFHPDHEPLPRGLDMTPKRLPCG 319
Query: 62 HFYHTPCIEPWLQLHGTCPICRQTL 86
H H C++ WL+ TCPICR+ +
Sbjct: 320 HILHLHCLKNWLERQQTCPICRRPV 344
>gnl|CDD|214546 smart00184, RING, Ring finger. E3 ubiquitin-protein ligase
activity is intrinsic to the RING domain of c-Cbl and
is likely to be a general function of this domain;
Various RING fingers exhibit binding activity towards
E2 ubiquitin-conjugating enzymes (Ubc' s).
Length = 40
Score = 38.6 bits (90), Expect = 1e-05
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHG-TCPIC 82
C +C E++ + LPC H + CI WL+ TCPIC
Sbjct: 1 CPICLEEY--LKDPVILPCGHTFCRSCIRKWLESGNNTCPIC 40
>gnl|CDD|227544 COG5219, COG5219, Uncharacterized conserved protein, contains RING
Zn-finger [General function prediction only].
Length = 1525
Score = 40.8 bits (95), Expect = 3e-05
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 10/51 (19%)
Query: 41 QCSVCWEQFTLDEAVRKLP------CDHFYHTPCIEPWLQLHG--TCPICR 83
+C++C+ LD R LP C + +HT C+ W CP+CR
Sbjct: 1471 ECAICY--SVLDMVDRSLPSKRCATCKNKFHTRCLYKWFASSARSNCPLCR 1519
>gnl|CDD|221705 pfam12678, zf-rbx1, RING-H2 zinc finger. There are 8 cysteine/
histidine residues which are proposed to be the
conserved residues involved in zinc binding. The
protein, of which this domain is the conserved region,
participates in diverse functions relevant to
chromosome metabolism and cell cycle control.
Length = 73
Score = 38.6 bits (90), Expect = 3e-05
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 11/43 (25%)
Query: 41 QCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICR 83
C V W C H +H CI WL+ TCP+CR
Sbjct: 42 DCPVVW-----------GECGHAFHLHCISRWLKTRNTCPLCR 73
>gnl|CDD|233043 TIGR00599, rad18, DNA repair protein rad18. All proteins in this
family for which functions are known are involved in
nucleotide excision repair.This family is based on the
phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis,
Stanford University) [DNA metabolism, DNA replication,
recombination, and repair].
Length = 397
Score = 38.1 bits (88), Expect = 2e-04
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 23 NTTRNPALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPIC 82
TT P+L + D++L+C +C + F + C H + + CI L CP+C
Sbjct: 13 LTTPIPSLYPL---DTSLRCHICKDFF---DVPVLTSCSHTFCSLCIRRCLSNQPKCPLC 66
Query: 83 RQT 85
R
Sbjct: 67 RAE 69
>gnl|CDD|227521 COG5194, APC11, Component of SCF ubiquitin ligase and
anaphase-promoting complex [Posttranslational
modification, protein turnover, chaperones / Cell
division and chromosome partitioning].
Length = 88
Score = 36.4 bits (84), Expect = 3e-04
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 60 CDHFYHTPCIEPWLQLHGTCPICRQT 85
C+H +H CI WL G CP+ RQT
Sbjct: 54 CNHAFHDHCIYRWLDTKGVCPLDRQT 79
>gnl|CDD|128780 smart00504, Ubox, Modified RING finger domain. Modified RING
finger domain, without the full complement of
Zn2+-binding ligands. Probable involvement in
E2-dependent ubiquitination.
Length = 63
Score = 35.3 bits (82), Expect = 5e-04
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 68 CIEPWLQLHGTCPICRQTLHSES 90
IE WL HGT P+ Q L E
Sbjct: 27 AIEKWLLSHGTDPVTGQPLTHED 49
>gnl|CDD|227719 COG5432, RAD18, RING-finger-containing E3 ubiquitin ligase
[Signal transduction mechanisms].
Length = 391
Score = 36.6 bits (84), Expect = 7e-04
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 23 NTTRNPALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPIC 82
N T+ P+L + DS L+C +C + + C H + + CI L CP+C
Sbjct: 12 NQTKIPSLKGL---DSMLRCRICDCRI---SIPCETTCGHTFCSLCIRRHLGTQPFCPVC 65
Query: 83 R 83
R
Sbjct: 66 R 66
>gnl|CDD|215715 pfam00097, zf-C3HC4, Zinc finger, C3HC4 type (RING finger). The
C3HC4 type zinc-finger (RING finger) is a cysteine-rich
domain of 40 to 60 residues that coordinates two zinc
ions, and has the consensus sequence:
C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C
where X is any amino acid. Many proteins containing a
RING finger play a key role in the ubiquitination
pathway.
Length = 40
Score = 33.2 bits (76), Expect = 0.001
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 42 CSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQL-HGTCPIC 82
C +C E + V LPC H + + CI WL+ + TCP+C
Sbjct: 1 CPICLE--EPKDPVTILPCGHLFCSKCILSWLESGNVTCPLC 40
>gnl|CDD|222944 PHA02929, PHA02929, N1R/p28-like protein; Provisional.
Length = 238
Score = 34.0 bits (78), Expect = 0.005
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 41 QCSVCWEQFTLDEAVRK-----LP-CDHFYHTPCIEPWLQLHGTCPICRQTLHS 88
+C++C E+ D+ ++ L C+H + CI+ W + TCP+CR S
Sbjct: 176 ECAICMEK-VYDKEIKNMYFGILSNCNHVFCIECIDIWKKEKNTCPVCRTPFIS 228
>gnl|CDD|193335 pfam12861, zf-Apc11, Anaphase-promoting complex subunit 11
RING-H2 finger. Apc11 is one of the subunits of the
anaphase-promoting complex or cyclosome. The APC
subunits are cullin family proteins with ubiquitin
ligase activity. Polyubiquitination marks proteins for
degradation by the 26S proteasome and is carried out by
a cascade of enzymes that includes ubiquitin-activating
enzymes (E1s), ubiquitin-conjugating enzymes (E2s), and
ubiquitin ligases (E3s). Apc11 acts as an E3 enzyme and
is responsible for recruiting E2s to the APC and for
mediating the subsequent transfer of ubiquitin to APC
substrates in vivo. In Saccharomyces cerevisiae this
RING-H2 finger protein defines the minimal ubiquitin
ligase activity of the APC, and the integrity of the
RING-H2 finger is essential for budding yeast cell
viability.
Length = 85
Score = 32.1 bits (73), Expect = 0.010
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 60 CDHFYHTPCIEPWLQ---LHGTCPICRQT 85
C H +H CI WL G CP+CRQT
Sbjct: 52 CKHNFHMHCILKWLATETSKGLCPMCRQT 80
>gnl|CDD|130848 TIGR01788, Glu-decarb-GAD, glutamate decarboxylase. This model
represents the pyridoxal phosphate-dependent glutamate
(alpha) decarboxylase found in bacteria (low and hi-GC
gram positive, proteobacteria and cyanobacteria),
plants, fungi and at least one archaon (Methanosarcina).
The product of the enzyme is gamma-aminobutyrate (GABA).
Length = 431
Score = 30.8 bits (70), Expect = 0.090
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Query: 35 TDDSNLQCS----VCWEQFT--LDEAVRKLPCDHFYHT 66
TD NL VCWE+F D +R++P D +
Sbjct: 136 TDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYV 173
>gnl|CDD|222878 PHA02562, 46, endonuclease subunit; Provisional.
Length = 562
Score = 29.2 bits (66), Expect = 0.29
Identities = 6/28 (21%), Positives = 7/28 (25%), Gaps = 9/28 (32%)
Query: 62 HFYHTPCIEPWLQLHGTCPICRQTLHSE 89
Y G CP C Q +
Sbjct: 279 KMYEK---------GGVCPTCTQQISEG 297
>gnl|CDD|226583 COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA
uptake (late competence protein) [DNA replication,
recombination, and repair].
Length = 441
Score = 29.0 bits (65), Expect = 0.37
Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 1 MKTKQHFFLVHHFSYSSLGSVHNTTRNPALVQVRTDDSNLQCSVCWEQFTLDEAVRKLPC 60
M T Q F S + + ++ +C+ C ++ KLPC
Sbjct: 1 MITNQDFLAGRLLLESEVPEEFKQNLAITEPSIIIENGKYRCNRC-GNTHIELFA-KLPC 58
Query: 61 DHFYHTPCI 69
Y C+
Sbjct: 59 GCLYCRNCL 67
>gnl|CDD|224589 COG1675, TFA1, Transcription initiation factor IIE, alpha subunit
[Transcription].
Length = 176
Score = 28.5 bits (64), Expect = 0.45
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 19/61 (31%)
Query: 35 TDDSNLQCSVCWEQFTLDEAVRKLPCDHFYHTPCIEPWLQLHGTCPICRQTLH-SESAES 93
T+++ C C +++ DEA+ +L TCP C + L +S+E
Sbjct: 109 TENNYYVCPNCHVKYSFDEAM------------------ELGFTCPKCGEDLEEYDSSEE 150
Query: 94 L 94
+
Sbjct: 151 I 151
>gnl|CDD|215870 pfam00345, Pili_assembly_N, Gram-negative pili assembly
chaperone, N-terminal domain. C2 domain-like
beta-sandwich fold.
Length = 117
Score = 27.5 bits (62), Expect = 0.70
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 20 SVHNTTRNPALVQVRTDDSN 39
+V NT P LVQ DD +
Sbjct: 21 TVSNTGDYPYLVQSWVDDGD 40
>gnl|CDD|222135 pfam13445, zf-RING_LisH, RING-type zinc-finger, LisH dimerisation
motif. This zinc-finger is the dimerisation motif for
LisH proteins, and is also a typical RING-type of plant
ubiquitin ligases.
Length = 55
Score = 26.5 bits (59), Expect = 0.80
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 37 DSNLQCSVCWEQFTLDEAV-RKLPCDHFYHTPCIEPWLQLHGT--CPI 81
S C + E T +E LPC H Y +E + G CP
Sbjct: 8 HSIFVCPISKEVMTDEENPPVMLPCGHVYSRKALEKLAKNGGKFKCPY 55
>gnl|CDD|222454 pfam13920, zf-C3HC4_3, Zinc finger, C3HC4 type (RING finger).
Length = 49
Score = 25.8 bits (57), Expect = 1.2
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 38 SNLQCSVCWEQFTLDEAVRKLPCDHF-YHTPCIEPWLQLHGTCPICRQ 84
+ C +C E+ V LPC H C + L+ CPICRQ
Sbjct: 1 EDDLCVICLER---PRNVVFLPCGHLCLCEECAK-RLRSKKKCPICRQ 44
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed.
Length = 874
Score = 27.0 bits (61), Expect = 1.9
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 6/22 (27%)
Query: 42 CSVCW--EQFTLDE----AVRK 57
S W E+FT+DE AVR+
Sbjct: 136 ASCDWSRERFTMDEGLSKAVRE 157
>gnl|CDD|204746 pfam11793, FANCL_C, FANCL C-terminal domain. This domain is
found at the C-terminus of the Fancl protein in humans
which is the putative E3 ubiquitin ligase subunit of
the FA complex (Fanconi anaemia). Eight subunits of the
Fanconi anaemia gene products form a multisubunit
nuclear complex which is required for
mono-ubiquitination of a downstream FA protein, FANCD2.
Length = 70
Score = 25.8 bits (57), Expect = 2.1
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 16/68 (23%)
Query: 40 LQCSVCWEQFTLDEAVRKLPCDH-----FYHTPCIEPWLQ-----------LHGTCPICR 83
++C +C+ + + CD+ +H C+ WL+ GTCP C+
Sbjct: 3 IECGICYAYRLDGGEIPDISCDNPKCGLPFHIACLYEWLRTLRDSRQSFNVSFGTCPYCK 62
Query: 84 QTLHSESA 91
+ + +
Sbjct: 63 AKISVKFS 70
>gnl|CDD|234716 PRK00292, glk, glucokinase; Provisional.
Length = 316
Score = 26.7 bits (60), Expect = 2.5
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 75 LHGTCPICRQTL 86
L G+CP+CR+TL
Sbjct: 223 LAGSCPLCRRTL 234
>gnl|CDD|221952 pfam13166, AAA_13, AAA domain. This family of domains contain a
P-loop motif that is characteristic of the AAA
superfamily. Many of the proteins in this family are
conjugative transfer proteins. This family includes the
PrrC protein that is thought to be the active component
of the anticodon nuclease.
Length = 713
Score = 26.1 bits (58), Expect = 3.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 76 HGTCPICRQTLHSESAESL 94
TCP C+QT+ E L
Sbjct: 254 GDTCPFCQQTITEERKAEL 272
>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like.
This group contains proteins identified as alcohol
dehydrogenases and glutathione-dependant formaldehyde
dehydrogenases (FDH) of the zinc-dependent/medium chain
alcohol dehydrogenase family. The MDR family uses
NAD(H) as a cofactor in the interconversion of alcohols
and aldehydes, or ketones. FDH converts formaldehyde
and NAD to formate and NADH. The initial step in this
process the spontaneous formation of a
S-(hydroxymethyl)glutathione adduct from formaldehyde
and glutathione, followed by FDH-mediated oxidation (and
detoxification) of the adduct to S-formylglutathione.
The medium chain alcohol dehydrogenase family (MDR) has
a NAD(P)(H)-binding domain in a Rossmann fold of a
beta-alpha form. The N-terminal region typically has an
all-beta catalytic domain. These proteins typically form
dimers (typically higher plants, mammals) or tetramers
(yeast, bacteria), and have 2 tightly bound zinc atoms
per subunit.
Length = 345
Score = 25.7 bits (57), Expect = 4.4
Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 77 GTCPICRQTLHSESAESLGPAGAG 100
GTCP CR + S G GA
Sbjct: 90 GTCPFCRAGFTT-SCVHGGFWGAF 112
>gnl|CDD|217185 pfam02685, Glucokinase, Glucokinase. This is a family of
glucokinases or glucose kinases EC:2.7.1.2. These
enzymes phosphorylate glucose using ATP as a donor to
give glucose-6-phosphate and ADP.
Length = 316
Score = 25.6 bits (57), Expect = 4.4
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 75 LHGTCPICRQTL 86
L G P+ R+ L
Sbjct: 223 LAGDDPLAREAL 234
>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled
Receptor Kinase 4-like Protein Serine/Threonine Kinases.
Serine/Threonine Kinases (STKs), G protein-coupled
Receptor Kinase (GRK) subfamily, GRK4-like group,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The GRK subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. GRKs
phosphorylate and regulate G protein-coupled receptors
(GPCRs), the largest superfamily of cell surface
receptors which regulate some part of nearly all
physiological functions. Phosphorylated GPCRs bind to
arrestins, which prevents further G protein signaling
despite the presence of activating ligand. There are
seven types of GRKs, named GRK1 to GRK7. Members of the
GRK4-like group include GRK4, GRK5, GRK6, and similar
GRKs. GRKs in this group contain an N-terminal RGS
homology (RH) domain and a catalytic domain, but lack a
G protein betagamma-subunit binding domain. They are
localized to the plasma membrane through
post-translational lipid modification or direct binding
to PIP2.
Length = 285
Score = 25.2 bits (55), Expect = 6.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 81 ICRQTLHSESAESLGPAGAG 100
ICRQ L + LG G G
Sbjct: 235 ICRQLLTKDPGFRLGCRGEG 254
>gnl|CDD|129832 TIGR00749, glk, glucokinase, proteobacterial type. This model
represents glucokinase of E. coli and close homologs,
mostly from other proteobacteria, presumed to have
equivalent function. This glucokinase is more closely
related to a number of uncharacterized paralogs than to
the glucokinase glcK (fromerly yqgR) of Bacillus
subtilis and its closest homologs, so the two sets are
represented by separate models [Energy metabolism,
Glycolysis/gluconeogenesis].
Length = 316
Score = 25.2 bits (55), Expect = 6.7
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 75 LHGTCPICRQTL 86
L G+C CR+ L
Sbjct: 229 LAGSCTDCRRAL 240
>gnl|CDD|220669 pfam10272, Tmpp129, Putative transmembrane protein precursor. This
is a family of proteins conserved from worms to humans.
The proteins are purported to be transmembrane
protein-precursors but the function is unknown.
Length = 356
Score = 25.1 bits (55), Expect = 7.2
Identities = 7/16 (43%), Positives = 7/16 (43%)
Query: 70 EPWLQLHGTCPICRQT 85
E WL CP CR
Sbjct: 332 ETWLSSKCPCPTCRAK 347
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.322 0.134 0.449
Gapped
Lambda K H
0.267 0.0768 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 4,705,191
Number of extensions: 349902
Number of successful extensions: 310
Number of sequences better than 10.0: 1
Number of HSP's gapped: 306
Number of HSP's successfully gapped: 37
Length of query: 101
Length of database: 10,937,602
Length adjustment: 67
Effective length of query: 34
Effective length of database: 7,965,884
Effective search space: 270840056
Effective search space used: 270840056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.1 bits)