BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8623
(68 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
Length = 3563
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SASDPDCGVNAMVNYTLGE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 627 ILKISASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDFEKRSSYEFPVIA 686
Query: 61 TDRG 64
TDRG
Sbjct: 687 TDRG 690
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+++ASD D GVNA + Y+L F + S SG I LD E ++SY F VVATD
Sbjct: 1972 QITASDADLGVNARLVYSLANESQW--QFAIDSSSGLITTIGKLDRELQASYSFMVVATD 2029
Query: 63 RGK 65
G+
Sbjct: 2030 GGR 2032
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 302 VLQVYASDTDADENGLVEYAINRRQSDKEKMFRIDPRTGAIYINKPLDFETKELHELVVV 361
Query: 60 ATDRGKE 66
A D G++
Sbjct: 362 AKDHGEQ 368
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+D D G NA V Y+L + S F + V+GEI + LD E R YE V A D+
Sbjct: 1171 VTATDLDLGENAAVRYSLLTANSS---FQVHPVTGEISTREPLDRELREMYELIVEARDQ 1227
Query: 64 G 64
G
Sbjct: 1228 G 1228
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 1 MLRVSASDPDCGVNAMVNY----------TLGESPSRTNHFYMKSVSGEICIAQDLDFES 50
+++V+ASD D G NA + Y T S HF + SG I + LD E+
Sbjct: 1052 IIQVNASDLDTGNNARITYRIVDAGVDNVTTSSSSDVAQHFGIFPNSGWIYLRALLDRET 1111
Query: 51 RSSYEFPVVATDRG 64
R Y+ V+ATD G
Sbjct: 1112 RDRYQLTVLATDNG 1125
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G N V Y+L G++ + F + +G + +Q L ES + V+
Sbjct: 2075 LLKVQAHDEDLGANGEVTYSLKGDASGISGKFRINPSTGALSASQSLASESGKLLQLEVI 2134
Query: 60 ATDRG 64
A D+G
Sbjct: 2135 ARDKG 2139
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N++++Y+L E+P + F + S +G I +D E+ + V+
Sbjct: 520 VLQVLAHDRDEGLNSVISYSLAETPETHAQWFQIDSQTGLITTRSHIDCETEPVPQLTVI 579
Query: 60 ATDRG 64
A D G
Sbjct: 580 ARDGG 584
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH---FYMKSVSGEICIAQDLDFESRSSYEFP 57
+ R ASD D G +NY++G +PS + F + V+G + D+E R Y+
Sbjct: 2888 VFRAQASDLDRGPFGQLNYSIGPAPSDESSWKLFRVDPVTGLMTSDAVFDYEQRQRYDLQ 2947
Query: 58 VVATDRG 64
+ A+D G
Sbjct: 2948 LEASDMG 2954
>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
Length = 3586
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYTLGE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 629 ILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 688
Query: 61 TDRG 64
TDRG
Sbjct: 689 TDRG 692
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ A+D D GVNA + Y+L F + S SG I LD E +SSY F V+A
Sbjct: 1978 VVRIKATDADLGVNARLVYSLANETQW--QFAIDSKSGLITTVGKLDRELQSSYSFMVLA 2035
Query: 61 TDRGK 65
TD G+
Sbjct: 2036 TDGGR 2040
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 304 VLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAIFINKALDFETKELHELVVV 363
Query: 60 ATDRGKE 66
A D G++
Sbjct: 364 AKDHGEQ 370
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A D D G NA V Y+L + S F + V+GEI + LD E R+ Y+ V A D+
Sbjct: 1175 VAARDLDLGENAAVRYSLLPANSS---FQVHPVTGEISTREPLDRELRALYDLVVEARDQ 1231
Query: 64 G 64
G
Sbjct: 1232 G 1232
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--------------GESPSRTNHFYMKSVSGEICIAQDL 46
+++V+A+D D G NA + Y + G S HF + SG I + L
Sbjct: 1052 IVQVNATDLDTGNNARITYRIVDAGADNATAPAAAGGSSDVALHFGIFPNSGWIYLRAPL 1111
Query: 47 DFESRSSYEFPVVATDRG 64
D E+R Y+ ++ATD G
Sbjct: 1112 DRETRDRYQLVILATDNG 1129
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N++++Y L E+P + F + +G I +D E+ + V+
Sbjct: 522 VLQVLAHDRDEGLNSVLSYALAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVI 581
Query: 60 ATDRGK 65
A D G+
Sbjct: 582 ARDGGQ 587
>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
Length = 1812
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYTLGE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 619 ILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 678
Query: 61 TDRG 64
TDRG
Sbjct: 679 TDRG 682
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 294 VLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAIFINKALDFETKELHELVVV 353
Query: 60 ATDRGKE 66
A D G++
Sbjct: 354 AKDHGEQ 360
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A D D G NA + Y+L + S F + V+GEI + LD E R+ Y+ V A D+
Sbjct: 1165 VAARDLDLGENAAIRYSLLPANS---SFQVHPVTGEISTREPLDRELRALYDLVVEARDQ 1221
Query: 64 G 64
G
Sbjct: 1222 G 1222
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--------------GESPSRTNHFYMKSVSGEICIAQDL 46
+++V+A+D D G NA + Y + G S HF + SG I + L
Sbjct: 1042 IVQVNATDLDTGNNARITYRIVDAGADNATAPAAAGGSSDVALHFGIFPNSGWIYLRAPL 1101
Query: 47 DFESRSSYEFPVVATDRG 64
D E+R Y+ ++ATD G
Sbjct: 1102 DRETRDRYQLVILATDNG 1119
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N++++Y L E+P + F + +G I +D E+ + V+
Sbjct: 512 VLQVLAHDRDEGLNSVLSYALAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVI 571
Query: 60 ATDRGK 65
A D G+
Sbjct: 572 ARDGGQ 577
>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
Length = 3038
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYT+GE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 630 ILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 689
Query: 61 TDRG 64
TDRG
Sbjct: 690 TDRG 693
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA D D GVNA + Y+L F + S SG I LD E ++SY F V+A
Sbjct: 1988 VVQISAVDADLGVNARLVYSLANETQW--QFAIDSQSGLITTVGKLDRELQASYNFMVLA 2045
Query: 61 TDRGK 65
TD G+
Sbjct: 2046 TDGGR 2050
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 305 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVV 364
Query: 60 ATDRGKE 66
A D G++
Sbjct: 365 AKDHGEQ 371
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----------SPSRTNHFYMKSVSGEICIAQDLDFE 49
+++V+ASD D G NA + Y + + S + HF + SG I + LD E
Sbjct: 1055 IIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRE 1114
Query: 50 SRSSYEFPVVATDRG 64
+R Y+ V+ATD G
Sbjct: 1115 ARDRYQLTVLATDNG 1129
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L S F + V+GEI + LD E R Y+ V A D+
Sbjct: 1175 VTASDLDLGENAAIRYSLLPINS---SFQVHPVTGEISTREPLDRELRELYDLVVEARDQ 1231
Query: 64 G 64
G
Sbjct: 1232 G 1232
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYM---KSVSGEICIAQDLDFESRSSYEFP 57
+ R ASD D G +NY++G PS + + M S SG + A D+E R Y+
Sbjct: 2898 VFRAHASDLDKGPFGQLNYSIGPVPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDME 2957
Query: 58 VVATDRG 64
++A+D G
Sbjct: 2958 LLASDMG 2964
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G NA + Y+L E+ + + F + +G + +Q L ES VV
Sbjct: 2093 LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVV 2152
Query: 60 ATDRGKETQ 68
A D+G Q
Sbjct: 2153 ARDKGTPPQ 2161
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G + V Y+L + S F + + SG + ++Q LD+ES + V ATD G
Sbjct: 955 AHDKDSGSSGQVTYSLVKD-SGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGG 1012
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N+ + Y+L E+P + F + +G I +D E+ + VV
Sbjct: 523 VLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVV 582
Query: 60 ATDRG 64
A D G
Sbjct: 583 ARDGG 587
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D G NA + Y++ + N F + S SGE+ A+ LD E S Y + A+DR
Sbjct: 1886 VVASDLDEGPNADLIYSITGG-NLGNKFSIDSRSGELS-ARPLDREQNSRYTLQIQASDR 1943
Query: 64 GK 65
G+
Sbjct: 1944 GQ 1945
>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
Length = 3503
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYT+GE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 577 ILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 636
Query: 61 TDRG 64
TDRG
Sbjct: 637 TDRG 640
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 252 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVV 311
Query: 60 ATDRGKE 66
A D G++
Sbjct: 312 AKDHGEQ 318
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA D D GVNA + Y+L F + SG I LD E ++SY F V+A
Sbjct: 1918 VVQISAVDADLGVNARLVYSLANETQW--QFAIDGQSGLITTVGKLDRELQASYNFMVLA 1975
Query: 61 TDRGK 65
TD G+
Sbjct: 1976 TDGGR 1980
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFP 57
+ R ASD D G +NY++G +PS + + M V SG + A D+E R Y+
Sbjct: 2828 VFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFQVDSESGLVTSAFVFDYEQRQRYDME 2887
Query: 58 VVATDRG 64
++A+D G
Sbjct: 2888 LLASDMG 2894
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----------SPSRTNHFYMKSVSGEICIAQDLDFE 49
+++V+ASD D G NA + Y + + S + HF + SG I + LD E
Sbjct: 1002 IIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRE 1061
Query: 50 SRSSYEFPVVATDRG 64
+R Y+ ++ATD G
Sbjct: 1062 TRDRYQLTILATDNG 1076
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L S F + V+GEI + LD E R Y+ V A D+
Sbjct: 1122 VTASDLDLGENAAIRYSLLPINSS---FQVHPVTGEISTREPLDRELRELYDLVVEARDQ 1178
Query: 64 G 64
G
Sbjct: 1179 G 1179
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G NA + Y+L E+ + + F + +G + +Q L ES VV
Sbjct: 2023 LLKVQAIDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVV 2082
Query: 60 ATDRGKETQ 68
A D+G Q
Sbjct: 2083 ARDKGNPPQ 2091
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G + V Y+L + S F + + SG + ++Q LD+ES + V ATD G
Sbjct: 902 AHDKDSGSSGQVTYSLVKE-SGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGG 959
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D G NA + Y++ + N F + S SGE+ A+ LD E S Y + A+DR
Sbjct: 1816 VVASDLDEGPNADLIYSITGG-NLGNKFSIDSSSGELS-ARPLDREQHSRYTLQIQASDR 1873
Query: 64 GK 65
G+
Sbjct: 1874 GQ 1875
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N+ + Y+L E+P + F + +G I +D E+ + VV
Sbjct: 470 VLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVV 529
Query: 60 ATDRG 64
A D G
Sbjct: 530 ARDGG 534
>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
Length = 3556
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYT+GE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 630 ILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 689
Query: 61 TDRG 64
TDRG
Sbjct: 690 TDRG 693
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 305 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVV 364
Query: 60 ATDRGKE 66
A D G++
Sbjct: 365 AKDHGEQ 371
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA D D GVNA + Y+L F + SG I LD E ++SY F V+A
Sbjct: 1971 VVQISAVDADLGVNARLVYSLANETQW--QFAIDGQSGLITTVGKLDRELQASYNFMVLA 2028
Query: 61 TDRGK 65
TD G+
Sbjct: 2029 TDGGR 2033
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYM---KSVSGEICIAQDLDFESRSSYEFP 57
+ R ASD D G +NY++G +PS + + M S SG + A D+E R Y+
Sbjct: 2881 VFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDME 2940
Query: 58 VVATDRG 64
++A+D G
Sbjct: 2941 LLASDMG 2947
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----------SPSRTNHFYMKSVSGEICIAQDLDFE 49
+++V+ASD D G NA + Y + + S + HF + SG I + LD E
Sbjct: 1055 IIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRE 1114
Query: 50 SRSSYEFPVVATDRG 64
+R Y+ V+ATD G
Sbjct: 1115 TRDRYQLTVLATDNG 1129
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L S F + V+GEI + LD E R Y+ V A D+
Sbjct: 1175 VTASDLDLGENAAIRYSLLPINSS---FQVHPVTGEISTREPLDRELRELYDLVVEARDQ 1231
Query: 64 G 64
G
Sbjct: 1232 G 1232
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G NA + Y+L E+ + + F + +G + +Q L ES VV
Sbjct: 2076 LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVV 2135
Query: 60 ATDRGKETQ 68
A D+G Q
Sbjct: 2136 ARDKGNPPQ 2144
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G + V Y+L + S F + + SG + ++Q LD+ES + V ATD G
Sbjct: 955 AHDKDSGSSGQVTYSLVKE-SGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGG 1012
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D G NA + Y++ + N F + S SGE+ A+ LD E S Y + A+DR
Sbjct: 1869 VVASDLDEGPNADLIYSITGG-NLGNKFSIDSSSGELS-ARPLDREQHSRYTLQIQASDR 1926
Query: 64 GK 65
G+
Sbjct: 1927 GQ 1928
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N+ + Y+L E+P + F + +G I +D E+ + VV
Sbjct: 523 VLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVV 582
Query: 60 ATDRG 64
A D G
Sbjct: 583 ARDGG 587
>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
Precursor
Length = 3503
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYT+GE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 577 ILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 636
Query: 61 TDRG 64
TDRG
Sbjct: 637 TDRG 640
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 252 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVV 311
Query: 60 ATDRGKE 66
A D G++
Sbjct: 312 AKDHGEQ 318
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA D D GVNA + Y+L F + SG I LD E ++SY F V+A
Sbjct: 1918 VVQISAVDADLGVNARLVYSLANETQW--QFAIDGQSGLITTVGKLDRELQASYNFMVLA 1975
Query: 61 TDRGK 65
TD G+
Sbjct: 1976 TDGGR 1980
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYM---KSVSGEICIAQDLDFESRSSYEFP 57
+ R ASD D G +NY++G +PS + + M S SG + A D+E R Y+
Sbjct: 2828 VFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDME 2887
Query: 58 VVATDRG 64
++A+D G
Sbjct: 2888 LLASDMG 2894
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----------SPSRTNHFYMKSVSGEICIAQDLDFE 49
+++V+ASD D G NA + Y + + S + HF + SG I + LD E
Sbjct: 1002 IIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRE 1061
Query: 50 SRSSYEFPVVATDRG 64
+R Y+ V+ATD G
Sbjct: 1062 TRDRYQLTVLATDNG 1076
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L S F + V+GEI + LD E R Y+ V A D+
Sbjct: 1122 VTASDLDLGENAAIRYSLLPINSS---FQVHPVTGEISTREPLDRELRELYDLVVEARDQ 1178
Query: 64 G 64
G
Sbjct: 1179 G 1179
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G NA + Y+L E+ + + F + +G + +Q L ES VV
Sbjct: 2023 LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVV 2082
Query: 60 ATDRGKETQ 68
A D+G Q
Sbjct: 2083 ARDKGNPPQ 2091
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G + V Y+L + S F + + SG + ++Q LD+ES + V ATD G
Sbjct: 902 AHDKDSGSSGQVTYSLVKE-SGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGG 959
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D G NA + Y++ + N F + S SGE+ A+ LD E S Y + A+DR
Sbjct: 1816 VVASDLDEGPNADLIYSITGG-NLGNKFSIDSSSGELS-ARPLDREQHSRYTLQIQASDR 1873
Query: 64 GK 65
G+
Sbjct: 1874 GQ 1875
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N+ + Y+L E+P + F + +G I +D E+ + VV
Sbjct: 470 VLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVV 529
Query: 60 ATDRG 64
A D G
Sbjct: 530 ARDGG 534
>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
Length = 3556
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYT+GE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 630 ILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 689
Query: 61 TDRG 64
TDRG
Sbjct: 690 TDRG 693
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 305 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVV 364
Query: 60 ATDRGKE 66
A D G++
Sbjct: 365 AKDHGEQ 371
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+++A D D GVNA + Y+L F + S SG I LD E ++SY F V+A
Sbjct: 1971 VLQINAVDADLGVNARLVYSLANETQW--QFAIDSQSGLITTVGKLDRELQASYNFMVLA 2028
Query: 61 TDRGK 65
D G+
Sbjct: 2029 MDGGR 2033
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----------SPSRTNHFYMKSVSGEICIAQDLDFE 49
+++V+ASD D G NA + Y + + S + HF + SG I + LD E
Sbjct: 1055 IIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRE 1114
Query: 50 SRSSYEFPVVATDRG 64
+R Y+ V+ATD G
Sbjct: 1115 TRDRYQLMVLATDNG 1129
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L S F + V+GEI + LD E R Y+ V A D+
Sbjct: 1175 VTASDLDLGENAAIRYSLLPINSS---FQVHPVTGEISTREPLDRELRELYDLVVEARDQ 1231
Query: 64 G 64
G
Sbjct: 1232 G 1232
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYM---KSVSGEICIAQDLDFESRSSYEFP 57
+ R ASD D G +NY++G +PS + + M S +G + A D+E R Y+
Sbjct: 2881 VFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSETGLVTSAFVFDYEQRQRYDME 2940
Query: 58 VVATDRG 64
++A+D G
Sbjct: 2941 LLASDMG 2947
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 6 ASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G + V+Y+L G+S R F + + SG + ++Q LD+ES + V ATD G
Sbjct: 955 AHDKDSGSSGQVSYSLVGDSGKRL--FAIDARSGHLILSQHLDYESSQRHSLIVTATDGG 1012
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G NA + Y+L E+ + + F + +G + +Q L ES V+
Sbjct: 2076 LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVI 2135
Query: 60 ATDRGKETQ 68
A D+G Q
Sbjct: 2136 ARDKGTPPQ 2144
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D G NA + Y++ + N F + S SGE+ A+ LD E S Y + A+DR
Sbjct: 1869 VVASDLDEGPNADLIYSITGG-NLGNKFSIDSSSGELS-ARPLDREQHSRYTLQIQASDR 1926
Query: 64 GK 65
G+
Sbjct: 1927 GQ 1928
>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
Length = 3471
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYTLGE F ++S SGEICIA +LD+E RSSYEFPV+A
Sbjct: 590 ILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDYEQRSSYEFPVLA 649
Query: 61 TDRG 64
TDRG
Sbjct: 650 TDRG 653
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + S +G I I + LDFE++ +E VV
Sbjct: 265 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDSQTGAIFINKPLDFETKELHELVVV 324
Query: 60 ATDRGKE 66
A D G++
Sbjct: 325 AKDHGEQ 331
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ A+D D G+NA + Y L F + S SG I LD E +SSY F +A
Sbjct: 1929 VVRIKANDADLGINARLVYALANETQW--QFAIDSKSGLITTVGKLDRELQSSYSFMALA 1986
Query: 61 TDRGK 65
TD G+
Sbjct: 1987 TDGGR 1991
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D G NA + Y+L + + F ++ ++GEI + LD E R Y+ V A D+
Sbjct: 1143 VQASDLDLGDNAAIRYSLM---PQNSSFQIQPITGEITTKEPLDREQRELYDLLVEARDQ 1199
Query: 64 G 64
G
Sbjct: 1200 G 1200
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH------FYMKSVSGEICIAQDLDFESRSSY 54
+ R A+D D G +NY+L SPS + F++ SG + + D+E R Y
Sbjct: 2855 IFRAQATDLDRGPFGQLNYSLAASPSNADGDDEWRLFHIDPQSGVVTSSGVFDYEQRQRY 2914
Query: 55 EFPVVATDRGKET 67
+ + ATD G +T
Sbjct: 2915 DLELRATDMGGKT 2927
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+D D GVNA + Y++ + N F + + +GE+ A+ LD E S Y V A+DR
Sbjct: 1827 VVATDLDEGVNADILYSIIGG-NLGNKFSIDARTGELS-ARSLDREQHSRYTLQVQASDR 1884
Query: 64 GK 65
GK
Sbjct: 1885 GK 1886
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G N++V Y L E+P + F + S +G I +D E+ + V+
Sbjct: 483 VLQVVAHDRDEGNNSVVTYFLAETPETHAQWFQIDSQTGLITTRSHIDCETEPVPQLTVI 542
Query: 60 ATDRGK 65
A D G+
Sbjct: 543 ARDGGQ 548
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 4 VSASDPDCGVNAMVNYTLGE--SPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+SA+D D + + Y LG S +R N F + SG++ + + LD+ES+ Y+ ++
Sbjct: 2420 ISANDVDT--HPTLTYRLGSDSSVARENQGIFALDRYSGKLVLKRRLDYESQQEYQLEII 2477
Query: 60 ATDRGKETQ 68
A+D E +
Sbjct: 2478 ASDAAHEAR 2486
>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
Length = 3556
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYT+GE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 630 ILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 689
Query: 61 TDRG 64
TDRG
Sbjct: 690 TDRG 693
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+++A D D GVNA + Y+L F + S SG I LD E ++SY F V+A
Sbjct: 1971 VLQINAVDADLGVNARLVYSLANETQW--QFAIDSQSGLITTVGKLDRELQASYNFMVLA 2028
Query: 61 TDRGK 65
TD G+
Sbjct: 2029 TDGGR 2033
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 305 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVV 364
Query: 60 ATDRGKE 66
A D G++
Sbjct: 365 AKDHGEQ 371
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----------SPSRTNHFYMKSVSGEICIAQDLDFE 49
+++V+ASD D G NA + Y + + S + HF + SG I + LD E
Sbjct: 1055 IIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRE 1114
Query: 50 SRSSYEFPVVATDRG 64
+R Y+ V+ATD G
Sbjct: 1115 TRDRYQLTVLATDNG 1129
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L S F + V+GEI + LD E R Y+ V A D+
Sbjct: 1175 VTASDLDLGENAAIRYSLLPINSS---FQVHPVTGEISTREPLDRELRELYDLVVEARDQ 1231
Query: 64 G 64
G
Sbjct: 1232 G 1232
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYM---KSVSGEICIAQDLDFESRSSYEFP 57
+ R ASD D G +NY++G +PS + + M S +G + A D+E R Y+
Sbjct: 2881 VFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSETGLVTSAFVFDYEQRQRYDME 2940
Query: 58 VVATDRG 64
++A+D G
Sbjct: 2941 LLASDMG 2947
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G NA + Y+L E+ + + F + +G + +Q L ES V+
Sbjct: 2076 LLKVQALDADLGANAEIVYSLKAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVI 2135
Query: 60 ATDRGKETQ 68
A D+G Q
Sbjct: 2136 ARDKGTPPQ 2144
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G + V+Y+L S S F + + SG + + Q LD+ES + V ATD G
Sbjct: 955 AHDKDSGSSGQVSYSL-VSDSGKRLFAIDARSGHLSLTQHLDYESSQRHSLIVTATDGG 1012
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D G NA + Y++ + N F + S SGE+ A+ LD E S Y + A+DR
Sbjct: 1869 VVASDLDEGPNADLIYSITGG-NLGNKFSIDSSSGELS-ARPLDREQHSRYTLQIQASDR 1926
Query: 64 GK 65
G+
Sbjct: 1927 GQ 1928
>gi|195032868|ref|XP_001988576.1| GH10500 [Drosophila grimshawi]
gi|193904576|gb|EDW03443.1| GH10500 [Drosophila grimshawi]
Length = 3594
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYTLGE F ++S SGEICIA +LD+E R+SYEFPV+A
Sbjct: 618 ILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDYERRNSYEFPVLA 677
Query: 61 TDRG 64
TDRG
Sbjct: 678 TDRG 681
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR+ ASD D GVN+ + Y+L F + S SG I LD E +SSY F V+A
Sbjct: 1977 VLRIKASDADLGVNSRLVYSLANETQW--QFAIDSKSGLITTVGKLDRELQSSYSFMVLA 2034
Query: 61 TDRGK 65
TD G+
Sbjct: 2035 TDCGR 2039
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + + +G + I + LDFE++ +E VV
Sbjct: 293 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDARTGAVYINKPLDFETKELHELVVV 352
Query: 60 ATDRGKE 66
A D G++
Sbjct: 353 AKDHGEQ 359
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+D D G NA + Y+L + S F + V+GEI + LD E R Y+ V A D+
Sbjct: 1179 VSATDADLGENAAIRYSLLPANSS---FQVHPVTGEISTREPLDRELRELYDLVVEARDQ 1235
Query: 64 GKETQ 68
G T+
Sbjct: 1236 GTPTR 1240
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 16/80 (20%)
Query: 1 MLRVSASDPDCGVNAMVNYTL----------------GESPSRTNHFYMKSVSGEICIAQ 44
+++V+ASD D G NA + Y + G HF + SG I +
Sbjct: 1054 IIQVNASDLDTGNNARITYRIVDAGADNASQSSASVSGVDTDLAQHFGIFPNSGWIYLRA 1113
Query: 45 DLDFESRSSYEFPVVATDRG 64
LD ESR YE V+ATD G
Sbjct: 1114 ALDRESRDRYELTVLATDNG 1133
>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
Length = 3639
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYTLGE F ++S SGEICIA +LD+E R+SYEFPV+A
Sbjct: 652 ILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDYERRNSYEFPVLA 711
Query: 61 TDRG 64
TDRG
Sbjct: 712 TDRG 715
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + ASD D GVN+ + Y+L F + S SG I LD E +SSY F V+A
Sbjct: 2014 VLSIKASDADLGVNSRLVYSLANETQW--QFAIDSKSGLITTVGKLDRELQSSYSFMVLA 2071
Query: 61 TDRGK 65
TD G+
Sbjct: 2072 TDCGR 2076
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G NA + Y+L + S F + V+GEI + LD E R Y+ V A D+
Sbjct: 1215 VSASDADLGENAAIRYSLLPANSS---FQVHPVTGEISTREPLDREMRELYDLMVEARDQ 1271
Query: 64 GKETQ 68
G T+
Sbjct: 1272 GTPTR 1276
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + + +G + I + LDFE++ +E VV
Sbjct: 327 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDARTGAVYINKPLDFETKELHELVVV 386
Query: 60 ATDRGKE 66
A D G++
Sbjct: 387 AKDHGEQ 393
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 18/82 (21%)
Query: 1 MLRVSASDPDCGVNAMVNYTL------------------GESPSRTNHFYMKSVSGEICI 42
+++V+ASD D G NA + Y + G HF + SG I +
Sbjct: 1088 IIQVNASDLDTGNNARITYRIVDAGTDNASQSLASVGGGGSDADLAQHFGIFPNSGWIYL 1147
Query: 43 AQDLDFESRSSYEFPVVATDRG 64
LD ESR YE V+ATD G
Sbjct: 1148 RAALDRESRDRYELTVLATDNG 1169
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G NA ++Y L ++P + F + + +G I +D E+ + ++
Sbjct: 545 VLQVLARDRDEGTNAALSYALADTPDTHAQWFQIDAQTGLITTRSHIDCETEPVPQLTII 604
Query: 60 ATDRGK 65
A D G+
Sbjct: 605 ARDGGQ 610
>gi|195350165|ref|XP_002041612.1| GM16650 [Drosophila sechellia]
gi|194123385|gb|EDW45428.1| GM16650 [Drosophila sechellia]
Length = 2943
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 50/61 (81%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASDPDCGVNAMVNYT+GE F ++S SGEICIA +LDFE RSSYEFPV+ATDR
Sbjct: 49 VSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDR 108
Query: 64 G 64
G
Sbjct: 109 G 109
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA D D GVNA + Y+L F + S SG I LD E ++SY F V+A
Sbjct: 1370 VVQISAVDADLGVNARLVYSLANETQW--QFAIDSQSGLITTVGKLDRELQASYNFMVLA 1427
Query: 61 TDRGK 65
TD G+
Sbjct: 1428 TDGGR 1432
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----------SPSRTNHFYMKSVSGEICIAQDLDFE 49
+++V+ASD D G NA + Y + + S ++HF + SG I + LD E
Sbjct: 471 IIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSHHFGIFPNSGWIYLRAPLDRE 530
Query: 50 SRSSYEFPVVATDRG 64
+R Y+ ++ATD G
Sbjct: 531 ARDRYQLTILATDNG 545
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L S F + V+GEI + LD E R Y+ V A D+
Sbjct: 591 VTASDLDLGENAAIRYSLLPINSS---FQVHPVTGEISTREPLDRELRELYDLVVEARDQ 647
Query: 64 G 64
G
Sbjct: 648 G 648
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYM---KSVSGEICIAQDLDFESRSSYEFP 57
+ R ASD D G +NY++G PS + + M S SG + A D+E R Y+
Sbjct: 2268 VFRAHASDLDKGPFGQLNYSIGPVPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDME 2327
Query: 58 VVATDRG 64
++A+D G
Sbjct: 2328 LLASDMG 2334
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G NA + Y+L E+ + + F + +G + +Q L ES VV
Sbjct: 1475 LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVV 1534
Query: 60 ATDRGKETQ 68
A D+G Q
Sbjct: 1535 ARDKGTPPQ 1543
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G + V Y+L + S F + + SG + ++Q LD+ES + V ATD G
Sbjct: 371 AHDKDSGSSGQVTYSLVKD-SGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGG 428
>gi|157108477|ref|XP_001650243.1| cadherin [Aedes aegypti]
gi|108884003|gb|EAT48228.1| AAEL000700-PA [Aedes aegypti]
Length = 3131
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 52/61 (85%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPDCGVNAMVNYTLGE + F ++S +GE+CIA +LD+E+R+SYEFP++ATDR
Sbjct: 261 VSATDPDCGVNAMVNYTLGEGYKKITEFEIRSSTGEVCIAAELDYETRNSYEFPIIATDR 320
Query: 64 G 64
G
Sbjct: 321 G 321
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
++A+D D G+NA+V Y+L PS T+ F + +SGEI LD E++S Y+ V A D+
Sbjct: 808 ITATDADAGINAVVRYSL--IPSNTS-FQINPISGEITTRDRLDRETKSIYDLVVEARDQ 864
Query: 64 G 64
G
Sbjct: 865 G 865
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
++RV A D D GVNA + Y++ + H F + ++G I LD E ++ Y V
Sbjct: 909 VVRVRAIDRDYGVNASITYSILKGRDSDGHGMFTIDPITGLIRTKASLDHEEKTIYRLAV 968
Query: 59 VATDRGK 65
ATD GK
Sbjct: 969 AATDNGK 975
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D G+NA + Y+L F + S SG I A D E +S Y F VVA
Sbjct: 1583 VLTVKAVDADIGINARIVYSLANVTEWL--FDIDSKSGVITTAGHFDRERQSIYNFMVVA 1640
Query: 61 TDRGK 65
TD G+
Sbjct: 1641 TDGGR 1645
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 5 SASDPDCGVNAMVNYTLGES-PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+A D D G++ ++ Y L + P+ N F + S SG + +A+ LD+E+ + V A+D
Sbjct: 581 NAHDKDSGMSGVITYRLSNNGPATGNLFSIDSRSGHLSLARPLDYETVQRHTLIVTASDS 640
Query: 64 G 64
G
Sbjct: 641 G 641
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ ++A+D D N + Y+ G+SP ++F + SG++ + + LD+E+R ++ +
Sbjct: 2011 LTSITANDVDT--NPPLTYSFGDSPDEDAKSYFSIDRYSGKVILIKPLDYEARHEFQLRI 2068
Query: 59 VATD 62
+A+D
Sbjct: 2069 LASD 2072
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+ +A+D D G NA + Y + + + F+ + S++G + + LD+E + V
Sbjct: 1134 VFNFTATDNDSGTNAEIKYNISKPATAQKEFFSIDSLTGSLTLLAPLDYEETKEFLLIVQ 1193
Query: 60 ATDR 63
ATD+
Sbjct: 1194 ATDQ 1197
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L +SA+D D G N + Y+L ++P+ F + +G + Q L E+ V A
Sbjct: 1688 LLHISATDVDQGSNGEIVYSLNDNPNNA-KFRINPNTGALSATQSLASENGRLLHIEVTA 1746
Query: 61 TDRGKETQ 68
D+G Q
Sbjct: 1747 RDKGNPPQ 1754
>gi|170031843|ref|XP_001843793.1| cadherin [Culex quinquefasciatus]
gi|167871192|gb|EDS34575.1| cadherin [Culex quinquefasciatus]
Length = 2888
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 52/61 (85%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPDCGVNAMVNYTLGE + F ++S +GE+CIA +LD+E+R+SYEFP++ATDR
Sbjct: 43 VSATDPDCGVNAMVNYTLGEGYKKITEFEVRSSTGEVCIAAELDYETRNSYEFPIIATDR 102
Query: 64 G 64
G
Sbjct: 103 G 103
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+ASD D G+NA+V Y+L S S F + VSGEI LD E++S Y+ V A D
Sbjct: 587 QVTASDADTGINAVVRYSLIPSNSS---FQINPVSGEITTRDSLDRETKSDYDLVVEARD 643
Query: 63 RG 64
+G
Sbjct: 644 QG 645
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D G+NA + Y+L F + S SG I A + D E +S Y F VVA
Sbjct: 1363 VLTVKAVDADIGINARIVYSLANVTEWL--FDIDSKSGVITTAGNFDRERQSIYHFMVVA 1420
Query: 61 TDRGK 65
TD G+
Sbjct: 1421 TDGGR 1425
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++RV A D D G NA + Y++ G F + +SG + LD E ++ Y V
Sbjct: 689 VVRVRAIDRDNGANASITYSILKGRDSDGYGMFSIDPISGVLRTKVSLDHEEKTIYRLAV 748
Query: 59 VATDRGK 65
ATD GK
Sbjct: 749 AATDNGK 755
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 5 SASDPDCGVNAMVNYTLGES-PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+A D D G++ ++ Y L + PS ++ F + S SG + +A+ LD+E+ + V A+D
Sbjct: 363 NAHDKDSGMSGVITYRLSNNGPSTSSLFAVDSRSGHLSLARPLDYETTQRHMLIVTASDS 422
Query: 64 G 64
G
Sbjct: 423 G 423
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L +SA+D D G N + Y+L ++P+ + F + +G + Q L E+ V A
Sbjct: 1468 LLHISATDADQGSNGEIVYSLNDNPNNS-KFRINPSTGALSATQSLASENGRLLHIEVTA 1526
Query: 61 TDRGKETQ 68
D+G Q
Sbjct: 1527 RDKGNPPQ 1534
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+ +A+D D G NA + Y L + + + +F + S++G + + LD+E + V
Sbjct: 914 VFNFTATDSDSGTNAELKYNLSKPATPQKEYFSIDSLTGSLTLLAPLDYEETKEFLLIVQ 973
Query: 60 ATDR 63
ATD+
Sbjct: 974 ATDQ 977
>gi|158297323|ref|XP_317578.4| AGAP007905-PA [Anopheles gambiae str. PEST]
gi|157015140|gb|EAA12903.4| AGAP007905-PA [Anopheles gambiae str. PEST]
Length = 2864
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 51/61 (83%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPDCGVNAMVNYTLGE + F ++ +GE+CIA +LD+E+R+SYEFP++ATDR
Sbjct: 1 VSATDPDCGVNAMVNYTLGEGYKKNAEFEIRPSTGEVCIASELDYETRNSYEFPIIATDR 60
Query: 64 G 64
G
Sbjct: 61 G 61
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G+NA+V Y+L PS T+ F + VSGEI LD E+++SY+ V A D+
Sbjct: 552 VSASDSDAGINAVVRYSL--IPSNTS-FQINPVSGEITTRDSLDRETKASYDLVVEARDQ 608
Query: 64 G 64
G
Sbjct: 609 G 609
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+ +A D D G++ ++ Y L S +R++ F M S SG + +A+ LD+ES +
Sbjct: 317 LYEANAQDKDSGMSGVITYMLAGQGNTLSGARSSLFSMDSRSGHLTLARPLDYESMQRHT 376
Query: 56 FPVVATDRG 64
V A+D G
Sbjct: 377 LVVTASDSG 385
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V A D D G NA ++Y++ G F + +SG I LD E ++ Y V
Sbjct: 653 VVKVRAIDRDHGQNASISYSILKGRDSDGYGMFSIDPMSGVIRTKTSLDHEEKTIYRLAV 712
Query: 59 VATDRGK 65
ATD GK
Sbjct: 713 AATDNGK 719
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D G+NA + Y+L F + S +G I A D E ++ Y F VVA
Sbjct: 1334 VLTVKAIDADVGINARIVYSLANVTEWL--FDIDSKTGVITTAGLFDRERQNVYNFMVVA 1391
Query: 61 TDRGK 65
D G+
Sbjct: 1392 MDGGR 1396
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 1 MLRVSASDPDCGVNAMVNY-TLGESPSRTNH--------------FYMKSVSGEICIAQD 45
+L+VSA+D D G NA + Y LGE RT F + SG I +
Sbjct: 428 ILQVSATDADTGNNARLTYKILGEDHQRTGKSTQPASPDEPVAEIFGIFPNSGWIYLRTK 487
Query: 46 LDFESRSSYEFPVVATDRGKET 67
LD E + Y V+ +D G T
Sbjct: 488 LDREVKERYNITVIVSDNGVPT 509
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L +SA+D D G N + Y+L E+ S F + +G + Q L E+ V A
Sbjct: 1439 LLHISATDSDQGSNGEIVYSLNENASN-GKFRINPTTGALSATQSLASENGRLLHIEVTA 1497
Query: 61 TDRGKETQ 68
D+G Q
Sbjct: 1498 RDKGNPPQ 1505
>gi|270006362|gb|EFA02810.1| dachsous [Tribolium castaneum]
Length = 3474
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPDCGVNAMVNYTLGE + F ++S +GE+CI LD+E+R+ YEFPVVATDR
Sbjct: 625 VSATDPDCGVNAMVNYTLGEGFGKLKEFEVRSATGEVCITSSLDYETRNVYEFPVVATDR 684
Query: 64 G 64
G
Sbjct: 685 G 685
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D G N + Y++ S R N F + +G I + + LDFE++ +E +V
Sbjct: 244 VLQVFATDKDSGENGQIEYSINRRQSDRDNMFRIDPTTGLIVVNKPLDFETKELHELVIV 303
Query: 60 ATDRG 64
A D G
Sbjct: 304 AKDHG 308
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V ASD D VNA + Y+L F + + +G I A D E +S Y F VVA
Sbjct: 2012 IIKVHASDADMSVNARIIYSLANESQWL--FRIDNKTGVITTAGLFDRELQSVYNFLVVA 2069
Query: 61 TDRGK 65
TD GK
Sbjct: 2070 TDSGK 2074
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA + Y L + F + SG + + LD E++ YE V A
Sbjct: 1046 ILQVTAVDLDTGNNARLTYRLLPGNNTGEVFGIFPNSGWLYLKGSLDRETKDRYELTVTA 1105
Query: 61 TDRG 64
TD G
Sbjct: 1106 TDNG 1109
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
++RV A D D G NA + Y+L + + F + ++G I LD E ++ Y V
Sbjct: 1362 VVRVRAVDSDNGQNASITYSLLKRQDSDGYGVFKIDPLTGVIRTRMMLDHEEKTIYRLAV 1421
Query: 59 VATDRGK 65
VA+D GK
Sbjct: 1422 VASDAGK 1428
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+A+D D G N V Y L + F + +++G + ++ LD+E+ Y + ATD+
Sbjct: 1591 TATDVDSGSNGDVRYHLLHQYPTNDTFTIDTLTGTLILSNSLDYETVQEYTIIISATDQ 1649
>gi|328701666|ref|XP_003241675.1| PREDICTED: protein dachsous-like [Acyrthosiphon pisum]
Length = 3383
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVN+MVN+TL ES + F +KS +GEIC+A+ LD+E+R YEFPVVA
Sbjct: 569 VLKVSASDPDCGVNSMVNFTLSES---SGPFSIKSATGEICLAKQLDYETRRLYEFPVVA 625
Query: 61 TDRG 64
TDRG
Sbjct: 626 TDRG 629
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D G N +V Y++ S + +F + +G I + + LD+E+R +E VV
Sbjct: 246 ILQVHATDVDDGDNGVVEYSISRRQSDKEGYFTVDRQTGVISVNRPLDYETREVHELVVV 305
Query: 60 ATDRGKE 66
A DRG +
Sbjct: 306 AKDRGDQ 312
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L A D D GVNA + Y+L S N F + + +G I ++LD E + +Y VVA
Sbjct: 1844 VLTAKAHDADVGVNAKITYSL--SNQTENVFQIDNKTGIITTVENLDRERQPNYWLQVVA 1901
Query: 61 TDRGK 65
D GK
Sbjct: 1902 RDGGK 1906
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RVS D D G NA V Y+ E+ TN F + +G + + L ++ + V A
Sbjct: 1949 IVRVSTVDKDEGSNADVLYSFKENQEATNRFRINPNTGVVTASSSLAADNGQVFHLEVTA 2008
Query: 61 TDRGKETQ 68
TD+G Q
Sbjct: 2009 TDKGNPPQ 2016
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A+DPD G N V+Y L S ++F + G I + LD+E+ V+A D G
Sbjct: 891 ATDPDSGANGQVHYELIASTQEPSYFQVDHNRGTISLIHGLDYETVHRLTVTVIARDSG 949
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+D D G NA++ Y+L S S F + SGE+ + LD ESR +E V A D+
Sbjct: 1101 VSATDRDAGDNALIRYSLIPSNSS---FNINLYSGELSTKEPLDRESRVWHEVIVEARDQ 1157
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA DPD G + V Y++ + N F++ +GE+ A+ LD E +S Y+ + +R
Sbjct: 1744 VSAIDPDWGSHGQVVYSIIGG-NGGNKFHLDPKTGELT-AKTLDREVQSKYQLQIAGQNR 1801
Query: 64 GKET 67
G T
Sbjct: 1802 GSTT 1805
>gi|242024858|ref|XP_002432843.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212518352|gb|EEB20105.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 2799
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+D DCGVNA VNYTLGE + F++KS +GEICIA +LD+E SYEFPV+A+DR
Sbjct: 9 VTANDSDCGVNAKVNYTLGEESGKLKEFFIKSDTGEICIANELDYEKIKSYEFPVIASDR 68
Query: 64 G 64
G
Sbjct: 69 G 69
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++SA D D G N+++ Y+ PS + F + +G+I + LD E + YE A D
Sbjct: 554 KISAVDLDYGQNSLIKYSF--IPSNNSSFKINPTTGDIYAKESLDREKKEIYELVAEARD 611
Query: 63 RG 64
+G
Sbjct: 612 QG 613
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+ + A D D G N +V Y+L S + + F M S+ G + + + LD+E +
Sbjct: 328 LYQAHAIDKDSGENGVVRYSLLFGKKSSSSTSKDFFKMDSILGHLTLTKRLDYEMNQRHS 387
Query: 56 FPVVATDRGKET 67
+VATD G T
Sbjct: 388 LVIVATDSGIPT 399
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V+A+D D N + Y L + TN F + SG+I + + LD+E++ Y ++A
Sbjct: 1683 LTSVTANDVDT--NPTLTYFLTK---ETNEFSIDRFSGKIILGKKLDYENKKEYNLAIMA 1737
Query: 61 TDRGKETQ 68
+D Q
Sbjct: 1738 SDTAHTAQ 1745
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D G+N+ + Y+L F + + +G I + D E + YEF VVA
Sbjct: 1259 VLTVHAVDADTGINSKIFYSLANETHWL--FKIDNKTGVISTSGFFDREKINVYEFQVVA 1316
Query: 61 TDRGK 65
+D G+
Sbjct: 1317 SDGGR 1321
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V ASD D GVN + Y++ S + N F + SG + A+ LD E S Y + A D
Sbjct: 1156 KVVASDLDEGVNGEITYSI-TSGNIGNKFSIDIHSG-LLSARPLDREVHSKYVLGITAQD 1213
Query: 63 RGKET 67
RG T
Sbjct: 1214 RGNPT 1218
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 1 MLRVSASDPDCGVNAMVNY---------TLGESPSRTNHFYMKSVSGEICIAQDLDFESR 51
+L+V+A+D D G NA + Y T G T F + SG I + ++LD E+
Sbjct: 439 ILQVAATDQDTGNNARITYRIKKIIGNGTTGNVDDET--FGIFPNSGLIYLKENLDRETI 496
Query: 52 SSYEFPVVATDRG 64
+ Y+ + ATD G
Sbjct: 497 NKYDVLITATDNG 509
>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
Length = 3261
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+DPDCGVNA+VNYT+G+ + F + SGEICI+ LD E R+ YEFP++A
Sbjct: 553 VLKVSATDPDCGVNAIVNYTMGDGFGKYREFEVNPSSGEICISAALDHEKRNIYEFPILA 612
Query: 61 TDRG 64
TDRG
Sbjct: 613 TDRG 616
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D G N + Y++ S R + F + ++G I + + LDFE++ +E VV
Sbjct: 229 VLQVFATDTDAGDNGRITYSINRRQSDRDSVFVIDPLTGVISVNRPLDFETKEVHELVVV 288
Query: 60 ATDRG 64
A+D G
Sbjct: 289 ASDSG 293
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSS-YEFPVV 59
+L ++A+D D G NA V Y+L SP T+ FY+ +G I Q L F R + V
Sbjct: 2341 VLSINATDADKGENARVRYSLAISP--TDAFYISEETGVIYTNQTLTFNPRQPVLQLVVK 2398
Query: 60 ATDRGK 65
A DRG+
Sbjct: 2399 AQDRGR 2404
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
L+V+A D D G NA + Y + E + + F + SG + + + LD E R Y VVA
Sbjct: 967 FLQVNAIDLDTGNNARLTYRVKEE-ALADVFGIFPNSGSLYLKKSLDREMRDRYTLTVVA 1025
Query: 61 TDRG 64
TD G
Sbjct: 1026 TDNG 1029
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+D D G NA + Y+L F + + +G + D E R SY F V A
Sbjct: 1811 VMTVQATDADRGHNAKITYSLSNETQWL--FKIDNETGVLTTTGHFDRERRGSYTFEVRA 1868
Query: 61 TDRGK 65
TD G+
Sbjct: 1869 TDGGR 1873
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+ ++SA D D G N++V Y++ ESP + ++ F + +G I + +D E+ + ++
Sbjct: 446 VFQLSALDRDLGNNSVVTYSILESPDTHSDWFQIDGRTGLITTRKHIDCETDPVPQITIL 505
Query: 60 ATDRGK 65
A+D G+
Sbjct: 506 ASDAGR 511
>gi|391332942|ref|XP_003740885.1| PREDICTED: protein dachsous-like [Metaseiulus occidentalis]
Length = 3117
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+ASDPDCGVNA+VN+TLG P+ + F + + SGE+CIA LD E RS+YE PV+A
Sbjct: 576 VLKVAASDPDCGVNAVVNFTLG--PTSSPSFRIDARSGELCIAAKLDREERSTYEIPVLA 633
Query: 61 TDRG 64
TDRG
Sbjct: 634 TDRG 637
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D G N V Y++ S R +F + SGEI + + LDFE++ S+E VV
Sbjct: 253 VLRVLATDTDEGRNGEVRYSINRRQSDREQYFNIDPKSGEIFVNKPLDFETKESHELVVV 312
Query: 60 ATDRG 64
A D G
Sbjct: 313 ARDNG 317
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
LRV+A+D D G NA + Y L +SP+ ++ F + +G + + + LD E+ SY V A
Sbjct: 989 FLRVTAADSDSGNNARLTYRLVDSPAASSTFGIYPNTGYVYLRESLDRETEDSYTIQVEA 1048
Query: 61 TDRG 64
D G
Sbjct: 1049 VDNG 1052
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++A D D G+N +V Y++ E + S F + VSG I + + LD+E ++ Y F V A D
Sbjct: 1417 ITAHDEDSGLNGLVRYSIIEPNGSGKPTFTIDPVSGVITLIEPLDYEKQAQYIFVVEAQD 1476
Query: 63 RGKETQ 68
+ +E +
Sbjct: 1477 QAREIE 1482
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D DC ++ VNY + S + NHF + + G I + ++LDF+ ++F V A
Sbjct: 2564 VLSVVAEDRDC--DSEVNYDI-TSGNELNHFAIDKLDGSIFLLKELDFDRAGEFKFIVRA 2620
Query: 61 TD 62
TD
Sbjct: 2621 TD 2622
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A D D G N ++Y+L E + +F + SG I + + LD+E R + V+A D
Sbjct: 889 VHAQDADSGENGRISYSLAE---ESENFKVNERSGAIILKRSLDYELRQQHRLTVIAED 944
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A D D G NA + Y+L S + F + ++GE+ LD E RS+YE V A D+
Sbjct: 1098 IRAIDKDLGDNAAIRYSL---LSNIDEFSINPMTGEMHTKNRLDREKRSNYECIVEAQDQ 1154
Query: 64 GKETQ 68
G + +
Sbjct: 1155 GAKPK 1159
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEI-CIAQDLDFESRSSYEFPVVAT 61
R+ A+D D G N + Y++ E + N F + +SG + C A LD ES S Y V+A
Sbjct: 1734 RLHAADDDLGENGEIVYSIEEG-NVGNVFSIAPLSGNLSCKA--LDRESASEYSLVVLAQ 1790
Query: 62 DRG 64
DRG
Sbjct: 1791 DRG 1793
>gi|357623109|gb|EHJ74393.1| cadherin [Danaus plexippus]
Length = 2755
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA DPDCGVNA+VNYTLG+ +R F +K+ SGE+C++ LD+E+ S YEFPV+A+DR
Sbjct: 1 MSAIDPDCGVNAIVNYTLGDFLAR--QFSIKADSGELCVSAPLDYEANSDYEFPVIASDR 58
Query: 64 G 64
G
Sbjct: 59 G 59
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNY-TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A D D G NA + Y + E+ + HF ++ +G + +A+ LD ES + ++ ++
Sbjct: 413 ILEVQAIDKDTGNNARITYRVVSENNTNEEHFKVQPSTGWVYLAKALDRESIAKHKMTII 472
Query: 60 ATDRG 64
ATD G
Sbjct: 473 ATDNG 477
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSA+D D G+NA + Y L ++ S N F + +G + Q L E+ V+A
Sbjct: 1374 LLRVSATDNDIGINAEILYELLDTSS--NKFRINPTTGILTATQSLASENGKLIHLKVMA 1431
Query: 61 TDRGKETQ 68
D+G Q
Sbjct: 1432 KDKGSPPQ 1439
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+D D G N ++ Y++ S + N F + + +G++ A+ LD E+++ Y+ +VA D
Sbjct: 1167 VTATDKDIGANGVITYSI-SSGNNGNKFTIDATTGKLT-AKTLDRETQAKYDLTIVAYDH 1224
Query: 64 G 64
G
Sbjct: 1225 G 1225
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 5 SASDPDCGVNAMVN-YTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
SA D D G N +N Y + P N F + S++G + + LDFE Y V ATD
Sbjct: 843 SAKDADSGSNGELNFYIISSQPVSNNVFNLDSLTGTLTLNSHLDFEILKEYWLVVEATD 901
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N + Y+L F + + SG I D E S Y F VA
Sbjct: 1269 IIKVRATDADLGFNKRIVYSLANESQ--GLFRIDNKSGVIYTTGYFDREKTSIYHFEAVA 1326
Query: 61 TDRGK 65
TD+G+
Sbjct: 1327 TDQGR 1331
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++SA+D D G NA++ Y+L PS T+ F + +G I + LD E +++Y A D
Sbjct: 522 KISATDADIGDNAVIKYSL--FPSNTS-FVVNPSTGVITAKEVLDREYKNTYLLFAEARD 578
Query: 63 RG 64
+G
Sbjct: 579 QG 580
>gi|345485230|ref|XP_003425221.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like [Nasonia
vitripennis]
Length = 3357
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++V ASDPDCGVNAMVNYTL S F ++S +G+IC+ LD E+ + +E PV+A
Sbjct: 564 FIKVQASDPDCGVNAMVNYTLAPSSGAAEQFVVRSDTGDICVRAPLDRETAAYHELPVIA 623
Query: 61 TDRG 64
TDRG
Sbjct: 624 TDRG 627
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D GVN + Y++ E S F + +++G I A LD E +S Y F VVA
Sbjct: 1868 IMQVRATDSDQGVNGKITYSIAEESSWL--FRVDNLTGVITTAGSLDREQQSLYRFLVVA 1925
Query: 61 TDRGK 65
TD GK
Sbjct: 1926 TDSGK 1930
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D G N + Y++ S R F + +G + + + LDFES+ +E +V
Sbjct: 244 VLKVDASDADAGENGRIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKERHELVIV 303
Query: 60 ATDRGKE 66
A DRG +
Sbjct: 304 ARDRGAQ 310
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G NA++ Y + ++ S F + +GEI + LD ES++ +E + A D+
Sbjct: 1111 VSASDTDLGKNALLRYAVVQANS---SFAVDPDTGEITTREPLDRESKAVHELVLEARDQ 1167
Query: 64 GKETQ 68
G ++
Sbjct: 1168 GTPSR 1172
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G N + Y L T F + S++G + +A+ LD E RS Y + A DR
Sbjct: 1429 LSATDLDDGPNGELRYGLVAEYPPTGSFAVDSLTGALTLAKPLDREERSEYTLVLKAEDR 1488
Query: 64 GKETQ 68
+
Sbjct: 1489 APAAE 1493
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV A D D G NA V YT+ + N F + +SG I LD E R+ Y V A
Sbjct: 1214 RVRALDNDLGENASVTYTILKDRDSDGYNVFAIDPISGMIKTKVALDHEDRNVYRLSVKA 1273
Query: 61 TDRGK 65
+D G+
Sbjct: 1274 SDAGR 1278
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RVSA D D G NA V Y+L S F + +G I A +D E+ + V+A
Sbjct: 462 VIRVSAEDADEGPNARVRYSLLNS----TWFAIDEDTGLISTAAHVDCEADPAPLLTVLA 517
Query: 61 TDRGK 65
TD GK
Sbjct: 518 TDSGK 522
>gi|195369899|ref|XP_002045856.1| GM16085 [Drosophila sechellia]
gi|194121585|gb|EDW43628.1| GM16085 [Drosophila sechellia]
Length = 214
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 16 MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
MVNYT+GE F ++S SGEICIA +LDFE RSSYEFPV+ATDRG
Sbjct: 1 MVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRG 49
>gi|350403194|ref|XP_003486727.1| PREDICTED: protein dachsous-like [Bombus impatiens]
Length = 3229
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
L+V A+DPDCGVNAMVNYTL + ++S +G+IC+ LD E+ E PV+A
Sbjct: 465 FLKVQATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDICVRTPLDRETAPYLEIPVIA 524
Query: 61 TDRG 64
TDRG
Sbjct: 525 TDRG 528
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+DPD GVN + Y +GE S F + +++G I A LD E ++SY F VVA
Sbjct: 1751 VMSVRATDPDQGVNGKITYAIGEETSWL--FRVDNLTGVITTAGPLDRERQTSYNFVVVA 1808
Query: 61 TDRGK 65
TD GK
Sbjct: 1809 TDSGK 1813
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G N + Y++ S R F + +G + + + LDFES+ +E +V
Sbjct: 145 VLAVNATDSDAGDNGRIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKERHELVIV 204
Query: 60 ATDRGKE 66
A DRG +
Sbjct: 205 ARDRGAQ 211
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G NA++ Y + ++ S F + +GEI + LD E++ +E + A D+
Sbjct: 983 VSASDSDLGKNALLRYAVVQANS---SFTVDPDTGEITTKEPLDRETKGVHELVLEARDQ 1039
Query: 64 GKETQ 68
G ++
Sbjct: 1040 GTPSR 1044
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA ++Y L S + F + +G I +AQ LD E+ + V+A
Sbjct: 878 ILQVTAVDLDTGNNARLSYRLQGSTA----FRISPNTGWIYLAQILDRETLDRHALTVLA 933
Query: 61 TDRG 64
TD G
Sbjct: 934 TDNG 937
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV A D D G NA V YT+ + N F + ++G I LD E R+ Y V A
Sbjct: 1086 RVRALDTDLGENASVTYTILKDRDSDGYNVFTIDPITGMIRTKAVLDHEERNVYRVSVKA 1145
Query: 61 TDRGK 65
TD G+
Sbjct: 1146 TDAGR 1150
>gi|340728239|ref|XP_003402435.1| PREDICTED: protein dachsous-like [Bombus terrestris]
Length = 3327
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
L+V A+DPDCGVNAMVNYTL + ++S +G+IC+ LD E+ E PV+A
Sbjct: 563 FLKVQATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDICVRTPLDRETAPYLEIPVIA 622
Query: 61 TDRG 64
TDRG
Sbjct: 623 TDRG 626
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+DPD GVN + Y +GE S F + +++G I A LD E +SSY F VVA
Sbjct: 1849 VMSVRATDPDQGVNGKITYAIGEETSWL--FRVDNLTGVITTAGPLDRERQSSYNFVVVA 1906
Query: 61 TDRGK 65
TD GK
Sbjct: 1907 TDSGK 1911
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G N + Y++ S R F + +G + + + LDFES+ +E +V
Sbjct: 243 VLAVNATDSDAGDNGRIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKERHELVIV 302
Query: 60 ATDRGKE 66
A DRG +
Sbjct: 303 ARDRGAQ 309
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASDPD G NA++ Y + ++ S F + +GEI + LD E++ +E + A D+
Sbjct: 1081 VSASDPDLGKNALLRYAVVQANS---SFTVDPDTGEITTKEPLDRETKGVHELVLEARDQ 1137
Query: 64 GKETQ 68
G ++
Sbjct: 1138 GTPSR 1142
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++A D D G+N + Y+L E PSR F + S++G + +A+ LD E R+ Y + A+D
Sbjct: 1399 LTAIDLDSGLNGDLRYSLVAEFPSR-GSFAVDSLTGALTLARPLDREERAEYMLILKASD 1457
Query: 63 RG 64
R
Sbjct: 1458 RA 1459
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA ++Y L S + F + +G I +AQ LD E+ + V+A
Sbjct: 976 ILQVTAVDLDTGNNARLSYRLQGSTA----FRISPNTGWIYLAQILDRETLDRHALTVLA 1031
Query: 61 TDRG 64
TD G
Sbjct: 1032 TDNG 1035
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV A D D G NA V YT+ + N F + ++G I LD E R+ Y V A
Sbjct: 1184 RVRALDTDLGENASVTYTILKDRDSDGYNVFTIDPITGMIRTKAVLDHEERNVYRVSVKA 1243
Query: 61 TDRGK 65
TD G+
Sbjct: 1244 TDAGR 1248
>gi|195118208|ref|XP_002003632.1| GI18019 [Drosophila mojavensis]
gi|193914207|gb|EDW13074.1| GI18019 [Drosophila mojavensis]
Length = 2980
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 16 MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
MVNYT+GE F ++S SGEICIA +LD+E R+SYEFPV+ATDRG
Sbjct: 1 MVNYTIGEGFKHLTEFEVRSASGEICIAGELDYERRNSYEFPVLATDRG 49
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR++A D D GVN+ + Y+L F + SG I LD E ++SY F V+A
Sbjct: 1354 VLRINARDADLGVNSKLVYSLANETQW--QFAIDGTSGLITTVGKLDRELQASYSFMVLA 1411
Query: 61 TDRGK 65
TD G+
Sbjct: 1412 TDCGR 1416
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G NA + Y+L + S F + V+GEI + LD E R Y+ V A D+
Sbjct: 549 VSASDADLGENAAIRYSLLPANSS---FQVHPVTGEISTREPLDRELRELYDLMVEARDQ 605
Query: 64 GKETQ 68
G T+
Sbjct: 606 GTPTR 610
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 16/80 (20%)
Query: 1 MLRVSASDPDCGVNAMVNYTL----------------GESPSRTNHFYMKSVSGEICIAQ 44
+++V+ASD D G NA + Y + G HF + SG I +
Sbjct: 424 IIQVNASDLDTGNNARITYRIVDAGADNASQSLANAGGPDADLAQHFGIFPNSGWIYLRA 483
Query: 45 DLDFESRSSYEFPVVATDRG 64
LD ESR YE V+ATD G
Sbjct: 484 ALDRESRDRYELTVLATDNG 503
>gi|380011903|ref|XP_003690033.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like, partial
[Apis florea]
Length = 2820
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+DPDCGVNAMVNYTL + ++S +G+IC+ LD E+ E PV+ATDR
Sbjct: 1 VRATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDICVRTPLDRETAPYLEIPVIATDR 60
Query: 64 G 64
G
Sbjct: 61 G 61
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+DPD GVN + Y + E S F + +++G + A LD E +S+Y F VVA
Sbjct: 1344 VMTVRATDPDQGVNGKITYAIAEETSWL--FRVDNLTGVVTTAGALDRERQSAYNFVVVA 1401
Query: 61 TDRGK 65
TD GK
Sbjct: 1402 TDGGK 1406
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASDPD G NA++ Y + ++ S F + +GEI + LD E++ +E + A D+
Sbjct: 578 VSASDPDLGKNALLRYAVVQANS---SFTVDPDTGEIITREPLDRETKGVHELVLEARDQ 634
Query: 64 GKETQ 68
G ++
Sbjct: 635 GTPSR 639
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA ++Y L S + F + +G I +AQ LD ES + V+A
Sbjct: 473 ILQVTAVDLDTGNNARLSYRLQGSTA----FRISPNTGWIYLAQALDRESLDRHALTVLA 528
Query: 61 TDRG 64
TD G
Sbjct: 529 TDNG 532
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV A D D G NA V YT+ + N F + ++G I LD E R+ Y V A
Sbjct: 681 RVRALDTDLGENASVTYTILKDRDSDGYNVFTVDPITGMIRTKAVLDHEERNVYRVSVKA 740
Query: 61 TDRGK 65
TD G+
Sbjct: 741 TDAGR 745
>gi|443704241|gb|ELU01386.1| hypothetical protein CAPTEDRAFT_181060 [Capitella teleta]
Length = 2711
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-----ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+ +VSASDPDCG NA V Y + + PS F +++ +G+ICI +++D+E + +Y+
Sbjct: 2 IFQVSASDPDCGANAQVRYAVAANLGFQYPSE---FEVQAETGQICIIREVDYEKKHTYD 58
Query: 56 FPVVATDR 63
FP+VA D+
Sbjct: 59 FPIVARDQ 66
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A D D GVNA ++Y++ + F + +++G + A + D E + Y F V A
Sbjct: 1262 VLRVQAVDADVGVNAEISYSINNAAQ--GQFSINNITGVLSTAGEFDREKIAHYSFEVYA 1319
Query: 61 TDRG 64
TD G
Sbjct: 1320 TDGG 1323
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++A D D G NA + Y E TNH F + + +G I + LD ES+ Y F +
Sbjct: 627 QITARDSDKGENASITYGFYEGGPDTNHDTAMFNLDTSNGRITTKEVLDHESKVQYVFKL 686
Query: 59 VATDRG 64
+A D G
Sbjct: 687 LARDGG 692
>gi|291231670|ref|XP_002735781.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
Length = 2902
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D G NA++ Y++ + S HF + V+GEI DLDFE+RS Y F V A
Sbjct: 2034 VLTVKATDIDSGANAIIEYSITKGMSH-EHFSIDRVTGEIMTTADLDFETRSIYSFKVKA 2092
Query: 61 TDRG 64
+D G
Sbjct: 2093 SDGG 2096
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A+D D G N+ +NYT+ P +HF + V+G I + D+D E+ SY + V ATD
Sbjct: 2353 NVLATDRDVGSNSRINYTIASGPH--DHFILDIVTGSISTSADIDRENIESYSYNVKATD 2410
Query: 63 RG 64
G
Sbjct: 2411 NG 2412
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES-PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D G NA + Y+ S P +F + +GEI + Q +D+E+ + EF V+
Sbjct: 2455 VLTVDATDADNGTNAELTYSFHSSFPVGDEYFSIDGSTGEITLKQAVDYEAVHTLEFVVI 2514
Query: 60 ATDRG 64
+D G
Sbjct: 2515 CSDNG 2519
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L S +D D G + + Y + + PS + F + SG+I +A+ LD+E SSY+ V
Sbjct: 1081 LLASSVTDTDTGGHGISLYIITSVDPPSGKDAFQIDGRSGKIYLAKLLDYEDESSYDIAV 1140
Query: 59 VATDRGKET 67
D G T
Sbjct: 1141 EVEDGGGLT 1149
>gi|395504730|ref|XP_003756700.1| PREDICTED: uncharacterized protein LOC100917728 [Sarcophilus
harrisii]
Length = 1664
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
M+ ++A+DPD G+N ++Y + SP S + F M SV+G+I I +LDFE + YE V
Sbjct: 1074 MINLNATDPDEGINGEISYAIKRISPASEKSMFIMNSVTGDIRIHGELDFEDNNVYEIQV 1133
Query: 59 VATDRG 64
ATDRG
Sbjct: 1134 TATDRG 1139
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V+A+D D G+N ++ Y+L P + F + +GEI I +LDFE YE V
Sbjct: 261 IVKVNATDRDEGINKVLQYSLRSIKPKGNDLFRLNENTGEIRINGNLDFEENKFYELQVE 320
Query: 60 ATDRG 64
A D+G
Sbjct: 321 ANDKG 325
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSASDPD NA+V+Y+L E +N+ + S SG++ Q LD+E +F
Sbjct: 1287 IFTVSASDPDALENALVSYSLVERRVGERLLSNYVSVHSESGKVYALQPLDYEELELLQF 1346
Query: 57 PVVATDRG 64
V A D G
Sbjct: 1347 QVSARDAG 1354
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+ VSASDPD NA+V+Y+L GE P ++ + S SG++ Q LD E +
Sbjct: 473 IFTVSASDPDAQENALVSYSLVERRVGERP-LSSFVSVHSESGKVYALQPLDHEELELLQ 531
Query: 56 FPVVATDRG 64
F V A D G
Sbjct: 532 FQVSARDSG 540
>gi|242000160|ref|XP_002434723.1| cadherin, putative [Ixodes scapularis]
gi|215498053|gb|EEC07547.1| cadherin, putative [Ixodes scapularis]
Length = 1123
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA DPD GVN + Y L E P+R F + G I + + LDF+ S+YE VVA
Sbjct: 180 VLKLSAYDPDLGVNGEIYYRLLE-PTR--QFAIHPTMGTITLTRPLDFQKNSTYELTVVA 236
Query: 61 TDRGKETQ 68
DRG E +
Sbjct: 237 EDRGTELE 244
>gi|326673311|ref|XP_003199833.1| PREDICTED: protocadherin alpha-7-like [Danio rerio]
Length = 797
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ RV+A+D D G+N V YTLG++ R H F + S++GEI I + +DFE + V
Sbjct: 263 IARVNATDSDEGLNGEVIYTLGKTSRRKVHEIFSLDSITGEINIKEPIDFEENEVHRLTV 322
Query: 59 VATDRGK 65
ATD+G+
Sbjct: 323 QATDKGQ 329
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D NA ++Y + G ++ + SG I + DFE+ ++F
Sbjct: 477 VFSVSASDKDLNENAAISYQIVRGNGTESDMSSFLSINHESGVINALKSFDFEAIKKFQF 536
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 537 HILATDSG 544
>gi|426231047|ref|XP_004023517.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A3 [Ovis aries]
Length = 928
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + FY+ SV+G++ I ++LD+E + YE +
Sbjct: 359 LLTVNATDPDEGFNAQVSYVLDKMPGKIAQIFYLNSVTGDLSIVKNLDYEDATFYEIIIE 418
Query: 60 ATD 62
A D
Sbjct: 419 AQD 421
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
+A DPD G N+++NY L SPS +KS + E+ + Q LD E + ++ ++
Sbjct: 254 TAFDPDVGTNSLLNYQL--SPSDYFSLAVKSATDGAKYPELVLQQALDREEKKVHQLALI 311
Query: 60 ATDRG 64
A+D G
Sbjct: 312 ASDGG 316
>gi|113951653|ref|NP_001039292.1| protocadherin-1 precursor [Gallus gallus]
gi|50346359|gb|AAT74929.1| protocadherin [Gallus gallus]
Length = 1049
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSASD D G NA + Y+L PS + F + SGEI + LD E R YEF VVA
Sbjct: 517 VMEVSASDADSGSNAKLVYSLVTDPSSKDSFTIDPDSGEIRVKAVLDREQRERYEFLVVA 576
Query: 61 TDRG 64
D+G
Sbjct: 577 ADKG 580
>gi|73949397|ref|XP_849328.1| PREDICTED: protocadherin gamma-A3 [Canis lupus familiaris]
Length = 871
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + FY+ SV+G+I I + LD+E YE V
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKVAQIFYLNSVTGDISILRSLDYEDAMFYEIKVE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|326928251|ref|XP_003210294.1| PREDICTED: protocadherin-1-like [Meleagris gallopavo]
Length = 1198
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSASD D G NA + Y+L PS + F + SGEI + LD E R YEF VVA
Sbjct: 490 VMEVSASDADSGSNAKLVYSLVTDPSSKDSFTIDPDSGEIRVKAVLDREQRERYEFLVVA 549
Query: 61 TDRG 64
D+G
Sbjct: 550 ADKG 553
>gi|345328658|ref|XP_001507931.2| PREDICTED: protocadherin gamma-B6-like [Ornithorhynchus anatinus]
Length = 844
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+DPD GVNA ++YT G + + N F + +SGEI + LDFE + Y+ V
Sbjct: 261 VLRVKATDPDQGVNAQISYTFSGLTQAVRNSFTVDPISGEIITKKRLDFEETNRYKMDVE 320
Query: 60 ATDRGKET 67
A D G T
Sbjct: 321 AKDGGGLT 328
>gi|328703039|ref|XP_003242076.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
isoform 1 [Acyrthosiphon pisum]
gi|328703043|ref|XP_003242078.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
isoform 3 [Acyrthosiphon pisum]
Length = 4140
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G+N + Y+ E +TN F M +G I I + L FE R SY+F V A
Sbjct: 183 VLKVSAEDADIGMNGEIYYSFKE---KTNQFAMHPRTGVITITRSLRFEDRRSYDFVVEA 239
Query: 61 TDRG 64
DRG
Sbjct: 240 RDRG 243
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++ A+D D G+N + ++L +S NHF + S SG + +A+ LD E+ +Y V A
Sbjct: 3201 VIKMHATDADIGLNRKLKFSLQDSAD--NHFIISSDSGIVTLAKKLDRETCETYNISVKA 3258
Query: 61 TDRG 64
D+G
Sbjct: 3259 IDQG 3262
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+D D +N ++ Y++ + + T++F++ G I + Q LD E+R + +
Sbjct: 2372 ILRVTATDNDTDINRVIKYSIKKDEENSTDYFHIDEKEGSIYLKQSLDHETRPFHHVVLE 2431
Query: 60 ATDRG 64
ATD G
Sbjct: 2432 ATDTG 2436
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D +N + Y L + F + S +G I +A+ LD E S+Y + A
Sbjct: 3410 VIKVSATDLDSELNGKIRYALVKG-DHHQQFAIDSFTGNITVAKPLDREQVSTYNLQIRA 3468
Query: 61 TDRG 64
TD G
Sbjct: 3469 TDSG 3472
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +++A DPD G N + Y L + T HF + SG + ++ LD E + YE V
Sbjct: 866 IFKINAQDPDQGENGRIVYILT---TDTTHFSVDKTSGNLYVSGRLDRERQELYELKVTV 922
Query: 61 TDRGKE 66
+D E
Sbjct: 923 SDCAPE 928
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV A D D G V+Y++ S + F + +++GEI LD E S YE V+A
Sbjct: 2581 IIRVQAIDNDTGPYGEVSYSI-PSKKMSKIFNINNITGEIISRMPLDREEVSLYELNVLA 2639
Query: 61 TDRG 64
D+G
Sbjct: 2640 CDQG 2643
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+ D G NA V Y++ + N F + S +G I + + LD+E Y + ATD
Sbjct: 3307 RVLATSLDSGKNAEVVYSIAGG-NEHNKFSINSETGVISVFEMLDYERVRDYLLTIQATD 3365
Query: 63 RGK 65
G+
Sbjct: 3366 LGE 3368
>gi|449267282|gb|EMC78248.1| Protocadherin-1, partial [Columba livia]
Length = 984
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 37/64 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSASD D G NA + Y+L PS F + SGEI + LD E R YEF VVA
Sbjct: 452 VMEVSASDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVA 511
Query: 61 TDRG 64
D+G
Sbjct: 512 ADKG 515
>gi|326673347|ref|XP_001921875.3| PREDICTED: protocadherin gamma-C4-like [Danio rerio]
Length = 802
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+++A+D D G N +V YT G + RT N F + S +GEI I +LDFE Y+ V
Sbjct: 260 LLKLNATDLDEGSNGVVEYTFGRNLKRTVQNLFILHSSTGEIQIKGELDFEETDVYKLDV 319
Query: 59 VATDRGK 65
A+D+G+
Sbjct: 320 QASDKGQ 326
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN----HFYMKSVSGEICIAQDLDFESRSSYEF 56
+L V+ASD D NAM+ Y++ +S S N + + S +G I DFE + F
Sbjct: 474 ILSVTASDKDLDKNAMIIYSIIKSDSAQNDMASYLNINSETGVIYALNRFDFEVVKKFHF 533
Query: 57 PVVATDRG 64
V+ATD G
Sbjct: 534 HVLATDSG 541
>gi|328703041|ref|XP_003242077.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
isoform 2 [Acyrthosiphon pisum]
Length = 4147
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G+N + Y+ E +TN F M +G I I + L FE R SY+F V A
Sbjct: 183 VLKVSAEDADIGMNGEIYYSFKE---KTNQFAMHPRTGVITITRSLRFEDRRSYDFVVEA 239
Query: 61 TDRG 64
DRG
Sbjct: 240 RDRG 243
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++ A+D D G+N + ++L +S NHF + S SG + +A+ LD E+ +Y V A
Sbjct: 3208 VIKMHATDADIGLNRKLKFSLQDSAD--NHFIISSDSGIVTLAKKLDRETCETYNISVKA 3265
Query: 61 TDRG 64
D+G
Sbjct: 3266 IDQG 3269
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+D D +N ++ Y++ + + T++F++ G I + Q LD E+R + +
Sbjct: 2379 ILRVTATDNDTDINRVIKYSIKKDEENSTDYFHIDEKEGSIYLKQSLDHETRPFHHVVLE 2438
Query: 60 ATDRG 64
ATD G
Sbjct: 2439 ATDTG 2443
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D +N + Y L + F + S +G I +A+ LD E S+Y + A
Sbjct: 3417 VIKVSATDLDSELNGKIRYALVKG-DHHQQFAIDSFTGNITVAKPLDREQVSTYNLQIRA 3475
Query: 61 TDRG 64
TD G
Sbjct: 3476 TDSG 3479
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +++A DPD G N + Y L + T HF + SG + ++ LD E + YE V
Sbjct: 866 IFKINAQDPDQGENGRIVYILT---TDTTHFSVDKTSGNLYVSGRLDRERQELYELKVTV 922
Query: 61 TDRGKE 66
+D E
Sbjct: 923 SDCAPE 928
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV A D D G V+Y++ S + F + +++GEI LD E S YE V+A
Sbjct: 2588 IIRVQAIDNDTGPYGEVSYSI-PSKKMSKIFNINNITGEIISRMPLDREEVSLYELNVLA 2646
Query: 61 TDRG 64
D+G
Sbjct: 2647 CDQG 2650
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+ D G NA V Y++ + N F + S +G I + + LD+E Y + ATD
Sbjct: 3314 RVLATSLDSGKNAEVVYSIAGG-NEHNKFSINSETGVISVFEMLDYERVRDYLLTIQATD 3372
Query: 63 RGK 65
G+
Sbjct: 3373 LGE 3375
>gi|410913715|ref|XP_003970334.1| PREDICTED: uncharacterized protein LOC101073688 [Takifugu rubripes]
Length = 3967
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V A DPD G N V YTLGE+P+R + F + VSG I + LDFE S Y+ + A+
Sbjct: 3444 VKAIDPDEGSNGEVEYTLGEAPTRKIYDIFEIDGVSGRIILKGVLDFEETSIYKLDIEAS 3503
Query: 62 DRG 64
D+G
Sbjct: 3504 DKG 3506
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++RV+A+D D G+N V+Y+ G S+ + + + +GEI + LD+E SYE +
Sbjct: 1818 IIRVNATDMDDGLNGDVSYSFGNVNSKVRELFDVNAATGEIIVKGKLDYEVDDSYEIDIQ 1877
Query: 60 ATDRG 64
A+D G
Sbjct: 1878 ASDSG 1882
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ R+ ASDPD G N + YTLG++ R + F + +++G I + +D+E Y+ V
Sbjct: 1041 VFRLLASDPDEGSNGEIEYTLGKTLRRKIYDIFELDTITGIITVKGTVDYEENEIYKLDV 1100
Query: 59 VATDRG 64
A+D+G
Sbjct: 1101 EASDKG 1106
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+VSA DPD G N + Y+L E+ + N F + S++G+I + LD+E +Y+ + A
Sbjct: 2639 KVSAIDPDEGANGEIEYSLSEAIHQKIYNLFELDSLTGQIKLKGMLDYEESETYKLDIEA 2698
Query: 61 TDRG 64
+D+G
Sbjct: 2699 SDKG 2702
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ VSA+D D NA+++Y++ T+ + S +G+I + DFE+ +++F VVA
Sbjct: 2851 IFSVSATDNDVSENAVISYSIARLNDVTSFLNVNSENGQISALKSFDFETLKTFQFQVVA 2910
Query: 61 TDRG 64
D G
Sbjct: 2911 LDSG 2914
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+VSA DPD G N + Y+L ++ R + F + ++G+I + L++E +Y + A
Sbjct: 263 KVSAIDPDEGANGEIEYSLSKTLVRNVYDIFELDRLNGKIRLKGLLNYEESETYRLDIEA 322
Query: 61 TDRG 64
TD+G
Sbjct: 323 TDKG 326
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ VSA+D D NA+++Y++ T+ + S +G+I + DFE+ +++F VVA
Sbjct: 475 IFSVSATDNDVSENAVISYSIARLNDVTSFLNVNSENGQISALKSFDFETLKTFQFQVVA 534
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ VSA+D D NA+++Y++ T+ + S +G+I + DFE+ +++F VVA
Sbjct: 1255 IFSVSATDNDVSENAVISYSIARLNDVTSFLNVNSENGQISALKSFDFETLKTFQFQVVA 1314
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGE------ICIAQDLDFESRSSYEFPV 58
+A DPD GVNA+ YTL S +HF +++ GE + + + LD E + V
Sbjct: 3337 AARDPDSGVNAIRTYTL----SSNDHFDLETSQGEEDKTPFLVLKKSLDREKSKQHSLLV 3392
Query: 59 VATDRGK 65
A D GK
Sbjct: 3393 TAVDGGK 3399
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ V+A D D G NA+++Y + S T + +G+I + DFE+ +++F
Sbjct: 2031 LFSVNAQDGDEGDNAVISYQIARDSSTDIKATTFLNINQDNGDILALKSFDFETLKTFQF 2090
Query: 57 PVVA 60
VVA
Sbjct: 2091 QVVA 2094
>gi|297295310|ref|XP_001088004.2| PREDICTED: cadherin-23-like [Macaca mulatta]
Length = 1649
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I ++LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGELSILKNLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+DPD G N V Y+ + + + F + S+SG+I I DLD+E Y+ V
Sbjct: 1090 LLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGDLDYEDSGFYDIDVE 1149
Query: 60 ATD 62
A D
Sbjct: 1150 AHD 1152
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + Q LD E + ++ +V
Sbjct: 156 TAFDPDVGMNSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLEQALDREKKEIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L ++A DPD G NA++ Y+L E + +++ + S +G + + D+E +
Sbjct: 1300 ILSMTAQDPDSGDNALITYSLAEDTFQDAPLSSYVSINSNTGILYALRSFDYEQLRDLQL 1359
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 1360 LVTASDSG 1367
>gi|119514194|gb|ABL75857.1| protocadherin 2A17 [Takifugu rubripes]
Length = 936
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V A DPD G N V YTLGE+P+R + F + VSG I + LDFE S Y+ + A+
Sbjct: 264 VKAIDPDEGSNGEVEYTLGEAPTRKIYDIFEIDGVSGRIILKGVLDFEETSIYKLDIEAS 323
Query: 62 DRG 64
D+G
Sbjct: 324 DKG 326
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGE------ICIAQDLDFESRSSYEFPV 58
+A DPD GVNA+ YTL S +HF +++ GE + + + LD E + V
Sbjct: 157 AARDPDSGVNAIRTYTL----SSNDHFDLETSQGEEDKTPFLVLKKSLDREKSKQHSLLV 212
Query: 59 VATDRGK 65
A D GK
Sbjct: 213 TAVDGGK 219
>gi|410913709|ref|XP_003970331.1| PREDICTED: protocadherin alpha-8-like [Takifugu rubripes]
Length = 786
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V A DPD G N V YTLGE+P+R + F + VSG I + LDFE Y+ V A+
Sbjct: 264 VKAIDPDEGANGEVEYTLGEAPTRKIYDIFEIDGVSGRIILKGVLDFEETGIYKLDVEAS 323
Query: 62 DRG 64
D+G
Sbjct: 324 DKG 326
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGE------ICIAQDLDFESRSSYEFPV 58
+A DPD GVNA+ YTL S +HF + + GE + + + LD E + V
Sbjct: 157 AARDPDSGVNAIRTYTL----SSNDHFDLGTSQGEEDKTPFLVLKKSLDREKSKQHSLLV 212
Query: 59 VATDRGK 65
A D GK
Sbjct: 213 TAVDGGK 219
>gi|62087434|dbj|BAD92164.1| protocadherin gamma subfamily A, 3 isoform 1 precursor variant
[Homo sapiens]
Length = 961
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 290 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 349
Query: 60 ATD 62
A D
Sbjct: 350 AQD 352
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E + ++ +V
Sbjct: 185 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLV 242
Query: 60 ATDRG 64
A+D G
Sbjct: 243 ASDGG 247
>gi|14589880|ref|NP_061739.2| protocadherin gamma-A3 isoform 1 precursor [Homo sapiens]
gi|296439266|sp|Q9Y5H0.2|PCDG3_HUMAN RecName: Full=Protocadherin gamma-A3; Short=PCDH-gamma-A3; Flags:
Precursor
gi|119582340|gb|EAW61936.1| hCG1982215, isoform CRA_o [Homo sapiens]
gi|189442396|gb|AAI67820.1| Protocadherin gamma subfamily A, 3 [synthetic construct]
Length = 932
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E + ++ +V
Sbjct: 156 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|5456936|gb|AAD43717.1| protocadherin gamma A3 [Homo sapiens]
Length = 932
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E + ++ +V
Sbjct: 156 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|127138861|ref|NP_001076013.1| protocadherin gamma-A3 precursor [Pan troglodytes]
gi|62510870|sp|Q5DRB7.1|PCDG3_PANTR RecName: Full=Protocadherin gamma-A3; Short=PCDH-gamma-A3; Flags:
Precursor
Length = 932
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E R ++ +V
Sbjct: 156 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKREIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|119514187|gb|ABL75850.1| protocadherin 2A10 [Takifugu rubripes]
Length = 936
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V A DPD G N V YTLGE+P+R + F + VSG I + LDFE Y+ V A+
Sbjct: 264 VKAIDPDEGANGEVEYTLGEAPTRKIYDIFEIDGVSGRIILKGVLDFEETGIYKLDVEAS 323
Query: 62 DRG 64
D+G
Sbjct: 324 DKG 326
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGE------ICIAQDLDFESRSSYEFPV 58
+A DPD GVNA+ YTL S +HF + + GE + + + LD E + V
Sbjct: 157 AARDPDSGVNAIRTYTL----SSNDHFDLGTSQGEEDKTPFLVLKKSLDREKSKQHSLLV 212
Query: 59 VATDRGK 65
A D GK
Sbjct: 213 TAVDGGK 219
>gi|134152403|gb|AAI33709.1| PCDHGA3 protein [Homo sapiens]
Length = 693
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 260 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 319
Query: 60 ATD 62
A D
Sbjct: 320 AQD 322
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E + ++ +V
Sbjct: 155 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLV 212
Query: 60 ATDRG 64
A+D G
Sbjct: 213 ASDGG 217
>gi|133777911|gb|AAI15409.1| PCDHGA3 protein [Homo sapiens]
Length = 694
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E + ++ +V
Sbjct: 156 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|133777841|gb|AAI15410.1| PCDHGA3 protein [Homo sapiens]
Length = 694
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E + ++ +V
Sbjct: 156 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|441596380|ref|XP_004093138.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A3 [Nomascus
leucogenys]
Length = 829
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY LG PS + SVS E+ + + LD E + + +V
Sbjct: 156 TAFDPDVGMNSLQNYKLG--PSDYFSLAVNSVSEGAKYPELVLERALDREKKEIHRLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|363747345|ref|XP_003643989.1| PREDICTED: protocadherin gamma-A8-like, partial [Gallus gallus]
Length = 349
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+DPD G+N + Y+ E S +N F+++ +G I + ++LDFE RS YE V
Sbjct: 262 LLRVTATDPDDGINGNIQYSFPEISDKASNIFHLEPETGAIRLVRNLDFEERSFYELEVQ 321
Query: 60 ATDRG 64
D G
Sbjct: 322 EGDGG 326
>gi|312377967|gb|EFR24666.1| hypothetical protein AND_10582 [Anopheles darlingi]
Length = 3660
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N ++NY L +S + + HF+M G I + + LD E+ S + F VV
Sbjct: 1144 ILKVQAKDNDTGINQVINYALQTDSKNTSEHFHMDPNDGVIYLKKSLDHETLSHHHFTVV 1203
Query: 60 ATDRG 64
A+D+G
Sbjct: 1204 ASDKG 1208
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A+D D G+N + Y+ +S +HF + SG + +A+ LD E ++ Y V ATD
Sbjct: 1979 KIHATDADIGINRKIKYSFLDS--YRDHFRIAPESGIVTLAKPLDRELKAVYNLSVSATD 2036
Query: 63 RG 64
G
Sbjct: 2037 LG 2038
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+D D G V Y++ S HF + GE+ + LD E+R++YE P++A D
Sbjct: 1357 VKATDKDFGEYGRVAYSI-ISDDMQEHFAIDKERGELVTKKKLDREARAAYEVPIMAVDA 1415
Query: 64 G 64
G
Sbjct: 1416 G 1416
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D N V+YT+ E R F ++ +G I +A LD ES S+Y V A
Sbjct: 2186 ILQVRANDLDAEENGRVSYTI-ERGDRMEQFAIEPDTGYISVAGTLDRESISNYVLEVQA 2244
Query: 61 TDRGKET 67
D G T
Sbjct: 2245 RDHGVPT 2251
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR---TNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+++V A D D G N + Y L SP N F + + +G I LD E R Y+F
Sbjct: 1665 IMKVLARDADSGPNGDIRYAL--SPDVGDIVNIFDVDAHTGWISTLVPLDKEKREDYKFQ 1722
Query: 58 VVATDRGK 65
V+ATD G+
Sbjct: 1723 VLATDNGE 1730
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A D D G+NA+++Y + + R +F++ S +G I LD E + F V T
Sbjct: 577 LVIKAKDNDSGLNALLHYDILDMLPR-RYFHIDSSTGAIKTIMFLDHEKIPFFSFHVKVT 635
Query: 62 DRGK 65
D GK
Sbjct: 636 DLGK 639
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L++S +D D + V Y + G++ S+ F +KS +GE+ + + LD ES S YE V
Sbjct: 1772 VLQISTTDRDVDLKTPVEYYIISGDALSQ---FQIKS-TGEVFVVKALDRESISEYELKV 1827
Query: 59 VATDRGKET 67
+ TD GK T
Sbjct: 1828 IVTD-GKFT 1835
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+ D G+NA ++Y+ +G + R F + + +G + +A LD+E Y +
Sbjct: 2081 ILKVLATSKDTGINAEISYSIIGGNEHR--KFAINNRTGVLSLADTLDYERARDYFLTIQ 2138
Query: 60 ATDRG 64
A D G
Sbjct: 2139 AVDGG 2143
>gi|395504802|ref|XP_003756736.1| PREDICTED: protocadherin-1 [Sarcophilus harrisii]
Length = 846
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA D+
Sbjct: 503 VSASDADSGPNAQLVYSLEPEPATKGLFSISPETGEIWVKASLDREQRDSYELKVVAADQ 562
Query: 64 G 64
G
Sbjct: 563 G 563
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D GVNA ++YT ++P + +G I + +D E S F V+
Sbjct: 274 VIQVKANDSDQGVNAEIDYTFHQAPEVVRRLLRLDRATGLITVQGPIDREDVSVLRFFVL 333
Query: 60 ATDRG 64
A DRG
Sbjct: 334 AKDRG 338
>gi|410948357|ref|XP_003980907.1| PREDICTED: protocadherin gamma-A3 [Felis catus]
Length = 827
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + FY+ SV+G+I I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKVAEIFYLNSVTGDISILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|126290896|ref|XP_001377345.1| PREDICTED: protocadherin alpha-12-like [Monodelphis domestica]
Length = 822
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
M++++ASD D G+N ++Y + SP S F M SV+G+I I +LDFE ++YE V
Sbjct: 261 MIKLNASDSDKGINGEISYGIKMISPESEKCTFIMNSVTGDIRIHGELDFEDNNAYEIQV 320
Query: 59 VATDRG 64
ATDRG
Sbjct: 321 TATDRG 326
>gi|126291063|ref|XP_001378058.1| PREDICTED: protocadherin-1 [Monodelphis domestica]
Length = 1287
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA D+
Sbjct: 580 VSASDADSGSNAQLVYSLEPEPAAKGLFTISPETGEIWVKTSLDREQRDSYELKVVAADQ 639
Query: 64 G 64
G
Sbjct: 640 G 640
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D GVNA ++YT ++P + +G I + +D E S F V+
Sbjct: 351 VIQVKANDSDQGVNAEIDYTFHQAPEVVRRLLRLDRATGLITVQGPIDREDVSVLRFFVM 410
Query: 60 ATDR 63
A DR
Sbjct: 411 AKDR 414
>gi|426350324|ref|XP_004042727.1| PREDICTED: protocadherin gamma-C5-like isoform 1 [Gorilla gorilla
gorilla]
Length = 932
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPRKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|297295337|ref|XP_001094671.2| PREDICTED: protocadherin Fat 4 [Macaca mulatta]
Length = 2387
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 1678 VTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRDSYELKVVAADR 1737
Query: 64 G 64
G
Sbjct: 1738 G 1738
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G+N V+Y + +SP H + S +GE+ + L++E + +EF V+
Sbjct: 479 LITIKAQDADLGINGKVSYRIHDSP--VAHLVAIDSNTGEVTAQRSLNYEEMAGFEFQVI 536
Query: 60 ATDRGK 65
A D G+
Sbjct: 537 AEDSGQ 542
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+DPD G N V + L + P + F + + +G++ + + LD+E +YE V
Sbjct: 263 LIKLTATDPDQGPNGEVEFFLSKHMPPEVLDTFSIDAKTGQVILRRPLDYEKNPAYEVDV 322
Query: 59 VATDRG 64
A D G
Sbjct: 323 QARDLG 328
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 1449 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 1508
Query: 60 ATDRG 64
A DRG
Sbjct: 1509 AKDRG 1513
>gi|403255779|ref|XP_003920588.1| PREDICTED: protocadherin-1 [Saimiri boliviensis boliviensis]
Length = 1003
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 291 IAEVTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRDSYELKVVA 350
Query: 61 TDRG 64
DRG
Sbjct: 351 ADRG 354
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 65 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 124
Query: 60 ATDRG 64
A DRG
Sbjct: 125 AKDRG 129
>gi|402872826|ref|XP_003900300.1| PREDICTED: protocadherin gamma-A3 [Papio anubis]
Length = 830
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I ++LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKNLDYEDAMFYEIKIE 320
Query: 60 ATD 62
D
Sbjct: 321 VQD 323
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + Q LD E + ++ +V
Sbjct: 156 TAFDPDVGMNSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLEQALDREKKEIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|296193044|ref|XP_002806641.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-1 [Callithrix
jacchus]
Length = 1291
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 568 IAEVTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRDSYELKVVA 627
Query: 61 TDRG 64
DRG
Sbjct: 628 ADRG 631
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 343 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 402
Query: 60 ATDRG 64
A DRG
Sbjct: 403 AKDRG 407
>gi|355764913|gb|EHH62335.1| hypothetical protein EGM_20636 [Macaca fascicularis]
Length = 1310
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 558 IAEVTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRDSYELKVVA 617
Query: 61 TDRG 64
DRG
Sbjct: 618 ADRG 621
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVA 60
L+V A+D D G NA + YT ++P + +G I + +D E S+ F V+A
Sbjct: 358 LQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLA 417
Query: 61 TDRG 64
DRG
Sbjct: 418 KDRG 421
>gi|326673349|ref|XP_003199851.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 791
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+DPD GVN V YT G + R H F + V+GEI + +DFE Y ++A+
Sbjct: 264 VNATDPDEGVNGEVEYTYGRNVQRKVHDMFELDKVTGEIRVKGKIDFEENEIYSLNIMAS 323
Query: 62 DRGK 65
D+G+
Sbjct: 324 DKGR 327
>gi|410909630|ref|XP_003968293.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
Length = 4673
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-------SPSRTNHFYMKSVSGEICIAQDLDFESRSS 53
+L+V A D D G+N V Y+LG+ S + N F + S SG I +DLD ES SS
Sbjct: 2898 ILQVQALDADSGINGQVRYSLGDLIRSESDSGALFNTFSIDSKSGWISTLKDLDHESASS 2957
Query: 54 YEFPVVATDRG 64
Y F VVA+D G
Sbjct: 2958 YVFTVVASDLG 2968
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L VSA+D D N +++Y + + T++F++ S SG I A+ LD E Y+F VVAT
Sbjct: 2368 LHVSATDKDSDKNNIIHYQIFSDHNSTDYFHIDSSSGLILTARLLDHELLQRYDFVVVAT 2427
Query: 62 DRG 64
D G
Sbjct: 2428 DNG 2430
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D GVNA V Y+L P ++ F + SGEI + LD E SY A
Sbjct: 3117 VLRVGATDADLGVNAWVQYSL-HGPG-SHDFRIDPDSGEIKTSVILDRELTDSYRLLAQA 3174
Query: 61 TDRG 64
TD G
Sbjct: 3175 TDGG 3178
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G +V Y+L + R+ F + SG + + + LD E +S+Y V A
Sbjct: 3219 LTRVPAIDPDEGPGRIVTYSLVDDAGRS--FSIDKTSGILVLERFLDREVQSTYRVTVRA 3276
Query: 61 TDRGKETQ 68
TD G T+
Sbjct: 3277 TDWGAPTR 3284
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V+A D D G NA + Y++ E+ ++ N F+++ G I ++ DL+ S Y V A
Sbjct: 1646 VVQVTALDKDKGRNADLQYSI-EAGNKGNTFHIEPTLGIITVSHDLNLSSIGHYVLTVRA 1704
Query: 61 TDRG 64
TD G
Sbjct: 1705 TDHG 1708
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+ D G NA + Y++ S + F+++ +G I ++Q LD+E+ Y V A
Sbjct: 3324 VLRVHAASKDIGTNAEITYSI-RSGNEHGKFHIQPRTGAILVSQPLDYETCRDYFLTVEA 3382
Query: 61 TDRG 64
D G
Sbjct: 3383 RDGG 3386
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + DPD G V Y+L F + SG I + ++LD+E++ Y V A
Sbjct: 1015 LAWLETQDPDLGSGGQVQYSLAND--YNGWFEVDRTSGAIRLMKELDYETQQFYNLSVKA 1072
Query: 61 TDRGK 65
DRGK
Sbjct: 1073 KDRGK 1077
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D + + Y++ + S F + +G I LD E++ SY V A
Sbjct: 1122 LLQVTANDDDASRDGEIQYSIRDG-SGLGRFAINEETGMIYTTDILDRETKDSYWLTVYA 1180
Query: 61 TDRG 64
TDRG
Sbjct: 1181 TDRG 1184
>gi|332862483|ref|XP_003317925.1| PREDICTED: protocadherin-1-like, partial [Pan troglodytes]
Length = 445
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 121 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 180
Query: 61 TDRG 64
DRG
Sbjct: 181 ADRG 184
>gi|326673301|ref|XP_003199828.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 789
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+DPD GVN V YT G + R H F + V+GEI + +DFE Y ++A+
Sbjct: 264 VNATDPDEGVNGEVEYTYGRNVQRKVHDMFELDKVTGEIRVKGKIDFEENEIYSLNIMAS 323
Query: 62 DRGK 65
D+G+
Sbjct: 324 DKGR 327
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEF 56
+ VSA+D D NA++ Y + ++ S + F + S +G I + DFE+ ++F
Sbjct: 475 IFSVSATDKDKNENAVIVYQIIRGDQTQSDMSSFLNINSETGVISALKSFDFETVKKFQF 534
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 535 HILATDSG 542
>gi|380798731|gb|AFE71241.1| protocadherin-1 isoform 2 precursor, partial [Macaca mulatta]
Length = 1231
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 519 IAEVTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRDSYELKVVA 578
Query: 61 TDRG 64
DRG
Sbjct: 579 ADRG 582
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 293 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 352
Query: 60 ATDRG 64
A DRG
Sbjct: 353 AKDRG 357
>gi|402872865|ref|XP_003900316.1| PREDICTED: protocadherin-1 [Papio anubis]
Length = 1237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 525 IAEVTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRDSYELKVVA 584
Query: 61 TDRG 64
DRG
Sbjct: 585 ADRG 588
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|355691697|gb|EHH26882.1| hypothetical protein EGK_16962 [Macaca mulatta]
Length = 1255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 515 IAEVTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRDSYELKVVA 574
Query: 61 TDRG 64
DRG
Sbjct: 575 ADRG 578
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 289 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 348
Query: 60 ATDRG 64
A DRG
Sbjct: 349 AKDRG 353
>gi|380803777|gb|AFE73764.1| protocadherin gamma-A3 isoform 1 precursor, partial [Macaca
mulatta]
Length = 696
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I ++LD+E YE +
Sbjct: 140 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKNLDYEDAMFYEIKIE 199
Query: 60 ATD 62
A D
Sbjct: 200 AQD 202
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + Q LD E + ++ +V
Sbjct: 35 TAFDPDVGMNSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLEQALDREKKEIHQLVLV 92
Query: 60 ATDRG 64
A+D G
Sbjct: 93 ASDGG 97
>gi|194373915|dbj|BAG62270.1| unnamed protein product [Homo sapiens]
Length = 681
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 146 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 205
Query: 61 TDRG 64
DRG
Sbjct: 206 ADRG 209
>gi|158260047|dbj|BAF82201.1| unnamed protein product [Homo sapiens]
Length = 1060
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 525 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 584
Query: 61 TDRG 64
DRG
Sbjct: 585 ADRG 588
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|426229764|ref|XP_004008953.1| PREDICTED: protocadherin-1 [Ovis aries]
Length = 1003
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 294 VTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRESYELKVVAADR 353
Query: 64 G 64
G
Sbjct: 354 G 354
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 65 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 124
Query: 60 ATDRG 64
A DRG
Sbjct: 125 AKDRG 129
>gi|363738902|ref|XP_003642091.1| PREDICTED: protocadherin gamma-A2-like [Gallus gallus]
Length = 988
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L ++A+DPD G NA V YT+ + + F++++ +G I +A++LDFE SYEF V
Sbjct: 413 LLTITATDPDDGTNADVKYTVKVATEMASKLFHLEAETGAIKVARNLDFEEEDSYEFEVQ 472
Query: 60 ATDRGK 65
A D G+
Sbjct: 473 ARDAGE 478
>gi|449475315|ref|XP_002186680.2| PREDICTED: protocadherin-1 [Taeniopygia guttata]
Length = 1193
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA+D D G NA + Y+L PS F + SGEI + LD E R YEF VVA
Sbjct: 657 VMEVSATDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVA 716
Query: 61 TDRGKETQ 68
D+G ++
Sbjct: 717 EDKGSPSK 724
>gi|194385446|dbj|BAG65100.1| unnamed protein product [Homo sapiens]
Length = 1038
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 503 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 562
Query: 61 TDRG 64
DRG
Sbjct: 563 ADRG 566
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 277 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 336
Query: 60 ATDRG 64
A DRG
Sbjct: 337 AKDRG 341
>gi|387675|gb|AAA36419.1| protocadherin 42 [Homo sapiens]
Length = 1026
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 491 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 550
Query: 61 TDRG 64
DRG
Sbjct: 551 ADRG 554
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 265 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 324
Query: 60 ATDRG 64
A DRG
Sbjct: 325 AKDRG 329
>gi|27754771|ref|NP_002578.2| protocadherin-1 isoform 1 precursor [Homo sapiens]
gi|215273864|sp|Q08174.2|PCDH1_HUMAN RecName: Full=Protocadherin-1; AltName: Full=Cadherin-like protein
1; AltName: Full=Protocadherin-42; Short=PC42; Flags:
Precursor
gi|24081074|gb|AAH35812.1| Protocadherin 1 [Homo sapiens]
gi|119582306|gb|EAW61902.1| protocadherin 1 (cadherin-like 1), isoform CRA_c [Homo sapiens]
gi|325463529|gb|ADZ15535.1| protocadherin 1 [synthetic construct]
Length = 1060
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 525 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 584
Query: 61 TDRG 64
DRG
Sbjct: 585 ADRG 588
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|139947544|ref|NP_001077124.1| protocadherin-1 [Bos taurus]
gi|134025143|gb|AAI34617.1| PCDH1 protein [Bos taurus]
gi|296485283|tpg|DAA27398.1| TPA: protocadherin 1 [Bos taurus]
Length = 1060
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 528 VTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRESYELKVVAADR 587
Query: 64 G 64
G
Sbjct: 588 G 588
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|432090244|gb|ELK23677.1| Protocadherin alpha-2 [Myotis davidii]
Length = 3484
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASDPD G N V+Y+ P + F + S SGEI I +LDFE SY+ +
Sbjct: 2537 VIRLNASDPDEGTNQEVSYSFNSFVPPMVMDQFSIDSNSGEIKIRNNLDFEKVKSYKIRI 2596
Query: 59 VATDRG 64
ATDRG
Sbjct: 2597 DATDRG 2602
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D +N + Y+ SPS F M +GEI + +DFE ++YE V
Sbjct: 2948 VIRLNASDADEEINKELIYSFSSLVSPSIRRKFLMNERTGEIRVNDAIDFEDSNAYEIHV 3007
Query: 59 VATDRG 64
TD+G
Sbjct: 3008 DVTDKG 3013
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+ASD D GVN + Y+ S + F++ V+G I + +LDFE YE V AT
Sbjct: 1573 VNASDLDEGVNKDIVYSFNADTSADTLSKFHLDPVNGYIRVKGNLDFEDTKLYEIQVEAT 1632
Query: 62 DRG 64
D+G
Sbjct: 1633 DKG 1635
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLG-ESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++ASD D GVN V + G + P +F + S SGEI + +LD+E SYE V A
Sbjct: 264 LNASDADEGVNGEVVFFFGSDVPVNIRKNFKIDSSSGEIRLIGELDYEETRSYEIQVKAV 323
Query: 62 DRG 64
D+G
Sbjct: 324 DKG 326
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++++SD D G N+ + Y+ T F + +GEI LD+E SYE V
Sbjct: 792 VIKLNSSDADEGSNSEIVYSFSSDVPSTIKTKFKIDPSTGEIRTKGQLDYEVAKSYEIQV 851
Query: 59 VATDRG 64
+A D+G
Sbjct: 852 LAYDKG 857
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+N + Y + + F + S SGEI + +LD+E + YE +
Sbjct: 2042 VIKLNASDADEGINKEIVYLFSNLVLDNVKSKFTINSNSGEITVKGELDYEDCNLYEINI 2101
Query: 59 VATDR 63
A D+
Sbjct: 2102 DAVDK 2106
>gi|193786767|dbj|BAG52090.1| unnamed protein product [Homo sapiens]
Length = 1003
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 291 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 350
Query: 61 TDRG 64
DRG
Sbjct: 351 ADRG 354
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 65 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 124
Query: 60 ATDRG 64
A DRG
Sbjct: 125 AKDRG 129
>gi|119582307|gb|EAW61903.1| protocadherin 1 (cadherin-like 1), isoform CRA_d [Homo sapiens]
Length = 1048
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 513 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 572
Query: 61 TDRG 64
DRG
Sbjct: 573 ADRG 576
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 287 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 346
Query: 60 ATDRG 64
A DRG
Sbjct: 347 AKDRG 351
>gi|410948373|ref|XP_003980915.1| PREDICTED: protocadherin-1 [Felis catus]
Length = 1003
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 294 VTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRDSYELKVVAADR 353
Query: 64 G 64
G
Sbjct: 354 G 354
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 65 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDVSTLRFSVL 124
Query: 60 ATDRG 64
A DRG
Sbjct: 125 AKDRG 129
>gi|441597547|ref|XP_003266402.2| PREDICTED: protocadherin-1 [Nomascus leucogenys]
Length = 1234
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 522 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 581
Query: 61 TDRG 64
DRG
Sbjct: 582 ADRG 585
>gi|397517940|ref|XP_003829161.1| PREDICTED: protocadherin-1 [Pan paniscus]
Length = 1003
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 291 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 350
Query: 61 TDRG 64
DRG
Sbjct: 351 ADRG 354
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 65 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 124
Query: 60 ATDRG 64
A DRG
Sbjct: 125 AKDRG 129
>gi|395736319|ref|XP_003776734.1| PREDICTED: protocadherin-1 isoform 1 [Pongo abelii]
Length = 1060
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 525 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 584
Query: 61 TDRG 64
DRG
Sbjct: 585 ADRG 588
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|27754773|ref|NP_115796.2| protocadherin-1 isoform 2 precursor [Homo sapiens]
gi|119582305|gb|EAW61901.1| protocadherin 1 (cadherin-like 1), isoform CRA_b [Homo sapiens]
Length = 1237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 525 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 584
Query: 61 TDRG 64
DRG
Sbjct: 585 ADRG 588
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|440892170|gb|ELR45485.1| Protocadherin-1, partial [Bos grunniens mutus]
Length = 1227
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 518 VTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRESYELKVVAADR 577
Query: 64 G 64
G
Sbjct: 578 G 578
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 289 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 348
Query: 60 ATDRG 64
A DRG
Sbjct: 349 AKDRG 353
>gi|426350376|ref|XP_004042752.1| PREDICTED: protocadherin-1 [Gorilla gorilla gorilla]
Length = 1237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 525 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 584
Query: 61 TDRG 64
DRG
Sbjct: 585 ADRG 588
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|395817806|ref|XP_003782340.1| PREDICTED: protocadherin gamma-A3 [Otolemur garnettii]
Length = 833
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + H F + SV+G+I I ++LD+E YE +
Sbjct: 259 LLTVNATDPDEGFNAQVSYILDKMPGKITHIFDLDSVTGDILILKNLDYEDAKFYEIQIE 318
Query: 60 ATD 62
A D
Sbjct: 319 AHD 321
>gi|395736321|ref|XP_003776735.1| PREDICTED: protocadherin-1 isoform 2 [Pongo abelii]
Length = 1076
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 541 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 600
Query: 61 TDRG 64
DRG
Sbjct: 601 ADRG 604
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 315 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 374
Query: 60 ATDRG 64
A DRG
Sbjct: 375 AKDRG 379
>gi|338713594|ref|XP_001502083.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin-1 [Equus caballus]
Length = 1252
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 543 VTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRDSYELKVVAADR 602
Query: 64 G 64
G
Sbjct: 603 G 603
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 314 VIQVKADDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 373
Query: 60 ATDRG 64
A DRG
Sbjct: 374 AKDRG 378
>gi|332822193|ref|XP_003310925.1| PREDICTED: protocadherin-1 isoform 2 [Pan troglodytes]
Length = 1237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 525 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 584
Query: 61 TDRG 64
DRG
Sbjct: 585 ADRG 588
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|195325644|gb|ACF95730.1| protocadherin-1 [Mustela putorius furo]
Length = 654
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 282 VTASDADSGSNAELVYSLEPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADR 341
Query: 64 G 64
G
Sbjct: 342 G 342
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 53 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 112
Query: 60 ATDRG 64
A DRG
Sbjct: 113 AKDRG 117
>gi|327270347|ref|XP_003219951.1| PREDICTED: protocadherin-1-like [Anolis carolinensis]
Length = 1234
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA+D D G NA + Y+L PS F + SGEI + LD E R YEF VVA
Sbjct: 526 VMEVSATDADSGSNAKLVYSLVAEPSSKGIFSIDPESGEIRVKTVLDREQRERYEFLVVA 585
Query: 61 TDRG 64
D+G
Sbjct: 586 ADKG 589
>gi|119582304|gb|EAW61900.1| protocadherin 1 (cadherin-like 1), isoform CRA_a [Homo sapiens]
Length = 1225
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 513 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 572
Query: 61 TDRG 64
DRG
Sbjct: 573 ADRG 576
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 287 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 346
Query: 60 ATDRG 64
A DRG
Sbjct: 347 AKDRG 351
>gi|395817371|ref|XP_003782145.1| PREDICTED: protocadherin-1 [Otolemur garnettii]
Length = 1237
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 528 VTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRDSYELKVVAADR 587
Query: 64 G 64
G
Sbjct: 588 G 588
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|156398552|ref|XP_001638252.1| predicted protein [Nematostella vectensis]
gi|156225371|gb|EDO46189.1| predicted protein [Nematostella vectensis]
Length = 1852
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
M+ V+ASD D G NA + Y+ + TNH F + +V+G + +++ LDFE RSSY +
Sbjct: 290 MVTVTASDKDNGNNADLRYSF--TSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLS 347
Query: 60 ATDRG 64
TDRG
Sbjct: 348 VTDRG 352
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A+D D G NA + Y L SR + F + + SG I +AQ LD E++S+Y+ + A
Sbjct: 1637 FKLAATDADEGTNARITYNL----SRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQAR 1692
Query: 62 DRGKETQ 68
D G Q
Sbjct: 1693 DHGTPPQ 1699
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV ASDPD G N V Y++ S + N F + S +G I + +D E+ +SY + A
Sbjct: 1222 ILRVLASDPDAGANGRVTYSI-ISGNHGNAFRIDSTTGRITVVGVVDREALASYNLTISA 1280
Query: 61 TDRG 64
D G
Sbjct: 1281 KDSG 1284
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L V+A D D G NA++ Y++ G R F + S SG I LDFE +S Y V
Sbjct: 1431 VLTVAADDSDVGANAVLRYSIISGNDEKR---FKINSTSGVIMTTTPLDFEEKSQYGLEV 1487
Query: 59 VATD 62
ATD
Sbjct: 1488 TATD 1491
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 4 VSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y+L GE N F M S +GEI LD E++ SY + A
Sbjct: 91 VTATDRDSGTNAAITYSLFSGE-----NKFMMNSKTGEIRTVTPLDHETKDSYTMRISAF 145
Query: 62 DRGKET 67
D GK T
Sbjct: 146 D-GKHT 150
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +V+A+D D G NA V Y L S T+ F + +G + + LD E ++SY V A
Sbjct: 1118 VAKVTATDRDEGENAKVTYEL--SVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTA 1175
Query: 61 TDRGKETQ 68
D GK +Q
Sbjct: 1176 MDHGKPSQ 1183
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ ASD D G+NA + ++L + ++ F + + +G+I LD E ++ Y +
Sbjct: 1738 VMRILASDADTGLNAELTFSLLSNEHKS-VFTLDNTTGDISTKVPLDREQQAVYTLRIGV 1796
Query: 61 TDRGK 65
D+G
Sbjct: 1797 ADKGN 1801
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+++A+D D G N V Y + S ++ N F + SG + + LD E+ SY V A+D
Sbjct: 810 QLTATDRDIGPNGAVTYAI-ISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASD 868
Query: 63 RGKETQ 68
G Q
Sbjct: 869 AGSPQQ 874
>gi|449676476|ref|XP_002167194.2| PREDICTED: protocadherin Fat 3-like [Hydra magnipapillata]
Length = 2629
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A D D G+N+M++Y+ ES + +HF++ S +G+I Q LD E++S Y V A D
Sbjct: 459 VKAKDSDQGLNSMISYSF-ESNNEVSHFFINSRTGDILTTQLLDAETKSEYLLKVTAADH 517
Query: 64 GKETQ 68
GK ++
Sbjct: 518 GKPSK 522
>gi|18848252|gb|AAH24121.1| Pcdh1 protein, partial [Mus musculus]
Length = 965
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 433 VTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADR 492
Query: 64 G 64
G
Sbjct: 493 G 493
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 204 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 263
Query: 60 ATDRG 64
A DRG
Sbjct: 264 AKDRG 268
>gi|14196465|ref|NP_114400.1| protocadherin gamma-A3 isoform 2 precursor [Homo sapiens]
gi|5457068|gb|AAD43770.1|AF152510_1 protocadherin gamma A3 short form protein [Homo sapiens]
gi|119582344|gb|EAW61940.1| hCG1982215, isoform CRA_s [Homo sapiens]
Length = 829
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E + ++ +V
Sbjct: 156 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|148678151|gb|EDL10098.1| protocadherin 1 [Mus musculus]
Length = 1038
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 506 VTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADR 565
Query: 64 G 64
G
Sbjct: 566 G 566
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 277 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 336
Query: 60 ATDRG 64
A DRG
Sbjct: 337 AKDRG 341
>gi|348520342|ref|XP_003447687.1| PREDICTED: protocadherin-12 [Oreochromis niloticus]
Length = 1166
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ A+DPD G N V Y+ + P FY+ +GE+ I LD+E++SSYE V
Sbjct: 257 VIKLKATDPDQGANGEVEYSFSKHTHPEVQRLFYVDPQTGEVSIRAPLDYEAQSSYEVIV 316
Query: 59 VATDRG 64
A+DRG
Sbjct: 317 QASDRG 322
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D ++ V+Y++ E ++T F + +G I + Q LD+E+ +Y F V A
Sbjct: 476 ILKVEAHDEDLELSGKVSYSIAEE-AKTQPFSIHPKTGVISVQQPLDYEAFKNYSFIVEA 534
Query: 61 TDRG 64
D G
Sbjct: 535 VDHG 538
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 11/66 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD G N++ NY+L S HF + G E+ + Q+LD E ++S++ +
Sbjct: 153 AVDPDAGSNSLQNYSL----SVNQHFDLDVTVGPGGTKQAELVVVQELDREIQASFDLTL 208
Query: 59 VATDRG 64
VA D+G
Sbjct: 209 VAWDKG 214
>gi|34328319|ref|NP_083633.2| protocadherin-1 precursor [Mus musculus]
gi|25955513|gb|AAH40402.1| Protocadherin 1 [Mus musculus]
Length = 1038
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 506 VTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADR 565
Query: 64 G 64
G
Sbjct: 566 G 566
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 277 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 336
Query: 60 ATDRG 64
A DRG
Sbjct: 337 AKDRG 341
>gi|344265576|ref|XP_003404859.1| PREDICTED: protocadherin gamma-A3-like [Loxodonta africana]
Length = 843
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+DPD G NA V+Y L + P + + + SV+G++ I + LD+E YE +
Sbjct: 261 LLRVNATDPDEGFNAQVSYILDKMPGKIAQIFDLDSVTGDVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AKD 323
>gi|301753477|ref|XP_002912632.1| PREDICTED: protocadherin-1-like [Ailuropoda melanoleuca]
Length = 1231
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 522 VTASDADSGSNAELVYSLEPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADR 581
Query: 64 G 64
G
Sbjct: 582 G 582
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 293 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 352
Query: 60 ATDRG 64
A DRG
Sbjct: 353 AKDRG 357
>gi|359318968|ref|XP_003638960.1| PREDICTED: protocadherin-1-like isoform 1 [Canis lupus familiaris]
Length = 1055
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 523 VTASDADSGSNAELVYSLEPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADR 582
Query: 64 G 64
G
Sbjct: 583 G 583
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 294 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 353
Query: 60 ATDRG 64
A DRG
Sbjct: 354 AKDRG 358
>gi|397517952|ref|XP_003829167.1| PREDICTED: protocadherin gamma-A3 [Pan paniscus]
Length = 829
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E R ++ +V
Sbjct: 156 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKREIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|355709467|gb|AES03601.1| protocadherin 1 [Mustela putorius furo]
Length = 1224
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 515 VTASDADSGSNAELVYSLEPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADR 574
Query: 64 G 64
G
Sbjct: 575 G 575
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 286 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 345
Query: 60 ATDRG 64
A DRG
Sbjct: 346 AKDRG 350
>gi|281345404|gb|EFB20988.1| hypothetical protein PANDA_000345 [Ailuropoda melanoleuca]
Length = 1211
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 502 VTASDADSGSNAELVYSLEPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADR 561
Query: 64 G 64
G
Sbjct: 562 G 562
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 273 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 332
Query: 60 ATDRG 64
A DRG
Sbjct: 333 AKDRG 337
>gi|350581226|ref|XP_003354380.2| PREDICTED: protocadherin-1 [Sus scrofa]
Length = 1247
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 538 VTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIRVRTSLDREQRDSYELKVVAADR 597
Query: 64 G 64
G
Sbjct: 598 G 598
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 309 VVQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 368
Query: 60 ATDRG 64
A DRG
Sbjct: 369 AKDRG 373
>gi|432933149|ref|XP_004081829.1| PREDICTED: protocadherin-8-like [Oryzias latipes]
Length = 965
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV A DPD GVN V Y LG S F++ S SG++ + +DFE R SYE +
Sbjct: 260 VLRVHAFDPDDGVNGEVVYALGTGVSTEAARIFHVDSHSGDVTLKARVDFEKRRSYELKI 319
Query: 59 VATDRGKET 67
A+D G+ +
Sbjct: 320 RASDSGENS 328
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTL------GESPSRTNHFYMKSVSGEICIAQDLDFESRSSY 54
+ V ASDPD G NA V+Y L G SP T + + S SG + + DFE+
Sbjct: 479 LTTVVASDPDTGKNAKVSYKLIDSEVEGGSPVST-YVSVDSHSGSLYSLRSFDFETLQQI 537
Query: 55 EFPVVATDRG 64
E + A DRG
Sbjct: 538 EVVIQAEDRG 547
>gi|359318970|ref|XP_003638961.1| PREDICTED: protocadherin-1-like isoform 2 [Canis lupus familiaris]
Length = 1232
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 523 VTASDADSGSNAELVYSLEPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADR 582
Query: 64 G 64
G
Sbjct: 583 G 583
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 294 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 353
Query: 60 ATDRG 64
A DRG
Sbjct: 354 AKDRG 358
>gi|348583147|ref|XP_003477335.1| PREDICTED: protocadherin-1-like [Cavia porcellus]
Length = 1237
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 528 VTASDADSGSNAELVYSLEPEPAAQGLFSISPENGEIRVKTSLDREQRDSYELKVVAADR 587
Query: 64 G 64
G
Sbjct: 588 G 588
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|383861450|ref|XP_003706199.1| PREDICTED: protein dachsous-like [Megachile rotundata]
Length = 2659
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+DPD GVN + Y++ E S F + +++G I A LD E ++SY F VVA
Sbjct: 1180 IMSVKATDPDQGVNGKITYSIAEETSWL--FRVDNLTGVITTAGSLDRERQNSYNFMVVA 1237
Query: 61 TDRGK 65
TD GK
Sbjct: 1238 TDSGK 1242
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASDPD G NA++ Y + ++ S F + +GEI + LD E++ +E + A D+
Sbjct: 412 VSASDPDLGKNALLRYAVVQANS---SFTVDPDTGEITTREPLDRETKGVHELVLEARDQ 468
Query: 64 G 64
G
Sbjct: 469 G 469
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ASD D G N + Y L E PSR F + S++G + +A+ LD E R+ Y + A+D
Sbjct: 730 LTASDLDSGPNGDLRYGLVAEFPSR-GSFAVDSLTGALTLARPLDREERAEYTLILKASD 788
Query: 63 RG 64
R
Sbjct: 789 RA 790
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA ++Y L S + F + +G I +AQ LD ES + V+A
Sbjct: 307 ILQVTAVDLDTGNNARLSYRLQGS----SAFRISPNTGWIYLAQILDRESLDRHALTVLA 362
Query: 61 TDRG 64
TD G
Sbjct: 363 TDNG 366
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV A D D G NA V YT+ + N F + ++G I LD E R+ Y V A
Sbjct: 515 RVRALDTDLGENASVTYTILKDRDSDGYNVFTIDPITGMIRTKAVLDHEERNVYRVSVKA 574
Query: 61 TDRGK 65
TD G+
Sbjct: 575 TDAGR 579
>gi|344265578|ref|XP_003404860.1| PREDICTED: protocadherin gamma-B3-like [Loxodonta africana]
Length = 818
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYT---LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+LRV A+DPD GVNA + YT +G++ + F + S +GE+ LDFE R SY
Sbjct: 261 LLRVMATDPDEGVNAQITYTFINIGKAARQL--FKLDSKTGELTTGGGLDFEERESYTLW 318
Query: 58 VVATDRGKET 67
V A D G T
Sbjct: 319 VEAKDGGHHT 328
>gi|403256588|ref|XP_003945269.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A3 [Saimiri
boliviensis boliviensis]
Length = 642
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SV+GE+ I + LD+E + YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVTGELSILKSLDYEDATFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|162312016|gb|ABX84114.1| hedgling [Nematostella vectensis]
Length = 3480
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
M+ V+ASD D G NA + Y+ + TNH F + +V+G + +++ LDFE RSSY +
Sbjct: 895 MVTVTASDKDNGNNADLRYSF--TSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLS 952
Query: 60 ATDRG 64
TDRG
Sbjct: 953 VTDRG 957
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV ASDPD G N V Y++ S + N F + S +G I + +D E+ +SY + A
Sbjct: 1830 ILRVLASDPDAGANGRVTYSI-ISGNHGNAFRIDSTTGRITVVGVVDREALASYNLTISA 1888
Query: 61 TDRG 64
D G
Sbjct: 1889 KDSG 1892
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A D D G NA++ Y++ S + F + S SG I LDFE +S Y V A
Sbjct: 2039 VLTVAADDSDVGANAVLRYSI-ISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTA 2097
Query: 61 TD 62
TD
Sbjct: 2098 TD 2099
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
A DPD G +V+Y + +R F + + +G I +AQ LD E++S+Y+ + A D G
Sbjct: 2351 AVDPDLGTGGVVSYRI---LTRQTEFTIDNTTGVITLAQPLDRENKSTYDLAIQARDHGT 2407
Query: 66 ETQ 68
Q
Sbjct: 2408 PPQ 2410
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 4 VSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y+L GE N F M S +GEI LD E++ SY + A
Sbjct: 592 VTATDRDSGTNAAITYSLFSGE-----NKFMMNSKTGEIRTVTPLDHETKDSYTMRISAF 646
Query: 62 DRGKET 67
D GK T
Sbjct: 647 D-GKHT 651
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +V+A+D D G NA V Y L S T+ F + +G + + LD E ++SY V A
Sbjct: 1726 VAKVTATDRDEGENAKVTYEL--SVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTA 1783
Query: 61 TDRGKETQ 68
D GK +Q
Sbjct: 1784 MDHGKPSQ 1791
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A+D D G NA + Y L SR + F + + SG I + LD E S Y V A
Sbjct: 2245 FKLAATDADEGTNARITYNL----SRNDAFMIGASSGVITNVRKLDREQVSIYTLYVQAV 2300
Query: 62 DRG 64
D+G
Sbjct: 2301 DQG 2303
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ ASD D G+NA + ++L + ++ F + + +G+I LD E ++ Y +
Sbjct: 2449 VMRILASDADTGLNAELTFSLLSNEHKS-VFTLDNTTGDISTKVPLDREQQAVYTLRIGV 2507
Query: 61 TDRG 64
D+G
Sbjct: 2508 ADKG 2511
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+++A+D D G N V Y + S ++ N F + SG + + LD E+ SY V A+D
Sbjct: 1418 QLTATDRDIGPNGAVTYAI-ISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASD 1476
Query: 63 RGKETQ 68
G Q
Sbjct: 1477 AGSPQQ 1482
>gi|440902399|gb|ELR53196.1| Protocadherin alpha-7, partial [Bos grunniens mutus]
Length = 794
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+NA + Y+ SP FY+ VSGEI + +DFE R +Y+ V
Sbjct: 260 VIKLNASDLDEGLNADIIYSFSSDASPDIKFKFYIDPVSGEITVTGHIDFEERKTYKIRV 319
Query: 59 VATDRG 64
ATD+G
Sbjct: 320 EATDKG 325
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+NA + Y+ SP FY+ VSGEI + +DFE R +Y+ V
Sbjct: 579 VIKLNASDLDEGLNADIIYSFSSDASPDIKFKFYIDPVSGEITVTGHIDFEERKTYKIRV 638
Query: 59 VATDRG 64
ATD+G
Sbjct: 639 EATDKG 644
>gi|291387528|ref|XP_002710315.1| PREDICTED: protocadherin 1 [Oryctolagus cuniculus]
Length = 1237
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 528 VTASDADSGSNAELVYSLEPEPAAKGLFTISPDNGEIRVKTSLDREQRDSYELKVVAADR 587
Query: 64 G 64
G
Sbjct: 588 G 588
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|348543886|ref|XP_003459413.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4593
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-------ESPSRTNHFYMKSVSGEICIAQDLDFESRSS 53
+++V A DPD G N V YTLG +S + + F + S +G I +DLD E+ S
Sbjct: 2842 IIQVQARDPDSGANGQVTYTLGSLIQLKEDSDTLVSTFSIDSNTGWITTRKDLDHETSPS 2901
Query: 54 YEFPVVATDRGK 65
Y F VVA+D G+
Sbjct: 2902 YTFTVVASDLGE 2913
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
L+V A+D D N++V Y + S + T +F++ S SG I A+ LD E Y+F V A
Sbjct: 2311 LQVVATDKDSEKNSVVRYQIFSNSRNNTEYFHIDSSSGLILTARMLDHELLQKYDFIVRA 2370
Query: 61 TDRG 64
TD G
Sbjct: 2371 TDNG 2374
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+ D G NA + Y++ S + F++ ++G I +AQ LD+E+ Y V A
Sbjct: 3268 VLRVYAASKDIGTNAEITYSI-RSGNEHGKFHIHPLTGAILVAQPLDYETCRDYFLTVEA 3326
Query: 61 TDRG 64
D G
Sbjct: 3327 RDGG 3330
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R+ A DPD G MV Y+L +S F + SG + + Q LD E + Y+ V A
Sbjct: 3163 LTRIQAIDPDEGPGRMVIYSLADSAG--GFFSIDKYSGIVVLEQVLDREIQPFYQITVCA 3220
Query: 61 TDRG 64
+D+G
Sbjct: 3221 SDQG 3224
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G++ + Y+L S+ F + SGEI + LD E SY+ A
Sbjct: 3061 LLRVGATDADMGISGWIQYSLHGPGSQ--DFNIDPDSGEIKSSVPLDREMTPSYQLVAQA 3118
Query: 61 TDRG 64
TD G
Sbjct: 3119 TDGG 3122
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNYT---LGESPSRTNHFYMKSVSGEICIAQDLDFESRS-SYEF 56
+L VSA D D G N + Y+ L P + N F SG I ++LDFES S S+ F
Sbjct: 491 VLTVSAVDKDKGENGYITYSISSLQPLPFKINQF-----SGVISTTEELDFESSSESFMF 545
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 546 IVRASDWG 553
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G + V Y++ + S F + +G I LD ES+ SY V A
Sbjct: 1063 LLQVTANDDDAGRDGEVQYSIRDG-SGLGRFAIDEETGVIYTTDMLDRESKDSYWLTVYA 1121
Query: 61 TDRG 64
TD G
Sbjct: 1122 TDHG 1125
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V+A D D G NA ++Y++ E+ + N F ++ V G I +A +LD S Y V
Sbjct: 1589 VVQVTALDKDKGENAELHYSI-EAGNSGNTFQVEPVLGVITVAHELDLSSIGHYILTVRV 1647
Query: 61 TDRG 64
D G
Sbjct: 1648 IDSG 1651
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V Y+L F + +G I + ++LD+E++ Y V A D+G+
Sbjct: 963 DPDLGLGGQVRYSLASD--YNGWFEVDRANGVIRLTKELDYETQQFYNLTVKAKDKGR 1018
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++ A D D +N V Y++ S R N F + +SG I + + LD E+ SY + A
Sbjct: 3373 VIQLKADDVDSQLNGAVLYSI-VSGDRHNQFLIDPLSGVIKVNKQLDRETVPSYSLAIRA 3431
Query: 61 TDRG 64
D G
Sbjct: 3432 LDSG 3435
>gi|358413186|ref|XP_003582490.1| PREDICTED: protocadherin gamma-A3-like [Bos taurus]
gi|359067554|ref|XP_003586352.1| PREDICTED: protocadherin gamma-A3-like [Bos taurus]
Length = 830
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F + SV+G++ I ++LD+E + YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYVLDKMPGKIAQIFNLNSVTGDLTILKNLDYEDATFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|47227546|emb|CAG04694.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2413
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D N +V Y + E + F + S SG+I + LD+E+ SSY ++A
Sbjct: 1205 LLRVSASDVDENKNGLVQYHVAEG-NEEGQFMIDSSSGQITLVGKLDYETTSSYSLKIIA 1263
Query: 61 TDRGKE 66
D G E
Sbjct: 1264 VDGGAE 1269
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N + +++ S F + SV+G I +A+ LD E+RSSY V A
Sbjct: 2241 VIQVFATDADEGTNGQIRFSISGS---NTDFRIYSVTGMISVARQLDREARSSYSLLVQA 2297
Query: 61 TDRG 64
TDRG
Sbjct: 2298 TDRG 2301
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V ASD D G N+ V Y+L P +N F + ++ G++ + +LD E S+Y VVA
Sbjct: 2137 VLAVHASDSDSGPNSYVEYSL-HGP-FSNKFSIGTIDGDVRLVGELDREEISNYTLTVVA 2194
Query: 61 TDRGK 65
TD+G+
Sbjct: 2195 TDKGE 2199
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+ASD D NA + Y L E F + +G I I + LD+ESR Y + A
Sbjct: 254 ILQVTASDGDEAANAEIRYFLDEE----TPFQIDPKTGTIIIKEGLDYESRREYSLTIHA 309
Query: 61 TDRG 64
D G
Sbjct: 310 VDNG 313
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I + + LD+E++S Y+ V A
Sbjct: 1313 VTATDTDSGPNADITYSITAT---NNHGTFSISPNTGSIFLVKKLDYETQSVYKLNVSAK 1369
Query: 62 DRGKETQ 68
D G+ ++
Sbjct: 1370 DNGRPSR 1376
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N +V Y+L ++P H + K G I + L+ + SSYE V+A
Sbjct: 888 IFQAKASDPDEGANGVVVYSLKQNPRGLFHIHEK--HGLITLTGPLEV-TASSYEVEVIA 944
Query: 61 TDRG 64
D G
Sbjct: 945 EDMG 948
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
VSA+DPD G N V Y + + T F++ +G+I LD E +++Y+ V A D
Sbjct: 688 VSATDPDLGRNGTVKYMITAGDAAT--FHINGNTGKISTLVPLDREEKTTYQLQVTAAD 744
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D +N + Y++ + R NHF + + +G + Q++D E + +E V A
Sbjct: 1415 VMMIVAHDTDADINGQLEYSIVQQVPRGNHFSIDASTGVLYTNQEVDREFSNLFELTVKA 1474
Query: 61 TDRG 64
TD+
Sbjct: 1475 TDQA 1478
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V A DPD G N V Y L E S T F M SG+I +A L S+ Y V A
Sbjct: 1523 LTTVVAYDPDEGANGEVEYELVEGDSGT--FIMDRYSGDIRLASQL-VPSQLVYSLTVSA 1579
Query: 61 TDRGKE 66
TD G E
Sbjct: 1580 TDHGTE 1585
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTN-HFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L +SA+D D G N + ++ E+P+ F + +SG + A +LD E ++SY V
Sbjct: 577 LLVLSATDGDLGPNGTMRFSFDAETPAAAQGRFRLDPLSGRLSTAVELDREEQASYLLHV 636
Query: 59 VATDRG 64
TD G
Sbjct: 637 QVTDGG 642
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N ++Y L S + + S G++ + Q +D E+R Y + A
Sbjct: 2345 VLQVVARDDDQGANGQLSYML--SGGNDDGAFSLSSGGQLRLTQTVDREARGEYILLITA 2402
Query: 61 TDRG 64
TD G
Sbjct: 2403 TDSG 2406
>gi|328790020|ref|XP_392300.4| PREDICTED: protein dachsous-like [Apis mellifera]
Length = 3415
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+DPD GVN + Y + E S F + +++G + A LD E +SSY+F VVA
Sbjct: 1929 VMTVRATDPDQGVNGKITYAIAEETSWL--FRVDNLTGVVTTAGPLDRERQSSYKFLVVA 1986
Query: 61 TDRGK 65
TD GK
Sbjct: 1987 TDSGK 1991
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEIC 41
V A+DPDCGVNAMVNYTL + ++S +G+IC
Sbjct: 616 VRATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDIC 653
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G N + Y++ S R F + +G + + + LDFES+ +E +V
Sbjct: 241 VLAVNATDSDAGENGRIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKERHELVIV 300
Query: 60 ATDRGKE 66
A DRG +
Sbjct: 301 ARDRGAQ 307
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASDPD G NA++ Y + ++ S F + +GEI + LD E++ +E + A D+
Sbjct: 1160 VSASDPDLGKNALLRYAVVQANS---SFTVDPDTGEIITKEPLDRETKGVHELVLEARDQ 1216
Query: 64 GKETQ 68
G ++
Sbjct: 1217 GTPSR 1221
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA ++Y L S + F + +G I +AQ LD ES + V+A
Sbjct: 1055 ILQVTAVDLDTGNNARLSYRLQGSTA----FRISPNTGWIYLAQVLDRESSDRHALTVLA 1110
Query: 61 TDRG 64
TD G
Sbjct: 1111 TDNG 1114
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV A D D G NA V YT+ + N F + ++G I LD E R+ Y V A
Sbjct: 1263 RVRALDTDLGENASVTYTILKDRDSDGYNVFTIDPITGMIRTKAVLDHEERNVYRVSVKA 1322
Query: 61 TDRGK 65
TD G+
Sbjct: 1323 TDAGR 1327
>gi|291387477|ref|XP_002710169.1| PREDICTED: protocadherin alpha 6 [Oryctolagus cuniculus]
Length = 1381
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASDPD G N ++Y SP HF + +GE+ I +LDFE +SY +
Sbjct: 826 VIRLNASDPDEGTNGAISYAFNSLVSPLVLAHFAIDPNTGEVVIQGNLDFEQVNSYRIRI 885
Query: 59 VATDRG 64
ATD+G
Sbjct: 886 DATDKG 891
>gi|291387506|ref|XP_002710179.1| PREDICTED: protocadherin gamma subfamily B, 3 [Oryctolagus
cuniculus]
Length = 833
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+DPD GVNA + Y + + F++ S +GE+ A +LDFE R SY V
Sbjct: 261 VLRVMATDPDEGVNAAITYAFVSAGTAVRQVFHLDSKTGELTTAGELDFEVRESYTMGVE 320
Query: 60 ATDRGK 65
A D G+
Sbjct: 321 AKDGGR 326
>gi|291387498|ref|XP_002710308.1| PREDICTED: protocadherin beta 15 [Oryctolagus cuniculus]
Length = 811
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++RVSA D D G N ++Y+L S + F + S+SGE+ + + LDFES SSYE +
Sbjct: 261 VVRVSARDLDAGTNGEISYSLIYSSQEISKTFALSSLSGEVRLIKKLDFESVSSYELDIE 320
Query: 60 ATDRG 64
ATD G
Sbjct: 321 ATDGG 325
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFPVVA 60
VSASD D G NA V Y+L P + + + SV SG++ + LD+E+ ++EF V A
Sbjct: 473 VSASDRDAGANAQVTYSLLPPPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRA 532
Query: 61 TDRG 64
DRG
Sbjct: 533 ADRG 536
>gi|170048314|ref|XP_001870677.1| cadherin [Culex quinquefasciatus]
gi|167870411|gb|EDS33794.1| cadherin [Culex quinquefasciatus]
Length = 3527
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N +V Y L +S + + +F+M + G I + + LD E+ S + F V+
Sbjct: 1058 ILKVQAKDNDTGINQVVTYALQTDSKNTSEYFHMDATDGVIYLKKSLDHETLSHHHFTVI 1117
Query: 60 ATDRG 64
A+DRG
Sbjct: 1118 ASDRG 1122
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A+D D GVN + Y+ +S +HF + SG + +++ LD E ++ Y V ATD
Sbjct: 1892 KIHATDADIGVNRKIKYSFIDS--YRDHFRIAPDSGIVTLSKPLDREVKALYNLTVRATD 1949
Query: 63 RGK 65
+GK
Sbjct: 1950 QGK 1952
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++++A D D G N + Y+L + N F + + +G I LD E R Y+F V+
Sbjct: 1578 IMKLTARDSDSGSNGDIRYSLSADVGDIVNIFDVDAYTGWITTLVPLDKEKREDYKFQVI 1637
Query: 60 ATDRGK 65
ATD G+
Sbjct: 1638 ATDNGQ 1643
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A D D G+NA+++Y + E R +F++ S +G I LD E + F V T
Sbjct: 544 LVIKAKDADSGLNALLHYDILEVMPR-RYFHIDSNTGAIKTIMHLDHEKIPFFSFHVKVT 602
Query: 62 DRGK 65
D GK
Sbjct: 603 DLGK 606
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+ D G+NA +NY+ +G + R F M + +G + +A LD+E Y +
Sbjct: 1994 ILKVLATSKDTGINAEINYSIIGGNEHR--KFAMNNRTGILSLADTLDYERAKDYFLTIQ 2051
Query: 60 ATDRG 64
A D G
Sbjct: 2052 AVDGG 2056
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G NA + Y++ S + N F + G I +A+DLD + S Y V A
Sbjct: 320 VVQVYAIDRDIGDNARITYSI-VSGNIGNVFNIDPTMGVISVAKDLDISALSEYMLQVKA 378
Query: 61 TDRGK 65
+D GK
Sbjct: 379 SDGGK 383
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D N V+Y + E R F ++ +G I +A LD ES S+Y V A
Sbjct: 2099 ILQVRANDMDAEENGRVSYKI-ERGDRMGQFAIEPETGYISVAGTLDRESISNYVLEVQA 2157
Query: 61 TDRGKET 67
D G T
Sbjct: 2158 RDNGLPT 2164
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+D D G ++Y++ S +F + GEI + LD E + YE P++A D
Sbjct: 1270 VKATDKDFGEYGRLSYSI-ISDEIQEYFSIDKEKGEIVTKKRLDREQKKLYEVPIMAVDA 1328
Query: 64 G 64
G
Sbjct: 1329 G 1329
>gi|392354658|ref|XP_225997.6| PREDICTED: protocadherin-1 [Rattus norvegicus]
Length = 1411
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GE+ + LD E R SYE VVA DR
Sbjct: 821 VTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEVRVKTSLDREQRDSYELKVVAADR 880
Query: 64 G 64
G
Sbjct: 881 G 881
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 592 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 651
Query: 60 ATDRG 64
A DRG
Sbjct: 652 AKDRG 656
>gi|149017380|gb|EDL76431.1| protocadherin 1 (cadherin-like 1) (predicted) [Rattus norvegicus]
Length = 869
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GE+ + LD E R SYE VVA DR
Sbjct: 534 VTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEVRVKTSLDREQRDSYELKVVAADR 593
Query: 64 G 64
G
Sbjct: 594 G 594
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 305 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 364
Query: 60 ATDRG 64
A DRG
Sbjct: 365 AKDRG 369
>gi|119895653|ref|XP_591225.3| PREDICTED: protocadherin alpha-7 [Bos taurus]
gi|297477296|ref|XP_002689291.1| PREDICTED: protocadherin alpha-7 [Bos taurus]
gi|296485257|tpg|DAA27372.1| TPA: protocadherin alpha 3 [Bos taurus]
Length = 817
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+NA + Y+ SP FY+ VSGEI + +DFE R +Y+ V
Sbjct: 260 VIKLNASDLDEGLNADIIYSFSSDASPDIKFKFYIDPVSGEITVTGHIDFEERKTYKIRV 319
Query: 59 VATDRG 64
ATD+G
Sbjct: 320 EATDKG 325
>gi|297458585|ref|XP_002684274.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-7 [Bos taurus]
gi|297477298|ref|XP_002689292.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-7 [Bos taurus]
gi|296485258|tpg|DAA27373.1| TPA: protocadherin alpha 9 [Bos taurus]
Length = 861
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+NA + Y+ SP FY+ VSGEI + +DFE R +Y+ V
Sbjct: 261 VIKLNASDLDEGLNADIIYSFSSDASPDIKFKFYIDPVSGEITVTGHIDFEERKTYKIRV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 EATDKG 326
>gi|392334153|ref|XP_001066229.3| PREDICTED: protocadherin-1, partial [Rattus norvegicus]
Length = 1121
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GE+ + LD E R SYE VVA DR
Sbjct: 484 VTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEVRVKTSLDREQRDSYELKVVAADR 543
Query: 64 G 64
G
Sbjct: 544 G 544
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 255 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 314
Query: 60 ATDRG 64
A DRG
Sbjct: 315 AKDRG 319
>gi|326673303|ref|XP_003199829.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 791
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+DPD GVN V Y G + R H F + V+GEI + +DFE Y ++A+
Sbjct: 264 VNATDPDEGVNGEVEYIYGRNVQRKVHDIFELDKVTGEIRVKGKIDFEENEIYSMNIIAS 323
Query: 62 DRGK 65
D+G+
Sbjct: 324 DKGR 327
>gi|431892534|gb|ELK02967.1| Protocadherin-1 [Pteropus alecto]
Length = 1038
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R +YE VVA DR
Sbjct: 506 VTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRENYELKVVAADR 565
Query: 64 G 64
G
Sbjct: 566 G 566
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++Y ++P + +G I + +D E S+ F V+
Sbjct: 277 VIQVKANDSDQGANAEIDYMFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 336
Query: 60 ATDRG 64
A DRG
Sbjct: 337 AKDRG 341
>gi|405953973|gb|EKC21529.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 4768
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V+A D D G+NA + Y+L ES F + S +G + +A+ +D+E+R Y V+A
Sbjct: 1330 LIQVTADDTDLGINAEIEYSLSESDGT---FVLDSHNGNLYLAKLVDYETRKVYSLKVIA 1386
Query: 61 TDRG 64
TD+G
Sbjct: 1387 TDKG 1390
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D G+N + Y+L E S ++ F + + +G I Q+LD E+RS Y V+A
Sbjct: 1786 VLTVQATDIDSGINGQLKYSLLEGNSSSD-FGIGTDNGTIYTLQNLDRETRSVYSLVVIA 1844
Query: 61 TDRGK 65
TD+ +
Sbjct: 1845 TDQAE 1849
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D GVNA V Y+L P F + +G+I ++ L+ E +Y V+ATD+
Sbjct: 1896 VSAVDIDEGVNAKVMYSLASHPV----FSISPSTGQISLSSQLNRELIQNYTLQVIATDQ 1951
Query: 64 GKETQ 68
G E++
Sbjct: 1952 GLESR 1956
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES-PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ +SA D D N+ + Y L E T+ F + SVSGEI Q LD E Y+ VV
Sbjct: 2102 VITLSAVDLDSAPNSQLTYVLREGDKGVTSLFQINSVSGEITCNQTLDREQVPQYKVLVV 2161
Query: 60 ATDRGKE 66
A D G E
Sbjct: 2162 AIDSGSE 2168
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G+N +V + + + F M SG + + ++LD+E + Y + A
Sbjct: 1995 LLQVTATDSDSGLNGVVRFFITSGDDNAD-FSMDPSSGVLRVQKNLDYERVNKYTLTIQA 2053
Query: 61 TDRG 64
D G
Sbjct: 2054 EDMG 2057
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A+D D G NA ++Y+L + F + + SG + + LD E + Y VVA
Sbjct: 2210 ILTVTATDNDSGPNAQISYSLLDDVD--GRFAINTTSGILTSQKLLDREDTALYHLTVVA 2267
Query: 61 TDRGK 65
D G
Sbjct: 2268 KDHGN 2272
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A D D G+N V YTL + ++ F++ G I + +++D+E + ++A+D+
Sbjct: 1684 VEAVDADQGLNGEVVYTLVSTWGQS-IFHLDPQMGTIRLIKNVDYEQNHLFSLTILASDK 1742
Query: 64 GKETQ 68
G +Q
Sbjct: 1743 GSPSQ 1747
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 32/50 (64%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFES 50
+++V+++D D G+NA +Y++ + + +N F + + SG I + +D E+
Sbjct: 2628 IIQVTSTDKDIGINAKAHYSIDTTANYSNLFNIDADSGNITLKSSIDREA 2677
>gi|281345413|gb|EFB20997.1| hypothetical protein PANDA_000354 [Ailuropoda melanoleuca]
Length = 2272
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + + + SV+G+I I + LD+E + YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKVAQMFDLNSVTGDISILKSLDYEDATFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+DPD G N V Y+ + + + F + S++G+I I DLD+E Y+ V
Sbjct: 1820 LLAVKATDPDEGANGEVTYSFRKVRDKMSQLFQLNSLTGDITILGDLDYEDSGFYDIDVE 1879
Query: 60 ATD----RGKETQ 68
A D R ++T
Sbjct: 1880 AHDGPGLRARKTH 1892
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D GVNA + Y +P+ T+ + + +G+I LDFE S Y V
Sbjct: 983 VLQVMATDQDEGVNAEITYAFLSAPTSTSLLFNLNPNTGDITTNGTLDFEKTSRYMLVVE 1042
Query: 60 ATDRGKET 67
A D G T
Sbjct: 1043 ARDGGMHT 1050
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SPS +K VS E+ + + LD E + ++ ++
Sbjct: 156 TAFDPDVGMNSLQNYHL--SPSDYFSLTVKHVSDGAKYPELVLERALDREQKKVHQLVLI 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|417405737|gb|JAA49570.1| Hypothetical protein [Desmodus rotundus]
Length = 1060
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L P+ F + +GEI + LD E R +YE VVA DR
Sbjct: 528 VTASDADSGSNAELVYSLEPEPAAEGLFTISPETGEIRVKTSLDREQRENYELKVVAADR 587
Query: 64 G 64
G
Sbjct: 588 G 588
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++Y ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVRANDSDQGANAEIDYMFYQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
>gi|395504724|ref|XP_003756697.1| PREDICTED: protocadherin alpha-4 [Sarcophilus harrisii]
Length = 802
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+N + Y+ SP+ N F++ V+GEI I ++DFE +EF V
Sbjct: 261 VMKMNASDLDEGLNGEIIYSFTSDVSPNVQNKFHIDQVNGEIKIKGNIDFEETKLFEFQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 EATDKG 326
>gi|307184762|gb|EFN71076.1| Protein dachsous [Camponotus floridanus]
Length = 2212
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+DPD GVN + Y + + S F + +++G I A LD ES+S Y F VVA
Sbjct: 738 VMSVKATDPDQGVNGKITYAIADETSWL--FRVDNLTGVITTAGSLDRESKSRYLFHVVA 795
Query: 61 TDRGK 65
TD GK
Sbjct: 796 TDSGK 800
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ASD D G+N + Y+L E PS+ +F + S++G + +A+ LD E R+ Y + A+D
Sbjct: 303 LTASDLDSGLNGDLRYSLVDEFPSK-GYFAVDSLTGAVTLAKQLDREERADYTLILKASD 361
Query: 63 RG 64
R
Sbjct: 362 RA 363
>gi|18087757|ref|NP_291064.1| protocadherin gamma-A3 precursor [Mus musculus]
gi|13876332|gb|AAK26086.1| protocadherin gamma A3 [Mus musculus]
gi|38173716|gb|AAH60691.1| Protocadherin gamma subfamily A, 3 [Mus musculus]
Length = 928
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+A+DPD G NA V+Y L + P + F++ SV+G+I I + LD+E YE +
Sbjct: 258 LITVNATDPDEGFNAQVSYILDKMPGKIAQVFHLNSVTGDISILKSLDYEDAVFYEIKIE 317
Query: 60 ATD 62
A D
Sbjct: 318 AQD 320
>gi|432892794|ref|XP_004075840.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4611
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-------ESPSRTNHFYMKSVSGEICIAQDLDFESRSS 53
++RV ASDPD G N V Y LG S ++ F + S SG I I DLD E+
Sbjct: 2857 VIRVQASDPDSGANGQVTYRLGSLIKSKGNSEPLSDIFNIDSNSGWIFIRTDLDHETSPF 2916
Query: 54 YEFPVVATDRGK 65
Y F VVA D G+
Sbjct: 2917 YTFTVVALDHGE 2928
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+ D G NA + YT+ S + F++ SG I +AQ LD+E+ Y V A
Sbjct: 3283 VLRVYAASKDIGTNAEITYTI-RSGNEHRRFHVHPHSGAIIVAQPLDYETCRDYFLTVEA 3341
Query: 61 TDRG 64
D G
Sbjct: 3342 RDGG 3345
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R+ A DPD G MV Y+L +S F + VSG + + LD E +S+Y+ V A
Sbjct: 3178 LTRIQAIDPDEGPGRMVVYSLTDSAGGL--FSIDHVSGVVILEHTLDREVQSTYQITVCA 3235
Query: 61 TDRG 64
+D+G
Sbjct: 3236 SDQG 3239
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N ++ Y + + + T++F++ S SG I A+ LD E +Y F V
Sbjct: 2325 VLQVIASDQDSEKNNIIRYQIFSQLHNSTDYFHIDSSSGLILTARMLDHELAHNYYFVVR 2384
Query: 60 ATDRG 64
ATD G
Sbjct: 2385 ATDNG 2389
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D GVNA + Y+L S S+ F + +GE+ LD E SY V A
Sbjct: 3076 LLTVGATDADVGVNAQIQYSLHGSGSQD--FSIDPDTGEVKSLVTLDHEKTPSYRLVVQA 3133
Query: 61 TDRGKE 66
D G +
Sbjct: 3134 MDGGGQ 3139
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V ++L F + SG I + ++LD+E++ Y V A D+G+
Sbjct: 978 DPDLGLGGQVRFSLVND--HNGWFELDKASGAIRLTKELDYETQQFYNLTVKAKDKGR 1033
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D G + ++Y++ + S F + +G I LD E++ SY V A
Sbjct: 1078 LLQVSANDDDTGRDGEIHYSIRDG-SGLGRFSIDEETGVIYTTDILDRETKDSYWLTVYA 1136
Query: 61 TDRG 64
+DRG
Sbjct: 1137 SDRG 1140
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V+A D D G NA + Y++ E+ + N F ++ V G I +A +LD + Y V
Sbjct: 1604 VVQVTALDKDKGKNAELRYSI-EAGNTGNTFRIEPVLGIISVAHNLDLTNVGHYVVTVRV 1662
Query: 61 TDRG 64
TD G
Sbjct: 1663 TDNG 1666
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ S T F + S +G + +A LD E S + + A
Sbjct: 866 IIQVEATDKDMGPNGEVMYSILTS---TTPFGINSTTGMVYVAAQLDRELTSRFTLKIEA 922
Query: 61 TDRGKE 66
DR +
Sbjct: 923 RDRADK 928
>gi|432879479|ref|XP_004073491.1| PREDICTED: protocadherin alpha-3-like [Oryzias latipes]
Length = 795
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+LR++ASD D GVN V YT E SP T F++ + +GE+ + LDFE +YE
Sbjct: 258 LLRLAASDLDEGVNGQVVYTFTEKGRLSPDDT--FFLNNETGEVTVKGSLDFEETQAYEI 315
Query: 57 PVVATDRG 64
V A D+G
Sbjct: 316 RVQARDKG 323
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS----RTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
M ++ A D D NA Y L ++P+ T+ + S +GEI + DFE +++F
Sbjct: 471 MYKLKAVDADLDENAKSTYQLIKTPNVKAQMTSLVTINSETGEITSLKSFDFEELKTFQF 530
Query: 57 PVVATDRG 64
V ATD G
Sbjct: 531 KVQATDFG 538
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A D D G NA+++Y L E P N F + + SGEI + + S+ V+ +D
Sbjct: 589 KIRAVDADSGYNALLSYHLSE-PKGNNLFRIGTSSGEIRTKRRMSDNDLKSHPLLVLVSD 647
Query: 63 RGK 65
G+
Sbjct: 648 NGE 650
>gi|194219810|ref|XP_001918052.1| PREDICTED: protocadherin gamma-A3 [Equus caballus]
Length = 830
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G N+ V+Y L + P + F++ SV+G+I I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNSQVSYILDKMPGKIAQIFHLNSVTGDISILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|432880965|ref|XP_004073738.1| PREDICTED: protocadherin-12-like [Oryzias latipes]
Length = 1149
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L++ A D D G+N V+Y +G R HF + SG I + Q LD+E RSSY F V
Sbjct: 483 ILQLKAHDEDLGLNGRVSYYIGGQNEEIRHTHFTIHPRSGVIRVQQPLDYEERSSYSFIV 542
Query: 59 VATDRG 64
A D G
Sbjct: 543 GAVDHG 548
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASDPD G N V++ L + P+ FY+ S +G++ + LD+E +SSYE +
Sbjct: 264 IIKLRASDPDLGPNGEVDFLLSKLNLPAVQKCFYVDSQTGDLIVQAPLDYEVQSSYEVII 323
Query: 59 VATDRG 64
A D G
Sbjct: 324 QAVDHG 329
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD G N + YTL S + HF ++ + E+ + ++LD E + S++ +
Sbjct: 160 AVDPDAGTNGLQAYTL----STSLHFVLEVTNAPAGIKQAELVVIKELDRELQDSFDLTM 215
Query: 59 VATDRG 64
VA D+G
Sbjct: 216 VAWDKG 221
>gi|354492229|ref|XP_003508252.1| PREDICTED: protocadherin gamma-A3-like [Cricetulus griseus]
Length = 802
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+A+DPD G NA V+Y L + P + F++ SV+G+I I + LD+E YE +
Sbjct: 255 LITVNATDPDEGFNAQVSYILDKMPGKIAQVFHLNSVTGDISILKSLDYEDAVFYEIKIE 314
Query: 60 ATD 62
A D
Sbjct: 315 AQD 317
>gi|149640364|ref|XP_001507435.1| PREDICTED: protocadherin beta-3-like [Ornithorhynchus anatinus]
Length = 783
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 4 VSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
VSA+D D G N ++Y L E RT F + +SGEI + Q LDFE++ SYEF + A
Sbjct: 264 VSATDLDAGSNGEISYALFLVTEEIRRT--FQIHPISGEIRVLQQLDFEAKQSYEFDIQA 321
Query: 61 TDRGK 65
D G+
Sbjct: 322 KDGGR 326
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 3 RVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
RV A D D G NA V+YTL S ++ + S +G I + + +D+E+ ++F V
Sbjct: 472 RVQAVDRDSGQNARVSYTLLPPEDSDLSLSSFVSINSENGNIYVLRSMDYEAIQDFQFAV 531
Query: 59 VATDRG 64
A D G
Sbjct: 532 RAADGG 537
>gi|410896880|ref|XP_003961927.1| PREDICTED: protocadherin-8-like [Takifugu rubripes]
Length = 998
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V A DPD GVN V Y L E SP F++ +G++ + +DFE R SYE +
Sbjct: 289 VLKVHAFDPDDGVNGEVTYALAEGFSPEVGRLFHVDPYTGDVTLKALVDFERRRSYELVI 348
Query: 59 VATDRG 64
A+D G
Sbjct: 349 KASDMG 354
>gi|345313200|ref|XP_003429354.1| PREDICTED: protocadherin-1 [Ornithorhynchus anatinus]
Length = 681
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA V Y+L P+ + F + SG+I + LD E R +YE V+A D
Sbjct: 129 QVAATDADAGSNAEVVYSLEPEPAARDLFSITPDSGQIRVLASLDREQREAYELKVLAAD 188
Query: 63 RG 64
RG
Sbjct: 189 RG 190
>gi|363738853|ref|XP_003642080.1| PREDICTED: protocadherin beta-4-like [Gallus gallus]
Length = 983
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D GVN ++Y +S ++ F + S +GEI IA+ LDFE+ +EF V
Sbjct: 450 VLRVVANDADEGVNGDISYQFSQSAGHSHSLFTINSRTGEIVIAKPLDFETAQKHEFTVQ 509
Query: 60 ATDRG 64
A D G
Sbjct: 510 AIDGG 514
>gi|301604928|ref|XP_002932104.1| PREDICTED: protocadherin Fat 4 [Xenopus (Silurana) tropicalis]
Length = 3255
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++ ASD D G+N MV Y + + + +N F + SV+G + IA+ LD E +SSY + A
Sbjct: 454 LIQLIASDADEGINGMVRYAIIDG-NPSNEFRIDSVTGVLSIARPLDRERKSSYTLKIQA 512
Query: 61 TDRG 64
+DRG
Sbjct: 513 SDRG 516
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R A+DPD G N+ + Y+L S N F + + GE+ + +LD E S+Y ++A
Sbjct: 350 VFRAQATDPDSGPNSYIQYSL--LGSLGNKFSIGIIDGEVRLTGELDREDISNYTLTIIA 407
Query: 61 TDRGK 65
D+G+
Sbjct: 408 KDKGE 412
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L +SA D D G N V YT+ + ++ F + V+GEI + LD E S Y V A
Sbjct: 967 ILTISAEDKDSGSNGQVEYTIFDG-NKEAFFSINRVNGEIRNTRQLDREKASQYTLSVKA 1025
Query: 61 TDRG 64
+D+G
Sbjct: 1026 SDKG 1029
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G+N+ + Y+L S + F + S SG++ + + LD E + Y + A
Sbjct: 560 ILQVVARDDDQGLNSRLTYSLA-SGNEDGAFTLSS-SGQLSLIKSLDREVKEWYSLLITA 617
Query: 61 TDRG 64
TD G
Sbjct: 618 TDAG 621
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A+D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 40 IMQLTATDADEGPNALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 97
Query: 61 TD 62
D
Sbjct: 98 DD 99
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ SD D G N ++ G S F + +G+I + LD E++ Y V+A
Sbjct: 664 ILMVNCSDSDAGQNGVIRLNGGNS-----QFTINPSTGQIISSSLLDREAKDHYTLLVIA 718
Query: 61 TDRG 64
TD G
Sbjct: 719 TDGG 722
>gi|395736277|ref|XP_003780466.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-15 [Pongo
abelii]
Length = 787
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+VSA D D G N ++Y+L S N F + S SGEI + + LDFE+ SSY+ +
Sbjct: 261 VLKVSARDLDTGTNGEISYSLYYSSQEINKPFELSSXSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
VSA+D D G NA V Y+L + + + +G + + LD+E+ ++EF V
Sbjct: 473 VSATDRDSGTNAQVTYSLLPPLDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVG 532
Query: 60 ATDRG 64
ATDRG
Sbjct: 533 ATDRG 537
>gi|156361309|ref|XP_001625460.1| predicted protein [Nematostella vectensis]
gi|156212295|gb|EDO33360.1| predicted protein [Nematostella vectensis]
Length = 460
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L ++A D D GVNA + Y L ++ + F M +G+I I Q +D+E RSSY F V A
Sbjct: 139 ILLLNARDKDEGVNAEIRYFLKDAIV-SKRFSMNDTTGQITIKQAVDYEERSSYSFEVFA 197
Query: 61 TDRGK 65
+D G+
Sbjct: 198 SDGGE 202
>gi|50927222|gb|AAH79761.1| Unknown (protein for MGC:86208) [Xenopus laevis]
Length = 1050
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA+D D G NA ++Y++ PS F + SG+I + LD E R Y+F VVA
Sbjct: 522 VMEVSATDADSGSNAQLHYSILPDPSARGVFSINPDSGQIRVNMVLDREQREHYDFHVVA 581
Query: 61 TDRG 64
D+G
Sbjct: 582 VDKG 585
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D GVNA ++Y+ ++ ++ +G I + +D E + +F V+
Sbjct: 296 VLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVI 355
Query: 60 ATDRG 64
A D+G
Sbjct: 356 AKDKG 360
>gi|449475300|ref|XP_004175474.1| PREDICTED: uncharacterized protein LOC100229528 [Taeniopygia
guttata]
Length = 1696
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++RV+A+DPD G N V Y ++ R+ F + + +GEI +A LDFE S++ V
Sbjct: 261 VVRVAAADPDEGSNGEVRYAFTQTSERSRQLFQLNATTGEIRVAGKLDFEEAKSHKMVVK 320
Query: 60 ATDRGK 65
ATD G+
Sbjct: 321 ATDGGE 326
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
VSASD D G N + Y++ + S F + +G+I + + LD+E + +YE V ATD
Sbjct: 1144 VSASDLDAGTNGEIVYSIFQNSEENLQTFKINPETGQIHLKKPLDYEEKKTYEIDVQATD 1203
Query: 63 RG 64
G
Sbjct: 1204 GG 1205
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRV---SASDPDCGVNAMVNYTLGESPSRTN-HFYMKSVSGEICIAQDLDFESRSSYEF 56
MLR+ A+D D G+NA VNY L + + + +G++ I + LD+E + E
Sbjct: 468 MLRIGSMKATDADAGINARVNYALVRDEGKEQPEVSVNAENGDVYILRPLDYEKVRALEV 527
Query: 57 PVVATDRG 64
V A D G
Sbjct: 528 TVRAADGG 535
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFP 57
SA D D G+N + NY+LG +P HF + + E+ + + LD E ++
Sbjct: 156 SAQDKDVGINGLQNYSLGPNP----HFSLAIGTAKDGVKYLELVLQRQLDREEQAELNLL 211
Query: 58 VVATDRG 64
+ ATD G
Sbjct: 212 LTATDGG 218
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRT----NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+SA+DPD G NA V Y+L P T + + + SG + + LD+E + E V
Sbjct: 1354 LSATDPDAGENAHVRYSLVPPPPGTLAAASFVSVDAESGTVRSLRPLDYEKVRALEVTVR 1413
Query: 60 ATDRG 64
A D G
Sbjct: 1414 AADGG 1418
>gi|427798291|gb|JAA64597.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Rhipicephalus pulchellus]
Length = 3724
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
R+SA+DPD GV + Y + S HF++ S +GE+ + LD E R YE PV ATD
Sbjct: 2438 RLSATDPDQGVLGRLTYAI-RSRDCALHFHINSTTGELVTQEPLDHEHRHLYEVPVSATD 2496
Query: 63 RG 64
G
Sbjct: 2497 GG 2498
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A DPD GVN + Y L E PSR F + G + + + LDF+ + +++ VVA
Sbjct: 162 LVKLNAYDPDMGVNGEIYYRLLE-PSR--QFAVHPTMGTVLLTRPLDFQKKPTHQLTVVA 218
Query: 61 TDRGKETQ 68
DRG + Q
Sbjct: 219 EDRGPKRQ 226
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L V+A D D G+NA + +++ E+ +R F + + +G + + Q LD E + + F V
Sbjct: 1737 LVVAAHDEDTGINAQLTFSIVEAWAR-RLFRIDANTGAVSLVQSLDREEQDEHNFTVAVW 1795
Query: 62 DRGK 65
D G+
Sbjct: 1796 DHGQ 1799
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+ D GVNA + Y L + HF ++ +G + +A+ LD+E SY+ V A D
Sbjct: 3144 IKATSRDVGVNAQITYALVAG-NDMGHFSIEPKTGVLRVARPLDYEETPSYQLAVEARDG 3202
Query: 64 GK 65
G+
Sbjct: 3203 GE 3204
>gi|444713195|gb|ELW54103.1| Protocadherin gamma-A7 [Tupaia chinensis]
Length = 1389
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L + A+DPD GVNA V Y + S T F + S +GE+ + LDFE R+SY V
Sbjct: 260 VLTLIATDPDEGVNAEVTYAFITTEKSVTQLFKLDSYTGELTTGEGLDFEERASYTIGVE 319
Query: 60 ATDRGKET 67
A D G T
Sbjct: 320 AKDSGHHT 327
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A D D G+N V Y+ + +P F++ S++GE+ + LD+E S YE V
Sbjct: 826 LLTVNAVDLDEGINGEVTYSFRKIAPKLLQIFHLNSITGELSTLEGLDYEESSFYEMEVQ 885
Query: 60 ATD 62
A D
Sbjct: 886 AQD 888
>gi|350581211|ref|XP_003124069.3| PREDICTED: protocadherin gamma-A3 [Sus scrofa]
Length = 828
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F + SV+G++ I + LD+E + YE +
Sbjct: 261 LLTVNATDPDDGFNAQVSYVLDKMPGKIAEIFNLDSVTGDLSILKSLDYEDATFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ +KSVS E+ + + LD E ++ ++ +
Sbjct: 156 TAFDPDVGMNSLQNYQL--SPNDYFSLAVKSVSDGTKYPELVLERALDREEKTVHQLVLT 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>gi|344265172|ref|XP_003404660.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Loxodonta
africana]
Length = 4345
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S SG I Q+LD E+R SY F V
Sbjct: 2810 VIQVTANDQDTGSDGRVSYRLAVDPGSNVHELFAIDSESGWITTLQELDSETRQSYSFYV 2869
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2870 VAYDHGQTLQ 2879
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N + Y+L ++ HF + +GE+ +A+ LD+E SSY + A
Sbjct: 3334 ILTVSATDEDGPLNNAITYSLVGG-NQLGHFTIHPKTGELQVAKALDWEQTSSYLLRLRA 3392
Query: 61 TDRGK 65
TD G+
Sbjct: 3393 TDSGQ 3397
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN +V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2081 LFQVSATDQDLGVNGVVTYAFAED---YTYFRIDPYLGDISLKKPFDYKALNKYCLKVIA 2137
Query: 61 TDRG 64
DRG
Sbjct: 2138 RDRG 2141
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ AQ+LD+E++ + V
Sbjct: 2283 VIQLLASDRDSGQNRDVSYQIVEDGSDISKFFQINGSTGEMSTAQELDYEAQQHFHMKVR 2342
Query: 60 ATDRG 64
A DRG
Sbjct: 2343 AMDRG 2347
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + +G + + ++LDFE+++ Y + A+D
Sbjct: 939 LDASDPDLGPAGEVQYILLDDVHGT--FQVDLTTGALSLEKELDFETQTGYNLSLWASDS 996
Query: 64 GK 65
GK
Sbjct: 997 GK 998
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y+ +++ F + SG + +A L+ R YE V+A D
Sbjct: 169 KVTATDADLGQNAEFYYSFN---TKSEMFAIHPTSGVVTVAGKLNVTWRGRYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L + S HF +++ +G I + + L ++ E V A+D
Sbjct: 3129 VFARDPDQGTNAQVVYSL--TGSDEGHFSIEATTGVIRLEKPLRDRPQAVLELTVRASDL 3186
Query: 64 GKET 67
G T
Sbjct: 3187 GTPT 3190
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D NA + Y+L P + F + +GE+ + LD E + Y A
Sbjct: 3024 VLKVSAIDLDTDTNAQITYSL-HGPG-SEEFKLDPYTGELTTFRALDREKKDVYNLVAKA 3081
Query: 61 TDRG 64
TD G
Sbjct: 3082 TDGG 3085
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A D D N V YTL S T F + ++GE+ + LD ES S Y V A
Sbjct: 831 IAELKAKDADSEDNGRVRYTLL---SPTEKFSLHPLTGELVVTGHLDRESESQYILKVEA 887
Query: 61 TDRGKE 66
D+ ++
Sbjct: 888 RDQPRK 893
>gi|209969726|ref|NP_001129641.1| protocadherin 1 precursor [Xenopus laevis]
gi|15022451|dbj|BAB62263.1| axial protocadherin [Xenopus laevis]
Length = 1016
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA+D D G NA ++Y++ PS F + SG+I + LD E R Y+F VVA
Sbjct: 488 VMEVSATDADSGSNAQLHYSILPDPSARGVFSINPDSGQIRVNMVLDREQREHYDFHVVA 547
Query: 61 TDRG 64
D+G
Sbjct: 548 VDKG 551
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D GVNA ++Y+ ++ ++ +G I + +D E + +F V+
Sbjct: 262 VLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVI 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 AKDIG 326
>gi|190339069|gb|AAI62555.1| Pcdh2aa1 protein [Danio rerio]
Length = 935
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV+ASD D GVN + Y+L + ++ F + +++GE+ I L+FE R YE +
Sbjct: 260 LLRVNASDSDEGVNGEIEYSLRNKFRKGASDVFDLDNITGELKIKGGLNFEERQVYELKI 319
Query: 59 VATDRG 64
+A D+G
Sbjct: 320 LAADKG 325
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+ +SASD D G NA V+YT+ S T+ + +G + + DFES +++F
Sbjct: 474 VFSLSASDLDEGENARVSYTIDRINSDQSMTSFLSINEANGTVYSLKSFDFESLKTFQFF 533
Query: 58 VVATDRG 64
VVA D G
Sbjct: 534 VVAKDSG 540
>gi|262263225|tpg|DAA06602.1| TPA_inf: protocadherin gamma a8 isoform [Anolis carolinensis]
Length = 942
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+ A+DPD G+N V Y+L E + + + S +GEI + +LD+E S YEF V A D
Sbjct: 266 IKATDPDEGINGEVKYSLTELTKKISEMILLNSTTGEIIVVGNLDYEKSSLYEFEVEAVD 325
Query: 63 RG 64
G
Sbjct: 326 GG 327
>gi|54013402|dbj|BAD60790.1| protocadherin1-alpha-av1-vCP [Danio rerio]
Length = 935
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV+ASD D GVN + Y+L + ++ F + +++GE+ I L+FE R YE +
Sbjct: 260 LLRVNASDSDEGVNGEIEYSLRNKFRKGASDVFDLDNITGELKIKGGLNFEERQVYELKI 319
Query: 59 VATDRG 64
+A D+G
Sbjct: 320 LAADKG 325
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+ +SASD D G NA V+YT+ S T+ + +G + + DFES ++ F
Sbjct: 474 VFSLSASDLDEGENARVSYTIDRINSDQSMTSFLSINEANGTVYSLKSFDFESLKTFHFF 533
Query: 58 VVATDRG 64
VVA D G
Sbjct: 534 VVAKDSG 540
>gi|348514339|ref|XP_003444698.1| PREDICTED: protocadherin alpha-8-like [Oreochromis niloticus]
Length = 611
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V+A+DPD G N + Y+L ++ +R + F + SVSGEI + LDFE Y+ V A
Sbjct: 264 KVNATDPDEGANGELEYSLSKTLARKIYEIFELDSVSGEITLKGGLDFEDSEVYKLDVQA 323
Query: 61 TDRG 64
+D+G
Sbjct: 324 SDKG 327
>gi|327270439|ref|XP_003219997.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
Length = 805
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G NA V YT P + N F + ++GEI + ++D+E +SY+ + AT
Sbjct: 259 KVEARDLDFGTNAQVTYTFHRVPEKIRNLFQLNEITGEITVLGEIDYEKETSYDMSIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|57528978|ref|NP_001009585.1| protocadherin 2 alpha a 1 precursor [Danio rerio]
gi|54013404|dbj|BAD60791.1| protocadherin1-alpha-av1 [Danio rerio]
Length = 931
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV+ASD D GVN + Y+L + ++ F + +++GE+ I L+FE R YE +
Sbjct: 260 LLRVNASDSDEGVNGEIEYSLRNKFRKGASDVFDLDNITGELKIKGGLNFEERQVYELKI 319
Query: 59 VATDRG 64
+A D+G
Sbjct: 320 LAADKG 325
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+ +SASD D G NA V+YT+ S T+ + +G + + DFES ++ F
Sbjct: 474 VFSLSASDLDEGENARVSYTIDRINSDQSMTSFLSINEANGTVYSLKSFDFESLKTFHFF 533
Query: 58 VVATDRG 64
VVA D G
Sbjct: 534 VVAKDSG 540
>gi|443716925|gb|ELU08218.1| hypothetical protein CAPTEDRAFT_222745 [Capitella teleta]
Length = 4539
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A D D G N+ ++Y+ L E +N F + + SG+I LD E+R +YEF V
Sbjct: 2810 VLRVEAHDADTGANSDLSYSYLIEDAQISNIFALDAESGQISTLVSLDREARDTYEFSVT 2869
Query: 60 ATDRG 64
A+DRG
Sbjct: 2870 ASDRG 2874
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ V+ +D D GVNA+ +Y L E + +NHF++ + G + Q LD E F
Sbjct: 2285 IITVTTTDRDSGVNALAHYELREEAEGGAMSNHFHIDTQQGTVFTKQRLDHEHYDQLSFL 2344
Query: 58 VVATDRG 64
V+ATD G
Sbjct: 2345 VIATDHG 2351
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D A+++Y +G S F + + G I +AQ LD ES S Y ++A
Sbjct: 3333 ILKVSATDLDSAAYAVISYAIG-SGDDLGQFEVNAPDGVISVAQPLDRESLSHYSLVILA 3391
Query: 61 TDRG 64
TD G
Sbjct: 3392 TDTG 3395
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V+ASD D G+N V ++ + RT+ F + SG + + + L F ++ YE V+A
Sbjct: 135 VVQVTASDADVGINGEVYFSFLQ---RTDAFAIHPTSGLVTLTRPLSFIDQNIYELQVLA 191
Query: 61 TDRG 64
DRG
Sbjct: 192 QDRG 195
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN--HFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V+A+ D G+NA + YT+ E + N F M SG + + LD+E+ Y V
Sbjct: 3225 LLQVTATSLDTGINAQMTYTISEDNALLNLETFSMDPESGILRHQKPLDYETVREYSLTV 3284
Query: 59 VATDRGK 65
+ATD G+
Sbjct: 3285 LATDGGE 3291
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L ++A+D D G + MV Y L E + F + ++G I I LDFES+ Y A
Sbjct: 919 ILTLTANDLDLGADGMVRYALIEG--MDDKFEIDRLTGTIRIVNPLDFESKQLYNIIARA 976
Query: 61 TDR 63
DR
Sbjct: 977 RDR 979
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RVSASD D G+ VNY L ++ F M SG + + +LD E+ + Y V A
Sbjct: 3122 LMRVSASDLDLGLYRKVNYALEDNGGL---FKMDQESGIVSLNGELDREAVAQYNISVYA 3178
Query: 61 TDRG 64
D+G
Sbjct: 3179 YDQG 3182
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A D D G NA V Y++ S T F + SG I + Q LD E+ YE VVA
Sbjct: 815 IVSVKAYDDDEGTNARVMYSI---LSDTKDFTISPDSGVIKVNQQLDRETIPWYELQVVA 871
Query: 61 TDRGKE 66
+D E
Sbjct: 872 SDGALE 877
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + ASD D NA++ Y++ E P F + + +G + LD E + YEF V
Sbjct: 1766 LVIKASDMDTNSNALLRYSIVE-PEAAQLFDIDASTGSLKTKVTLDHEVAAVYEFSVQVQ 1824
Query: 62 DRGKETQ 68
D G +Q
Sbjct: 1825 DSGVPSQ 1831
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G V+Y++ S + F++ +GEI + LD E + PV ATD
Sbjct: 2498 VSASDEDRGDYGSVSYSI-VSEEALDLFWIDETTGEIFTLEALDREKHPQHLVPVAATDG 2556
Query: 64 G 64
G
Sbjct: 2557 G 2557
>gi|363738904|ref|XP_003642092.1| PREDICTED: uncharacterized protein LOC100858872 [Gallus gallus]
Length = 1229
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+DPD G N V Y+L + + + F+++S +G I + ++LD+E SYE V
Sbjct: 259 LLRVTATDPDDGTNGDVKYSLNKITQKASKIFHLESKTGAIRLVRNLDYEEGESYELLVQ 318
Query: 60 ATDRG 64
A D G
Sbjct: 319 AQDGG 323
>gi|109078984|ref|XP_001087882.1| PREDICTED: protocadherin gamma-A2-like [Macaca mulatta]
Length = 823
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G NA V Y L +SP T+ F +KS SG++ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYNAQVAYFLEKSPGETSEVFELKSTSGDLTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|402872824|ref|XP_003900299.1| PREDICTED: protocadherin gamma-A2 [Papio anubis]
Length = 823
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G NA V Y L +SP T+ F +KS SG++ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYNAQVAYFLEKSPGETSEVFELKSTSGDLTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|51092277|ref|NP_932785.1| protocadherin alpha 2 precursor [Mus musculus]
gi|13876258|gb|AAK26049.1| protocadherin alpha 2 [Mus musculus]
gi|162318310|gb|AAI56387.1| Protocadherin alpha 2 [synthetic construct]
gi|225000988|gb|AAI72669.1| Protocadherin alpha 2 [synthetic construct]
Length = 948
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + SGE+ +LD+E R+SYE V
Sbjct: 261 VMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELDYEERTSYEIQV 320
Query: 59 VATDRG 64
+A+D+G
Sbjct: 321 IASDKG 326
>gi|426350419|ref|XP_004042771.1| PREDICTED: protocadherin beta-15 [Gorilla gorilla gorilla]
Length = 571
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S N F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSQEINKPFELSSLSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L PS+ H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPSQDPHLPLTSLVSINTDNGHLFALRSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|148664769|gb|EDK97185.1| mCG140834 [Mus musculus]
Length = 796
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + SGE+ +LD+E R+SYE V
Sbjct: 261 VMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELDYEERTSYEIQV 320
Query: 59 VATDRG 64
+A+D+G
Sbjct: 321 IASDKG 326
>gi|223461503|gb|AAI41391.1| Pcdha2 protein [Mus musculus]
Length = 902
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + SGE+ +LD+E R+SYE V
Sbjct: 261 VMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELDYEERTSYEIQV 320
Query: 59 VATDRG 64
+A+D+G
Sbjct: 321 IASDKG 326
>gi|332234751|ref|XP_003266567.1| PREDICTED: protocadherin gamma-A2 [Nomascus leucogenys]
Length = 823
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G NA V Y L +SP T+ F +KS SG++ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYNAQVAYFLEKSPGETSEVFELKSTSGDLTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|47227017|emb|CAG05909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 881
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV A DPD GVN V Y L G SP F++ +GE+ + +DFE R YE +
Sbjct: 258 VLRVHAFDPDEGVNGEVTYALAAGFSPEVGRLFHVDPYTGEVTLKGLVDFERRRLYELVI 317
Query: 59 VATDRG 64
A+D G
Sbjct: 318 KASDMG 323
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
LRVSA D D G+N ++++ + + TN F + SGEI + Q L E E + +
Sbjct: 594 LRVSAEDEDEGMNKVLSFQIFQG--DTNLFRVDKDSGEIVLKQWLSAEIGDVLEIKISVS 651
Query: 62 DRGK 65
D G+
Sbjct: 652 DNGR 655
>gi|47213035|emb|CAF95304.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2845
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH---FYMKSVSGEICIAQDLDFESRSSYEFP 57
+L V+ASDPD G+N+ + Y+L S R H F + S +G++ + LD+E + YE
Sbjct: 2026 LLTVNASDPDEGMNSAIEYSL-RSKLRGIHSDPFNLDSTTGKLTVKAGLDYEEKQVYEIK 2084
Query: 58 VVATDRG 64
V+A D+G
Sbjct: 2085 VLAADKG 2091
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ VSASD D G NA ++Y+L + + T+ + +G I + DFE+ +++F V
Sbjct: 2240 VFTVSASDVDSGQNAALSYSLIRNQDLTITSFLNINEANGTISALKTFDFETLKTFQFQV 2299
Query: 59 VA 60
VA
Sbjct: 2300 VA 2301
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMV--NYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+++A+D D G N+ + +Y+L S F++ +GEI + + +++E +E V
Sbjct: 1261 VLKLNATDLDEGSNSDIVYSYSLYTSERTQQVFHLNPENGEIRVREMINYEDLKLFEMEV 1320
Query: 59 VATDRG 64
+A+D+G
Sbjct: 1321 IASDKG 1326
>gi|307179930|gb|EFN68065.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Camponotus floridanus]
Length = 3508
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRVS+ D D G+N V Y + ++ + T+ F++ + G I + Q LD E+ S+ F V+
Sbjct: 1126 VLRVSSRDNDTGINQQVRYAIQNDTENSTDLFHIDADEGVIFLKQSLDHETHESHHFTVI 1185
Query: 60 ATDRG 64
A DRG
Sbjct: 1186 AMDRG 1190
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G N V Y+ G N F + + +G I LD E + Y+F VV
Sbjct: 1645 ILKVIAHDKDLGSNGEVRYSFGSDIGELANVFAVDAYTGWISTLVQLDKEKQPEYKFQVV 1704
Query: 60 ATDRG 64
ATD G
Sbjct: 1705 ATDNG 1709
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+D D G+N + Y +S HF + + SG + +A+ LD E+++ Y + A D
Sbjct: 1959 KVHATDDDIGINRKIRYEFIDSAD--GHFLIAADSGIVTLAKPLDRETKAMYNVTIQALD 2016
Query: 63 RG 64
+G
Sbjct: 2017 QG 2018
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A D D +NA++NY + E R +F++ S +G I LD E+ + F V +
Sbjct: 612 LVIKAEDADSELNALLNYDIVEDLPR-KYFHIDSSTGAIRTVMLLDHETIPMFSFHVKVS 670
Query: 62 DRGK 65
D GK
Sbjct: 671 DLGK 674
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+ D G+NA + Y++ + F + + +G I IA+ LD+E Y + A D
Sbjct: 2063 RVLATSKDTGINADIYYSI-VGGNEHKKFQINAKTGVIIIAEQLDYERARDYFLTIQAVD 2121
Query: 63 RG 64
G
Sbjct: 2122 GG 2123
>gi|149017274|gb|EDL76325.1| rCG49385 [Rattus norvegicus]
Length = 794
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++A+D D GVN V ++ G SP F + S+SGEI + DLD+E SYE V A
Sbjct: 265 LNATDADEGVNGEVVFSFGNDVSPDIQEKFKVDSISGEIRVIGDLDYEKTKSYEIQVKAV 324
Query: 62 DRG 64
D+G
Sbjct: 325 DKG 327
>gi|386118331|gb|AFI99113.1| dachsous protocadherin [Clytia hemisphaerica]
Length = 3438
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYM-KSVSGEICIAQDLDFESRSSYEFPVV 59
+ R A+D D G N V+Y + ES R ++FYM +S+ G + + LD+E SSY V+
Sbjct: 2711 VFRAGATDKDIGENGRVSYRILESGGR-DYFYMNESIPGWVYTKRSLDYEKNSSYTLRVL 2769
Query: 60 ATDRGKETQ 68
A D GK +Q
Sbjct: 2770 AYDHGKPSQ 2778
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L V A D D NA V Y L +PSR +HF + G I + + LD+E + SY F V
Sbjct: 1867 VLNVKAVDKDTPKNAFVKYALV-NPSRDVADHFEVDVEKGAIYLIKSLDYEQQRSYTFKV 1925
Query: 59 VA 60
A
Sbjct: 1926 KA 1927
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V ASD D G+N+ ++Y++ S+ +H FY++ +G I + +D E S E V
Sbjct: 479 VLQVKASDLDAGINSRISYSIT---SKHDHRWFYIEESTGRIMLNDYVDREKTDSVEIQV 535
Query: 59 VATDRG 64
A D G
Sbjct: 536 SARDHG 541
>gi|390459333|ref|XP_003732279.1| PREDICTED: protocadherin beta-15-like [Callithrix jacchus]
Length = 787
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S T+ F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLFYSSQATSKPFELSSISGEIRLIKKLDFETTSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDTHLALASLVSINADNGHLFALRSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATD G
Sbjct: 531 VGATDGG 537
>gi|332234743|ref|XP_003266563.1| PREDICTED: protocadherin beta-15 [Nomascus leucogenys]
Length = 787
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S N F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSQEINKPFELSSLSGEIRLIKKLDFETMSSYDLEIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA + Y+L P + H + S+ +G + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQITYSL--LPPQDPHLPLASLVSINTDNGHLFALISLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|326673297|ref|XP_003199826.1| PREDICTED: protocadherin alpha-8-like [Danio rerio]
Length = 787
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+++A+D D G N +V YT G + R + F + S +GEI I LDFE Y+ V
Sbjct: 260 LLKLNATDLDEGSNGVVEYTFGRNSKRKVYDLFKLDSTTGEIQIKDVLDFEESEVYKLDV 319
Query: 59 VATDRGK 65
A+D+G+
Sbjct: 320 QASDKGQ 326
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN----HFYMKSVSGEICIAQDLDFESRSSYEF 56
+L V+ASD D NAM+ Y++ +S S N + + S +G I DFE + F
Sbjct: 474 ILSVTASDKDLDKNAMIIYSIIKSDSAQNDMASYLNINSETGVIYALNRFDFEVVKKFHF 533
Query: 57 PVVATDRG 64
V+ATD G
Sbjct: 534 HVLATDSG 541
>gi|116283803|gb|AAH30897.1| Pcdha6 protein [Mus musculus]
Length = 926
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + SGE+ +LD+E R+SYE V
Sbjct: 261 VMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELDYEERTSYEIQV 320
Query: 59 VATDRG 64
+A+D+G
Sbjct: 321 IASDKG 326
>gi|351702219|gb|EHB05138.1| Protocadherin beta-15 [Heterocephalus glaber]
Length = 685
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA D D G N ++Y+L S F + S SGE+ + + LDFE+ SSYE + A
Sbjct: 259 IVKVSARDLDTGTNGEISYSLYTSQEIAKTFELSSFSGEVRLIKLLDFETISSYELDIEA 318
Query: 61 TDRG 64
+D G
Sbjct: 319 SDGG 322
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA V Y+L P R H + S+ +G++ + LD+E+ ++EF
Sbjct: 470 ISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADTGQLFALRALDYETLRAFEFR 529
Query: 58 VVATDRG 64
V A DRG
Sbjct: 530 VGAADRG 536
>gi|427780029|gb|JAA55466.1| Putative cadherin egf lag seven-pass g-type receptor [Rhipicephalus
pulchellus]
Length = 1719
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A DPD GVN + Y L E PSR F + G + + + LDF+ + +++ VVA
Sbjct: 162 LVKLNAYDPDMGVNGEIYYRLLE-PSR--QFAVHPTMGTVLLTRPLDFQKKPTHQLTVVA 218
Query: 61 TDRGKETQ 68
DRG + Q
Sbjct: 219 EDRGPKRQ 226
>gi|387017890|gb|AFJ51063.1| Protocadherin 1 [Crotalus adamanteus]
Length = 1046
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ VSA+D D G NA + Y+L GES S+ + F + SGEI + LD E + YEF VV
Sbjct: 513 VVEVSATDADSGSNAKLIYSLAGESLSK-DTFSIDPESGEIHVKNVLDREQQERYEFLVV 571
Query: 60 ATDRG 64
ATD+G
Sbjct: 572 ATDKG 576
>gi|363738857|ref|XP_003642082.1| PREDICTED: uncharacterized protein LOC100857645 [Gallus gallus]
Length = 1680
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++RVSA+DPD G N V YT ++ + + H + + + SG I ++ LDFE S+E V
Sbjct: 187 VVRVSAADPDEGSNGKVRYTFTQASAGSQHLFDLNADSGVIRVSGKLDFEEAKSHELVVR 246
Query: 60 ATDRG 64
ATD G
Sbjct: 247 ATDGG 251
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D GVN ++Y +S R + F + S +GEI IA+ LDFE+ ++ V
Sbjct: 1124 VLRVVANDADEGVNGDISYQFSQSVGHRHSLFTINSKTGEIGIAKPLDFETEKKHKLTVQ 1183
Query: 60 ATDRG 64
A D G
Sbjct: 1184 AVDGG 1188
>gi|301621400|ref|XP_002940043.1| PREDICTED: hypothetical protein LOC100490327 [Xenopus (Silurana)
tropicalis]
Length = 4900
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRVSA+D D G N+ + Y S + N F + S+SGE+ ++LDFE YE V
Sbjct: 1081 ILRVSANDKDEGSNSQITYYFAASSKQAMNTFIIDSISGEVKTKENLDFEKIKHYEISVQ 1140
Query: 60 ATDRG 64
A D G
Sbjct: 1141 AKDGG 1145
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSA+D D G+N+ + Y S + N F + S+SG I ++LDFE YE V
Sbjct: 1882 ILYVSANDKDEGINSQIRYYFSTSSKQILNTFIINSISGAIMTKENLDFEKTKLYEISVQ 1941
Query: 60 ATDRG 64
A D G
Sbjct: 1942 AKDGG 1946
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSA+D D G+NA + Y+ S + F + ++SGEI +++DFE YE V
Sbjct: 3539 ILHVSANDKDEGINAQITYSFSATSKQASRSFAINAISGEIKTKENIDFEKTKYYEISVQ 3598
Query: 60 ATDRG 64
A D G
Sbjct: 3599 ARDGG 3603
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSASD D G+N+ + Y+ S TN F + SGE+ LDFE +YE V
Sbjct: 2722 VLYVSASDKDEGINSQLTYSFSSASKQATNAFAINPQSGEVITKDILDFEKMKNYEIAVQ 2781
Query: 60 ATDRG 64
A D G
Sbjct: 2782 AKDGG 2786
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+ASD D G NA + Y++ ++ + H F + +GEI I + LD+E+ +YE +
Sbjct: 259 VISVTASDKDEGTNAQITYSVSKTTNNALHVFSINPFNGEIKIQKHLDYEATQNYELAIQ 318
Query: 60 ATDRG 64
A D G
Sbjct: 319 AKDGG 323
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSA+D D G+N+ + Y+ S + F + S +GEI ++LDFE +YE V
Sbjct: 4357 VLCVSANDKDQGINSQITYSFSATSKQASRSFSINSETGEIKTKENLDFEKTKNYEISVQ 4416
Query: 60 ATDRG 64
A D G
Sbjct: 4417 AKDGG 4421
>gi|156368055|ref|XP_001627512.1| predicted protein [Nematostella vectensis]
gi|156214424|gb|EDO35412.1| predicted protein [Nematostella vectensis]
Length = 1677
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRVSA+D D G N + Y + ++N + + S +G I Q+LDFE ++SY F V+
Sbjct: 225 ILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVI 284
Query: 60 ATDRG 64
A+D G
Sbjct: 285 ASDGG 289
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++ASD D G N ++ Y++ + F ++S +G + +A+ LDFE+ YE + A
Sbjct: 1283 VINLNASDKDIGQNGLIKYSISNG-NLAAMFDVESATGRLIVAKSLDFETTQLYELTITA 1341
Query: 61 TDRG 64
D G
Sbjct: 1342 QDHG 1345
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+VSA+D D G N + Y + S ++ N + + + +G + LD E++S Y F V+
Sbjct: 549 VLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVL 608
Query: 60 ATDRG 64
A D G
Sbjct: 609 AKDHG 613
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R+ A D D G NA Y+L S + + F++ S +GE+ +++ LD E+ SSY V A
Sbjct: 1178 VFRIKAMDADEGDNAKFFYSL-VSGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKA 1236
Query: 61 TD 62
TD
Sbjct: 1237 TD 1238
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 3 RVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFES----RSSYEFP 57
R +ASD D G NA + +++ ++PS+T F + S + EI +D E+ R S++
Sbjct: 1390 RCTASDRDTGTNAHIAFSMYSQTPSKT--FSVNSATCEITTIAAIDLETMPAGRDSFQLV 1447
Query: 58 VVATDRG 64
V+ATD+G
Sbjct: 1448 VMATDQG 1454
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS----GEICI--AQDLDFESRSSYEFPV 58
+A+DPD G N V+YT+ S T F + + + +C+ + LD E+ Y+ +
Sbjct: 118 TATDPDAGNNGTVDYTIA-SGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNI 176
Query: 59 VATDRG 64
ATDRG
Sbjct: 177 TATDRG 182
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+++A+DPD G N V+Y++ + F + SG + A+ LD E SS + A
Sbjct: 444 VLQLNATDPDEGDNGTVSYSI-TGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITA 502
Query: 61 TDRG 64
D G
Sbjct: 503 QDHG 506
>gi|427791567|gb|JAA61235.1| Putative kugelei, partial [Rhipicephalus pulchellus]
Length = 828
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A DPD GVN + Y L E PSR F + G + + + LDF+ + +++ VVA
Sbjct: 22 LVKLNAYDPDMGVNGEIYYRLLE-PSR--QFAVHPTMGTVLLTRPLDFQKKPTHQLTVVA 78
Query: 61 TDRGKETQ 68
DRG + Q
Sbjct: 79 EDRGPKRQ 86
>gi|167526375|ref|XP_001747521.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773967|gb|EDQ87601.1| predicted protein [Monosiga brevicollis MX1]
Length = 5317
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
SA+D D GVN +V+Y++ +P +F + +V+GE+ + Q DFE+ S+E A+D+G
Sbjct: 1085 SATDADAGVNGLVSYSVNSNP----YFSINTVTGELTLLQPFDFETVQSFELICNASDQG 1140
Query: 65 K 65
+
Sbjct: 1141 E 1141
>gi|291387512|ref|XP_002710182.1| PREDICTED: protocadherin gamma subfamily B, 7 [Oryctolagus
cuniculus]
Length = 807
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D GVNA V Y+ + +T H F ++S +G I + LDFE Y V
Sbjct: 261 VLRVRATDQDEGVNAEVTYSFLAASDKTQHVFSLESTTGNIVTHKPLDFEEVKRYTMDVE 320
Query: 60 ATDRG 64
A DRG
Sbjct: 321 AKDRG 325
>gi|54019424|ref|NP_955797.1| protocadherin alpha-1 precursor [Rattus norvegicus]
gi|40645518|dbj|BAD06366.1| cadherin-related neuronal receptor 1 [Rattus norvegicus]
gi|50512316|gb|AAT77553.1| protocadherin alpha 1 [Rattus norvegicus]
Length = 948
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++A+D D GVN V ++ G SP F + S+SGEI + DLD+E SYE V A
Sbjct: 265 LNATDADEGVNGEVVFSFGNDVSPDIQEKFKVDSISGEIRVIGDLDYEKTKSYEIQVKAV 324
Query: 62 DRG 64
D+G
Sbjct: 325 DKG 327
>gi|291387668|ref|XP_002710368.1| PREDICTED: FAT tumor suppressor 2 [Oryctolagus cuniculus]
Length = 4349
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+R +Y+F V
Sbjct: 2818 VIQVTANDQDTGNDGQVSYRLSSDPGSNIHELFAIDSETGWITTLQELDCETRQNYQFYV 2877
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2878 VAYDHGQTVQ 2887
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD+E SY V A
Sbjct: 3342 VLTVSATDEDGPLNSAITYSLVGG-NQLGHFTIHPKKGELQVAKALDWEQTPSYSLRVRA 3400
Query: 61 TDRGK 65
TD G+
Sbjct: 3401 TDSGQ 3405
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GEI Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFQINGSTGEISTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A DRG
Sbjct: 2351 AMDRG 2355
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N +V Y E +F M G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGANGIVTYAFAED---YTYFRMDPYLGDISLRKPFDYQALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y +R+ F + SG + +A L+ R YE V+A D
Sbjct: 169 KVTATDADLGQNAEFYYAFN---TRSEMFAIHPTSGVVTVAGKLNVTWRGKYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D G NA V Y+L + S + F + ++ G I + Q LD +R + V A
Sbjct: 1574 LLQVRATDADRGANAEVRYSLLKGNS-VDFFSIDALLGIITVVQKLDQTNRVRHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P N F + +GE+ LD E + Y A
Sbjct: 3032 ILKVSATDLDTDTNAQITYSL-HGPG-ANEFKLDPHTGELTTFTGLDRERKDIYSLVAKA 3089
Query: 61 TDRG 64
TD G
Sbjct: 3090 TDGG 3093
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G + Y L + T F + +G + + ++LDFE R+ Y + +D
Sbjct: 947 LDASDPDLGPAGELRYVLLDDAHGT--FRVDLTTGALSLERELDFERRAGYNLSLWVSDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L +++ E V A+D
Sbjct: 3137 VFARDPDQGSNAQVVYSLTDSAE--GHFSIDATTGVIRLEKPLRVRPQAALELTVRASDL 3194
Query: 64 G 64
G
Sbjct: 3195 G 3195
>gi|224068302|ref|XP_002191697.1| PREDICTED: protocadherin beta-4-like [Taeniopygia guttata]
Length = 813
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D GVN +++Y L ++ +++ F + ++GEI I + LDFE+ ++E V
Sbjct: 255 VLTVQATDQDAGVNGVISYQLNQAVGQSDSAFLIDPITGEIKITKPLDFEAAETHEMIVR 314
Query: 60 ATDRG 64
ATD G
Sbjct: 315 ATDGG 319
>gi|262263281|tpg|DAA06582.1| TPA_inf: protocadherin beta 5 [Anolis carolinensis]
Length = 807
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV A D D G NA + Y+ + P + N F++ V+GEI + ++D+E ++YE + AT
Sbjct: 259 RVEARDLDFGSNAQITYSFYQIPEKIQNLFHLNDVTGEITVFGEVDYEKETNYEMTIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|440902398|gb|ELR53195.1| Protocadherin alpha-4, partial [Bos grunniens mutus]
Length = 715
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSA D D NA+V+Y+L E P+ +N F + + +GEI I +LDFE+ + Y+
Sbjct: 474 IFTVSARDADAQENALVSYSLVERRVGEPTISNQFRIDANTGEIVIRGNLDFENMNLYKI 533
Query: 57 PVVATDRG 64
+ ATD+G
Sbjct: 534 RIEATDKG 541
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+N + Y+ P+ + FYM ++GEI + +DFE SYE V
Sbjct: 261 VIKLNASDLDEGLNGNIIYSFSADILPTVKSKFYMDPITGEIMVKGYIDFEETKSYEILV 320
Query: 59 VATDRGK 65
D+G+
Sbjct: 321 EGIDKGQ 327
>gi|427780061|gb|JAA55482.1| Putative kugelei [Rhipicephalus pulchellus]
Length = 910
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A DPD GVN + Y L E PSR F + G + + + LDF+ + +++ VVA
Sbjct: 162 LVKLNAYDPDMGVNGEIYYRLLE-PSR--QFAVHPTMGTVLLTRPLDFQKKPTHQLTVVA 218
Query: 61 TDRGKETQ 68
DRG + Q
Sbjct: 219 EDRGPKRQ 226
>gi|351696454|gb|EHA99372.1| Protocadherin-1 [Heterocephalus glaber]
Length = 1215
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+D D G NA + Y+L P+ F + +GEI + LD E R SYE VVA DR
Sbjct: 506 VTATDADSGSNAELVYSLEPEPAAQGLFSISPENGEIRVDIPLDREQRDSYELKVVAADR 565
Query: 64 G 64
G
Sbjct: 566 G 566
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA ++YT ++P + +G I + +D E S+ F V+
Sbjct: 277 VIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 336
Query: 60 ATDRG 64
A DRG
Sbjct: 337 AKDRG 341
>gi|351696441|gb|EHA99359.1| Protocadherin beta-15 [Heterocephalus glaber]
Length = 749
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA D D G N ++Y+L S F + S SGE+ + + LDFE+ SSYE + A
Sbjct: 259 IVKVSARDLDTGTNGEISYSLYTSQEIAKTFELSSFSGEVRLIKLLDFETISSYELDIEA 318
Query: 61 TDRG 64
+D G
Sbjct: 319 SDGG 322
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA V Y+L P R H + S+ +G++ + LD+E+ ++EF
Sbjct: 470 ISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADTGQLFALRALDYETLRAFEFR 529
Query: 58 VVATDRG 64
V A DRG
Sbjct: 530 VGAADRG 536
>gi|344265076|ref|XP_003404613.1| PREDICTED: protocadherin gamma-B7-like [Loxodonta africana]
Length = 809
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D GVNA + Y+L + H F + S +G+I Q LDFE Y V
Sbjct: 261 VLRVRATDRDEGVNAEITYSLLNVADKAQHVFSLDSTTGDIITNQSLDFEDVKRYTMDVE 320
Query: 60 ATDRG 64
A DRG
Sbjct: 321 AKDRG 325
>gi|426350332|ref|XP_004042731.1| PREDICTED: protocadherin gamma-A2 [Gorilla gorilla gorilla]
Length = 823
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G NA + Y L +SP T+ F +KS SGE+ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYNAQMVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|61316298|ref|NP_001013029.1| protocadherin beta-15 precursor [Pan troglodytes]
gi|62510885|sp|Q5DRD3.1|PCDBF_PANTR RecName: Full=Protocadherin beta-15; Short=PCDH-beta-15; Flags:
Precursor
Length = 787
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S N F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSEEINKPFELSSLSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFH 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|449499705|ref|XP_004186240.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Taeniopygia
guttata]
Length = 5033
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + Y+L P N F + ++ GE+ + +LD E+ ++Y VVA
Sbjct: 2115 VFKAQATDPDSGPNSYIEYSLLPPPG--NKFSIGTIDGEVRLTGELDREAVANYTLTVVA 2172
Query: 61 TDRGK 65
TD+G+
Sbjct: 2173 TDKGQ 2177
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D GVN ++ Y++ + + N F + + +G++ + LD+E+ +SY + A
Sbjct: 1275 VLRVSASDVDEGVNGLIQYSVIKG-NEENQFVIDTSTGQVTLVGRLDYEATASYSLVIQA 1333
Query: 61 TDRG 64
D G
Sbjct: 1334 VDSG 1337
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N + Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1485 VISVTAHDPDADINGQLTYAIIQQMPRGNHFRIDEVRGTIFTNAEIDREFANLFELTVKA 1544
Query: 61 TDR 63
TD+
Sbjct: 1545 TDQ 1547
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+DPD G N V Y++ S T+ F + +G I LD E +++Y+ +VATD
Sbjct: 757 LSATDPDLGPNGTVKYSI--SAGDTSRFQVHGQTGVITTKIALDREEKTAYQLQIVATDG 814
Query: 64 G 64
G
Sbjct: 815 G 815
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + S + F + SV+G I +A+ LD E + SY V +
Sbjct: 2219 LIQVLAADGDEGTNGQVRYAI-VSGDANSEFRIDSVTGVITVAKPLDREKKPSYTLTVQS 2277
Query: 61 TDRG 64
+DRG
Sbjct: 2278 SDRG 2281
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A D D G+N +NY + E + N F + +GEI + LD E S Y + A
Sbjct: 2735 ILTVAAVDRDSGLNGQLNYEIIEGNTE-NSFSINRATGEIRSIRPLDREKLSQYTLTIKA 2793
Query: 61 TDRGKETQ 68
+D+G Q
Sbjct: 2794 SDKGIPLQ 2801
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++ Y+ + A
Sbjct: 1383 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQYLYKLNITAK 1439
Query: 62 DRGKETQ 68
D+G+ Q
Sbjct: 1440 DQGRPLQ 1446
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y + S + F + + +G + +A+ LDFE +E V ATD
Sbjct: 3159 VSARDRDAAMNGLIRYNI-SSGNEAGIFAINTTTGTLTLAKPLDFELDQKHELVVTATDG 3217
Query: 64 G 64
G
Sbjct: 3218 G 3218
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+++A D D G NA+V YT+ + F++ SGE+ + LD E RS Y V A
Sbjct: 1805 ILQLTAMDADEGANALVTYTIISGAD--DSFHIDPESGELIATKRLDRERRSKYSLLVRA 1862
Query: 61 TD 62
D
Sbjct: 1863 DD 1864
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V++SD D NA+++Y L S+ F + +G+I + LD E+R +Y VVA
Sbjct: 2429 ILLVNSSDADASTNAVISYRLMGGNSQ---FTINPSTGQIITSALLDREARENYTLVVVA 2485
Query: 61 TDRGKET 67
+D G T
Sbjct: 2486 SDGGFPT 2492
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-------FYMKSVSGEICIAQDLDFESRSS 53
+L+V+A+D D G NA + Y L F + SG I I + LD+E R
Sbjct: 265 VLQVTAADADEGTNADIRYRLEGGDGSGAGDGAGSLPFEVDPESGVIRIRERLDYEVRQQ 324
Query: 54 YEFPVVATDRG 64
Y V ATDRG
Sbjct: 325 YSLTVQATDRG 335
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN +V Y+L ++P F + +G I + LD + SY+ ++A
Sbjct: 958 IFQAKALDPDEGVNGVVLYSLKQNPK--GLFSINEQTGAISLTGPLDINA-GSYQVEILA 1014
Query: 61 TDRG 64
+D G
Sbjct: 1015 SDMG 1018
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D G+N + YT+ E F++ V+G + + LD+E++ Y V A D
Sbjct: 1909 ILATDDDSGINGEITYTISED-DEEGIFFLNPVTGVFNLTRALDYEAQQYYILTVRAEDG 1967
Query: 64 GKE 66
G +
Sbjct: 1968 GGQ 1970
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTL----------GESP-SRTNHFYMKSVSGEICIAQDLDFE 49
+L +SA+D D G N V ++L G SP + F + VSG++ LD E
Sbjct: 637 LLVLSATDGDLGDNGTVRFSLQEAEPALVAVGPSPVTPRQMFRLDPVSGKLSTISQLDRE 696
Query: 50 SRSSYEFPVVATDRG 64
+S + V+ATD G
Sbjct: 697 EQSHFSLQVLATDLG 711
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D GVN + Y++ E + G++ I +LD E + Y VVA
Sbjct: 1061 FFKVQASDKDSGVNGEIAYSIIEG--NAGDAFGIFPDGQLYIKSELDRELQERYVLLVVA 1118
Query: 61 TDRGKE 66
+DR E
Sbjct: 1119 SDRAVE 1124
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G+N+ + Y L + S SGE+ + Q LD E++ Y V A
Sbjct: 2325 ILQVVARDDDQGLNSKLTYML--VAGNEEGAFTLSGSGELRLVQSLDREAKEQYLLLVTA 2382
Query: 61 TDRG 64
D G
Sbjct: 2383 ADTG 2386
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D GVNA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2841 RVTTSDEDIGVNAVSRYSIRDT---SLPFTINPSTGDITISRPLNREDTDRYRIRVSAHD 2897
Query: 63 RG 64
G
Sbjct: 2898 SG 2899
>gi|410914515|ref|XP_003970733.1| PREDICTED: protocadherin Fat 4-like [Takifugu rubripes]
Length = 5463
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D N +V+Y + E + F + SG++ + LD+E+ SSY ++A
Sbjct: 1697 LLRVSASDVDENRNGLVHYRVAEG-NEEGQFMIDGSSGQVTLVGKLDYETTSSYSLKIIA 1755
Query: 61 TDRGKE 66
D G E
Sbjct: 1756 VDAGAE 1761
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N + +++ + ++ F + SV+G I +A+ LD E+RSSY V A
Sbjct: 2641 VIQVFATDADEGTNGQIRFSIPGGNTNSD-FRIDSVTGVISVAKQLDREARSSYSLVVQA 2699
Query: 61 TDRG 64
DRG
Sbjct: 2700 ADRG 2703
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V ASD D G N+ V Y+L P +N F + ++ G++ + +LD E S+Y VVA
Sbjct: 2537 VFAVHASDSDSGPNSYVEYSL-RGPF-SNKFSIGTIDGDVRLVGELDREELSNYTLTVVA 2594
Query: 61 TDRGK 65
TD+G+
Sbjct: 2595 TDKGE 2599
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+ASD D G NA + Y L E F + +G + I + LD+ES+ Y + A
Sbjct: 746 VLQVAASDGDEGANAEIRYFLDEG----TPFQIDPKTGTVVIKEGLDYESKREYSLTIHA 801
Query: 61 TDRG 64
D G
Sbjct: 802 VDNG 805
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L +SA+D D G N V+++ E+P+ F + ++SG + A +LD E R+SY V
Sbjct: 1069 LLVLSATDDDLGSNGTVHFSFDAETPASAQELFRLDALSGRLSTAAELDREERASYLLHV 1128
Query: 59 VATDRG 64
A D G
Sbjct: 1129 QAADGG 1134
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A D D +N + Y++ + R NHF + + +G I Q++D E + +E V A
Sbjct: 1907 VMMITAHDTDADINGQLEYSIVQQVPRGNHFSIDASTGVIYTNQEVDREFSNLFELTVKA 1966
Query: 61 TDR 63
TD+
Sbjct: 1967 TDQ 1969
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y + + T F++ +G+I LD E +++Y+ V A D
Sbjct: 1180 VSATDPDLGRNGTVKYMI--TAGDTVKFHINGNTGKIGTLVPLDREEKTTYQLQVAAADG 1237
Query: 64 G 64
G
Sbjct: 1238 G 1238
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V++SD D G N +++ + G F + +G+I + LD E R++Y+ VVA
Sbjct: 2851 VLLVNSSDADVGNNGVISLSGGHG-----QFSINPATGQIITSSLLDREERANYQLLVVA 2905
Query: 61 TDRGK 65
TD G+
Sbjct: 2906 TDGGQ 2910
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N + Y + + ++ N F + +GEI + LD E + Y V A
Sbjct: 3155 VLIVSALDLDSGPNGQLEYAIVDG-NKDNSFSINRATGEIRTTRPLDREKVAQYGLKVKA 3213
Query: 61 TDRG 64
TDRG
Sbjct: 3214 TDRG 3217
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I + + LD+E++S Y V A
Sbjct: 1805 VTATDADSGQNADITYSITAT---NNHGTFSISPSTGSIFLVKKLDYETQSVYRLNVSAK 1861
Query: 62 DRGK 65
D G+
Sbjct: 1862 DNGR 1865
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V A DPD G N V Y L E S T F M SG+I +A L SR Y V A
Sbjct: 2015 LTTVVAYDPDEGANGEVEYELVEGDSGT--FIMDRYSGDIRLASQL-VPSRLLYTLTVSA 2071
Query: 61 TDRGKE 66
TD G E
Sbjct: 2072 TDHGME 2077
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N +V Y+L ++P H + K G I + L+ + SSYE V+A
Sbjct: 1380 IFQAKASDPDEGTNGVVVYSLKQNPRGLFHIHEK--HGLITLTGPLEVTT-SSYEVEVLA 1436
Query: 61 TDRG 64
D G
Sbjct: 1437 EDLG 1440
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA D D +N ++ Y + R F + S SG + +AQ LDFE + + V ATD
Sbjct: 3579 LSARDKDREMNGVITYNITSGNDR-GLFSINSRSGVLALAQPLDFEEKQQHNLRVSATDG 3637
Query: 64 G 64
G
Sbjct: 3638 G 3638
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A+D D G NA+V YT+ + F + SG++ + LD E RS Y +V
Sbjct: 2227 IMQLTATDADEGPNALVTYTIISGAD--DSFRIDPESGDLIATKKLDRERRSKYSL-LVR 2283
Query: 61 TDRGKET 67
D GK++
Sbjct: 2284 ADDGKQS 2290
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 11/71 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSS------- 53
+ +V+A+DPD GVN + Y + S++ +F M + +G+I + Q L +++ +
Sbjct: 3359 VTQVTATDPDKGVNGKIFYFIR---SQSEYFRMNASTGQIFVKQPLKYQNSTGAGSLNIN 3415
Query: 54 -YEFPVVATDR 63
+ F V A+DR
Sbjct: 3416 RHSFIVTASDR 3426
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D G+N V Y+L E F + V+G + + LD+E + Y A D
Sbjct: 2331 ILASDSDSGINGEVTYSL-EEDDEDETFLLNPVTGVFNVTRPLDYEVQQFYILTAKARDG 2389
Query: 64 GKE 66
G +
Sbjct: 2390 GGQ 2392
>gi|397517996|ref|XP_003829186.1| PREDICTED: protocadherin beta-15 [Pan paniscus]
Length = 787
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S N F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSEEINKPFELSSLSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFH 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|82659759|gb|ABB88946.1| Fat4 [Mus musculus]
Length = 4981
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL +PS N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTL-LNPS-GNKFSIGTIDGEVHLTGELDREEVSNYSLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVNA ++YT+ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGVNADLHYTITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
TDRG
Sbjct: 326 TDRG 329
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ S+Y + A
Sbjct: 1229 VLRVSASDVDEGSNGLIHYSILKG-NEERQFAIDSFSGQVTLVGKLDYEATSAYSLLIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G N V Y + + F + SV+G I +A+ LD E+ +Y V A
Sbjct: 2173 IIQVSAADNDEGTNGQVRYGIVGGNTH-QEFRIDSVTGAITVAKSLDRETTPAYTLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ VVATD
Sbjct: 711 VSATDPDMGPNGTVKYSI--SAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + A LD E ++ Y ++A
Sbjct: 602 LLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N ++Y + ++ + F + +GEI + LD E S YE V +
Sbjct: 2689 ILTVSATDKDSGPNGQLDYEIVNG-NQESSFTINHATGEIRSIRPLDREKISHYELTVKS 2747
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2748 SDKGSPSQ 2755
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN V Y+L ++P N F + +G I + LD + SY+ +VA
Sbjct: 912 IFQAKAVDPDEGVNGRVLYSLKQNPK--NLFTINEQNGNISLLGALDVHA-GSYQVEIVA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N +++Y + S + F + S +G + +A+ LD+E S +E + ATD
Sbjct: 3113 VSARDRDTAMNGLISYNI-ISGNEEGIFAINSSTGVVTLAKALDYEMSSKHEMTISATDG 3171
Query: 64 G 64
G
Sbjct: 3172 G 3172
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY-------- 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2895 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2951
Query: 55 EFPVVATDRGK 65
F V A+DRG
Sbjct: 2952 SFIVTASDRGN 2962
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L ++ ++ + SGE+ + Q LD E+R + V A
Sbjct: 2279 ILQVVARDDDQGPNSQLSYVL--LGGNEDNAFVLTASGELRVTQSLDREARDHFVLVVTA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 ADAG 2340
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + G I LDFE++ SY V A
Sbjct: 3215 VIHLNATDADSGANAVIAYTVQSSDS--DLFVIDPNMGVITTQGFLDFETKQSYHLTVKA 3272
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V Y L + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYALISGAD--DSFRIDPESGDLIATKRLDREHRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
>gi|153792706|ref|NP_899044.3| protocadherin Fat 4 precursor [Mus musculus]
gi|341940688|sp|Q2PZL6.2|FAT4_MOUSE RecName: Full=Protocadherin Fat 4; AltName: Full=FAT tumor suppressor
homolog 4; AltName: Full=Fat-like cadherin protein FAT-J;
Flags: Precursor
Length = 4981
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL +PS N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTL-LNPS-GNKFSIGTIDGEVHLTGELDREEVSNYSLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVNA ++YT+ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGVNADLHYTITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
TDRG
Sbjct: 326 TDRG 329
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ S+Y + A
Sbjct: 1229 VLRVSASDVDEGSNGLIHYSILKG-NEERQFAIDSFSGQVTLVGKLDYEATSAYSLLIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G N V Y + + F + SV+G I +A+ LD E+ +Y V A
Sbjct: 2173 IIQVSAADNDEGTNGQVRYGIVGGNTH-QEFRIDSVTGAITVAKSLDRETTPAYTLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ VVATD
Sbjct: 711 VSATDPDMGPNGTVKYSI--SAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I + ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + A LD E ++ Y ++A
Sbjct: 602 LLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N ++Y + ++ + F + +GEI + LD E S YE V +
Sbjct: 2689 ILTVSATDKDSGPNGQLDYEIVNG-NQESSFTINHATGEIRSIRPLDREKISHYELTVKS 2747
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2748 SDKGSPSQ 2755
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN V Y+L ++P N F + +G I + LD + SY+ +VA
Sbjct: 912 IFQAKAVDPDEGVNGRVLYSLKQNPK--NLFTINEQNGNISLLGALDVHA-GSYQVEIVA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N +++Y + S + F + S +G + +A+ LD+E S +E + ATD
Sbjct: 3113 VSARDRDTAMNGLISYNI-ISGNEEGIFAINSSTGVVTLAKALDYEMSSKHEMTISATDG 3171
Query: 64 G 64
G
Sbjct: 3172 G 3172
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY-------- 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2895 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2951
Query: 55 EFPVVATDRGK 65
F V A+DRG
Sbjct: 2952 SFIVTASDRGN 2962
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L ++ ++ + SGE+ + Q LD E+R + V A
Sbjct: 2279 ILQVVARDDDQGPNSQLSYVL--LGGNEDNAFVLTASGELRVTQSLDREARDHFVLVVTA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 ADAG 2340
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + G I LDFE++ SY V A
Sbjct: 3215 VIHLNATDADSGANAVIAYTVQSSDS--DLFVIDPNMGVITTQGFLDFETKQSYHLTVKA 3272
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V Y L + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYALISGAD--DSFRIDPESGDLIATKRLDREHRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
>gi|156397095|ref|XP_001637727.1| predicted protein [Nematostella vectensis]
gi|156224842|gb|EDO45664.1| predicted protein [Nematostella vectensis]
Length = 550
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A D D G N + + L ESP R F M +GEI LD+E +S Y VVA
Sbjct: 259 LLRVTAIDQDIGKNGEIMFYLDESPER-GLFRMDEYTGEIWTNAVLDYEVKSEYRLTVVA 317
Query: 61 TDRGKET 67
D+G ++
Sbjct: 318 QDQGPDS 324
>gi|449691444|ref|XP_004212674.1| PREDICTED: protocadherin Fat 4-like, partial [Hydra magnipapillata]
Length = 3578
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D GVN ++ Y+L + S N FY+ +G + +++ LDFESR SY + A
Sbjct: 186 VLQVHATDKDIGVNGLMTYSL--NVSGVNPFYIDPNTGVVMLSKPLDFESRKSYNITLYA 243
Query: 61 TD 62
TD
Sbjct: 244 TD 245
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D N +VNY + S + +HF + + +G I L+F+ + Y + A
Sbjct: 822 ILAVSAKDSDTFSNGVVNYAI-VSGNEDSHFQIDTTTGIISSYDYLNFDKQQYYVLEIKA 880
Query: 61 TDRGKE 66
TDRG +
Sbjct: 881 TDRGTQ 886
>gi|109506501|ref|XP_001056235.1| PREDICTED: protocadherin beta-15 [Rattus norvegicus]
gi|109507211|ref|XP_001065549.1| PREDICTED: protocadherin beta-15 [Rattus norvegicus]
gi|149017309|gb|EDL76360.1| rCG49585 [Rattus norvegicus]
Length = 795
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+VSA D D G N V+Y+L S + + F + ++SGE+ + + LDFE+ SSYE + A+
Sbjct: 261 KVSAKDSDIGTNGEVSYSLFHSSQKMSKTFELNALSGEVRLIKTLDFETTSSYEVDIEAS 320
Query: 62 DRG 64
D G
Sbjct: 321 DGG 323
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P + S+ +G++ + +D+E+ ++EF
Sbjct: 471 ISATDSDSGSNAHITYSL--LPPHDPQLALTSLISINTDNGQLFALRAMDYEALQAFEFH 528
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 529 VGATDRG 535
>gi|449267275|gb|EMC78241.1| Protocadherin Fat 4, partial [Columba livia]
Length = 3610
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSASD D G NA + Y+ G+ P++ F + + SG I + + LDFE S+ V
Sbjct: 1902 VLNVSASDADAGTNARITYSFGKMPAKVLQKFMVDAESGMIMLQEALDFEDTRSFSLAVE 1961
Query: 60 ATDRG 64
A D G
Sbjct: 1962 AKDGG 1966
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSASD D G NA + Y G+ P++ F + SG I + + LDFE S Y V
Sbjct: 1152 VLNVSASDADSGTNARITYVFGQMPAKVLKKFVVDVESGMIILKETLDFEDTSGYTLLVE 1211
Query: 60 ATDRG 64
A D G
Sbjct: 1212 ARDGG 1216
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+A+DPD G+N V Y+L ++ ++ F++ +G I + + LDFE SYE V
Sbjct: 515 LVIVTATDPDEGLNGYVKYSLKKAMDLSSEIFHLDVETGAITLVRSLDFEEGDSYEMDVQ 574
Query: 60 ATDRG 64
A D G
Sbjct: 575 ARDGG 579
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V A+DPD G+N V Y+L + + + F + S +G I + + LDFE +YE V
Sbjct: 834 LVTVIATDPDAGLNGHVKYSLKKITEIASQIFQLDSETGAITLVRSLDFEEGDTYEVEVQ 893
Query: 60 ATDRGK 65
A D G+
Sbjct: 894 ARDGGE 899
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+A+D D GVN V Y+L + + + F + + G I + + LDFE SYE V
Sbjct: 1693 LVTVTATDADDGVNGHVKYSLKKITEKASQIFQLDAEKGAITLVRSLDFEEGDSYELEVQ 1752
Query: 60 ATDRG 64
A D G
Sbjct: 1753 ARDGG 1757
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFE 49
+L VSASD D G NA + Y+ GE+P++ F + G I + + LDFE
Sbjct: 3206 VLNVSASDADAGTNARITYSFGETPAKVLQKFAVDPEGGMITLQEALDFE 3255
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 12/77 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----SPSRTNHFYMKSVSG-------EICIAQDLDF 48
+LRV A D D G NA V Y LGE +P HF + +G E+ +A+ LD
Sbjct: 397 VLRVRAWDADWGQNARVRYWLGEGRVRGAPLGDEHFSLAVQTGPGGDQRPELVLAKALDR 456
Query: 49 ESRSSYEFPVVATDRGK 65
E + +E + ATD G+
Sbjct: 457 EEAAFHELMLRATDGGE 473
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V+A+D D G+N + Y+L ++ + F++ +G I + + LDFE +YE V A D
Sbjct: 2342 VTATDADEGLNGCIKYSLKKATDLASEIFHLDVETGAIALVRSLDFEEGDTYEMDVQARD 2401
Query: 63 RG 64
G
Sbjct: 2402 SG 2403
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
MLRV A DPD G N V+Y L G S + +++ SG + + D+E + V
Sbjct: 2112 MLRVLARDPDAGSNGRVSYWLSGGSADAAAYVSVEARSGALYAQRSFDYEQCREFAVVVR 2171
Query: 60 ATDRGK 65
A D G+
Sbjct: 2172 AQDGGE 2177
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
R+SA D D G N + Y+ +P++ F + S +GE+ + LD+E YE + A
Sbjct: 3319 RISAYDLDDGPNGDIVYSFSSHTPAKVRELFALDSATGELRVKGQLDYEETKLYEIYLQA 3378
Query: 61 TDRG 64
D+G
Sbjct: 3379 KDKG 3382
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+A+D D G N + Y+L ++ + F + + +G I + + LD+E SYE V
Sbjct: 187 LVTVTATDADEGPNGHLKYSLKKATDMALDIFRLDAETGAITLVRSLDYEKDDSYEMEVQ 246
Query: 60 ATDRG 64
D G
Sbjct: 247 THDGG 251
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD G+N++ NY L S HF M +G E+ +A+ LD E + +E +
Sbjct: 83 AHDPDSGLNSVQNYEL----SGDEHFSMAVQTGPGGDQRPELVLAKALDREEAAFHELVL 138
Query: 59 VATDRGK 65
A+D G+
Sbjct: 139 RASDGGE 145
>gi|262263277|tpg|DAA06579.1| TPA_inf: protocadherin beta 2 [Anolis carolinensis]
Length = 809
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV A D D G NA++ Y+ P + F++ VSGEI + ++D+E +SY + AT
Sbjct: 259 RVEAKDLDFGSNALITYSFHRVPEKIYKLFHLNEVSGEITVLGEIDYEKETSYAMNIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|405977655|gb|EKC42094.1| Protein dachsous [Crassostrea gigas]
Length = 2755
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCG--VNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
VSA+DPDC +V Y L S + + F + SG+IC+++ LDFE++ S+EF V A
Sbjct: 42 EVSANDPDCQGRTQNLVRYHLDNS-TASRPFTVDPTSGQICVSKALDFETKQSHEFTVFA 100
Query: 61 TDRG 64
D G
Sbjct: 101 RDAG 104
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASD D G NA + Y+LG F + S SG I D+E ++SY F VVA
Sbjct: 1306 VLQVSASDIDEGENAHITYSLGNDTDGL--FQVDSQSGNITTNGLFDYEKKTSYVFFVVA 1363
Query: 61 TDRGKE 66
D G++
Sbjct: 1364 KDGGQK 1369
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
A+DPD G N ++ Y++ S T F + S SGEI + + LD+E Y+ + A D+G
Sbjct: 360 ATDPDSGSNGVILYSMAGDSSNT--FKLNSTSGEITLLRSLDYEQVQLYKLYIEARDQGN 417
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+ +A+D D G NA + Y E P H + S +G I LD E ++ Y VVA+D
Sbjct: 563 QTTATDKDTGENAYLRYQF-EQPEP--HLKIDSDTGVITTTVSLDREEKNFYNLTVVASD 619
Query: 63 RG 64
G
Sbjct: 620 HG 621
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D GVN ++Y L + F + S +G++ LD E+++SY
Sbjct: 1098 VLQVQATDLDIGVNGKLSYYLPPGVGG-DKFVLDSTTGQLSTTASLDREAQASYTLTAYV 1156
Query: 61 TDRG 64
D G
Sbjct: 1157 RDFG 1160
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 5 SASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+A+D D GVN V Y++ ++P R F + +SG++ +A LD+E + A D+
Sbjct: 883 TATDKDSGVNGSVRYSIQSQTPDRA-LFTIDPISGDLKVASVLDYEEVKQVSLVIQAKDQ 941
>gi|327270451|ref|XP_003220003.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
Length = 809
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+ RV A D D G NA++ Y+ P + F++ VSGEI + ++D+E +SY +
Sbjct: 257 ITRVEAKDLDFGSNALITYSFHRVPEKIYKLFHLNEVSGEITVLGEIDYEKETSYAMNIK 316
Query: 60 ATDRG 64
ATD G
Sbjct: 317 ATDGG 321
>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
vitripennis]
Length = 4967
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV SD D G+N V Y+L E+ F + +G+I +A++LD E+R +Y VVA
Sbjct: 1201 LLRVYTSDADEGLNGDVFYSL-ENEQHDGQFTIDEATGQISLARELDRETRDNYHLTVVA 1259
Query: 61 TDRGKETQ 68
D G E++
Sbjct: 1260 HDAGIESR 1267
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+++SD D G NA V+Y+ +PS N F + +SG + +A LD E + Y V
Sbjct: 2805 VIRITSSDQDIGANANVSYSFTGNPS--NKFAIDPLSGNVTVAGHLDREVQDEYLLKVTV 2862
Query: 61 TD--RGKET 67
D G ET
Sbjct: 2863 GDGAWGAET 2871
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++SA D D G N V Y L T F + SGEI LD E SSYE V A D
Sbjct: 2704 KISAKDADSGSNGEVTYHLMNDFDET--FVIDEESGEISTNAKLDREEISSYELIVEARD 2761
Query: 63 RG 64
RG
Sbjct: 2762 RG 2763
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A D D G N MV Y + R + F + ++G + I LD+++ Y + A
Sbjct: 3124 ILTVNAVDSDDGPNGMVRYEISAGNER-HEFSIHPITGAVTILDALDYDTVQEYRLNITA 3182
Query: 61 TDRGKETQ 68
D G E++
Sbjct: 3183 RDLGFESK 3190
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 6 ASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
ASD D G+NA + Y+ LG+ R F++ S +GEI + LD E + Y +VA D
Sbjct: 2393 ASDKDEGLNARIRYSLLGDKAER---FHVNSSTGEIVTLERLDREQTAVYHLTLVAQD 2447
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G+NA + Y ES + N F + +G + LD E + S E V+A D
Sbjct: 462 ISATDADSGLNARIYYDF-ESGNEQNWFAIDQDTGLVTTVATLDREIQGSVELKVLARDG 520
Query: 64 G 64
G
Sbjct: 521 G 521
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N V Y++ + F + +G I +A++L+FE ++ Y V A
Sbjct: 2172 VLQVSALDRDEGANGRVRYSIAAGDDNRD-FTISEDAGVIRVAKNLNFERKARYRLQVQA 2230
Query: 61 TD 62
D
Sbjct: 2231 ED 2232
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR A+D D G N+ + + + +R + F++ +G + + + LD+E Y V
Sbjct: 1307 LLRFRATDSDLGANSELTFAISAG-NRRDAFHVDPATGALYLRKPLDYEDIEVYHLNVTC 1365
Query: 61 TDRG 64
+D G
Sbjct: 1366 SDAG 1369
>gi|338713196|ref|XP_001918099.2| PREDICTED: protocadherin alpha-C2-like isoform 1 [Equus caballus]
Length = 686
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D G NA ++Y+ P + F + S +GEI I ++LDFE +SY+ +
Sbjct: 261 VIRLNASDRDEGANAEISYSFHSLVPPMVIDQFSIDSNTGEITIRKNLDFEKVNSYKIRI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|156361307|ref|XP_001625459.1| predicted protein [Nematostella vectensis]
gi|156212294|gb|EDO33359.1| predicted protein [Nematostella vectensis]
Length = 814
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 MLRVSASD---PDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+LRVSA+D D GVNA + Y L ++ + F + +G+I I Q +D+E RSSY F
Sbjct: 512 ILRVSANDRDDKDEGVNAEIRYFLKDAIV-SKKFSINDTTGQITIKQAVDYEERSSYSFE 570
Query: 58 VVATDRGK 65
V A+D G+
Sbjct: 571 VFASDGGE 578
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D +NA V Y++ + +++F + +++G + +++ D+E++ Y F V A
Sbjct: 22 LLTVLARDQDAALNARVTYSIVSFSTESDYFVIDNITGVVRSSKEFDYETQRMYSFSVRA 81
Query: 61 TDRG 64
DRG
Sbjct: 82 EDRG 85
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A D D G NAM+ Y++ S + + F + + SG+I + + LD E+ +Y ++
Sbjct: 235 VLRVTAHDKDSGPNAMLKYSI-HSGNTDDAFVIIADSGDISLDKPLDKETIENYTLVLIV 293
Query: 61 TDRG 64
TD G
Sbjct: 294 TDMG 297
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
++RV A + D V A Y + ++ S + ++ + +G+I +A++LD+E+R YEF
Sbjct: 342 IVRVRAVEDDVSVGARFIYVIKDAAS--SKVFLVNQTGDITLARELDYETRRRYEF 395
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D +N V +++ E S F + +G + + LD+E + Y + A
Sbjct: 727 ILRVTASDLDSSLNGKVLFSILEGNSD-GKFVVDQNTGVVTTNKSLDYEDVTEYTLVIQA 785
Query: 61 TDRG 64
TD G
Sbjct: 786 TDCG 789
>gi|157128514|ref|XP_001661464.1| cadherin [Aedes aegypti]
gi|108872553|gb|EAT36778.1| AAEL011164-PA, partial [Aedes aegypti]
Length = 2413
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N +V Y L +S + + +F+M G I + + LD E+ S + F V+
Sbjct: 68 ILKVQAKDNDTGINQVVTYALQTDSKNTSEYFHMDPTDGVIYLKKSLDHETLSHHHFTVI 127
Query: 60 ATDRG 64
A+D+G
Sbjct: 128 ASDKG 132
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A+D D G+N + Y+ +S +HF + SG + +A+ LD E ++ Y V ATD
Sbjct: 902 KIHATDADIGINRKIKYSFIDS--YRDHFKIAPDSGIVTLAKPLDREVKAVYNLTVRATD 959
Query: 63 RGK 65
+GK
Sbjct: 960 QGK 962
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++++A D D G N + Y+L E N F + + +G I LD E R Y+F V+
Sbjct: 588 IMKLTARDSDSGSNGDIRYSLSTEVGDIVNIFDIDAYTGWITTLVPLDKEKREDYKFQVI 647
Query: 60 ATDRGK 65
ATD G+
Sbjct: 648 ATDNGQ 653
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
ML++ A+D D G N+ V+Y + E R F ++ +G I +A LD ES SSY V A
Sbjct: 1109 MLQIRANDMDSGENSRVSYRI-ERGDRMGQFDIEEDTGYISVAGTLDRESISSYVLEVQA 1167
Query: 61 TDRG 64
D G
Sbjct: 1168 RDHG 1171
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+ D G+NA + Y+ +G + R F M + +G + +A +D+E Y +
Sbjct: 1004 VLRVLATSKDTGINAEITYSIIGGNEHR--KFAMHNKTGVLYLADVVDYERAKDYFLTIQ 1061
Query: 60 ATDRG 64
A D G
Sbjct: 1062 AVDGG 1066
>gi|444525567|gb|ELV14093.1| Protocadherin gamma-B7 [Tupaia chinensis]
Length = 810
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRVSA+D D G+NA + Y+ + + H F + S +G I Q LDFE Y V
Sbjct: 263 VLRVSATDQDEGINAEITYSFLGAADKAQHVFSLDSTTGNIITRQPLDFEEVERYTMNVE 322
Query: 60 ATDRG 64
A DRG
Sbjct: 323 AKDRG 327
>gi|426231039|ref|XP_004009556.1| PREDICTED: protocadherin beta-8 [Ovis aries]
Length = 771
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L + S + F + +++GEI + + LDFE+ SYE +
Sbjct: 261 VVKVSATDVDIGVNGEISYSLSQASEDVSKTFEINAMTGEIRLKKQLDFETTQSYEVSIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDPG 325
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L PS + + S+ +G + LD+E+ ++EF
Sbjct: 473 VSATDTDAGANAQVTYSL--LPSSDSPVPLASLVSINPDNGHLFALTSLDYEALRAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|326673644|ref|XP_002664482.2| PREDICTED: protocadherin-11 X-linked [Danio rerio]
Length = 1098
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D G NA++ Y+LG P + F + S SG + + + LD E + Y F V+A
Sbjct: 485 LIKISATDADSGSNALIIYSLG--PDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIA 542
Query: 61 TDRG 64
D G
Sbjct: 543 RDNG 546
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ A+D D G NA ++++ SPS HF + S +G I + Q LD E ++ V+A
Sbjct: 270 HLHATDADLGSNAQIHFSFSNQISPSTKRHFAIDSTTGLITVKQPLDREVNPVHKLIVLA 329
Query: 61 TD 62
+D
Sbjct: 330 SD 331
>gi|307190373|gb|EFN74432.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 1810
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV +D D G+N V Y+L E ++ HF + +G+I + ++LD E+ +Y VVA
Sbjct: 1277 LLRVYTTDADKGLNGDVFYSL-EDGNQHGHFIIDEATGQISLVKELDRETSDTYVLTVVA 1335
Query: 61 TDRGKETQ 68
D G ET+
Sbjct: 1336 HDAGLETR 1343
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A DPD G N +V+Y+ L + P + HF + S +G I +D E +++ V
Sbjct: 1488 IVTITAEDPDSGDNGIVSYSILNQDPEDQVRHFGINSSNGIIHTLLPIDREEVDTFKLIV 1547
Query: 59 VATDRGK 65
VATDR +
Sbjct: 1548 VATDRAQ 1554
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G+NA V Y L ES + F + +G + LD E + S E V A D
Sbjct: 537 ISATDADSGLNAQVYYNL-ESGNNLGWFAIDKNTGLVTTVATLDREVQGSIELLVYAQDG 595
Query: 64 GKETQ 68
G T+
Sbjct: 596 GPNTK 600
>gi|363745246|ref|XP_003643236.1| PREDICTED: protocadherin beta-15-like, partial [Gallus gallus]
Length = 352
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++RVSA+DPD G N V Y E R++ F + S +GEI + +LDFE ++ V
Sbjct: 153 VVRVSAADPDEGSNGKVRYEFTEMSERSSQVFQLNSETGEIRVWGNLDFEEADDHDIEVK 212
Query: 60 ATDRG 64
ATD G
Sbjct: 213 ATDGG 217
>gi|307210681|gb|EFN87104.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Harpegnathos saltator]
Length = 3435
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRVS+ D D G+N V Y + ++ + T+ F++ G I + + LD E+R S+ F V+
Sbjct: 1043 VLRVSSRDNDTGINQKVRYAIQNDTENSTDLFHIDPDEGVIFLKRSLDHETRESHHFTVI 1102
Query: 60 ATDRG 64
A DRG
Sbjct: 1103 AMDRG 1107
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G N V Y+ G N F + + +G I LD E + Y+F VV
Sbjct: 1562 ILKVIAHDKDLGSNGEVRYSFGSDIGELANVFTVDAYTGWISTLVQLDKEKQPEYKFQVV 1621
Query: 60 ATDRG 64
ATD G
Sbjct: 1622 ATDNG 1626
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+D D G+N + Y +S HF++ + SG + + + LD E+++ Y + A D
Sbjct: 1876 KVHATDDDIGINRKIRYEFIDSAD--GHFFIAADSGIVTLGKPLDRETKAMYNVTIQALD 1933
Query: 63 RG 64
+G
Sbjct: 1934 QG 1935
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A D D +NA++NY + E R +F++ S +G I LD E+ + F V +
Sbjct: 529 LVIKAEDADSELNALLNYDIVEDLPR-KYFHIDSSTGAIRTVMVLDHETIPMFSFHVKVS 587
Query: 62 DRGK 65
D GK
Sbjct: 588 DLGK 591
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A D D G V Y + S + F + ++GEI + LD E YE PV+ATD
Sbjct: 1254 VLAVDEDFGEYGTVMYAI-MSETMKEIFDINKLTGEIVTRKKLDREQLKRYEIPVIATDG 1312
Query: 64 G 64
G
Sbjct: 1313 G 1313
>gi|307194559|gb|EFN76851.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 1801
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV +D D G+N V Y+L E+ ++ HF + +G+I + ++LD E+ SY VVA
Sbjct: 1261 LLRVYTTDADEGLNGDVFYSL-ENGNQHGHFMIDEATGQISLVKELDRETFDSYVLTVVA 1319
Query: 61 TDRGKETQ 68
D G ET+
Sbjct: 1320 HDAGLETR 1327
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR A+D D G+N+ +++ + +R + FY+ +SG + + + LD+E Y V
Sbjct: 1367 LLRFKATDNDLGLNSELSFAISAG-NRKDTFYIDPLSGTLYLRKPLDYEELMRYTLNVTC 1425
Query: 61 TDRG 64
+D G
Sbjct: 1426 SDGG 1429
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A D D G N + Y+ S +R N F + ++G++ DLD E+ + Y V+A
Sbjct: 626 VTAVDNDQGTNGSIAYSFHPSVARDYPNTFALDVLTGQLTTKTDLDRETIAEYRILVIAR 685
Query: 62 DRGKETQ 68
D+G Q
Sbjct: 686 DQGIPVQ 692
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A DPD G N +V+Y+ L + P F + +G I Q +D E +++ V
Sbjct: 1472 IVTITAEDPDSGENGVVSYSILSQDPEDEVRRFGINPSTGVIHTLQPIDREEVDAFKLMV 1531
Query: 59 VATDRGK 65
VATD+ +
Sbjct: 1532 VATDQAE 1538
>gi|348514393|ref|XP_003444725.1| PREDICTED: protocadherin Fat 4-like [Oreochromis niloticus]
Length = 1009
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ A+D D G N + Y+LG PS + FY+ +V+G+I + Q LD E ++SY +
Sbjct: 789 VITTKATDIDEGPNGDIEYSLGIHTPPSVVSLFYIDTVTGDIYLKQQLDHEIQTSYRIDI 848
Query: 59 VATDRG 64
ATD+G
Sbjct: 849 SATDKG 854
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++ A+D D G N + Y+ G S + + F + +SG I + LDFE+ ++YE +
Sbjct: 268 IVQTKATDMDDGQNGEIEYSFGAHTSDAMMSTFIIDHISGTIFLKGKLDFEANANYELDI 327
Query: 59 VATDRG 64
A D+G
Sbjct: 328 SAKDKG 333
>gi|81158095|ref|NP_001032231.1| protocadherin gamma-A3 precursor [Rattus norvegicus]
gi|50512402|gb|AAT77596.1| protocadherin gamma a3 [Rattus norvegicus]
Length = 929
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+ V+A+DPD G NA V+Y L + P + F++ SV+G++ I + LD+E YE +
Sbjct: 258 LTTVNATDPDEGFNAQVSYILDKMPGKIAQIFHLNSVTGDVSILKSLDYEDAVFYEIKIE 317
Query: 60 ATD 62
A D
Sbjct: 318 AQD 320
>gi|444525566|gb|ELV14092.1| Protocadherin gamma-A11 [Tupaia chinensis]
Length = 790
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+DPD G+N V Y+ S+T+ F + S +GE+ + + LDFE YE +
Sbjct: 261 VLRVNATDPDEGINGEVMYSFRNMKSKTSEIFQLNSKTGEVLVKRSLDFEKYRFYEMEIQ 320
Query: 60 ATDRG 64
D G
Sbjct: 321 GQDGG 325
>gi|390337821|ref|XP_785601.3| PREDICTED: protocadherin Fat 4 [Strongylocentrotus purpuratus]
Length = 5000
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
L+V+ASDPD G+N+++ Y++ S F + V+G + + L++E RSSY V A
Sbjct: 2205 FLKVTASDPDEGLNSIIRYSIFSGDSG-RAFAIDPVTGVLSVNSGLNYEQRSSYTLTVRA 2263
Query: 61 TDRGKETQ 68
D+G TQ
Sbjct: 2264 QDQGYSTQ 2271
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V A+DPD G+N V Y++ E +P + FY+ +G + Q LD+E + Y V+AT
Sbjct: 1892 VVATDPDAGLNGEVAYSVVEEGAPGE-DVFYLDPATGAFRLQQSLDYEVKQHYFMTVMAT 1950
Query: 62 DRG 64
D+G
Sbjct: 1951 DKG 1953
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D GVN M+N+ L F + S SG I + + LD+E ++ +E V+A
Sbjct: 2309 IVQVRADDADSGVNGMINFRL--ESDYNGLFTIGSTSGLIQVTEVLDYEDQNEFELIVIA 2366
Query: 61 TDRG 64
D G
Sbjct: 2367 EDSG 2370
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
VSA+D D GVN V ++L +S + F + S SG + + LD E SSY V A D
Sbjct: 733 VSATDLDVGVNGAVIFSLSDS----SKFQIDSYSGNVTTRESLDREQESSYTLTVTAQD 787
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D GVN V YT S + F + SG + I LD E + SYE ++A
Sbjct: 625 LIQVLATDLDNGVNGDVTYTF-SSDQYSGMFSLDPESGLLQITVPLDREEQDSYELEILA 683
Query: 61 TDRG 64
+D G
Sbjct: 684 SDGG 687
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 1 MLRVSASDPDCGVNAMVNY--TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ VSA+D D N V+Y TLG TN+ + S SG I Q LD E+ +SY V
Sbjct: 2714 VVSVSATDEDSLSNGDVSYAITLG----NTNNAFDISSSGVITTTQPLDRETVASYILTV 2769
Query: 59 VATDRGKETQ 68
ATD G +Q
Sbjct: 2770 EATDGGNPSQ 2779
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RVSA+D D G N+ + Y++ S + F++ V G+I + LD E Y V A
Sbjct: 1251 IIRVSATDDDVGDNSYILYSI-VSGNEEKRFHIDHVHGQIVLIAPLDREVTEGYVLRVKA 1309
Query: 61 TDRG 64
D G
Sbjct: 1310 RDGG 1313
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A D D G+N + Y++ S + F + +VSG + + LD E+ ++ V A DR
Sbjct: 3140 VRAEDDDSGINGEITYSI--SGADAALFSIDAVSGIVSLVGSLDRETSDEHQIQVTAEDR 3197
Query: 64 GKETQ 68
+Q
Sbjct: 3198 AMYSQ 3202
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD GVN V YTL S F + ++GE+ + Q + S + Y + A D
Sbjct: 1576 VHADDPDTGVNGQVTYTL---ISTGVPFRLDLITGELTLTQPIP-SSANIYSLDIRADDA 1631
Query: 64 GKETQ 68
G Q
Sbjct: 1632 GSNPQ 1636
>gi|350535419|ref|NP_001231966.1| protocadherin gamma subfamily A, 2 precursor [Gallus gallus]
gi|37222396|gb|AAQ89958.1| gammaA-like protocadherin precursor [Gallus gallus]
Length = 811
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+DPD G N V Y E + +N F+++ +G I + ++LDFE YEF V
Sbjct: 262 LLRVTATDPDDGTNGDVKYLFQEVLEQISNTFHIEPKTGAIRLVRNLDFEEADFYEFLVQ 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 AHDGG 326
>gi|148703183|gb|EDL35130.1| mCG142341 [Mus musculus]
Length = 2317
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL +PS N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 20 VFKAQATDPDSGPNSYIEYTL-LNPSG-NKFSIGTIDGEVHLTGELDREEVSNYSLTVVA 77
Query: 61 TDRGK 65
TD+G+
Sbjct: 78 TDKGQ 82
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G N V Y + + F + SV+G I +A+ LD E+ +Y V A
Sbjct: 124 IIQVSAADNDEGTNGQVRYGIVGGNTH-QEFRIDSVTGAITVAKSLDRETTPAYTLTVQA 182
Query: 61 TDRG 64
TDRG
Sbjct: 183 TDRG 186
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N ++Y + ++ + F + +GEI + LD E S YE V +
Sbjct: 592 ILTVSATDKDSGPNGQLDYEIVNG-NQESSFTINHATGEIRSIRPLDREKISHYELTVKS 650
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 651 SDKGSPSQ 658
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N +++Y + S + F + S +G + +A+ LD+E S +E + ATD
Sbjct: 1016 VSARDRDTAMNGLISYNI-TSGNEEGIFAINSSTGVVTLAKALDYEMSSKHEMTISATDG 1074
Query: 64 G 64
G
Sbjct: 1075 G 1075
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY------ 54
+ +VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 796 VTQVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNIN 852
Query: 55 --EFPVVATDRGK 65
F V A+DRG
Sbjct: 853 RHSFIVTASDRGN 865
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + G I LDFE++ SY V A
Sbjct: 1118 VIHLNATDADSGANAVIAYTVQSSDS--DLFVIDPNMGVITTQGFLDFETKQSYHLTVKA 1175
>gi|47212432|emb|CAF94182.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3085
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-----ESPSRT--NHFYMKSVSGEICIAQDLDFESRSS 53
+L+V A D D G N V Y+LG ES T N F + S SG I +LD E+ SS
Sbjct: 2883 ILQVRALDADSGANGQVRYSLGGLIQSESQQETLFNTFSIDSQSGWISTLTNLDHETSSS 2942
Query: 54 YEFPVVATDRGKET 67
Y F VVA+D G+ T
Sbjct: 2943 YVFTVVASDFGEIT 2956
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L VSA+D D N +++Y + + T++F++ S SG I A+ LD E ++F V+AT
Sbjct: 2353 LHVSATDKDSDKNNVIHYQIFSDHNNTDYFHIDSSSGLILTARMLDHELVQKFDFVVIAT 2412
Query: 62 DRG 64
D G
Sbjct: 2413 DNG 2415
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA D D G NA V Y++ ES ++ N F+++ + G I I+ DL+ S Y V A
Sbjct: 1631 VVQVSALDKDKGENADVQYSI-ESGNKGNTFHIEPILGIITISHDLNLSSIGHYVLTVRA 1689
Query: 61 TDRG 64
TD+G
Sbjct: 1690 TDKG 1693
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G V Y+L F + SG I + ++LD+E++ Y V A DRGK
Sbjct: 948 DPDLGPGGQVQYSLAND--YNGWFEVDRTSGAIRLMKELDYETQQFYNLSVKAKDRGK 1003
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + +G I LD E++ SY V A
Sbjct: 1048 LLQVAAQDDDVGRDGEIQYSIRDG-SGLGRFAINEETGVIYTTDTLDRETKDSYWLTVYA 1106
Query: 61 TDRG 64
TDRG
Sbjct: 1107 TDRG 1110
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y+L + T +F + S SG + +A LD E S + V A
Sbjct: 836 VIQVGATDRDAGPNGEVAYSL---LTATANFGINSTSGVVYVAGQLDRELVSVFYLKVEA 892
Query: 61 TDRGKE 66
D+ ++
Sbjct: 893 RDKAEQ 898
>gi|348565657|ref|XP_003468619.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Cavia
porcellus]
Length = 4527
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L S + F + S SG I + Q LD E +SSY V A
Sbjct: 3121 LTRVQAVDPDVGINRKVVYSLATSAN--GFFSIDSTSGIIILEQPLDREQQSSYNISVRA 3178
Query: 61 TDRGKE 66
TD+ E
Sbjct: 3179 TDQSPE 3184
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+ +V A+D D G N V Y+L P + F + S +G I +DLD E+ ++ F
Sbjct: 2804 LTQVRATDMDWGANGQVTYSLHSDSHPEKVMEAFNIDSNTGWISTLKDLDHETDPAFSFS 2863
Query: 58 VVATDRGK 65
VVA+D G+
Sbjct: 2864 VVASDLGE 2871
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V +SD D G N MV+Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 2277 VLQVVSSDIDSGNNKMVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVR 2336
Query: 60 ATDRG 64
ATD G
Sbjct: 2337 ATDNG 2341
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ SY V A
Sbjct: 1033 VLQVTAQDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVITAADILDRETTGSYWLTVYA 1091
Query: 61 TDRG 64
TDRG
Sbjct: 1092 TDRG 1095
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+G+
Sbjct: 933 DPDLGLGGQVRYSLVND--YNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGR 988
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE---SPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y++ P N F +G I ++LDFES +Y F
Sbjct: 491 ILSVSASDKDKGENGYITYSIASLNLLPFAINQF-----TGVISTTEELDFESSPETYRF 545
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 546 IVRASDWG 553
>gi|62510862|sp|Q5DRA9.1|PCDGE_PANTR RecName: Full=Protocadherin gamma-B2; Short=PCDH-gamma-B2; Flags:
Precursor
Length = 931
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D GVNA + Y+ + HF+ + +GEI DLDFE SSY +
Sbjct: 261 VLQVTATDRDEGVNAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
>gi|410949641|ref|XP_003981529.1| PREDICTED: protocadherin Fat 2 [Felis catus]
Length = 4376
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+R +Y F V
Sbjct: 2843 VIQVTANDQDTGNDGQVSYRLPADPGSNIHELFAIDSETGWITTLQELDCETRQTYRFYV 2902
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2903 VAHDHGRTIQ 2912
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D VN+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3367 VLTVSATDEDGPVNSAITYSLVGG-NQLGHFTIHPKKGELQVAKALDWEQTSSYSLRLRA 3425
Query: 61 TDRGK 65
TD G+
Sbjct: 3426 TDSGR 3430
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2316 VIQLLASDQDSGQNRDVSYQIVEDGSDISKFFQINGSTGEMSTVQELDYETQQHFHVKVR 2375
Query: 60 ATDRG 64
A DRG
Sbjct: 2376 AMDRG 2380
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 972 LDASDPDVGPAGEVRYVLLDDAHGT--FQVDPMTGALSLERELDFERRAGYNLSLWASDS 1029
Query: 64 GK 65
G+
Sbjct: 1030 GR 1031
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN V Y E + +F + G+I + + D+++ + Y V+A
Sbjct: 2114 LCQVSATDQDLGVNGAVTYAFAEDYA---YFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2170
Query: 61 TDRGKET 67
D G T
Sbjct: 2171 RDGGTPT 2177
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y +R+ F + SG + +A L+ R YE V+A D
Sbjct: 193 KVTATDADLGQNAKFYYAFN---TRSETFAIHPTSGVVTLAGKLNVTWRGRYELQVLAVD 249
Query: 63 RGKE 66
R ++
Sbjct: 250 RMRK 253
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF +++ +G I + + L + + + E V A+D
Sbjct: 3162 VLARDPDQGANAQVVYSLTDSAE--GHFSIEATTGVIRLEKPLRVKPQEALELTVRASDL 3219
Query: 64 G 64
G
Sbjct: 3220 G 3220
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V Y+ + S F + ++ G I +AQ LD + + Y V A
Sbjct: 1599 LLQVRAMDGDRGANAEVRYSFLKGNSE-GFFNINALLGIITLAQKLDQANHARYSLTVKA 1657
Query: 61 TDRG 64
D+G
Sbjct: 1658 EDQG 1661
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +GE+ LD E + +Y A
Sbjct: 3057 ILQVSATDLDSETNAQITYSL-HGPG-ADEFKLDPHTGELTTLTALDREKKDTYSLVAKA 3114
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3115 TDGGGQS 3121
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + ASD D N+++ Y + E P F + G + I ++D+ES S++F V
Sbjct: 1810 LVIRASDRDEEANSLLVYEILE-PEALKFFKIDPSMGTLIIISEMDYESMPSFQFSVYVH 1868
Query: 62 DRG 64
D+G
Sbjct: 1869 DQG 1871
>gi|321478607|gb|EFX89564.1| hypothetical protein DAPPUDRAFT_233379 [Daphnia pulex]
Length = 6466
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V A+DPD G+ +V Y+L S + F + V+G + +A+ LDFE RS Y V A
Sbjct: 1830 VEATDPDLGLGGVVRYSLASSYASEIVEQFSIDKVTGTVRLARRLDFEDRSVYNLTVRAK 1889
Query: 62 DRG 64
DRG
Sbjct: 1890 DRG 1892
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D GVN + Y+L E PS T F + ++G I + + L F + +E V+A
Sbjct: 1010 LVQVKADDADVGVNGEIYYSLAE-PSDT--FAVHPLTGVISLTRPLVFADQPFHELAVLA 1066
Query: 61 TDRGKE 66
+DRG +
Sbjct: 1067 SDRGPK 1072
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+ D GVNA + Y++ G + R HF + +SG I +A+ LD+E + V
Sbjct: 4454 ILNVLATSLDIGVNAEIKYSIVGGNEHR--HFAIDPLSGVISLAEPLDYERAREFYLTVQ 4511
Query: 60 ATDRG 64
A D G
Sbjct: 4512 ALDGG 4516
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L VSA D D GVNA+++Y + E P F + S +G + LD E + EF V +
Sbjct: 2948 LVVSARDGDSGVNALLSYDIVE-PRAAQLFAIDSNTGAVRTLAPLDREQLARVEFTVQVS 3006
Query: 62 DRGK 65
D G+
Sbjct: 3007 DHGR 3010
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPD--CGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
++RVSA D D G + Y+ G +P N F + SV+G I LD E Y
Sbjct: 4016 VIRVSAMDGDRVTGAYGDLRYSFGHNMAPELANIFRLDSVTGWITTLGLLDREQCDRYVL 4075
Query: 57 PVVATDRG 64
P++A+D G
Sbjct: 4076 PIIASDNG 4083
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR++A D D G N + YTL R F + S +G + ++ LD E +SY V A
Sbjct: 4559 VLRLNAVDLDGGDNGRITYTLLNG-DRHAQFRIDSSTGLLTVSGQLDRELITSYMLEVEA 4617
Query: 61 TDRG 64
D G
Sbjct: 4618 RDNG 4621
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A D D G N V Y+L E+ S F + SG I AQ + + F V A
Sbjct: 2420 VFRVEALDRDAGENGRVEYSLMETASTKGRFRIHPHSG-IVYAQK-SLAAGQEFSFSVRA 2477
Query: 61 TDRGK 65
+DRG+
Sbjct: 2478 SDRGR 2482
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ SD D G NA V ++ ++ HF + SG + A LD E R+ + V A
Sbjct: 1246 LIRLRVSDQDQGRNAQVQLSIVGG-NQGGHFRINPTSGVLYTALPLDAEMRAEHILTVSA 1304
Query: 61 TDRG 64
D+G
Sbjct: 1305 IDQG 1308
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSR---TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ A+D D +N + Y++ S + N F + + SG + +A+ LD E+ SY V
Sbjct: 4347 KIHATDSDLALNRKIRYSMVTSTTSLAGQNSFAIDAESGIVTVAKGLDRETVPSYNLTVS 4406
Query: 60 ATDRG 64
A D G
Sbjct: 4407 AIDLG 4411
>gi|127138947|ref|NP_001076031.1| protocadherin gamma-B2 precursor [Pan troglodytes]
Length = 931
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D GVNA + Y+ + HF+ + +GEI DLDFE SSY +
Sbjct: 261 VLQVTATDRDEGVNAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
>gi|301753565|ref|XP_002912658.1| PREDICTED: protocadherin alpha-7-like [Ailuropoda melanoleuca]
Length = 765
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+N + Y+ SP + + FY+ +VSGEI +DFE +Y+ V
Sbjct: 261 VIKLNASDLDEGLNGDITYSFSSDVSPDKKSKFYIDAVSGEIIAIGHIDFEESKTYKLRV 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 EAIDKG 326
>gi|196006169|ref|XP_002112951.1| hypothetical protein TRIADDRAFT_25152 [Trichoplax adhaerens]
gi|190584992|gb|EDV25061.1| hypothetical protein TRIADDRAFT_25152, partial [Trichoplax
adhaerens]
Length = 2391
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G N+ ++Y+ + ++ NHF + + +G I I + LD+E+RSSY V D
Sbjct: 558 QVKATDPDAGTNSQLSYSF-VNVTQNNHFDINTTTGRITIKKSLDYENRSSYTLFVKTQD 616
Query: 63 RG 64
G
Sbjct: 617 AG 618
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV ASD D G NA + Y++ PS + F + S +G+I + + LD+ESRSSY + A
Sbjct: 36 VLRVYASDRDAGNNAKILYSIISQPS-SQAFSINSTTGQIQVQRQLDYESRSSYGLTIGA 94
Query: 61 TDRG 64
+ G
Sbjct: 95 NNPG 98
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D V + + Y+ + + + F + S G I +A+ LD+E +SYE V ATD+
Sbjct: 1827 VTASDSD--VRSNITYSFKPNGNGNDTFSIDSFRGLITLARRLDYERITSYELIVQATDQ 1884
Query: 64 GKETQ 68
++ Q
Sbjct: 1885 IQKAQ 1889
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A+D D G N ++ Y++ + + F + V+G I A LD E+ +SY F V A+D
Sbjct: 1409 VYATDADSGPNQIIRYSIIGTDNVHKAFTINPVTGRIATAARLDRETIASYNFLVNASD 1467
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G N V Y + T HF M + +G I A +D E+ Y+ ATD+
Sbjct: 986 VNASDKDLGQNGKVRYGIVNVLPVTGHFIMNATTGCIYTAAAIDHENVYKYDLIASATDQ 1045
Query: 64 G 64
Sbjct: 1046 A 1046
>gi|57043487|ref|XP_544312.1| PREDICTED: protocadherin gamma-A10 [Canis lupus familiaris]
Length = 824
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+D D G N V Y+ +SP ++ F + +GEI +++DLD+E YE +
Sbjct: 261 LLRVTATDKDEGANGEVTYSFRKSPDTQLLKFQLNKNTGEIKLSEDLDYEETDFYELEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDGG 325
>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
Length = 14757
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D G N +V Y L S + F + +VSG+I A LDFE+R SY VVA
Sbjct: 4052 VLSVQAEDVDSGANGLVRYEL-SSGNVGGTFSIDAVSGDIFTALSLDFETRESYRMTVVA 4110
Query: 61 TDRG 64
D G
Sbjct: 4111 RDGG 4114
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+D D G+N +V Y + E+ F + SV+G + +AQ LD ES++ Y+ V+A D+
Sbjct: 6329 VNATDRDLGLNGVVAYMI-ETGDPDGRFLIDSVTGALTVAQTLDRESKAEYQLEVLAEDQ 6387
Query: 64 G 64
G
Sbjct: 6388 G 6388
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V ASD D G+NA+V+Y++ S F + S SGE+ + LD E SSY V A
Sbjct: 1331 VFAVVASDDDSGLNAIVSYSIVAGNSDF-AFVINSTSGELTVGNSLDREKTSSYRLTVTA 1389
Query: 61 TD 62
T+
Sbjct: 1390 TN 1391
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
+A+D D G N +V Y+ G S F + +G + +++ LDFE Y+ V+A+D G
Sbjct: 2775 TATDRDIGNNGLVTYSFG---SFLAEFNINGSTGVVVLSRSLDFEKTQRYDLDVIASDNG 2831
Query: 65 KE 66
++
Sbjct: 2832 QK 2833
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G+NA+V+Y+ + F + S +G + +A LDFE+R +Y + A
Sbjct: 1018 VVQVKATDLDTGLNALVSYSFVNG-NVGQAFGINSSNGLVTVAASLDFETRPAYSLTIEA 1076
Query: 61 TD 62
D
Sbjct: 1077 VD 1078
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
VSASD D G NA++ Y++ E+ + F + + +G++ + + LD E+RS Y + A+
Sbjct: 6115 VSASDADSGDNAVLQYSVLETVGSVGYGKFGVNASTGQVTLLEPLDRENRSQYSLKIQAS 6174
Query: 62 DRG 64
D G
Sbjct: 6175 DGG 6177
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+D D G NA V Y++ E + F + GEI + LD E+ ++Y V+ATD
Sbjct: 5104 VSATDNDAGTNAFVKYSITEG-NANGTFSVNPFLGEIETNRALDRENVAAYSLKVLATDG 5162
Query: 64 G 64
G
Sbjct: 5163 G 5163
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+D D G+N+++ Y+L ++ S F + G++ + LD E+++SY V+A D
Sbjct: 8486 VQATDADSGINSLIRYSLTDASS---TFTIDHRFGDLSTLKTLDRETQASYNLTVLAVDS 8542
Query: 64 G 64
G
Sbjct: 8543 G 8543
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
ASD D G N + Y++ S + F + + +G + +A LD+E+ YEF + A D G
Sbjct: 2879 ASDLDAGSNGELTYSI-SSGNAGGQFEIDATTGNVTVAIPLDYETTKRYEFTITAKDGG 2936
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D G N V Y+L SPS ++ F + + SG + + LD E +S Y V+A
Sbjct: 1437 VLTVKATDDDIGSNGAVTYSL--SPS-SSLFNIDNTSGVLEVTGSLDREKQSVYSLNVIA 1493
Query: 61 TDRG 64
D G
Sbjct: 1494 VDGG 1497
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A D D G N +N+ + S + F + S+SG++ I + LD E++ +Y+ V
Sbjct: 8272 LAEIKAQDRDSGKNGKLNFAI-TSGNNGGIFSLDSLSGQLSIVRSLDRETKKNYDLTVAV 8330
Query: 61 TDRG 64
+D G
Sbjct: 8331 SDSG 8334
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V A+D D G N +V+Y++ S +R F + +G+I + + LD E+ +SY ++A
Sbjct: 6220 VFTVRANDADEGTNGLVSYSI-RSGNRDGQFTVDHSNGQIAVLKPLDREAVNSYVLTILA 6278
Query: 61 TD 62
+D
Sbjct: 6279 SD 6280
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQ--DLDFESRSSYEFPV 58
+L VSA DPD V Y+LG + F + S +G I +A+ D+D E+ Y F V
Sbjct: 8992 VLTVSAFDPDSHDAGQVFYSLGTGSAV--PFTINSSTGVISVARPSDIDMETNPLYNFTV 9049
Query: 59 VATDRG 64
VA D G
Sbjct: 9050 VAIDAG 9055
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RVSASD D G + V+Y+L E + F + +VSG + LD+E + + V A
Sbjct: 4368 IVRVSASDADDGSSGRVSYSLVEG-NENGTFAVDAVSGIVTTTASLDYEMKRKFVLIVEA 4426
Query: 61 TDRG 64
D G
Sbjct: 4427 IDGG 4430
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+D D GVN + Y + + + N F++ +SG + + + +D+E R+ Y V A
Sbjct: 8166 IITVVAADNDTGVNGQLAYRI-LTGNDNNTFFLDELSGNLTLRKSVDYEMRTLYSIVVEA 8224
Query: 61 TD 62
D
Sbjct: 8225 KD 8226
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA D D G N V+Y LG + + S +G + + LD E++ SY+ V A D
Sbjct: 3748 LSAEDLDAGSNGDVHYVLGSGDE--DGVFKLSDAGSLVTVKSLDHETKISYQLTVFAVDG 3805
Query: 64 GK 65
G+
Sbjct: 3806 GR 3807
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L SASD D G+N V+Y +G ++ F + S +G + +A+DL S S F + A
Sbjct: 8792 VLTASASDRDVGINEEVSYAVGP---LSDFFEVNSTTGVLTVARDLKPLSGRSLTFELTA 8848
Query: 61 TD 62
T+
Sbjct: 8849 TN 8850
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ VSA+D D G N + Y++ + F + S + + +A+ LD E+ SSY + A+
Sbjct: 1542 VTVSATDADAGANGQLIYSI-VGGNINGAFNLDSATASLTVAKSLDRETLSSYRLTIQAS 1600
Query: 62 DRG 64
D G
Sbjct: 1601 DGG 1603
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+++ASDPD G N + ++L F + S G + A++LD+E R +Y V
Sbjct: 1124 VLQLTASDPDVGTNGQIAFSL--VSGDIGDFNL-SAGGLLKTARNLDYERRQTYHLVVQV 1180
Query: 61 TDRG 64
D G
Sbjct: 1181 EDFG 1184
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIA-QDLDFESRSSYEFPVVAT 61
RVSA+D D G N + Y+L +PS F + SG + ++ +LD E ++ Y V A
Sbjct: 2462 RVSATDKDSGSNGQILYSL--TPSGV--FQIGRSSGTLTLSVANLDRELKTRYSLTVTAR 2517
Query: 62 DRG 64
DRG
Sbjct: 2518 DRG 2520
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + + + + R + F + S SG + + DLD E Y V A D+
Sbjct: 3643 VAASDADSGSNAKLTFRIIDG-DRNDVFSIGSTSGIVSVKGDLDREIIEGYSLTVEARDQ 3701
Query: 64 G 64
G
Sbjct: 3702 G 3702
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V ASD D G N V Y + S + GEI DLD+E R+++ V A
Sbjct: 6006 VITVLASDSDVGENGSVTYQIVGGNSGSTFALRSRGKGEIVAVGDLDYEDRTNFTLFVEA 6065
Query: 61 TDRG 64
D G
Sbjct: 6066 RDGG 6069
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++RVSASD D G+N V Y++ PS+ ++ F + +G+I + DL + VV
Sbjct: 9096 LVRVSASDADSGLNGAVTYSI--LPSQFSDRFVINKTTGDIFFS-DLALNQSFNASLEVV 9152
Query: 60 ATDRG 64
A D G
Sbjct: 9153 AEDSG 9157
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A D D G NA+ Y+L S ++ F + SG+I + + +D ES+ Y+F V A D
Sbjct: 2669 VEAIDGDAGSNAVFLYSLRVSLD-SSAFRINGRSGQIQLNRKVDRESKDVYDFTVEAIDE 2727
Query: 64 G 64
G
Sbjct: 2728 G 2728
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+D D G N + Y++ ES + + F + +G I + + +D+ES ++Y + A+D
Sbjct: 4893 VKATDDDIGANGDILYSI-ESGNTRDSFDVGRRNGHITLQRAVDYESVTNYSLIISASDG 4951
Query: 64 GKET 67
G T
Sbjct: 4952 GSPT 4955
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA+D D GVNA + Y + + F + + +G I +A LDFE +Y+ + A
Sbjct: 8377 IVTVSATDGDRGVNAKILYAI--TSGDQGSFDVNNETGVITLAAALDFERVENYQLVITA 8434
>gi|354508290|ref|XP_003516186.1| PREDICTED: protocadherin alpha-9-like, partial [Cricetulus griseus]
Length = 306
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D GVN V Y+ SP + F++ VSGEI + +D+E +Y+ P+
Sbjct: 145 VIKVNASDSDEGVNGEVMYSFSSDISPDIKSKFHIDVVSGEITVTGVIDYEESKTYKIPL 204
Query: 59 VATDRG 64
A D+G
Sbjct: 205 EARDKG 210
>gi|345308717|ref|XP_001521137.2| PREDICTED: hypothetical protein LOC100092558 [Ornithorhynchus
anatinus]
Length = 1660
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV ASD D GVNA + ++ + PSR F + +SGEI LD+ES YE V
Sbjct: 1047 VLRVEASDRDEGVNAQITFSFRGIDDPSR-QVFNLDPISGEIVTGWSLDYESAKGYELDV 1105
Query: 59 VATDRG 64
A+D G
Sbjct: 1106 EASDGG 1111
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+DPD G N+ V Y+ + F++ S++GEI I ++LD+E SYE +
Sbjct: 261 ILRVNATDPDEGTNSEVTYSFRTKNEKFLKLFHLNSLTGEISILENLDYEESESYEVEIQ 320
Query: 60 ATDRGK 65
A D +
Sbjct: 321 AKDNAE 326
>gi|281345414|gb|EFB20998.1| hypothetical protein PANDA_000355 [Ailuropoda melanoleuca]
Length = 2559
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+ S T+ F + ++SGE+ + + LDFE+RSSYE +
Sbjct: 2033 VVKVSARDLDTGTNGEISYSYFYSSQETSTTFELNNLSGEVRLIKKLDFETRSSYELEID 2092
Query: 60 ATDRG 64
A+D G
Sbjct: 2093 ASDGG 2097
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P H + S+ +G++ + LD+E+ ++EF
Sbjct: 769 VSATDRDAGANAQVTYSL-LLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFG 827
Query: 58 VVATDRG 64
V A DRG
Sbjct: 828 VRAADRG 834
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P H + S+ +G++ + LD+E+ ++EF
Sbjct: 1467 VSATDRDAGANAQVTYSL-LLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFG 1525
Query: 58 VVATDRG 64
V A DRG
Sbjct: 1526 VRAADRG 1532
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P H + S+ +G++ + LD+E+ ++EF
Sbjct: 2245 VSATDRDAGANAQVTYSL-LLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFG 2303
Query: 58 VVATDRG 64
V A DRG
Sbjct: 2304 VRAADRG 2310
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ VSA D D G N V Y+ E SRT F + ++GEI + + LDFE SYE
Sbjct: 1202 IVTVSAGDLDTGTNGEVFYSFFYGDEEISRT--FALNELTGEINLIRKLDFEKIMSYELD 1259
Query: 58 VVATD 62
+ A+D
Sbjct: 1260 IKASD 1264
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++RVSA+D D G+ ++Y+ S F + SVSGEI + LDFE SY +
Sbjct: 556 VVRVSATDLDAGIYGELSYSFSHVSTDIRKTFEIHSVSGEIHLKALLDFELIQSYTINIQ 615
Query: 60 ATDRG 64
A D G
Sbjct: 616 AIDGG 620
>gi|156717266|ref|NP_001096175.1| protocadherin 1 [Xenopus (Silurana) tropicalis]
gi|134026144|gb|AAI35900.1| pcdh1 protein [Xenopus (Silurana) tropicalis]
Length = 1047
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA+D D G N+ ++Y++ PS F + SG+I + LD E R Y+F VVA
Sbjct: 533 VMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVA 592
Query: 61 TDRG 64
D+G
Sbjct: 593 VDKG 596
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D GVNA ++Y+ ++ ++ +G I + +D E + +F VV
Sbjct: 307 VLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVV 366
Query: 60 ATDRG 64
A D+G
Sbjct: 367 AKDKG 371
>gi|301753523|ref|XP_002912646.1| PREDICTED: protocadherin beta-15-like [Ailuropoda melanoleuca]
Length = 796
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+ S T+ F + ++SGE+ + + LDFE+RSSYE +
Sbjct: 261 VVKVSARDLDTGTNGEISYSYFYSSQETSTTFELNNLSGEVRLIKKLDFETRSSYELEID 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P H + S+ +G++ + LD+E+ ++EF
Sbjct: 473 VSATDRDAGANAQVTYSL-LLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFG 531
Query: 58 VVATDRG 64
V A DRG
Sbjct: 532 VRAADRG 538
>gi|397518036|ref|XP_003829204.1| PREDICTED: protocadherin alpha-2 [Pan paniscus]
Length = 808
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGSNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 6 ASDPDCGVNAMVNYTLGESP-----SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
ASD D GVNA+++Y L S +TN +S+S + + + LD E + +VA
Sbjct: 157 ASDADIGVNALLSYKLSSSEFFFLDIQTNDELSESLS--LVLGKSLDREETAEVNLLLVA 214
Query: 61 TDRGK 65
TD GK
Sbjct: 215 TDGGK 219
>gi|383864925|ref|XP_003707928.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Megachile rotundata]
Length = 5000
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V +D D G+N V Y+L E R HF + +G+I + ++LD E+ SY VVA
Sbjct: 1218 LLKVYTTDADEGLNGDVFYSLEEGNER-GHFAIDEATGQISLTKELDRETSDSYVLTVVA 1276
Query: 61 TDRGKETQ 68
D G ET+
Sbjct: 1277 HDAGLETR 1284
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 1 MLRVSASDPD-CGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSA+D D G N M+ Y + R N F++ +++G + I + LD++ Y +
Sbjct: 3161 ILTVSATDDDQHGPNGMIRYKISAGNER-NEFFVHAITGAVTILEPLDYDLVQEYRLNIT 3219
Query: 60 ATDRGKETQ 68
ATD G E +
Sbjct: 3220 ATDLGFEPK 3228
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+++SD D G NA V Y+ ++P + F M S+SG + + LD E + Y +V
Sbjct: 2831 VIRITSSDRDIGQNANVTYSFTDNPGK--KFAMDSLSGNVTVDGHLDREEQDEYLLKLVV 2888
Query: 61 TD 62
D
Sbjct: 2889 AD 2890
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+VSA D D G N V+Y L T+ F + S +GEI LD E +SYE V A D
Sbjct: 2730 KVSAKDRDSGENGQVSYYLVND--FTDTFVVDSDTGEISTNAKLDREEIASYELIVEARD 2787
Query: 63 RGK 65
+G+
Sbjct: 2788 QGQ 2790
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G N V Y+L ++ T F + V G + ++ LD E RS+Y V A
Sbjct: 2096 VMAIKAVDRDEGRNGYVEYSLEDT---TLPFTVGPVDGLLRVSGSLDRELRSNYTLEVTA 2152
Query: 61 TDRGK 65
DRG+
Sbjct: 2153 RDRGE 2157
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R A+D D G N+ + + + +R + FY+ ++G + + + LD+E Y V
Sbjct: 1324 LVRFKATDDDLGPNSELAFAISAG-NRRDTFYVDPLTGTLYLKKPLDYEELERYTLNVTC 1382
Query: 61 TDRG 64
+D G
Sbjct: 1383 SDGG 1386
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+SA D D G N V Y+ S SR F + ++G++ LD E+ Y V+A
Sbjct: 569 LSAVDNDQGTNGSVAYSFHSSVSRDYPKTFALDGLTGQLTTKIGLDRETIGEYRILVIAK 628
Query: 62 DRGKETQ 68
D+G Q
Sbjct: 629 DQGSPPQ 635
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N V Y++ + F + G I +A++L+FE +S Y +
Sbjct: 2199 VLQVSAMDRDEGANGRVRYSISMGDDNRD-FTISEDGGVIRVAKNLNFERKSKYHLTIRG 2257
Query: 61 TDRGKE 66
D E
Sbjct: 2258 EDCASE 2263
>gi|262263233|tpg|DAA06610.1| TPA_inf: protocadherin gamma b8 isoform [Anolis carolinensis]
Length = 939
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA +NY P RT F + S G+I + +DLDFE Y +
Sbjct: 262 VVQVKATDRDAGSNAQINYGFRNIPERTRQKFILDSQDGKITVKEDLDFEETEKYVMTIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDGG 326
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS--------GEICIAQDLDFESRSSYEFP 57
A DPD GVNA+ +Y L N ++ V E+ + + LD ES SS+
Sbjct: 158 AEDPDIGVNALQDYHL-----NNNKYFALEVREREDGKKYAELVLNKQLDHESESSFHLI 212
Query: 58 VVATDRGK 65
+ A D G+
Sbjct: 213 LTAVDGGE 220
>gi|194580186|gb|ACF75934.1| protocadherin alpha 7 [Mus musculus]
Length = 475
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D GVN V Y+ S + + F+M +VSGEI + +DFE +Y+ P+
Sbjct: 219 VIKVNASDLDEGVNGDVMYSFSSDVSSNIKSKFHMDTVSGEITVIGIIDFEESKAYKIPL 278
Query: 59 VATDRG 64
A D+G
Sbjct: 279 EARDKG 284
>gi|128485556|ref|NP_001076052.1| protocadherin alpha-2 precursor [Pan troglodytes]
gi|62510902|sp|Q5DRF0.1|PCDA2_PANTR RecName: Full=Protocadherin alpha-2; Short=PCDH-alpha-2; Flags:
Precursor
Length = 948
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGSNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 6 ASDPDCGVNAMVNYTLGESP-----SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
ASD D GVNA+++Y L S +TN +S+S + + + LD E + +VA
Sbjct: 157 ASDADIGVNALLSYKLSSSEFFFLDIQTNDELSESLS--LVLGKSLDREETAEVNLLLVA 214
Query: 61 TDRGK 65
TD GK
Sbjct: 215 TDGGK 219
>gi|327270391|ref|XP_003219973.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 814
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA +NY P RT F + S G+I + +DLDFE Y +
Sbjct: 262 VVQVKATDRDAGSNAQINYGFRNIPERTRQKFILDSQDGKITVKEDLDFEETEKYVMTIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDGG 326
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS--------GEICIAQDLDFESRSSYEFP 57
A DPD GVNA+ +Y L N ++ V E+ + + LD ES SS+
Sbjct: 158 AEDPDIGVNALQDYHL-----NNNKYFALEVREREDGKKYAELVLNEQLDHESESSFHLI 212
Query: 58 VVATDRGK 65
+ A D G+
Sbjct: 213 LTAVDGGE 220
>gi|402872840|ref|XP_003900307.1| PREDICTED: protocadherin gamma-B1 [Papio anubis]
Length = 810
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + S +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNSNTGDITTNGTLDFEETSRYVLGVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
>gi|395736292|ref|XP_002816064.2| PREDICTED: protocadherin gamma-B2 [Pongo abelii]
Length = 824
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D G+NA + Y+ + HF+ + +GEI DLDFE SSY +
Sbjct: 274 VLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYALSIE 333
Query: 60 ATDRG 64
A D G
Sbjct: 334 AKDPG 338
>gi|297676176|ref|XP_002816020.1| PREDICTED: protocadherin alpha-2 [Pongo abelii]
Length = 809
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGSNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 6 ASDPDCGVNAMVNYTLGESP-----SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
ASD D GVNA+++Y L S +TN +S+S + + + LD E + +VA
Sbjct: 157 ASDADIGVNALLSYKLSSSEFFFLDIQTNDELSESLS--LVLGKSLDREETAEVNLLLVA 214
Query: 61 TDRGK 65
TD GK
Sbjct: 215 TDGGK 219
>gi|390354063|ref|XP_003728252.1| PREDICTED: protocadherin Fat 1-like [Strongylocentrotus purpuratus]
Length = 1207
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++S +D D N+ V Y + +S ++T HF++ + SG I + LD+E + F VVA
Sbjct: 1112 VLQISTTDQDSPKNSGVRYQIVQSDNQTGHFHIAANSGLILTSHVLDYEEHKMHNFVVVA 1171
Query: 61 TDRG 64
TD G
Sbjct: 1172 TDSG 1175
>gi|348511876|ref|XP_003443469.1| PREDICTED: protocadherin Fat 4 [Oreochromis niloticus]
Length = 4971
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D N ++ Y + E + F + S SG++ + LD+ES SSY ++A
Sbjct: 1205 LLRVSASDVDENKNGLLRYHIAEG-NEEGQFTIDSSSGQVTLVGKLDYESTSSYSLKIIA 1263
Query: 61 TDRG 64
D G
Sbjct: 1264 VDAG 1267
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V ASD D G N + +++ + ++ F + SV+G I +A+ LD E+RSSY V A
Sbjct: 2149 VIQVFASDADEGTNGQIRFSISGGNTNSD-FRIDSVTGVISVAKQLDREARSSYSLVVQA 2207
Query: 61 TDRG 64
DRG
Sbjct: 2208 ADRG 2211
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V++SD D GVN +++ T G F + +G+I + LD E R++Y+ VVA
Sbjct: 2359 VLLVNSSDADVGVNGVISLTGGHG-----QFSINPATGQIITSSLLDREDRANYQLLVVA 2413
Query: 61 TDRGK 65
TD G+
Sbjct: 2414 TDGGQ 2418
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L ++ASD D G NA + Y L E F + +G I I + LD+ES+ Y + A
Sbjct: 254 ILEITASDQDEGANAEIRYFLDEG----TPFQIDPKAGTIIIKESLDYESKKEYSLTIHA 309
Query: 61 TDRG 64
D G
Sbjct: 310 VDNG 313
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N + Y + E ++ N F + +GEI + LD E + Y V A
Sbjct: 2663 VLMVSAVDLDSGPNGQLEYAIIEG-NKENSFSINRATGEIRTTRPLDREKVALYTLKVKA 2721
Query: 61 TDRG 64
TDRG
Sbjct: 2722 TDRG 2725
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N MV Y+L ++P H + K G I + L+ + SSYE V A
Sbjct: 888 IFQAKASDPDEGANGMVVYSLKQNPKGLFHIHEK--HGLITLTGPLEI-TTSSYEIEVSA 944
Query: 61 TDRG 64
+D G
Sbjct: 945 SDMG 948
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A D D +N ++ Y++ + R NHF + +G I ++++D E + +E + A
Sbjct: 1415 VMTITAQDTDADINGLLQYSIVQQIPRGNHFSIDPSTGLIYTSKEIDREFSNLFELTIKA 1474
Query: 61 TDRG 64
TD+
Sbjct: 1475 TDQA 1478
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ A+D D G N+ V Y+L P N F + ++ G++ + +LD E S+Y VVA
Sbjct: 2045 VFTTQATDADSGPNSYVEYSL-RGP-FGNKFSIGTIDGDVRLIGELDREELSNYTLTVVA 2102
Query: 61 TDRGK 65
TD+G+
Sbjct: 2103 TDKGE 2107
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+ +D D G NA + Y++ + NH F + +G I + + LDFE++S Y+ + A
Sbjct: 1313 VTGTDADSGQNADITYSITAT---NNHGTFSISPNTGSIFLVKKLDFETQSFYKLNITAK 1369
Query: 62 DRGK 65
D G+
Sbjct: 1370 DNGR 1373
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 4 VSASDPDCGVNAMVNY--TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
VSA+DPD G N V Y T G+S + F + S +G+I LD E +++Y+ V A
Sbjct: 688 VSATDPDLGRNGTVKYFITAGDS----SKFRINSNTGKITTLVPLDREEKTAYQLQVTAA 743
Query: 62 D 62
D
Sbjct: 744 D 744
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ +SASD D G N + ++ E+P+ F + VSG + A +LD E ++SY +
Sbjct: 577 LVVLSASDDDLGANGTIRFSFDAETPASVQELFRLDVVSGRLSTAVELDREDQASYLLHI 636
Query: 59 VATDRG 64
A D G
Sbjct: 637 QAADAG 642
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V A DPD G N V Y L E S T F M SG+I +A L SR Y V A
Sbjct: 1523 LTTVVAFDPDDGANGEVEYELVEGDSDT--FIMDRYSGDIRLASQL-VPSRLMYTLTVSA 1579
Query: 61 TDRGKE 66
TD G +
Sbjct: 1580 TDHGTD 1585
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA D D +N ++ Y + S + F + S +G + +A LDFE + +E V ATD
Sbjct: 3087 LSARDKDKEMNGLITYNI-TSGNDKGLFALNSRTGVLSLAHPLDFEEKQQHELRVSATDG 3145
Query: 64 G 64
G
Sbjct: 3146 G 3146
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A+D D G NA+V YT+ + F + SG++ + LD E RS Y +V
Sbjct: 1735 IMQLTATDADEGPNALVTYTIISGAD--DSFRIDPESGDLIATKKLDRERRSKYSL-LVR 1791
Query: 61 TDRGKET 67
D GK++
Sbjct: 1792 ADDGKQS 1798
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D GVN V Y L E F + V+G + + LD+E++ Y A D
Sbjct: 1839 ILASDSDSGVNGEVTYLL-EEDDEDETFLLNPVTGFFNVTRPLDYETQQYYILTAKAQDG 1897
Query: 64 GKE 66
G +
Sbjct: 1898 GGQ 1900
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDP-DCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A D D G+N+ V Y + S +N F + SG I +A L + ++ +
Sbjct: 2978 LLRVVAQDKKDFGLNSEVEYLMTGGNS-SNKFKLDKTSGWITVASSLTSDMNKIFQIKIT 3036
Query: 60 ATDRGK 65
A+D+G
Sbjct: 3037 ASDKGN 3042
>gi|432098834|gb|ELK28329.1| Protocadherin Fat 2 [Myotis davidii]
Length = 4335
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+R +Y F V
Sbjct: 2817 VIQVTANDQDTGKDGQVSYRLPMDPDSNIHELFAIDSETGWITTLQELDCETRQTYHFYV 2876
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2877 VAYDHGRTIQ 2886
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3341 VLTVSATDEDGPLNSAITYSLVGG-NQLGHFAIDPKKGELQVAKALDWEQTSSYSLRLRA 3399
Query: 61 TDRGK 65
TD G+
Sbjct: 3400 TDSGR 3404
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+ES+ + V
Sbjct: 2290 VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYESQQHFHVKVR 2349
Query: 60 ATDRG 64
A DRG
Sbjct: 2350 AMDRG 2354
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSASD D GVN V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2088 IFQVSASDQDLGVNGAVTYAFSE---EYTYFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2144
Query: 61 TDRG 64
D G
Sbjct: 2145 QDGG 2148
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A DPD G V + L T F++ ++G + + ++LDFE R+ Y + A+D
Sbjct: 946 LDAFDPDLGPAGEVQHVLLNDAHGT--FHVDLMTGALTLEKELDFERRAGYNLSLWASDN 1003
Query: 64 GK 65
GK
Sbjct: 1004 GK 1005
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF +++ +G I + + L +++ + V A+D
Sbjct: 3136 VLARDPDQGANAQVVYSLPDSAE--GHFSIEATTGVIRLEKPLRVGPQAALQLTVRASDL 3193
Query: 64 G 64
G
Sbjct: 3194 G 3194
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ S Y V
Sbjct: 733 LARLAATDPDTGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATSFYILNVTV 791
Query: 61 TDRG 64
D G
Sbjct: 792 YDLG 795
>gi|327270409|ref|XP_003219982.1| PREDICTED: protocadherin gamma-A6-like [Anolis carolinensis]
Length = 829
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHF-YMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+ A+DPD G+N V Y+L E + + + S +GEI + +LD+E S YEF V A D
Sbjct: 266 IKATDPDEGINGEVKYSLTELTKKISEMILLNSTTGEIIVVGNLDYEKSSLYEFEVEAVD 325
Query: 63 RG 64
G
Sbjct: 326 GG 327
>gi|9256584|ref|NP_061728.1| protocadherin alpha-2 isoform 1 precursor [Homo sapiens]
gi|13878430|sp|Q9Y5H9.1|PCDA2_HUMAN RecName: Full=Protocadherin alpha-2; Short=PCDH-alpha-2; Flags:
Precursor
gi|5456906|gb|AAD43704.1| protocadherin alpha 2 [Homo sapiens]
Length = 948
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGPNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
>gi|18859219|ref|NP_571284.1| protocadherin 8 precursor [Danio rerio]
gi|3201662|gb|AAC62385.1| paraxial protocadherin [Danio rerio]
Length = 950
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V A DPD G+N + Y E SPS T F + +SGE+ + +D+E++ SYE +
Sbjct: 253 VLKVHAFDPDAGINGEIVYGFVEGSPSEVTRVFQIDLISGEVTLKDIVDYETKKSYELHI 312
Query: 59 VATDRG 64
A+D G
Sbjct: 313 QASDLG 318
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSV---SGEICIAQDLDFESRSSYE 55
M V A D D G N V+Y+L ES P ++ SV SG + + DFE+ +
Sbjct: 472 MTTVVARDLDAGKNGKVSYSLVESKAPDGSSISTFVSVDPHSGSLYTLRSFDFETLKDVQ 531
Query: 56 FPVVATDRG 64
F V ATD+G
Sbjct: 532 FSVKATDKG 540
>gi|358413182|ref|XP_596806.4| PREDICTED: protocadherin beta-8 [Bos taurus]
gi|359067547|ref|XP_002689300.2| PREDICTED: protocadherin beta-8 [Bos taurus]
Length = 788
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L + S + F + +++GEI + + LDFE+ SYE +
Sbjct: 261 VVKVSATDVDTGVNGEISYSLSQASEDISKTFEINAMTGEIRLKKQLDFETTQSYEVNIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AIDTG 325
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
VSA+D D G NA V Y+L P + + +G + LD+E+ ++EF V
Sbjct: 473 VSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGHLFALTSLDYEALRAFEFRVG 532
Query: 60 ATDRG 64
ATDRG
Sbjct: 533 ATDRG 537
>gi|126290877|ref|XP_001377277.1| PREDICTED: protocadherin alpha-8-like [Monodelphis domestica]
Length = 810
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+N + Y+ SP + FY+ S +GEI I LDFE + YE +
Sbjct: 261 VIKLNASDADEGINREIVYSFNSPASPLINDKFYVNSETGEISIQGHLDFEDVNLYEIRI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+ VSASDPD NA+V+Y+L GE P +++ + S SG++ Q LD E
Sbjct: 474 IFTVSASDPDAQENALVSYSLVERRVGERP-LSSYVSVHSESGKVYALQPLDHEELELLH 532
Query: 56 FPVVATDRG 64
F V A D G
Sbjct: 533 FQVNARDAG 541
>gi|426350395|ref|XP_004042761.1| PREDICTED: protocadherin alpha-2 [Gorilla gorilla gorilla]
Length = 1443
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 907 VVKLNASDADEGSNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 966
Query: 59 VATDRG 64
ATD+G
Sbjct: 967 TATDKG 972
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++ASD D GVN V ++ SR F + S SGEI + LD+E SYE V A
Sbjct: 264 LNASDADEGVNGEVVFSFDSGISRDIQEKFKVDSSSGEIRLIDKLDYEETKSYEIQVKAV 323
Query: 62 DRG 64
D+G
Sbjct: 324 DKG 326
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 6 ASDPDCGVNAMVNYTLGESP-----SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
ASD D GVNA+++Y L S TN +S+S + + + LD E + +VA
Sbjct: 803 ASDADIGVNALLSYKLSSSEFFFLDIETNDELSESLS--LVLGKSLDREETAEVNLLLVA 860
Query: 61 TDRGK 65
TD GK
Sbjct: 861 TDGGK 865
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSA D D NA+V+Y+L E + +N+ + + SG++ Q LD E +F
Sbjct: 474 IFTVSAWDADAQENALVSYSLVERRVGERALSNYVSVHAESGKVYALQPLDHEELELLQF 533
Query: 57 PVVATDRG 64
V A D G
Sbjct: 534 QVSARDAG 541
>gi|363745768|ref|XP_426993.3| PREDICTED: protocadherin beta-15-like, partial [Gallus gallus]
Length = 461
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D GVN ++Y +S R + F + S +GEI IA+ LDFE+ +E V
Sbjct: 131 VLRVVANDADEGVNGDISYQFSQSVGHRHSLFTINSKTGEIGIAKPLDFETEKKHELTVQ 190
Query: 60 ATDRG 64
A D G
Sbjct: 191 AIDGG 195
>gi|13111911|gb|AAH03126.1| Protocadherin alpha 2 [Homo sapiens]
Length = 808
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGPNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
>gi|391336953|ref|XP_003742839.1| PREDICTED: protocadherin Fat 4-like [Metaseiulus occidentalis]
Length = 2971
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A DPD G N +V Y LG N FY+ S G + LDFE + Y V+A D
Sbjct: 2362 QIRAFDPDAGENGLVFYKLGGG--HDNRFYIDSKDGTVWTLSKLDFEQQEFYNMTVIAYD 2419
Query: 63 RGK 65
+GK
Sbjct: 2420 QGK 2422
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V ASD D G + V Y + S S F + SG+I + Q LD+E E V A
Sbjct: 1201 LVQVHASDQDEGRSGKVFYRIVRS-SMKGAFKIDETSGKITLVQALDYEKTKHLEIFVEA 1259
Query: 61 TDRGKETQ 68
D KE Q
Sbjct: 1260 RDDAKEQQ 1267
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 6 ASDPDCGVNA-MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G N +V + + S + F + + +G + + DLD+E+++S+EF V+A D G
Sbjct: 691 AFDIDAGENGRLVQFMINGSEDK---FAVNNETGALMLISDLDYETQTSHEFIVLAVDGG 747
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A D D G N V+Y L F++ +GE+ LD E++ Y F V+A D
Sbjct: 2257 LRAVDEDKGKNGAVDYALLVRKDEQLPFHIDVHTGELFATGILDRETKDKYLFQVLALDN 2316
Query: 64 GKETQ 68
G+ Q
Sbjct: 2317 GEVPQ 2321
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 4 VSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A+DPD N + Y G P T F + VSG I + + LD Y +VA+D
Sbjct: 1841 VKATDPDTAANTRMRYRFAGNDP--TIPFEIDPVSGAINVTRHLDISESQEYTLTLVASD 1898
Query: 63 RGKETQ 68
+ Q
Sbjct: 1899 GKWDAQ 1904
>gi|119582397|gb|EAW61993.1| hCG1982192, isoform CRA_h [Homo sapiens]
Length = 948
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGPNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
>gi|47196998|emb|CAF87261.1| unnamed protein product [Tetraodon nigroviridis]
Length = 166
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN V Y LG S N F + S SGEI ++ +DFE +S+E V
Sbjct: 100 VMQVSATDADEGVNGDVTYNLGHTSDDDANIFMIDSKSGEIRVSGTVDFEESNSFEMRVQ 159
Query: 60 ATD 62
A D
Sbjct: 160 AKD 162
>gi|281339742|gb|EFB15326.1| hypothetical protein PANDA_009494 [Ailuropoda melanoleuca]
Length = 4593
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V ASD D G N V Y+L +S S F + +G I ++LD E R SY+ V
Sbjct: 2833 VIQVRASDLDSGTNGQVTYSLDQSQSMEVIESFAINVETGWITTLKELDHEKRDSYQIQV 2892
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2893 VASDHGEKVQ 2902
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 945 IMWLEAYDPDLGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQHLDFEKKQVYNLT 999
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1000 VRAKDKGK 1007
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RVSA+D D G N Y+ + RT+ F + SG + + LD+ YE ++A D
Sbjct: 169 RVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGAVVLTGRLDYAETKLYELEILAVD 225
Query: 63 RG 64
RG
Sbjct: 226 RG 227
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+L+V+A D D G NA V Y++ G + N F + + G I A++LD ES+ Y+
Sbjct: 1580 VLQVTALDKDKGKNAEVLYSIESGIFGALRNIGNSFTIDPILGSIKTAKELDRESQVEYD 1639
Query: 56 FPVVATDRG 64
V ATD+G
Sbjct: 1640 LMVKATDQG 1648
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L S F + +SG I + + LD E ++ Y + A
Sbjct: 3149 LTRVQATDRDSGLNRKISYSLVNSVD--GQFSINELSGIIQLEKPLDREQQAVYSLTLKA 3206
Query: 61 TDRG 64
D+G
Sbjct: 3207 VDQG 3210
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+VSA+D D NA + YT LG + F + +GE+ LD E + Y V
Sbjct: 3047 ILQVSATDADIRSNAEITYTLLGPGAEK---FTLNPDTGELRTLAPLDREEQGVYNLLVK 3103
Query: 60 ATDRG 64
ATD G
Sbjct: 3104 ATDGG 3108
>gi|14165405|ref|NP_113683.1| protocadherin alpha-2 isoform 2 precursor [Homo sapiens]
gi|5457009|gb|AAD43741.1|AF152480_1 protocadherin alpha 2 short form protein [Homo sapiens]
gi|3540168|gb|AAC34324.1| KIAA0345-like 12 [Homo sapiens]
Length = 824
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGPNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
>gi|119582403|gb|EAW61999.1| hCG1982192, isoform CRA_n [Homo sapiens]
Length = 824
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGPNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
>gi|301770611|ref|XP_002920723.1| PREDICTED: protocadherin Fat 1-like [Ailuropoda melanoleuca]
Length = 4587
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V ASD D G N V Y+L +S S F + +G I ++LD E R SY+ V
Sbjct: 2827 VIQVRASDLDSGTNGQVTYSLDQSQSMEVIESFAINVETGWITTLKELDHEKRDSYQIQV 2886
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2887 VASDHGEKVQ 2896
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 945 IMWLEAYDPDLGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQHLDFEKKQVYNLT 999
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1000 VRAKDKGK 1007
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD ES+ Y+ V A
Sbjct: 1580 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFTIDPILGSIKTAKELDRESQVEYDLMVKA 1638
Query: 61 TDRG 64
TD+G
Sbjct: 1639 TDQG 1642
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RVSA+D D G N Y+ + RT+ F + SG + + LD+ YE ++A D
Sbjct: 169 RVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGAVVLTGRLDYAETKLYELEILAVD 225
Query: 63 RG 64
RG
Sbjct: 226 RG 227
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L S F + +SG I + + LD E ++ Y + A
Sbjct: 3143 LTRVQATDRDSGLNRKISYSLVNSVD--GQFSINELSGIIQLEKPLDREQQAVYSLTLKA 3200
Query: 61 TDRG 64
D+G
Sbjct: 3201 VDQG 3204
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+VSA+D D NA + YT LG + F + +GE+ LD E + Y V
Sbjct: 3041 ILQVSATDADIRSNAEITYTLLGPGAEK---FTLNPDTGELRTLAPLDREEQGVYNLLVK 3097
Query: 60 ATDRG 64
ATD G
Sbjct: 3098 ATDGG 3102
>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
Length = 4981
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL +PS N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTL-LNPS-GNKFTIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRG 64
TD+G
Sbjct: 2127 TDKG 2130
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G+N + Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGLNGTIKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGSNGLIHYSVIKG-NEERQFAIDSTSGQVTLIGRLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDMGSPPQ 669
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +V A+D D G N V Y + + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2173 ITQVFAADGDEGTNGQVRYGIVDG-NANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFTINERNGNISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + ++ + F + +GEI + LD E S Y V +
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIING-NKEHSFSINHATGEIRSIRPLDREKISQYVLIVKS 2745
Query: 61 TDRGKETQ 68
+DRG +Q
Sbjct: 2746 SDRGSPSQ 2753
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G + LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTIQSSDS--DLFVIDPNTGVVTTQGFLDFETKQSYHLTVKA 3270
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 VLQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELRVTQSLDRETKEHFVLLITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y++ S + F + S +G + +A+ LD+E +E V ATD
Sbjct: 3111 VSARDRDTAMNGLIRYSI-SSGNEEGIFAINSSTGVLTLAKALDYELCQKHEMTVSATDG 3169
Query: 64 G 64
G
Sbjct: 3170 G 3170
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+ASD D NA++ G S F + +G+I + LD E++ +Y VVA
Sbjct: 2383 VILVNASDIDASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKENYTLVVVA 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRMLDYETQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D GVNA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGVNAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|432879584|ref|XP_004073499.1| PREDICTED: uncharacterized protein LOC101171842 [Oryzias latipes]
Length = 8377
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV+A+DPD G N V Y+L + R + F + SGEI + DLDFE +Y+ + A
Sbjct: 6318 RVNATDPDQGSNGEVEYSLSKMLPRKVYDIFDLDISSGEIKLKGDLDFEESETYKLDIQA 6377
Query: 61 TDRGK 65
+D+G+
Sbjct: 6378 SDKGQ 6382
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ V A+D D G NA+++Y L GE T+ + S +GE+ + DFES +++F
Sbjct: 7247 VFSVQATDHDEGENALISYNLFRNAGEDNKMTSFLSINSDNGEVVALKSFDFESVKTFQF 7306
Query: 57 PVVATDRG 64
VVATD G
Sbjct: 7307 HVVATDSG 7314
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+D D G N + YT G++ + H F + V+GEI + ++DFE Y V
Sbjct: 2255 VIKLNATDLDEGSNGDIEYTFGKTQRKKAHEVFELDRVTGEIRVKGNVDFEETELYRLDV 2314
Query: 59 VATDRGK 65
A+D+G+
Sbjct: 2315 QASDKGQ 2321
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+DPD G N V Y G+ + F + +GEI + +D+E+ Y+ V A
Sbjct: 3964 ILKVQATDPDEGPNGDVEYAFGDDMTSIALFAIDRNTGEIRVKGHIDYETADVYKLDVQA 4023
Query: 61 TDRGK 65
+D+G+
Sbjct: 4024 SDKGQ 4028
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G NA + Y+ G E +T+ F + +GEI + +DFE SYE V
Sbjct: 7822 VIQVNATDLDKGANAEIVYSFGNEVNQKTSELFSINEKTGEITVKGQIDFEKSKSYEIDV 7881
Query: 59 VATDRGK 65
A+D+G+
Sbjct: 7882 QASDKGQ 7888
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR---TNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+L V+ASD D GVN+ + Y+L S R ++ F + S +G++ + +LD+E + YE
Sbjct: 1572 LLTVNASDSDEGVNSEIEYSL-RSKFRGLVSDPFALNSKTGKVTVNGNLDYEEKQVYEIN 1630
Query: 58 VVATDRG 64
V+A D+G
Sbjct: 1631 VMAADKG 1637
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSA D D NA V+Y L GE+ T+ + + +GEI + DFE +++F
Sbjct: 4176 IFSVSAVDKDLNENAAVSYHLIRGEGENKDLTSFLNIHAETGEISALKSFDFERLKTFQF 4235
Query: 57 PVVATDRG 64
VVATD G
Sbjct: 4236 HVVATDSG 4243
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ V+A+D D GVNA V Y+ G P F + SGEI + ++DFE Y+ V
Sbjct: 3021 VITVNATDLDEGVNADVEYSFGGELDPQIYEIFSINKHSGEISVKGEIDFEKAEVYKLDV 3080
Query: 59 VATDRGK 65
A+D+G+
Sbjct: 3081 HASDKGQ 3087
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ V ASD D NA + Y +G S+ T+ + S +GEI + DFES +++F
Sbjct: 2469 VFSVKASDNDQNENAAITYHVGRRDSQQADVTSFLNINSETGEISALKSFDFESVKTFQF 2528
Query: 57 PVVATDRG 64
VVATD G
Sbjct: 2529 HVVATDSG 2536
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR---TNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+ VSASD D NA + Y+L S T+ + V+G I + DFES +++F
Sbjct: 1786 IFSVSASDKDGAENAEITYSLDRKSSGSIVTSFLNINEVNGTISALKSFDFESVKTFQFH 1845
Query: 58 VVATDRG 64
VVATD G
Sbjct: 1846 VVATDSG 1852
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G+N V Y+ G E + F+ + S +GEI + ++DFE + ++ +
Sbjct: 7033 VIQVNATDLDDGINGEVTYSFGGEVKDKIREFFEINSDTGEIIVKGNIDFELQDRFDIDI 7092
Query: 59 VATDRG 64
A+D+G
Sbjct: 7093 QASDKG 7098
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ V A D D G NA+V+Y + N F + S SGE+ + DFES +++F
Sbjct: 8036 VFSVKAFDRDDGENALVSYGILRERDTDNLFTSFLNVNSESGEVVALKSFDFESVKTFQF 8095
Query: 57 PVVATDRG 64
+VATD G
Sbjct: 8096 HIVATDSG 8103
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ VSA D D N+ + Y + T+ + S +G+I + DFES +++F VVA
Sbjct: 6530 VFSVSAEDMDVNENSAILYHIVRENDATSFLSINSENGQISALKSFDFESVKTFQFHVVA 6589
Query: 61 TDRG 64
TD G
Sbjct: 6590 TDSG 6593
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMV--NYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L ++A+D D G N+ + +Y+L S F++ SGEI + L++E + Y+ V
Sbjct: 436 VLHLNATDSDEGSNSDITYSYSLYTSEKTQETFHLNPTSGEITVRGMLNYEEFNIYDMEV 495
Query: 59 VATDRG 64
+ATD+G
Sbjct: 496 IATDKG 501
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMV--NYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+D D G NA V +Y+L S N F + +GEI + + +++E YE V
Sbjct: 994 VIKLNATDLDEGSNADVVYSYSLYTSERTQNVFQLNPENGEIRVKEMINYEDLQLYEMEV 1053
Query: 59 VATDRG 64
+A+D+G
Sbjct: 1054 IASDKG 1059
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L ++ASD D G N + Y+ G++ + + F + +GEI + +DFE Y+ V
Sbjct: 4748 ILTMNASDLDEGTNGEIEYSFGKTLKKRVYEAFQLDRKTGEIRVKGTVDFEETDVYKLDV 4807
Query: 59 VATDRG 64
A+D+G
Sbjct: 4808 EASDKG 4813
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+ VSA+D D NA+++Y + G + + S +G+I + DFES +++F
Sbjct: 4962 LFSVSATDMDLNENAVISYHIVKEGTNNDVNAVLNINSENGQIIGMKSFDFESVKTFQFH 5021
Query: 58 VVATDRG 64
VVATD G
Sbjct: 5022 VVATDSG 5028
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ V A D D G NA+V+Y + + N + S +G+I + DFES +++F
Sbjct: 5756 VFSVKAFDRDDGENALVSYGILREMNSDNKLSSFLSINSETGDISALKSFDFESVKTFQF 5815
Query: 57 PVVATDRG 64
VVATD G
Sbjct: 5816 HVVATDSG 5823
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-------GESPSR-TNHFYMKSVSGEICIAQDLDFESRS 52
+++V+A D D G NA + Y+ E S+ T F + +GEI + +DFE
Sbjct: 5536 VIQVNAKDLDKGANAEIVYSFEIVYSFGNEVKSKITELFSINEKTGEITVKGQIDFEKSK 5595
Query: 53 SYEFPVVATDRG 64
YE V A+D+G
Sbjct: 5596 IYEIDVQASDKG 5607
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 4 VSASDPDCGVNAMVNYTL-GESPSRTNHFYMK--SVSGEICIAQDLDFESRSSYEFPVVA 60
VSA D D NA++ Y + G++ + ++ +GEI + DFES +++F VVA
Sbjct: 3238 VSALDKDLNENAILTYVVRGDTGQLISAAFLNINPETGEISALKSFDFESVKTFQFHVVA 3297
Query: 61 TDRG 64
TD G
Sbjct: 3298 TDSG 3301
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGE------ICIAQDLDFESRSSYEFPV 58
+A DPD G+N++ YTL + +HF + + + + + LD E + +Y F V
Sbjct: 4644 AARDPDAGINSIRTYTL----TSNDHFELDIRQSDDDKIPFLVLKKSLDRELKHNYAFVV 4699
Query: 59 VATDRGK 65
A D GK
Sbjct: 4700 TAVDGGK 4706
>gi|300794761|ref|NP_001178634.1| protocadherin Fat 4 [Rattus norvegicus]
Length = 4979
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL +P+ N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTL-LNPA-GNKFSIGTIDGEVHLTGELDREEVSNYSLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVNA ++YT+ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGVNADLHYTITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
TDRG
Sbjct: 326 TDRG 329
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDMGPNGTVKYSI--SAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G N V Y + + F + SV+G I +A+ LD E+ +Y V A
Sbjct: 2173 IIQVSAADNDEGTNGQVRYGIVGGNTH-QEFRIDSVTGAITVAKSLDRETIPAYILTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I + ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSILKG-NEERQFSIDRFSGQVTLVGKLDYEATPAYSLLIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ S F + VSG + LD E ++ Y ++A
Sbjct: 602 LLVLGATDGDLGDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLILA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN V Y+L ++P N F + +G I + LD + SY+ +VA
Sbjct: 912 IFQAKAVDPDEGVNGRVLYSLKQNPK--NLFTINEQNGNISLLGTLDVHA-GSYQVEIVA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N +++Y + S + F + S +G + +A+ LD+E S +E + ATD
Sbjct: 3111 VSARDRDTAMNGLISYNI-SSGNEEGIFAINSSTGVVTLAKALDYELSSKHEMTISATDG 3169
Query: 64 G 64
G
Sbjct: 3170 G 3170
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N + Y + ++ + F + +GEI + LD E S YE V +
Sbjct: 2687 ILTVSATDKDSGPNGQLAYEIVNG-NQESSFTINHATGEIRSIRPLDREKISYYELTVKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+++ G S F + +G+I + LD E++ +Y VVA
Sbjct: 2383 VLLVNASDADAATNAVISIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVA 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY------ 54
+ +VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2891 VTQVSATDPDEGSNGQVFYFIK---SKSEYFRINATTGEIFNKQVLKYQNVSGFSNVNIN 2947
Query: 55 --EFPVVATDRGK 65
F V A+DRG
Sbjct: 2948 RHSFIVTASDRGN 2960
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGANAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + + SGE+ + Q LD E+R + V A
Sbjct: 2279 ILQVVARDDDQGPNSQLSYVL-LGGNEDNAFAL-TASGELRVTQSLDREARDHFVLVVTA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 ADAG 2340
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV+ SD D G+NA+ Y++ ++ F + +G+I I++ L+ E Y V A
Sbjct: 2791 VTRVTTSDEDIGINAISRYSIADT---ALPFTINPNTGDIVISRPLNREDTDRYRIRVSA 2847
Query: 61 TDRG 64
D G
Sbjct: 2848 HDSG 2851
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V Y L + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYALISGAD--DSFRIDPESGDLIATKRLDREHRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
>gi|392338710|ref|XP_001070073.3| PREDICTED: protocadherin Fat 4 [Rattus norvegicus]
Length = 4981
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL +P+ N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTL-LNPA-GNKFSIGTIDGEVHLTGELDREEVSNYSLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVNA ++YT+ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGVNADLHYTITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
TDRG
Sbjct: 326 TDRG 329
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDMGPNGTVKYSI--SAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G N V Y + + F + SV+G I +A+ LD E+ +Y V A
Sbjct: 2173 IIQVSAADNDEGTNGQVRYGIVGGNTH-QEFRIDSVTGAITVAKSLDRETIPAYILTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I + ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSILKG-NEERQFSIDRFSGQVTLVGKLDYEATPAYSLLIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ S F + VSG + LD E ++ Y ++A
Sbjct: 602 LLVLGATDGDLGDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLILA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN V Y+L ++P N F + +G I + LD + SY+ +VA
Sbjct: 912 IFQAKAVDPDEGVNGRVLYSLKQNPK--NLFTINEQNGNISLLGTLDVHA-GSYQVEIVA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+++Y++ S+ F + +G+I + LD E++ +Y VVA
Sbjct: 2383 VLLVNASDADAATNAVISYSIIGGNSQ---FTINPSTGQIITSALLDRETKDNYTLVVVA 2439
Query: 61 TDRG 64
+D G
Sbjct: 2440 SDAG 2443
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N +++Y + S + F + S +G + +A+ LD+E S +E + ATD
Sbjct: 3113 VSARDRDTAMNGLISYNI-SSGNEEGIFAINSSTGVVTLAKALDYELSSKHEMTISATDG 3171
Query: 64 G 64
G
Sbjct: 3172 G 3172
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N + Y + ++ + F + +GEI + LD E S YE V +
Sbjct: 2689 ILTVSATDKDSGPNGQLAYEIVNG-NQESSFTINHATGEIRSIRPLDREKISYYELTVKS 2747
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2748 SDKGSPSQ 2755
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY------ 54
+ +VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2893 VTQVSATDPDEGSNGQVFYFIK---SKSEYFRINATTGEIFNKQVLKYQNVSGFSNVNIN 2949
Query: 55 --EFPVVATDRGK 65
F V A+DRG
Sbjct: 2950 RHSFIVTASDRGN 2962
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3215 VIHLNATDADSGANAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3272
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + + SGE+ + Q LD E+R + V A
Sbjct: 2279 ILQVVARDDDQGPNSQLSYVL-LGGNEDNAFAL-TASGELRVTQSLDREARDHFVLVVTA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 ADAG 2340
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV+ SD D G+NA+ Y++ ++ F + +G+I I++ L+ E Y V A
Sbjct: 2793 VTRVTTSDEDIGINAISRYSIADT---ALPFTINPNTGDIVISRPLNREDTDRYRIRVSA 2849
Query: 61 TDRG 64
D G
Sbjct: 2850 HDSG 2853
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V Y L + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYALISGAD--DSFRIDPESGDLIATKRLDREHRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
Length = 4963
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL +PS N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2050 VFKAQATDPDSGPNSYIEYTL-LNPS-GNKFTIGTIDGEVRLTGELDREEVSNYTLTVVA 2107
Query: 61 TDRG 64
TD+G
Sbjct: 2108 TDKG 2111
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G+N + Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 693 VSATDPDLGLNGTIKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 750
Query: 64 GK 65
G
Sbjct: 751 GN 752
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1420 VISVTAHDPDADINGQLSYTIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLFELTVKA 1479
Query: 61 TDRG 64
D+
Sbjct: 1480 NDQA 1483
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1211 VLRVSASDVDEGSNGLIHYSVIKG-NEERQFAIDSTSGQVTLIGRLDYEATPAYSLVIQA 1269
Query: 61 TDRG 64
D G
Sbjct: 1270 VDSG 1273
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + + L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRFRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 584 LLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 643
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 644 TDLGSPPQ 651
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +V A+D D G N V Y + + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2154 ITQVFAADGDEGTNGQVRYGIVDG-NANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQA 2212
Query: 61 TDRG 64
TDRG
Sbjct: 2213 TDRG 2216
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1318 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1374
Query: 62 DRGK 65
D+G+
Sbjct: 1375 DQGR 1378
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 894 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFTINERNGNISLLGPLDVHA-GSYQIEILA 950
Query: 61 TDRG 64
+D G
Sbjct: 951 SDMG 954
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + ++ + F + +GEI + LD E S Y V +
Sbjct: 2670 ILTVSAVDKDSGPNGQLDYEIING-NKEHSFSINHATGEIRSIRPLDREKISQYVLIVKS 2728
Query: 61 TDRGKETQ 68
+DRG +Q
Sbjct: 2729 SDRGSPSQ 2736
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G + LDFE++ SY V A
Sbjct: 3196 VIHLNATDADSGTNAVIAYTIQSSDS--DLFVIDPNTGVVTTQGFLDFETKQSYHLTVKA 3253
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2260 VLQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELRVTQSLDRETKEHFVLLITA 2317
Query: 61 TDRG 64
TD G
Sbjct: 2318 TDSG 2321
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y++ S + F + S +G + +A+ LD+E +E V ATD
Sbjct: 3094 VSARDRDTAMNGLIRYSI-SSGNEEGIFAINSSTGVLTLAKALDYELCQKHEMTVSATDG 3152
Query: 64 G 64
G
Sbjct: 3153 G 3153
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+ASD D NA+++Y + S+ F + +G+I + LD E++ +Y VVA
Sbjct: 2364 VILVNASDIDASTNAVISYRIIGGNSQ---FTINPSTGQIITSALLDRETKENYTLVVVA 2420
Query: 61 TDRG 64
+D G
Sbjct: 2421 SDAG 2424
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1740 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1797
Query: 61 TD 62
D
Sbjct: 1798 DD 1799
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D GVNA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2776 RVTTSDEDIGVNAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2832
Query: 63 RG 64
G
Sbjct: 2833 SG 2834
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1844 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRMLDYEAQQYYILTVRAEDG 1902
Query: 64 GKE 66
G +
Sbjct: 1903 GGQ 1905
>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
Length = 4589
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V ASD D GVN V Y+L +S F + +G I ++LD E R+SY+ V
Sbjct: 2829 VIQVRASDLDSGVNGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKV 2888
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2889 VASDHGEKVQ 2898
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 947 IMWLEAHDPDVGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQQLDFEKKQLYNLT 1001
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1002 VRAKDKGK 1009
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LD YE ++A
Sbjct: 169 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVVVLTGRLDVLETQRYELEILA 225
Query: 61 TDRG 64
DRG
Sbjct: 226 VDRG 229
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD + Y+ V A
Sbjct: 1582 VLQVTALDRDKGRNAEVLYSI-ESGNIGNSFTIDPILGSIKTARELDRSHQVDYDLMVKA 1640
Query: 61 TDRGK 65
TD+G+
Sbjct: 1641 TDKGE 1645
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D N ++Y L G +HF++ S +G I + + LD+E ++ V
Sbjct: 2303 ILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTGLISLVRALDYEQFQQHKLLVR 2362
Query: 60 ATDRG 64
A D G
Sbjct: 2363 AVDGG 2367
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L +S F + SG + + + LD E ++ Y + A
Sbjct: 3145 LTRVQATDADAGLNRKISYSLLDSAD--GQFSINEQSGILQLEKHLDRELQAVYTLTLKA 3202
Query: 61 TDRG 64
D+G
Sbjct: 3203 ADQG 3206
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y + S + F + S +G I I ++LD+ES Y V A
Sbjct: 3250 VLQVYAASRDIEANAEITYAI-ISGNEHGKFSIDSKTGAIFIIENLDYESSHGYYLTVEA 3308
Query: 61 TDRG 64
TD G
Sbjct: 3309 TDGG 3312
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D NA + YTL S + F + +GE+ LD E ++ Y V A
Sbjct: 3043 VMQVSATDADIRSNAEITYTLFGSGAEK--FKLNPDTGELRTLALLDREEQAVYHLLVKA 3100
Query: 61 TDRG 64
TD G
Sbjct: 3101 TDGG 3104
>gi|441596469|ref|XP_004092945.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-2 [Nomascus
leucogenys]
Length = 824
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGSNSEIVYSLGSDMSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 6 ASDPDCGVNAMVNYTLGESP-----SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
ASD D GVNA+++Y L S +TN +S+S + + + LD E + +VA
Sbjct: 157 ASDADIGVNALLSYKLSSSEFFFLDIQTNDELSESLS--LVLGKSLDREETAEVNLLLVA 214
Query: 61 TDRGK 65
TD GK
Sbjct: 215 TDGGK 219
>gi|296485264|tpg|DAA27379.1| TPA: protocadherin beta 16-like [Bos taurus]
Length = 1591
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L + S + F + +++GEI + + LDFE+ SYE +
Sbjct: 261 VVKVSATDVDTGVNGEISYSLSQASEDISKTFEINAMTGEIRLKKQLDFETTQSYEVNIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AIDTG 325
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ VSASD D G+ ++YT E S+T K+ GEI + + +DFE+ SYE
Sbjct: 1052 VVTVSASDVDSGLYGKISYTFFQPSEDISKTLEVNPKT--GEIRLRKQVDFETVFSYEVD 1109
Query: 58 VVATDRG 64
V ATD G
Sbjct: 1110 VKATDGG 1116
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
VSA+D D G NA V Y+L P + + +G + LD+E+ ++EF V
Sbjct: 473 VSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGHLFALTSLDYEALRAFEFRVG 532
Query: 60 ATDRG 64
ATDRG
Sbjct: 533 ATDRG 537
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
VSA+D D G NA V Y+L P + + +G + LD+E+ ++EF V
Sbjct: 1265 VSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGHLFALTSLDYEALRAFEFRVG 1324
Query: 60 ATDRG 64
ATDRG
Sbjct: 1325 ATDRG 1329
>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
Length = 4589
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V ASD D GVN V Y+L +S F + +G I ++LD E R+SY+ V
Sbjct: 2829 VIQVRASDLDSGVNGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKV 2888
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2889 VASDHGEKVQ 2898
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 947 IMWLEAHDPDVGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQQLDFEKKQLYNLT 1001
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1002 VRAKDKGK 1009
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LD YE ++A
Sbjct: 169 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVVVLTGRLDVLETQRYELEILA 225
Query: 61 TDRG 64
DRG
Sbjct: 226 VDRG 229
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD + Y+ V A
Sbjct: 1582 VLQVTALDRDKGRNAEVLYSI-ESGNIGNSFTIDPILGSIKTARELDRSHQVDYDLMVKA 1640
Query: 61 TDRGK 65
TD+G+
Sbjct: 1641 TDKGE 1645
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D N ++Y L G +HF++ S +G I + + LD+E ++ V
Sbjct: 2303 ILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTGLISLVRALDYEQFQQHKLLVR 2362
Query: 60 ATDRG 64
A D G
Sbjct: 2363 AVDGG 2367
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L +S F + SG + + + LD E ++ Y + A
Sbjct: 3145 LTRVQATDADAGLNRKISYSLLDSAD--GQFSINEQSGILQLEKHLDRELQAVYTLTLKA 3202
Query: 61 TDRG 64
D+G
Sbjct: 3203 ADQG 3206
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y + S + F + S +G I I ++LD+ES Y V A
Sbjct: 3250 VLQVYAASRDIEANAEITYAI-ISGNEHGKFSIDSKTGAIFIIENLDYESSHGYYLTVEA 3308
Query: 61 TDRG 64
TD G
Sbjct: 3309 TDGG 3312
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D NA + YTL S + F + +GE+ LD E ++ Y V A
Sbjct: 3043 VMQVSATDADIRSNAEITYTLFGSGAEK--FKLNPDTGELRTLALLDREEQAVYHLLVKA 3100
Query: 61 TDRG 64
TD G
Sbjct: 3101 TDGG 3104
>gi|444713187|gb|ELW54095.1| Protocadherin beta-18 [Tupaia chinensis]
Length = 1696
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+VSA+D D G N ++Y+L S F + + SG+I + + LDFE+ SSYE V
Sbjct: 1367 VLKVSATDLDTGTNGEISYSLFYSSQEVGKTFELSNSSGDIRLIKKLDFETISSYELDVE 1426
Query: 60 ATDRG 64
ATD G
Sbjct: 1427 ATDGG 1431
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA V Y+L P + S+ +G++ + LD+E+ ++EF
Sbjct: 474 ISATDADAGTNAQVTYSL--LPPHDPQLALASLVSINADNGQLFALRSLDYEALRAFEFG 531
Query: 58 VVATDRG 64
V A DRG
Sbjct: 532 VRAADRG 538
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA V Y+L P + S+ +G++ + LD+E+ ++EF
Sbjct: 935 ISATDADAGTNAQVTYSL--LPPHDPQLALASLVSINADNGQLFALRSLDYEALRAFEFG 992
Query: 58 VVATDRG 64
V A DRG
Sbjct: 993 VRAADRG 999
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
VSA D D G+N + Y+ G+ +N F + ++GEI I + LDFE SY+ + A+
Sbjct: 726 VSARDLDTGINGEIFYSFFYGDE-EISNTFALNELTGEIKIIKKLDFEKIRSYKVDIKAS 784
Query: 62 D 62
D
Sbjct: 785 D 785
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+ S F + SG++ + LDFE+ SY +
Sbjct: 261 VIKVSATDLDAGVNGELSYSFSHVSRDIRKIFEIHPDSGQVYLKASLDFETIQSYTVNIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AVDGG 325
>gi|313220610|emb|CBY31457.1| unnamed protein product [Oikopleura dioica]
Length = 2507
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGE---SPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++A+D D G NA V+YT+GE +P N F + +G I +A++LD E + Y F +
Sbjct: 489 KIAATDSDSGDNARVSYTIGEGTIAPEEVNKLFKLNEETGVISLAENLDNEQKKYYSFEI 548
Query: 59 VATDRG 64
+A D G
Sbjct: 549 IAKDHG 554
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+D D G N V Y L + F + + SG+I + +DLDFE +E V A
Sbjct: 280 VISVKATDADEGENGKVTYALMND---KDTFAVDATSGDISLIRDLDFEVNRKFELRVRA 336
Query: 61 TDRGKETQ 68
D G+ Q
Sbjct: 337 QDHGRRRQ 344
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ ++ A D D G NA + Y L + N FY+ S +GE+ + + LDFE + +Y V
Sbjct: 704 IAKIEADDRDIGDNANLEYFLLPNRETNNMFYLDSATGELELREALDFEKKRNYTITV 761
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A D D G N ++Y L P+ +F + + G I + + LD E+ YE + A D
Sbjct: 600 VIAQDADEGRNGAISYQLSRVDPNEAGYFLIDTYDGTIRLGKPLDRETTPCYELEIEARD 659
Query: 63 RG 64
G
Sbjct: 660 HG 661
>gi|297674308|ref|XP_002815174.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Pongo abelii]
Length = 5022
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGKET 67
TD+G+++
Sbjct: 2127 TDKGQQS 2133
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ VVATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQVVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDSTSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
ATDRG
Sbjct: 2231 ATDRG 2235
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3255 VIHLNATDADSGTNAVIAYTIQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3312
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2729 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSIRPLDREKVSHYVLTIKS 2787
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2788 SDKGSPSQ 2795
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D +NA++ G S F + +G+I + LD E++ +Y VV
Sbjct: 2425 VLLVNASDADASMNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2479
Query: 61 TDRG 64
+D G
Sbjct: 2480 SDAG 2483
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2835 RVTTSDEDIGINAISRYSIMDT---SLPFTINPSTGDIIISRPLNREDTDRYRIRVSAHD 2891
Query: 63 RG 64
G
Sbjct: 2892 SG 2893
>gi|313226181|emb|CBY21324.1| unnamed protein product [Oikopleura dioica]
Length = 2431
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGE---SPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++A+D D G NA V+YT+GE +P N F + +G I +A++LD E + Y F +
Sbjct: 413 KIAATDSDSGDNARVSYTIGEGTIAPEEVNKLFKLNEETGVISLAENLDNEQKKYYSFEI 472
Query: 59 VATDRG 64
+A D G
Sbjct: 473 IAKDHG 478
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ ++ A D D G NA + Y L + N FY+ S +GE+ + Q LDFE + +Y V
Sbjct: 628 IAKIEADDRDIGDNANLEYFLLPNRETNNMFYLDSATGELELRQALDFEKKRNYTITV 685
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+D D G N V Y L + F + + SG I + +DLDFE +E V A
Sbjct: 204 VISVKATDADEGENGKVTYALMND---KDTFAVDATSGNISLIRDLDFEVNRKFELRVRA 260
Query: 61 TDRGKETQ 68
D G+ Q
Sbjct: 261 QDHGRRRQ 268
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A D D G N ++Y L P+ +F + + G I + + LD E+ YE + A D
Sbjct: 524 VIAQDADEGPNGAISYQLSRVDPNEAGYFLIDTYDGTIRLGKPLDRETTPCYELEIEARD 583
Query: 63 RG 64
G
Sbjct: 584 HG 585
>gi|348583041|ref|XP_003477283.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-15-like [Cavia
porcellus]
Length = 794
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA D D G NA ++Y+L S F + S SGE+ + + LDFE+ SYE + A
Sbjct: 259 IVKVSARDLDIGTNAEISYSLYSSQEIGKTFELSSSSGEVRLIKLLDFETIPSYELDIEA 318
Query: 61 TDRG 64
+D G
Sbjct: 319 SDGG 322
>gi|403256584|ref|XP_003920949.1| PREDICTED: protocadherin beta-8-like [Saimiri boliviensis
boliviensis]
Length = 1136
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S + + F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 852 VVKVSARDLDTGTNGEISYSLFYSSQAISKPFELSSISGEIRLIKKLDFETTSSYDLDIE 911
Query: 60 ATDRG 64
A+D G
Sbjct: 912 ASDGG 916
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
VSA D D G+N + Y+ E S+T F + +GEI I + LDFE +YE + A
Sbjct: 262 VSARDLDMGINGEIFYSFFYGDEEISKT--FALNERTGEIKIIRKLDFEKTVAYEVDIKA 319
Query: 61 TDRG 64
+DR
Sbjct: 320 SDRA 323
>gi|363738908|ref|XP_003642094.1| PREDICTED: protocadherin gamma-A10-like [Gallus gallus]
Length = 685
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+DPD G N V Y+L ++ + F+++ +G I + ++LDFE +SYE +
Sbjct: 376 LLRVTATDPDDGTNGDVTYSLNKATDLASEIFHLEPDTGGIRLVRNLDFEEWNSYELELQ 435
Query: 60 ATDRG 64
A D G
Sbjct: 436 ARDGG 440
>gi|348582898|ref|XP_003477213.1| PREDICTED: protocadherin alpha-8-like [Cavia porcellus]
Length = 813
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D G NA ++Y+ P T+ F + +GEI DLDFE S Y+ V
Sbjct: 261 LMRLNASDRDEGTNAAISYSFNSLVPPMVTDRFSIDPGTGEIVTRGDLDFEQVSLYKIRV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|297293338|ref|XP_002804233.1| PREDICTED: protocadherin Fat 4-like isoform 2 [Macaca mulatta]
Length = 4981
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNVQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD ++ SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINGKNGTISLLGPLDVQA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDITSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
A DRG
Sbjct: 2231 AADRG 2235
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKEQFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVVDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNG-NMENSFNINHATGEIRSVRPLDREKVSYYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+V G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVVRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|148664774|gb|EDK97190.1| mCG140841 [Mus musculus]
Length = 794
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D GVN V Y+ S + F+M +VSGEI + +DFE +Y+ P+
Sbjct: 270 VIKVNASDLDEGVNGDVMYSFSSDVSSDIKSKFHMDTVSGEITVIGIIDFEESKAYKIPL 329
Query: 59 VATDRG 64
A D+G
Sbjct: 330 EARDKG 335
>gi|403256576|ref|XP_003920945.1| PREDICTED: protocadherin beta-8-like [Saimiri boliviensis
boliviensis]
Length = 1087
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ + F + S++GEI + + LDFE SYE +
Sbjct: 755 VIKVSATDADTGVNGEISYSLFQASDEISKTFKVDSLTGEIRLEKQLDFEKLHSYEINIE 814
Query: 60 ATDRG 64
A D G
Sbjct: 815 ARDAG 819
>gi|355749557|gb|EHH53956.1| hypothetical protein EGM_14676 [Macaca fascicularis]
Length = 4981
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G N + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNXXIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNVQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD ++ SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINGKNGTISLLGPLDVQA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDITSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
A DRG
Sbjct: 2231 AADRG 2235
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNG-NMENSFNINHATGEIRSVRPLDREKVSYYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+V G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVVRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKEQFVLMITA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 VDGG 2340
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|297293336|ref|XP_002804232.1| PREDICTED: protocadherin Fat 4-like isoform 1 [Macaca mulatta]
Length = 4981
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNVQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD ++ SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINGKNGTISLLGPLDVQA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDITSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
A DRG
Sbjct: 2231 AADRG 2235
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVVDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNG-NMENSFNINHATGEIRSVRPLDREKVSYYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+V G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVVRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKEQFVLMITA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 VDGG 2340
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|355687592|gb|EHH26176.1| hypothetical protein EGK_16078 [Macaca mulatta]
Length = 4981
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ ++ATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIIATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD ++ SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINGKNGTISLLGPLDVQA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDITSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
A DRG
Sbjct: 2231 AADRG 2235
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVVDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNG-NMENSFNINHATGEIRSVRPLDREKVSYYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+V G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVVRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKEQFVLMITA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 VDGG 2340
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
porcellus]
Length = 4819
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F+M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FHMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 VDRG 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G+N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGLNGTVRYSI--SAGDRSRFQINAQSGVISTRIALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGKNGLIHYSVIKG-NEERQFAIDSTSGQVTLIGKLDYEATPTYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ S F + VSG + LD E ++ Y V+A
Sbjct: 602 LLVLGATDGDLGDNGTVRFSLQETESDQRLFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYAIVQQMPRGNHFSIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D G N V Y + + + F + SV+G I +A+ LD E ++Y V A
Sbjct: 2173 ILQVFAADGDEGTNGQVRYGIVDG-NTNQEFRIDSVTGAITVAKPLDREKIATYLLTVQA 2231
Query: 61 TDRG 64
DRG
Sbjct: 2232 ADRG 2235
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFSINEKNGNISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + ++ N F + +GEI + LD E S Y + +
Sbjct: 2689 ILTVSAVDKDSGPNGQLDYEIVNG-NKENSFSINHATGEIRSIRPLDREKVSHYMLTIKS 2747
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2748 SDKGSPSQ 2755
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTISE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLLVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+++Y++ S+ F + +G+I + LD E++ +Y VV+
Sbjct: 2383 VLLVNASDADASTNAVISYSIIGGNSQ---FTINPSTGQIITSALLDRETKDNYTLIVVS 2439
Query: 61 TDRG 64
+D G
Sbjct: 2440 SDAG 2443
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVIARDDDQGSNSKLSYVL--LGGNEDQAFTLSASGELRVTQSLDRETKEHFVLVITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N +V Y++ + F + S +G + +A+ LD+E +E + ATD
Sbjct: 3113 VSARDRDAAMNGLVRYSISAG-NEEGIFAINSSTGVLVLAKALDYELCQKHEITIRATDG 3171
Query: 64 G 64
G
Sbjct: 3172 G 3172
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ Y++ S S + F + +G I LDFE++ SY V A
Sbjct: 3215 VIHLNATDVDSGTNAVIAYSIQSSDS--DLFVIDPNTGIITTQGFLDFETKQSYHLTVKA 3272
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ ++G + + LD+E++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPITGVFNLTRILDYETQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
>gi|443731666|gb|ELU16708.1| hypothetical protein CAPTEDRAFT_199171 [Capitella teleta]
Length = 1979
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+DPD G V+Y + S+ F + + +GE+ +AQDLD+E+ Y+ ++A
Sbjct: 248 VFKVSATDPDNGEAGFVSYNIT---SKDGLFSINTATGEVTLAQDLDYETEKFYQLEIIA 304
Query: 61 TD 62
D
Sbjct: 305 FD 306
>gi|321476878|gb|EFX87838.1| hypothetical protein DAPPUDRAFT_311854 [Daphnia pulex]
Length = 3133
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
R+ A+D D G NA++ Y+L ++ HF + S+SG++ + Q LDFE+ SY + A D
Sbjct: 542 RIRATDADVGPNAVLRYSLIGGNTQ-GHFVIDSLSGDVAVVQPLDFETVRSYRLVIRAQD 600
Query: 63 RGKETQ 68
G ++
Sbjct: 601 GGNPSR 606
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G N V Y L ++ + + F + + SG + + LD E + Y+ V A
Sbjct: 955 VLQVTATDADQGFNGRVRYVLLDADTNDSPFTLDATSGILRTNKLLDRELVAKYDLLVQA 1014
Query: 61 TDRG 64
DRG
Sbjct: 1015 IDRG 1018
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D G NA + Y G S F ++ +G I + LD E S Y + A
Sbjct: 851 VLIVAASDGDVGDNARITY--GLSGELVPEFSIQPATGAIITTKQLDRERTSGYLLTITA 908
Query: 61 TDRGK 65
D G
Sbjct: 909 RDNGN 913
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D G NA V+Y++ F + + +G I LD E+ Y + A
Sbjct: 430 VLTVRAKDQDAGANADVHYSIVNPFGANEAFRIDAKTGVISTRLALDRETNGQYNLTIQA 489
Query: 61 TDRG 64
D+G
Sbjct: 490 VDQG 493
>gi|402870407|ref|XP_003899216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Papio anubis]
Length = 4928
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNTQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGTPPQ 669
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD ++ SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGTISLLGPLDVQA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDITSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
A DRG
Sbjct: 2231 AADRG 2235
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSYYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+V G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVVRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNTFTL-SASGELGVTQSLDRETKEQFVLMITA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 IDGG 2340
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|241811212|ref|XP_002414573.1| cadherin-repeats domain-containing protein [Ixodes scapularis]
gi|215508784|gb|EEC18238.1| cadherin-repeats domain-containing protein [Ixodes scapularis]
Length = 2790
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A DPD G N +V Y LG N FY+ S G + LDFE + Y V+A D
Sbjct: 2247 QIRAFDPDTGENGLVFYKLGGG--HDNKFYIDSKDGTVWTLSKLDFEKQEFYNMTVIAYD 2304
Query: 63 RGK 65
+GK
Sbjct: 2305 QGK 2307
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V ASDPD G V Y + + R F + S +G+I + LD+E E V A
Sbjct: 1200 LVQVHASDPDEGSAGKVVYRIARATKRET-FRIDSQTGKITLVSPLDYEQIKHLEVFVEA 1258
Query: 61 TDRGKETQ 68
D E Q
Sbjct: 1259 RDDANEPQ 1266
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G N + + E + F++ +V+G + + +LD+E+ ++EF V+A D G
Sbjct: 691 ARDIDAGPNGQIVRFMTEGAE--DKFFVNNVTGALTLISELDYETADTHEFVVLAMDGG 747
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 31 FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
F + +G++C +Q LD E R SYEF V A+D
Sbjct: 1023 FTVNGRTGDVCTSQVLDRERRDSYEFAVAASD 1054
>gi|51593710|gb|AAH80863.1| Pcdha7 protein [Mus musculus]
Length = 946
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D GVN V Y+ S + F+M +VSGEI + +DFE +Y+ P+
Sbjct: 261 VIKVNASDLDEGVNGDVMYSFSSDVSSDIKSKFHMDTVSGEITVIGIIDFEESKAYKIPL 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 EARDKG 326
>gi|426350342|ref|XP_004042736.1| PREDICTED: protocadherin gamma-A8 [Gorilla gorilla gorilla]
Length = 820
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA++LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKNLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
>gi|348514379|ref|XP_003444718.1| PREDICTED: protocadherin Fat 4-like [Oreochromis niloticus]
Length = 1739
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V+ASD D G N +V+YT ++ F + S SG+I + ++DFE YE V+A D
Sbjct: 268 VNASDADSGSNGLVSYTFSNVKGKSAEKFEIDSSSGKITVVDNIDFEKDKKYEIRVIAKD 327
Query: 63 RG 64
+G
Sbjct: 328 QG 329
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ VSASD D G N ++YT+ S + F + +GEI + + DFE + Y+ V
Sbjct: 1360 LITVSASDLDDGSNGKISYTILNSVDDASETFDVNRETGEIKLVGNTDFEKKRQYQIHVQ 1419
Query: 60 ATDRG 64
A+D G
Sbjct: 1420 ASDEG 1424
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V+ASD D G++ V Y++ +P F + SG + +LD+E +E V A+D
Sbjct: 563 VTASDADEGLHGQVRYSISNAPKGALELFNIDEKSGMFTLVGELDYEKFRHFEIDVQASD 622
Query: 63 RG 64
G
Sbjct: 623 EG 624
>gi|23956046|ref|NP_034087.1| protocadherin alpha-7 precursor [Mus musculus]
gi|13876268|gb|AAK26054.1| protocadherin alpha 7 [Mus musculus]
Length = 937
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D GVN V Y+ S + F+M +VSGEI + +DFE +Y+ P+
Sbjct: 261 VIKVNASDLDEGVNGDVMYSFSSDVSSDIKSKFHMDTVSGEITVIGIIDFEESKAYKIPL 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 EARDKG 326
>gi|410913769|ref|XP_003970361.1| PREDICTED: protocadherin gamma-C5-like [Takifugu rubripes]
Length = 837
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ V A+D D G N + Y+LG PS + F++ +V+G++ + + LD+E+++SY V
Sbjct: 258 VITVKATDIDEGPNGEIEYSLGVHTPPSVLSIFHIDAVTGDVSLKKQLDYETQTSYRIDV 317
Query: 59 VATDRG 64
A D+G
Sbjct: 318 SAKDKG 323
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G NA ++Y++ +S S +++ Y+ S +G I D+E ++
Sbjct: 471 LYSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQI 530
Query: 57 PVVATDRG 64
V A D+G
Sbjct: 531 RVQAKDQG 538
>gi|326435630|gb|EGD81200.1| tyrosine phosphatase [Salpingoeca sp. ATCC 50818]
Length = 8158
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+ASDPD G+N + Y L + S N F + + +GE+ +A LDFE SY F V+A
Sbjct: 1711 LVTVAASDPDTGINDPLTYDLYITGSH-NPFAINATTGEVTLAAPLDFEQTPSYSFRVLA 1769
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+ASD D G+NA + YTL E F + SGE+ ++ LD E+R SY V A
Sbjct: 4762 VVVVAASDDDAGLNAQLTYTLDED--EGGLFVIDGSSGEVFASRPLDRETRESYVLVVRA 4819
Query: 61 TDRGKE 66
TD G E
Sbjct: 4820 TDNGSE 4825
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH---FYMKSVSGEICIAQDLDFESRSSYEFP 57
++ V+A+D D G N+ V Y L R+ H F + ++SG + + + LD E+R Y
Sbjct: 5420 LIVVTATDADEGRNSDVTYAL-----RSTHNDTFALDALSGRLRVLKPLDRETRDRYALT 5474
Query: 58 VVATDRGKETQ 68
+VATDRG E Q
Sbjct: 5475 IVATDRGVEQQ 5485
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSR----TNHFYMKSVSGEICIAQDLDFESRSS 53
++RV A+D D NA + YTL G + S F + + SG I +A+ LD E++++
Sbjct: 5201 VVRVRATDADLADNARITYTLLGAGTTNSTGSAVVGAFEIDASSGVISVARPLDRETQAA 5260
Query: 54 YEFPVVATDRGKE 66
YE VVA D G E
Sbjct: 5261 YELTVVAVDGGVE 5273
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+A+D D NA + YT+ S S F + +VSGE+ +A LD E + Y F VV
Sbjct: 4295 LVTVAATDGDIDDNARITYTIATASGSLQVPFAVDAVSGEVTVAGALDREQQELYVFDVV 4354
Query: 60 ATD 62
ATD
Sbjct: 4355 ATD 4357
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV +D D GVN +V++ L R + F + VSG + Q LD E ++ Y V+A D
Sbjct: 6421 RVQVTDADSGVNELVSFML--VGGRADLFSVNPVSGVVTTLQPLDREVQAEYALTVLALD 6478
Query: 63 RGK 65
+G
Sbjct: 6479 QGS 6481
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+LRVS++D D G NA V YTL S F + +GE+ LDFE ++
Sbjct: 2848 VLRVSSTDEDVGTNAQVEYTLRAANEVSAPEPLAFTIGRFTGEVTPVGALDFEMHQTHTL 2907
Query: 57 PVVATD-RGKE 66
VVA++ G+E
Sbjct: 2908 VVVASNPDGRE 2918
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++V+A D D G N V Y + + ++ F + +G + +A+ LDFES SY + A+
Sbjct: 2530 VQVAARDADLGGNGTVAYAIVAGNTNSD-FAVDPTTGVVSVARRLDFESVVSYTLTMRAS 2588
Query: 62 DRG 64
D+G
Sbjct: 2589 DQG 2591
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEI-CIAQDLDFESRSSYEFPVVATDRGKE 66
DPD G+N +V + T+ F++ + +GE+ + DLD E+ +YE VVA DR +
Sbjct: 4662 DPDEGLNGVVRLF---QTTATSVFFVNTFTGEVRLLVSDLDRETTDTYEVTVVAEDRAAD 4718
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V SD D G NA V L + + + S +G I LD ES+++Y F VVA
Sbjct: 3074 VLSVEVSDADSGNNARVALALAGTDA---SVFAVSPAGVITTTAPLDRESKAAYSFEVVA 3130
Query: 61 TD 62
TD
Sbjct: 3131 TD 3132
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A D D G N V + + + + F + + +G I ++ LD E +Y F VVATD
Sbjct: 1966 RVYAPDADAGDNGAVAFAIDNTAALL-PFVIDAQTGVISVSSALDREDVGAYTFVVVATD 2024
Query: 63 RGK 65
+
Sbjct: 2025 QAS 2027
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A D D NA++ Y+L S F++ +GEI + D E++ +Y F + A D
Sbjct: 4192 VVAQDRDSDANAIIAYSLSGSGDEA-LFWVNGSTGEIFATAEFDRETKDAYTFTITARD 4249
>gi|328790119|ref|XP_624967.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog
isoform 2, partial [Apis mellifera]
Length = 1065
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
A+DPD G V Y L ++ +F + VSG I I Q LDFE R + +VA DRG+
Sbjct: 926 ATDPDEGGGGDVEYFLSDAMESEGYFKVDKVSGTIRITQSLDFEERQMHTLTIVARDRGE 985
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A D D G N + Y+ E T+ F + VSG I + + L + R+ +E V+A
Sbjct: 119 ILRVIAEDADLGRNGEIYYSFAEE---TDQFAVHPVSGVITLTRPLRYTERAIHELVVLA 175
Query: 61 TDRG 64
DRG
Sbjct: 176 KDRG 179
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R +A+D D G NA V Y+L + TN F + V+G + + LD E + YE + A
Sbjct: 813 VWRANATDADLGENARVTYSL---VTETNDFRVDPVTGVLTVFGRLDRERQEVYELRIRA 869
Query: 61 TDRG 64
D G
Sbjct: 870 QDNG 873
>gi|126290855|ref|XP_001377224.1| PREDICTED: protocadherin alpha-4 [Monodelphis domestica]
Length = 799
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++ASD D G+N + Y+ SP+ +F++ V+GEI I ++DFE +EF V A
Sbjct: 263 KMNASDLDEGLNGEIFYSFTSDVSPNVQKNFHLDQVNGEIKIKGNIDFEETKLFEFQVEA 322
Query: 61 TDRG 64
TD+G
Sbjct: 323 TDKG 326
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+ V+ASDPD NA+V+Y+L G P +++ + S SG++ Q LD E +
Sbjct: 474 IFTVTASDPDAEENALVSYSLVERLVGVRP-LSSYVSVHSESGKVYALQPLDHEELELLQ 532
Query: 56 FPVVATDRG 64
F V A D G
Sbjct: 533 FQVSAQDSG 541
>gi|338713124|ref|XP_001917610.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Equus
caballus]
Length = 4351
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+R +Y F V
Sbjct: 2818 VIQVTANDQDTGNDGQVSYRLPVDPGSNIHELFAIDSETGWITTLQELDCETRQTYRFYV 2877
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2878 VAYDHGRTIQ 2887
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D VN+ + Y+L ++ HF + GE+ +A+ LD+E SSY V A
Sbjct: 3342 VLTVSATDEDGPVNSAITYSLVGG-NQLGHFTIHPKKGELKVAKALDWEQTSSYSLRVRA 3400
Query: 61 TDRGK 65
TD G+
Sbjct: 3401 TDNGR 3405
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN V Y E +F M G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDQDLGVNGAVTYAFAED---YTYFRMDPYLGDISLRKPFDYQALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ A D D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLAFDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A DRG
Sbjct: 2351 AMDRG 2355
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A DPD G V YTL + T F++ +G + + ++LDFE R+ Y + +D
Sbjct: 947 LDAYDPDLGPAGEVQYTLLDDARGT--FHVDPSTGVLSLEKELDFERRAGYNLSLWVSDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF +++ +G I + + L +++ E V A+D
Sbjct: 3137 VLARDPDQGTNAQVVYSLTDSAE--GHFSIEATTGVIRLEKPLQVRPQAAXELTVRASDL 3194
Query: 64 G 64
G
Sbjct: 3195 G 3195
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y +R+ F + SG + +A + R YE V+A D
Sbjct: 169 KVTATDADLGQNAEFYYAFN---TRSEMFAIHPTSGVVTLAGKFNVTWRGKYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +GE+ LD E + Y A
Sbjct: 3032 ILKVSATDLDSDTNAQITYSL-HGPG-ADEFKLDPHTGELTTLTALDREKKDVYSLVAKA 3089
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3090 TDGGGQS 3096
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ S Y V
Sbjct: 734 LARLAATDPDTGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATSFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|149017275|gb|EDL76326.1| rCG49535 [Rattus norvegicus]
Length = 649
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+L S T F + + SGEI +LD+E ++SYE +
Sbjct: 127 VIKLNASDADEGANSEIVYSLSSDVSSTTRTKFQIDANSGEIRTTGELDYEEKTSYEIQI 186
Query: 59 VATDRG 64
+A+D+G
Sbjct: 187 IASDKG 192
>gi|345324502|ref|XP_003430824.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like
[Ornithorhynchus anatinus]
Length = 4517
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+++V A DPD G N V Y L + P T F + S SG I +DLD E+ + F
Sbjct: 2829 LIQVKAEDPDWGANGQVTYALYSDTDLPGVTQAFGIDSNSGWISTLRDLDHEADPMFTFA 2888
Query: 58 VVATDRGK 65
VVA+D G+
Sbjct: 2889 VVASDLGE 2896
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+DPD GVN V Y+L +S + +F + SG I + Q LD E +SSY V A
Sbjct: 3146 LTRVQATDPDVGVNRKVVYSLADSAN--GYFSIDRSSGIIILEQPLDREVQSSYNISVKA 3203
Query: 61 TDR 63
+D+
Sbjct: 3204 SDQ 3206
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA DPD G N ++Y+L S N F++ SGE+ LD E Y V A
Sbjct: 3044 ILKISAKDPDVGSNGDISYSL--YGSGNNKFFLDPESGELKTLALLDREKIPVYNLIVRA 3101
Query: 61 TDRG 64
TD G
Sbjct: 3102 TDGG 3105
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + ++ + T++F++ S SG I A+ LD ES V
Sbjct: 2302 VLQVVASDADSESNRLVQYQIVQDTFNSTDYFHIDSSSGLILTARLLDHESVQRSTLKVR 2361
Query: 60 ATDRG 64
ATD G
Sbjct: 2362 ATDSG 2366
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V Y+L F + SG I + ++LD+E + Y V A D+G+
Sbjct: 958 DPDLGLGGQVRYSLVND--YNGRFEIDKASGAIRLNRELDYEKQQFYNLTVRAKDKGR 1013
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +V+A+D D G N Y ++ + F + SG I ++ L+F+ ++ Y+ V+A
Sbjct: 173 IAQVTATDADIGSNGEFYYYFK---NKVDLFSVHPTSGIISLSGRLNFDEKNRYDLEVLA 229
Query: 61 TDRG 64
DRG
Sbjct: 230 VDRG 233
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEFPVV 59
++ VSASD D G N + Y++ F + +G I +++LDFES SY F V
Sbjct: 487 IVAVSASDRDKGENGYITYSIASL--NVLPFSINQFTGVISTSEELDFESAPESYRFFVR 544
Query: 60 ATDRG 64
A+D G
Sbjct: 545 ASDWG 549
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + V Y++ + S F + +G I A LD E+ SY V A
Sbjct: 1058 VLQVTARDEDSGRDGEVQYSIRDG-SGLGRFNIDEETGVIYTADVLDRETTGSYWLTVYA 1116
Query: 61 TDRG 64
DRG
Sbjct: 1117 ADRG 1120
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+ D G NA + Y + S + F + S +GEI + ++LD+E + V A
Sbjct: 3251 VLAVFATSKDIGTNAEITYLI-RSGNERGKFRINSRTGEISVIEELDYELCKDFYLVVEA 3309
Query: 61 TDRG 64
D G
Sbjct: 3310 ADGG 3313
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA + YT+ E+ + N F ++ + G I ++++ D + + V
Sbjct: 1581 VLQVTALDKDKGENAELIYTI-EAGNTGNTFKIEPILGIITLSKEPDVTAMGQFVLSVKV 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDQG 1643
>gi|149421338|ref|XP_001507542.1| PREDICTED: protocadherin gamma-A10, partial [Ornithorhynchus
anatinus]
Length = 769
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L ++A+DPD GVN+ V Y+L + F++ +SGEI I + LD+E SYE V
Sbjct: 218 ILTLNATDPDEGVNSEVTYSLRTKNEKFLKLFHLNPLSGEISILKGLDYEESGSYEVEVQ 277
Query: 60 ATD 62
A D
Sbjct: 278 AKD 280
>gi|3253081|dbj|BAA29049.1| Cadherin-related neural recepter 4 [Mus musculus]
Length = 901
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D GVN V Y+ S + F+M +VSGEI + +DFE +Y+ P+
Sbjct: 225 VIKVNASDLDEGVNGDVMYSFSSDVSSDIKSKFHMDTVSGEITVIGIIDFEESKAYKIPL 284
Query: 59 VATDRG 64
A D+G
Sbjct: 285 EARDKG 290
>gi|363738855|ref|XP_003642081.1| PREDICTED: protocadherin beta-4-like [Gallus gallus]
Length = 1044
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D GVN ++Y +S R + F + S +GEI IA+ LDFE+ +E V
Sbjct: 488 VLRVVANDADEGVNGDISYQFSQSVGHRHSLFTINSKTGEIGIAKPLDFETEKKHELTVQ 547
Query: 60 ATDRG 64
A D G
Sbjct: 548 AIDGG 552
>gi|195437460|ref|XP_002066658.1| GK24450 [Drosophila willistoni]
gi|194162743|gb|EDW77644.1| GK24450 [Drosophila willistoni]
Length = 5118
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV++SD D G NA +YT E+P N F ++ SG I +A LD E + Y VVA
Sbjct: 2913 VIRVTSSDLDLGANANASYTFSENPG--NKFKIEPQSGNITVAGHLDREQQDEYILKVVA 2970
Query: 61 TD 62
+D
Sbjct: 2971 SD 2972
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R ASD D G+N+ V +++ + +R + F++ S+SG + + + LD+E + Y + A
Sbjct: 1388 LMRFRASDADQGLNSQVVFSI-TAGNRRDTFHIDSISGSLYLHKSLDYEDITRYSLNITA 1446
Query: 61 TDRG 64
+D G
Sbjct: 1447 SDCG 1450
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
A+D D G N V+Y L + R F + S++G++ LD E+ ++YE V+A D+
Sbjct: 634 ATDHDQGTNGSVSYQLAPNMERLYPQQFAIDSITGQLTTRHTLDRETMANYEILVIARDQ 693
Query: 64 G 64
G
Sbjct: 694 G 694
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE---SPSRTN---HFYMKSVSGEICIAQDLDFESRSSY 54
++ V+A DPD +N V Y + + + RT HF + + +G I +++D ES ++
Sbjct: 1493 IVTVTADDPDSELNGKVTYAISKQEPTEERTGGGRHFGINTETGVIYTLREIDRESIDTF 1552
Query: 55 EFPVVATDRGKETQ 68
VVATDR Q
Sbjct: 1553 RLTVVATDRALPPQ 1566
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
++A+D D GVNA ++Y + S + F M S +G I ++ LD E + S E + A D
Sbjct: 526 IAATDEDTGVNAQIHYEI-LSGNELKWFTMDSATGLIVTSEPLDREVQDSVELSISARDG 584
Query: 64 G 64
G
Sbjct: 585 G 585
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + D D G+N V Y+L S + HF + S +G++ +A+ LD ES+ + +VA
Sbjct: 1282 IIHIFTQDADEGLNGDVYYSLF-SGNEGGHFNLDSATGQLSLARHLDRESQDLHVLTIVA 1340
Query: 61 TD 62
D
Sbjct: 1341 RD 1342
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCG-VNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A D D +N+ V Y L E S + F + + +GEI + + LD ES+S Y +V
Sbjct: 2394 VLTVKAYDADTPPLNSQVRYFLKEGNS--DLFRINASTGEISLLKPLDRESQSEYILTLV 2451
Query: 60 ATDRG 64
A D G
Sbjct: 2452 AMDTG 2456
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G N ++ YT+ + N F + S +G I + LD E R SY V A
Sbjct: 2027 VVTVSAKDIDSGNNGLIEYTITAGDDK-NEFDISS-NGTIRTRRQLDREQRGSYTLTVTA 2084
Query: 61 TD 62
D
Sbjct: 2085 RD 2086
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D G N + Y++ + + + F + +G + +A++L++E ++ Y V A
Sbjct: 2286 VLQVSATDVDEGANGRIRYSI-LTGDQNHDFSIGEDTGVVRVAKNLNYERKARYTLTVRA 2344
Query: 61 TD 62
D
Sbjct: 2345 ED 2346
>gi|306922625|gb|ADN07503.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog)
[Microtus ochrogaster]
Length = 3310
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 559 VLRVTATDQDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 617
Query: 61 TDRGK 65
D G+
Sbjct: 618 QDAGR 622
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1083 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1140
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 875 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 931
Query: 64 G 64
G
Sbjct: 932 G 932
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 975 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1034
Query: 61 TDRG 64
DRG
Sbjct: 1035 VDRG 1038
>gi|119514247|gb|ABL75910.1| protocadherin 2G35 [Takifugu rubripes]
Length = 960
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ V A+D D G N + Y+LG PS + F++ +V+G++ + + LD+E+++SY V
Sbjct: 258 VITVKATDIDEGPNGEIEYSLGVHTPPSVLSIFHIDAVTGDVSLKKQLDYETQTSYRIDV 317
Query: 59 VATDRG 64
A D+G
Sbjct: 318 SAKDKG 323
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G NA ++Y++ +S S +++ Y+ S +G I D+E ++
Sbjct: 471 LYSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQI 530
Query: 57 PVVATDRG 64
V A D+G
Sbjct: 531 RVQAKDQG 538
>gi|332234767|ref|XP_003266575.1| PREDICTED: protocadherin gamma-B2 [Nomascus leucogenys]
Length = 824
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D G+NA + Y+ + HF+ + +GEI DLDFE SSY +
Sbjct: 274 VLQVTATDRDEGINAEITYSFHNVDEQVKHFFHLNEKTGEITTKDDLDFELASSYTLSIE 333
Query: 60 ATDRG 64
A D G
Sbjct: 334 AKDPG 338
>gi|51092279|ref|NP_957695.1| protocadherin alpha-9 precursor [Mus musculus]
gi|13876270|gb|AAK26055.1| protocadherin alpha 8 [Mus musculus]
gi|187952359|gb|AAI39425.1| Protocadherin alpha 8 [Mus musculus]
gi|223460050|gb|AAI39427.1| Protocadherin alpha 8 [Mus musculus]
Length = 946
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D GVN V Y+ S + F+M +VSGEI + +DFE +Y+ P+
Sbjct: 261 VIKVNASDLDEGVNGDVMYSFSSDVSSDIKSKFHMDTVSGEITVIGIIDFEESKAYKIPL 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 EARDKG 326
>gi|395516289|ref|XP_003762323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Sarcophilus harrisii]
Length = 3975
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D NA+V+Y + SR HF + S++GEI + LDFE Y + A
Sbjct: 410 VLRVTATDLDKDTNALVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEVEREYALRIRA 468
Query: 61 TDRGK 65
D G+
Sbjct: 469 QDSGR 473
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A+D D NA + Y + P+ F + SG I + +D E + +YE V A
Sbjct: 302 ILQLRATDGDAAANANIRYRFVDPPAAQAVFEIDPRSGLITTSGRVDREQKENYELAVEA 361
Query: 61 TDRGKE 66
+D+G E
Sbjct: 362 SDQGGE 367
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD ES YE A
Sbjct: 826 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRESVPVYELTAYA 885
Query: 61 TDRG 64
DRG
Sbjct: 886 VDRG 889
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E R Y V AT
Sbjct: 934 QITAIDPDEGPNAQIMYQIVEG-NIPELFQMDIFSGELTTLIDLDYEMRPEYVIVVQAT 991
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G NA + Y L ++ F + SG I + +LD+E + +Y + A D
Sbjct: 726 ISATDDDVGENARITYLLEDN---LPQFRIDVDSGAITLQAELDYEDQVTYTLAITAKDN 782
Query: 64 G 64
G
Sbjct: 783 G 783
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L V+A DPD G ++Y++ + + F + + SG I A+ LD ES + F V
Sbjct: 194 VLSVAAQDPDAGEAGRLSYSMAALMNSRSLDLFRIDAASGLISTAEPLDRESMDLHYFRV 253
Query: 59 VATDRG 64
A D G
Sbjct: 254 TALDHG 259
>gi|326673357|ref|XP_003199855.1| PREDICTED: protocadherin alpha-7-like [Danio rerio]
Length = 797
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G+N V Y+ G+S + F + +++GEI + LD+E + SYE V
Sbjct: 263 VIQVNATDVDEGLNGEVVYSFGQSVNSKVRKLFDINTITGEITVQGHLDYEDKDSYEIDV 322
Query: 59 VATDRG 64
A+D+G
Sbjct: 323 QASDKG 328
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G NA+V+Y + S N + S +GEI + DFE+ +++F
Sbjct: 477 LFSVSASDKDIGENAIVSYQILRESSEENKITSFININSENGEIYALKSFDFETSKTFQF 536
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 537 HILATDSG 544
>gi|260787291|ref|XP_002588687.1| hypothetical protein BRAFLDRAFT_248168 [Branchiostoma floridae]
gi|229273855|gb|EEN44698.1| hypothetical protein BRAFLDRAFT_248168 [Branchiostoma floridae]
Length = 292
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A D D G+ +V+Y++ ES N F + +V G + +A LD+E ++SY+ VVA
Sbjct: 129 VVTVTAEDRDLGLAGIVHYSIQESEGSGN-FSIDTVRGVVTLATTLDYEKKTSYQLKVVA 187
Query: 61 TDRG 64
D G
Sbjct: 188 RDEG 191
>gi|306922617|gb|ADN07496.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog),
5 prime [Microtus ochrogaster]
Length = 3301
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 559 VLRVTATDQDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 617
Query: 61 TDRGK 65
D G+
Sbjct: 618 QDAGR 622
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1083 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1140
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 875 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 931
Query: 64 G 64
G
Sbjct: 932 G 932
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 975 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1034
Query: 61 TDRG 64
DRG
Sbjct: 1035 VDRG 1038
>gi|449276788|gb|EMC85187.1| Cadherin EGF LAG seven-pass G-type receptor 3, partial [Columba
livia]
Length = 688
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L +A+D D G NA+++YT+ GE T+ F++ +SG I Q LD+ESRS Y F +
Sbjct: 592 ILSAAATDEDIGYNAIIHYTIIGE----TSLFHVGELSGNITTLQPLDYESRSQYTFILK 647
Query: 60 ATDRG 64
A + G
Sbjct: 648 AFNPG 652
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L VSA+D D G NA+V Y + + P+ + F + +G++ ++Q LD+E+ +E V
Sbjct: 172 LLTVSATDLDAGANALVKYRIVSQQPPTSSPVFLVDLTTGQLSLSQQLDYETTKQFEVEV 231
Query: 59 VATDRGK 65
A+D G+
Sbjct: 232 EASDGGQ 238
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
SA+D D G NA+++Y+L + + F++ S +GE+ + LD E SYE ++A D G
Sbjct: 493 SATDLDIGDNALISYSLQDDFAGI--FHISSSTGELMTKKPLDREMVDSYELKIIAADSG 550
Query: 65 KETQ 68
+ +Q
Sbjct: 551 RPSQ 554
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RVSA+D D G N +V YTL R + SG I + ++LD E + Y V+A+D
Sbjct: 72 RVSATDADAGFNGVVVYTLKGGEGRMD----IDTSGLISLEKELDREKQGFYNLTVIASD 127
Query: 63 RGK 65
+G+
Sbjct: 128 QGQ 130
>gi|26335717|dbj|BAC31559.1| unnamed protein product [Mus musculus]
Length = 794
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+VSA D D G N V+Y+L S + F + ++SGE+ + + LDFE+ SYE + AT
Sbjct: 261 KVSAKDLDTGTNGEVSYSLFHSSQEMSKTFELNALSGEVRLIKTLDFETTPSYELDIEAT 320
Query: 62 DRG 64
D G
Sbjct: 321 DGG 323
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P++ + S+ +G++ + LD+E+ ++EF
Sbjct: 471 ISATDSDSGSNAHITYSL--LPAQEPQLALNSLISINADNGQLFALRALDYEALQAFEFH 528
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 529 VSATDRG 535
>gi|19924085|ref|NP_612553.1| protocadherin Fat 3 precursor [Rattus norvegicus]
gi|81867062|sp|Q8R508.1|FAT3_RAT RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
homolog 3; Flags: Precursor
gi|19773543|dbj|BAB86869.1| fat3 [Rattus norvegicus]
Length = 4555
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S S F + S SG I + Q LD E +SSY V A
Sbjct: 3149 LTRVQAVDPDVGINRKVVYSLEDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRA 3206
Query: 61 TDR 63
TD+
Sbjct: 3207 TDQ 3209
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y++ + T+ F + S +G + IA LD ES+++Y + A
Sbjct: 849 IIQVEARDKDLGSNGEVTYSV---LTDTHQFVINSSTGIVYIADQLDRESKANYSLKIEA 905
Query: 61 TDRGKETQ 68
D+ + Q
Sbjct: 906 RDKAESGQ 913
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ +SY V A
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVITAADILDRETTASYWLTVYA 1119
Query: 61 TDRG 64
TDRG
Sbjct: 1120 TDRG 1123
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+
Sbjct: 957 LETQDPDLGLGGQVRYSLVND--YNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDK 1014
Query: 64 GK 65
G+
Sbjct: 1015 GR 1016
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V A D D G N V Y+L S S F + S +G I +DLD E+ ++ F
Sbjct: 2832 LAQVRAIDTDWGANGQVTYSL-HSDSHLEKVMEAFNIDSNTGWISTLKDLDHETDPTFSF 2890
Query: 57 PVVATDRGK 65
VVA+D G+
Sbjct: 2891 FVVASDLGE 2899
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ ++D D G N +V+Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 2305 VLQLVSTDADSGNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVT 2364
Query: 60 ATDRG 64
ATD G
Sbjct: 2365 ATDNG 2369
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNY---TLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y +L P N F +G I ++LDFES +Y F
Sbjct: 490 VLTVSASDKDKGENGYITYSIASLNLLPFAINQF-----TGVISTTEELDFESSPETYRF 544
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 545 IVRASDWG 552
>gi|440902416|gb|ELR53213.1| Protocadherin gamma-B7, partial [Bos grunniens mutus]
Length = 708
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRVSA+D D GVNA + Y+ LG + + + F + S +G I Q LD+E+ Y V
Sbjct: 184 VLRVSATDQDEGVNAEITYSFLGVADTARHVFSLDSATGNIITHQPLDYENVGRYAMVVE 243
Query: 60 ATDRG 64
A DRG
Sbjct: 244 AKDRG 248
>gi|431892567|gb|ELK03000.1| Protocadherin alpha-11 [Pteropus alecto]
Length = 822
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
M++++A+DPD GVN V Y+L P+R F + +GE+ + LD+E + YE V
Sbjct: 265 MIKLNATDPDEGVNGEVTYSLISIKPNRKRLFTIDENNGEVRVNGILDYEENTFYEIEVQ 324
Query: 60 ATDRG 64
A D+G
Sbjct: 325 AKDKG 329
>gi|350581230|ref|XP_003354374.2| PREDICTED: protocadherin beta-15-like [Sus scrofa]
Length = 799
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S ++ F + S+SGE+ + + LDFE+ SSYE +
Sbjct: 261 VVKVSARDLDAGTNGEISYSLFYSSQEISSTFELNSISGEVRLIKKLDFETVSSYELDID 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
V A+D D G NA + Y+L P H + S+ +G++ + LD+E+ +++F
Sbjct: 473 VRATDADAGANAQLTYSL--LPPSDPHLPLASLVAINPDTGQLFALRALDYEALRAFDFQ 530
Query: 58 VVATDRG 64
V A DRG
Sbjct: 531 VRAADRG 537
>gi|148693090|gb|EDL25037.1| mCG142133 [Mus musculus]
Length = 4539
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S S F + S SG I + Q LD E +SSY V A
Sbjct: 3133 LTRVQAMDPDVGINRKVVYSLEDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRA 3190
Query: 61 TDR 63
TD+
Sbjct: 3191 TDQ 3193
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ +SY V A
Sbjct: 1045 VLQVTAHDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVITAADSLDRETTASYWLTVYA 1103
Query: 61 TDRG 64
TDRG
Sbjct: 1104 TDRG 1107
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+
Sbjct: 941 LETQDPDLGLGGQVRYSLVND--YNGRFEVDKASGAIRLSKELDYEKQQFYNLTVRAKDK 998
Query: 64 GK 65
G+
Sbjct: 999 GR 1000
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNY---TLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y +L P N F +G I ++LDFES +Y F
Sbjct: 474 VLTVSASDKDKGENGYITYSIASLNLLPFAINQF-----TGVISTTEELDFESSPETYRF 528
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 529 IVRASDWG 536
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N + Y+L S N F++ SGE+ LD E Y A
Sbjct: 3031 ILKVSAKDADIGSNGDIRYSL--YGSGNNEFFLDPESGELKTLAVLDRERVPVYNLIARA 3088
Query: 61 TDRG 64
TD G
Sbjct: 3089 TDGG 3092
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ ++D D G N +V Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 2289 VLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVT 2348
Query: 60 ATDRG 64
ATD G
Sbjct: 2349 ATDNG 2353
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V A D D G N V Y+L S S F + S +G I +DLD E+ ++ F
Sbjct: 2816 LAQVRAIDMDWGANGQVTYSL-HSDSHLEKVIEAFNIDSNTGWISTLKDLDHETDPAFSF 2874
Query: 57 PVVATDRGK 65
VVA+D G+
Sbjct: 2875 FVVASDLGE 2883
>gi|148728178|ref|NP_444377.3| protocadherin beta 22 precursor [Mus musculus]
gi|13876306|gb|AAK26073.1| protocadherin beta 22 [Mus musculus]
gi|148678202|gb|EDL10149.1| protocadherin beta 22 [Mus musculus]
Length = 794
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+VSA D D G N V+Y+L S + F + ++SGE+ + + LDFE+ SYE + AT
Sbjct: 261 KVSAKDLDTGTNGEVSYSLFHSSQEMSKTFELNALSGEVRLIKTLDFETTPSYELDIEAT 320
Query: 62 DRG 64
D G
Sbjct: 321 DGG 323
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P++ + S+ +G++ + LD+E+ ++EF
Sbjct: 471 ISATDSDSGSNAHITYSL--LPAQEPQLALNSLISINADNGQLFALRALDYEALQAFEFH 528
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 529 VSATDRG 535
>gi|432092385|gb|ELK25000.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Myotis davidii]
Length = 1240
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 59 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 117
Query: 61 TDRGK 65
D G+
Sbjct: 118 QDAGR 122
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+R YE A
Sbjct: 475 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRSVRRLDREARPVYELTAYA 534
Query: 61 TDRG 64
DRG
Sbjct: 535 VDRG 538
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +++A+DPD G NA V Y + E + F M SGE+ DLD+E+R Y V A
Sbjct: 581 VAQITAADPDEGPNAHVMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQA 639
Query: 61 T 61
T
Sbjct: 640 T 640
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L + F + + SG I + LD+E + +Y + A D
Sbjct: 375 ISASDDDVGENARITYLLED---HLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 431
Query: 64 G 64
G
Sbjct: 432 G 432
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y L G +P F + S +G + ++ LD ES Y F V
Sbjct: 165 VIHIQAVDADHGENARLEYALTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYFFGVE 222
Query: 60 ATDRG 64
A D G
Sbjct: 223 ARDHG 227
>gi|426229740|ref|XP_004008944.1| PREDICTED: protocadherin gamma-A2 [Ovis aries]
Length = 804
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G NA V Y L ++P T+ F +KS SGEI I + LD+E +E +
Sbjct: 261 ILTVTATDADEGYNAQVTYFLEKNPEETSEVFELKSSSGEITITKSLDYEDAKFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|124249105|ref|NP_001074283.1| protocadherin Fat 3 precursor [Mus musculus]
Length = 4551
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S S F + S SG I + Q LD E +SSY V A
Sbjct: 3145 LTRVQAMDPDVGINRKVVYSLEDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRA 3202
Query: 61 TDR 63
TD+
Sbjct: 3203 TDQ 3205
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ +SY V A
Sbjct: 1057 VLQVTAHDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVITAADSLDRETTASYWLTVYA 1115
Query: 61 TDRG 64
TDRG
Sbjct: 1116 TDRG 1119
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+
Sbjct: 953 LETQDPDLGLGGQVRYSLVND--YNGRFEVDKASGAIRLSKELDYEKQQFYNLTVRAKDK 1010
Query: 64 GK 65
G+
Sbjct: 1011 GR 1012
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNY---TLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y +L P N F +G I ++LDFES +Y F
Sbjct: 486 VLTVSASDKDKGENGYITYSIASLNLLPFAINQF-----TGVISTTEELDFESSPETYRF 540
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 541 IVRASDWG 548
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N + Y+L S N F++ SGE+ LD E Y A
Sbjct: 3043 ILKVSAKDADIGSNGDIRYSL--YGSGNNEFFLDPESGELKTLAVLDRERVPVYNLIARA 3100
Query: 61 TDRG 64
TD G
Sbjct: 3101 TDGG 3104
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ ++D D G N +V Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 2301 VLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVT 2360
Query: 60 ATDRG 64
ATD G
Sbjct: 2361 ATDNG 2365
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V A D D G N V Y+L S S F + S +G I +DLD E+ ++ F
Sbjct: 2828 LAQVRAIDMDWGANGQVTYSL-HSDSHLEKVIEAFNIDSNTGWISTLKDLDHETDPAFSF 2886
Query: 57 PVVATDRGK 65
VVA+D G+
Sbjct: 2887 FVVASDLGE 2895
>gi|66773316|ref|NP_001019299.1| protocadherin 1 gamma 32 [Danio rerio]
gi|50881558|gb|AAT85359.1| protocadherin cluster 1 gamma 32 [Danio rerio]
Length = 961
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSASDPD G N+ +++++ ES S +++ Y+ SG+I + D+E ++++F
Sbjct: 491 LLSVSASDPDVGENSTISFSILESEALGLSVSSYVYINPNSGQIYAIRKFDYEHLNAFQF 550
Query: 57 PVVATDRGKETQ 68
V DRG +Q
Sbjct: 551 VVQVQDRGTPSQ 562
>gi|405973235|gb|EKC37959.1| Protocadherin Fat 1 [Crassostrea gigas]
Length = 3515
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V+A+D D G+NA + Y L ++ N F + ++G + A+ LDFE Y F V
Sbjct: 1170 VLKVTATDADSGINAEIQYDLSPLDNSRSINIFQINPITGVLRTARLLDFEDTQEYLFHV 1229
Query: 59 VATDRG 64
VATD G
Sbjct: 1230 VATDGG 1235
>gi|14039487|gb|AAK53240.1|AF326315_1 protocadherin-betaV [Mus musculus]
Length = 794
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+VSA D D G N V+Y+L S + F + ++SGE+ + + LDFE+ SYE + AT
Sbjct: 261 KVSAKDLDTGTNGEVSYSLFHSSQEMSKTFELNALSGEVRLIKTLDFETTPSYELDIEAT 320
Query: 62 DRG 64
D G
Sbjct: 321 DGG 323
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P++ + S+ +G++ + LD+E+ ++EF
Sbjct: 471 ISATDSDSGSNAHITYSL--LPAQEPQLALNSLISINADNGQLFALRALDYEALQAFEFH 528
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 529 VSATDRG 535
>gi|14270493|ref|NP_115267.1| protocadherin gamma-B2 isoform 2 precursor [Homo sapiens]
gi|5457084|gb|AAD43778.1|AF152518_1 protocadherin gamma B2 short form protein [Homo sapiens]
gi|75517925|gb|AAI01806.1| Protocadherin gamma subfamily B, 2 [Homo sapiens]
gi|119582343|gb|EAW61939.1| hCG1982215, isoform CRA_r [Homo sapiens]
Length = 811
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D G+NA + Y+ + HF+ + +GEI DLDFE SSY +
Sbjct: 261 VLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
>gi|397517990|ref|XP_003846123.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B2 [Pan
paniscus]
Length = 811
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D G+NA + Y+ + HF+ + +GEI DLDFE SSY +
Sbjct: 261 VLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
>gi|397495187|ref|XP_003818441.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Pan paniscus]
Length = 4186
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 634 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 692
Query: 61 TDRGK 65
D G+
Sbjct: 693 QDAGR 697
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 1050 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1109
Query: 61 TDRG 64
DRG
Sbjct: 1110 VDRG 1113
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1158 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1215
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 950 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 1006
Query: 64 G 64
G
Sbjct: 1007 G 1007
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 740 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 797
Query: 60 ATDRG 64
A D G
Sbjct: 798 ARDHG 802
>gi|53830059|gb|AAU94938.1| anchor protein [Homo sapiens]
Length = 4186
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 634 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 692
Query: 61 TDRGK 65
D G+
Sbjct: 693 QDAGR 697
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 1050 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1109
Query: 61 TDRG 64
DRG
Sbjct: 1110 VDRG 1113
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1158 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1215
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 950 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 1006
Query: 64 G 64
G
Sbjct: 1007 G 1007
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 740 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 797
Query: 60 ATDRG 64
A D G
Sbjct: 798 ARDHG 802
>gi|172046767|sp|Q8BNA6.2|FAT3_MOUSE RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
homolog 3; Flags: Precursor
Length = 4555
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S S F + S SG I + Q LD E +SSY V A
Sbjct: 3149 LTRVQAMDPDVGINRKVVYSLEDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRA 3206
Query: 61 TDR 63
TD+
Sbjct: 3207 TDQ 3209
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ +SY V A
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVITAADSLDRETTASYWLTVYA 1119
Query: 61 TDRG 64
TDRG
Sbjct: 1120 TDRG 1123
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+
Sbjct: 957 LETQDPDLGLGGQVRYSLVND--YNGRFEVDKASGAIRLSKELDYEKQQFYNLTVRAKDK 1014
Query: 64 GK 65
G+
Sbjct: 1015 GR 1016
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE---SPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y++ P N F +G I ++LDFES +Y F
Sbjct: 490 VLTVSASDKDKGENGYITYSIASLNLLPFAINQF-----TGVISTTEELDFESSPETYRF 544
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 545 IVRASDWG 552
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N + Y+L S N F++ SGE+ LD E Y A
Sbjct: 3047 ILKVSAKDADIGSNGDIRYSL--YGSGNNEFFLDPESGELKTLAVLDRERVPVYNLIARA 3104
Query: 61 TDRG 64
TD G
Sbjct: 3105 TDGG 3108
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ ++D D G N +V Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 2305 VLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVT 2364
Query: 60 ATDRG 64
ATD G
Sbjct: 2365 ATDNG 2369
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V A D D G N V Y+L S S F + S +G I +DLD E+ ++ F
Sbjct: 2832 LAQVRAIDMDWGANGQVTYSL-HSDSHLEKVIEAFNIDSNTGWISTLKDLDHETDPAFSF 2890
Query: 57 PVVATDRGK 65
VVA+D G+
Sbjct: 2891 FVVASDLGE 2899
>gi|449496511|ref|XP_002196710.2| PREDICTED: protocadherin Fat 4-like [Taeniopygia guttata]
Length = 2518
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
SA+D D G NA+++Y+L + + T F++ S +G++ + LD E SYE ++ATD G
Sbjct: 1209 SATDLDAGDNALISYSLQDDFAET--FHINSSTGKLMTKKPLDREVMDSYELKIIATDSG 1266
Query: 65 KETQ 68
K Q
Sbjct: 1267 KPPQ 1270
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L ++A+D D G NA V Y + + +T+ F + S +G+ ++Q LD+E+ + +E V
Sbjct: 682 LLTLAATDLDAGANAFVMYRITDQRPQTSSPVFLVNSSTGQFSLSQQLDYETINKFEVQV 741
Query: 59 VATDRGK 65
A+D G+
Sbjct: 742 EASDGGQ 748
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L A+D D G NA+++YT+ GE+ S F++ SG+I Q LD+ES+S Y +
Sbjct: 1308 ILSAVATDADIGYNAIIHYTITGETIS----FHVGEFSGDIATLQPLDYESQSQYMLILK 1363
Query: 60 ATDRGK 65
A + G+
Sbjct: 1364 AFNPGE 1369
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 3 RVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
V+A+D D G NA + Y L G++P Y G I + +D ES+ YE +
Sbjct: 897 HVTATDLDEGENARITYYLSAEDGDNP------YSIQQDGTILVTGSVDRESKDKYELLL 950
Query: 59 VATDRG 64
VA+D G
Sbjct: 951 VASDNG 956
>gi|11128035|ref|NP_061746.1| protocadherin gamma-B2 isoform 1 precursor [Homo sapiens]
gi|37999832|sp|Q9Y5G2.1|PCDGE_HUMAN RecName: Full=Protocadherin gamma-B2; Short=PCDH-gamma-B2; Flags:
Precursor
gi|5456959|gb|AAD43725.1| protocadherin gamma B2 [Homo sapiens]
gi|119582354|gb|EAW61950.1| hCG1982215, isoform CRA_ac [Homo sapiens]
Length = 931
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D G+NA + Y+ + HF+ + +GEI DLDFE SSY +
Sbjct: 261 VLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
>gi|327270405|ref|XP_003219980.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 1545
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A+D D G+NA + Y+ + + + F + S +GEI + +LD+E S YEF V ATD
Sbjct: 960 VRATDLDEGINAEIKYSFQKITKKISQIFLLNSTTGEILLIGNLDYEESSLYEFEVQATD 1019
Query: 63 RG 64
G
Sbjct: 1020 GG 1021
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ + ASDPD G+NA + Y++ S + +++ + + +G I + D+E ++
Sbjct: 1167 LFTIKASDPDVGLNAKITYSIFNSNIQELPISSYISINTETGTIYAQRSFDYEEFREFQL 1226
Query: 57 PVVATDRG 64
V A D G
Sbjct: 1227 QVKAQDGG 1234
>gi|148689370|gb|EDL21317.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_b [Mus
musculus]
Length = 3301
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 555 VLRVTATDKDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVMAPLDFEAEREYALRIRA 613
Query: 61 TDRGK 65
D G+
Sbjct: 614 QDAGR 618
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1079 QITAVDPDDGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 871 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 64 G 64
G
Sbjct: 928 G 928
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 971 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1030
Query: 61 TDRG 64
DRG
Sbjct: 1031 VDRG 1034
>gi|444723716|gb|ELW64355.1| Protocadherin Fat 2 [Tupaia chinensis]
Length = 4521
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S SG I Q+LD E+ ++ F V
Sbjct: 2997 VIQVTANDQDTGRDGQVSYRLSGEPGSNVHELFTIDSKSGWITTLQELDCETHQTHRFYV 3056
Query: 59 VATDRGKETQ 68
VA D G+ TQ
Sbjct: 3057 VAYDHGQPTQ 3066
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + +GE+ +A+ LD+E SSY + A
Sbjct: 3515 ILTVSATDEDGPLNSAITYSLVGG-NQLGHFTVHPKTGELQVAKALDWEQTSSYSLRLRA 3573
Query: 61 TDRGK 65
TD G+
Sbjct: 3574 TDSGQ 3578
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+ES+ + V
Sbjct: 2470 VIQLLASDQDSGKNRDVSYQIVEDGSNVSKFFQINGSTGEMSTVQELDYESQQHFHVKVR 2529
Query: 60 ATDRG 64
A DRG
Sbjct: 2530 AMDRG 2534
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D G NA V+Y+L + S F + ++ G I +AQ LD S + + V A
Sbjct: 1753 LLQVRAADSDRGANAEVHYSLLKGNSE-GFFNINALLGIITVAQKLDQASHAQHTLTVKA 1811
Query: 61 TDRG 64
D+G
Sbjct: 1812 EDQG 1815
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y +R+ F + SG + +A L+ R YE V+A D
Sbjct: 310 KVTATDADLGQNAEFYYAFN---TRSEMFAIHPTSGVVTVAGKLNVTWRGKYELQVLAVD 366
Query: 63 RGKE 66
R ++
Sbjct: 367 RMRK 370
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N ++ Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2268 LFQVSATDEDLGANGVITYAFAED---YIYFRIDPYLGDITLKKPFDYQALNKYRLKVIA 2324
Query: 61 TDRG 64
D G
Sbjct: 2325 QDGG 2328
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P N F + +GE+ LD E + +Y A
Sbjct: 3205 VLKVSATDLDTDTNAQITYSL-HGPG-VNEFKLHPHTGELTTLTALDRERKDTYSLVAKA 3262
Query: 61 TDRG 64
TD G
Sbjct: 3263 TDGG 3266
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L T F + ++G + + ++LDFE ++ Y + A+D
Sbjct: 1087 LDASDPDLGPAGEVRYVLLNDAHGT--FRVDLMTGALSLERELDFEKQAGYNLSLWASDG 1144
Query: 64 GK 65
G+
Sbjct: 1145 GR 1146
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L + + + E V A+D
Sbjct: 3310 VFARDPDQGTNAQVVYSLTDSAE--GHFSIDATTGVIRLEKPLQVKPQVALELTVRASDL 3367
Query: 64 G 64
G
Sbjct: 3368 G 3368
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ S Y +
Sbjct: 874 LARLAATDPDAGFNGKLVYVVADG-NEEGCFDIELETGLLTVAAPLDYETTSFYVLNITV 932
Query: 61 TDRG 64
D G
Sbjct: 933 YDLG 936
>gi|16518999|gb|AAL25099.1|AF427498_1 cadherin EGF LAG seven-pass G-type receptor [Mus musculus]
Length = 3301
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 555 VLRVTATDKDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVMAPLDFEAEREYALRIRA 613
Query: 61 TDRGK 65
D G+
Sbjct: 614 QDAGR 618
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1079 QITAVDPDDGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 871 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 64 G 64
G
Sbjct: 928 G 928
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 971 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1030
Query: 61 TDRG 64
DRG
Sbjct: 1031 VDRG 1034
>gi|363745760|ref|XP_428051.3| PREDICTED: protocadherin beta-4 [Gallus gallus]
Length = 811
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A D D G+N V+Y + +S +++ F + S +GEI + + LDFE+ +E V
Sbjct: 255 VLRVMAMDADVGINGDVSYQIIQSVGQSHSAFAINSTNGEILVREPLDFEASQKHELSVR 314
Query: 60 ATDRG 64
ATD G
Sbjct: 315 ATDGG 319
>gi|297285835|ref|XP_002808368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Macaca mulatta]
Length = 4191
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 635 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 693
Query: 61 TDRGK 65
D G+
Sbjct: 694 QDAGR 698
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 1051 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1110
Query: 61 TDRG 64
DRG
Sbjct: 1111 VDRG 1114
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1159 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1216
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 951 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 1007
Query: 64 G 64
G
Sbjct: 1008 G 1008
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G NA + Y+L S T F + S +G + ++ LD ES Y F V A
Sbjct: 741 VIHIQAVDADHGENARLEYSLTGVASDTP-FVINSATGWVSVSGPLDRESVEHYFFGVEA 799
Query: 61 TDRG 64
D G
Sbjct: 800 RDHG 803
>gi|190339880|gb|AAI63753.1| Protocadherin 1 gamma 32 [Danio rerio]
Length = 961
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSASDPD G N+ +++++ ES S +++ Y+ SG+I + D+E ++++F
Sbjct: 491 LLSVSASDPDVGENSTISFSILESEALGLSVSSYVYINPNSGQIYAIRKFDYEHLNAFQF 550
Query: 57 PVVATDRGKETQ 68
V DRG +Q
Sbjct: 551 VVQVQDRGTPSQ 562
>gi|148689369|gb|EDL21316.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_a [Mus
musculus]
Length = 3302
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 555 VLRVTATDKDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVMAPLDFEAEREYALRIRA 613
Query: 61 TDRGK 65
D G+
Sbjct: 614 QDAGR 618
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1079 QITAVDPDDGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 871 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 64 G 64
G
Sbjct: 928 G 928
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 971 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1030
Query: 61 TDRG 64
DRG
Sbjct: 1031 VDRG 1034
>gi|125719165|ref|NP_536685.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Mus
musculus]
gi|341940343|sp|Q91ZI0.2|CELR3_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; Flags:
Precursor
Length = 3301
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 555 VLRVTATDKDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVMAPLDFEAEREYALRIRA 613
Query: 61 TDRGK 65
D G+
Sbjct: 614 QDAGR 618
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1079 QITAVDPDDGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 871 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 64 G 64
G
Sbjct: 928 G 928
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 971 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1030
Query: 61 TDRG 64
DRG
Sbjct: 1031 VDRG 1034
>gi|54019434|ref|NP_955798.1| protocadherin alpha-2 precursor [Rattus norvegicus]
gi|40645520|dbj|BAD06367.1| cadherin-related neuronal receptor 2 [Rattus norvegicus]
gi|50512326|gb|AAT77558.1| protocadherin alpha 2 [Rattus norvegicus]
Length = 948
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+L S T F + + SGEI +LD+E ++SYE +
Sbjct: 261 VIKLNASDADEGANSEIVYSLSSDVSSTTRTKFQIDANSGEIRTTGELDYEEKTSYEIQI 320
Query: 59 VATDRG 64
+A+D+G
Sbjct: 321 IASDKG 326
>gi|402860228|ref|XP_003894536.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Papio anubis]
Length = 4291
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 739 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 797
Query: 61 TDRGK 65
D G+
Sbjct: 798 QDAGR 802
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 1155 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1214
Query: 61 TDRG 64
DRG
Sbjct: 1215 VDRG 1218
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1263 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1320
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 1055 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 1111
Query: 64 G 64
G
Sbjct: 1112 G 1112
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G NA + Y+L S T F + S +G + ++ LD ES Y F V A
Sbjct: 845 VIHIQAVDADHGENARLEYSLTGVASDTP-FVINSATGWVSVSGPLDRESVEHYFFGVEA 903
Query: 61 TDRG 64
D G
Sbjct: 904 RDHG 907
>gi|149018495|gb|EDL77136.1| cadherin EGF LAG seven-pass G-type receptor 3 [Rattus norvegicus]
Length = 3148
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 555 VLRVTATDKDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVMAPLDFEAEREYALRIRA 613
Query: 61 TDRGK 65
D G+
Sbjct: 614 QDAGR 618
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1079 QITAVDPDDGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 871 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 64 G 64
G
Sbjct: 928 G 928
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 971 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1030
Query: 61 TDRG 64
DRG
Sbjct: 1031 VDRG 1034
>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
Length = 4981
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVNA ++YT+ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGVNADLHYTITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
TDRG
Sbjct: 326 TDRG 329
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G N V Y + + F + SV+G I +A+ LD E+ +Y V A
Sbjct: 2173 IIQVSATDSDEGTNGQVRYGIVGGNTH-QEFRIDSVTGAITVAKTLDRETTPAYTLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDMGPNGTVQYSI--SAGDRSRFQINAKSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I + ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N ++Y + ++ N F + +GEI + LD E S YE V +
Sbjct: 2689 ILTVSATDKDSGPNGQLDYEIVNG-NKENSFTINHATGEIRSIRPLDREKMSHYELTVKS 2747
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2748 SDKGSPSQ 2755
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDMDEGSNGLIHYSILKG-NEERQFAIDRFSGQVTLIGKLDYEATPAYSLLIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D N V ++L E+ S F + VSG + LD E ++ Y V+A
Sbjct: 602 LLVLGATDGDLSDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN V Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IYQAKAMDPDEGVNGRVLYSLKQNPK--NLFAINEQNGNISLLGALDVHA-GSYQLEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3215 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3272
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y + S + F + S +G + +A+ LD+E S +E + ATD
Sbjct: 3113 VSARDRDTAMNGLIRYDI-SSGNEEGIFAINSSTGVLTLAKALDYELCSKHEMTISATDG 3171
Query: 64 G 64
G
Sbjct: 3172 G 3172
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSS--------Y 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2895 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGASNVNINRH 2951
Query: 55 EFPVVATDRGK 65
F V A+DRG
Sbjct: 2952 SFIVTASDRGN 2962
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ + T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTITDG--NTGDAFGIFPDGQLYIKSELDRELQERYVLLVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + + SGE+ + Q LD E+R ++ V A
Sbjct: 2279 ILQVVARDDDQGPNSRLSYVL-LGGNEDNAFAL-TASGELRVIQSLDREARDNFVLVVTA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 ADAG 2340
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2795 RVTTSDEDIGINAISRYSIADT---SLPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 2851
Query: 63 RG 64
G
Sbjct: 2852 SG 2853
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYVVDED-DGDGVFFLNPVTGVFNLTRALDYETQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
Length = 5152
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2240 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVA 2297
Query: 61 TDRGK 65
TD+G+
Sbjct: 2298 TDKGQ 2302
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVNA ++YT+ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1508 VTATDSDSGVNADLHYTITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1564
Query: 62 DRGK 65
D+G+
Sbjct: 1565 DQGR 1568
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 440 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 496
Query: 61 TDRG 64
TDRG
Sbjct: 497 TDRG 500
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G N V Y + + F + SV+G I +A+ LD E+ +Y V A
Sbjct: 2344 IIQVSATDSDEGTNGQVRYGIVGGNTH-QEFRIDSVTGAITVAKTLDRETTPAYTLTVQA 2402
Query: 61 TDRG 64
TDRG
Sbjct: 2403 TDRG 2406
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 882 VSATDPDMGPNGTVQYSI--SAGDRSRFQINAKSGVISTRMALDREEKTAYQLQIVATDG 939
Query: 64 GK 65
G
Sbjct: 940 GN 941
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N ++Y + ++ N F + +GEI + LD E S YE V +
Sbjct: 2860 ILTVSATDKDSGPNGQLDYEIVNG-NKENSFTINHATGEIRSIRPLDREKMSHYELTVKS 2918
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2919 SDKGSPSQ 2926
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I + ++D E + +E V A
Sbjct: 1610 VISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLFELTVKA 1669
Query: 61 TDRG 64
D+
Sbjct: 1670 NDQA 1673
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + SG++ + LD+E+ +Y + A
Sbjct: 1400 VLRVSASDMDEGSNGLIHYSILKG-NEERQFAIDRFSGQVTLIGKLDYEATPAYSLLIQA 1458
Query: 61 TDRG 64
D G
Sbjct: 1459 VDSG 1462
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D N V ++L E+ S F + VSG + LD E ++ Y V+A
Sbjct: 773 LLVLGATDGDLSDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLVLA 832
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 833 TDLGSPPQ 840
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN V Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 1083 IYQAKAMDPDEGVNGRVLYSLKQNPK--NLFAINEQNGNISLLGALDVHA-GSYQLEILA 1139
Query: 61 TDRG 64
+D G
Sbjct: 1140 SDMG 1143
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3386 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3443
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y + S + F + S +G + +A+ LD+E S +E + ATD
Sbjct: 3284 VSARDRDTAMNGLIRYDI-SSGNEEGIFAINSSTGVLTLAKALDYELCSKHEMTISATDG 3342
Query: 64 G 64
G
Sbjct: 3343 G 3343
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSS--------Y 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 3066 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGASNVNINRH 3122
Query: 55 EFPVVATDRGK 65
F V A+DRG
Sbjct: 3123 SFIVTASDRGN 3133
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ + T + G++ I +LD E + Y VVA
Sbjct: 1186 FFKVQASDKDSGANGEIAYTITDG--NTGDAFGIFPDGQLYIKSELDRELQERYVLLVVA 1243
Query: 61 TDRGKE 66
+DR E
Sbjct: 1244 SDRAVE 1249
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2966 RVTTSDEDIGINAISRYSIADT---SLPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 3022
Query: 63 RG 64
G
Sbjct: 3023 SG 3024
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + + SGE+ + Q LD E+R ++ V A
Sbjct: 2450 ILQVVARDDDQGPNSRLSYVL-LGGNEDNAFAL-TASGELRVIQSLDREARDNFVLVVTA 2507
Query: 61 TDRG 64
D G
Sbjct: 2508 ADAG 2511
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 2034 ILATDDDSGVNGEITYVVDED-DGDGVFFLNPVTGVFNLTRALDYETQQYYILTVRAEDG 2092
Query: 64 GKE 66
G +
Sbjct: 2093 GGQ 2095
>gi|327270455|ref|XP_003220005.1| PREDICTED: protocadherin alpha-C2-like [Anolis carolinensis]
Length = 999
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV+ASD D G N + Y+ P F + VSGE+ + LD+E SSYE V A
Sbjct: 274 RVNASDADEGANGEIEYSFSSYTPPEVRRLFNVDPVSGEVTVNGTLDYEEASSYEIYVQA 333
Query: 61 TDRG 64
TDRG
Sbjct: 334 TDRG 337
>gi|444713192|gb|ELW54100.1| Protocadherin gamma-A3 [Tupaia chinensis]
Length = 1889
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ +G+I I + LD+E YE +
Sbjct: 239 LLTVNATDPDEGFNAQVSYILDKMPGKIAQVFHLNPKTGDITILKSLDYEDAMFYEIKIE 298
Query: 60 ATD 62
A D
Sbjct: 299 AQD 301
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L + A+DPD G N V Y+ + + + F++ S++G+I + DLD+E Y+ V
Sbjct: 1631 LLNIKATDPDEGANGEVTYSFRKVRDKISQLFHLDSLTGDITVLGDLDYEDSGFYDIDVE 1690
Query: 60 ATD 62
A D
Sbjct: 1691 AHD 1693
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
L+V A+D D GVNA + Y +P+ T+ F + +G I LDFE S Y V A
Sbjct: 989 LQVMATDQDEGVNAEITYAFLNAPTSTSLIFILNPNTGAITTNGTLDFEETSRYMLGVEA 1048
Query: 61 TDRGKET 67
D G T
Sbjct: 1049 RDGGVHT 1055
>gi|426249950|ref|XP_004018709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Ovis aries]
Length = 4184
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 542 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 600
Query: 61 TDRGK 65
D G+
Sbjct: 601 QDAGR 605
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1066 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1123
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 858 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 914
Query: 64 G 64
G
Sbjct: 915 G 915
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 958 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1017
Query: 61 TDRG 64
DRG
Sbjct: 1018 VDRG 1021
>gi|441611774|ref|XP_004088040.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Nomascus leucogenys]
Length = 4067
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 634 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 692
Query: 61 TDRGK 65
D G+
Sbjct: 693 QDAGR 697
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 999 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1058
Query: 61 TDRG 64
DRG
Sbjct: 1059 VDRG 1062
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1107 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1164
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 899 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 955
Query: 64 G 64
G
Sbjct: 956 G 956
>gi|301781314|ref|XP_002926069.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Ailuropoda melanoleuca]
Length = 4091
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 579 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 637
Query: 61 TDRGK 65
D G+
Sbjct: 638 QDAGR 642
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1103 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1160
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 895 ISASDDDVGENARITYLLEDN---LPQFRINADSGAITLQAPLDYEDQVTYTLAITARDN 951
Query: 64 G 64
G
Sbjct: 952 G 952
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 995 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1054
Query: 61 TDRG 64
DRG
Sbjct: 1055 VDRG 1058
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 685 VIHIQAVDADHGENARLEYSLTGVAPDMP--FVINSATGWVSVSGPLDRESVEHYFFGVE 742
Query: 60 ATDRG 64
A D G
Sbjct: 743 ARDHG 747
>gi|13786140|ref|NP_112610.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Rattus
norvegicus]
gi|22095544|sp|O88278.1|CELR3_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Multiple epidermal growth factor-like
domains protein 2; Short=Multiple EGF-like domains
protein 2; Flags: Precursor
gi|3449288|dbj|BAA32459.1| MEGF2 [Rattus norvegicus]
Length = 3313
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 555 VLRVTATDKDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVMAPLDFEAEREYALRIRA 613
Query: 61 TDRGK 65
D G+
Sbjct: 614 QDAGR 618
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1079 QITAVDPDDGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 871 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 64 G 64
G
Sbjct: 928 G 928
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 971 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1030
Query: 61 TDRG 64
DRG
Sbjct: 1031 VDRG 1034
>gi|14196462|ref|NP_114398.1| protocadherin gamma-A2 isoform 2 precursor [Homo sapiens]
gi|5457065|gb|AAD43769.1|AF152508_1 protocadherin gamma A2 short form protein [Homo sapiens]
gi|62740017|gb|AAH93871.1| Protocadherin gamma subfamily A, 2, isoform 2 precursor [Homo
sapiens]
gi|85397826|gb|AAI04951.1| Protocadherin gamma subfamily A, 2, isoform 2 precursor [Homo
sapiens]
gi|119582345|gb|EAW61941.1| hCG1982215, isoform CRA_t [Homo sapiens]
Length = 823
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G A V Y L +SP T+ F +KS SGE+ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|380802201|gb|AFE72976.1| protocadherin beta-8 precursor, partial [Macaca mulatta]
Length = 166
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ + F + S++GEI + + LDFE SYE +
Sbjct: 47 VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFEKLQSYEVNIE 106
Query: 60 ATDRG 64
A D G
Sbjct: 107 ARDAG 111
>gi|327292090|ref|XP_003230753.1| PREDICTED: protocadherin beta-16-like, partial [Anolis
carolinensis]
Length = 649
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G NA + Y+ P + N F + VSGEI + ++D+E +SY + AT
Sbjct: 259 KVEARDMDFGSNAQITYSFHRMPEKIHNLFNLNEVSGEITVVGEIDYEKETSYAMNIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|291223028|ref|XP_002731514.1| PREDICTED: fat-like [Saccoglossus kowalevskii]
Length = 3888
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
SASDPD GVN+++ Y + ES + F + +V+GE+ + LD+E+ YE ++ D G
Sbjct: 1747 SASDPDEGVNSLLTYAI-ESGNENGVFSINTVTGELTLVGVLDYETTPKYELWIIVHDNG 1805
Query: 65 K 65
Sbjct: 1806 N 1806
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN-HFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+ASD D +N + Y++ ++ + N HF + S +G I + D+E + F V+
Sbjct: 2995 VLQVTASDKDSLLNRAIIYSIDQAHTTANEHFNIDSRAGIITVKVPPDYELTNEISFNVI 3054
Query: 60 ATDRGKE 66
ATD G E
Sbjct: 3055 ATDSGLE 3061
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V ++D D G + V + + P R F + V+GEI + L+ E+ +S+EF V+ TD
Sbjct: 996 KVLSTDEDDGRDGEVGFNI--DPERALPFVIDHVTGEIMLISKLEREANASFEFVVIVTD 1053
Query: 63 R 63
Sbjct: 1054 N 1054
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 1 MLRVSASDPDCGVNA--MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G NA + T G S F + +SGEI + +D+ES SY V
Sbjct: 1954 VLNLLATDPDDGSNAELLFAITAGNDDSV---FEIDRISGEISLILAMDYESVKSYTLNV 2010
Query: 59 VATDRG 64
+D+G
Sbjct: 2011 TISDQG 2016
>gi|262263289|tpg|DAA06589.1| TPA_inf: protocadherin beta 12 [Anolis carolinensis]
Length = 807
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V ASD D G NA + Y+ P + N F + ++GEI + ++D+E +SY+ V AT
Sbjct: 259 KVEASDLDFGSNAQITYSFHRVPKKILNLFNLNEMTGEIAVFGEIDYERETSYDMSVKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|119585318|gb|EAW64914.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog,
Drosophila) [Homo sapiens]
Length = 3037
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 289 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 347
Query: 61 TDRGK 65
D G+
Sbjct: 348 QDAGR 352
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 705 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 764
Query: 61 TDRG 64
DRG
Sbjct: 765 VDRG 768
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 813 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 870
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 605 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 661
Query: 64 G 64
G
Sbjct: 662 G 662
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 395 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 452
Query: 60 ATDRG 64
A D G
Sbjct: 453 ARDHG 457
>gi|405977654|gb|EKC42093.1| Protein dachsous [Crassostrea gigas]
Length = 643
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G N + Y L HF ++ +G I I + +D+E + YE V+A
Sbjct: 247 IVKVSATDIDSGENGHITYLLDRQRDPEEHFVIEPNTGIIRINKQVDYEHQKHYELSVIA 306
Query: 61 TDRGKET 67
D G +T
Sbjct: 307 RDNGSQT 313
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICI--AQDLDFESRSSYEFP 57
++ V A+DPD G NA V Y++ +PS ++ F + +G I ++D E S+
Sbjct: 465 VVNVMATDPDLGENARVTYSIISNPSSDSDWFEISDTTGFITTKSTANIDCEHNSNPWIT 524
Query: 58 VVATDRG 64
V+ATD G
Sbjct: 525 VIATDHG 531
>gi|432879477|ref|XP_004073490.1| PREDICTED: protocadherin alpha-2-like [Oryzias latipes]
Length = 786
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+++A+D D G NA + Y+L + + +H FY+ SGEI + LD+E ++YE V
Sbjct: 246 ILKLNATDLDEGSNAEIKYSLMKRGNVDSHEKFYVVPESGEIVLKNRLDYEENNAYELRV 305
Query: 59 VATDRG 64
A+D+G
Sbjct: 306 QASDKG 311
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A DPD G NA+++Y L E P N F + + SGEI + + S+ V+ +D
Sbjct: 577 KIRAVDPDSGYNALLSYHLSE-PKGNNLFRIGTSSGEIRTKRRMSDNDLKSHPLLVLVSD 635
Query: 63 RGK 65
G+
Sbjct: 636 NGE 638
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V+A D D NA + Y L +S S + S +GEI Q D+E +++F
Sbjct: 459 ITKVTAHDADIDDNADLTYFLIDSNSWKTQISSILNINSKTGEIMAMQSFDYEKLKTFQF 518
Query: 57 PVVATDRG 64
V ATD G
Sbjct: 519 KVQATDSG 526
>gi|11056030|ref|NP_061738.1| protocadherin gamma-A2 isoform 1 precursor [Homo sapiens]
gi|37999841|sp|Q9Y5H1.1|PCDG2_HUMAN RecName: Full=Protocadherin gamma-A2; Short=PCDH-gamma-A2; Flags:
Precursor
gi|5456934|gb|AAD43716.1| protocadherin gamma A2 [Homo sapiens]
gi|119582358|gb|EAW61954.1| hCG1982215, isoform CRA_ag [Homo sapiens]
Length = 932
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G A V Y L +SP T+ F +KS SGE+ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|345786948|ref|XP_533840.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Canis lupus familiaris]
Length = 3438
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 686 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 744
Query: 61 TDRGK 65
D G+
Sbjct: 745 QDAGR 749
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1210 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1267
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 1002 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 1058
Query: 64 G 64
G
Sbjct: 1059 G 1059
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 1102 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1161
Query: 61 TDRG 64
DRG
Sbjct: 1162 VDRG 1165
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 792 VIHIQAVDADHGENARLEYSLTGMAPDMP--FVINSATGWVSVSGPLDRESVEHYFFGVE 849
Query: 60 ATDRG 64
A D G
Sbjct: 850 ARDHG 854
>gi|109506480|ref|XP_001055576.1| PREDICTED: protocadherin-3 [Rattus norvegicus]
gi|109507187|ref|XP_001064927.1| PREDICTED: protocadherin-3 [Rattus norvegicus]
gi|149017298|gb|EDL76349.1| rCG49302 [Rattus norvegicus]
Length = 797
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA+D D G+ V Y+L + + F + ++GEI ++++LDFE S Y + A
Sbjct: 261 IVTVSATDLDAGIYGKVAYSLFQGGGDSQPFVIDEITGEIRLSKELDFEEISHYNIEIAA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDGG 324
>gi|291393635|ref|XP_002713434.1| PREDICTED: anchor protein-like [Oryctolagus cuniculus]
Length = 3307
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 561 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 619
Query: 61 TDRGK 65
D G+
Sbjct: 620 QDAGR 624
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 877 ISASDDDVGENARITYFLEDN---LPQFRINADSGAITLQAPLDYEDQVTYTLAITARDN 933
Query: 64 G 64
G
Sbjct: 934 G 934
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 3 RVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++A DPD G NA + Y + G P F M SGE+ DLD+E+R Y V A
Sbjct: 1085 QITAVDPDEGPNAHIMYQIVDGNIPEL---FQMDIFSGELTALIDLDYEARQEYVIVVQA 1141
Query: 61 T 61
T
Sbjct: 1142 T 1142
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 977 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1036
Query: 61 TDRG 64
DRG
Sbjct: 1037 VDRG 1040
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 667 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 724
Query: 60 ATDRG 64
A D G
Sbjct: 725 ARDHG 729
>gi|262263273|tpg|DAA06576.1| TPA_inf: protocadherin alpha c2 unspliced isoform [Anolis
carolinensis]
Length = 850
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV+ASD D G N + Y+ P F + VSGE+ + LD+E SSYE V A
Sbjct: 274 RVNASDADEGANGEIEYSFSSYTPPEVRRLFNVDPVSGEVTVNGTLDYEEASSYEIYVQA 333
Query: 61 TDRG 64
TDRG
Sbjct: 334 TDRG 337
>gi|363745754|ref|XP_003643404.1| PREDICTED: protocadherin gamma-A8-like, partial [Gallus gallus]
Length = 411
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+DPD G N V YT+ + + F++ + +G I +A LDFE SY+ V
Sbjct: 262 LLRVTATDPDDGTNGDVKYTVNKITDKALKLFHLDAKTGAIKLAMYLDFEEAQSYKLEVH 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDGG 326
>gi|62740236|gb|AAH94239.1| Pcdhb22 protein [Mus musculus]
Length = 537
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+VSA D D G N V+Y+L S + F + ++SGE+ + + LDFE+ SYE + AT
Sbjct: 4 KVSAKDLDTGTNGEVSYSLFHSSQEMSKTFELNALSGEVRLIKTLDFETTPSYELDIEAT 63
Query: 62 DRG 64
D G
Sbjct: 64 DGG 66
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P++ + S+ +G++ + LD+E+ ++EF
Sbjct: 214 ISATDSDSGSNAHITYSL--LPAQEPQLALNSLISINADNGQLFALRALDYEALQAFEFH 271
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 272 VSATDRG 278
>gi|410917722|ref|XP_003972335.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Takifugu
rubripes]
Length = 4583
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA + Y+L ES + N F + V G I +A++LD S++ YE V A
Sbjct: 1554 VLQVTARDKDKGHNAEIAYSL-ESGNFANTFAIDPVLGTITVAKELDRNSKAQYELTVKA 1612
Query: 61 TDRG 64
+D G
Sbjct: 1613 SDHG 1616
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A DPD G ++ V Y+L ++ HF + +SG + I Q+LD+E++ Y A
Sbjct: 917 IMWLEAHDPDIGPSSQVRYSLVDNGD--GHFEVDKLSGALRIVQNLDYETKQVYNLTAKA 974
Query: 61 TDRGK 65
D+GK
Sbjct: 975 KDKGK 979
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + ASD D NAM+ Y + E P N+F + S +G I I LD+E R+++ F V
Sbjct: 1765 LVIRASDADGDQNAMLVYQIVE-PFAHNYFAIDSNTGAIRITTALDYEQRNAFHFTVQVH 1823
Query: 62 DRG 64
D G
Sbjct: 1824 DLG 1826
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR---TNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+++V ASD D G N V Y+L S + F + S +G + ++LD E Y
Sbjct: 2801 VIQVRASDQDSGTNGHVVYSLDARQSSQEISELFAVNSETGWVTTLKELDREKMEKYTIG 2860
Query: 58 VVATDRGKETQ 68
V+ATD+G Q
Sbjct: 2861 VLATDQGDRVQ 2871
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASD D NA + Y L + S F + S +GE+ +Q LD E + + F + A
Sbjct: 3017 ILQVSASDADIRSNAHITYELQGAGSEL--FIIDSDTGELKTSQPLDREEQEEHRFTMRA 3074
Query: 61 TDRG 64
D G
Sbjct: 3075 VDGG 3078
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G N Y+ E ++ F + SG + + LDF YE ++A D
Sbjct: 139 KVTATDADIGTNGEYYYSFRE---WSDMFAVHPTSGVVTLTGKLDFSETRLYELEILAVD 195
Query: 63 RG 64
RG
Sbjct: 196 RG 197
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ ASD D G+N+ + Y+L +S F + +G I + + LD E +++YE +A+D
Sbjct: 3121 KLLASDIDVGLNSDIVYSLLDSAD--GFFSIDEQTGVISLERPLDRELQATYELRALASD 3178
Query: 63 RG 64
+G
Sbjct: 3179 QG 3180
>gi|397495185|ref|XP_003818440.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Pan paniscus]
Length = 3312
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 564 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 622
Query: 61 TDRGK 65
D G+
Sbjct: 623 QDAGR 627
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 980 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1039
Query: 61 TDRG 64
DRG
Sbjct: 1040 VDRG 1043
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1088 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 880 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 936
Query: 64 G 64
G
Sbjct: 937 G 937
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 670 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 727
Query: 60 ATDRG 64
A D G
Sbjct: 728 ARDHG 732
>gi|363738859|ref|XP_003642083.1| PREDICTED: protocadherin beta-15-like [Gallus gallus]
Length = 802
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++RVSA+DPD G N V Y E R++ F + S +GEI + +LDFE ++ V
Sbjct: 271 VVRVSAADPDEGSNGKVRYKFTEMSERSSQVFQLYSETGEIRVWGNLDFEEADDHDIEVK 330
Query: 60 ATDRG 64
ATD G
Sbjct: 331 ATDGG 335
>gi|397517956|ref|XP_003829169.1| PREDICTED: protocadherin gamma-A2 [Pan paniscus]
Length = 823
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G A V Y L +SP T+ F +KS SGE+ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|355559659|gb|EHH16387.1| hypothetical protein EGK_11661, partial [Macaca mulatta]
Length = 3211
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 555 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 613
Query: 61 TDRGK 65
D G+
Sbjct: 614 QDAGR 618
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 971 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1030
Query: 61 TDRG 64
DRG
Sbjct: 1031 VDRG 1034
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1079 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 871 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 64 G 64
G
Sbjct: 928 G 928
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G NA + Y+L S T F + S +G + ++ LD ES Y F V A
Sbjct: 661 VIHIQAVDADHGENARLEYSLTGVASDTP-FVINSATGWVSVSGPLDRESVEHYFFGVEA 719
Query: 61 TDRG 64
D G
Sbjct: 720 RDHG 723
>gi|351701751|gb|EHB04670.1| Protocadherin Fat 4 [Heterocephalus glaber]
Length = 4953
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2068 VFKAQASDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLMVVA 2125
Query: 61 TDRGK 65
TD+G+
Sbjct: 2126 TDKGQ 2130
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA ++Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIHYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 VDRG 329
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1438 VISVTAHDPDADINGQLSYTIVQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1497
Query: 61 TDRG 64
D+
Sbjct: 1498 NDQA 1501
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 710 VSATDPDLGPNGTVKYSI--SAGDRSRFQINAQSGVISTKMALDREEKTAYQLQIVATDG 767
Query: 64 GK 65
G
Sbjct: 768 GN 769
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ S F + VSG + LD E ++ Y V+A
Sbjct: 601 LLVLGATDGDLGDNGTVRFSLQEAESDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 660
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 661 TDLGTPPQ 668
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D G N V Y + + S F M SV+G I + + LD E ++Y V A
Sbjct: 2172 ILQVFAADGDEGTNGQVRYGIVDG-STNQEFRMDSVTGVITVVKPLDREKTATYLLTVQA 2230
Query: 61 TDRG 64
DRG
Sbjct: 2231 ADRG 2234
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1336 VTATDSDSGDNADLHYSITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1392
Query: 62 DRGK 65
D+G+
Sbjct: 1393 DQGR 1396
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1228 VLRVSASDVDEGNNGLIHYSVIKG-NEERQFAIGSTSGQVTLIGKLDYEATPAYFLVIQA 1286
Query: 61 TDRG 64
D G
Sbjct: 1287 VDSG 1290
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 911 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGNISLLGPLDVHA-GSYQIEILA 967
Query: 61 TDRG 64
+D G
Sbjct: 968 SDMG 971
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + ++ N F + +GEI + LD E S Y V +
Sbjct: 2686 ILTVSAMDKDSGPNGQLDYEIVHG-NKENSFSINHATGEIRSIRPLDREKVSHYMLTVKS 2744
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2745 SDKGSPSQ 2752
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ YT+ + F + S +G + +A+ LD+E +E + ATD
Sbjct: 3110 VSARDRDAAMNGLITYTISAG-NEEGIFAINSSTGVLTLAKALDYELCQKHEITISATDG 3168
Query: 64 G 64
G
Sbjct: 3169 G 3169
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + + S SGE+ + Q LD E++ + + A
Sbjct: 2278 ILQVVARDDDQGSNSKLSYVL--RGGNEDQAFTLSASGELRVTQSLDRETKEHFVLVITA 2335
Query: 61 TDRG 64
TD G
Sbjct: 2336 TDSG 2339
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+++ G S F + +G+I + LD E++ +Y VV+
Sbjct: 2382 VLLVNASDADASTNAVISIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLIVVS 2436
Query: 61 TDRG 64
+D G
Sbjct: 2437 SDAG 2440
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E + G++ I +LD E + Y VVA
Sbjct: 1014 FFKVQASDEDSGANGEIAYTIAE--GNAGDAFGIFPDGQLYIKSELDRELQDRYVLVVVA 1071
Query: 61 TDRGKE 66
+DR E
Sbjct: 1072 SDRAVE 1077
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3212 VIHLNATDNDSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLIVKA 3269
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E + F++ V+G + + LD+E++ Y V A D
Sbjct: 1862 ILATDDDSGVNGEITYIVNED-DQDGIFFLNPVTGVFNLTRVLDYEAQQYYILSVRAEDG 1920
Query: 64 GKE 66
G +
Sbjct: 1921 GGQ 1923
>gi|156351334|ref|XP_001622464.1| predicted protein [Nematostella vectensis]
gi|156209012|gb|EDO30364.1| predicted protein [Nematostella vectensis]
Length = 2058
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++SA D D G N+ V Y + ++T F + SV+GE+ + LDFE SY V+
Sbjct: 65 ILKISAIDADSGTNSQVQYKFSNATATQTPFFSLNSVNGELTLGGPLDFEVARSYMLVVI 124
Query: 60 ATDRG 64
A D G
Sbjct: 125 AEDLG 129
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV ASD D G N + Y L ++ + F + +V+GEI +A +D E+ ++ V A
Sbjct: 939 VLRVHASDRDQGANGKITYKLTNG-NKDDAFSINNVTGEITVAGVIDREAVHTFVLTVQA 997
Query: 61 TDRGK 65
D+G+
Sbjct: 998 EDQGE 1002
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+DPD G N Y + + + FY+ + +G I I LD+E S Y V A
Sbjct: 1627 VVQVIATDPDEGANGQFTYKITAGDTD-DVFYIDANTGLITIKAKLDYEKTSLYNLTVSA 1685
Query: 61 TDRG 64
D G
Sbjct: 1686 QDLG 1689
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIA-QDLDFESRSSYEFPVVATD 62
++A DPD G N + Y++ SR F + S +G + I+ LD E + SY+ + TD
Sbjct: 622 IAAVDPDAGSNGQLTYSMSGGDSR---FTLNSATGRLQISPTGLDRELKDSYDLIINVTD 678
Query: 63 RG 64
G
Sbjct: 679 NG 680
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+A+D D G+NA++ Y+ + ++ FY+ +G+I + LD E ++ Y V A +
Sbjct: 1110 RVTATDRDEGINAIIFYSSNGAEAK---FYVSRSTGDIIVDSPLDREFKNVYILNVTAAN 1166
>gi|145309304|ref|NP_001398.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Homo
sapiens]
gi|229462826|sp|Q9NYQ7.2|CELR3_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Cadherin family member 11; AltName:
Full=Epidermal growth factor-like protein 1;
Short=EGF-like protein 1; AltName: Full=Flamingo homolog
1; Short=hFmi1; AltName: Full=Multiple epidermal growth
factor-like domains protein 2; Short=Multiple EGF-like
domains protein 2; Flags: Precursor
Length = 3312
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 564 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 622
Query: 61 TDRGK 65
D G+
Sbjct: 623 QDAGR 627
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 980 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1039
Query: 61 TDRG 64
DRG
Sbjct: 1040 VDRG 1043
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1088 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 880 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 936
Query: 64 G 64
G
Sbjct: 937 G 937
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 670 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 727
Query: 60 ATDRG 64
A D G
Sbjct: 728 ARDHG 732
>gi|449267271|gb|EMC78237.1| Protocadherin Fat 4, partial [Columba livia]
Length = 2772
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D G N + Y ++ S+++ F + VSGEI +++ LDFE+ YE V
Sbjct: 1997 VLRVVATDVDVGPNGEITYQFIQAVSQSDFTFLIDPVSGEIRLSKPLDFEAAQKYELSVR 2056
Query: 60 ATDRG 64
A+D G
Sbjct: 2057 ASDGG 2061
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D G N ++Y + S+++ F + VSGEI I + LDFE+ YE V
Sbjct: 2423 VLSVVATDLDVGPNGDISYQFSQVVSQSDSAFVIDHVSGEIKITKPLDFEAAERYELSVQ 2482
Query: 60 ATDRG 64
ATD G
Sbjct: 2483 ATDGG 2487
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D G N ++Y ++ S+++ F + SGEI + + LDFE+ ++E V
Sbjct: 1566 VLRVVATDQDTGHNGDISYQFSQAVSQSDSAFVIDPFSGEIKLTKPLDFETAENHELSVR 1625
Query: 60 ATDRG 64
ATD G
Sbjct: 1626 ATDGG 1630
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ VSASD D G N + Y++ ++ S NH F + S +GEI I + +D+E +YE V
Sbjct: 66 VVAVSASDLDSGTNGEITYSIVQN-SEENHQTFKISSETGEIRIKKPVDYEETKTYEIDV 124
Query: 59 VATDRG 64
ATD G
Sbjct: 125 QATDGG 130
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D G N ++Y ++ S+++ F + VSGEI + + LDFE+ ++E V
Sbjct: 1135 VLSVLATDLDAGPNGDISYQFSQAVSQSDSAFVIDHVSGEIKLRKPLDFETAENHELSVR 1194
Query: 60 ATDRG 64
ATD G
Sbjct: 1195 ATDGG 1199
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D G N ++Y ++ S+++ F + SGEI + + LDFE+ ++E V
Sbjct: 599 VLSVLATDLDAGPNGDISYQFSQAVSQSDSAFVIDPFSGEIKLTKPLDFETAENHELSVR 658
Query: 60 ATDRG 64
ATD G
Sbjct: 659 ATDGG 663
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D G N ++Y + + + F + SGEI + + LDFE+ YE V
Sbjct: 385 VLSVVATDQDVGFNGDISYQFSQVAGQIRSAFVIDPTSGEIKLTKPLDFEAAEKYELSVR 444
Query: 60 ATDRG 64
ATD G
Sbjct: 445 ATDGG 449
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-GEICIAQDLDFESRSSYEFPVV 59
+LRV A D D G NA V Y LGE R +K E+ + + LD E +S F ++
Sbjct: 1028 VLRVRAWDTDWGQNARVRYRLGEGRVRGAPLRIKGKKYVELVLKKPLDREEQSEMGFSLI 1087
Query: 60 ATDRG 64
A D G
Sbjct: 1088 AVDGG 1092
>gi|426340701|ref|XP_004034266.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Gorilla
gorilla gorilla]
Length = 3287
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 564 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 622
Query: 61 TDRGK 65
D G+
Sbjct: 623 QDAGR 627
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 980 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1039
Query: 61 TDRG 64
DRG
Sbjct: 1040 VDRG 1043
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1088 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 880 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 936
Query: 64 G 64
G
Sbjct: 937 G 937
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 670 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 727
Query: 60 ATDRG 64
A D G
Sbjct: 728 ARDHG 732
>gi|7407146|gb|AAF61929.1|AF231023_1 protocadherin Flamingo 1 [Homo sapiens]
Length = 3312
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 564 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 622
Query: 61 TDRGK 65
D G+
Sbjct: 623 QDAGR 627
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 980 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1039
Query: 61 TDRG 64
DRG
Sbjct: 1040 VDRG 1043
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1088 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 880 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 936
Query: 64 G 64
G
Sbjct: 937 G 937
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 670 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 727
Query: 60 ATDRG 64
A D G
Sbjct: 728 ARDHG 732
>gi|260788463|ref|XP_002589269.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
gi|229274445|gb|EEN45280.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
Length = 2821
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+DPD G N+ + Y+L S+ HF + S +G+I + +LDFES Y V A D
Sbjct: 571 VAATDPDEGTNSQIRYSLIGGNSQ-GHFTIDSATGDISVITNLDFESTPRYRLIVKAQDS 629
Query: 64 GK 65
G+
Sbjct: 630 GR 631
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 3 RVSASDPDCGVNAMVNY--TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
R++A+DPD G NA V Y T G +P F + SGE+ DLD+E+R+ YE V A
Sbjct: 1090 RITANDPDEGQNAEVMYYITKGNNPEL---FQLDIFSGELVTLIDLDYEARNFYEITVQA 1146
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G NA + Y+L P+R F + +G I +LD E+ + Y+F V A
Sbjct: 673 VIHIQAIDADSGSNAELTYSLANVPARM-PFEIDGDTGWIVTNAELDREAHAIYDFNVQA 731
Query: 61 TDRG 64
D+G
Sbjct: 732 ADQG 735
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G NA ++Y++ N F ++ +G I Q LD E+++S+ V A
Sbjct: 880 ILVVSATDGDEGENARISYSM----DILNAFEIEPSTGAIKTKQRLDHEAQASFAVSVTA 935
Query: 61 TDRG 64
TD G
Sbjct: 936 TDHG 939
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN-HFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D G N+ + Y++ +PS TN F + G I + LD E+ +SY V
Sbjct: 462 VLTVRATDQDIGPNSDIRYSI-INPSGTNTAFQISRRDGVITTTEALDRETTASYRLEVR 520
Query: 60 ATDRG 64
A+D+G
Sbjct: 521 ASDQG 525
>gi|24416520|gb|AAH38797.1| Protocadherin beta 15 [Homo sapiens]
gi|123993279|gb|ABM84241.1| protocadherin beta 15 [synthetic construct]
gi|124000241|gb|ABM87629.1| protocadherin beta 15 [synthetic construct]
Length = 787
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S + F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
V A+D D G NA V Y+L P + H + S+ +G + Q LD+E+ ++EF
Sbjct: 473 VRATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|395817812|ref|XP_003782342.1| PREDICTED: uncharacterized protein LOC100955282 [Otolemur
garnettii]
Length = 1760
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S + F + S +GEI + + LDFE+ SSYE +
Sbjct: 917 VVKVSARDLDAGTNGQISYSLFYSSQEISKTFELSSFTGEIRLIKKLDFETISSYELDIE 976
Query: 60 ATDRG 64
A+D G
Sbjct: 977 ASDGG 981
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 1129 ISATDRDSGTNAQVAYSL--LPPQDPHLPLASLVSINADNGHLFALRALDYEALQAFEFR 1186
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 1187 VGATDRG 1193
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 4 VSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
VSA D D G+N + Y+ E S+T F + ++GEI + + LDFE SY+ + A
Sbjct: 262 VSARDLDMGINGKIFYSFFYNDEEISKT--FALNELTGEIKLIRKLDFEKIVSYKVDIKA 319
Query: 61 TD 62
+D
Sbjct: 320 SD 321
>gi|363739133|ref|XP_414584.3| PREDICTED: protocadherin Fat 2 [Gallus gallus]
Length = 4403
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D +N + Y++ E + HF ++ SG+I IA+ LD E SSY V A
Sbjct: 3349 ILTVSADDLDGAMNNQITYSIVEG-NPLGHFAIQPKSGQISIAKHLDREEISSYSLTVRA 3407
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 3408 TDNGHPAQ 3415
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V+A+D D G + V Y+L ES F + +G I ++LD E++ +Y F VV
Sbjct: 2824 VIQVTANDQDTGSDGQVTYSLEAESGKLRGLFTIDGETGWITTLKELDCETQETYRFYVV 2883
Query: 60 ATDRGKETQ 68
ATD G++ Q
Sbjct: 2884 ATDHGRKVQ 2892
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G NA + Y+ E +F++ G+I + + LD+ + + Y V+A
Sbjct: 2096 LFQVSATDKDIGNNAAITYSFAED---YKYFWIDPYLGDISLKKPLDYHALNKYSLRVIA 2152
Query: 61 TDRGK 65
D G+
Sbjct: 2153 KDNGE 2157
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+DPD G NA + Y+L P F + +GE+ + LD E + +Y A
Sbjct: 3037 ILKISATDPDVGSNAQITYSL-HGPG-AEEFRLGPHTGELTTSAPLDREQKPTYHLVAKA 3094
Query: 61 TDRG 64
TD G
Sbjct: 3095 TDGG 3098
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNY-TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N +V+Y L + T F + + +G+I AQ LD+E + V
Sbjct: 2298 VVQIIASDKDSGRNKVVSYQILDDGSDATKFFNIDASTGQITTAQALDYEKTQQFRMKVR 2357
Query: 60 ATDRG 64
A D G
Sbjct: 2358 AADHG 2362
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D G+NA V Y+L +S + HF ++ +G I + + L S++E V ATD+
Sbjct: 3142 VSARDLDEGLNAEVVYSLSDSAN--GHFSIEETTGVIRLEKPLKDSQHSAFELTVCATDQ 3199
Query: 64 G 64
G
Sbjct: 3200 G 3200
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A DPD G V Y+L F++ ++G + + ++LD+E + SY V
Sbjct: 946 LLFLEAFDPDAGSGGEVRYSLVNDEEMM--FHIDKLTGALRLEKELDYEKKDSYNLTVQV 1003
Query: 61 TDRGK 65
D GK
Sbjct: 1004 RDSGK 1008
>gi|119582372|gb|EAW61968.1| protocadherin beta 15 [Homo sapiens]
Length = 787
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S + F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + Q LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|380020280|ref|XP_003694018.1| PREDICTED: LOW QUALITY PROTEIN: fat-like cadherin-related tumor
suppressor homolog [Apis florea]
Length = 4753
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
A+DPD G V Y L ++ +F + VSG I I Q LDFE R + +VA DRG+
Sbjct: 1027 ATDPDEGGGGDVEYFLSDAMESEGYFKVDKVSGTIRITQSLDFEERQMHTLTIVARDRGE 1086
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A D D G N + Y+L E T+ F + VSG I + + L + R+ +E V+A
Sbjct: 220 ILRVIAEDADLGRNGEIYYSLAE---ETDQFAVHPVSGVITLTRPLRYSERAIHELVVLA 276
Query: 61 TDRG 64
DRG
Sbjct: 277 KDRG 280
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRVS+ D D +N V Y + ++ + T+ F++ G I + + LD E+ S+ F V+
Sbjct: 2376 VLRVSSRDNDTDINQQVRYAIQNDTENSTDLFHIDPEEGVIFLKRSLDHEAHESHHFTVI 2435
Query: 60 ATDRG 64
A DRG
Sbjct: 2436 AIDRG 2440
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ A D D G N V Y+ G N F + + +G I LD E + Y+F VV
Sbjct: 2896 ILKIIAHDDDLGSNGEVRYSFGSDIGELANVFTVDAYTGWISTLVQLDKEKQPEYKFQVV 2955
Query: 60 ATDRG 64
ATD G
Sbjct: 2956 ATDNG 2960
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R +ASD D G NA V Y+L + TN F + V+G + + LD E + YE + A
Sbjct: 914 VWRANASDADLGENARVTYSL---VTETNDFRVDPVTGVLTVFGRLDRERQDVYELRIRA 970
Query: 61 TDRG 64
D G
Sbjct: 971 QDNG 974
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+D D G+N + Y +S HF + + SG + + + LD E+++ Y + A D
Sbjct: 3210 KVHATDDDIGINRKIRYEFIDSAD--GHFLIATDSGIVTLGKPLDRETKAMYNVTIQALD 3267
Query: 63 RG 64
+G
Sbjct: 3268 QG 3269
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A D D +NA++NY + E R +F++ S +G I LD E+ + F V +
Sbjct: 1862 LVIKAEDADSELNALLNYDIVEDLPR-KYFHIDSSTGAIRTVMVLDHETVPKFTFHVKVS 1920
Query: 62 DRGK 65
D GK
Sbjct: 1921 DLGK 1924
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+ D GVNA V Y++ + F + + +G I IA+ LDFE Y + A D
Sbjct: 3314 RVLATSKDTGVNADVYYSI-VGGNEHKKFQIDARTGVIIIAEQLDFERARDYFLTIQAVD 3372
Query: 63 RG 64
G
Sbjct: 3373 GG 3374
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G NA + Y++ S + N F + G I +A++LD + S Y V A
Sbjct: 1651 VVQVYAIDRDKGDNAKITYSI-TSGNVGNMFTIDPNLGVIRVARELDLSASSEYILLVKA 1709
Query: 61 TDRG 64
TD G
Sbjct: 1710 TDHG 1713
>gi|9256610|ref|NP_061758.1| protocadherin beta-15 precursor [Homo sapiens]
gi|13431379|sp|Q9Y5E8.1|PCDBF_HUMAN RecName: Full=Protocadherin beta-15; Short=PCDH-beta-15; Flags:
Precursor
gi|5457037|gb|AAD43755.1|AF152494_1 protocadherin beta 15 [Homo sapiens]
gi|14009449|gb|AAK51610.1|AF217742_1 protocadherin-beta15 [Homo sapiens]
Length = 787
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S + F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P R H + S+ +G + Q LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|195022843|ref|XP_001985650.1| GH17186 [Drosophila grimshawi]
gi|193899132|gb|EDV97998.1| GH17186 [Drosophila grimshawi]
Length = 4534
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L V+A D D G+N M+ Y + + ++ N F + S +G I I + LD+E +S+Y F V +
Sbjct: 1695 LTVNAFDADVGLNGMLQYKILDDLAK-NVFKIDSTTGAIEILRSLDYEKKSNYSFFVTVS 1753
Query: 62 DRGK 65
D GK
Sbjct: 1754 DMGK 1757
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D GVN + Y+ L +S S F + +G+I I + L++ S YE V+
Sbjct: 53 ILKVIADDADLGVNGEIYYSFLIDSES----FAVHPTTGDITILKQLNYAENSHYELTVL 108
Query: 60 ATDRG 64
A DRG
Sbjct: 109 ANDRG 113
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A+D D G+NA + Y+L F + +G I +++ LD E + YE +V DRG
Sbjct: 752 ATDADVGINAEITYSLS---VEFKEFTINKTTGCIVLSKSLDREHKDKYELHIVVKDRG 807
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D G N V Y E + + + +G I + LD E +S Y V+
Sbjct: 2727 ILKVTATDADTGSNGDVRYYFDEESNGIRSIFDIDIYTGWITLLSSLDREVQSEYNLKVI 2786
Query: 60 ATDRG 64
ATD G
Sbjct: 2787 ATDNG 2791
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+D D G+N + Y+L + + +++F + +G I + ++LD E+ S Y F V D
Sbjct: 3039 KVHATDKDFGMNRKIKYSL--TGTNSDYFGISKSTGIIKLEKNLDRETISLYNFTVKVED 3096
Query: 63 RGK 65
GK
Sbjct: 3097 FGK 3099
>gi|23395244|gb|AAN31758.1| protocadherin alpha 4 [Rattus norvegicus]
Length = 512
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D G N V Y+ SP+ N F++ V+GEI + +DFE +SYE +
Sbjct: 261 VVKVNASDLDEGANGEVMYSFSTDISPNVKNKFHIDPVTGEIAVKGYIDFEECTSYEILI 320
Query: 59 VATDRGK 65
D+G+
Sbjct: 321 EGIDKGQ 327
>gi|442768496|gb|AGC70195.1| protocadherin-like protein, partial [Stylophora pistillata]
Length = 2608
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G NA+++Y+ +S T+ F ++S +G + I + LD E + Y F VVA
Sbjct: 981 ILNVSATDADTGNNALISYSF-QSGVDTSMFGLRS-NGWLFITRQLDREQQEVYRFTVVA 1038
Query: 61 TDRG 64
TD+G
Sbjct: 1039 TDKG 1042
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A D D G N V YT+ + + F + SG I + + LDFE +S Y+ +VA D+
Sbjct: 1294 VTAKDEDTGNNGKVRYTIDQG-NGGKVFEINETSGVIALRKPLDFEKKSKYQLRIVARDQ 1352
Query: 64 GKETQ 68
G+ +Q
Sbjct: 1353 GQNSQ 1357
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A DPD G+ V YT +P+ T F M S +G + + +DFE Y V+A D
Sbjct: 880 VTAQDPDSGLFGRVRYTFLSNPNNT--FQMNSSTGALTVTHLIDFEGPRQYLIIVLAEDG 937
Query: 64 G 64
G
Sbjct: 938 G 938
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D G+N +V+Y+L R F + +G + + +DFE++S Y VVA
Sbjct: 565 VLQVLANDIDSGINGIVHYSLATQHRRV-PFSIDPNTGLLSTSGQIDFEAQSLYVINVVA 623
Query: 61 TDRG 64
+D G
Sbjct: 624 SDGG 627
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V ASDPD G N M+ Y +P F + + +G I LD E Y + A
Sbjct: 1188 VLTVEASDPDAGSNGMITYFFASNPGV---FTIDARTGVITTTARLDREKHDRYTLSIGA 1244
Query: 61 TDRGKETQ 68
D G Q
Sbjct: 1245 KDHGNPNQ 1252
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V ASD D G NA ++YT E PS F + +G I Q L+ E RSSY V A D
Sbjct: 1087 QVPASDKDAGANAKISYTF-EPPSL--EFAIDHNTGIIRTNQVLNREQRSSYILTVKAND 1143
Query: 63 RG 64
G
Sbjct: 1144 HG 1145
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR A+D D G N + ++L S F + S +G I Q+ D+ ++Y F A
Sbjct: 1821 ILRAQANDIDSGKNGEITFSL--SSDALGIFRIDSKTGTIYTLQEFDYYITAAYNFLCRA 1878
Query: 61 TDRG 64
TD+G
Sbjct: 1879 TDKG 1882
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+D D M Y+ G + + F + ++G+I + + LD+E +SYE V +D
Sbjct: 2243 RVVATDKDEHPKLM--YSFGNDKTIYDVFRIDQLTGDIALLESLDYERNTSYELNVTCSD 2300
>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
Length = 4971
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D N +V+Y + E + F + S SG++ + LD+ES SSY ++A
Sbjct: 1205 LLRVSASDVDESKNGVVHYHIAEG-NEEAQFTIDSSSGQVTLVGKLDYESSSSYLLKIIA 1263
Query: 61 TDRG 64
D G
Sbjct: 1264 DDAG 1267
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+++ASD D G NA + Y L E F + +G I I + LDFES+ Y + A
Sbjct: 254 ILQITASDQDEGANAEIRYILDEG----TPFQIDPKTGTIVIKESLDFESKKEYSLTIHA 309
Query: 61 TDRG 64
D+G
Sbjct: 310 ADKG 313
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V ASD D G N + +++ + ++ F + SV+G I +A+ LD E+RS+Y V A
Sbjct: 2152 VIQVFASDADDGSNGQIRFSISSGNTNSD-FRIDSVTGVISVAKRLDRETRSAYSLVVQA 2210
Query: 61 TDRG 64
DRG
Sbjct: 2211 ADRG 2214
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ A+D D G N+ V Y+L N F + +V G++ + +LD E S+Y VVA
Sbjct: 2048 VFTAQATDADSGPNSYVEYSL--RGQHQNKFIIGTVDGDVRLIGELDREELSNYTVTVVA 2105
Query: 61 TDRG 64
TD+G
Sbjct: 2106 TDKG 2109
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + ASDPD G+N +V Y+L E+P H + K G I + L S +SYE V A
Sbjct: 888 IFQAKASDPDEGLNGVVVYSLKENPKGLFHIHEK--HGLITLTGSLK-ASTNSYEVEVTA 944
Query: 61 TDRG 64
+D G
Sbjct: 945 SDMG 948
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L +SASD D G N + ++ E+P+ F + +VSG + A +LD E ++SY +
Sbjct: 577 LLVLSASDSDLGPNGTIRFSFDAETPASLRELFRLDAVSGRLSTAVELDREDQASYLLHI 636
Query: 59 VATDRG 64
A D G
Sbjct: 637 RAADAG 642
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D G N V Y + S T F++ S +G+I LD E +++Y+ V ATD
Sbjct: 688 VLASDRDLGRNGTVKYVI--SSGDTTKFHIHSNTGKITTLVALDREEKTAYQLQVRATDG 745
Query: 64 G 64
G
Sbjct: 746 G 746
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ V+A+D D G NA + Y++ + NH F + +G I + + LD+E++S Y+ +
Sbjct: 1310 VVSVTATDADSGQNADITYSIT---AINNHGTFSISPNTGSIFLVKKLDYETQSFYKLNI 1366
Query: 59 VATDRGK 65
A D G+
Sbjct: 1367 TAKDNGR 1373
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L ++A D D +N + Y++ + R N+F + SG I ++++D E + +E V A
Sbjct: 1415 VLTITAHDTDADINGQLEYSIVQQVPRGNYFGIDPSSGLIYTSKEIDREFSNLFELTVKA 1474
Query: 61 TDRG 64
TD+
Sbjct: 1475 TDQA 1478
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N + Y + + ++ N F + +GEI + LD E + Y V A
Sbjct: 2664 VLLVSAVDLDKGSNGQLEYAIIDG-NKDNIFSIHRATGEIRTNRPLDREKVALYSLKVKA 2722
Query: 61 TDRG 64
TDRG
Sbjct: 2723 TDRG 2726
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y +V
Sbjct: 1738 IMQLTAKDADEGPNALVTYTIISGAD--DSFRIDPESGDLIATKKLDRERRSKYSL-LVR 1794
Query: 61 TDRGKET 67
D GK++
Sbjct: 1795 ADDGKQS 1801
>gi|307194561|gb|EFN76853.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 3259
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N MV Y + R N F++ S++G + I + LD++ Y + A
Sbjct: 1379 ILTVSAVDGDSGPNGMVRYKISAGNER-NEFFVHSITGAVTILEPLDYDMVQEYRLNITA 1437
Query: 61 TDRGKE 66
TD G E
Sbjct: 1438 TDLGFE 1443
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+++SD D G NA V+Y+ +P R F + ++SG + +A LD E + Y +VA
Sbjct: 1060 VIRITSSDLDIGQNANVSYSFTYNPGR--KFSIDALSGNVTVAGHLDREEQDEYLLKIVA 1117
Query: 61 TD 62
D
Sbjct: 1118 VD 1119
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G N V Y+L E+ S F + SV G + ++ LD E S+Y V+A
Sbjct: 327 VMSIKAVDRDEGRNGYVEYSL-ENDSLP--FTLGSVDGLLRVSGPLDREQTSNYTLQVIA 383
Query: 61 TDRG 64
DRG
Sbjct: 384 KDRG 387
>gi|410951053|ref|XP_003982216.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Felis
catus]
Length = 3316
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 564 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 622
Query: 61 TDRGK 65
D G+
Sbjct: 623 QDAGR 627
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1088 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 880 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 936
Query: 64 G 64
G
Sbjct: 937 G 937
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 980 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1039
Query: 61 TDRG 64
DRG
Sbjct: 1040 VDRG 1043
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 670 VIHIQAVDADHGENARLEYSLTGVAPDMP--FVINSATGWVSVSGPLDRESVEHYFFGVE 727
Query: 60 ATDRG 64
A D G
Sbjct: 728 ARDHG 732
>gi|322789053|gb|EFZ14511.1| hypothetical protein SINV_16551 [Solenopsis invicta]
Length = 1727
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV +D D G+N V Y+L E ++ HF + +G+I + ++LD E SY VVA
Sbjct: 1200 LLRVYTTDVDEGLNGDVFYSL-EDGNQHGHFMIDEATGQISLVKELDREMSDSYVLTVVA 1258
Query: 61 TDRGKETQ 68
D G ET+
Sbjct: 1259 HDAGLETR 1266
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A DPD G N +V+Y+ L + P + HF + SG I +D E +++ V
Sbjct: 1411 IVTITAEDPDSGDNGVVSYSILSQDPEDQVRHFGINPSSGVIHTLLPIDREEVDTFKLVV 1470
Query: 59 VATDRGK 65
VATD+ +
Sbjct: 1471 VATDQAQ 1477
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G+NA + Y G + F + S +G + LD E + S E V A D
Sbjct: 460 ISATDADSGLNARIYYEFGLG-NEQGWFAIDSDTGLVTTVAALDREIQGSLELHVSARDG 518
Query: 64 GKETQ 68
G T+
Sbjct: 519 GPNTK 523
>gi|327270443|ref|XP_003219999.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
gi|262263284|tpg|DAA06585.1| TPA_inf: protocadherin beta 8 [Anolis carolinensis]
Length = 821
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV A D D G NA + Y+ P + N F + ++GEI + ++D+E ++YE + AT
Sbjct: 259 RVEARDLDFGSNAQITYSFHRMPKKIHNLFNLNEMTGEITVLGEIDYEKETNYEMTIQAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|127139048|ref|NP_001076037.1| protocadherin gamma-A2 precursor [Pan troglodytes]
gi|62510871|sp|Q5DRB8.1|PCDG2_PANTR RecName: Full=Protocadherin gamma-A2; Short=PCDH-gamma-A2; Flags:
Precursor
Length = 932
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G A V Y L +SP T+ F +KS SGE+ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|189053489|dbj|BAG35655.1| unnamed protein product [Homo sapiens]
Length = 787
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S + F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
V A+D D G NA V Y+L P + H + S+ +G + Q LD+E+ ++EF
Sbjct: 473 VRATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|150247129|ref|NP_001092838.1| protocadherin gamma-A2 precursor [Bos taurus]
gi|146186663|gb|AAI40647.1| PCDHGA2 protein [Bos taurus]
gi|296485226|tpg|DAA27341.1| TPA: protocadherin gamma subfamily A, 2 [Bos taurus]
Length = 826
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G NA V Y L ++P T+ F +KS SGEI I + LD+E +E +
Sbjct: 261 ILTVTATDADEGYNAQVTYFLEKNPEETSEVFELKSSSGEITIIKSLDYEDAKFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|410036931|ref|XP_001146508.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Pan troglodytes]
Length = 3087
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 564 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 622
Query: 61 TDRGK 65
D G+
Sbjct: 623 QDAGR 627
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 980 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1039
Query: 61 TDRG 64
DRG
Sbjct: 1040 VDRG 1043
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1088 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 880 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 936
Query: 64 G 64
G
Sbjct: 937 G 937
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 670 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 727
Query: 60 ATDRG 64
A D G
Sbjct: 728 ARDHG 732
>gi|348531808|ref|XP_003453400.1| PREDICTED: protocadherin-8-like [Oreochromis niloticus]
Length = 915
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L ++A DPD G+N V Y G P F + SG + + +DFES+++YEF V
Sbjct: 260 LLDLNAEDPDEGLNGEVVYGFGHQVPPEIRQLFRVDRKSGRLTLESPVDFESKTTYEFDV 319
Query: 59 VATDRG 64
ATD G
Sbjct: 320 QATDLG 325
>gi|329112510|ref|NP_001192266.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Bos
taurus]
Length = 3314
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 562 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 620
Query: 61 TDRGK 65
D G+
Sbjct: 621 QDAGR 625
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1086 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYIIVVQAT 1143
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 878 ISASDDDVGENARITYLLEDN---LPQFRIDTDSGAITLQAPLDYEDQVTYTLAITARDN 934
Query: 64 G 64
G
Sbjct: 935 G 935
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 978 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1037
Query: 61 TDRG 64
DRG
Sbjct: 1038 VDRG 1041
>gi|431913398|gb|ELK15073.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Pteropus alecto]
Length = 2408
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 314 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 372
Query: 61 TDRGK 65
D G+
Sbjct: 373 QDAGR 377
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 838 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 895
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 730 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAMPVYELTAYA 789
Query: 61 TDRG 64
DRG
Sbjct: 790 VDRG 793
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 630 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQATLDYEDQVTYTLAITARDN 686
Query: 64 G 64
G
Sbjct: 687 G 687
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G NA + Y+L S T F + S +G + ++ LD ES Y F V A
Sbjct: 420 VIHIQAVDADHGENARLEYSLTGVASDTP-FVINSATGWVSVSGPLDRESVEHYFFGVEA 478
Query: 61 TDRG 64
D G
Sbjct: 479 RDHG 482
>gi|395817724|ref|XP_003782306.1| PREDICTED: protocadherin Fat 2 [Otolemur garnettii]
Length = 4316
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++ +A D D G + V+Y L P H F + S SG I Q+LD E+R +Y F V
Sbjct: 2817 VIQATAIDQDTGRDGQVSYRLSADPGSNIHELFAIDSESGWITTLQELDCETRQTYHFYV 2876
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2877 VAYDHGQTVQ 2886
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3341 ILTVSATDEDGPQNSAITYSLVGG-NQLGHFTIHPKKGELQVAKALDWEQTSSYSLRLRA 3399
Query: 61 TDRGK 65
TD G+
Sbjct: 3400 TDSGQ 3404
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 946 LDASDPDVGPAGEVRYVLMDDAHGT--FRVDLMTGALSLERELDFEKRAGYNLSLWASDS 1003
Query: 64 GK 65
G+
Sbjct: 1004 GR 1005
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y L +R+ F + SG + +A L+ R YE V+A D
Sbjct: 169 KVTATDADLGQNAEFYYALN---TRSEMFAIHPTSGVVTVAGTLNVTWREKYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2290 VIQLLASDQDSGKNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2349
Query: 60 ATDRG 64
A D+G
Sbjct: 2350 AMDKG 2354
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N + Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2088 LFQVSATDEDLGTNGAITYAFAED---YKYFRIDPYLGDISLKKPFDYQALNKYRLKVIA 2144
Query: 61 TDRG 64
D G
Sbjct: 2145 QDGG 2148
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L +++ E V A+D
Sbjct: 3136 VFARDPDQGTNAQVVYSLTDSAE--GHFSIDATTGVISLEKPLRVRPQAALELTVRASDL 3193
Query: 64 G 64
G
Sbjct: 3194 G 3194
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V Y+L + S F + ++ G I +AQ LD + + V A
Sbjct: 1573 LLQVRALDADRGANAEVRYSLLKGNSEA-FFNINALLGIITLAQKLDRANHVQHSLTVKA 1631
Query: 61 TDRG 64
D+G
Sbjct: 1632 EDQG 1635
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+E+ S++F V D+
Sbjct: 1786 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYETMPSFQFSVYVHDQ 1844
Query: 64 G 64
G
Sbjct: 1845 G 1845
>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
Length = 4981
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLMNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDSTSGQVALIGKLDYEATPAYSLVIEA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRLDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
ATDRG
Sbjct: 2231 ATDRG 2235
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETKSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLVLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREDQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDMGSPPQ 669
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELRVTQSLDRETKEHFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 VLTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSIRPLDREKVSHYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y++ S + F + S +G + +A+ LD+E +E + ATD
Sbjct: 3111 VSARDRDTAMNGLIKYSI-SSGNEEGIFAINSSTGVLTLAKALDYELCQKHEMTISATDG 3169
Query: 64 G 64
G
Sbjct: 3170 G 3170
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDTG 2441
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|312384516|gb|EFR29227.1| hypothetical protein AND_02014 [Anopheles darlingi]
Length = 741
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D G N +V Y + S + F + +G I + + LDFE+R +E VV
Sbjct: 264 VLQVYATDQDAGENGLVEYAINRRQSDKEQMFRIDPATGLISVNKPLDFETRELHELVVV 323
Query: 60 ATDRGKE 66
A DRG +
Sbjct: 324 AKDRGMQ 330
>gi|449278207|gb|EMC86141.1| Protocadherin Fat 4, partial [Columba livia]
Length = 4990
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + Y+L N F + S+ GE+ + +LD E+ S+Y VVA
Sbjct: 2075 VFKAQATDPDSGPNSYIEYSLLRP--LGNKFSIGSIDGEVRLTGELDREAVSNYTLTVVA 2132
Query: 61 TDRGK 65
TD+G+
Sbjct: 2133 TDKGQ 2137
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + S N F + SV+G I +A+ LD E + SY V +
Sbjct: 2179 LIQVFATDGDEGTNGQVRYAI-VSGDADNEFRIDSVTGVITVAKPLDREKKPSYTLTVQS 2237
Query: 61 TDRG 64
DRG
Sbjct: 2238 ADRG 2241
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G+N +++Y++ + + F + S +G++ + LD E+ +SY + A
Sbjct: 1235 VLRVSASDVDEGINGLIHYSVIKG-NEEKRFAIDSSTGQVTLVGKLDHEATASYLLVIQA 1293
Query: 61 TDRG 64
D G
Sbjct: 1294 VDSG 1297
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N + Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1445 VISVTAHDPDADINGQLTYAIIQQMPRGNHFRIDEVRGTIFTNAEIDREFANLFELTVKA 1504
Query: 61 TDR 63
TD+
Sbjct: 1505 TDQ 1507
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S T+ F + +G I LD E +++Y+ ++ATD
Sbjct: 717 VSATDPDLGPNGTVKYSI--SAGDTSRFQVHGQTGVITTKIALDREEKTAYQLQIMATDG 774
Query: 64 G 64
G
Sbjct: 775 G 775
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A D D G+N +NY + E + N F + +GEI + LD E S Y + A
Sbjct: 2695 ILTVAAVDRDSGLNGQLNYEIIEG-NMENSFSINRATGEIRSVRPLDREKLSQYTLTIKA 2753
Query: 61 TDRGKETQ 68
+D+G Q
Sbjct: 2754 SDKGTPLQ 2761
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1343 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1399
Query: 62 DRGK 65
D+G+
Sbjct: 1400 DQGR 1403
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V++SD D NA+++Y L S+ F + +G+I + LD ESR +Y VVA
Sbjct: 2389 ILLVNSSDADASTNAVISYKLTGGDSQ---FTINPSTGQIITSALLDRESRENYTLVVVA 2445
Query: 61 TDRG 64
+D G
Sbjct: 2446 SDGG 2449
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y + S + F + + +G + +A+ LDFE +E V ATD
Sbjct: 3119 VSAQDRDAAMNGLIRYNI-SSGNEAGIFAINTTTGTLTLAKPLDFELCQKHELVVTATDG 3177
Query: 64 G 64
G
Sbjct: 3178 G 3178
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P F + +G I + LD + SY+ ++A
Sbjct: 918 IFQAKAVDPDEGVNGMVLYSLKQNPK--GLFSINEQTGAISLIGPLDINA-GSYQVEILA 974
Query: 61 TDRG 64
+D G
Sbjct: 975 SDMG 978
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+++A D D G NA+V YT+ + F++ SG++ + LD E RS Y V A
Sbjct: 1765 ILQLTAMDADEGANALVTYTIISGAD--DSFHIDPESGDLIATKRLDRERRSKYSLLVRA 1822
Query: 61 TD 62
D
Sbjct: 1823 DD 1824
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D G+N + YT+ E F++ V+G + + LD+E++ Y V A D
Sbjct: 1869 ILATDDDSGINGEITYTVSED-DEEGMFFLNPVTGVFNLTRALDYEAQQYYILTVRAEDG 1927
Query: 64 GKE 66
G +
Sbjct: 1928 GGQ 1930
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D GVN + Y++ E T + G++ I +LD E + Y VVA
Sbjct: 1021 FFKVQASDKDSGVNGEIAYSIIEG--NTGDAFGIFPDGQLYIKSELDRELQERYILLVVA 1078
Query: 61 TDRGKE 66
+DR E
Sbjct: 1079 SDRAVE 1084
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-------FYMKSVSGEICIAQDLDFESRSS 53
+L+V+A+D D G NA + Y L F + SG I I + LD+E R
Sbjct: 227 VLQVAAADADEGTNADIRYRLEGGDGGGGGEGAGSLPFEVDPESGVIRIRECLDYEMRQQ 286
Query: 54 YEFPVVATDRG 64
Y V A DRG
Sbjct: 287 YSLTVQAMDRG 297
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-------------SPSRTNHFYMKSVSGEICIAQDLD 47
+L +SA+D D G N V ++L E +P R F + VSG++ LD
Sbjct: 597 LLVLSATDGDLGDNGTVRFSLQEAEPALAVVGPSSVTPRRV--FRLDPVSGKLSTISQLD 654
Query: 48 FESRSSYEFPVVATDRG 64
E ++ + V+ATD G
Sbjct: 655 REEQAHFSLQVLATDLG 671
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R++A+D D G NA++ Y + S S + F + +G I LD+E++ SY V A
Sbjct: 3221 VIRLNATDADSGPNAVIAYAIQSSDS--DLFVIDPNTGTITTQGFLDYETKQSYHLMVKA 3278
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D GVNA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2801 RVTTSDEDIGVNAVSRYSIRDT---SLPFTINPSTGDITISRPLNREDTDRYRIRVSAHD 2857
Query: 63 RG 64
G
Sbjct: 2858 SG 2859
>gi|149020622|gb|EDL78427.1| FAT tumor suppressor homolog 3 (Drosophila) [Rattus norvegicus]
Length = 2306
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S S F + S SG I + Q LD E +SSY V A
Sbjct: 900 LTRVQAVDPDVGINRKVVYSLEDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRA 957
Query: 61 TDR 63
TD+
Sbjct: 958 TDQ 960
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V A D D G N V Y+L S S F + S +G I +DLD E+ ++ F
Sbjct: 583 LAQVRAIDTDWGANGQVTYSL-HSDSHLEKVMEAFNIDSNTGWISTLKDLDHETDPTFSF 641
Query: 57 PVVATDRGK 65
VVA+D G+
Sbjct: 642 FVVASDLGE 650
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ ++D D G N +V+Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 56 VLQLVSTDADSGNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVT 115
Query: 60 ATDRG 64
ATD G
Sbjct: 116 ATDNG 120
>gi|194757998|ref|XP_001961249.1| GF13772 [Drosophila ananassae]
gi|190622547|gb|EDV38071.1| GF13772 [Drosophila ananassae]
Length = 3584
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V+ASDPD G+N + Y LG+ F + SG I + LD ES + Y +A
Sbjct: 1025 VIQVAASDPDVGLNGRIKYLLGDRDVEDGSFVIDPTSGTIRTNKGLDRESVAVYHLTAIA 1084
Query: 61 TDRG 64
D+G
Sbjct: 1085 VDKG 1088
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSA+D D GVNA + Y+L E + F + S +G I + LD E+ S Y
Sbjct: 915 VLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINSQTGAIVTSAPLDRETTSGYLL 974
Query: 57 PVVATDRG 64
V A D G
Sbjct: 975 TVTAKDGG 982
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D G NA + Y + +++ F + S+SG++ + + LD+ES SY + A D
Sbjct: 605 IRATDADQGNNAAIRYAIIGGNTQS-QFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDG 663
Query: 64 GKETQ 68
G ++
Sbjct: 664 GSPSR 668
>gi|354500154|ref|XP_003512167.1| PREDICTED: protocadherin-3-like [Cricetulus griseus]
Length = 796
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G++ V Y+L + + F + V+GEI ++++LDFE + Y + A
Sbjct: 261 VLTVSAMDLDAGIHGNVVYSLFQGGGASQPFAIHGVTGEIRLSKELDFEVTNHYNIEIAA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDGG 324
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P+ + S+ +G++ + LD+E+ ++EF
Sbjct: 472 ISATDSDSGSNAHITYSL--LPTHDPQLALSSLISINADNGQLFALRALDYEALQTFEFR 529
Query: 58 VVATDRG 64
V ATD+G
Sbjct: 530 VGATDQG 536
>gi|301621392|ref|XP_002940039.1| PREDICTED: protocadherin gamma-B1-like [Xenopus (Silurana)
tropicalis]
Length = 900
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH---FYMKSVSGEICIAQDLDFESRSSYEFP 57
+L V A+D D G+NA + Y+ ++ H F + SG+I +DLDFES SYE
Sbjct: 263 VLSVDATDKDEGLNAQITYSFSKTSDNQLHTGTFDINPTSGKITTKRDLDFESVQSYEIA 322
Query: 58 VVATDRG 64
+ A D G
Sbjct: 323 IEAMDGG 329
>gi|297295319|ref|XP_001092936.2| PREDICTED: protocadherin Fat 4-like [Macaca mulatta]
Length = 1704
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+VSA+D D G+N+ + Y+ RT + + S SGEI + LDFE Y V
Sbjct: 1129 VLQVSATDQDEGINSEITYSF----YRTGQIFGLNSKSGEIITQKKLDFEETKEYSMIVE 1184
Query: 60 ATDRG 64
D G
Sbjct: 1185 GRDGG 1189
>gi|127138919|ref|NP_001026791.2| protocadherin gamma-A8 precursor [Pan troglodytes]
gi|62510865|sp|Q5DRB2.1|PCDG8_PANTR RecName: Full=Protocadherin gamma-A8; Short=PCDH-gamma-A8; Flags:
Precursor
Length = 932
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
>gi|296193285|ref|XP_002806645.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Callithrix
jacchus]
Length = 4349
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L PS H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPSSNVHELFAIDSESGWITTLQELDCETCQTYNFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGRTIQ 2885
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLVGG-NQLGHFIIHPKKGELQVAKALDWEQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N + YT E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAITYTFAED---YTYFRIDPYLGDISLRKPFDYQALNKYRLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + +G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDDAHGT--FRVDLTTGALSLERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V YTL + + F + ++ G I +A+ LD+ + + + V A
Sbjct: 1574 LLQVRAMDADRGANAEVRYTLLKG-NGEGFFNINALLGIITLARKLDWANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ESR S++F V D+
Sbjct: 1787 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESRPSFKFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +GE+ LD E + + V A
Sbjct: 3030 ILKVSATDLDADTNAQITYSL-HGPG-AHEFKLDPHTGELTTLTPLDRERKDVFNLVVKA 3087
Query: 61 TDRG 64
TD G
Sbjct: 3088 TDGG 3091
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGPNAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + IA LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTIAAPLDYETTNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|432847518|ref|XP_004066062.1| PREDICTED: protocadherin Fat 1-like [Oryzias latipes]
Length = 4558
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + SV G + +A++LD SR+++E + A
Sbjct: 1260 VLQVTALDKDTGHNAEVVYSI-ESGNVANCFAIDSVLGTVTVAKELDRSSRTAFELVLKA 1318
Query: 61 TDRG 64
TD G
Sbjct: 1319 TDNG 1322
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + SV G + +A++LD SR+++E + A
Sbjct: 1509 VLQVTALDKDTGHNAEVIYSI-ESGNVANCFAIDSVLGTVTVAKELDRSSRTAFELVLKA 1567
Query: 61 TDRG 64
TD G
Sbjct: 1568 TDNG 1571
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + ASD DC NA + Y + E P N+F + S +G I I LD+E RS + F V
Sbjct: 1720 LVIHASDADCDQNARLIYQIVE-PYAHNYFAIDSSTGAIRITTTLDYEERSVFHFTVQVH 1778
Query: 62 DRG 64
D G
Sbjct: 1779 DLG 1781
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A DPD G ++ V Y+L ++ F + +SG + I Q+LD+E++ Y A
Sbjct: 944 IMWLEAHDPDIGPSSQVRYSLTDNGD--GKFEVDKLSGALRIVQNLDYETKQVYNLTAKA 1001
Query: 61 TDRGK 65
D+GK
Sbjct: 1002 KDKGK 1006
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G N Y+ E T+ F + SG + + LD+ YE ++A D
Sbjct: 168 KVTATDADIGTNGEYYYSFRE---WTDMFAVHPTSGVVTLTGKLDYSETKLYELEILAVD 224
Query: 63 RG 64
RG
Sbjct: 225 RG 226
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFP 57
+++V A+D D G N+ V Y+L + F + SV +G + ++LD E Y
Sbjct: 2756 VVQVRATDLDSGTNSHVIYSLDPKQNSQEIFELFSVNSETGWVTTLKELDREKMDKYTIA 2815
Query: 58 VVATDRGKETQ 68
V+ATD+G Q
Sbjct: 2816 VLATDQGDTIQ 2826
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+ D NA ++Y++ S + F + + SG+I + + LD+E+ Y + A
Sbjct: 3178 LLRVQAASRDKEANAEISYSI-ISGNEHGMFSVDARSGDIFVIEPLDYETSHEYYITIEA 3236
Query: 61 TDRG 64
TD G
Sbjct: 3237 TDGG 3240
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A+D D G+N+ + Y+L S + F + SG I + + LD E +S YE A D
Sbjct: 3076 KLLANDADAGLNSDILYSLINSADGS--FSVDENSGVISLERPLDREVQSVYELTAQAID 3133
Query: 63 RG 64
RG
Sbjct: 3134 RG 3135
>gi|14270484|ref|NP_114477.1| protocadherin gamma-A8 isoform 1 precursor [Homo sapiens]
gi|37999835|sp|Q9Y5G5.1|PCDG8_HUMAN RecName: Full=Protocadherin gamma-A8; Short=PCDH-gamma-A8; Flags:
Precursor
gi|5456950|gb|AAD43722.1| protocadherin gamma A8 [Homo sapiens]
gi|119582336|gb|EAW61932.1| hCG1982215, isoform CRA_k [Homo sapiens]
gi|182888335|gb|AAI60101.1| Protocadherin gamma subfamily A, 8 [synthetic construct]
Length = 932
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
Length = 4915
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2037 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2094
Query: 61 TDRGK 65
TD+G+
Sbjct: 2095 TDKGQ 2099
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G+N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGLNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSVMKG-NEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2141 IIQVYAADGDEGTNGQVRYGIVDG-NANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQA 2199
Query: 61 TDRG 64
TDRG
Sbjct: 2200 TDRG 2203
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ +VA
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFTINEKNGNISLLGPLDVHA-GSYQIEIVA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLVLRATDRDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTVTSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3183 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3240
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2247 ILQVVARDDDQGPNSKLSYVLFGG-NEDNAFTL-SASGELQVTQSLDRETKEHFVLMITA 2304
Query: 61 TDRG 64
TD G
Sbjct: 2305 TDSG 2308
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + ++ + F + +GEI + LD E S Y + +
Sbjct: 2657 ILTVSAMDKDSGPNGQLDYEIVNG-NKEHSFTINHATGEIRSIRSLDREKISQYVLTIKS 2715
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2716 SDKGSPSQ 2723
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y++ S + F + S +G + +A+ LD+E +E + ATD
Sbjct: 3081 VSARDRDAAMNGLIRYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHEMTITATDG 3139
Query: 64 G 64
G
Sbjct: 3140 G 3140
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+++Y + S+ F + +G+I + LD E++ +Y VV+
Sbjct: 2351 VLLVNASDADASTNAVISYRIIGGNSQ---FTINPSTGQIITSALLDRETKENYTLVVVS 2407
Query: 61 TDRG 64
+D G
Sbjct: 2408 SDAG 2411
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1831 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRALDYEAQQYYILTVRAEDG 1889
Query: 64 GKE 66
G +
Sbjct: 1890 GGQ 1892
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D GVNA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2763 RVTTSDEDIGVNAISRYSITDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2819
Query: 63 RG 64
G
Sbjct: 2820 SG 2821
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1727 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1784
Query: 61 TD 62
D
Sbjct: 1785 DD 1786
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSS--------Y 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2863 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGTSNVNINRH 2919
Query: 55 EFPVVATDRGK 65
F V ++DRG
Sbjct: 2920 SFIVTSSDRGN 2930
>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
Length = 4981
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y VVA
Sbjct: 602 LLILRATDRDLGDNGTVGFSLQEAETDQRSFRLDPVSGRLSTVSSLDREEQAFYSLLVVA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGPNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + + G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFGIDEIKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFSIDSSSGQVALIGKLDYETTPAYSLIIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y + A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTLQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGNISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2173 IIQVFAADGDEGTNGQVRYGI-VGGNANQEFRIDSVTGAITVAKPLDREKTPTYLLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD ES+ + V A
Sbjct: 2279 ILQVVARDDDQGSNSKISYVLFGG-NEDNAFTL-SASGELRVIQSLDRESKEQFVLTVTA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + + N F + +GEI + LD E S Y V +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVKG-NEENSFSINHATGEIRSIRPLDREKVSQYMLTVKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLLVVA 1072
Query: 61 TDRGKE 66
DR E
Sbjct: 1073 FDRAVE 1078
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LDFE++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRVLDFEAQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY-------- 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2893 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQILKYQNVSGFSNANINRH 2949
Query: 55 EFPVVATDRGK 65
F V ++DRG
Sbjct: 2950 SFIVTSSDRGN 2960
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
>gi|345320248|ref|XP_001517550.2| PREDICTED: protocadherin gamma-A7-like, partial [Ornithorhynchus
anatinus]
Length = 585
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+A+DPD GVN V Y+ + +T+ F++ S +GE+ I +LDFE YE +
Sbjct: 166 VVTVNATDPDEGVNGHVTYSFRKITDKTSRIFHLNSTTGEVSILANLDFEESEFYEMEIQ 225
Query: 60 ATDRG 64
+ D G
Sbjct: 226 SRDGG 230
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD GVN++ NY L SP+R HF + SG E+ + + LD E + Y +
Sbjct: 62 AHDPDMGVNSLQNYQL--SPNR--HFSLDVQSGADGTKNAELVLERALDREEEAVYHLIL 117
Query: 59 VATDRG 64
A+D G
Sbjct: 118 TASDGG 123
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ RV+A DPD NA V Y++ G+ P +++ + S +G + + D+E +
Sbjct: 376 VFRVTARDPDSEENARVTYSISEKPGQGPPLSSYLSINSETGVLYALRSFDYEQFRELQL 435
Query: 57 PVVATDRGKET 67
V A D G T
Sbjct: 436 LVTAQDGGTPT 446
>gi|291221758|ref|XP_002730887.1| PREDICTED: FAT tumor suppressor homolog 4-like [Saccoglossus
kowalevskii]
Length = 4161
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFE--SRSSYEFPV 58
+ V+A+DPD G N V+Y+L T F + ++GE+ I Q LD+E Y F V
Sbjct: 1563 LFTVTATDPDAGSNGDVSYSL-----NTTDFAVDEITGEVSINQSLDYEDGDNRKYTFQV 1617
Query: 59 VATDRG 64
A DRG
Sbjct: 1618 FAADRG 1623
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSS--YEFPV 58
+ V+ASDPD G N + ++L T F + +GEI + LDFE + YEF V
Sbjct: 1246 LFTVTASDPDVGSNCDIVFSL-----DTLDFAINDTTGEISTSTSLDFEDEDNRIYEFYV 1300
Query: 59 VATDRGK 65
ATD+G+
Sbjct: 1301 FATDQGE 1307
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSS--YEFPV 58
+ V+ASDPD G N+ + + L T F + +G++ LD+E + YEF V
Sbjct: 926 LFTVTASDPDVGRNSNILFRL-----NTTDFAINDTTGDVLTTTVLDYEDEENRIYEFQV 980
Query: 59 VATDRGK 65
A+D+G+
Sbjct: 981 FASDQGE 987
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 4 VSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+ A D D +NA + Y+ +G S + F + + SGEI +A +LD E++S+Y + +D
Sbjct: 1145 IHADDEDIDINARLTYSVIGGSDGK---FVVDADSGEILVASNLDRETKSAYTINMSVSD 1201
Query: 63 RGK 65
G+
Sbjct: 1202 SGE 1204
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICI-AQDLDFE--SRSSYEFP 57
+L V A+D D G+NA V+Y S F + ++G+I + D DFE + +YEF
Sbjct: 605 VLTVRATDDDDGINANVSYYTSSS-----DFSIDPITGDITTNSTDYDFEDNGKLNYEFT 659
Query: 58 VVATDRG 64
V A D+G
Sbjct: 660 VYANDQG 666
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQ-----DLDFESRSSYE 55
M + A+D D +NA V Y+L S ++ F + ++G I A DLD E + +YE
Sbjct: 390 MPLIEATDADIDLNAAVVYSL--SGDGSDQFQIDEITGIITTADNENVLDLDREIQDTYE 447
Query: 56 FPVVATDRGKE 66
V A D G +
Sbjct: 448 LTVTAADMGGD 458
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEIC-----IAQDLDFESRSSYEFPV 58
+ SD D G+NA + YTL S + F + ++SG I A +LD E+ YE V
Sbjct: 715 IEVSDADTGLNAAIVYTLAGEGS--DQFQIDNISGIITTSDNDTALNLDREAIDQYELVV 772
Query: 59 VATDR 63
A DR
Sbjct: 773 TACDR 777
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A D D G N + YT + +F++ + +GEI I ++LD + + F V A
Sbjct: 3478 VITVLAVDSDSGENGRITYT-----TNVEYFHLDNETGEITIQKELD--TSKDFTFTVNA 3530
Query: 61 TDRG 64
+D G
Sbjct: 3531 SDNG 3534
>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
Length = 4982
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y VVA
Sbjct: 602 LLILRATDRDLGDNGTVGFSLQEAETDQRSFRLDPVSGRLSTVSSLDREEQAFYSLLVVA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGPNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + + G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFGIDEIKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFSIDSSSGQVALIGKLDYETTPAYSLIIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y + A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTLQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGNISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2173 IIQVFAADGDEGTNGQVRYGI-VGGNANQEFRIDSVTGAITVAKPLDREKTPTYLLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD ES+ + V A
Sbjct: 2279 ILQVVARDDDQGSNSKISYVLFGG-NEDNAFTL-SASGELRVIQSLDRESKEQFVLTVTA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + + N F + +GEI + LD E S Y V +
Sbjct: 2689 ILTVSAMDKDSGPNGQLDYEIVKG-NEENSFSINHATGEIRSIRPLDREKVSQYMLTVKS 2747
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2748 SDKGSPSQ 2755
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3215 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3272
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLLVVA 1072
Query: 61 TDRGKE 66
DR E
Sbjct: 1073 FDRAVE 1078
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LDFE++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRVLDFEAQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY-------- 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2895 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQILKYQNVSGFSNANINRH 2951
Query: 55 EFPVVATDRGK 65
F V ++DRG
Sbjct: 2952 SFIVTSSDRGN 2962
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
>gi|71725377|ref|NP_001025159.1| protocadherin Fat 2 precursor [Mus musculus]
gi|81888837|sp|Q5F226.1|FAT2_MOUSE RecName: Full=Protocadherin Fat 2; AltName: Full=FAT tumor suppressor
homolog 2; Flags: Precursor
gi|148701548|gb|EDL33495.1| mCG1445 [Mus musculus]
Length = 4351
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S SG I Q+LD E++ +Y F V
Sbjct: 2818 VIQVTANDQDTGSDGQVSYRLSVEPGSNIHQLFAVDSESGWITTLQELDCETQQTYRFYV 2877
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2878 VAFDHGQTIQ 2887
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSASD D VN+++ Y+L ++ HF + G++ +A+ LD+E SY + A
Sbjct: 3342 ILTVSASDDDGPVNSVITYSLVGG-NQLGHFTIDPKKGKLQVAKALDWEQTPSYSLRIRA 3400
Query: 61 TDRGK 65
TD G+
Sbjct: 3401 TDSGQ 3405
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E+ + V
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEMFTIQELDYEAHQHFRVKVR 2350
Query: 60 ATDRG 64
ATDRG
Sbjct: 2351 ATDRG 2355
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y A+D
Sbjct: 947 LDASDPDLGPAGEVKYILVDDVHGT--FRVDPMTGALSLEKELDFERRAGYNLSFWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD GVNA V Y+L +S F + + SG I + + L S S+ E V A+D
Sbjct: 3137 VFARDPDQGVNAQVVYSLTDSAD--GQFSIDATSGVIRLEKPLQVRSSSAVELTVRASDL 3194
Query: 64 G 64
G
Sbjct: 3195 G 3195
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y +R+ F + SG + +A L+ R YE V+A D
Sbjct: 169 KVTATDADLGQNAEFYYAFN---ARSEVFAIHPTSGVVTVAGKLNVTWRGKYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E + +F + G+I + + D+++ + Y V A
Sbjct: 2089 LFQVSATDKDLGANGTVTYGFAEDYA---YFRIDPYVGDISLKKPFDYQALNKYHLRVTA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDAG 2149
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V+Y+ + S F + S+ G I +AQ LD + + V A
Sbjct: 1574 LLQVRAVDADRGANAEVHYSFLKGNSE-GFFNIDSLLGIITVAQRLDHVHLNRHALTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
>gi|348581860|ref|XP_003476695.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Cavia porcellus]
Length = 3309
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 554 VLRVTATDQDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYVLRIRA 612
Query: 61 TDRGK 65
D G+
Sbjct: 613 QDAGR 617
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1078 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1135
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 870 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 926
Query: 64 G 64
G
Sbjct: 927 G 927
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 970 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1029
Query: 61 TDRG 64
DRG
Sbjct: 1030 VDRG 1033
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 660 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGSLDRESVEHYFFGVE 717
Query: 60 ATDRG 64
A D G
Sbjct: 718 ARDYG 722
>gi|7662056|ref|NP_054723.1| protocadherin gamma-A8 isoform 2 precursor [Homo sapiens]
gi|5457078|gb|AAD43775.1|AF152515_1 protocadherin gamma A8 short form protein [Homo sapiens]
gi|119582346|gb|EAW61942.1| hCG1982215, isoform CRA_u [Homo sapiens]
gi|156230946|gb|AAI52416.1| Protocadherin gamma subfamily A, 8 [Homo sapiens]
gi|168278567|dbj|BAG11163.1| protocadherin gamma A8 precursor [synthetic construct]
Length = 820
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
>gi|395817387|ref|XP_003782153.1| PREDICTED: protocadherin gamma-C4 [Otolemur garnettii]
Length = 832
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + ++G++ + LDFES + YEF V
Sbjct: 261 LVQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPITGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|345311430|ref|XP_001516340.2| PREDICTED: protocadherin gamma-B7-like [Ornithorhynchus anatinus]
Length = 834
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D GVNA + ++ H F + VSGEI + LDFE + Y+ V
Sbjct: 261 VLRVEATDRDEGVNAQITFSFSSIEDTARHVFSLDPVSGEIVTKRILDFEEANRYKMDVE 320
Query: 60 ATDRGKET 67
ATD G T
Sbjct: 321 ATDGGGLT 328
>gi|326673321|ref|XP_003199838.1| PREDICTED: protocadherin alpha-7-like [Danio rerio]
Length = 792
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV+A+D D G N +V Y+LG + F + V+GEI + LDFE + YE +
Sbjct: 263 ILRVNATDLDEGQNGVVVYSLGHDVNDKLRKLFNVNPVTGEIVVTGLLDFEVKDIYEIDI 322
Query: 59 VATDRG 64
A+D+G
Sbjct: 323 QASDKG 328
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G N+ V+Y + N F + S +GEI + DFE+ +++F
Sbjct: 477 LFSVSASDKDTGANSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFETSKTFQF 536
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 537 HILATDSG 544
>gi|262263278|tpg|DAA06580.1| TPA_inf: protocadherin beta 3 [Anolis carolinensis]
Length = 807
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G NA + Y+ P + N F + VSGEI + ++D+E +SY + AT
Sbjct: 259 KVEARDMDFGSNAQITYSFHRMPEKIHNLFNLNEVSGEITVVGEIDYEKETSYAMNIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|410352061|gb|JAA42634.1| protocadherin gamma subfamily A, 8 [Pan troglodytes]
Length = 934
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
Length = 4983
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIVKG-NEERQFAIDSTSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
ATDRG
Sbjct: 2231 ATDRG 2235
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFTINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3215 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3272
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2689 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSHYVLTIKS 2747
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2748 SDKGSPSQ 2755
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKERFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+++Y + S+ F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVISYRIIGGNSQ---FTINPSTGQIITSALLDRETKDNYTLVVVC 2439
Query: 61 TDRG 64
+D G
Sbjct: 2440 SDAG 2443
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2795 RVTTSDEDVGINAISRYSIMDA---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2851
Query: 63 RG 64
G
Sbjct: 2852 SG 2853
>gi|383855810|ref|XP_003703403.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Megachile rotundata]
Length = 4739
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+DPD G V Y L ++ F + VSG I Q LDFE R + VVA DR
Sbjct: 1009 VDATDPDEGAGGDVEYFLSDAMESEGFFKVDKVSGTIRTVQSLDFEERQVHTLTVVARDR 1068
Query: 64 GK 65
G+
Sbjct: 1069 GE 1070
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+VS+ D D G+N V Y + ++ + T+ F++ G I + + LD E+ S+ F V+
Sbjct: 2360 VLKVSSRDNDTGINQQVRYAIQNDTENSTDLFHIDPEEGVIFLKRSLDHEAHESHHFTVI 2419
Query: 60 ATDRG 64
A DRG
Sbjct: 2420 AIDRG 2424
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A D D G N + Y+ E T+ F + VSG I + + L + R+ +E V+A
Sbjct: 204 ILRVMAEDADLGRNGEIYYSFAE---ETDQFAVHPVSGVITLTRPLRYSERAIHELVVLA 260
Query: 61 TDRG 64
DRG
Sbjct: 261 KDRG 264
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ A D D G N V Y+ G N F + + +G I LD E + Y+F VV
Sbjct: 2879 ILKIIAHDDDLGSNGEVRYSFGTDIGELANVFTVDAYTGWISTLVQLDKEKQPEYKFQVV 2938
Query: 60 ATDRG 64
ATD G
Sbjct: 2939 ATDNG 2943
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A D D +NA++NY + E R +F++ S +G I LD ES + F V +
Sbjct: 1846 LVIKAEDADSELNALLNYDIVEDLPR-KYFHIDSSTGAIRTVMVLDHESIPKFTFHVKVS 1904
Query: 62 DRGK 65
D GK
Sbjct: 1905 DLGK 1908
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R +A+D D G NA V Y+L + TN F + V+G + + LD E + YE + A
Sbjct: 898 VWRANATDADTGENARVTYSL---VTETNDFRVDPVTGVLSVFGRLDRERQEIYELRIRA 954
Query: 61 TDRG 64
D G
Sbjct: 955 RDNG 958
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+D D G V YT+ S F + ++GEI + LD E + YE PV+ATD
Sbjct: 2571 VIANDEDFGDYGTVIYTIA-SDLMKEIFDINRLTGEIVTRKKLDREEQKLYEIPVMATDG 2629
Query: 64 G 64
G
Sbjct: 2630 G 2630
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+ D GVNA V Y++ + F + + SG I IA+ LD+E Y + A D
Sbjct: 3297 RVLATSKDTGVNADVYYSI-VGGNEHKKFQIDARSGVITIAEQLDYERARDYFLTIQAID 3355
Query: 63 RG 64
G
Sbjct: 3356 GG 3357
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+D D G+N + Y +S F + + SG + + + LD E+++ Y + A D
Sbjct: 3193 KVHATDDDIGINRKIRYEFIDSAD--GQFLIAADSGIVTLGKSLDRETKAMYNVTIQALD 3250
Query: 63 RG 64
+G
Sbjct: 3251 QG 3252
>gi|18087751|ref|NP_291061.1| protocadherin gamma subfamily C, 5 precursor [Mus musculus]
gi|13876364|gb|AAK26102.1| protocadherin gamma C5 [Mus musculus]
gi|22164116|gb|AAM93564.1| protocadherin gamma C-V [Mus musculus]
gi|148678176|gb|EDL10123.1| mCG133388, isoform CRA_f [Mus musculus]
gi|223460719|gb|AAI38679.1| Pcdhgc5 protein [Mus musculus]
gi|223461058|gb|AAI38678.1| Protocadherin gamma subfamily C, 5 [Mus musculus]
Length = 944
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S T N F + SG I + +DFE + YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSETVKNLFGLDPSSGAIHVLGPVDFEESNFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
SA DPD G N + YTL SP+ ++K++ E+ + Q LD E+++ ++ +
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPNSHFSLHVKTLKDGKLFPELVLEQQLDRETQARHQLVLT 213
Query: 60 ATDRG 64
A D G
Sbjct: 214 AVDGG 218
>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
Length = 4981
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDSTSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
ATDRG
Sbjct: 2231 ATDRG 2235
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFTINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSHYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 VLQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKERFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
Length = 4980
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I + ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFGIDEVKGTIFTSAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G+N + Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGLNGTIKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSVMKG-NEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG++ LD E ++ Y V+A
Sbjct: 602 LLVLRATDRDLGDNGTVRFSLQEAETDQRSFRLDPVSGKLSTIASLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFTINEKNGNISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2173 IIQVYAADGDEGTNGQVRYGIVDG-NANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQA 2231
Query: 61 TDRG 64
DRG
Sbjct: 2232 ADRG 2235
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTIQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N +++Y++ S + F + S +G + +A+ LD+E +E + ATD
Sbjct: 3111 VSARDRDAAMNGLISYSI-SSGNEEGIFAINSSTGVLTLAKALDYELCQKHEMTISATDG 3169
Query: 64 G 64
G
Sbjct: 3170 G 3170
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELRVIQSLDRETKEHFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV+
Sbjct: 2383 VLLVNASDADASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKENYTLVVVS 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY-------- 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2893 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2949
Query: 55 EFPVVATDRGK 65
F V ++DRG
Sbjct: 2950 SFIVTSSDRGN 2960
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + ++ + F + +GEI + LD E Y + +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNG-NKEHSFAINHATGEIRSIRPLDREKIPQYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAVSRYSITDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|165932370|ref|NP_078858.4| protocadherin Fat 4 precursor [Homo sapiens]
gi|172046149|sp|Q6V0I7.2|FAT4_HUMAN RecName: Full=Protocadherin Fat 4; Short=hFat4; AltName:
Full=Cadherin family member 14; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
ATDRG
Sbjct: 2231 ATDRG 2235
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSHYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDRGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKERFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDA---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|426345436|ref|XP_004040420.1| PREDICTED: protocadherin Fat 4 [Gorilla gorilla gorilla]
Length = 4981
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ VVATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQVVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDSTSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
ATDRG
Sbjct: 2231 ATDRG 2235
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKERFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSHYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDA---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|40789237|ref|NP_446385.1| protocadherin alpha-4 precursor [Rattus norvegicus]
gi|81911821|sp|Q767I8.1|PCDA4_RAT RecName: Full=Protocadherin alpha-4; Short=PCDH-alpha-4; AltName:
Full=Cadherin-related neuronal receptor 4; Flags:
Precursor
gi|40645524|dbj|BAD06369.1| cadherin-related neuronal receptor 4 [Rattus norvegicus]
gi|50512330|gb|AAT77560.1| protocadherin alpha 4 [Rattus norvegicus]
gi|149017277|gb|EDL76328.1| rCG49388, isoform CRA_a [Rattus norvegicus]
Length = 947
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D G N V Y+ SP+ N F++ V+GEI + +DFE +SYE +
Sbjct: 261 VVKVNASDLDEGANGEVMYSFSTDISPNVKNKFHIDPVTGEIAVKGYIDFEECTSYEILI 320
Query: 59 VATDRGK 65
D+G+
Sbjct: 321 EGIDKGQ 327
>gi|395520507|ref|XP_003764370.1| PREDICTED: protocadherin Fat 3 isoform 1 [Sarcophilus harrisii]
Length = 4557
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+DPD G+N V Y+L +S +F + S SG I + Q LD E +SSY V A
Sbjct: 3150 LTRVQATDPDLGINRKVVYSLADSAG--GYFSVDSSSGIIILEQPLDRELQSSYNISVKA 3207
Query: 61 TDR 63
+D+
Sbjct: 3208 SDQ 3210
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFP 57
+++V A D D G N V Y L SP + F + S +G I +DLD E ++ F
Sbjct: 2833 LIQVKAIDRDWGANGQVTYALHSDSSPEKIMEVFSIDSNTGWISTLKDLDHERDPTFAFS 2892
Query: 58 VVATDRGK 65
VVA+D G+
Sbjct: 2893 VVASDLGE 2900
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V YTL F + SG I ++++LD+E + Y V A D+G+
Sbjct: 962 DPDLGLGGQVRYTLVND--YNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGR 1017
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + ++ + T++F++ S SG I A+ LD ES V
Sbjct: 2306 VLQVVASDADSENNKVVQYQIVQDTYNSTDYFHIDSTSGLILTARMLDHESVQQSTLKVR 2365
Query: 60 ATDRG 64
ATD G
Sbjct: 2366 ATDNG 2370
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y++ + F + S +G + +A LD ES+++Y + A
Sbjct: 850 IIQVEARDKDLGSNGEVTYSV---LTDAQQFSINSSTGIVYVADQLDRESKANYSLKIEA 906
Query: 61 TDRGKETQ 68
DR + Q
Sbjct: 907 RDRSESGQ 914
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ SY V A
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVIYTADILDRETTGSYWLTVYA 1120
Query: 61 TDRG 64
TDRG
Sbjct: 1121 TDRG 1124
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA D D G N + Y+L S N F++ SGE+ LD E Y A
Sbjct: 3048 ILKISAKDADIGPNGDIRYSL--YGSGNNKFFLDPESGELKTLALLDREKIPVYNLVARA 3105
Query: 61 TDRG 64
TD G
Sbjct: 3106 TDGG 3109
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEFPVV 59
+L VSASD D G N + Y++ + F + +G I ++LDFES +Y F V
Sbjct: 491 VLSVSASDKDKGENGYITYSIASLSALP--FSINQFTGVIRTTEELDFESSPENYRFIVR 548
Query: 60 ATDRG 64
A+D G
Sbjct: 549 ASDWG 553
>gi|355691691|gb|EHH26876.1| hypothetical protein EGK_16955 [Macaca mulatta]
Length = 820
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
Length = 4980
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G+N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGLNGTVRYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 LDRG 329
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSVIKG-NEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2173 IIQVYAADGDEGTNGQVRYGIIDG-NANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLVLGATDRDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTVASLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYAIVQQMPRGNHFGIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGNISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E+++ + V A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELRVIQSLDRETKAHFVLMVTA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + ++ + F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNG-NKEHSFTINHATGEIRSIRPLDREKVSQYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV+
Sbjct: 2383 VLLVNASDADASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKENYTLVVVS 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y++ S + F + S +G + +A+ LD+E +E + ATD
Sbjct: 3111 VSARDRDAAMNGLIRYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHEMTISATDG 3169
Query: 64 G 64
G
Sbjct: 3170 G 3170
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY-------- 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2893 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2949
Query: 55 EFPVVATDRGK 65
F V ++DRG
Sbjct: 2950 SFIVTSSDRGN 2960
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
Length = 4981
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIVKG-NEERQFAIDSTSGQVALIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
ATDRG
Sbjct: 2231 ATDRG 2235
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFTINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSHYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKERFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDVGINAISRYSIMDA---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|12621132|ref|NP_075243.1| protocadherin Fat 2 precursor [Rattus norvegicus]
gi|22095688|sp|O88277.1|FAT2_RAT RecName: Full=Protocadherin Fat 2; AltName: Full=Multiple epidermal
growth factor-like domains protein 1; Short=Multiple
EGF-like domains protein 1; Flags: Precursor
gi|3449286|dbj|BAA32458.1| MEGF1 [Rattus norvegicus]
Length = 4351
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S SG I Q+LD E++ +Y F V
Sbjct: 2818 VIQVTANDQDTGSDGQVSYRLSVEPGSNIHELFAVDSESGWITTLQELDCETQQTYRFYV 2877
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2878 VAFDHGQTIQ 2887
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSASD D VN+ + Y+L ++ HF + G++ +A+ LD+E SY + A
Sbjct: 3342 ILTVSASDDDGPVNSAITYSLVGG-NQLGHFTINPKKGKLQVAKALDWEQTPSYSLRLRA 3400
Query: 61 TDRGK 65
TD G+
Sbjct: 3401 TDSGQ 3405
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L E T F + ++G + + ++LDFE R+ Y A+D
Sbjct: 947 LDASDPDLGPAGEVKYILVEDAHGT--FQVHPMTGALSLEKELDFERRAGYNLSFWASDS 1004
Query: 64 GK 65
GK
Sbjct: 1005 GK 1006
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GEI Q+LD+E+ + V
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEIFTIQELDYETHQHFRVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y +R+ F + SG + +A L+ R YE V+A D
Sbjct: 169 KVTATDADLGQNAEFYYAFN---ARSEVFAIHPTSGVVTVAGKLNVTRRGKYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E + +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDKDLGANGSVTYGFAEDYA---YFRIDPYVGDISLKKPFDYQALNKYHLRVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDSG 2149
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S F + + SG I + + L + S+ E V A+D
Sbjct: 3137 VFARDPDQGANAQVVYSLTDSAD--GQFSIDATSGVIRLEKPLQVRASSAVELTVRASDL 3194
Query: 64 G 64
G
Sbjct: 3195 G 3195
>gi|395736288|ref|XP_003776728.1| PREDICTED: protocadherin gamma-A8 [Pongo abelii]
Length = 820
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
>gi|348581858|ref|XP_003476694.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Cavia porcellus]
Length = 3302
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 554 VLRVTATDQDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYVLRIRA 612
Query: 61 TDRGK 65
D G+
Sbjct: 613 QDAGR 617
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1078 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1135
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 870 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 926
Query: 64 G 64
G
Sbjct: 927 G 927
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 970 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1029
Query: 61 TDRG 64
DRG
Sbjct: 1030 VDRG 1033
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 660 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGSLDRESVEHYFFGVE 717
Query: 60 ATDRG 64
A D G
Sbjct: 718 ARDYG 722
>gi|347543897|gb|AEP02521.1| PCDH15, partial [Chaerephon plicatus]
Length = 1918
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V Y+LG NH + + +G I LD E R YE VVATD
Sbjct: 731 QVRATDPDAGINGQVYYSLG----NFNHLFHITSNGSIYTTVKLDREVRDYYELLVVATD 786
>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
leucogenys]
Length = 4981
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDSTSGQVALTGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGIITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
ATDRG
Sbjct: 2231 ATDRG 2235
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKEHFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSHYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|262263287|tpg|DAA06587.1| TPA_inf: protocadherin beta 10 [Anolis carolinensis]
Length = 805
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G NA V YT P + N F + ++GEI + ++ +E +SY+ + AT
Sbjct: 259 KVEARDLDFGTNAQVTYTFHRVPEKIRNLFQLNEITGEITVLGEIHYEKETSYDMSIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|402872828|ref|XP_003900301.1| PREDICTED: protocadherin gamma-A8 [Papio anubis]
Length = 820
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
>gi|148703182|gb|EDL35129.1| mCG142340, isoform CRA_b [Mus musculus]
Length = 1859
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVNA ++YT+ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1326 VTATDSDSGVNADLHYTITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1382
Query: 62 DRGK 65
D+G+
Sbjct: 1383 DQGR 1386
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGT---PFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
TDRG
Sbjct: 326 TDRG 329
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ S+Y + A
Sbjct: 1218 VLRVSASDVDEGSNGLIHYSILKG-NEERQFAIDSFSGQVTLVGKLDYEATSAYSLLIQA 1276
Query: 61 TDRG 64
D G
Sbjct: 1277 VDSG 1280
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ VVATD
Sbjct: 711 VSATDPDMGPNGTVKYSI--SAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1428 VISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTNAEIDREFANLFELTVKA 1487
Query: 61 TDRG 64
D+
Sbjct: 1488 NDQA 1491
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + A LD E ++ Y ++A
Sbjct: 602 LLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN V Y+L ++P N F + +G I + LD + SY+ +VA
Sbjct: 912 IFQAKAVDPDEGVNGRVLYSLKQNPK--NLFTINEQNGNISLLGALDVHA-GSYQVEIVA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V Y L + F + SG++ + LD E RS Y V A
Sbjct: 1748 IMQLTAMDADEGANALVTYALISGAD--DSFRIDPESGDLIATKRLDREHRSKYSLLVRA 1805
Query: 61 TD 62
D
Sbjct: 1806 DD 1807
>gi|351707561|gb|EHB10480.1| Protocadherin alpha-8 [Heterocephalus glaber]
Length = 811
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D G NA ++Y+ P + F + + +GEI DLDFE S Y+ +
Sbjct: 261 VVRLNASDRDAGTNAAISYSFNSLVPPLVIDRFSIDASTGEIVTRGDLDFEQVSLYKIRI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|11128037|ref|NP_061745.1| protocadherin gamma-B1 isoform 1 precursor [Homo sapiens]
gi|37999833|sp|Q9Y5G3.1|PCDGD_HUMAN RecName: Full=Protocadherin gamma-B1; Short=PCDH-gamma-B1; Flags:
Precursor
gi|5456957|gb|AAD43724.1| protocadherin gamma B1 [Homo sapiens]
gi|119582356|gb|EAW61952.1| hCG1982215, isoform CRA_ae [Homo sapiens]
Length = 927
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
>gi|334330616|ref|XP_001369584.2| PREDICTED: protocadherin Fat 3 [Monodelphis domestica]
Length = 4557
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+DPD G+N V Y+L +S +F + S SG I + Q LD E +SSY V A
Sbjct: 3150 LTRVQATDPDLGINRKVVYSLADSAG--GYFSVDSSSGIIILEQPLDRELQSSYNISVKA 3207
Query: 61 TDR 63
+D+
Sbjct: 3208 SDQ 3210
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + ++ + T++F++ S SG I A+ LD ES V
Sbjct: 2306 VLQVVASDADSENNKIVQYQIVQDTYNSTDYFHIDSTSGLILTARMLDHESVQQSTLKVR 2365
Query: 60 ATDRG 64
ATD G
Sbjct: 2366 ATDNG 2370
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ SY V A
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVIYTADILDRETTGSYWLTVYA 1120
Query: 61 TDRG 64
TDRG
Sbjct: 1121 TDRG 1124
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+G+
Sbjct: 962 DPDLGLGGQVRYSLVND--YNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGR 1017
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+++V A D D G N V Y L + F + + +G I +DLD E ++ F
Sbjct: 2833 LIQVKAIDKDWGANGQVTYALHSDSNAEKVMEVFSIDTNTGWISTLKDLDHERDPTFTFS 2892
Query: 58 VVATDRGK 65
V+A+D G+
Sbjct: 2893 VLASDLGE 2900
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNY---TLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y +L P N F +G I ++LDFES +Y F
Sbjct: 491 VLSVSASDKDKGENGYITYSIASLNALPFSINQF-----TGVIRTTEELDFESSPENYRF 545
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 546 IVRASDWG 553
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA D D G N + Y+L S N F++ SGE+ LD E Y A
Sbjct: 3048 ILKISAKDADIGPNGDIRYSL--YGSGNNKFFLDPESGELKTLALLDREKIPVYNLIARA 3105
Query: 61 TDRG 64
TD G
Sbjct: 3106 TDGG 3109
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA + YT+ E+ + N F ++ + G I ++++ D + + +
Sbjct: 1585 VLQVTALDKDRGENAELLYTI-EAGNTGNTFKIEPILGIITVSKEPDMTTMGQFVLSIKV 1643
Query: 61 TDRG 64
TD+G
Sbjct: 1644 TDQG 1647
>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
Length = 4929
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2016 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2073
Query: 61 TDRGK 65
TD+G+
Sbjct: 2074 TDKGQ 2078
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2120 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2177
Query: 60 ATDRG 64
ATDRG
Sbjct: 2178 ATDRG 2182
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2636 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSHYVLTIKS 2694
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2695 SDKGSPSQ 2702
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3162 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3219
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2226 ILQVVARDDDRGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKERFVLMITA 2283
Query: 61 TDRG 64
TD G
Sbjct: 2284 TDSG 2287
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA+++Y + S+ F + +G+I + LD E++ +Y VV
Sbjct: 2330 VLLVNASDADASKNAVISYRIIGGNSQ---FTINPSTGQIITSALLDRETKDNYTLVVVC 2386
Query: 61 TDRG 64
+D G
Sbjct: 2387 SDAG 2390
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2742 RVTTSDEDIGINAISRYSIMDA---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2798
Query: 63 RG 64
G
Sbjct: 2799 SG 2800
>gi|395520509|ref|XP_003764371.1| PREDICTED: protocadherin Fat 3 isoform 2 [Sarcophilus harrisii]
Length = 4589
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+DPD G+N V Y+L +S +F + S SG I + Q LD E +SSY V A
Sbjct: 3150 LTRVQATDPDLGINRKVVYSLADSAG--GYFSVDSSSGIIILEQPLDRELQSSYNISVKA 3207
Query: 61 TDR 63
+D+
Sbjct: 3208 SDQ 3210
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFP 57
+++V A D D G N V Y L SP + F + S +G I +DLD E ++ F
Sbjct: 2833 LIQVKAIDRDWGANGQVTYALHSDSSPEKIMEVFSIDSNTGWISTLKDLDHERDPTFAFS 2892
Query: 58 VVATDRGK 65
VVA+D G+
Sbjct: 2893 VVASDLGE 2900
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V YTL F + SG I ++++LD+E + Y V A D+G+
Sbjct: 962 DPDLGLGGQVRYTLVND--YNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGR 1017
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + ++ + T++F++ S SG I A+ LD ES V
Sbjct: 2306 VLQVVASDADSENNKVVQYQIVQDTYNSTDYFHIDSTSGLILTARMLDHESVQQSTLKVR 2365
Query: 60 ATDRG 64
ATD G
Sbjct: 2366 ATDNG 2370
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y++ + F + S +G + +A LD ES+++Y + A
Sbjct: 850 IIQVEARDKDLGSNGEVTYSV---LTDAQQFSINSSTGIVYVADQLDRESKANYSLKIEA 906
Query: 61 TDRGKETQ 68
DR + Q
Sbjct: 907 RDRSESGQ 914
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ SY V A
Sbjct: 1062 VLQVTARDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVIYTADILDRETTGSYWLTVYA 1120
Query: 61 TDRG 64
TDRG
Sbjct: 1121 TDRG 1124
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA D D G N + Y+L S N F++ SGE+ LD E Y A
Sbjct: 3048 ILKISAKDADIGPNGDIRYSL--YGSGNNKFFLDPESGELKTLALLDREKIPVYNLVARA 3105
Query: 61 TDRG 64
TD G
Sbjct: 3106 TDGG 3109
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEFPVV 59
+L VSASD D G N + Y++ + F + +G I ++LDFES +Y F V
Sbjct: 491 VLSVSASDKDKGENGYITYSIASLSALP--FSINQFTGVIRTTEELDFESSPENYRFIVR 548
Query: 60 ATDRG 64
A+D G
Sbjct: 549 ASDWG 553
>gi|440902401|gb|ELR53198.1| Protocadherin alpha-C1, partial [Bos grunniens mutus]
Length = 1024
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+DPD G NA + Y+ SP+ FY+ SGEI LDFE YE V
Sbjct: 249 VIKLNATDPDDGTNADITYSFRRPVSPAILYAFYINPDSGEIRTKGKLDFEENKLYEISV 308
Query: 59 VATDRGK 65
A D+G
Sbjct: 309 EAIDKGN 315
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDL 46
+ RV ASDPD G N + Y+L S +HF++ +GE+ +A L
Sbjct: 576 LFRVQASDPDEGSNGEIRYSLSNSTQAKLRHHFHVHPRNGEVRVAASL 623
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 3 RVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
V A DPD G N +V Y L E S ++ + S SG I DFE + F V
Sbjct: 790 HVFAQDPDLGKNGLVFYELLDIISEGQSASSLVEVDSSSGAITAKISFDFEWLRGFHFQV 849
Query: 59 VATDRG 64
A D G
Sbjct: 850 EARDGG 855
>gi|297295324|ref|XP_002804588.1| PREDICTED: protein dachsous-like [Macaca mulatta]
Length = 2233
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 1550 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESSFYEIHA 1609
Query: 59 VATDRGK 65
A D+G+
Sbjct: 1610 RARDQGQ 1616
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 1118 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 1177
Query: 59 VATDRG 64
A D G
Sbjct: 1178 RARDGG 1183
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 1334 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 1393
Query: 60 ATDRGK 65
A DRG
Sbjct: 1394 ARDRGN 1399
>gi|54013424|dbj|BAD60801.1| protocadherin2-gamma-c6-sCP2 [Danio rerio]
Length = 829
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L++ A+DPD G+N + Y +P S N F + +GEI + LD+E++ SY F V
Sbjct: 258 VLKIKATDPDEGLNGEIEYLFAAHTPESVRNVFRVNVETGEIKVIGGLDYETKKSYTFDV 317
Query: 59 VATDRG 64
A D+G
Sbjct: 318 CAKDKG 323
>gi|40788213|dbj|BAA20785.2| KIAA0327 protein [Homo sapiens]
Length = 898
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 339 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 398
Query: 60 ATDRG 64
A D G
Sbjct: 399 AEDVG 403
>gi|380795977|gb|AFE69864.1| protocadherin gamma-C5 isoform 1 precursor, partial [Macaca
mulatta]
Length = 943
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 260 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESSFYEIHA 319
Query: 59 VATDRGK 65
A D+G+
Sbjct: 320 RARDQGQ 326
>gi|355691692|gb|EHH26877.1| hypothetical protein EGK_16956 [Macaca mulatta]
Length = 944
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
>gi|443694652|gb|ELT95736.1| hypothetical protein CAPTEDRAFT_182594 [Capitella teleta]
Length = 2682
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT S HF + G I A+ LD E +SYE A
Sbjct: 683 ILKISATDADSGLNGRVRYTFEGGFSGDGHFSIDPTLGVIRTAESLDREKVASYELRAFA 742
Query: 61 TDRG 64
DRG
Sbjct: 743 VDRG 746
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D G N +V Y++ + + FY+ +SGE+ + + LD+E +SY V A
Sbjct: 266 ILEVKATDADAGDNGLVRYSI-TGGNIQDTFYINDISGELSLRKPLDYERMNSYRLNVRA 324
Query: 61 TDRG 64
D G
Sbjct: 325 QDSG 328
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +V+A+D D G NA ++YT+ ES F + +GEI I + LD E SY V A
Sbjct: 581 IFQVTATDLDSGDNARISYTMDES----EMFAIDVETGEIFIKEGLDRELTPSYTLSVTA 636
Query: 61 TDRGKETQ 68
TD G+ ++
Sbjct: 637 TDHGRPSK 644
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 4 VSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++ASDPD G + Y+L N F + SG++ Q LD ES +++ ++A+
Sbjct: 51 ITASDPDEGDAGRLTYSLLATRDGRSQNMFTIDPSSGQLTTTQSLDRESIATHHLQIIAS 110
Query: 62 DRGKETQ 68
D G +Q
Sbjct: 111 DYGHPSQ 117
>gi|127139454|ref|NP_001076038.1| protocadherin gamma-B1 precursor [Pan troglodytes]
gi|62510863|sp|Q5DRB0.1|PCDGD_PANTR RecName: Full=Protocadherin gamma-B1; Short=PCDH-gamma-B1; Flags:
Precursor
Length = 927
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
>gi|195035917|ref|XP_001989418.1| GH11711 [Drosophila grimshawi]
gi|193905418|gb|EDW04285.1| GH11711 [Drosophila grimshawi]
Length = 5208
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 MLRVSASDP-DCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++RV A+D D GVNA ++Y L ES +R+ +F + G I + + +D + S +EF V
Sbjct: 3181 VVRVHANDDLDVGVNAEIDYILMES-NRSAYFTINKHDGWISLIRPIDVPANSRFEFNVK 3239
Query: 60 ATDRGKETQ 68
ATDRG +Q
Sbjct: 3240 ATDRGVPSQ 3248
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R ASD D GVN+ V +++ + +R + F++ SVSG + + + LD+E ++Y + A
Sbjct: 1423 LMRFRASDADQGVNSQVVFSI-TAGNRRDTFHIDSVSGSLYLHKSLDYEDITNYTLNITA 1481
Query: 61 TDRG 64
+D G
Sbjct: 1482 SDCG 1485
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+SA+D D G N V ++L S R F + S++G++ Q LD E+ ++YE V+A
Sbjct: 640 LSATDNDQGTNGSVTFSLAASVERQYPQQFAIDSITGQLMTRQPLDRETMANYEIFVIAR 699
Query: 62 DRG 64
D+G
Sbjct: 700 DQG 702
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN---HFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ V A DPD G+N V Y + HF + +++G I +++D ES ++
Sbjct: 1528 IVTVIADDPDSGLNGKVTYVISRQEPELQGGRHFGINTLTGVIYTLREIDRESIDNFRLT 1587
Query: 58 VVATDRGKETQ 68
VVATD+ + +
Sbjct: 1588 VVATDQAQPAE 1598
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V++SD D G NA YT ++P + F + SG I +A +D E + Y VVA
Sbjct: 2969 VISVTSSDLDLGENANATYTFSDNPGK--KFKIDPRSGNITVAGQIDREQQDEYILKVVA 3026
Query: 61 TD 62
+D
Sbjct: 3027 SD 3028
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N M++Y + R + F + +G I I Q LD++ Y +
Sbjct: 3287 ILTVSATDKDNGPNGMLHYAISGGNERRD-FNVNERTGAITIMQPLDYDLMQEYHLNITV 3345
Query: 61 TDRG 64
D G
Sbjct: 3346 EDLG 3349
>gi|397517968|ref|XP_003829175.1| PREDICTED: protocadherin gamma-B1 [Pan paniscus]
Length = 810
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
>gi|426350352|ref|XP_004042741.1| PREDICTED: protocadherin gamma-B1 [Gorilla gorilla gorilla]
Length = 810
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
>gi|426231065|ref|XP_004023512.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B7-like [Ovis
aries]
Length = 782
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRVSA+D D G NA + Y+ LG + + + F + S +G I Q LDFE+ Y V
Sbjct: 260 VLRVSATDQDEGFNAEITYSFLGVADTARHVFSLDSATGNIITHQPLDFENVGRYAMVVE 319
Query: 60 ATDRG 64
A DRG
Sbjct: 320 AKDRG 324
>gi|2250692|dbj|BAA21133.1| cadherin FIB1 [Homo sapiens]
Length = 137
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV+A DPD G N V Y+L + T+ F + SG I A LD+E + VVA
Sbjct: 59 VVRVTARDPDQGTNGQVTYSLAPG-AHTHWFSIDPTSGIITTAASLDYELEPQPQLIVVA 117
Query: 61 TDRG 64
TD G
Sbjct: 118 TDGG 121
>gi|14270490|ref|NP_115266.1| protocadherin gamma-B1 isoform 2 precursor [Homo sapiens]
gi|5457082|gb|AAD43777.1|AF152517_1 protocadherin gamma B1 short form protein [Homo sapiens]
gi|74353521|gb|AAI03927.1| Protocadherin gamma subfamily B, 1 [Homo sapiens]
gi|74355149|gb|AAI03928.1| Protocadherin gamma subfamily B, 1 [Homo sapiens]
gi|119582359|gb|EAW61955.1| hCG1982215, isoform CRA_ah [Homo sapiens]
Length = 810
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
>gi|47228024|emb|CAF97653.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1074
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L ++A DPD G+N V Y G + P+ F + SG + + +DFES+++YEF V
Sbjct: 260 LLDLNAEDPDEGLNGEVVYGFGHQVPTEIRQLFRVDRKSGRLTLESQIDFESKNTYEFDV 319
Query: 59 VATDRG 64
ATD G
Sbjct: 320 QATDLG 325
>gi|432099002|gb|ELK28484.1| Protocadherin Fat 1 [Myotis davidii]
Length = 3387
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V ASD D G N V Y+L +S S F + +G I ++LD E R SY+ V
Sbjct: 1828 VIQVRASDLDSGANGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDSYQIKV 1887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 1888 VASDHGEKVQ 1897
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L S F + +SG I + + LD E ++ Y V A
Sbjct: 2144 LTRVQATDADAGLNRKIAYSLINSAD--GQFSINELSGIIQLEKPLDRELQAVYTLTVKA 2201
Query: 61 TDRG 64
D+G
Sbjct: 2202 VDQG 2205
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++RV A+D D N ++Y + + S++ +HF++ S +G I + + LD+E + V
Sbjct: 1302 VVRVRATDADSEPNRGISYHMSGNHSKSHDHFHIDSSTGVISLVRALDYEQVRQHRIAVR 1361
Query: 60 ATDRG 64
A D G
Sbjct: 1362 AVDGG 1366
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS +F + S +G I LD+E S++ F V
Sbjct: 792 LVIRATDADKESNALLVYHIVE-PSIHKYFAIDSSTGAIHTVLSLDYEETSTFRFTVQVH 850
Query: 62 DRG 64
D G
Sbjct: 851 DMG 853
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D +N+ ++Y++ + ++ N F + GE+ + + LD E+ S Y V A
Sbjct: 2354 VLTVMADDADGPLNSHIHYSIIDG-NQGNPFTIDPTRGEVKVTKLLDRETISGYTLTVQA 2412
Query: 61 TDRG 64
+D G
Sbjct: 2413 SDNG 2416
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ + F + S +G I I ++LD+ES Y V A
Sbjct: 2249 ILQVYAASRDIEANADITYSIIGG-NEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEA 2307
Query: 61 TDRG 64
TD G
Sbjct: 2308 TDGG 2311
>gi|73949409|ref|XP_535217.2| PREDICTED: protocadherin gamma-C5 isoform 2 [Canis lupus
familiaris]
Length = 944
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEVVRNLFGLDPSSGAIHVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
SA DPD G N + YTL SPS +K++ E+ + Q LD E+++ ++ +
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPSSHLSLNVKTLKDGKLFPELVLEQQLDREAQARHQLVLT 213
Query: 60 ATDRG 64
A D G
Sbjct: 214 AVDGG 218
>gi|395856533|ref|XP_003800682.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Otolemur garnettii]
Length = 4378
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 672 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYVLRIRA 730
Query: 61 TDRGK 65
D G+
Sbjct: 731 QDAGR 735
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1196 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1253
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 988 ISASDDDVGENARITYFLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 1044
Query: 64 G 64
G
Sbjct: 1045 G 1045
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 1088 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1147
Query: 61 TDRG 64
DRG
Sbjct: 1148 VDRG 1151
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 778 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 835
Query: 60 ATDRG 64
A D G
Sbjct: 836 ARDHG 840
>gi|148703181|gb|EDL35128.1| mCG142340, isoform CRA_a [Mus musculus]
Length = 650
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVNA ++YT+ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 9 VTATDSDSGVNADLHYTITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 65
Query: 62 DRGK 65
D+G+
Sbjct: 66 DQGR 69
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I ++D E + +E V A
Sbjct: 111 VISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTNAEIDREFANLFELTVKA 170
Query: 61 TDRG 64
D+
Sbjct: 171 NDQA 174
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V Y L + F + SG++ + LD E RS Y V A
Sbjct: 431 IMQLTAMDADEGANALVTYALISGAD--DSFRIDPESGDLIATKRLDREHRSKYSLLVRA 488
Query: 61 TD 62
D
Sbjct: 489 DD 490
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN ++Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 535 ILATDDDSGVNGEISYVV-EEDDGDGIFFLNLVTGVFNLTRALDYETQQYYILTVRAEDG 593
Query: 64 GKET 67
G ++
Sbjct: 594 GGQS 597
>gi|149052656|gb|EDM04473.1| rCG33481 [Rattus norvegicus]
Length = 3111
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S SG I Q+LD E++ +Y F V
Sbjct: 1578 VIQVTANDQDTGSDGQVSYRLSVEPGSNIHELFAVDSESGWITTLQELDCETQQTYSFYV 1637
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 1638 VAFDHGQTIQ 1647
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSASD D VN+ + Y+L ++ HF + G++ +A+ LD+E SY + A
Sbjct: 2102 ILTVSASDDDGPVNSAITYSLVGG-NQLGHFTINPKKGKLQVAKALDWEQTPSYSLRLRA 2160
Query: 61 TDRGK 65
TD G+
Sbjct: 2161 TDSGQ 2165
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GEI Q+LD+E+ + V
Sbjct: 1051 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEIFTIQELDYETHQHFRVKVR 1110
Query: 60 ATDRG 64
A D+G
Sbjct: 1111 AMDKG 1115
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E + +F + G+I + + D+++ + Y V+A
Sbjct: 849 LFQVSATDKDLGANGSVTYGFAEDYA---YFRIDPYVGDISLKKPFDYQALNKYHLRVIA 905
Query: 61 TDRG 64
D G
Sbjct: 906 RDSG 909
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S F + + SG I + + L + S+ E V A+D
Sbjct: 1897 VFARDPDQGANAQVVYSLTDSAD--GQFSIDATSGVIRLEKPLQVRASSAVELTVRASDL 1954
Query: 64 G 64
G
Sbjct: 1955 G 1955
>gi|74355151|gb|AAI03929.1| Protocadherin gamma subfamily B, 1 [Homo sapiens]
Length = 810
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
>gi|38195903|gb|AAR13653.1| fat-like cadherin FATJ protein [Homo sapiens]
Length = 3222
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 367 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 424
Query: 61 TDRGK 65
TD+G+
Sbjct: 425 TDKGQ 429
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 471 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 528
Query: 60 ATDRG 64
ATDRG
Sbjct: 529 ATDRG 533
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 985 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSHYVLTIKS 1043
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 1044 SDKGSPSQ 1051
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 1511 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 1568
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 577 ILQVVARDDDRGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKERFVLMITA 634
Query: 61 TDRG 64
TD G
Sbjct: 635 TDSG 638
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 57 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 114
Query: 61 TD 62
D
Sbjct: 115 DD 116
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 1091 RVTTSDEDIGINAISRYSIMDA---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 1147
Query: 63 RG 64
G
Sbjct: 1148 SG 1149
>gi|402872830|ref|XP_003900302.1| PREDICTED: protocadherin gamma-C5 [Papio anubis]
Length = 879
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
>gi|302564429|ref|NP_001181814.1| protocadherin beta-13 precursor [Macaca mulatta]
Length = 753
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ + F + S++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
>gi|301753491|ref|XP_002912591.1| PREDICTED: protocadherin gamma-C5-like isoform 2 [Ailuropoda
melanoleuca]
gi|281345410|gb|EFB20994.1| hypothetical protein PANDA_000351 [Ailuropoda melanoleuca]
Length = 944
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEVVRNLFGLDPSSGAIHVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
>gi|302564845|ref|NP_001180833.1| protocadherin beta-8 precursor [Macaca mulatta]
Length = 801
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ + F + S++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D NA V Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 474 VSATDRDSSTNAQVTYSL--LPPQDQHLPLSSLVSINADNGHLFALRSLDYEALQEFEFR 531
Query: 58 VVATDRG 64
V A DRG
Sbjct: 532 VRAADRG 538
>gi|355691685|gb|EHH26870.1| hypothetical protein EGK_16946 [Macaca mulatta]
Length = 801
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ + F + S++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D NA V Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 474 VSATDRDSSTNAQVTYSL--LPPQDQHLPLSSLVSTNADNGHLFALRSLDYEALQEFEFR 531
Query: 58 VVATDRG 64
V A DRG
Sbjct: 532 VRAADRG 538
>gi|57529059|ref|NP_001009586.1| protocadherin 2 alpha a 15 [Danio rerio]
gi|54013410|dbj|BAD60794.1| protocadherin1-alpha-av15-vCP [Danio rerio]
Length = 939
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV+A+D D G N +V Y+LG + F + V+GEI + LDFE + YE +
Sbjct: 263 ILRVNATDLDEGQNGVVVYSLGHDVNDKLRKLFNVNPVTGEIVVTGLLDFEVKDIYEIDI 322
Query: 59 VATDRG 64
A+D+G
Sbjct: 323 QASDKG 328
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G N+ V+Y + N F + S +GEI + DFE+ +++F
Sbjct: 477 LFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFETSKTFQF 536
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 537 HILATDSG 544
>gi|390459327|ref|XP_003732276.1| PREDICTED: protocadherin beta-8-like [Callithrix jacchus]
Length = 801
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D G+N ++Y+L ++ + F + S++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGINGEISYSLFQASDEISKTFKVDSLTGEIRLKKQLDFEKLHSYEINIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 474 VSATDRDSGTNAQVTYSL--LPPQDTHLPLASLVSINADNGHLFALRSLDYEALQAFEFR 531
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 532 VGATDRG 538
>gi|54013426|dbj|BAD60802.1| protocadherin2-gamma-c6-sCP1-2 [Danio rerio]
Length = 874
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L++ A+DPD G+N + Y +P S N F + +GEI + LD+E++ SY F V
Sbjct: 258 VLKIKATDPDEGLNGEIEYLFAAHTPESVRNVFRVNVETGEIKVIGGLDYETKKSYTFDV 317
Query: 59 VATDRG 64
A D+G
Sbjct: 318 CAKDKG 323
>gi|380028708|ref|XP_003698032.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Apis florea]
Length = 4483
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N M+ Y + + N F++ S++G + I + LD++ Y+ + A
Sbjct: 2608 ILTVSATDGDDGPNGMIRYKISAG-NEKNEFFVHSITGAVTILEPLDYDLVQEYKLNITA 2666
Query: 61 TDRGKETQ 68
TD G E +
Sbjct: 2667 TDLGFEAK 2674
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+++SD D G NA V+Y E+P + F M ++SG + + LD E + Y +VA
Sbjct: 2289 VIRITSSDLDIGQNANVSYRFTENPGQ--KFAMDALSGNVTVNGHLDREEQDEYLLKLVA 2346
Query: 61 TD 62
D
Sbjct: 2347 AD 2348
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV +D D G+N V Y+L E ++ F + +G+I + ++LD E+ +Y VVA
Sbjct: 1240 LLRVYTTDADEGLNGDVFYSL-EDGNQYGRFAIDEATGQISLMKELDRETMDTYVLTVVA 1298
Query: 61 TD 62
D
Sbjct: 1299 HD 1300
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+VSA D D G N V+Y L + T F + S +GEI LD E +SYE V A D
Sbjct: 2188 KVSAKDRDSGENGQVSYYLVNDFTET--FIIDSDNGEISTNAKLDREEIASYELIVEARD 2245
Query: 63 RGK 65
G+
Sbjct: 2246 EGQ 2248
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G N V Y+L ++ T F + V G + ++ LD E RS+Y V A
Sbjct: 1554 VMAIKAVDRDEGRNGYVEYSLEDT---TLPFTVGPVDGLLRVSGSLDRELRSNYTLEVTA 1610
Query: 61 TDRGK 65
DRG+
Sbjct: 1611 KDRGE 1615
>gi|324499643|gb|ADY39852.1| Protein dachsous [Ascaris suum]
Length = 2824
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSAS+ +CG NA ++Y++ + P F + G IC+ + LD+E + Y+ V+A
Sbjct: 560 LLKVSASN-NCGANAKIHYSIRDQPIIRKLFNIDDQWGTICVEEALDYEKTTKYQLTVLA 618
Query: 61 TD 62
D
Sbjct: 619 HD 620
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+ A+DPD G NA V Y++ ++ P + F + S +G + A+ E S++E ++A+D
Sbjct: 252 LQATDPDLGANANVTYSIAKNRPDVISLFKIDSQTGVVRTAES-PLEPGSTHELLIIASD 310
Query: 63 RG 64
+G
Sbjct: 311 QG 312
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 29 NHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
N+ ++ +SGEI + DLD+E R+SY+ + D
Sbjct: 65 NYITVEEISGEISVKSDLDYERRTSYDLLAIPVD 98
>gi|156386258|ref|XP_001633830.1| predicted protein [Nematostella vectensis]
gi|156220905|gb|EDO41767.1| predicted protein [Nematostella vectensis]
Length = 4187
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G + ++L ES T F + S SG I + Q LDFE +S+Y V TD+
Sbjct: 918 IHASDPDSGPGGEIEFSLPES---TRKFNIDSKSGVIRLRQRLDFEQKSTYNLTVRVTDK 974
Query: 64 G 64
G
Sbjct: 975 G 975
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V A D D G+N +NY + ++ SR F+ + SG + +A+ LD+ESR +E +V
Sbjct: 2255 VVTVKAIDGDSGINKEINYFI-QNVSRVGAFFKIDKKSGVVFVAKSLDYESRVVHEMIIV 2313
Query: 60 ATDRGK 65
A D GK
Sbjct: 2314 AADEGK 2319
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G N + Y + + F + S +G+I DLD+ESR ++ V A
Sbjct: 338 VLRVLATDKDAGSNGNIMYVITRG-NELGKFEINSKTGQIYTKGDLDYESRQRFDLTVAA 396
Query: 61 TD 62
D
Sbjct: 397 LD 398
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D G NA + Y++ E + F + +G I ++ D+D E +SY V A
Sbjct: 3291 VLQVFATDRDSGTNAQIKYSIAEG-NDAKKFKIVEETGVIKVSGDIDREEVASYRLKVRA 3349
Query: 61 TDRGKETQ 68
D+G Q
Sbjct: 3350 QDQGLPPQ 3357
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A D D G N MV Y L + F + +G I LD E + S+EF V
Sbjct: 2775 VLRVFAEDLDSGSNGMVTYALVSKDKLVKEKFDIDQHTGWITTRGALDREKQPSFEFQVR 2834
Query: 60 ATDRG 64
ATD G
Sbjct: 2835 ATDNG 2839
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPS--RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
L + DPD GVN V Y + ++ + F ++S SG I + LD+E+ + +
Sbjct: 1433 LVTTVKDPDAGVNGEVEYCIVQTAKAESASLFKIESHSGRILTVKPLDYETMQEHVLTIK 1492
Query: 60 ATDRG 64
A+DRG
Sbjct: 1493 ASDRG 1497
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V+A DPD G +++ YT+ + + N+F + SG I + LD E +S Y+ V A
Sbjct: 1123 VVQVTAKDPDSG-GSLLRYTITKG-NEQNNFVIDPQSGLITTLRPLDREFKSEYKLTVSA 1180
Query: 61 TDRG 64
+D G
Sbjct: 1181 SDGG 1184
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R+ A D D G N ++ Y+ E +T F + +SG + +AQ L +R + VVA
Sbjct: 124 IARIEAVDADVGPNGLIYYSFKE---KTTSFAINPISGVVSVAQKLSNSAR-IHRLTVVA 179
Query: 61 TDRG 64
DR
Sbjct: 180 RDRA 183
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
A+D D G N +V Y++ E + F + +GE+ +A LD E+ SSY + A D GK
Sbjct: 710 ATDEDKGYNGLVLYSIVEG-DVDSVFNINMFTGELTVAMPLDRETISSYTLNISAVDCGK 768
Query: 66 E 66
Sbjct: 769 H 769
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +V A+D D G NA + Y++ + +R N F + S SGEI ++ SY+ +VA
Sbjct: 1229 LYQVVATDEDIGSNADLRYSITKG-NRDNKFIIDSRSGEIF--TNVSLVDGESYDLTIVA 1285
Query: 61 TDRG 64
D G
Sbjct: 1286 EDNG 1289
>gi|109079045|ref|XP_001091651.1| PREDICTED: protocadherin beta-13-like isoform 1 [Macaca mulatta]
Length = 798
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ + F + S++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDAHLSLTSLVSINADNGHLFALRSLDYEALQGFEFR 530
Query: 58 VVATDRG 64
V A+DRG
Sbjct: 531 VGASDRG 537
>gi|440892175|gb|ELR45490.1| Protocadherin gamma-C5 [Bos grunniens mutus]
Length = 942
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
SA DPD G N + YTL SPS +K++ E+ + Q LD E+++ ++ +
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPSSHFSLNVKTLKDGKLFPELVLEQQLDRETQARHQLVLT 213
Query: 60 ATDRG 64
A D G
Sbjct: 214 AVDGG 218
>gi|50510647|dbj|BAD32309.1| mKIAA0811 protein [Mus musculus]
Length = 1654
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S SG I Q+LD E++ +Y F V
Sbjct: 121 VIQVTANDQDTGSDGQVSYRLSVEPGSNIHQLFAVDSESGWITTLQELDCETQQTYRFYV 180
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 181 VAFDHGQTIQ 190
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSASD D VN+++ Y+L ++ HF + G++ +A+ LD+E SY + A
Sbjct: 645 ILTVSASDDDGPVNSVITYSLVGG-NQLGHFTIDPKKGKLQVAKALDWEQTPSYSLRIRA 703
Query: 61 TDRGK 65
TD G+
Sbjct: 704 TDSGQ 708
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD GVNA V Y+L + S F + + SG I + + L S S+ E V A+D
Sbjct: 440 VFARDPDQGVNAQVVYSLTD--SADGQFSIDATSGVIRLEKPLQVRSSSAVELTVRASDL 497
Query: 64 G 64
G
Sbjct: 498 G 498
>gi|391338304|ref|XP_003743499.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Metaseiulus occidentalis]
Length = 4957
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+DPD G N M+ YT+ + T+ + SVSG+I +++ LD E+ + Y V+A
Sbjct: 1226 IARVSATDPDDGPNGMIVYTIPD----TDVVTIDSVSGQISLSKTLDRETVTEYSLTVIA 1281
Query: 61 TD 62
+D
Sbjct: 1282 SD 1283
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + SA D D G+N V+Y++ R + F + +++G + + + LDFE +SSY + A
Sbjct: 1331 IYQFSAEDMDLGLNGEVSYSISAGNIR-DAFRIDAITGVLRVNKALDFEQKSSYALNITA 1389
Query: 61 TDRG 64
D G
Sbjct: 1390 ADGG 1393
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 4 VSASDPDCGVNAMVNYTL-GESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V A+D D N+ ++Y+L G+ P + HF +K+ +G+I A+++D E +Y+ + AT
Sbjct: 1439 VVATDRDLKQNSKISYSLTGQVPHTEPFHFRIKAETGQIYTAREIDREFTDTYKLTITAT 1498
Query: 62 DRGK 65
D G+
Sbjct: 1499 DHGE 1502
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++++ D D G NA+ Y+L E+P F + VSG + +A LD E + Y V
Sbjct: 2803 VIQMTSIDSDIGQNAIATYSLNENPG--GKFAIDPVSGNVTVAGSLDRELKDEYNLKVTV 2860
Query: 61 TD 62
D
Sbjct: 2861 FD 2862
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V A D D G N+ + Y+ SR+ F + V G + + +LD E +S Y+ VV
Sbjct: 2074 IMAVKAVDGDEGRNSHIEYSFA---SRSESLFSIGPVDGLLRVNSELDRELKSEYQIIVV 2130
Query: 60 ATDRGK 65
A DRGK
Sbjct: 2131 AKDRGK 2136
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + ASDPD GVN + +++ +F + SG + + + LDFE+ Y V
Sbjct: 3120 LLTIQASDPDEGVNGQLAFSI----EANGNFAIDKHSGIVTLNESLDFETAQGYSLKVAV 3175
Query: 61 TD 62
D
Sbjct: 3176 RD 3177
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +++A+D D G+NA++ YTL E PS F + +G + + D E +S++ V
Sbjct: 2391 IAKITATDSDQGLNALLRYTLKE-PS--GWFELDPQTGVLIAKRSFDREKHASFDLEVNC 2447
Query: 61 TDRG 64
TD G
Sbjct: 2448 TDSG 2451
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V ASD D G N ++YT+ E + + S +G I + LD E+RS Y V A
Sbjct: 1968 VLSVHASDLDSGPNGEISYTILEGDD--DQQFRISENGRIITTRALDRETRSHYNLIVSA 2025
Query: 61 TDRG 64
DR
Sbjct: 2026 EDRA 2029
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ +++A+D D G N V+Y L S + F + +SG I A LD E + Y+ V
Sbjct: 585 VTQITATDNDLGPNGTVSYALQSSVKLQYGDMFEIDPLSGRITTAMALDRERCAFYQLTV 644
Query: 59 VATDRGK 65
+A D G+
Sbjct: 645 IAKDNGQ 651
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
A D D G+N+MV Y+L S + F ++ +G + + + +S YEF ++A+D+G+
Sbjct: 2500 AHDADIGLNSMVEYSL--SGPDVDFFVVEPTTGVVKQRKPWMADRQSPYEFRLIASDKGQ 2557
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV ASD D GVNA + +++ + F + +GEI + LD ++ YE V AT+
Sbjct: 695 RVYASDADEGVNARIVFSIVNGAE--DRFKINDATGEILNTRVLDTRQQARYEITVSATN 752
Query: 63 R 63
+
Sbjct: 753 K 753
>gi|354484251|ref|XP_003504303.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3
[Cricetulus griseus]
Length = 3288
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 530 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYVLRIRA 588
Query: 61 TDRGK 65
D G+
Sbjct: 589 QDAGR 593
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1054 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1111
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 846 ISASDDDVGENARITYLLEDN---LPQFRIDANSGAITLQAPLDYEDQVTYTLAITARDN 902
Query: 64 G 64
G
Sbjct: 903 G 903
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 946 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1005
Query: 61 TDRG 64
DRG
Sbjct: 1006 VDRG 1009
>gi|426229750|ref|XP_004023518.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C5-like [Ovis
aries]
Length = 841
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGTIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
SA DPD G N + YTL SPS +K++ E+ + Q LD E+++ ++ +
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPSSHFSLNVKTLKDGKLFPELVLEQQLDRETQARHQLVLT 213
Query: 60 ATDRG 64
A D G
Sbjct: 214 AVDGG 218
>gi|358413168|ref|XP_003582484.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C5 [Bos taurus]
gi|359067613|ref|XP_003586364.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C5 [Bos taurus]
Length = 840
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
SA DPD G N + YTL SPS +K++ E+ + Q LD E+++ ++ +
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPSSHFSLNVKTLKDGKLFPELVLEQQLDRETQARHQLVLT 213
Query: 60 ATDRG 64
A D G
Sbjct: 214 AVDGG 218
>gi|344236025|gb|EGV92128.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus griseus]
Length = 3109
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 485 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYVLRIRA 543
Query: 61 TDRGK 65
D G+
Sbjct: 544 QDAGR 548
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1009 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1066
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 801 ISASDDDVGENARITYLLEDN---LPQFRIDANSGAITLQAPLDYEDQVTYTLAITARDN 857
Query: 64 G 64
G
Sbjct: 858 G 858
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 901 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 960
Query: 61 TDRG 64
DRG
Sbjct: 961 VDRG 964
>gi|156523124|ref|NP_001095976.1| protocadherin alpha-13 precursor [Bos taurus]
gi|154757543|gb|AAI51665.1| PCDHA13 protein [Bos taurus]
Length = 950
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+DPD G NA + Y+ SP+ FY+ SGEI LDFE YE V
Sbjct: 261 VIKLNATDPDDGTNADITYSFRRPVSPAILYAFYINPDSGEIRTKGKLDFEENKLYEISV 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 EAIDKG 326
>gi|344265064|ref|XP_003404607.1| PREDICTED: protocadherin beta-13-like [Loxodonta africana]
Length = 798
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++RVSA+D D G NA ++Y+L E S+T F + +GEI + + LDFE+ SYE
Sbjct: 261 IVRVSATDIDIGANAQISYSLFQVSEEISKT--FQVNPTTGEIRLKKQLDFETIQSYEVN 318
Query: 58 VVATDRG 64
+ A D G
Sbjct: 319 MEARDAG 325
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSY 54
M VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++
Sbjct: 470 MGSVSATDRDSGSNAQVTYSL--LPPQDPHLPLASLVSINADNGHLFALRSLDYEALRAF 527
Query: 55 EFPVVATDRG 64
EF V ATD G
Sbjct: 528 EFRVGATDAG 537
>gi|326673315|ref|XP_003199835.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 795
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G N + Y+ G+S S F + ++SGEI + LD+E + SYE +
Sbjct: 263 VIQVNATDSDEGPNGEIVYSFGKSVSSKVRKLFDINTISGEIIVKGLLDYEGKDSYEIDI 322
Query: 59 VATDRG 64
A+D+G
Sbjct: 323 QASDKG 328
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G N+ V+Y + N F + S +GEI + DFE+ +++F
Sbjct: 477 LFSVSASDKDSGENSAVSYHIWRDGGAENKFTSFININSENGEIYALKSFDFETSKTFQF 536
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 537 HILATDSG 544
>gi|395839907|ref|XP_003792813.1| PREDICTED: protocadherin Fat 1 [Otolemur garnettii]
Length = 4588
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L S S F + +G I ++LD E R++Y+ V
Sbjct: 2828 VIQIRASDLDSGTNGQVTYSLDLSQSEEVIESFTINKETGWITTLKELDHEKRANYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKVQ 2897
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSSQVRYSLMDHGEG-----GFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGKET 67
V D+GK T
Sbjct: 1001 VRVKDKGKPT 1010
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LD+ YE V+A
Sbjct: 169 IARVSATDADIGTNGEFYYSFKD---RTDMFAVHPTSGVVVLTGKLDYIETQLYEMEVLA 225
Query: 61 TDRG 64
DRG
Sbjct: 226 VDRG 229
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+++A D D G NA V Y++ ES + N F + + G I A++LD ++ Y+ V A
Sbjct: 1581 VLQITALDKDKGENAEVLYSI-ESGNIGNSFTIDPILGSIKTAKELDRSNQVEYDLIVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y L S F + +SG I + + LD E ++ Y V A
Sbjct: 3144 LTRVQATDADAGLNQKISYLLMNSAD--GQFSINELSGIIQLEKPLDRELQAVYTLTVKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ I LD E ++ Y V A
Sbjct: 3042 VMQISATDADIRSNAEITYTLFGSGAE--KFKLNPDTGELKILTALDREHQAVYNLLVKA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y L S + F + S +G I I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITY-LIISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSS-YEFP 57
++ VSA DPD G N V Y++ + NH F + +G + I+++LD+E Y
Sbjct: 482 IMSVSAEDPDEGENGYVTYSI----ANLNHVPFVIDHFTGAVSISENLDYELMPRVYSLR 537
Query: 58 VVATDRG 64
+ A+D G
Sbjct: 538 IRASDWG 544
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A D D N+ + Y++ + ++ N F + SV GE+ + + LD E+ S Y V A
Sbjct: 3354 VITVMADDADGPSNSHIRYSIIDG-NQGNPFTIDSVKGEVKVTRLLDRETISGYTLTVQA 3412
Query: 61 TDRG 64
+D G
Sbjct: 3413 SDNG 3416
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V A+D D N ++Y + G +HF++ S +G I + + LDFE ++ V
Sbjct: 2302 VVHVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDFEQSQQHKIFVR 2361
Query: 60 ATDRG 64
A D G
Sbjct: 2362 AVDGG 2366
>gi|218505733|ref|NP_001136214.1| protocadherin-15 isoform CD2-1 precursor [Mus musculus]
Length = 1790
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 750 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 805
>gi|296485293|tpg|DAA27408.1| TPA: protocadherin alpha 13 [Bos taurus]
Length = 950
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+DPD G NA + Y+ SP+ FY+ SGEI LDFE YE V
Sbjct: 261 VIKLNATDPDDGTNADITYSFRRPVSPAILYAFYINPDSGEIRTKGKLDFEENKLYEISV 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 EAIDKG 326
>gi|291384089|ref|XP_002708683.1| PREDICTED: FAT tumor suppressor homolog 3 [Oryctolagus cuniculus]
Length = 4559
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S + F + SG I + Q LD E +SSY V A
Sbjct: 3150 LTRVQAVDPDVGINRKVVYSLADSAN--GFFSIDGTSGIIILEQPLDREQQSSYNISVRA 3207
Query: 61 TDR 63
TD+
Sbjct: 3208 TDQ 3210
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y++ + T F + S +G I +A LD ES+++Y + A
Sbjct: 850 IIQVEARDKDLGSNGEVTYSV---LTDTQQFAINSSTGIIYVADQLDRESKANYSLKIEA 906
Query: 61 TDRGKETQ 68
D+ + Q
Sbjct: 907 RDKAESGQ 914
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ SY V A
Sbjct: 1062 VLQVTAQDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVITAADILDRETTGSYWLTVYA 1120
Query: 61 TDRG 64
TDRG
Sbjct: 1121 TDRG 1124
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+ +V A D D G N V Y+L P + F + S +G I +DLD E+ + F
Sbjct: 2833 LTQVRAMDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDHETDPMFTFS 2892
Query: 58 VVATDRGK 65
VVA+D G+
Sbjct: 2893 VVASDLGE 2900
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+G+
Sbjct: 962 DPDLGLGGQVRYSLVND--YNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGR 1017
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N + Y+L S N F++ SGE+ LD E Y A
Sbjct: 3048 ILKVSAKDADIGSNGDIRYSL--YGSGNNEFFLDPESGELKTFAPLDRERVPVYNLIARA 3105
Query: 61 TDRG 64
TD G
Sbjct: 3106 TDGG 3109
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA + YT+ E+ + N F ++ V G I ++++ D + + V
Sbjct: 1585 VLQVTALDKDKGENAELIYTI-EAGNTGNTFKIEPVLGIISVSKEPDMTTMGQFVLSVKV 1643
Query: 61 TDRG 64
TD+G
Sbjct: 1644 TDQG 1647
>gi|195120792|ref|XP_002004905.1| GI19343 [Drosophila mojavensis]
gi|193909973|gb|EDW08840.1| GI19343 [Drosophila mojavensis]
Length = 3570
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSASDPD G+N + Y L + F + SG I + LD ES ++Y +A
Sbjct: 1023 VIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTNKGLDRESVATYHLTAIA 1082
Query: 61 TDRG 64
D+G
Sbjct: 1083 VDKG 1086
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSA+D D G+NA + Y+L E S + F + +G I + LD E+ S Y
Sbjct: 913 VLVVSATDSDVGINAQITYSLNEESINGLSSPDPFTINPQTGAIITSAPLDRETTSGYLL 972
Query: 57 PVVATDRG 64
V A D G
Sbjct: 973 TVTAKDGG 980
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 3 RVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ A+D D G NA + Y + G + S+ F + S+SG++ + + LD+ES SY + A
Sbjct: 602 HIRATDADQGNNAAIRYAIIGGNTQSQ---FSIDSMSGDVSLVKPLDYESVRSYRLVIRA 658
Query: 61 TDRGKETQ 68
D G ++
Sbjct: 659 QDGGSPSR 666
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMK--SVSGEICIAQDLDFESRSSYEFPV 58
++RV A D D G NA ++Y++ E R ++F + + +G + + LD E ++ + F V
Sbjct: 705 IIRVQAYDSDEGANAEISYSISE---RDDNFPLAVDARTGWVQTIKPLDREEQNRFAFQV 761
Query: 59 VATDRG 64
VA D G
Sbjct: 762 VAKDGG 767
>gi|345328979|ref|XP_001512413.2| PREDICTED: protocadherin Fat 4-like [Ornithorhynchus anatinus]
Length = 3217
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A+D D G NA ++Y++ E+ T+ F++ +SG+I Q LD+E+ + Y F V A
Sbjct: 2117 ILNVTATDKDIGYNAAIHYSIVET---TSLFFIGELSGKIGTLQPLDYETSAQYTFTVRA 2173
Query: 61 TDRG 64
+ G
Sbjct: 2174 FNPG 2177
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L SA D D G N +V+Y+L S+ + + SV+G I + +DLD E ++ Y + A
Sbjct: 1388 LLNASAIDADSGYNGLVSYSLKGGESKID---IDSVTGFITLRKDLDREMQALYNLTITA 1444
Query: 61 TDRGK 65
+D+G+
Sbjct: 1445 SDQGQ 1449
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L +A+D D G NA V Y + + S + F + + +G++ ++Q LDFE+ ++ V
Sbjct: 1491 LLATTATDLDVGANAEVKYAIASVDPSSASPMFSINTTTGQLSLSQPLDFETIKWFKIEV 1550
Query: 59 VATDRG 64
A+D G
Sbjct: 1551 KASDGG 1556
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA++++ L S + N F +K SG I + LD E + +Y+ +VA+D
Sbjct: 1706 KVAATDLDDGDNALISFHLC-SETEENVFSIKQ-SGNILVVNSLDREVQDTYKLLLVASD 1763
Query: 63 RG 64
RG
Sbjct: 1764 RG 1765
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
SA+D D G NA + Y L + T F + + +G + + LD E++ +Y ++ATD G
Sbjct: 2018 SATDRDIGDNARITYFLEDDFGGT--FQINNSTGRLITGKTLDRETKDNYTLKILATDMG 2075
Query: 65 K 65
K
Sbjct: 2076 K 2076
>gi|449689758|ref|XP_004212135.1| PREDICTED: protocadherin Fat 4-like, partial [Hydra magnipapillata]
Length = 1883
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ SA+D D GVN +V+Y + S + ++ FY+ S SGE+ ++ D+E +SY + A
Sbjct: 1421 KFSATDKDIGVNGLVSYLIDNSTNIYSDSFYLNSTSGELQLSGKFDYELYTSYMLKINAH 1480
Query: 62 DRGKETQ 68
D G Q
Sbjct: 1481 DSGSPQQ 1487
>gi|149043790|gb|EDL97241.1| rCG60633 [Rattus norvegicus]
Length = 1351
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 156 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 211
>gi|85725301|gb|ABC79268.1| protocadherin-15-CD2 isoform 1 [Mus musculus]
Length = 1790
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 750 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 805
>gi|22164112|gb|AAM93563.1| protocadherin C5 gamma C-I [Mus musculus]
gi|148678179|gb|EDL10126.1| mCG133388, isoform CRA_i [Mus musculus]
Length = 871
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S T N F + SG I + +DFE + YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSETVKNLFGLDPSSGAIHVLGPVDFEESNFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
SA DPD G N + YTL SP+ ++K++ E+ + Q LD E+++ ++ +
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPNSHFSLHVKTLKDGKLFPELVLEQQLDRETQARHQLVLT 213
Query: 60 ATDRG 64
A D G
Sbjct: 214 AVDGG 218
>gi|54013420|dbj|BAD60799.1| protocadherin2-gamma-c6-A [Danio rerio]
Length = 948
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L++ A+DPD G+N + Y +P S N F + +GEI + LD+E++ SY F V
Sbjct: 258 VLKIKATDPDEGLNGEIEYLFAAHTPESVRNVFRVNVETGEIKVIGGLDYETKKSYTFDV 317
Query: 59 VATDRG 64
A D+G
Sbjct: 318 CAKDKG 323
>gi|301753501|ref|XP_002912637.1| PREDICTED: protocadherin gamma-B4-like [Ailuropoda melanoleuca]
Length = 803
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D GVNA + ++ E+ + F + S++GEI I LDFE Y + A
Sbjct: 261 VLRVMATDQDEGVNAQITFSFSEA-GQITQFDLNSITGEITILNTLDFEEVKEYSIVLEA 319
Query: 61 TDRG 64
D G
Sbjct: 320 RDGG 323
>gi|18087749|ref|NP_291060.1| protocadherin gamma-C4 [Mus musculus]
gi|13876362|gb|AAK26101.1| protocadherin gamma C4 [Mus musculus]
gi|40673932|gb|AAH64808.1| Protocadherin gamma subfamily C, 4 [Mus musculus]
gi|148678188|gb|EDL10135.1| mCG133388, isoform CRA_r [Mus musculus]
Length = 941
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF V
Sbjct: 264 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDV 323
Query: 59 VATDRG 64
A D G
Sbjct: 324 RARDGG 329
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 480 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 539
Query: 60 ATDRG 64
A DRG
Sbjct: 540 ARDRG 544
>gi|410948363|ref|XP_003980910.1| PREDICTED: protocadherin gamma-C5 [Felis catus]
Length = 944
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEVVRNIFGLDPSSGAIHVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 11/67 (16%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMK-------SVSGEICIAQDLDFESRSSYEFP 57
SA DPD G N + YTL SPS +HF++ + E+ + Q LD E+++ ++
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPS--SHFFLNVKTLKDGKLFPELVLEQQLDREAQARHQLV 211
Query: 58 VVATDRG 64
+ A D G
Sbjct: 212 LTAVDGG 218
>gi|402872875|ref|XP_003919499.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8 [Papio anubis]
Length = 715
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ + F + S++GEI + + LDFE SYE +
Sbjct: 176 VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFEKLQSYEVNIE 235
Query: 60 ATDRG 64
A D G
Sbjct: 236 ARDAG 240
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D NA V Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 388 VSATDRDSSTNAQVTYSL--LPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQEFEFR 445
Query: 58 VVATDRG 64
V A DRG
Sbjct: 446 VRAADRG 452
>gi|348566837|ref|XP_003469208.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Cavia
porcellus]
Length = 4579
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G+N V Y+L +S S F + + +G I ++LD E R +Y+ V
Sbjct: 2829 VIQIRASDLDSGLNGHVMYSLDQSQSVDIIESFAINAETGWITTLKELDHEERDNYQIKV 2888
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2889 VASDHGEKVQ 2898
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 947 IMWLEAYDPDVGQSSQVRYSLLDHGEG-----NFDVDKLSGAVRIVQQLDFERKQVYNLT 1001
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1002 VRAKDKGK 1009
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N Y+ + RT+ F + SG + + LD+ YE ++A
Sbjct: 169 IAKVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGAVVLTGRLDYMETQLYELEILA 225
Query: 61 TDRG 64
DRG
Sbjct: 226 VDRG 229
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L +S + F + +SG I + + LD E ++ Y + A
Sbjct: 3145 LTRVQATDADTGLNRKISYSLIDSAN--GQFSINDISGIIQLEKPLDREQQAVYTLTLKA 3202
Query: 61 TDRG 64
D+G
Sbjct: 3203 VDQG 3206
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD + Y+ V A
Sbjct: 1582 VLQVTALDKDKGKNAEVVYSI-ESGNIGNSFTIDPILGSIKTAKELDRSHQEEYDLMVKA 1640
Query: 61 TDRG 64
D+G
Sbjct: 1641 ADKG 1644
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE---SPSRTNHFYMKSVSGEICIAQDLDFESRSS-YEF 56
+LRVSA DPD G N V Y++ P NHF +G + +++LD+E Y
Sbjct: 483 VLRVSAVDPDDGENGYVTYSIANVNPVPFVINHF-----TGAVSTSENLDYELMPRVYTL 537
Query: 57 PVVATDRG 64
+ A+D G
Sbjct: 538 RIRASDWG 545
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + S++G + + LD E + + + A
Sbjct: 842 IIQVEATDKDLGSNGHVTYSIL---TDTDKFSIDSITGVVKVVHPLDREVQHVHYLKIEA 898
Query: 61 TDRGKE 66
D+ KE
Sbjct: 899 RDQAKE 904
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D NA + YTL S + F + +GE+ LD E ++ Y V A
Sbjct: 3043 IMQVSATDADIRSNAEITYTLLGSGAE--KFRLNPDTGELKTLAPLDREEQAVYNLLVKA 3100
Query: 61 TDRG 64
TD G
Sbjct: 3101 TDGG 3104
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D N ++Y + G +HF++ S +G I + + LD+E ++ V
Sbjct: 2303 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHIDSTTGLISLLRTLDYEQFQQHKIFVR 2362
Query: 60 ATDRG 64
A D G
Sbjct: 2363 AIDGG 2367
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A+ D NA + Y++ S + F + + +G I I ++LD+ES Y V A
Sbjct: 3250 VLQLYAASRDIEANAEITYSI-ISGNEHGKFSIDAKTGAIFIIENLDYESAHEYYLTVEA 3308
Query: 61 TDRG 64
TD G
Sbjct: 3309 TDGG 3312
>gi|334311089|ref|XP_001377821.2| PREDICTED: protocadherin gamma-A4-like, partial [Monodelphis
domestica]
Length = 835
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G+N +NY + +T+ F + S++G+I + ++LD+E S Y+ +
Sbjct: 261 LLTVNATDPDEGINGKINYFFRKITKKTSRIFRLDSLTGDIIVLENLDYEESSFYDIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 ARD 323
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG---EICIAQDLDFESRSSYEFPVVATD 62
A DPD GVN++ NY L ++P + H + E+ + + LD E + ++A+D
Sbjct: 157 AFDPDVGVNSLKNYQLSQNPYFSLHVKRGTDEAKYPELVLERALDREEEPVHHLTLIASD 216
Query: 63 RG 64
G
Sbjct: 217 GG 218
>gi|194219783|ref|XP_001504040.2| PREDICTED: protocadherin gamma-C5-like [Equus caballus]
Length = 944
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFDLDPSSGAIHVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
>gi|444713167|gb|ELW54075.1| Protocadherin alpha-13 [Tupaia chinensis]
Length = 1863
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+DPD G N + Y+ + SP+ F + SGEI LDFE + YE PV
Sbjct: 1331 VIKLNATDPDEGTNGDIVYSFRKPVSPAVAYAFIINPNSGEIKTKGLLDFEEKKLYEIPV 1390
Query: 59 VATDRG 64
A D+G
Sbjct: 1391 EAVDKG 1396
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++++A+D D GVN V Y+L P+ + F + +GE+ + LD+E YE V
Sbjct: 261 VIKLNATDRDEGVNGEVTYSLMSIKPNGSPLFILDRNNGEMRVNGTLDYEENKFYEIEVQ 320
Query: 60 ATDRG 64
ATD+G
Sbjct: 321 ATDKG 325
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+N ++Y + S F + S +GEI + LDFE S YE V
Sbjct: 697 VIQLNASDVDQGLNGEISYGIRIILPVSEKCIFSINSDTGEIRVYGTLDFEENSMYEIQV 756
Query: 59 VATDRG 64
A D+G
Sbjct: 757 NAMDKG 762
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYM-------KSVSGEICIAQDLDFESRSSYEFPV 58
ASD D GVN+++ Y L S HF + K++S E+ + + LD E + +
Sbjct: 593 ASDADIGVNSLLTYVL----SLNEHFALKITTKKDKNISPELVLKKSLDREETPEFSLLL 648
Query: 59 VATDRGK 65
+ D GK
Sbjct: 649 MVMDGGK 655
>gi|85725317|gb|ABC79276.1| protocadherin-15-CD3 isoform 1 [Mus musculus]
Length = 1682
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 743 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 798
>gi|62997558|gb|AAY24693.1| protocadherin 15 isoform C [Mus musculus]
Length = 1363
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 173 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 228
>gi|377833047|ref|XP_003689295.1| PREDICTED: protocadherin-15-like [Mus musculus]
Length = 1696
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 656 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 711
>gi|218505743|ref|NP_001136218.1| protocadherin-15 isoform CD3-1 precursor [Mus musculus]
Length = 1682
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 743 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 798
>gi|85725319|gb|ABC79277.1| protocadherin-15-CD3 isoform 2 [Mus musculus]
Length = 1677
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|54013422|dbj|BAD60800.1| protocadherin2-gamma-c6-sCP1 [Danio rerio]
Length = 966
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L++ A+DPD G+N + Y +P S N F + +GEI + LD+E++ SY F V
Sbjct: 258 VLKIKATDPDEGLNGEIEYLFAAHTPESVRNVFRVNVETGEIKVIGGLDYETKKSYTFDV 317
Query: 59 VATDRG 64
A D+G
Sbjct: 318 CAKDKG 323
>gi|410924908|ref|XP_003975923.1| PREDICTED: protocadherin-8-like [Takifugu rubripes]
Length = 997
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L ++A DPD G+N V Y G + P+ F + SG + + +DFES+++YEF V
Sbjct: 260 LLDLNAEDPDEGLNGEVVYGFGHQVPTEIRQLFRVDRKSGRLTLESQIDFESKNTYEFDV 319
Query: 59 VATDRG 64
ATD G
Sbjct: 320 QATDLG 325
>gi|395817815|ref|XP_003782343.1| PREDICTED: protocadherin beta-8 [Otolemur garnettii]
Length = 1217
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ VSA+D D G+N ++Y L ++ N F + ++GEI + + LDFE+ SYE +
Sbjct: 831 VVTVSATDIDIGINGEISYLLFQASEEINKTFRINPLTGEIQLKKQLDFETIQSYEINIE 890
Query: 60 ATDRG 64
A D G
Sbjct: 891 ARDAG 895
>gi|405778352|ref|NP_001258306.1| protocadherin-15 precursor [Rattus norvegicus]
Length = 1791
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 750 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 805
>gi|218505731|ref|NP_001136213.1| protocadherin-15 isoform CD1-10 precursor [Mus musculus]
Length = 1913
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 771
>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
Length = 4584
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R SY+ V
Sbjct: 2822 VIQIRASDLDSGTNGQVMYSLDQSQSVDVIESFAINMETGWITTLKELDHEKRDSYQIKV 2881
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2882 VASDHGEKVQ 2891
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE +F + +SG I I Q LDFE + Y
Sbjct: 942 IMWLEAYDPDLGQSSQVRYSLMDHGEG-----NFDVDKLSGAIRIVQQLDFEKKQVYNLT 996
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 997 VRAKDKGK 1004
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LD+ YE ++A
Sbjct: 164 IARVSATDADIGTNGEFYYSFRD---RTDMFAIHPTSGVVVLTGRLDYMEAKLYEMEILA 220
Query: 61 TDRG 64
DRG
Sbjct: 221 VDRG 224
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD ++ Y+ V A
Sbjct: 1575 VLQVTALDKDKGQNAEVLYSI-ESGNIGNSFTIDPILGSIKTAKELDRSNQVEYDLMVKA 1633
Query: 61 TDRG 64
TD+G
Sbjct: 1634 TDKG 1637
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 837 IIQVEATDKDLGPNGHVTYSIL---TDTDRFSIDSVTGVVKIARPLDREVQHVHYLKIEA 893
Query: 61 TDRGKE 66
D+ KE
Sbjct: 894 RDQAKE 899
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L S F + +SG I + + LD E ++ Y + A
Sbjct: 3138 LTRVQATDADAGLNRKISYSLINSAE--GQFSINELSGIIQLEKPLDRELQAVYTLTLKA 3195
Query: 61 TDRG 64
D+G
Sbjct: 3196 VDQG 3199
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D NA + YTL S + F + +GE+ LD E ++ Y V A
Sbjct: 3036 IMQVSATDADIRSNAEITYTLYGSGAE--KFKLNPDTGELKTLAPLDREEQAIYNLVVKA 3093
Query: 61 TDRG 64
TD G
Sbjct: 3094 TDGG 3097
>gi|380803045|gb|AFE73398.1| protocadherin gamma-A8 isoform 1 precursor, partial [Macaca
mulatta]
Length = 243
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 136 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 195
Query: 60 ATDRG 64
A D G
Sbjct: 196 AEDVG 200
>gi|307197254|gb|EFN78559.1| Protein dachsous [Harpegnathos saltator]
Length = 2617
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+DPD G N + Y + E S F + +++G I A LD E +SSY F VVA
Sbjct: 1140 VMTVRATDPDQGENGKITYAIAEETSWL--FRVDNLTGVITTAGSLDRERQSSYTFLVVA 1197
Query: 61 TDRGK 65
D GK
Sbjct: 1198 MDSGK 1202
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ASD D G+N + Y L E PS T F + S++G + +A+ LD E R+ Y + A+D
Sbjct: 694 LTASDLDSGLNGELRYGLVAEFPS-TCSFAVDSLTGALTLAKSLDREERAEYTLILKASD 752
Query: 63 RG 64
R
Sbjct: 753 RA 754
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V+Y L SP+ F + +G I + Q+LD E+ V A
Sbjct: 271 ILQVTAVDLDTGNNARVSYRLQGSPA----FRINPNTGWIYLVQNLDRETVDRITLTVFA 326
Query: 61 TDRG 64
D G
Sbjct: 327 ADNG 330
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV A D D G NA V Y++ + N F + ++G I LD E R+ Y V A
Sbjct: 479 RVRALDTDFGENASVTYSILKDRDSDGYNVFTIDPITGMIRTKAVLDHEERNVYRVSVKA 538
Query: 61 TDRG 64
TD G
Sbjct: 539 TDAG 542
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+DPD N+++ Y++ +S S F + +G+I + LD E++ +E + A D+
Sbjct: 376 VNATDPDLDKNSLLRYSVVQSNS---SFAVDPDTGKITTREPLDRETKEVHELVLEARDQ 432
Query: 64 GKETQ 68
G ++
Sbjct: 433 GTPSR 437
>gi|85725299|gb|ABC79267.1| protocadherin-15-CD1 isoform 10 [Mus musculus]
Length = 1913
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 771
>gi|85725295|gb|ABC79265.1| protocadherin-15-CD1 isoform 9 [Mus musculus]
Length = 1916
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 771
>gi|403285668|ref|XP_003934135.1| PREDICTED: protocadherin Fat 2 [Saimiri boliviensis boliviensis]
Length = 4369
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L E ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3360 ILTVSAADEDGPLNSDITYSLVEG-NQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRA 3418
Query: 61 TDRGK 65
TD G+
Sbjct: 3419 TDSGQ 3423
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2836 VIQVTAIDKDTGRDGQVSYRLSADPGSNIHELFAIDSESGWITTLQELDCETCQTYNFHV 2895
Query: 59 VATDRGKETQ 68
VA D+G+ Q
Sbjct: 2896 VAYDQGQTIQ 2905
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N +V YT E +F + G+I + + D+++ + Y V+A
Sbjct: 2109 LFQVSATDEDLGTNGVVTYTFAED---YTYFRIDPYLGDISLRKPFDYQALNKYRLKVIA 2165
Query: 61 TDRG 64
D G
Sbjct: 2166 RDGG 2169
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLVDDAHGT--FRVDLMTGALSLERELDFERRAGYNLSLWASDN 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2311 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQRFHVKVR 2370
Query: 60 ATDRG 64
A D+G
Sbjct: 2371 AMDKG 2375
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ESR S++F V D+
Sbjct: 1807 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESRPSFKFCVYVHDQ 1865
Query: 64 G 64
G
Sbjct: 1866 G 1866
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V Y+L + + F + ++ G I + Q LD+ + + + V A
Sbjct: 1594 LLQVRAMDADRGANAEVRYSLLKG-NGEGFFNINALLGIITLTQKLDWANHAPHTLTVKA 1652
Query: 61 TDRG 64
D+G
Sbjct: 1653 EDQG 1656
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3155 VFARDPDQGSNAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3212
Query: 64 G 64
G
Sbjct: 3213 G 3213
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + IA LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTIAAPLDYETTNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|402872877|ref|XP_003900321.1| PREDICTED: protocadherin beta-13, partial [Papio anubis]
Length = 603
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ + F + S++GEI + + LDFE SYE +
Sbjct: 67 VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFEKLQSYEVNIE 126
Query: 60 ATDRG 64
A D G
Sbjct: 127 ARDAG 131
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 278 VSATDRDSGTNAQVTYSL--LPPQDPHLSLTSLVSINADNGHLFALRSLDYEALQGFEFR 335
Query: 58 VVATDRG 64
V A+DRG
Sbjct: 336 VGASDRG 342
>gi|340708971|ref|XP_003393090.1| PREDICTED: cadherin-related tumor suppressor-like [Bombus terrestris]
Length = 5085
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N M+ Y + + N F++ S++G + I + LD++ Y+ + A
Sbjct: 3210 ILTVSATDGDDGPNGMIRYKISAG-NEKNEFFVHSITGAVTILEPLDYDLVQEYKLNITA 3268
Query: 61 TDRGKETQ 68
TD G E +
Sbjct: 3269 TDLGFEPK 3276
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV +D D G+N V Y+L E ++ F + +G+I + ++LD E+ +Y VVA
Sbjct: 1268 LLRVYTTDADEGLNGDVFYSL-EDGNQHGRFAIDEATGQISLTKELDRETTDAYVLTVVA 1326
Query: 61 TDRGKETQ 68
D G ET+
Sbjct: 1327 HDAGLETR 1334
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+++SD D G NA V Y E+P F M ++SG + + LD E + Y +VA
Sbjct: 2891 VIRITSSDLDIGQNANVTYRFTENPGE--KFAMDALSGNVTVNGHLDREEQDEYLLKLVA 2948
Query: 61 TD 62
D
Sbjct: 2949 AD 2950
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+VSA+D D G N V+Y L + T F + S +GEI LD E +SYE V A D
Sbjct: 2790 KVSANDRDSGENGQVSYYLVNDFTET--FVIDSDTGEISTNAKLDREEIASYELIVEARD 2847
Query: 63 RGK 65
+G+
Sbjct: 2848 QGQ 2850
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++A D D G N V Y+ S SR F + ++G++ +LD E+ + Y+ V+A
Sbjct: 633 LTAVDNDQGTNGSVAYSFHSSVSRDYPKTFALDGLTGQLTTKVNLDRETTAEYQILVIAK 692
Query: 62 DRGKETQ 68
D+G Q
Sbjct: 693 DQGTPPQ 699
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G N V Y+L ++ T F + V G + ++ LD E RS+Y V A
Sbjct: 2156 VMAIKAVDRDEGRNGYVEYSLEDT---TLPFTVGPVDGLLRVSGSLDRELRSNYTLEVTA 2212
Query: 61 TDRGK 65
DRG+
Sbjct: 2213 KDRGE 2217
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR A+D D G N+ + + + +R + FY+ ++G + + + LD+E Y V
Sbjct: 1374 LLRFKATDNDLGPNSELAFAISAG-NRRDTFYIDPLTGTLYLRKPLDYEELEKYTLNVTC 1432
Query: 61 TDRG 64
+D G
Sbjct: 1433 SDGG 1436
>gi|218505773|ref|NP_001136232.1| protocadherin-15 isoform CD3-2 precursor [Mus musculus]
Length = 1677
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|218505727|ref|NP_001136211.1| protocadherin-15 isoform CD1-9 precursor [Mus musculus]
Length = 1916
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 771
>gi|148699993|gb|EDL31940.1| protocadherin 15 [Mus musculus]
Length = 1849
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 649 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 704
>gi|85725291|gb|ABC79263.1| protocadherin-15-CD1 isoform 6 [Mus musculus]
Length = 1867
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 667 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 722
>gi|350418958|ref|XP_003492024.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Bombus impatiens]
Length = 4964
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N M+ Y + + N F++ S++G + I + LD++ Y+ + A
Sbjct: 3127 ILTVSATDGDDGPNGMIRYKISAG-NEKNEFFVHSITGAVTILEPLDYDLVQEYKLNITA 3185
Query: 61 TDRGKETQ 68
TD G E +
Sbjct: 3186 TDLGFEPK 3193
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV +D D G+N V Y+L E ++ F + +G+I + ++LD E+ +Y VVA
Sbjct: 1202 LLRVYTTDADEGLNGDVFYSL-EDGNQHGRFAIDEATGQISLTKELDRETTDAYVLTVVA 1260
Query: 61 TDRGKETQ 68
D G ET+
Sbjct: 1261 HDAGLETR 1268
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+++SD D G NA V Y E+P F M ++SG + + LD E + Y +VA
Sbjct: 2808 VIRITSSDLDIGQNANVTYRFTENPGE--KFAMDALSGNVTVDGHLDREEQDEYLLKLVA 2865
Query: 61 TD 62
D
Sbjct: 2866 AD 2867
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+VSA+D D G N V+Y L + T F + S +GEI LD E +SYE V A D
Sbjct: 2707 KVSANDRDSGENGQVSYYLVNDFTET--FVIDSDTGEISTNAKLDREEIASYELIVEARD 2764
Query: 63 RGK 65
+G+
Sbjct: 2765 QGQ 2767
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++A D D G N V Y+ S SR F + ++G++ +LD E+ + Y+ V+A
Sbjct: 567 LTAVDNDQGTNGSVAYSFHSSVSRDYPKTFALDGLTGQLTTKVNLDRETTAEYQILVIAK 626
Query: 62 DRGKETQ 68
D+G Q
Sbjct: 627 DQGTPPQ 633
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G N V Y+L ++ T F + V G + ++ LD E RS+Y V A
Sbjct: 2073 VMAIKAVDRDEGRNGYVEYSLEDT---TLPFTVGPVDGLLRVSGSLDRELRSNYTLEVTA 2129
Query: 61 TDRGK 65
DRG+
Sbjct: 2130 KDRGE 2134
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR A+D D G N+ + + + +R + FY+ ++G + + + LD+E Y V
Sbjct: 1308 LLRFKATDNDLGPNSELAFAISAG-NRRDTFYIDPLTGTLYLRKPLDYEELEKYTLNVTC 1366
Query: 61 TDRG 64
+D G
Sbjct: 1367 SDGG 1370
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 6 ASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
A+D D G+NA + Y+ LGE+ R F ++ +GE+ LD E S Y +VA D
Sbjct: 2397 ATDKDEGLNAKIRYSLLGENSER---FTVEPETGEVLTVVPLDREQTSVYHLTLVAQD 2451
>gi|229442261|gb|AAI72773.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1338
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 752 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 811
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 812 VASDHGEKIQ 821
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 1068 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 1125
Query: 61 TDRG 64
D+G
Sbjct: 1126 VDQG 1129
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 1173 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 1231
Query: 61 TDRG 64
TD G
Sbjct: 1232 TDGG 1235
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 966 IMQISATDADIRSNAEITYTLLGSGAE--KFKLNPDTGELKTSTPLDREEQAVYHLLVRA 1023
Query: 61 TDRG 64
TD G
Sbjct: 1024 TDGG 1027
>gi|218505722|ref|NP_001136209.1| protocadherin-15 isoform CD1-6 precursor [Mus musculus]
Length = 1867
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 667 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 722
>gi|218505715|ref|NP_001136207.1| protocadherin-15 isoform CD1-2 precursor [Mus musculus]
Length = 1938
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|111074522|ref|NP_075604.2| protocadherin-15 isoform CD1-1 precursor [Mus musculus]
gi|225000578|gb|AAI72646.1| Protocadherin 15 [synthetic construct]
Length = 1943
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 743 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 798
>gi|397517980|ref|XP_003829180.1| PREDICTED: protocadherin gamma-C4 [Pan paniscus]
Length = 871
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V Y G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTYYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|297676249|ref|XP_002816052.1| PREDICTED: protocadherin gamma-B1 [Pongo abelii]
Length = 810
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLGVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
>gi|85725287|gb|ABC79261.1| protocadherin-15-CD1 isoform 4 [Mus musculus]
Length = 1936
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
Length = 4968
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2056 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVA 2113
Query: 61 TDRG 64
TD+G
Sbjct: 2114 TDKG 2117
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G+N + Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 698 VSATDPDLGLNGTIKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 755
Query: 64 GK 65
G
Sbjct: 756 GN 757
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2160 IIQVFAADGDEGTNGQVRYGIVDG-NANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQA 2218
Query: 61 TDRG 64
TDRG
Sbjct: 2219 TDRG 2222
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1216 VLRVSASDVDEGNNGLIHYSVIKG-NEERQFAIDSTSGQVTLIGRLDYEATPAYSLVIQA 1274
Query: 61 TDRG 64
D G
Sbjct: 1275 VDSG 1278
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 589 LLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 648
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 649 TDLGSPPQ 656
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1426 VISVTAHDPDADINGQLSYAIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLFELTVKA 1485
Query: 61 TDRG 64
D+
Sbjct: 1486 NDQA 1489
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1324 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1380
Query: 62 DRGK 65
D+G+
Sbjct: 1381 DQGR 1384
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 899 IFQAKAVDPDEGVNGMVVYSLKQNPK--NLFTINEKNGNISLLGPLDVHA-GSYQIEILA 955
Query: 61 TDRG 64
+D G
Sbjct: 956 SDMG 959
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + ++ + F + +GEI + LD E S Y V +
Sbjct: 2674 ILTVSAVDKDSGPNGQLDYEIING-NKEHSFSINHATGEIRSIRPLDREKISQYVLIVKS 2732
Query: 61 TDRGKETQ 68
+DRG +Q
Sbjct: 2733 SDRGSPSQ 2740
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G + LDFE++ SY V A
Sbjct: 3200 VIHLNATDADSGTNAVIAYTIQSSDS--DLFVIDPNTGVVTTQGFLDFETKQSYHLTVKA 3257
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2266 VLQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELQVTQSLDRETKEHFVLLITA 2323
Query: 61 TDRG 64
TD G
Sbjct: 2324 TDSG 2327
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY 54
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y++ S + F + S +G + +A+ LD+E +E V ATD
Sbjct: 3098 VSARDRDTAMNGLIRYSI-SSGNEEGIFAINSSTGVLTLAKALDYELCQKHEMTVSATDG 3156
Query: 64 G 64
G
Sbjct: 3157 G 3157
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+ASD D NA++ G S F + +G+I + LD E++ +Y VVA
Sbjct: 2370 VILVNASDIDASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKENYTLVVVA 2424
Query: 61 TDRG 64
+D G
Sbjct: 2425 SDAG 2428
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1746 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1803
Query: 61 TD 62
D
Sbjct: 1804 DD 1805
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D GVNA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2780 RVTTSDEDIGVNAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2836
Query: 63 RG 64
G
Sbjct: 2837 SG 2838
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1850 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRMLDYEAQQYYILTVRAEDG 1908
Query: 64 GKE 66
G +
Sbjct: 1909 GGQ 1911
>gi|357623110|gb|EHJ74394.1| dachsous [Danaus plexippus]
Length = 463
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G N ++ Y++ S R N F + +GEI + + LDFE++ +E VV
Sbjct: 127 VLKVFAIDSDEGENGVIEYSINRRQSDRDNMFKINPDTGEIIVNKLLDFETKELHELVVV 186
Query: 60 ATDRGKE 66
A D+G +
Sbjct: 187 ARDKGAQ 193
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 3 RVSASDPDCGVN-AMVNYTLGESPSRTNHFYMKSVSGEI---CIAQDLDFESRSSYEFPV 58
R+S DPD A VN TL HF +++ I +A LD ES+S+Y V
Sbjct: 240 RISVHDPDSKTEYANVNVTLN---GGDGHFDLRTHDNIIYLVVVALPLDRESQSAYTLNV 296
Query: 59 VATDRG 64
VATD+G
Sbjct: 297 VATDKG 302
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N+ + Y++ SP +++ F + SG + +D E+ + VVA
Sbjct: 345 VLQVSAFDADEGENSEIRYSILPSP-QSDWFSIDERSGLVTTRVRVDCETNPMPKLTVVA 403
Query: 61 TDRGK 65
+DRG
Sbjct: 404 SDRGN 408
>gi|341941234|sp|Q99PJ1.2|PCD15_MOUSE RecName: Full=Protocadherin-15; Flags: Precursor
Length = 1943
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 743 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 798
>gi|301753473|ref|XP_002912584.1| PREDICTED: protocadherin-12-like [Ailuropoda melanoleuca]
Length = 1201
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A D D G+N ++Y + +SP ++ + S +G++ + LD+E +S+EF V+A
Sbjct: 479 LITVKAHDADLGINGKISYRIQDSPV-SHLVAIDSDTGDVTAQRSLDYEQMASFEFRVIA 537
Query: 61 TDRGK 65
DRG+
Sbjct: 538 EDRGQ 542
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G N V + L + P + F + + +G + + Q LD+E +YE V
Sbjct: 263 LINLTATDPDQGPNGEVEFFLSKHVPPEVLDTFSIDAKTGRVILRQPLDYEKNPAYEVDV 322
Query: 59 VATDRG 64
A D G
Sbjct: 323 QARDLG 328
>gi|149068442|gb|EDM17994.1| dachsous 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 3278
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV+A DPD G N V Y+L + T+ F + SG I A LD+E + VVA
Sbjct: 473 VVRVTARDPDQGTNGQVTYSLAPG-THTHWFSIDPTSGIITTAATLDYELEPQPQLIVVA 531
Query: 61 TDRG 64
TD G
Sbjct: 532 TDGG 535
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L V A DPD G A V+Y L HF + + +G + + + LD E R+ + VVA+
Sbjct: 1545 LHVVARDPDLGEAARVSYRLAAG--GDGHFRLHATTGALSVVRPLDREQRAEHVLTVVAS 1602
Query: 62 DRG 64
D G
Sbjct: 1603 DHG 1605
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A DPD G N V Y LG F ++ SGE+ A LD E +SY F V A
Sbjct: 1854 LLQLQAHDPDEGDNGRVMYYLGAG--TAGAFLLEPTSGELSTATALDREHCASYAFSVTA 1911
Query: 61 TD 62
D
Sbjct: 1912 VD 1913
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 3 RVSASDPDCGVNAMVNYTL--GESPSRTNHFYMK---SVSGEICIAQDLDFESRSSYEFP 57
R+S SDPD G A VN +L GE HF + SV +C+A+ LD E R Y
Sbjct: 368 RISVSDPDDGDFAHVNVSLEGGE-----GHFALSTQDSVIYLVCVARRLDREERDVYNLR 422
Query: 58 VVATDRG 64
V ATD G
Sbjct: 423 VTATDSG 429
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+D D G N + Y+L + + F + +GE+ Q LD E +SS++ V D
Sbjct: 1107 RVFATDKDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSFQLLVQVQD 1166
Query: 63 RG 64
G
Sbjct: 1167 AG 1168
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDF-ESRSSYEFP 57
L+V+A+D D G +++Y+LG S + F + + SGE+C + LD + SS++F
Sbjct: 578 FLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGEVCTTRILDRDQGPSSFDFT 637
Query: 58 VVATDRG 64
V A D G
Sbjct: 638 VTAIDGG 644
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN-HFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D G N V Y + S + F + + +G + + + LDFE R +E V
Sbjct: 255 VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGFLKLERPLDFEQRRVHELVVQ 314
Query: 60 ATDRGKETQ 68
A D G +
Sbjct: 315 ARDGGAHPE 323
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNY-TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+ + ASDPD G+N + Y LG PS F + SGE + LD E +++ +
Sbjct: 1749 LTTLRASDPDGGLNGQLQYRILGGDPS--GAFALDLTSGEFGTTRPLDREVEPAFQLQIE 1806
Query: 60 ATDRGK 65
A D G+
Sbjct: 1807 ARDGGQ 1812
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V ASD D G + +V++TL S F + SG + +A LD E+++ ++ V A
Sbjct: 2601 LLHVEASDADPGPHGLVHFTL-SSGDPLGLFELDENSGALRLAHPLDCETQAQHQLVVQA 2659
Query: 61 TD 62
D
Sbjct: 2660 AD 2661
>gi|85725297|gb|ABC79266.1| protocadherin-15-CD1 isoform 7 [Mus musculus]
Length = 1933
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|441596385|ref|XP_004093139.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C5 [Nomascus
leucogenys]
Length = 879
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RACDQGQ 327
>gi|242397499|ref|NP_001101014.2| dachsous 1 precursor [Rattus norvegicus]
Length = 3291
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV+A DPD G N V Y+L + T+ F + SG I A LD+E + VVA
Sbjct: 486 VVRVTARDPDQGTNGQVTYSLAPG-THTHWFSIDPTSGIITTAATLDYELEPQPQLIVVA 544
Query: 61 TDRG 64
TD G
Sbjct: 545 TDGG 548
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L V A DPD G A V+Y L HF + + +G + + + LD E R+ + VVA+
Sbjct: 1558 LHVVARDPDLGEAARVSYRLAAG--GDGHFRLHATTGALSVVRPLDREQRAEHVLTVVAS 1615
Query: 62 DRG 64
D G
Sbjct: 1616 DHG 1618
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A DPD G N V Y LG F ++ SGE+ A LD E +SY F V A
Sbjct: 1867 LLQLQAHDPDEGDNGRVMYYLGAG--TAGAFLLEPTSGELSTATALDREHCASYAFSVTA 1924
Query: 61 TD 62
D
Sbjct: 1925 VD 1926
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 3 RVSASDPDCGVNAMVNYTL--GESPSRTNHFYMK---SVSGEICIAQDLDFESRSSYEFP 57
R+S SDPD G A VN +L GE HF + SV +C+A+ LD E R Y
Sbjct: 381 RISVSDPDDGDFAHVNVSLEGGE-----GHFALSTQDSVIYLVCVARRLDREERDVYNLR 435
Query: 58 VVATDRG 64
V ATD G
Sbjct: 436 VTATDSG 442
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+D D G N + Y+L + + F + +GE+ Q LD E +SS++ V D
Sbjct: 1120 RVFATDKDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSFQLLVQVQD 1179
Query: 63 RG 64
G
Sbjct: 1180 AG 1181
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDF-ESRSSYEFP 57
L+V+A+D D G +++Y+LG S + F + + SGE+C + LD + SS++F
Sbjct: 591 FLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGEVCTTRILDRDQGPSSFDFT 650
Query: 58 VVATDRG 64
V A D G
Sbjct: 651 VTAIDGG 657
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN-HFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D G N V Y + S + F + + +G + + + LDFE R +E V
Sbjct: 268 VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGFLKLERPLDFEQRRVHELVVQ 327
Query: 60 ATDRGKETQ 68
A D G +
Sbjct: 328 ARDGGAHPE 336
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNY-TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+ + ASDPD G+N + Y LG PS F + SGE + LD E +++ +
Sbjct: 1762 LTTLRASDPDGGLNGQLQYRILGGDPS--GAFALDLTSGEFGTTRPLDREVEPAFQLQIE 1819
Query: 60 ATDRGK 65
A D G+
Sbjct: 1820 ARDGGQ 1825
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V ASD D G + +V++TL S F + SG + +A LD E+++ ++ V A
Sbjct: 2614 LLHVEASDADPGPHGLVHFTL-SSGDPLGLFELDENSGALRLAHPLDCETQAQHQLVVQA 2672
Query: 61 TD 62
D
Sbjct: 2673 AD 2674
>gi|218505729|ref|NP_001136212.1| protocadherin-15 isoform CD1-7 precursor [Mus musculus]
Length = 1933
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|218505717|ref|NP_001136208.1| protocadherin-15 isoform CD1-4 precursor [Mus musculus]
Length = 1936
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|348536028|ref|XP_003455499.1| PREDICTED: protocadherin-8 [Oreochromis niloticus]
Length = 982
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV A DPD G+N V Y G S F++ SG++ + +DFE R SYE +
Sbjct: 259 VLRVHAFDPDDGINGEVMYAFSDGLSLEAARLFHLDPHSGDVTLKALVDFEKRRSYELSI 318
Query: 59 VATDRG 64
A+D G
Sbjct: 319 KASDLG 324
>gi|334311067|ref|XP_003339575.1| PREDICTED: protocadherin alpha-8 [Monodelphis domestica]
Length = 841
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+N + Y+ SP + F + +GEI I + LDFE +SY+F V
Sbjct: 261 VIQLNASDADEGINGEIVYSFNSLASPLINDKFQINPDTGEISIQRYLDFEDINSYKFRV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+ VSASDPD NA+V+Y+L GE P +++ + SG++ Q LD E +
Sbjct: 474 IFTVSASDPDAEENALVSYSLVERQVGERP-LSSYVSVHLESGKVYALQPLDHEEIELLQ 532
Query: 56 FPVVATDRG 64
F V A D G
Sbjct: 533 FQVSARDSG 541
>gi|332023167|gb|EGI63423.1| Cadherin-related tumor suppressor [Acromyrmex echinatior]
Length = 1862
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV +D D G+N V Y+L E ++ HF + +G+I + ++LD E +Y VVA
Sbjct: 1243 LLRVYTTDADEGLNGDVFYSL-EDGNQYGHFVIDEATGQISLMKELDREMSDTYVLTVVA 1301
Query: 61 TDRGKETQ 68
D G ET+
Sbjct: 1302 HDAGLETR 1309
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G+NA + Y G S + N F + S +G I LD E + S E V A D
Sbjct: 540 ISATDADSGLNARIYYEFG-SGNEQNWFAIDSDTGLITTVATLDREVQGSIELHVSARDG 598
Query: 64 GKETQ 68
G T+
Sbjct: 599 GPNTK 603
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR A+D D G N+ + + + R + FY+ ++G + + + LD+E + Y +
Sbjct: 1349 LLRFKATDNDLGPNSELTFAISAGNKR-DTFYIDPLTGILYLRKPLDYEEQIRYTLNITC 1407
Query: 61 TDRG 64
+D G
Sbjct: 1408 SDGG 1411
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A DPD G N +V+Y++ E + F + SG I +D E ++ V
Sbjct: 1454 IVTITAEDPDSGDNGVVSYSILSQEPQDQMRRFGINPSSGVIHTLLPIDREEVDTFNLVV 1513
Query: 59 VATDRGK 65
VATD+ +
Sbjct: 1514 VATDQAQ 1520
>gi|326928556|ref|XP_003210443.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Meleagris
gallopavo]
Length = 4281
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D +N + Y++ E + HF ++ SG+I IA+ LD E SSY V A
Sbjct: 3349 ILTVSADDLDGTMNNQITYSIVEG-NPQGHFAIQPKSGQISIAKHLDREEISSYSLTVRA 3407
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 3408 TDNGHPAQ 3415
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V+A+D D G + V Y+L ES + F + +G I ++LD E++ +Y F VV
Sbjct: 2824 VIQVTANDQDTGSDGQVTYSLEAESGNLRGLFTIDGETGWITTLKELDCETQETYRFYVV 2883
Query: 60 ATDRGKETQ 68
ATD G++ Q
Sbjct: 2884 ATDHGRKVQ 2892
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+DPD G NA + Y+L P F + + +GE+ + LD E + +Y A
Sbjct: 3037 ILKISATDPDVGSNAQITYSL-HXPG-AEEFRLGAHTGELTTSAPLDREQKPTYHLVAKA 3094
Query: 61 TDRG 64
TD G
Sbjct: 3095 TDGG 3098
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N MV+Y + + S T F+ + + +G+I AQ LD+E + V
Sbjct: 2298 VVQIFASDKDSGRNKMVSYQILDDGSDTTKFFNIDTSTGQITTAQALDYEETQQFRMKVR 2357
Query: 60 ATDRG 64
A D G
Sbjct: 2358 AADHG 2362
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G NA++ Y+ E +F + G+I + + LD+ + + Y V+A
Sbjct: 2096 LFQVSATDKDIGNNAVITYSFAED---YKYFRIDPYLGDISLKKPLDYHALNKYSLRVIA 2152
Query: 61 TDRGK 65
D G+
Sbjct: 2153 KDNGE 2157
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D G+NA V Y+L +S + HF ++ +G I + + L S++E V ATD+
Sbjct: 3142 VSARDLDEGLNAEVVYSLSDSAN--GHFSIEETTGVIRLEKPLKDSQHSAFELTVCATDQ 3199
Query: 64 G 64
G
Sbjct: 3200 G 3200
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A DPD G V Y+L F++ ++G + + ++LD+E + SY V
Sbjct: 946 LLFLEAFDPDAGSGGEVRYSLVNDEEMM--FHIDKLTGALRLEKELDYEKKDSYNLTVQV 1003
Query: 61 TDRGK 65
+D GK
Sbjct: 1004 SDSGK 1008
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA ++Y+L ++ + F + SG I +AQ LD + + V A
Sbjct: 1581 ILQVRALDQDQGANAEIHYSL-QAGNAEGFFSIDPHSGIITVAQKLDPSKQERFTLIVKA 1639
Query: 61 TDRG 64
D+G
Sbjct: 1640 EDQG 1643
>gi|149017351|gb|EDL76402.1| rCG49295, isoform CRA_al [Rattus norvegicus]
Length = 761
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF V
Sbjct: 146 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDV 205
Query: 59 VATDRG 64
A D G
Sbjct: 206 RARDGG 211
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 362 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 421
Query: 60 ATDRG 64
A DRG
Sbjct: 422 ARDRG 426
>gi|85725282|gb|ABC79259.1| protocadherin-15-CD1 isoform 2 [Mus musculus]
Length = 1938
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|12483917|gb|AAG53891.1|AF281899_1 protocadherin [Mus musculus]
Length = 1943
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 743 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 798
>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
rotundus]
Length = 4593
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V ASD D G N V Y+L S S T F + +G I ++LD E R +Y+ V
Sbjct: 2826 VIQVRASDLDSGTNGQVMYSLDPSQSVDITESFAINMETGWITTLKELDHEKRDNYQIKV 2885
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2886 VASDHGEKVQ 2895
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A DPD G ++ V Y+L + P N F + +SG + I Q LDFE + Y V A
Sbjct: 944 IMWLEAYDPDLGQSSQVRYSLLD-PGEGN-FDVDKLSGAVRIVQQLDFEKKQVYNLTVRA 1001
Query: 61 TDRGK 65
D+GK
Sbjct: 1002 KDKGK 1006
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD YE ++A
Sbjct: 166 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGTIVLTGRLDHAETPRYEMEILA 222
Query: 61 TDRG 64
DRG
Sbjct: 223 VDRG 226
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+DPD G+N + Y+L +S F + SG I + + LD E ++ Y + A
Sbjct: 3142 LTRVQATDPDAGLNRKIVYSLPDSAD--GQFSISESSGIIQLEKPLDRELQAVYTLTLKA 3199
Query: 61 TDRG 64
TD+G
Sbjct: 3200 TDQG 3203
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD ++ Y+ V A
Sbjct: 1579 VLQVTALDKDKGRNAEVVYSI-ESGNIGNSFTIDPILGSIKTAKELDRSNQVEYDLIVKA 1637
Query: 61 TDRG 64
TD+G
Sbjct: 1638 TDKG 1641
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS +F + S +G I LD+E S++ F V
Sbjct: 1790 LVIRATDADRESNALLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDYEETSTFHFTVQVH 1848
Query: 62 DRG 64
D G
Sbjct: 1849 DMG 1851
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y+L + T+ F + SV+G + + + LD E + + V A
Sbjct: 839 IIQVEATDRDLGPNGQVTYSLL---TDTDTFSIDSVTGVVTVVRPLDPEVQHVHYLKVEA 895
Query: 61 TDRGKE 66
D+ E
Sbjct: 896 RDQATE 901
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D NA + YTL G + F + +GE+ LD E ++ Y V
Sbjct: 3040 IMQVSATDADIRSNAEITYTLFGPGAEK---FKLNPDTGELKTLAPLDREEQAVYHLVVK 3096
Query: 60 ATDRG 64
ATD G
Sbjct: 3097 ATDGG 3101
>gi|348520344|ref|XP_003447688.1| PREDICTED: protocadherin-1-like [Oreochromis niloticus]
Length = 1215
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G NA + Y++ E P+ F + S +GE+ + LD E + YEF V+A
Sbjct: 496 VLDIVATDADSGTNAELFYSITE-PTARRLFKINSSTGEVRVNHSLDREEKERYEFRVIA 554
Query: 61 TDRG 64
D+G
Sbjct: 555 ADKG 558
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D G+N ++Y+L + S S + +G + + +D E + +F VV
Sbjct: 270 VLQVKANDADTGLNGEIDYSLHQASESVQRLLRIDRATGIVYVKGLVDREEENFLKFFVV 329
Query: 60 ATDRGKETQ 68
A DRG ++
Sbjct: 330 ARDRGPNSK 338
>gi|218505724|ref|NP_001136210.1| protocadherin-15 isoform CD1-8 precursor [Mus musculus]
Length = 1896
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 701 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 756
>gi|85725305|gb|ABC79270.1| protocadherin-15-CD2 isoform 3 [Mus musculus]
Length = 1162
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 382 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 437
>gi|119514192|gb|ABL75855.1| protocadherin 2A15 [Takifugu rubripes]
Length = 938
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++RV+A+D D G+N V+Y+ G S+ + + + +GEI + LD+E SYE +
Sbjct: 263 IIRVNATDMDDGLNGDVSYSFGNVNSKVRELFDVNAATGEIIVKGKLDYEVDDSYEIDIQ 322
Query: 60 ATDRG 64
A+D G
Sbjct: 323 ASDSG 327
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ V+A D D G NA+++Y + S T + +G+I + DFE+ +++F
Sbjct: 476 LFSVNAQDGDEGDNAVISYQIARDSSTDIKATTFLNINQDNGDILALKSFDFETLKTFQF 535
Query: 57 PVVA 60
VVA
Sbjct: 536 QVVA 539
>gi|85725293|gb|ABC79264.1| protocadherin-15-CD1 isoform 8 [Mus musculus]
Length = 1896
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 701 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 756
>gi|149017350|gb|EDL76401.1| rCG49295, isoform CRA_ak [Rattus norvegicus]
Length = 823
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF V
Sbjct: 146 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDV 205
Query: 59 VATDRG 64
A D G
Sbjct: 206 RARDGG 211
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 362 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 421
Query: 60 ATDRG 64
A DRG
Sbjct: 422 ARDRG 426
>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
sapiens]
Length = 2228
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 1218 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 1277
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 1278 VASDHGEKIQ 1287
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 1534 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 1591
Query: 61 TDRG 64
D+G
Sbjct: 1592 VDQG 1595
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 1639 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 1697
Query: 61 TDRG 64
TD G
Sbjct: 1698 TDGG 1701
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 1432 IMQISATDADIRSNAEITYTLLGSGAE--KFKLNPDTGELKTSTPLDREEQAVYHLLVRA 1489
Query: 61 TDRG 64
TD G
Sbjct: 1490 TDGG 1493
>gi|363746707|ref|XP_001235607.2| PREDICTED: protocadherin beta-14-like, partial [Gallus gallus]
Length = 460
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A D D G+N V+Y + +S +++ F + S +GEI + + LDFE+ +E V
Sbjct: 198 VLRVMAMDADVGINGDVSYQIIQSVGQSHSAFAINSTNGEIRVREPLDFEASQKHELSVR 257
Query: 60 ATDRG 64
ATD G
Sbjct: 258 ATDGG 262
>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
Length = 4980
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREDVSNYTLMVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGSNGLIHYSVIKG-NEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGPNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLVLGATDRDLGDNGTVRFSLQEAETVQKSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSISGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGKLSYAIIQQMPRGNHFGIDEVKGTIYTTAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGNISLLGSLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2173 IIQVYAADGDEGTNGQVRYGI-VGGNVNQEFRIDSVTGTITVAKPLDREKTPTYFLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + V A
Sbjct: 2279 ILQVLARDDDQGSNSQISYVLFGG-NEDNAFTL-SASGELRVTQSLDRETKEHFVLTVTA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + ++ N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNG-NQENSFSINHATGEIRSIRPLDREKVSQYILTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGIITTQGFLDFETKQSYHLTVKA 3270
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV+
Sbjct: 2383 VLLVNASDADASTNAVIRIIGGNS-----QFTINPSTGQIITSALLDREAKENYTLVVVS 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y + S + F + S +G + +A+ LD+E +E + ATD
Sbjct: 3111 VSARDRDAAMNGLIRYGI-SSGNEGGVFAINSSTGVLILAKALDYEQCQKHEMTISATDG 3169
Query: 64 G 64
G
Sbjct: 3170 G 3170
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY-------- 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2893 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2949
Query: 55 EFPVVATDRGK 65
F V ++DRG
Sbjct: 2950 SFIVTSSDRGN 2960
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N V Y++ E + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEVAYSIAEG--NAGDAFGVFPDGQLYIKSELDRELQDRYVLLVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D GVNA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDVGVNAISRYSIMDT---SLPFTINPSTGDIVISRPLNREDTDLYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
>gi|340374587|ref|XP_003385819.1| PREDICTED: hypothetical protein LOC100641168 [Amphimedon
queenslandica]
Length = 7953
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 4 VSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
VSASD D G+NA ++Y++ PS F + S SGEI Q D E Y F V AT
Sbjct: 3187 VSASDADSGINADISYSILSVHPPSHYPSFTINSTSGEITSTQSFDREETDEYTFMVAAT 3246
Query: 62 DRGK 65
D G
Sbjct: 3247 DTGH 3250
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D G N+ + Y L + T+ F + S +G++ LDFESR Y+ VVA
Sbjct: 5136 ILTVEATDADYGSNSQITYILQ---THTDLFSIDSSTGQLRSLVGLDFESRCFYQLQVVA 5192
Query: 61 TDRGK 65
D G
Sbjct: 5193 VDGGS 5197
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
++A+D D NA + YTL + P + F + ++GEI + LD+E +SY F + TD
Sbjct: 3491 LTATDIDQLSNAKLTYTLSQ-PDPSLPFAINPLTGEINLTSSLDYELVTSYSFNAIVTDG 3549
Query: 64 GK 65
G+
Sbjct: 3550 GE 3551
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+D D N ++Y+ E+P +F + + +G I A +L+ E + SY V+ATD
Sbjct: 4933 VSATDLDSTSNGEISYSF-ENPDTLQYFTIDNTTGVIRTASELNREEQQSYTLTVLATDA 4991
Query: 64 G 64
G
Sbjct: 4992 G 4992
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A+DPD G N + Y+L + + F + V+G+I LD E+ SS F V A
Sbjct: 5034 IVTVNATDPDNGSNGSITYSLSNTVTL---FRIDGVTGDIYAIGSLDRETTSSQVFVVYA 5090
Query: 61 TDRGKETQ 68
D G ++
Sbjct: 5091 ADGGNPSR 5098
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SASD D G NA + ++L +S + FY+ S + A LD ES S Y F VVA
Sbjct: 3593 IIQLSASDVDSGSNADITFSLIDS---SLPFYING-SYVLLGASSLDRESVSEYTFNVVA 3648
Query: 61 TDRGKETQ 68
TD G ++
Sbjct: 3649 TDGGHPSR 3656
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D G N+ + Y + + T F + + +G I + +LD+E+ +S F V+A
Sbjct: 6228 ILTVQARDVDSGSNSRIVYEI----TGTVTFIIDATTGVISLVGELDYETETSIVFDVLA 6283
Query: 61 TDRGKETQ 68
D G + Q
Sbjct: 6284 RDSGIQEQ 6291
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 4 VSASDPDCGVNAMVNYTL-----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
V+A+DPD G N V Y + GE+ F + +G I + LD E+ SSY +
Sbjct: 6435 VTATDPDEGENGTVTYAIVGGNVGEA------FTIMPSNGMIRVNGPLDHETVSSYNLTL 6488
Query: 59 VATDRGKET 67
VA+D G T
Sbjct: 6489 VASDGGGLT 6497
>gi|334311065|ref|XP_001377243.2| PREDICTED: protocadherin alpha-8-like [Monodelphis domestica]
Length = 809
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+N + Y+ SP + F + +GEI I + LDFE +SY+F V
Sbjct: 261 VIQLNASDADEGINGEIVYSFNSLASPLINDKFQINPDTGEISIQRYLDFEDINSYKFRV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+ VSASDPD NA+V+Y+L GE P +++ + SG++ + Q LD E +
Sbjct: 474 IFTVSASDPDAEENALVSYSLVERQVGERP-LSSYVSVHLESGKVYVLQPLDHEEIELLQ 532
Query: 56 FPVVATDRG 64
F V A D G
Sbjct: 533 FQVSARDSG 541
>gi|218505737|ref|NP_001136215.1| protocadherin-15 isoform CD2-2 precursor [Mus musculus]
Length = 1518
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|55250061|gb|AAH85793.1| Pcdha4 protein [Rattus norvegicus]
Length = 686
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D G N V Y+ SP+ N F++ V+GEI + +DFE +SYE +
Sbjct: 261 VVKVNASDLDEGANGEVMYSFSTDISPNVKNKFHIDPVTGEIAVKGYIDFEECTSYEILI 320
Query: 59 VATDRGK 65
D+G+
Sbjct: 321 EGIDKGQ 327
>gi|322789017|gb|EFZ14475.1| hypothetical protein SINV_04268 [Solenopsis invicta]
Length = 411
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N M+ Y + R N F++ S +G I I + LD++ Y + A
Sbjct: 300 ILTVSAVDGDSGPNGMIRYRISAGNER-NEFFVNSTTGAITILEPLDYDLVQEYRLNITA 358
Query: 61 TDRGKETQ 68
TD G E +
Sbjct: 359 TDLGFEPK 366
>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
sapiens]
Length = 3377
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVNIARPLDRELQHEHSLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 IMQISATDADIRSNAEITYTLLGSGAE--KFKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSII-SGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
>gi|85725303|gb|ABC79269.1| protocadherin-15-CD2 isoform 2 [Mus musculus]
Length = 1518
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|348557432|ref|XP_003464523.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Cavia
porcellus]
Length = 4356
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P + H F + S SG I ++LD E+ +Y F V
Sbjct: 2818 VIQVTANDQDTGNDGQVSYRLSAEPGSSVHELFAIDSESGWITTLKELDCETHQTYRFHV 2877
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2878 VAFDHGQTIQ 2887
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3342 ILTVSATDEDGPLNSAITYSLVGG-NQLGHFTIHPKKGELQVAKALDWEQTSSYSLKLRA 3400
Query: 61 TDRGK 65
TD G+
Sbjct: 3401 TDSGQ 3405
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGHNRDVSYEIVEDGSDASKFFQINGSTGEMVTLQELDYEAQRHFHVKVR 2350
Query: 60 ATDRG 64
ATDRG
Sbjct: 2351 ATDRG 2355
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + +D
Sbjct: 947 LDASDPDLGPAGEVQYVLSDDIHGT--FRVDPMTGALSLEKELDFERRAGYNLSLWVSDS 1004
Query: 64 GK 65
GK
Sbjct: 1005 GK 1006
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y +R++ F + SG + +A L+ R YE V+A D
Sbjct: 169 KVTATDADLGQNAEFYYAFN---TRSDIFAIHPTSGVVTVAGKLNVTWRGKYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G + V Y E +F + G+I + + D+++ + Y VVA
Sbjct: 2089 LFQVSATDRDLGASGTVTYAFTED---YTYFRIDPYVGDISLKKPFDYQALNKYRLKVVA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 LDGG 2149
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F M +GE+ LD E + Y A
Sbjct: 3032 ILKVSATDLDTDTNAQITYSL-HGPG-AHEFKMGPHTGELTTLTALDRERKDMYSLVAKA 3089
Query: 61 TDRG 64
TD G
Sbjct: 3090 TDGG 3093
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D NA++ Y + + P + F + G + + ++D+ESR ++F V D+
Sbjct: 1787 VRASDKDQEANALLIYKILD-PEASKFFKIDPSMGTLTVLSEIDYESRPLFQFNVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ S Y +
Sbjct: 734 LARLAAADPDAGFNGQLVYVITDG-NEDGCFDIELDTGLLMVAAPLDYETTSFYLLNITV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|269785153|ref|NP_001161532.1| FAT tumor suppressor-like protein [Saccoglossus kowalevskii]
gi|268054049|gb|ACY92511.1| FAT tumor suppressor-like protein [Saccoglossus kowalevskii]
Length = 1331
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D G N V YT+ + R N F++ S SG I I +LD E S+Y + A
Sbjct: 58 VLQVIATDADSGFNGDVIYTI-QRGDRLNQFHIGSKSGLISITSELDREQMSAYTLTIRA 116
Query: 61 TDRGKETQ 68
+D+G + Q
Sbjct: 117 SDQGHDPQ 124
>gi|397518002|ref|XP_003829189.1| PREDICTED: protocadherin beta-5 [Pan paniscus]
Length = 795
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEF 56
RVSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 471 RVSATDRDSGTNAQVTYSL--LPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEF 528
Query: 57 PVVATDRG 64
V ATDRG
Sbjct: 529 RVGATDRG 536
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D G V Y L + T F + +GEI + + LDFE+ Y +VATD
Sbjct: 264 VSARDLDAGAYGSVAYALFQGDEVTQPFVIDEKTGEIRLKRALDFEATPYYNVEIVATDG 323
Query: 64 G 64
G
Sbjct: 324 G 324
>gi|332234763|ref|XP_003266573.1| PREDICTED: protocadherin gamma-B1 [Nomascus leucogenys]
Length = 810
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVLATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLGVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
>gi|332030986|gb|EGI70612.1| Protein dachsous [Acromyrmex echinatior]
Length = 2470
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A DPD GVN + Y + E S F + +++G + A LD E +S+Y F VVA
Sbjct: 1001 VMSVKAIDPDQGVNGKITYAIAEETSWL--FRVDNLTGVVTTAGPLDRERQSNYTFLVVA 1058
Query: 61 TDRG 64
TD G
Sbjct: 1059 TDSG 1062
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA DPD G N+++ YT+ ++ S F + +GEI + LD E++S +E + A D+
Sbjct: 254 VSAIDPDIGKNSLLRYTVVQANS---SFTVDPDTGEIITREPLDRETKSVHELVLEARDQ 310
Query: 64 GKETQ 68
G ++
Sbjct: 311 GTPSR 315
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSA D D GVN + Y+L + F + +GE+ + L ++ +Y V+A
Sbjct: 1106 ILRVSAKDADDGVNGDIVYSLINEQEKP-KFRIHPSTGEVTASLSLSQDNGKTYYLEVLA 1164
Query: 61 TDRG 64
D+G
Sbjct: 1165 QDKG 1168
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
RV A D D G NA V Y++ + N F + ++G I LD E R+ Y + A
Sbjct: 357 RVRAMDMDLGENASVTYSIPKDRDSDGYNVFTIDPITGMIRTKAVLDHEERNVYRVSIRA 416
Query: 61 TDRG 64
TD G
Sbjct: 417 TDAG 420
>gi|297714460|ref|XP_002833664.1| PREDICTED: protocadherin-16, partial [Pongo abelii]
Length = 598
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV+A DPD G N V Y+L + T+ F + SG I A LD+E + VVA
Sbjct: 491 VVRVTARDPDQGTNGQVTYSLAPG-AHTHWFSIDPTSGIITTAASLDYELEPQPQLIVVA 549
Query: 61 TDRG 64
TD G
Sbjct: 550 TDGG 553
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 3 RVSASDPDCGVNAMVNYTL--GESPSRTNHFYMK---SVSGEICIAQDLDFESRSSYEFP 57
R+S SDPD G A VN +L GE HF + SV +C+A+ LD E R +Y
Sbjct: 386 RISVSDPDDGDFAHVNVSLEGGE-----GHFALSTQDSVIYLVCVARRLDREERDAYNLR 440
Query: 58 VVATDRG 64
V ATD G
Sbjct: 441 VTATDSG 447
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D GVN V Y + S + F + + +G + + Q LDFE R +E V
Sbjct: 273 VLQVFASDADDGVNGAVTYEINRRQSEGDGPFSIDAHTGLLRLEQPLDFEQRRVHELVVQ 332
Query: 60 ATDRGKETQ 68
A D G +
Sbjct: 333 ARDGGAHPE 341
>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
Length = 4981
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLMVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G+N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGLNGTVRYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTARDPDADINGQLSYTIVQQMPRGNHFGIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + SVSG + LD E + Y V+A
Sbjct: 602 LLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDSVSGRLSTISSLDREEQGFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + + + F + SV+G I +A+ LD E +Y V A
Sbjct: 2173 IIQVCATDGDEGTNGQVRYGIVDGDAN-QEFRIDSVTGAITVAKPLDREKTPTYFLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y + + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYYVIKG-NEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFTINEKNGNISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDDDSGTNAVIAYTIQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDQGSNSKLSYVLFGG-NEDNAFTL-SASGELRVTQSLDRETKEHFVLVITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDAG 2340
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY-------- 54
+VSASDPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2893 QVSASDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2949
Query: 55 EFPVVATDRGK 65
F V ++DRG
Sbjct: 2950 SFIVTSSDRGN 2960
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y++ S + F + S +G + +A+ LD+E +E + ATD
Sbjct: 3111 VSARDRDAAMNGLIRYSI-SSGNEEGIFAINSSTGVLTLAKALDYELCQKHEMTISATDG 3169
Query: 64 G 64
G
Sbjct: 3170 G 3170
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASTNAVIRLIGGNS-----QFTINPSTGQIITSALLDRETKENYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYIVSED-DEDGIFFLNPVTGVFNLTRILDYEAQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
>gi|444525563|gb|ELV14089.1| Protocadherin gamma-C4 [Tupaia chinensis]
Length = 865
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+N++++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNSLISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRG 64
A DRG
Sbjct: 537 ARDRG 541
>gi|380801529|gb|AFE72640.1| protocadherin gamma-A9 isoform 1 precursor, partial [Macaca
mulatta]
Length = 298
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 136 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 195
Query: 60 ATDRG 64
A D G
Sbjct: 196 AEDGG 200
>gi|297295304|ref|XP_001092006.2| PREDICTED: putative protocadherin beta-18 [Macaca mulatta]
Length = 734
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA+V Y+L PS+ H + S+ SG + + LD+E+ +EF
Sbjct: 420 VSATDRDSGTNALVTYSL--LPSQDPHLPLPSLVSINADSGHLFALRSLDYEALQEFEFR 477
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 478 VGATDRG 484
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D G+N ++Y+ S F + ++GE+ + LDFE SY +
Sbjct: 207 IIKVSATDLDAGINGELSYSFSHVSRDVRKTFEIHPIAGEVYLKAPLDFEIIQSYIINIQ 266
Query: 60 ATDRG 64
A D G
Sbjct: 267 AIDSG 271
>gi|432866007|ref|XP_004070658.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oryzias latipes]
Length = 3810
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSA+D D NA V+Y + SR F + SV+GEI + LD+ES Y V A
Sbjct: 1040 ILRVSATDRDKDSNAAVHYNIISGNSR-GQFSIDSVTGEIQVVAPLDYESEREYTLRVRA 1098
Query: 61 TDRGK 65
D G+
Sbjct: 1099 QDNGR 1103
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A+DPD G NA + Y + E + F M SGE+ DLD+E+R+ Y V AT
Sbjct: 1564 QITATDPDEGANAQIMYQIVEG-NIPEIFQMDIFSGELTSLIDLDYEARNEYVIVVQAT 1621
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD ES YE A
Sbjct: 1456 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRESVPFYELTAYA 1515
Query: 61 TDRGKETQ 68
DRG Q
Sbjct: 1516 VDRGVPPQ 1523
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G NA + Y L ++ F + +G I + +LD+E + +Y + A D
Sbjct: 1356 ISATDDDVGENARITYFLEDN---IPQFRIDPATGAITLQAELDYEDQMTYTLAITAKDN 1412
Query: 64 G 64
G
Sbjct: 1413 G 1413
>gi|432914323|ref|XP_004079055.1| PREDICTED: protocadherin-8-like [Oryzias latipes]
Length = 1006
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L ++A DPD G+N V Y G P F + +G + + +DFES+++YEF V
Sbjct: 258 LLDLNAEDPDEGLNGEVVYGFGHQVPPEIRQLFRVDRKTGRLTLESPVDFESKTTYEFDV 317
Query: 59 VATDRG 64
ATD G
Sbjct: 318 QATDLG 323
>gi|327270435|ref|XP_003219995.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
Length = 806
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G NA + Y+ P + N F + ++GEI + ++D+E +SY+ + AT
Sbjct: 259 KVEARDLDFGSNAQITYSFHRVPKKILNLFNLNEMTGEIIVLGEIDYEKETSYDMSIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DDG 321
>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 3841
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2831 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2890
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2891 VASDHGEKIQ 2900
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V+A D D G NA V Y++ G + N F + V G I A++LD +++ Y+ V
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSIESGTFGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMV 1640
Query: 59 VATDRG 64
ATD+G
Sbjct: 1641 KATDKG 1646
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVNIARPLDRELQHEHSLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3147 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3204
Query: 61 TDRG 64
D+G
Sbjct: 3205 VDQG 3208
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3045 IMQISATDADIRSNAEITYTLLGSGAE--KFKLNPDTGELKTSTPLDREEQAVYHLLVRA 3102
Query: 61 TDRG 64
TD G
Sbjct: 3103 TDGG 3106
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3252 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3310
Query: 61 TDRG 64
TD G
Sbjct: 3311 TDGG 3314
>gi|345309325|ref|XP_001515768.2| PREDICTED: protocadherin gamma-C5-like, partial [Ornithorhynchus
anatinus]
Length = 327
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ + F + +GEI + +DFE RS +E V
Sbjct: 261 LLRLNATDPDEGPNGRLDYSFGDHTAEAARGLFGLDPRTGEIRVLGPVDFEERSFHELHV 320
Query: 59 VATDRG 64
A DRG
Sbjct: 321 RARDRG 326
>gi|281345402|gb|EFB20986.1| hypothetical protein PANDA_000343 [Ailuropoda melanoleuca]
Length = 1180
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A D D G+N ++Y + +SP ++ + S +G++ + LD+E +S+EF V+A
Sbjct: 479 LITVKAHDADLGINGKISYRIQDSPV-SHLVAIDSDTGDVTAQRSLDYEQMASFEFRVIA 537
Query: 61 TDRGK 65
DRG+
Sbjct: 538 EDRGQ 542
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G N V + L + P + F + + +G + + Q LD+E +YE V
Sbjct: 263 LINLTATDPDQGPNGEVEFFLSKHVPPEVLDTFSIDAKTGRVILRQPLDYEKNPAYEVDV 322
Query: 59 VATDRG 64
A D G
Sbjct: 323 QARDLG 328
>gi|218505747|ref|NP_001136220.1| protocadherin-15 isoform SI-2 precursor [Mus musculus]
gi|85725325|gb|ABC79280.1| protocadherin-15-secreted isoform 2 [Mus musculus]
Length = 1171
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 793
>gi|390354059|ref|XP_001198628.2| PREDICTED: protocadherin Fat 1-like [Strongylocentrotus purpuratus]
Length = 1151
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y+ + +T+ F + + +G + + + LDF+ +SSY VVA
Sbjct: 225 IIQVEAHDSDSGTNGEVYYSFRQ---QTDQFAIHTTTGVVSLTRPLDFDQQSSYTLTVVA 281
Query: 61 TDRG 64
DRG
Sbjct: 282 KDRG 285
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A+D D G N + Y + + ++ HF M +GE+ + LD E++S+Y+ V
Sbjct: 802 VLTVNANDLDHGFNGKLLYAISDGNDKS-HFQMDFETGELKVLMPLDRETQSTYDVTVKI 860
Query: 61 TDRGK 65
+D GK
Sbjct: 861 SDMGK 865
>gi|348518842|ref|XP_003446940.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4724
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+ R+ ASDPD G+N V Y+L +S N F+ + V+G + + + LD ESR SY V
Sbjct: 3150 LTRLQASDPDEGLNRTVLYSLVDS---VNGFFSIDPVTGVVVLEKSLDRESRDSYRVRVQ 3206
Query: 60 ATDRGKE 66
ATDR +
Sbjct: 3207 ATDRAGQ 3213
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A D D VN + Y++ + R NHF++ V+G + + + LD E S Y V A D
Sbjct: 3363 RVVAEDLDSQVNGRITYSILKG-DRNNHFWIDPVAGLLKVNKKLDRELVSRYSLSVQAFD 3421
Query: 63 RG 64
G
Sbjct: 3422 SG 3423
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 17/79 (21%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG----------------ESP-SRTNHFYMKSVSGEICIA 43
+++V A DPD G N V Y+LG P S T+ F + S +G I
Sbjct: 2819 VVQVRALDPDWGSNGQVTYSLGPLLTYNLDLTRDAGSFSGPVSTTSVFAIDSKTGWITTV 2878
Query: 44 QDLDFESRSSYEFPVVATD 62
+D E+ SSY F VVA+D
Sbjct: 2879 SQMDHEACSSYSFEVVASD 2897
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G V Y+L + T F + +SG + I ++LDFE + + ++A DR
Sbjct: 935 VQAQDPDIGPGGQVRYSLINDFNGT--FEIGPISGVLRIRKELDFEKQQFFNLTLLAEDR 992
Query: 64 G 64
G
Sbjct: 993 G 993
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V+A D D G+N + YT+ E+ + F + + +G I IA++LD S Y V
Sbjct: 1561 VVQVTALDKDNGLNGQLTYTI-EAGNTGGVFGIDNTTGLIFIAKELDLTSLGFYTLSVRV 1619
Query: 61 TDRG 64
TD G
Sbjct: 1620 TDSG 1623
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNY-TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D NA+V+Y L + + T++F + S SG I A+ LD+E + F V
Sbjct: 2292 VLQVFAQDQDTEKNAVVSYQILSDIYNSTDYFSIDSNSGLIYTARLLDYELIQRHNFIVR 2351
Query: 60 ATDRG 64
ATD G
Sbjct: 2352 ATDSG 2356
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV A+ D G NA + Y + S + F + G I +A DLDFE Y + A
Sbjct: 3256 VVRVLATSADIGPNAEITYNI-RSGNELGKFTIDRKWGSISVADDLDFEVCKDYYLTIEA 3314
Query: 61 TDRG 64
D G
Sbjct: 3315 WDNG 3318
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G +A + Y+L FYM + +GE+ A +D E SY+ A
Sbjct: 3048 ILRVGATDADSGSSAEIQYSLFGI--GVEDFYMDANTGELRTAIVMDRELAPSYKLIAQA 3105
Query: 61 TDRG 64
TD G
Sbjct: 3106 TDGG 3109
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSS-YEFPVVATDR 63
SA D D G N V++T+ S ++ F + +GE+ I +DLDFES Y F V A+D
Sbjct: 473 SAVDDDKGENGYVSHTI--SGEQSLPFSIDQKTGEVRITRDLDFESSDDIYTFAVRASDW 530
Query: 64 G 64
G
Sbjct: 531 G 531
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFE-SRSSYEFPVV 59
+ RVSA+D D N V Y L E + +F + V+GE+ + + + + S + Y+ +V
Sbjct: 2089 VFRVSATDKDYSRNGQVTYGLKE---QHRNFQVHPVTGELTLKRAFEADLSNAEYKLILV 2145
Query: 60 ATDRG 64
ATD G
Sbjct: 2146 ATDGG 2150
>gi|218505745|ref|NP_001136219.1| protocadherin-15 isoform SI-1 precursor [Mus musculus]
gi|74226398|dbj|BAE23903.1| unnamed protein product [Mus musculus]
gi|85725323|gb|ABC79279.1| protocadherin-15-secreted isoform 1 [Mus musculus]
Length = 1176
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 743 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 798
>gi|26339142|dbj|BAC33242.1| unnamed protein product [Mus musculus]
Length = 998
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G N V + G+ SP N F + + +G+I + Q LD+E +YE V
Sbjct: 263 LINLTATDPDQGPNGEVEFFFGKHVSPEVMNTFGIDAKTGQIILRQALDYEKNPAYEVDV 322
Query: 59 VATDRG 64
A D G
Sbjct: 323 QARDLG 328
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV-SGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G N V+Y + +SP +H + +GE+ + LD+E + +EF V+
Sbjct: 479 LITLKAHDADLGSNGKVSYRIKDSP--VSHLVIIDFETGEVTAQRSLDYEQMAGFEFQVI 536
Query: 60 ATDRGK 65
A DRG+
Sbjct: 537 AEDRGQ 542
>gi|395504920|ref|XP_003756794.1| PREDICTED: protocadherin Fat 2 [Sarcophilus harrisii]
Length = 4252
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L R HF + GE+ IA+ LD+E SSY + A
Sbjct: 3237 ILTVSATDGDGPLNSAITYSLVAG-DRLGHFTIHPKKGELQIAKHLDWEETSSYFLTLRA 3295
Query: 61 TDRGK 65
TD G+
Sbjct: 3296 TDSGQ 3300
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D GVN V Y+L + + F + S +G I Q+LD E + +Y F V
Sbjct: 2713 VIQVTANDQDTGVNGEVTYSLAFEQGNAAAELFAINSENGWITTRQELDCEIQETYRFYV 2772
Query: 59 VATDRGKETQ 68
VA+D G+ Q
Sbjct: 2773 VASDHGRTIQ 2782
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y++ E S + F+ + +GE+ AQ+LD+E++ + V
Sbjct: 2187 VIKLLASDKDSGRNKDVSYSMVEDESEDSSFFQIDKSTGEMSTAQELDYETQQQFHVKVR 2246
Query: 60 ATDRG 64
A D G
Sbjct: 2247 AVDNG 2251
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A DPD G V YTL + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 943 LEAFDPDLGPGGEVKYTLMDDAQGT--FGLDPLTGALSLERELDFEKRTWYNLSLWASDG 1000
Query: 64 GK 65
GK
Sbjct: 1001 GK 1002
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D GVNA V Y+L P + F + +GE+ L+ E + Y A
Sbjct: 2927 ILQVTATDLDAGVNAQVTYSL-HGPG-ADEFKLDPYTGELTTLMPLNREEKDVYHLVAKA 2984
Query: 61 TDRG 64
TD G
Sbjct: 2985 TDGG 2988
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N + Y E +F++ G+I + + D+++ + Y V+A
Sbjct: 1985 LFQVSATDLDLGDNGTITYAFAED---YVYFWIDPYLGDISLKKPFDYQALNKYTLRVIA 2041
Query: 61 TDRG 64
D G
Sbjct: 2042 RDGG 2045
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD GVNA V+Y+L S +F +++ +G I + + L + E V A+D+
Sbjct: 3032 VFARDPDEGVNAQVSYSL--VGSADGYFSIEATTGVIRLEKPLRARQQEVLELTVRASDQ 3089
Query: 64 GKET 67
G T
Sbjct: 3090 GTPT 3093
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N V Y+L ++ + + F + G I +AQ LD + Y V A
Sbjct: 1470 LLQVRALDVDRGFNGQVQYSL-QAGNSESFFNIDPHLGIITVAQKLDLMPQDQYMLTVRA 1528
Query: 61 TDRG 64
D+G
Sbjct: 1529 EDQG 1532
>gi|262263291|tpg|DAA06591.1| TPA_inf: protocadherin beta 14 [Anolis carolinensis]
Length = 806
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G NA + Y+ P + N F + ++GEI + ++D+E +SY+ + AT
Sbjct: 259 KVEARDLDFGSNAQITYSFHRVPKKILNLFNLNEMTGEIIVLGEIDYEKETSYDMSIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DDG 321
>gi|157649902|gb|ABV59327.1| protocadherin epsilon9 [Callorhinchus milii]
Length = 801
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++A D D G+NA V YT S F M S SGEI + LDFE + YE V A
Sbjct: 257 KINAVDLDAGINAEVKYTFSSYSSERGREIFKMDSKSGEIKVDGLLDFEEANVYELYVQA 316
Query: 61 TDRG 64
TD+G
Sbjct: 317 TDKG 320
>gi|74228343|dbj|BAE24021.1| unnamed protein product [Mus musculus]
Length = 874
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF V
Sbjct: 264 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDV 323
Query: 59 VATDRG 64
A D G
Sbjct: 324 RARDGG 329
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 480 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 539
Query: 60 ATDRG 64
A DRG
Sbjct: 540 ARDRG 544
>gi|403255760|ref|XP_003920579.1| PREDICTED: protocadherin gamma-C5 [Saimiri boliviensis boliviensis]
Length = 879
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLHYSFGDHTSEAVRNLFGLDPSSGAIRVLGPIDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
>gi|90018166|gb|ABD83896.1| protocadherin 2 alpha b 10 [Ictalurus punctatus]
Length = 148
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L VSA D D GVN V+Y++ E S + F + SVSG+I + ++D+E + E +
Sbjct: 43 ILTVSAEDADEGVNGEVSYSIVSDEENSAIDLFSINSVSGDITVKANIDYEEHPAVELRI 102
Query: 59 VATDRG 64
A D+G
Sbjct: 103 QAQDKG 108
>gi|444525562|gb|ELV14088.1| Protocadherin gamma-C5 [Tupaia chinensis]
Length = 868
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE S YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPVDFEESSFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
SA DPD G N + YTL SPS +K++ E+ + Q LD E+++ ++ +
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPSSHFSLNVKTLKDGKLFPELVLEQQLDREAQARHQLVLT 213
Query: 60 ATDRG 64
A D G
Sbjct: 214 AVDGG 218
>gi|410973091|ref|XP_003992989.1| PREDICTED: protocadherin-16 [Felis catus]
Length = 3298
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV+A DPD G N V Y+L + T F + SG I A LD+E + VVA
Sbjct: 491 VVRVTARDPDQGTNGQVTYSLAPG-AHTRWFSIDPTSGIITTAASLDYELEPQPQLIVVA 549
Query: 61 TDRG 64
TD G
Sbjct: 550 TDGG 553
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A DPD G N V Y LG F ++ SGE+ A LD E SY F V A
Sbjct: 1873 LLQLQAHDPDAGANGRVTYYLGT--GAAGAFLLEPSSGELRTATVLDREQCPSYAFSVSA 1930
Query: 61 TD 62
D
Sbjct: 1931 VD 1932
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 3 RVSASDPDCGVNAMVNYTL--GESPSRTNHFYMK---SVSGEICIAQDLDFESRSSYEFP 57
R+S SDPD G A VN +L GE HF + SV +C+A+ LD E R +Y
Sbjct: 386 RISVSDPDDGDFAHVNVSLEGGE-----GHFALSTQDSVIYLVCVARQLDREERDAYNLR 440
Query: 58 VVATDRG 64
V ATD G
Sbjct: 441 VTATDSG 447
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L V A DPD G A V+Y L +F + S +G + + + LD E R+ + VVA+
Sbjct: 1564 LHVVARDPDLGEAARVSYRLAAG--GDGYFRLHSSTGALSVVRSLDREQRAEHVLTVVAS 1621
Query: 62 DRG 64
D G
Sbjct: 1622 DHG 1624
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+D D G N + Y+L + + F + +GE+ Q LD E +SSY+ V D
Sbjct: 1125 RVFATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEMTTLQTLDRERQSSYQLLVQVQD 1184
Query: 63 RGK 65
G
Sbjct: 1185 GGN 1187
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDF-ESRSSYEFP 57
L+V+A+D D G +++Y+LG S + F + + SG++C + LD + SS++F
Sbjct: 596 FLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAQSGDVCTTRILDRDQGPSSFDFT 655
Query: 58 VVATDRG 64
V A D G
Sbjct: 656 VTAVDGG 662
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN-HFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D G N V Y + S + F + + +G + + + LDFE R +E V
Sbjct: 273 VLQVYASDADAGANGAVTYEINRRQSEGDGPFSIDAHTGLLRLERPLDFEQRRVHELVVQ 332
Query: 60 ATDRGKETQ 68
A D G +
Sbjct: 333 ARDGGAHPE 341
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V ASD D G + +V +TL S + F + SG + +A LD E++S ++ V A
Sbjct: 2620 LLHVEASDADPGPHGLVRFTL-SSGDPSGLFELDESSGALRLAHPLDCETQSRHQLVVQA 2678
Query: 61 TD 62
D
Sbjct: 2679 AD 2680
>gi|363745800|ref|XP_003643422.1| PREDICTED: protocadherin gamma-A8-like, partial [Gallus gallus]
Length = 442
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G N V YT E S +N F+++ SG I + ++LDFE +E V
Sbjct: 262 LLTVTASDPDDGTNGDVLYTFPEISDKASNIFHLEPDSGAIRLLKNLDFEEAEFHELKVR 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDGG 326
>gi|332025272|gb|EGI65444.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 1179
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+DPD G V Y L ++ F + VSG + Q LDFE R + +VA DR
Sbjct: 1037 VDATDPDEGAGGDVEYFLSDAMESEGFFKVDKVSGTVRTTQSLDFEERQVHTLTIVARDR 1096
Query: 64 GK 65
G+
Sbjct: 1097 GE 1098
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A D D G N + Y+ E T+ F + VSG I + + L + R+ +E V+A
Sbjct: 234 ILRVIAEDADLGRNGEIYYSFAEE---TDQFAVHPVSGVITLTRPLRYAERAIHELVVLA 290
Query: 61 TDRG 64
DRG
Sbjct: 291 KDRG 294
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R +A+D D G NA V Y+L + TN F + V+G + + LD E + YE + A
Sbjct: 929 VWRANATDADLGDNARVTYSL---VTETNDFRVDPVTGVLSVFGKLDRERQEIYELRIRA 985
Query: 61 TDRGKET 67
D +T
Sbjct: 986 RDNSNDT 992
>gi|338713192|ref|XP_001504036.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C4 [Equus
caballus]
Length = 871
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|58865998|ref|NP_001012215.1| protocadherin gamma-B7 precursor [Rattus norvegicus]
gi|56269452|gb|AAH87084.1| Protocadherin gamma subfamily B, 7 [Rattus norvegicus]
gi|149017342|gb|EDL76393.1| rCG49295, isoform CRA_ac [Rattus norvegicus]
Length = 931
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LR+ A+D D G+NA Y+ LG + + F + V+G+I Q LDFE Y V
Sbjct: 261 VLRLRATDQDEGINAEFTYSFLGVANKAQHEFSLDPVTGDIITLQSLDFEEVEQYTIDVE 320
Query: 60 ATDRG 64
A DRG
Sbjct: 321 AKDRG 325
>gi|348582944|ref|XP_003477236.1| PREDICTED: protocadherin gamma-C4-like [Cavia porcellus]
Length = 869
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRG 64
A DRG
Sbjct: 537 ARDRG 541
>gi|149017343|gb|EDL76394.1| rCG49295, isoform CRA_ad [Rattus norvegicus]
Length = 869
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LR+ A+D D G+NA Y+ LG + + F + V+G+I Q LDFE Y V
Sbjct: 261 VLRLRATDQDEGINAEFTYSFLGVANKAQHEFSLDPVTGDIITLQSLDFEEVEQYTIDVE 320
Query: 60 ATDRG 64
A DRG
Sbjct: 321 AKDRG 325
>gi|410956059|ref|XP_003984662.1| PREDICTED: protocadherin Fat 1 [Felis catus]
Length = 4586
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 944 IMWLEAHDPDLGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQHLDFEKKQVYNLT 998
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 999 VRAKDKGK 1006
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++ ASD D G N V Y+L +S S F + +G I ++LD E R Y+ V
Sbjct: 2826 VIQARASDLDSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDHYQIKV 2885
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2886 VASDHGEKVQ 2895
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 166 IARVSATDADIGTNGEFYYSFKD---RTDVFAIHPTSGAIVLTGRLDYAETKLYEMEILA 222
Query: 61 TDRG 64
DRG
Sbjct: 223 VDRG 226
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD S+ Y+ V A
Sbjct: 1579 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFTIDPILGLIKTAKELDRNSQVEYDLMVKA 1637
Query: 61 TDRG 64
TD+G
Sbjct: 1638 TDKG 1641
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L S F + SG + + + LD E R+ Y + A
Sbjct: 3142 LTRVQATDADAGLNRKISYSLVNSAD--GQFSINEFSGILQLEKPLDREVRAVYTLTLKA 3199
Query: 61 TDRG 64
D+G
Sbjct: 3200 VDQG 3203
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS +F + S +G I LD+E S++ F V
Sbjct: 1790 LVIRATDADKESNALLVYHIVE-PSIHKYFAIDSSTGAIHTVLSLDYEETSTFHFTVQVH 1848
Query: 62 DRG 64
D G
Sbjct: 1849 DMG 1851
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y + S + F + S +G I I ++LD+ES Y V A
Sbjct: 3247 VLQVYAASRDIEANAEITYAI-ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEA 3305
Query: 61 TDRG 64
TD G
Sbjct: 3306 TDGG 3309
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + I LD E + + + A
Sbjct: 839 IIQVEATDKDLGPNGHVTYSI---LTDTDKFSIDSVTGVVKIVSPLDREVQHVHYLKIEA 895
Query: 61 TDRGKE 66
D+ +E
Sbjct: 896 RDQARE 901
>gi|344287782|ref|XP_003415631.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Loxodonta
africana]
Length = 4556
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S F + +SG I + Q LD E +SSY V A
Sbjct: 3149 LTRVQAVDPDVGINRKVVYSLADSAD--GFFSIDGLSGIIILEQPLDRELQSSYSISVQA 3206
Query: 61 TDR 63
TD+
Sbjct: 3207 TDQ 3209
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y++ + T F + S +G + +A LD ES+S+Y + A
Sbjct: 849 IIQVEARDKDLGSNGEVTYSV---LTDTQQFGINSSTGIVYVADQLDRESQSNYSLKIEA 905
Query: 61 TDRGKETQ 68
D+ + Q
Sbjct: 906 RDKSESGQ 913
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ SY V A
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVITTADILDRETMGSYWLTVYA 1119
Query: 61 TDRG 64
TDRG
Sbjct: 1120 TDRG 1123
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+ +V A D D G N V Y+L P + F + + +G I +DLD E+ ++ F
Sbjct: 2832 LTQVRALDMDWGANGQVTYSLQSDSQPEKVMEAFNIDTNTGWISTLKDLDHETDPTFTFS 2891
Query: 58 VVATDRGK 65
VVA+D G+
Sbjct: 2892 VVASDLGE 2899
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+G+
Sbjct: 961 DPDLGLGGQVRYSLVND--YNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGR 1016
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA + YT+ E+ + N F ++ V G I ++++ D + S + V
Sbjct: 1584 VLQVTALDKDKGENAELIYTI-EAGNTGNTFKIEPVLGIITVSKEPDLTTMSQFVLSVKV 1642
Query: 61 TDRG 64
TD+G
Sbjct: 1643 TDQG 1646
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNY---TLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y +L P N F +G I ++LDFES +Y F
Sbjct: 490 VLTVSASDKDKGENGYITYSIASLNLLPFAINQF-----TGVISTTEELDFESSPETYRF 544
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 545 IVRASDWG 552
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N + Y+L S N F++ SGE+ LD E Y A
Sbjct: 3047 ILKVSAKDADIGSNGDIRYSL--YGSGNNEFFLDPESGELKTLALLDRERVPVYSLIARA 3104
Query: 61 TDRG 64
TD G
Sbjct: 3105 TDGG 3108
>gi|426350305|ref|XP_004042719.1| PREDICTED: protocadherin beta-6 [Gorilla gorilla gorilla]
Length = 842
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G+NA V Y+L PS+ H + S+ +G + + LD+E+ ++EF
Sbjct: 519 VSATDRDSGINAQVTYSL--LPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFR 576
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 577 VGATDRG 583
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G V+Y L + F + +++GEI + + LDFE SY+ V A
Sbjct: 308 VITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFEEIQSYDVDVEA 367
Query: 61 TDRG 64
TD G
Sbjct: 368 TDGG 371
>gi|354492219|ref|XP_003508247.1| PREDICTED: protocadherin gamma-A9-like [Cricetulus griseus]
Length = 846
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V ASDPD G N V Y + + ++ F+++ +GEI +A++LD+E S YE +
Sbjct: 261 LLTVRASDPDKGANGKVTYKFRKVNEKQSLLFHLQENTGEISVAKNLDYEECSLYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDGG 325
>gi|41223270|emb|CAD92434.1| protocadherin [Homo sapiens]
Length = 787
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 305 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 362
Query: 61 TDRG 64
D G
Sbjct: 363 KDNG 366
>gi|158297319|ref|XP_555589.3| AGAP007909-PA [Anopheles gambiae str. PEST]
gi|157015138|gb|EAL39705.3| AGAP007909-PA [Anopheles gambiae str. PEST]
Length = 361
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D G N V Y + S + F + +G I + + LDFE+R +E VV
Sbjct: 149 VLQVYATDQDAGENGQVEYAINRRQSDKEQMFRIDPATGLISVNKPLDFETRELHELVVV 208
Query: 60 ATDRGKE 66
A DRG +
Sbjct: 209 AKDRGMQ 215
>gi|410913705|ref|XP_003970329.1| PREDICTED: protocadherin gamma-A11-like [Takifugu rubripes]
Length = 783
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH---FYMKSVSGEICIAQDLDFESRSSYEFP 57
+L V+A DPD G+N+ + Y+L S R H F + S +G++ + LD+E + YE
Sbjct: 257 LLAVNAVDPDEGMNSEIEYSL-RSKMRGIHSEPFDLNSKTGKLTVKAGLDYEEKQVYEIK 315
Query: 58 VVATDRG 64
V+A D+G
Sbjct: 316 VLAADKG 322
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ V A+D D G NA V+Y+L + S T+ + +G I + DFE+ +++F V
Sbjct: 471 VFSVIAADADSGQNAAVSYSLIRNQELSITSFLNINEANGTISALKSFDFETLKTFQFQV 530
Query: 59 VA 60
VA
Sbjct: 531 VA 532
>gi|449269582|gb|EMC80343.1| Protocadherin Fat 3 [Columba livia]
Length = 4549
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+DPD GVN V YTL +S +F + SG I + LD E +SSY V A
Sbjct: 3151 LTRVQATDPDVGVNRKVTYTLADSAD--GYFSVDRSSGIIILEHPLDRELQSSYNISVKA 3208
Query: 61 TDR 63
+D+
Sbjct: 3209 SDQ 3211
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG---ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+++V A D D N V YTL E T F + S SG I +DLD E ++ F
Sbjct: 2834 LMQVKAVDADSSANGQVTYTLAVESELEKITEAFTIDSNSGWISTLKDLDHEKDPAFTFA 2893
Query: 58 VVATDRGK 65
VVA+D G+
Sbjct: 2894 VVASDLGE 2901
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y++ + T F + S +G + +A LD ES+++Y + A
Sbjct: 851 IIQVEARDKDLGSNGEVTYSV---LTDTQQFAINSSTGMVYVADQLDRESKANYTLKIEA 907
Query: 61 TDRGK 65
D+ +
Sbjct: 908 RDKAE 912
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
DPD G+ V Y+L F + SG I + ++LD+E + Y V A D+G+
Sbjct: 963 DPDLGLGGQVRYSLVND--YNGRFEIDKASGAIRLNKELDYEKQQFYNLTVRAKDKGR 1018
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEFPVV 59
+L VSA D D G N + Y++ S F + +G I +++LDFES SY F V
Sbjct: 492 VLAVSAVDKDRGENGYITYSVASLNSLP--FTINQFTGVISTSEELDFESSPESYRFIVR 549
Query: 60 ATDRG 64
A+D G
Sbjct: 550 ASDWG 554
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA D D G N + Y+L + N F++ +GE+ LD E Y A
Sbjct: 3049 ILKISAKDADIGSNGEIRYSL--FGAGNNKFFLDPENGELKSLAPLDREKIPVYNLVARA 3106
Query: 61 TDRG 64
TD G
Sbjct: 3107 TDGG 3110
>gi|332019420|gb|EGI59904.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 3467
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV++ D D G+N V Y + ++ T+ F++ G I + + LD ES S+ F V+
Sbjct: 1086 VLRVNSRDNDTGINQQVRYAIQNDTEDSTDLFHIDPDEGVIFLKRSLDHESHESHHFTVI 1145
Query: 60 ATDRG 64
A DRG
Sbjct: 1146 AMDRG 1150
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G N V Y+ G N F + + +G I LD E + Y+F VV
Sbjct: 1605 ILKVIAHDKDLGSNGEVRYSFGSDIGELANVFTVDAYTGWISTLVQLDKEKQPEYKFQVV 1664
Query: 60 ATDRG 64
ATD G
Sbjct: 1665 ATDNG 1669
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+D D G+N + Y +S HF + + SG + +A+ LD E+++ Y + A D
Sbjct: 1919 KVHATDDDIGINRKIRYEFIDSAD--GHFLIAADSGIVTLAKSLDRETKAMYNVTIQALD 1976
Query: 63 RG 64
+G
Sbjct: 1977 QG 1978
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A D D +NA++NY + E R +F++ S +G I LD E+ + F V +
Sbjct: 572 LVIKAEDADSELNALLNYDIVEDLPR-KYFHIDSSTGAIRTVMLLDHETIPMFSFHVKVS 630
Query: 62 DRGK 65
D GK
Sbjct: 631 DLGK 634
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A D D G V Y + S F + ++GEI + LD E + YE PV+ATD
Sbjct: 1297 VLAVDEDFGEYGTVTYAI-MSEMMKEIFEINKLTGEIVTRKKLDREEQKRYEIPVMATDG 1355
Query: 64 G 64
G
Sbjct: 1356 G 1356
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++ D D VN + + + SR+ F ++S +GE+ +A+ LD E+ YE +V
Sbjct: 1712 VVKLITVDKDTDVNTPIEFYITSGDSRS-QFQIRS-TGEVYVAKSLDRETIDRYELQIVG 1769
Query: 61 TD 62
TD
Sbjct: 1770 TD 1771
>gi|149048782|gb|EDM01323.1| similar to FAT tumor suppressor homolog 4 (predicted) [Rattus
norvegicus]
Length = 1155
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
TDRG
Sbjct: 326 TDRG 329
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDMGPNGTVKYSI--SAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ S F + VSG + LD E ++ Y ++A
Sbjct: 602 LLVLGATDGDLGDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLILA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN V Y+L ++P N F + +G I + LD + SY+ +VA
Sbjct: 912 IFQAKAVDPDEGVNGRVLYSLKQNPK--NLFTINEQNGNISLLGTLDVHA-GSYQVEIVA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
>gi|149017281|gb|EDL76332.1| rCG49503 [Rattus norvegicus]
Length = 794
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D G N+ ++Y+ SP + F + + +GEI I +LDFE Y+ V
Sbjct: 261 VIRLNASDRDEGTNSAISYSFNRLVSPRILDQFSIDADTGEIVIQGNLDFEQVDVYKIHV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|47216287|emb|CAF96583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3280
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSA DPD G N V Y+L E S+ F + S++G I LD ESR+ Y VA
Sbjct: 1885 VLRVSAFDPDEGPNGRVTYSLTEDSSQ-GAFSVDSLTGVIRTTGPLDRESRAQYTLRAVA 1943
Query: 61 TD 62
TD
Sbjct: 1944 TD 1945
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA DPD G N++V + + S+ H+ + SG + + Q LD+E Y V A
Sbjct: 2621 LVQVSARDPDLGANSLVRFDIISGNSK-GHYKLDPESGLLAVNQSLDYEQDPKYILTVRA 2679
Query: 61 TDRGK 65
+D G+
Sbjct: 2680 SDGGE 2684
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A+D D G N + Y + S + F + SG + + + LD+E+++ +E V AT
Sbjct: 252 QVHATDLDLGDNGRITYEINRRQSDPDRVFSINRTSGVVYVNKPLDYEAQAFHELIVSAT 311
Query: 62 DRGKETQ 68
D G + +
Sbjct: 312 DNGAQPE 318
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++ ASD D G+N + Y++ S F + SV G + + LD E SY+ + A
Sbjct: 2195 VMQMFASDADSGINGQIEYSI-VSGDPNEAFILDSVRGILATSIPLDREITPSYKLVLQA 2253
Query: 61 TDRG 64
D+G
Sbjct: 2254 ADQG 2257
>gi|344257356|gb|EGW13460.1| Protocadherin gamma-C4 [Cricetulus griseus]
Length = 605
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF V
Sbjct: 3 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDV 62
Query: 59 VATDRG 64
A D G
Sbjct: 63 RARDGG 68
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 219 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 278
Query: 60 ATDRG 64
A DRG
Sbjct: 279 ARDRG 283
>gi|41223268|emb|CAD92433.1| protocadherin [Homo sapiens]
Length = 762
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 305 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 362
Query: 61 TDRG 64
D G
Sbjct: 363 KDNG 366
>gi|395817817|ref|XP_003782344.1| PREDICTED: uncharacterized protein LOC100956225 [Otolemur garnettii]
Length = 1897
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G+N ++Y+ +S +R F + +V+GEI + + LDFE SY V
Sbjct: 1555 VIKVSARDLDAGINGELSYSFFQSSNRVIQAFEINTVTGEIRLKKVLDFEEIQSYRMEVE 1614
Query: 60 ATDRG 64
A+D G
Sbjct: 1615 ASDGG 1619
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G V Y L + T F + ++GEI + + LDFE+ Y +VA
Sbjct: 261 VLAVSARDLDAGAYGNVAYALFQGDEVTQPFVIDEITGEIRLKRALDFETTRYYNVEIVA 320
Query: 61 TDRG 64
D G
Sbjct: 321 IDGG 324
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 472 ISATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINADNGHLFALRALDYEALQAFEFR 529
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 530 VGATDRG 536
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D G V+Y L + F + +++GEI + + LDFE SY + ATD
Sbjct: 1005 VSARDLDAGSFGEVSYALFQVDDVNQPFEINTITGEIRLRKALDFEEFQSYHLDIEATDG 1064
Query: 64 GKET 67
G T
Sbjct: 1065 GGLT 1068
>gi|395541765|ref|XP_003772809.1| PREDICTED: protocadherin Fat 4 [Sarcophilus harrisii]
Length = 5148
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASDPD G N V Y++ S T+ F + S +G I LD E +++Y+ VVATD
Sbjct: 877 VSASDPDSGPNGTVKYSI--SAGDTSRFQIHSHTGVISTKMVLDREEKTAYQLQVVATDG 934
Query: 64 G 64
G
Sbjct: 935 G 935
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D G NA + Y L E F+M +G I + + LD+E+R Y + A
Sbjct: 437 VLQVSAADADEGTNADIRYQLQED---GGPFHMDPETGLITVREPLDYEARRQYSLTLQA 493
Query: 61 TDRG 64
DRG
Sbjct: 494 HDRG 497
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S +G++ +A LD E+ +SY + A
Sbjct: 1395 VLRVSASDVDEGSNGLIHYSVVKG-NEEKMFAIDSATGQVILAGQLDHEATASYSLLIQA 1453
Query: 61 TDRG 64
D G
Sbjct: 1454 VDSG 1457
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD G+N MV Y+L ++P N F + +G I + + LD + SY+ ++A
Sbjct: 1078 IFQAKALDPDEGINGMVLYSLKQNPK--NLFTIDEKNGNISLLRPLDVHA-GSYQVEILA 1134
Query: 61 TDRG 64
+DRG
Sbjct: 1135 SDRG 1138
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+D D G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2235 VFKAQATDRDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2292
Query: 61 TDRGK 65
TD+G+
Sbjct: 2293 TDKGQ 2297
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N + Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1605 VISVTARDPDADINGQLTYAIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLFELTVKA 1664
Query: 61 TDRG 64
+D+
Sbjct: 1665 SDQA 1668
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y+L S + F + SV+G + +A+ LD E ++ Y V +
Sbjct: 2339 IVQVYAADGDEGTNGQVRYSL-LSGNENQEFRIDSVTGILSVAKPLDREKKAMYSLTVQS 2397
Query: 61 TDRG 64
DRG
Sbjct: 2398 ADRG 2401
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + ASD D G N V ++ E+ + F + VSG + LD E ++ Y V+A
Sbjct: 768 LLVIEASDGDLGDNGTVRFSFQEADTEQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 827
Query: 61 TDRGKETQ 68
D G Q
Sbjct: 828 VDLGSPPQ 835
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++ Y+ + A
Sbjct: 1503 VTATDSDSGDNADIHYSITGT---NNHGTFSISPNTGGIFLAKKLDFETQPLYKLNITAK 1559
Query: 62 DRGK 65
D+G+
Sbjct: 1560 DQGR 1563
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSASD D NA+++Y L S+ F + +G+I + LD E++ +Y VV+
Sbjct: 2549 VLLVSASDADASTNAVISYRLIGGNSQ---FTINPSTGQIITSALLDRETKENYTLIVVS 2605
Query: 61 TDRG 64
+D G
Sbjct: 2606 SDGG 2609
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + YT+ E F++ V+G + + LD+E+R Y A D
Sbjct: 2029 ILATDDDSGVNGEITYTVNED-DEDGIFFLNPVTGVFNLTRSLDYETRQYYILTARAEDG 2087
Query: 64 GKE 66
G +
Sbjct: 2088 GGQ 2090
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R++A+D D G NA++ Y+L S S + F + SG I LD+E++ SY V A
Sbjct: 3381 VMRLNATDADSGSNAVIAYSLQSSDS--DLFVIDPNSGVITTQGFLDYETKQSYHLTVKA 3438
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y + S + F + + +G + +A+ LD+E +E + ATD
Sbjct: 3279 VSARDRDAAMNGLITYHI-SSGNENGLFAINASTGTLTLAKPLDYELHQKHEMTISATDG 3337
Query: 64 G 64
G
Sbjct: 3338 G 3338
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + Y++ E T + + G++ + +LD E + Y VVA
Sbjct: 1181 FFKVQASDQDSGANGEIAYSIAEG--NTGNAFGIFPDGQLYVKSELDRELQDRYVLLVVA 1238
Query: 61 TDRGKE 66
+DR E
Sbjct: 1239 SDRAVE 1244
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V Y + + F++ SGE+ + LD E RS Y V A
Sbjct: 1925 IMQLTAMDADEGANALVTYAIISGAD--DSFHIDPESGELIATKRLDRERRSKYSLLVRA 1982
Query: 61 TD 62
D
Sbjct: 1983 DD 1984
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ + YTL ++ ++ S SGE+ + Q LD E++ + A
Sbjct: 2445 ILQVVARDDDQGSNSKLTYTL--IGGNEDNAFILSASGELKVRQKLDRETKEKCILLITA 2502
Query: 61 TDRG 64
TD G
Sbjct: 2503 TDSG 2506
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D GVNA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2961 RVTTSDEDIGVNAVSRYSITDT---SLPFTINPSTGDIIISRPLNREDTDRYRIRVSAHD 3017
Query: 63 RG 64
G
Sbjct: 3018 SG 3019
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N + Y + + N F + +GEI + LD E S Y V
Sbjct: 2855 ILTVSAIDKDSGPNGQLEYNIVNGNTE-NSFSIHHSTGEIRSIRSLDREKVSQYVLTVRC 2913
Query: 61 TDRGKETQ 68
+D+G Q
Sbjct: 2914 SDKGTPPQ 2921
>gi|54019436|ref|NP_955800.1| protocadherin alpha-6 [Rattus norvegicus]
gi|40645528|dbj|BAD06371.1| cadherin-related neuronal receptor 6 [Rattus norvegicus]
Length = 963
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D G N+ ++Y+ SP + F + + +GEI I +LDFE Y+ V
Sbjct: 278 VIRLNASDRDEGTNSAISYSFNRLVSPRILDQFSIDADTGEIVIQGNLDFEQVDVYKIHV 337
Query: 59 VATDRG 64
ATD+G
Sbjct: 338 DATDKG 343
>gi|449475308|ref|XP_004175477.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A3-like
[Taeniopygia guttata]
Length = 821
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L +SASD D G NA + Y G+ P++ F + + G I + ++LDFE Y V
Sbjct: 270 VLNISASDADAGTNAHITYGFGKMPTKVLQKFTVDAQRGTITLQEELDFEDTRGYTLLVE 329
Query: 60 ATDRG 64
A D G
Sbjct: 330 ARDGG 334
>gi|426231067|ref|XP_004009565.1| PREDICTED: protocadherin gamma-A11 [Ovis aries]
Length = 824
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G+N V Y+ S+ + F + S+SG++ I LDFE YE +
Sbjct: 261 VLTVNATDPDEGINGQVVYSFRNVESKASKIFQLNSLSGDVLIEGSLDFEKYRLYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AQDGG 325
>gi|41281624|ref|NP_446394.1| protocadherin alpha-8 precursor [Rattus norvegicus]
gi|40645532|dbj|BAD06373.1| cadherin-related neuronal receptor 8 [Rattus norvegicus]
gi|50512338|gb|AAT77564.1| protocadherin alpha 8 [Rattus norvegicus]
Length = 949
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D G N+ ++Y+ SP + F + + +GEI I +LDFE Y+ V
Sbjct: 261 VIRLNASDRDEGTNSAISYSFNRLVSPRILDQFSIDADTGEIVIQGNLDFEQVDVYKIRV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|348514704|ref|XP_003444880.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oreochromis niloticus]
Length = 3519
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSA+D D NA+V+Y + SR F + SV+GEI + LD+E+ Y V A
Sbjct: 729 ILRVSATDRDKDSNAVVHYNIISGNSR-GQFSIDSVTGEIQVVAPLDYEAEREYTLRVRA 787
Query: 61 TDRGK 65
D G+
Sbjct: 788 QDNGR 792
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A+DPD G NA + Y + E + F M SGE+ DLD+E+R+ Y V AT
Sbjct: 1253 QITATDPDEGANAQIMYQIVEG-NIPEIFQMDIFSGELTSLIDLDYETRNEYVIVVQAT 1310
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G NA + Y L ++ F + +G I + +LD+E + +Y + A D
Sbjct: 1045 ISATDDDVGENARITYFLEDN---IPQFRIDPATGAITLQAELDYEDQMTYTLAITAKDN 1101
Query: 64 G 64
G
Sbjct: 1102 G 1102
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + ++ LD E+ YE A
Sbjct: 1145 ILQISATDRDAHANGRVQYTFQNGEDGGGDFTIEPKSGIVRNSRRLDRENVPFYELTAYA 1204
Query: 61 TDRGKETQ 68
DRG +Q
Sbjct: 1205 VDRGVPSQ 1212
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+SASDPD G ++YT+ + +++F++ +G I Q LD E + F V AT
Sbjct: 514 MSASDPDGGDAGRLSYTMAPLMNSRSSDYFHIHPDTGLITSTQILDREHMDLHYFRVTAT 573
Query: 62 DRG 64
D G
Sbjct: 574 DHG 576
>gi|345791459|ref|XP_003433494.1| PREDICTED: protocadherin-15 isoform 2 [Canis lupus familiaris]
Length = 1797
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R SY+ VVATD
Sbjct: 750 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDSYQLVVVATD 805
>gi|345791455|ref|XP_851607.2| PREDICTED: protocadherin-15 isoform 3 [Canis lupus familiaris]
Length = 1678
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R SY+ VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDSYQLVVVATD 793
>gi|327265474|ref|XP_003217533.1| PREDICTED: protocadherin Fat 2-like, partial [Anolis carolinensis]
Length = 2916
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V+A+D D G + V Y+L P F + S SG I ++LD E + +Y+F VV
Sbjct: 1384 VIQVTANDQDTGSDGQVTYSLRSEPDNIRKLFTIDSESGWITTLKELDCEVQETYKFFVV 1443
Query: 60 ATDRGKETQ 68
A+D G++ Q
Sbjct: 1444 ASDHGRKIQ 1452
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D +N + Y++ + + +HF + +GEI IA+ LD E SSY V A
Sbjct: 1909 VLTVLADDKDGVMNNQITYSI-VAGNPLSHFIIDPQTGEIRIAKYLDREEISSYSLKVQA 1967
Query: 61 TDRGKE 66
TD G+E
Sbjct: 1968 TDNGQE 1973
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ A+D D G N +++Y + E S + F+ + S +GEI Q +D+E+ + V
Sbjct: 857 IIQLFANDRDSGRNRLISYQILEERSNASKFFTIDSSTGEITTTQVIDYEANQEFYIKVR 916
Query: 60 ATDRG 64
A D G
Sbjct: 917 AMDHG 921
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N ++ Y+ E +F++ G+I + + LDF++ + Y V A
Sbjct: 655 IFQVSATDKDSGNNGVIFYSFVED---YKYFWIDPYLGDISLKKPLDFQALNKYILRVTA 711
Query: 61 TDRGK 65
D G+
Sbjct: 712 RDAGE 716
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D G N + YTL P + F + +GE+ LD E + Y+ V A
Sbjct: 1597 VLKVSATDADVGSNGQIIYTL-HGPGAED-FRLDPHTGELNTFALLDRELKPQYQLVVKA 1654
Query: 61 TDRG 64
TD G
Sbjct: 1655 TDGG 1658
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A D D G NA V Y+L ES S HF ++ +G I + + L S+ E V ATD+
Sbjct: 1702 VIARDADEGHNAEVVYSLAESAS--GHFSIEETTGVIHLEKPLMELQTSALELTVCATDK 1759
Query: 64 G 64
G
Sbjct: 1760 G 1760
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D GVNA ++Y L E+ + + F + SG I ++Q L + + V A
Sbjct: 140 VVQVRALDQDQGVNAEIHYNL-EAGNNGDFFTINMFSGIITVSQKLHHSKQERFTLTVKA 198
Query: 61 TDRG 64
D+G
Sbjct: 199 EDQG 202
>gi|339235513|ref|XP_003379311.1| putative cadherin EGF LAG seven-pass G-type receptor 3 [Trichinella
spiralis]
gi|316978069|gb|EFV61093.1| putative cadherin EGF LAG seven-pass G-type receptor 3 [Trichinella
spiralis]
Length = 1072
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L ++A+D D G+N+ + Y + + F + SG + +A+ LD E R+ YE V+A
Sbjct: 780 LLHLTATDSDYGINSRITYHFSDEDPENDAFQIDPSSGVVRVARPLDRERRAVYEITVLA 839
Query: 61 TDRGK 65
D+G+
Sbjct: 840 KDKGE 844
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 4 VSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A DPD G NA + Y L G P F ++ +G + + LD ES+S ++ V+ATD
Sbjct: 680 VRAIDPDDGENARLQYQLEGGEPV----FAIEPSTGVLFVNGTLDRESQSRFKLKVIATD 735
Query: 63 RGK 65
G+
Sbjct: 736 HGQ 738
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR++A D D G N+ + + + + SV+G + +A+ LD E + E V A
Sbjct: 467 LLRLAAYDLDSGHNSEIRFRFTGPEANNCPLELDSVTGWVTVAKPLDHELEPTIELQVEA 526
Query: 61 TDRGK 65
D G
Sbjct: 527 VDLGN 531
>gi|156311353|ref|XP_001617773.1| hypothetical protein NEMVEDRAFT_v1g48709 [Nematostella vectensis]
gi|156195716|gb|EDO25673.1| predicted protein [Nematostella vectensis]
Length = 347
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G NA + Y++ SP + F M V+GEI + Q LD E Y V ATD
Sbjct: 75 VSASDADIGENARLTYSI-VSPEKAT-FSMNPVTGEITVGQRLDREGVEHYLLNVTATDN 132
Query: 64 GK 65
G+
Sbjct: 133 GR 134
>gi|355749714|gb|EHH54113.1| hypothetical protein EGM_14874 [Macaca fascicularis]
Length = 4591
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N+ V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2831 VIQIRASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKV 2890
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2891 VASDHGEKIQ 2900
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLMDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 VDRG 228
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3045 IMQISAADADIRSNAEITYTLLGSGAEK--FQLNPDTGELKTSAPLDREEQAVYHLLVRA 3102
Query: 61 TDRG 64
TDRG
Sbjct: 3103 TDRG 3106
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V+A D D G NA V Y++ G + N F + V G I A++LD ++ Y+ V
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSIESGIFGNIGNSFMIDPVLGSIKTAKELDRSNQVEYDLIV 1640
Query: 59 VATDRG 64
ATD+G
Sbjct: 1641 KATDKG 1646
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3147 LTRVQATDADSGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3204
Query: 61 TDRG 64
D+G
Sbjct: 3205 VDQG 3208
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS +F + S +G I LD+E S++ F V
Sbjct: 1795 LVIRAADADKDSNALLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDYEETSTFHFTVQVH 1853
Query: 62 DRG 64
D G
Sbjct: 1854 DMG 1856
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y + A
Sbjct: 3252 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEA 3310
Query: 61 TDRG 64
TD G
Sbjct: 3311 TDGG 3314
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D N ++Y L + S++ +HF++ S +G I + + LD+E + V
Sbjct: 2305 VVQVRATDADSEPNRGISYQLSGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRHTIFVR 2364
Query: 60 ATDRG 64
A D G
Sbjct: 2365 AVDGG 2369
>gi|327270447|ref|XP_003220001.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
Length = 807
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV A D D G NA + Y+ P + N F++ ++GEI ++D+E ++YE + AT
Sbjct: 259 RVEARDLDFGSNAQITYSFHRIPEKLYNLFHLNEMTGEITTFGEVDYEKETNYEMTIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|119514185|gb|ABL75848.1| protocadherin 2A8 [Takifugu rubripes]
Length = 931
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH---FYMKSVSGEICIAQDLDFESRSSYEFP 57
+L V+A DPD G+N+ + Y+L S R H F + S +G++ + LD+E + YE
Sbjct: 257 LLAVNAVDPDEGMNSEIEYSL-RSKMRGIHSEPFDLNSKTGKLTVKAGLDYEEKQVYEIK 315
Query: 58 VVATDRG 64
V+A D+G
Sbjct: 316 VLAADKG 322
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ V A+D D G NA V+Y+L + S T+ + +G I + DFE+ +++F V
Sbjct: 471 VFSVIAADADSGQNAAVSYSLIRNQELSITSFLNINEANGTISALKSFDFETLKTFQFQV 530
Query: 59 VA 60
VA
Sbjct: 531 VA 532
>gi|345791457|ref|XP_003433493.1| PREDICTED: protocadherin-15 isoform 1 [Canis lupus familiaris]
Length = 1683
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R SY+ VVATD
Sbjct: 743 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDSYQLVVVATD 798
>gi|344265567|ref|XP_003404855.1| PREDICTED: protocadherin alpha-13-like [Loxodonta africana]
Length = 805
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+DPD G N + Y+ SP+ F + +GEI +LDFE + YE PV
Sbjct: 261 VIKLNATDPDDGANGDIVYSFRRPVSPAVEYAFIISPSNGEIRTKGNLDFEEKKLYEIPV 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 EAVDKG 326
>gi|256078635|ref|XP_002575600.1| cadherin [Schistosoma mansoni]
gi|360045167|emb|CCD82715.1| putative cadherin [Schistosoma mansoni]
Length = 1203
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVNA++ Y+L +P T F + ++G++ Q LD E+RS Y V+A D
Sbjct: 537 IHATDLDVGVNALITYSL-VNPYDTAFFRIDPITGKLWTIQSLDCENRSEYHLVVIARDS 595
Query: 64 G 64
G
Sbjct: 596 G 596
>gi|14039469|gb|AAK53234.1|AF326309_1 protocadherin-betaP [Mus musculus]
Length = 216
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ VSA+D D GVN ++Y+L + S + F + ++GE+ + + LDFE SYE +
Sbjct: 21 IITVSATDKDIGVNGQISYSLFQVSDDISKTFSIHPLTGEVRLKEHLDFEKTQSYEINIE 80
Query: 60 ATDRG 64
A D G
Sbjct: 81 ARDAG 85
>gi|355687770|gb|EHH26354.1| hypothetical protein EGK_16302 [Macaca mulatta]
Length = 4591
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N+ V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2831 VIQIRASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKV 2890
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2891 VASDHGEKIQ 2900
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 VDRG 228
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLAQSGQVRYSLMDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S S F + +GE+ + LD E ++ Y V A
Sbjct: 3045 IMQISAADADIRSNAEITYTL--SGSGAEKFQLNPDTGELKTSAPLDREEQAVYHLLVRA 3102
Query: 61 TDRG 64
TDRG
Sbjct: 3103 TDRG 3106
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V+A D D G NA V Y++ G + N F + V G I A++LD ++ Y+ V
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSIESGIFGNIGNSFMIDPVLGSIKTAKELDRSNQVEYDLIV 1640
Query: 59 VATDRG 64
ATD+G
Sbjct: 1641 KATDKG 1646
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3147 LTRVQATDADSGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3204
Query: 61 TDRG 64
D+G
Sbjct: 3205 VDQG 3208
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS +F + S +G I LD+E S++ F V
Sbjct: 1795 LVIRAADADKDSNALLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDYEETSTFHFTVQVH 1853
Query: 62 DRG 64
D G
Sbjct: 1854 DMG 1856
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y + A
Sbjct: 3252 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEA 3310
Query: 61 TDRG 64
TD G
Sbjct: 3311 TDGG 3314
>gi|344243496|gb|EGV99599.1| Protocadherin Fat 3 [Cricetulus griseus]
Length = 2774
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S S F + S SG I + + LD E +SSY V A
Sbjct: 1929 LTRVQAMDPDVGINRKVVYSLEDSASGV--FSIDSSSGVIILERPLDREQQSSYNISVRA 1986
Query: 61 TDR 63
TD+
Sbjct: 1987 TDQ 1989
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ ++D D G N +V+Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 1085 VLQLVSTDADSGNNKLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVT 1144
Query: 60 ATDRG 64
ATD G
Sbjct: 1145 ATDNG 1149
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V A D D G N V Y+L S S F + S +G I +DLD E+ ++ F
Sbjct: 1612 LAQVRAIDMDWGANGQVTYSL-HSDSHLEKVMEAFDIDSNTGWISTLKDLDHETDPAFSF 1670
Query: 57 PVVATDRGK 65
VVA+D G+
Sbjct: 1671 SVVASDLGE 1679
>gi|26331732|dbj|BAC29596.1| unnamed protein product [Mus musculus]
Length = 802
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ VSA+D D GVN ++Y+L + S + F + ++GE+ + + LDFE SYE +
Sbjct: 262 IITVSATDKDIGVNGQISYSLFQVSDGISKTFSIHPLTGEVRLKEHLDFEKTQSYEINIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P + + S +G++ + + LD+E+ ++EF
Sbjct: 474 ISATDSDSGSNAHITYSL--LPPHDHQLALASFISINADNGQLFVLRALDYEALQAFEFH 531
Query: 58 VVATDRG 64
V ATD G
Sbjct: 532 VGATDGG 538
>gi|431892559|gb|ELK02992.1| Protocadherin beta-5 [Pteropus alecto]
Length = 795
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RVSA D D G V YTL + T F + ++G+I + + LDFE+ Y + A
Sbjct: 261 VVRVSARDLDAGTYGTVAYTLFQGDEVTQPFVIDEITGDIRLKKALDFETTQYYNVEIAA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDGG 324
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA V Y L P + + S+ +G++ + LD+E+ EF
Sbjct: 472 ISATDRDAGANAQVTYAL--LPPQDPQLPLASLVSINADNGQLFALRALDYEALRVLEFG 529
Query: 58 VVATDRG 64
V A DRG
Sbjct: 530 VGAADRG 536
>gi|395736272|ref|XP_003776724.1| PREDICTED: protocadherin beta-13 [Pongo abelii]
Length = 781
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDADTGVNGEISYSLFQASDEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLASLVSINADKGHLFALRSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V A+DRG
Sbjct: 531 VGASDRG 537
>gi|380790103|gb|AFE66927.1| protocadherin Fat 1 precursor [Macaca mulatta]
Length = 4588
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N+ V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 VDRG 228
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD ++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQVEYDLIVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLAQSGQVRYSLMDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S S F + +GE+ + LD E ++ Y V A
Sbjct: 3042 IMQISAADADIRSNAEITYTL--SGSGAEKFQLNPDTGELKTSAPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TDRG
Sbjct: 3100 TDRG 3103
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADSGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS +F + S +G I LD+E S++ F V
Sbjct: 1792 LVIRAADADKDSNALLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDYEETSTFHFTVQVH 1850
Query: 62 DRG 64
D G
Sbjct: 1851 DMG 1853
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y + A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D N ++Y L + S++ +HF++ S +G I + + LD+E + V
Sbjct: 2302 VVQVRATDSDSEPNRGISYQLSGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRHTIFVR 2361
Query: 60 ATDRG 64
A D G
Sbjct: 2362 AVDGG 2366
>gi|296192993|ref|XP_002744345.1| PREDICTED: protocadherin beta-13 isoform 1 [Callithrix jacchus]
Length = 798
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE+ SYE V
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASDEIGKTFKINPLTGEIELKKQLDFENLQSYEVNVE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLASLVSINPDNGHLFALRSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|148747868|ref|NP_444366.3| protocadherin beta 11 precursor [Mus musculus]
gi|14039454|gb|AAK53229.1|AF326304_1 protocadherin-betaK [Mus musculus]
gi|13876282|gb|AAK26061.1| protocadherin beta 11 [Mus musculus]
gi|148678213|gb|EDL10160.1| mCG141285 [Mus musculus]
gi|182888197|gb|AAI60342.1| Protocadherin beta 11 [synthetic construct]
Length = 797
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G+ V Y+L + + F + V+GEI ++++LDFE S Y + A
Sbjct: 261 VVTVSARDLDSGIYGNVAYSLFQGDGLSQPFVIDEVTGEIRLSKELDFEGISHYNIEIAA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDGG 324
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 4 VSASDPDCGVNAMVNYTL--GESP--SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+SA+D D G NA + Y+L + P + + + +G++ + + LD+ES ++EF V
Sbjct: 472 ISATDSDSGSNAHITYSLLLPQDPQLALASLISINPDNGQLFVLRALDYESLQAFEFRVG 531
Query: 60 ATDRG 64
ATD+G
Sbjct: 532 ATDQG 536
>gi|449673392|ref|XP_004207945.1| PREDICTED: protocadherin Fat 4-like [Hydra magnipapillata]
Length = 2166
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+++ASD D G N Y + SP+ ++HF++ S +G I A LD+E+ SSY +
Sbjct: 765 VLKITASDLDIGKNGQFVYKIKSSPN-SHHFFINSSTGVIMTATALDYETVSSYILNIET 823
Query: 61 TDRG 64
D+G
Sbjct: 824 IDKG 827
>gi|307179933|gb|EFN68068.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Camponotus floridanus]
Length = 998
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
A+DPD G V Y L ++ F + VSG + Q LDFE R ++ +VA DRG+
Sbjct: 819 ATDPDEGAGGDVEYFLSDAMESEGFFKVDKVSGTVRTTQSLDFEERQAHTLTIVARDRGE 878
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A D D G N + Y+ E T+ F + VSG I I + L + R+ +E V+A
Sbjct: 10 ILRVIAEDADLGRNGEIYYSFAEE---TDQFAVHPVSGVITITRPLRYAERAIHELVVLA 66
Query: 61 TDRG 64
DRG
Sbjct: 67 KDRG 70
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R +A+D D G NA V Y+L + TN F + V+G + + LD E + YE + A
Sbjct: 706 VWRANATDADLGDNARVTYSL---VTETNDFRVDPVTGVLSVFGKLDRERQEIYELRIRA 762
Query: 61 TDRG 64
D G
Sbjct: 763 RDNG 766
>gi|431918060|gb|ELK17288.1| Protocadherin Fat 2 [Pteropus alecto]
Length = 4424
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+R +Y F V
Sbjct: 2892 VIQVTANDQDTGNDGQVSYRLPVDPDSNIHELFAIDSETGWITTLQELDCETRQTYHFYV 2951
Query: 59 VATDRGKETQ 68
+A D G+ Q
Sbjct: 2952 MAYDNGQTIQ 2961
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3416 VLTVSATDEDGPLNSAITYSLVGG-NQLGHFDIHPKKGELQVAKALDWEQTSSYSLRLRA 3474
Query: 61 TDRGK 65
TD G+
Sbjct: 3475 TDSGR 3479
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2163 LFQVSATDQDLGVNGAVTYAFAED---YTYFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2219
Query: 61 TDRG 64
D G
Sbjct: 2220 RDGG 2223
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ ++LD+E++ + V
Sbjct: 2365 VIQLLASDQDSGQNRDVSYQIIEDGSDVSKFFQINGSTGEMSTVKELDYEAQQHFHVKVR 2424
Query: 60 ATDRG 64
A DRG
Sbjct: 2425 AMDRG 2429
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D GVNA V+Y+ + + F + ++ G I +A+ LD + Y V A
Sbjct: 1648 LLQVRAMDSDRGVNAEVHYSFLKG-NNEGFFNINTLLGIITLAEKLDQAKHARYTLTVKA 1706
Query: 61 TDRG 64
D+G
Sbjct: 1707 EDQG 1710
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y R+ F + SG + +A L+ R YE V+A D
Sbjct: 169 QVTATDADLGQNAEFYYAFN---MRSEIFAIHPTSGVVTLAGKLNVTWRGKYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +GE+ LD E + Y A
Sbjct: 3106 ILKVSATDLDSDTNAQITYSL-HGPG-ADEFKLDPHTGELTTLTALDRERKDIYSLVAKA 3163
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3164 TDGGGQS 3170
>gi|50512334|gb|AAT77562.1| protocadherin alpha 6 [Rattus norvegicus]
Length = 946
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D G N+ ++Y+ SP + F + + +GEI I +LDFE Y+ V
Sbjct: 261 VIRLNASDRDEGTNSAISYSFNRLVSPRILDQFSIDADTGEIVIQGNLDFEQVDVYKIHV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|41223266|emb|CAD92432.1| protocadherin [Homo sapiens]
Length = 841
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 305 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 362
Query: 61 TDRG 64
D G
Sbjct: 363 KDNG 366
>gi|351705185|gb|EHB08104.1| Protocadherin Fat 4, partial [Heterocephalus glaber]
Length = 3672
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+DPD G NA + Y+ SP+ F + SGEI I LDFE YE V
Sbjct: 1205 VIKLNATDPDDGTNADIVYSFRRPISPAVVYAFNINPESGEIRIKDKLDFEENKFYEISV 1264
Query: 59 VATDRG 64
A D+G
Sbjct: 1265 EAVDKG 1270
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N + Y+L S F + + +GE+ ++ LD+E SSY+ V
Sbjct: 1963 VVKLNASDPDEGSNGELRYSLSSYTSDRERQLFSIDANTGEVRVSGALDYEEASSYQIYV 2022
Query: 59 VATDRG 64
ATDRG
Sbjct: 2023 QATDRG 2028
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA V Y+L P R H + S+ +G++ + LD+E+ ++EF
Sbjct: 3152 ISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADTGQLFALRALDYETLRAFEFR 3211
Query: 58 VVATDRG 64
V A DRG
Sbjct: 3212 VGAADRG 3218
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA V Y+L P R H + S+ +G++ + LD+E+ ++EF
Sbjct: 3586 ISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADTGQLFALRALDYETLRAFEFR 3645
Query: 58 VVATDRG 64
V A DRG
Sbjct: 3646 VGAADRG 3652
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ +ASD D GVN + Y+ P + F++ +VSGEI + +DFE +Y+ V
Sbjct: 662 VIHANASDADEGVNGDITYSFSSDVPPDIKSKFHIDAVSGEITVIGVIDFEESKAYKIQV 721
Query: 59 VATDRG 64
A D+G
Sbjct: 722 EAVDQG 727
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++++A+D D G+N V Y+L PS F + +GE+ + LD+E YE V
Sbjct: 230 VIKLNATDRDEGLNGEVTYSLKSIKPSGRPFFTLDGNNGEVRVNGTLDYEENKFYEIEVQ 289
Query: 60 ATDRG 64
ATD+G
Sbjct: 290 ATDKG 294
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+A+D D G N + Y+L ++P F + S +GE+ + LDFES +Y+ +
Sbjct: 2505 VVMVTATDLDEGTNKEIIYSLSQNPETILQTFQIDSQTGEVRLRGPLDFESIETYDIDIQ 2564
Query: 60 ATDRG 64
ATD G
Sbjct: 2565 ATDGG 2569
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSA D D G V+Y L + F + V+GEI + + LDFE SY +
Sbjct: 3374 ILGVSARDMDAGNFGSVSYGLFQPSDEIKQTFSINEVTGEIRLKKKLDFEKIKSYHVEIE 3433
Query: 60 ATDRG 64
ATD G
Sbjct: 3434 ATDGG 3438
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
VSA D D G ++Y ++ F + + SGE+ + Q LD+ES +Y + A D
Sbjct: 2943 VSARDLDIGTYGQISYAFSQASEDIRKTFQINANSGELLLKQKLDYESVQTYTVNIQAID 3002
Query: 63 RG 64
G
Sbjct: 3003 GG 3004
>gi|307190371|gb|EFN74430.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 3233
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+++ DPD G NA V+Y+ ++P F++ ++SG + +A LD E + Y VVA
Sbjct: 1024 VIRITSRDPDIGQNANVSYSFTDNPGE--KFFIDALSGNVTVAGYLDREEQDEYLLKVVA 1081
Query: 61 TD 62
D
Sbjct: 1082 AD 1083
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N +V Y + R N F++ S++G + I + LD++ Y+ + A
Sbjct: 1344 ILTVSAVDDDNGPNGIVRYKISAGNER-NEFFVHSITGAVIILKPLDYDLVQEYQLNITA 1402
Query: 61 TDRGKETQ 68
TD G E +
Sbjct: 1403 TDLGFEPK 1410
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G N V Y L + S T F + +G+I +LD E +SYE V ATD
Sbjct: 923 KVTATDRDFGENGQVMYHLVDDFSET--FIIDGNTGQIETNAELDREKIASYELVVEATD 980
Query: 63 RG 64
+G
Sbjct: 981 QG 982
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G N V Y L ++ F + V G + ++ LD E +S+Y V+A
Sbjct: 289 VMAIKAIDRDEGRNGYVEYMLEDNDLP---FTLGLVDGLLRVSGPLDREQKSNYTLAVIA 345
Query: 61 TDRGKETQ 68
DRG+ ++
Sbjct: 346 RDRGEPSR 353
>gi|443710968|gb|ELU04950.1| hypothetical protein CAPTEDRAFT_218758 [Capitella teleta]
Length = 1129
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSA+D D G N V Y++ E+ +R N F + +G I LD+E + Y F V+A
Sbjct: 477 LLRVSATDRDSGENGQVRYSI-EAGARMN-FTIHPTTGVISSLVKLDYEINTEYTFAVIA 534
Query: 61 TDRGKETQ 68
TD+ ++ +
Sbjct: 535 TDQNRDAR 542
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
R+ A+D D G N V Y L + S F + S SG I ++ LD E+ SY V+A+D
Sbjct: 263 RILATDTDSGENGRVVYDLQDPVSP---FKVNSTSGIITVSGLLDREATESYSLTVLASD 319
Query: 63 RG 64
G
Sbjct: 320 LG 321
>gi|291387487|ref|XP_002710306.1| PREDICTED: protocadherin beta 2 [Oryctolagus cuniculus]
Length = 819
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFPVVA 60
VSASD D G NA V Y+L P + + + SV SG++ + LD+E+ ++EF V A
Sbjct: 477 VSASDRDAGANAQVTYSLLPPPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRA 536
Query: 61 TDRG 64
DRG
Sbjct: 537 ADRG 540
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
VSA D D G N ++Y ++ F + + SGE+ + Q+LDFES +Y + A D
Sbjct: 268 VSARDSDIGTNGQISYIFSQASEDIRKTFQINAKSGELILTQELDFESVQTYTVNIQAID 327
Query: 63 RG 64
G
Sbjct: 328 GG 329
>gi|403255762|ref|XP_003920580.1| PREDICTED: protocadherin gamma-B2 [Saimiri boliviensis boliviensis]
Length = 822
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D G+NA + Y+ + HF+ + +GEI DLDFE +SY +
Sbjct: 261 VLQVTATDKDEGINAEITYSFHNVDEQVKHFFNLNEKTGEIKTKDDLDFEIANSYTLSIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
>gi|309266756|ref|XP_003086854.1| PREDICTED: protocadherin gamma-A10-like, partial [Mus musculus]
Length = 458
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES-PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D G N V YT +S ++ + F + +GEI I+++LD+E S YE +
Sbjct: 259 LLKVTATDKDEGANGEVTYTFRKSLDTQLSKFQLDKHTGEIKISENLDYEEISFYEIEIQ 318
Query: 60 ATDRG 64
A D G
Sbjct: 319 AEDGG 323
>gi|41223264|emb|CAD92431.1| protocadherin [Homo sapiens]
Length = 831
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 305 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 362
Query: 61 TDRG 64
D G
Sbjct: 363 KDNG 366
>gi|348582890|ref|XP_003477209.1| PREDICTED: protocadherin alpha-1-like [Cavia porcellus]
Length = 808
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++ASD D GVN V ++ G SP+ F ++ SGEI + +LD+E SYE +
Sbjct: 261 VITLNASDADEGVNGEVVFSFGSDISPNIQEKFKIEPSSGEIRLIDNLDYEDTKSYEIQI 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 KAVDKG 326
>gi|327270407|ref|XP_003219981.1| PREDICTED: protocadherin gamma-A6-like [Anolis carolinensis]
Length = 810
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A+D D G+N V Y + R + F + S +GEI + ++LD+E S YEF V A D
Sbjct: 262 VRATDLDEGINGEVKYFFEDITKRISQMFLLNSTTGEIILVRNLDYEESSWYEFEVQAMD 321
Query: 63 RG 64
G
Sbjct: 322 GG 323
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD G+N++ NY L + +NHF ++ G E+ + Q LD E + Y +
Sbjct: 155 ARDPDLGINSIQNYEL----TGSNHFSLEIQRGENGARQAELVLDQPLDREEQPIYNLIL 210
Query: 59 VATDRG 64
A D G
Sbjct: 211 TAADGG 216
>gi|326918941|ref|XP_003205743.1| PREDICTED: protocadherin Fat 4-like [Meleagris gallopavo]
Length = 5008
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S T+ F + S +G I LD E R++Y+ VVATD
Sbjct: 750 VSATDPDMGPNGTVKYSI--SAGDTSRFQVHSKTGIITTKIALDREERTAYQLQVVATDG 807
Query: 64 G 64
G
Sbjct: 808 G 808
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + Y+L N F + ++ GE+ + +LD E+ S+Y VVA
Sbjct: 2108 VFKAQATDPDSGPNSYIEYSLLRP--LGNKFSIGTIDGEVRLIGELDREAVSNYTLTVVA 2165
Query: 61 TDRGK 65
TD+G+
Sbjct: 2166 TDKGQ 2170
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S +G++ + LD E+ +SY + A
Sbjct: 1268 VLRVSASDVDEGTNGLIHYSVIKG-NEEKQFAIDSSTGQVTLVGKLDHEATASYSLVIQA 1326
Query: 61 TDRG 64
D G
Sbjct: 1327 VDSG 1330
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1376 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1432
Query: 62 DRGK 65
D+G+
Sbjct: 1433 DQGR 1436
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A+D D +N + Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1478 VISVTANDSDADINGQLTYAIIQQTPRGNHFRIDEVRGTIFTNAEIDREFANLFELTVKA 1537
Query: 61 TDRG 64
TD+
Sbjct: 1538 TDQA 1541
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y + S + +F + + +G + +A+ LDFE ++ V ATD
Sbjct: 3135 VSARDRDAAMNGLIRYNI-SSGNEAGNFAINTTTGTLTLAKPLDFELCQKHDLIVTATDG 3193
Query: 64 G 64
G
Sbjct: 3194 G 3194
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A D D G+N + Y + E + N F + +GEI + LD E S Y + A
Sbjct: 2711 LLTVAAVDRDSGLNGQLIYEIIEGNTE-NSFNINRATGEIRSIRPLDREKLSQYTLTIKA 2769
Query: 61 TDRGKETQ 68
+D+G Q
Sbjct: 2770 SDKGTPLQ 2777
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V++SD D NA++ T G S F + +G+I + LD E+R +Y VVA
Sbjct: 2407 ILLVNSSDADASRNAVIRLTGGNS-----QFTINPSTGQIITSALLDRETRENYTLVVVA 2461
Query: 61 TDRG 64
+D G
Sbjct: 2462 SDGG 2465
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P F + +G I + LD + +Y+ ++A
Sbjct: 951 IFQAKALDPDEGVNGMVLYSLKQNPK--GLFSINEQTGAISLIGQLDINA-GTYQVEILA 1007
Query: 61 TDRG 64
+D G
Sbjct: 1008 SDMG 1011
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D G+N + YT+ E F++ V+G + + LD+E++ Y + A D
Sbjct: 1902 ILATDDDSGINGEITYTVSED-DEEGMFFLNPVTGVFNLTRALDYEAQQYYILTIRAEDG 1960
Query: 64 GKE 66
G +
Sbjct: 1961 GGQ 1963
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R++ASD D G NA++ Y + S S + F + +G I LD+E++ SY + A
Sbjct: 3237 VIRLNASDADSGPNAVIAYAIQSSDS--DLFVIDPNTGTITTQGFLDYETKQSYHLTIKA 3294
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F++ SG++ + LD E RS Y V A
Sbjct: 1798 IMQLTAMDADEGANALVTYTIISGAD--DSFHVDPESGDLIATKRLDRERRSKYSLLVRA 1855
Query: 61 TD 62
D
Sbjct: 1856 DD 1857
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G+N+ + Y L S + F + S SGE+ + Q LD E++ Y + A
Sbjct: 2303 ILQVVARDDDQGLNSKLTYVL-VSGNEEGAFTL-SASGELRLVQSLDRETKEQYVLLITA 2360
Query: 61 TDRG 64
D G
Sbjct: 2361 ADSG 2364
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH------FYMKSVSGEICIAQDLDFESRSSY 54
+L+V+A+D D G NA + Y L F + SG I I + LD+E Y
Sbjct: 259 VLQVAAADADEGTNADIRYRLEGGDGGGGEGASSLPFEVDPESGVIRIREHLDYELCQQY 318
Query: 55 EFPVVATDRG 64
V ATDRG
Sbjct: 319 SLTVQATDRG 328
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D GVN + Y++ E + G++ I +LD E + Y VVA
Sbjct: 1054 FFKVQASDKDSGVNGEIAYSIIEG--NAGDAFGIFPDGQLYIKSELDRELQERYVLLVVA 1111
Query: 61 TDRGKE 66
+DR E
Sbjct: 1112 SDRAVE 1117
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLRVSA-SDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V+A D D G+N+ V Y L + S+TN F + +G I ++ L + + F V
Sbjct: 3026 LIKVTAVDDKDFGLNSEVEYFLSDE-SKTNKFRLDRSTGWISVSSSLMADLNKKFLFKVK 3084
Query: 60 ATDRGK 65
A D+G
Sbjct: 3085 AKDKGN 3090
>gi|262263282|tpg|DAA06583.1| TPA_inf: protocadherin beta 6 [Anolis carolinensis]
Length = 807
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV A D D G NA + Y+ P + N F++ ++GEI ++D+E ++YE + AT
Sbjct: 259 RVEARDLDFGSNAQITYSFHRIPEKLYNLFHLNEMTGEITTFGEVDYEKETNYEMTIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|403256580|ref|XP_003920947.1| PREDICTED: uncharacterized protein LOC101030360 [Saimiri
boliviensis boliviensis]
Length = 1858
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE V
Sbjct: 930 VVKVSATDVDTGVNGEISYSLFQASDEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNVE 989
Query: 60 ATDRG 64
A D G
Sbjct: 990 ARDAG 994
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ VSA D D G N ++YT + + F + SGEI + LDFES SY +
Sbjct: 261 VVTVSAWDLDSGTNGELSYTFSHASEDIHKTFEIHQKSGEITLTAPLDFESIESYSMIIQ 320
Query: 60 ATDRG 64
ATD G
Sbjct: 321 ATDGG 325
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ +SA D D G + ++YT + F + +SGE+ + LDFE+ SY +
Sbjct: 1561 IVTISAKDLDAGNHGKISYTFFHASEDVRKTFEINPMSGEVNLRSPLDFEAIQSYTINIQ 1620
Query: 60 ATDRG 64
ATD G
Sbjct: 1621 ATDGG 1625
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYM-------KSVSGEICIAQDLDFESRSS 53
L SA D D G N++ NYT+ S +HFY+ + + E+ + + LD+E ++
Sbjct: 1452 FLLESAQDLDVGSNSLQNYTI----SPNSHFYIRIPDSGDRKIYPELVLDRALDYEEKAE 1507
Query: 54 YEFPVVATDRG 64
+ A D G
Sbjct: 1508 LRLTLTALDGG 1518
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSS 53
L SA D D GVNA+ +YT+ S +HF++K E+ + + LD+E +
Sbjct: 152 FLLESAKDSDVGVNAVKSYTI----SPNSHFHIKMRVNPDNRKYPELVLDKALDYEEQPE 207
Query: 54 YEFPVVATDRG 64
F + A D G
Sbjct: 208 LSFILTALDGG 218
>gi|397518026|ref|XP_003829199.1| PREDICTED: protocadherin alpha-8 [Pan paniscus]
Length = 814
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N ++Y+ +HF + +GEI I +LDFE + Y+ +
Sbjct: 261 VIKLNASDPDEGANGAISYSFNSLVETMVIDHFSIDRNTGEIVIRGNLDFEQENLYKIRI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|345793799|ref|XP_003433807.1| PREDICTED: protocadherin gamma-C4 [Canis lupus familiaris]
Length = 856
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF +
Sbjct: 261 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDI 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|281345412|gb|EFB20996.1| hypothetical protein PANDA_000353 [Ailuropoda melanoleuca]
Length = 3819
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+D D GVNA + Y+ F+ + +GEI D DFE +SY F V
Sbjct: 261 VLRVTATDQDEGVNAEITYSFHNVDELVEQFFNLDKRTGEITTKDDFDFEIANSYTFSVE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L ++A+DPD G+N + Y+ E + F + S GEI Q LD+E Y VV
Sbjct: 1047 LLTLTATDPDEGINGELTYSFRNEEDKISETFKLDSNLGEISTLQPLDYEESRFYLMEVV 1106
Query: 60 ATDRG 64
A D G
Sbjct: 1107 AQDGG 1111
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D GVNA + Y + + F + S +G + +LDFE R SY V
Sbjct: 1716 VLSVMATDLDEGVNAEITYAFINTGNVVKQLFKLDSKTGVLTTGGELDFEERESYTIGVE 1775
Query: 60 ATDRGKET 67
A D G+ T
Sbjct: 1776 AKDGGRHT 1783
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-GEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D GV+A V Y+ + + + ++S GEI + +LD+E YE +
Sbjct: 2530 VLTVNATDQDEGVHAEVTYSFLRVTEKISKIFCLNISTGEISTSANLDYEDSRFYELDIE 2589
Query: 60 ATDR 63
A DR
Sbjct: 2590 ARDR 2593
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A D D GVN V Y+ + + F + +GE+ + LD+E S YE V
Sbjct: 3255 LLTVHAVDLDEGVNGEVTYSFRKITQKILQIFQLNPHTGELSTLEGLDYEEFSYYEMQVQ 3314
Query: 60 ATD 62
A D
Sbjct: 3315 AQD 3317
>gi|119514191|gb|ABL75854.1| protocadherin 2A14 [Takifugu rubripes]
Length = 935
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ R+ ASDPD G N + YTLG++ R + F + +++G I + +D+E Y+ V
Sbjct: 263 VFRLLASDPDEGSNGEIEYTLGKTLRRKIYDIFELDTITGIITVKGTVDYEENEIYKLDV 322
Query: 59 VATDRG 64
A+D+G
Sbjct: 323 EASDKG 328
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ VSA+D D NA+++Y++ T+ + S +G+I + DFE+ +++F VVA
Sbjct: 477 IFSVSATDNDVSENAVISYSIARLNDVTSFLNVNSENGQISALKSFDFETLKTFQFQVVA 536
>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
Length = 4590
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2830 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2889
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2890 VASDHGEKIQ 2899
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V+A D D G NA V Y++ G + N F + V G I A++LD +++ Y+ V
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSIESGNIGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMV 1640
Query: 59 VATDRG 64
ATD+G
Sbjct: 1641 KATDKG 1646
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVNIARPLDRELQHEHSLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3146 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3203
Query: 61 TDRG 64
D+G
Sbjct: 3204 VDQG 3207
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3044 IMQISATDADIRSNAEITYTLLGSGAEK--FKLNPDTGELKTSTPLDREEQAVYHLLVRA 3101
Query: 61 TDRG 64
TD G
Sbjct: 3102 TDGG 3105
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3251 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3309
Query: 61 TDRG 64
TD G
Sbjct: 3310 TDGG 3313
>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
member 7; AltName: Full=Cadherin-related tumor suppressor
homolog; AltName: Full=Protein fat homolog; Contains:
RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
Precursor
Length = 4588
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---VTDTDTFSIDSVTGVVNIARPLDRELQHEHSLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 IMQISATDADIRSNAEITYTLLGSGAEK--FKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
>gi|410225470|gb|JAA09954.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
gi|410225472|gb|JAA09955.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQPLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 ILQVSATDADIRSNAEITYTLLGSGAEK--FKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
>gi|397506036|ref|XP_003823543.1| PREDICTED: protocadherin Fat 1 [Pan paniscus]
Length = 4588
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQPLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 ILQVSATDADIRSNAEITYTLLGSGAEK--FKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
>gi|332820729|ref|XP_003310638.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Pan troglodytes]
Length = 4588
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 ILQVSATDADIRSNAEITYTLLGSGAEK--FKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
>gi|301753509|ref|XP_002912641.1| PREDICTED: protocadherin gamma-B2-like [Ailuropoda melanoleuca]
Length = 844
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+D D GVNA + Y+ F+ + +GEI D DFE +SY F V
Sbjct: 261 VLRVTATDQDEGVNAEITYSFHNVDELVEQFFNLDKRTGEITTKDDFDFEIANSYTFSVE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
>gi|194219772|ref|XP_001917771.1| PREDICTED: protocadherin-12 [Equus caballus]
Length = 1199
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G+N ++Y + +SP ++ + S +GE+ + LD+E +++EF V+A
Sbjct: 479 LITIKAHDADLGINGKISYRIQDSPV-SHLVAIDSDTGEVTAQRSLDYEQMANFEFRVIA 537
Query: 61 TDRGK 65
DRG+
Sbjct: 538 EDRGQ 542
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G N V + L + P + F + + +G++ + Q LD+E +YE V
Sbjct: 263 LINLTATDPDQGPNGEVEFFLSKHVPPEVLDTFSIDAKTGQVILRQPLDYEKNPAYEVDV 322
Query: 59 VATDRG 64
A D G
Sbjct: 323 QARDLG 328
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD G N + +YTL SPS HF + + G E+ + ++LD E S ++ +
Sbjct: 159 ALDPDTGPNTLYSYTL--SPSE--HFALDVIVGPDETKHAELVVVKELDREIHSYFDLVL 214
Query: 59 VATDRG 64
A D G
Sbjct: 215 TAYDSG 220
>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
Length = 4592
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S F + +G I ++LD E R+SY+ V
Sbjct: 2832 VIQIRASDLDSGANGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKV 2891
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2892 VASDHGEKVQ 2901
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 947 IMWLEAYDPDVGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQQLDFEKKQLYNLT 1001
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1002 VRAKDKGK 1009
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LDF YE ++A
Sbjct: 169 IARVSATDADIGTNGEFYYSFKD---RTDVFAIHPTSGVVVLTGRLDFLETQLYELEILA 225
Query: 61 TDRG 64
DRG
Sbjct: 226 ADRG 229
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD + Y+ V A
Sbjct: 1585 VLQVTALDKDKGRNAEVLYSI-ESGNIGNSFTIDPILGSIKTARELDRSHQVDYDLMVKA 1643
Query: 61 TDRG 64
TD+G
Sbjct: 1644 TDKG 1647
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L ES F + SG I + + LD E ++ Y + A
Sbjct: 3148 LTRVQATDADTGLNRKISYSLVESAD--GQFSINERSGIIQLEKHLDRELQAVYTLTLKA 3205
Query: 61 TDRG 64
D+G
Sbjct: 3206 VDQG 3209
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D N ++Y L G +HF++ S +G I + + LD+E + V
Sbjct: 2306 VLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTGLISLVRALDYEQSQQHRIFVR 2365
Query: 60 ATDRG 64
A D G
Sbjct: 2366 AVDGG 2370
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS N+F + +G I LD+E ++ F V
Sbjct: 1796 LVIRATDADRESNALLVYQIVE-PSVHNYFAIDPTTGAIRTVLSLDYEETHAFHFTVQVH 1854
Query: 62 DRG 64
D G
Sbjct: 1855 DMG 1857
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y + S + F + S +G I I + LD+ES Y V A
Sbjct: 3253 VLQVYAASRDIEANAEITYAI-ISGNEHGKFSIDSKTGAIFIIESLDYESSHEYYLTVEA 3311
Query: 61 TDRG 64
TD G
Sbjct: 3312 TDGG 3315
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D NA + YTL S + F + +GE+ LD E ++ Y V A
Sbjct: 3046 VMQVSATDADIRSNAEITYTLFGSGAEK--FKLNPDTGELRTLALLDREEQAVYNLLVKA 3103
Query: 61 TDRG 64
TD G
Sbjct: 3104 TDGG 3107
>gi|109732291|gb|AAI15721.1| Protocadherin beta 16 [Mus musculus]
Length = 802
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ VSA+D D GVN ++Y+L + S + F + ++GE+ + + LDFE SYE +
Sbjct: 262 IITVSATDKDIGVNGQISYSLFQVSDDISKTFSIHPLTGEVRLKEHLDFEKTQSYEINIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P + + S +G++ + + LD+E+ ++EF
Sbjct: 474 ISATDSDSGSNAHITYSL--LPPHDHQLALASFISINADNGQLFVLRALDYEALQAFEFH 531
Query: 58 VVATDRG 64
V ATD G
Sbjct: 532 VGATDGG 538
>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
Length = 4495
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVKIARSLDRELQHEHYLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 IMQISATDADIRSNAEITYTLLGSGAE--KFKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D N ++Y + E+ S++ +HF++ S +G I + + LD+E + V
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFENHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ATDRG 64
A D G
Sbjct: 2362 AVDGG 2366
>gi|410349159|gb|JAA41183.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQPLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 ILQVSATDADIRSNAEITYTLLGSGAEK--FKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
>gi|410304872|gb|JAA31036.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQPLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 ILQVSATDADIRSNAEITYTLLGSGAEK--FKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
>gi|363746580|ref|XP_425190.3| PREDICTED: protocadherin gamma-A7-like, partial [Gallus gallus]
Length = 405
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV+A+D D G + V YT E S +N F+++ ++G I + +LDFE YE V
Sbjct: 262 LLRVTATDLDDGTSGDVQYTFPEISDKASNIFHLEPITGAIKLVMNLDFEEADFYELGVQ 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDGG 326
>gi|119582405|gb|EAW62001.1| hCG1982192, isoform CRA_p [Homo sapiens]
Length = 814
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N ++Y+ +HF + +GEI I +LDFE + Y+ +
Sbjct: 261 VIKLNASDPDEGANGAISYSFNSLVETMVIDHFSIDRNTGEIVIRGNLDFEQENLYKILI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|148728175|ref|NP_444371.3| protocadherin beta 16 precursor [Mus musculus]
gi|13876292|gb|AAK26066.1| protocadherin beta 16 [Mus musculus]
gi|109733261|gb|AAI16626.1| Protocadherin beta 16 [Mus musculus]
gi|148678208|gb|EDL10155.1| mCG141291 [Mus musculus]
Length = 802
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ VSA+D D GVN ++Y+L + S + F + ++GE+ + + LDFE SYE +
Sbjct: 262 IITVSATDKDIGVNGQISYSLFQVSDDISKTFSIHPLTGEVRLKEHLDFEKTQSYEINIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P + + S +G++ + + LD+E+ ++EF
Sbjct: 474 ISATDSDSGSNAHITYSL--LPPHDHQLALASFISINADNGQLFVLRALDYEALQAFEFH 531
Query: 58 VVATDRG 64
V ATD G
Sbjct: 532 VGATDGG 538
>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
Length = 4590
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S F + +G I ++LD E R+SY+ V
Sbjct: 2830 VIQIRASDLDSGANGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKV 2889
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2890 VASDHGEKVQ 2899
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 947 IMWLEAYDPDVGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQQLDFEKKQLYNLT 1001
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1002 VRAKDKGK 1009
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LDF YE ++A
Sbjct: 169 IARVSATDADIGTNGEFYYSFKD---RTDVFAIHPTSGVVVLTGRLDFLETQLYELEILA 225
Query: 61 TDRG 64
DRG
Sbjct: 226 ADRG 229
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD + Y+ V A
Sbjct: 1583 VLQVTALDKDKGRNAEVLYSI-ESGNIGNSFTIDPILGSIKTARELDRSHQVDYDLMVKA 1641
Query: 61 TDRG 64
TD+G
Sbjct: 1642 TDKG 1645
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L ES F + SG I + + LD E ++ Y + A
Sbjct: 3146 LTRVQATDADTGLNRKISYSLVESAD--GQFSINERSGIIQLEKHLDRELQAVYTLTLKA 3203
Query: 61 TDRG 64
D+G
Sbjct: 3204 VDQG 3207
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D N ++Y L G +HF++ S +G I + + LD+E + V
Sbjct: 2304 VLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTGLISLVRALDYEQSQQHRIFVR 2363
Query: 60 ATDRG 64
A D G
Sbjct: 2364 AVDGG 2368
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS N+F + +G I LD+E ++ F V
Sbjct: 1794 LVIRATDADRESNALLVYQIVE-PSVHNYFAIDPTTGAIRTVLSLDYEETHAFHFTVQVH 1852
Query: 62 DRG 64
D G
Sbjct: 1853 DMG 1855
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y + S + F + S +G I I + LD+ES Y V A
Sbjct: 3251 VLQVYAASRDIEANAEITYAI-ISGNEHGKFSIDSKTGAIFIIESLDYESSHEYYLTVEA 3309
Query: 61 TDRG 64
TD G
Sbjct: 3310 TDGG 3313
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D NA + YTL S + F + +GE+ LD E ++ Y V A
Sbjct: 3044 VMQVSATDADIRSNAEITYTLFGSGAEK--FKLNPDTGELRTLALLDREEQAVYNLLVKA 3101
Query: 61 TDRG 64
TD G
Sbjct: 3102 TDGG 3105
>gi|410948361|ref|XP_003980909.1| PREDICTED: protocadherin gamma-C4 [Felis catus]
Length = 851
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V ++ G +P R N F + +G++ + LDFES + YEF +
Sbjct: 261 LIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDI 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|410267946|gb|JAA21939.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQPLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---LTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 ILQVSATDADIRSNAEITYTLLGSGAEK--FKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
Length = 5019
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + Y+L N F + ++ GE+ + +LD E+ S+Y VVA
Sbjct: 2103 VFKAQATDPDSGPNSYIEYSLLRP--LGNKFSIGTIDGEVRLIGELDREAVSNYTLTVVA 2160
Query: 61 TDRGK 65
TD+G+
Sbjct: 2161 TDKGQ 2165
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ S N F + SV+G I +A+ LD E + SY V +
Sbjct: 2207 LIQVLATDGDEGTNGQVRYSI-VSGDTGNQFRIDSVTGVITVAKPLDREKKPSYMLSVQS 2265
Query: 61 TDRG 64
+DRG
Sbjct: 2266 SDRG 2269
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S T+ F + +G I LD E +++Y+ +VATD
Sbjct: 745 VSATDPDMGPNGTVKYSI--SAGDTSRFQVHGKTGIITTKIALDREEKTAYQLQIVATDG 802
Query: 64 G 64
G
Sbjct: 803 G 803
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S +G++ + LD E+ +SY + A
Sbjct: 1263 VLRVSASDVDEGTNGLIHYSVIKG-NEEKQFAIDSSTGQVTLVGKLDHEATASYSLVIQA 1321
Query: 61 TDRG 64
D G
Sbjct: 1322 VDSG 1325
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA ++Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1371 VTATDSDSGDNADLHYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1427
Query: 62 DRGK 65
D+G+
Sbjct: 1428 DQGR 1431
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A+D D +N + Y + + R NHF + V G I ++D E + +E V A
Sbjct: 1473 VISVTANDSDADINGQLTYAIIQQTPRGNHFRIDEVRGTIFTNAEIDREFANLFELTVKA 1532
Query: 61 TDRG 64
TD+
Sbjct: 1533 TDQA 1536
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N ++ Y + S + +F + + +G + +A+ LDFE +E V ATD
Sbjct: 3145 VSARDRDAAMNGLIRYNI-SSGNEAGNFAINTTTGTLTLAKPLDFELCQKHELIVTATDG 3203
Query: 64 G 64
G
Sbjct: 3204 G 3204
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A D D G+N + Y + E + N F + +GEI + LD E S Y + A
Sbjct: 2721 LLTVAAVDRDSGLNGQLIYEIIEGNTE-NSFSINRATGEIRSVRPLDREKLSRYTLTIKA 2779
Query: 61 TDRGKETQ 68
+D+G Q
Sbjct: 2780 SDKGTPLQ 2787
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V++SD D NA++ T G S F + +G+I + LD E+R +Y VVA
Sbjct: 2417 ILLVNSSDADASRNAVIRLTGGNS-----QFTINPSTGQIITSALLDRETRENYTLIVVA 2471
Query: 61 TDRG 64
+D G
Sbjct: 2472 SDGG 2475
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P F + +G I + LD + +Y+ ++A
Sbjct: 946 IFQAKALDPDEGVNGMVLYSLKQNPK--GLFSINEQTGAISLIGQLDINA-GTYQVEILA 1002
Query: 61 TDRG 64
+D G
Sbjct: 1003 SDMG 1006
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D G+N + YT+ E F++ V+G + + LD+E++ Y + A D
Sbjct: 1897 ILATDDDSGINGEITYTVSED-DEEGMFFLNPVTGVFNLTRALDYEAQQYYILTIRAEDG 1955
Query: 64 GKE 66
G +
Sbjct: 1956 GGQ 1958
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F++ SG++ + LD E RS Y V A
Sbjct: 1793 IMQLTAMDADEGANALVTYTIISGAD--DSFHVDPESGDLIATKRLDRERRSKYSLLVRA 1850
Query: 61 TD 62
D
Sbjct: 1851 DD 1852
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R++ASD D G NA++ Y + S S + F + +G I LD+E++ SY + A
Sbjct: 3247 VIRLNASDADSGPNAVIAYAIQSSDS--DLFVIDPNTGTITTQGFLDYETKQSYHLTIKA 3304
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G+N+ + Y L S + F + S SGE+ + Q LD E + Y + A
Sbjct: 2313 ILQVVARDDDQGLNSKLTYVL-VSGNEEGAFIL-SASGELRLVQSLDRERKEQYVLLITA 2370
Query: 61 TDRG 64
D G
Sbjct: 2371 ADSG 2374
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH------FYMKSVSGEICIAQDLDFESRSSY 54
+L+V+A+D D G NA + Y L F + SG I I + LD+E Y
Sbjct: 254 VLQVAAADADEGTNADIRYRLEGGDGGGGEGASSLPFEVDPESGVIRIRERLDYELCQQY 313
Query: 55 EFPVVATDRG 64
V ATDRG
Sbjct: 314 SLTVQATDRG 323
>gi|351697173|gb|EHB00092.1| Protocadherin-15 [Heterocephalus glaber]
Length = 1274
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 82 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDYYELTVVATD 137
>gi|338713598|ref|XP_001917824.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8-like [Equus
caballus]
Length = 760
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ VSA+D D G N ++Y+L ++P + F + +GEI + + LDFE+ SYE +
Sbjct: 261 IVTVSATDADIGANGEISYSLFQAPEEISKTFEINPKTGEIRLKKQLDFETVQSYEVNIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 ARDAG 325
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA + Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDTDAGANAQLTYSL--LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQPFEFG 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>gi|14165422|ref|NP_114062.1| protocadherin alpha-8 isoform 2 precursor [Homo sapiens]
gi|5457021|gb|AAD43747.1|AF152486_1 protocadherin alpha 8 short form protein [Homo sapiens]
gi|3540162|gb|AAC34318.1| KIAA0345-like 6 [Homo sapiens]
gi|223460544|gb|AAI36751.1| Protocadherin alpha 8 [Homo sapiens]
Length = 814
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N ++Y+ +HF + +GEI I +LDFE + Y+ +
Sbjct: 261 VIKLNASDPDEGANGAISYSFNSLVETMVIDHFSIDRNTGEIVIRGNLDFEQENLYKILI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|262263228|tpg|DAA06605.1| TPA_inf: protocadherin gamma a10 isoform [Anolis carolinensis]
Length = 942
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A+D D G+NA + Y+ + + + F + S +GEI + +LD+E S YEF V ATD
Sbjct: 266 VRATDLDEGINAEIKYSFQKITKKISQIFLLNSTTGEILLIGNLDYEESSLYEFEVQATD 325
Query: 63 RG 64
G
Sbjct: 326 GG 327
>gi|187953337|gb|AAI36750.1| Protocadherin alpha 8 [Homo sapiens]
Length = 814
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N ++Y+ +HF + +GEI I +LDFE + Y+ +
Sbjct: 261 VIKLNASDPDEGANGAISYSFNSLVETMVIDHFSIDRNTGEIVIRGNLDFEQENLYKILI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|449512576|ref|XP_002199124.2| PREDICTED: protocadherin gamma-C3-like, partial [Taeniopygia
guttata]
Length = 772
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L +SASD D G NA + Y G+ P++ F + + G I + ++LDFE Y V
Sbjct: 182 VLNISASDADAGTNAHITYGFGKMPTKVLQKFTVDAQRGTITLQEELDFEDTRGYTLLVE 241
Query: 60 ATDRG 64
A D G
Sbjct: 242 ARDGG 246
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSA+DPD G NA ++YTL + + H F + +G + + LD E + + V
Sbjct: 412 ILNVSATDPDLGRNAHLSYTLLQGDTTFGHLFSINRENGTLYVLTSLDHEDQVEFNMMVQ 471
Query: 60 ATDRG 64
D G
Sbjct: 472 VQDGG 476
>gi|47216301|emb|CAF96597.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2244
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y+L ES + N F + G I +A++LD +S++ YE V A
Sbjct: 335 VLQVTARDKDKGRNAEVVYSL-ESGNFANTFSIDPKLGTITVAKELDRDSKAQYELTVKA 393
Query: 61 TDRG 64
+D G
Sbjct: 394 SDNG 397
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L V ASD D NAM+ Y + E P N+F + S +G I I LD+E R+++ F V
Sbjct: 546 LVVRASDADGDQNAMLIYQIVE-PFAHNYFAIDSNTGAIRITTALDYEERNTFHFTVQVH 604
Query: 62 DRG 64
D G
Sbjct: 605 DLG 607
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR---TNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+++V ASD D G N V Y+L S + F + S +G + ++LD E Y
Sbjct: 1582 VIQVRASDQDSGTNGQVIYSLDARQSSEEISELFAVNSETGWVTTLKELDREKMQRYTIA 1641
Query: 58 VVATDRGKETQ 68
V+ATD+G Q
Sbjct: 1642 VLATDQGDRIQ 1652
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G N V + L E ++ F+ + +G I AQ LD+E +E V
Sbjct: 1056 ILQVDAKDSDTGNNQEVFFQLVEEKGESSDFFTIDRDTGTISTAQLLDYEEIRQHELRVR 1115
Query: 60 ATDRG 64
A DRG
Sbjct: 1116 AVDRG 1120
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASD D NA + Y L + S F + S +GE+ Q LD E + + F + A
Sbjct: 1798 ILQVSASDADIRSNAQIFYELQGAGSEL--FTIDSDTGELKTLQPLDREEQEEHRFKMRA 1855
Query: 61 TDRG 64
D G
Sbjct: 1856 VDGG 1859
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A+D D G N+ + Y+L +S F + +G I + + LD E +S+YE +A+D
Sbjct: 1902 KLLANDVDVGPNSNIIYSLLDSAD--GFFSIDEQTGVISLERPLDRELQSTYELRALASD 1959
Query: 63 RG 64
+G
Sbjct: 1960 QG 1961
>gi|344245256|gb|EGW01360.1| Protocadherin alpha-4 [Cricetulus griseus]
Length = 2770
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+L S T F + SGEI LD+E R++YE V
Sbjct: 567 VVKLNASDADEGSNSEIVYSLSSDVSSTTRTKFQIDPTSGEIRTNGGLDYEERTAYEIQV 626
Query: 59 VATDRG 64
+A+D+G
Sbjct: 627 IASDKG 632
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D G+N V Y+ SP FY+ V+G+I + +DFE SYE +
Sbjct: 1321 VVKVNASDLDEGLNGDVMYSFSTDISPDVKRKFYIDPVTGQITVKGYIDFEECKSYEILI 1380
Query: 59 VATDRGK 65
D+G+
Sbjct: 1381 EGIDKGQ 1387
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++ASD D GVN V ++ G S F + S+ GEI + DLD+E SYE V A
Sbjct: 246 LNASDADEGVNGEVVFSFGNDVSADIQEKFKVDSILGEIRVIGDLDYEKIKSYEIQVKAV 305
Query: 62 DRG 64
D+G
Sbjct: 306 DKG 308
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMV-----NYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
+++++ASD D G+N + N L + S+ F + S SGEI + LD+E R YE
Sbjct: 2125 VIKLNASDADEGMNKEILYFFSNLVLEDVKSK---FTIDSTSGEIKVKGALDYEDRKLYE 2181
Query: 56 FPVVATDR 63
+ A DR
Sbjct: 2182 INIDAVDR 2189
>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
Length = 4587
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S F + +G I ++LD E R+SY+ V
Sbjct: 2830 VIQIRASDLDSGANGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKV 2889
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2890 VASDHGEKVQ 2899
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 947 IMWLEAYDPDVGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQQLDFEKKQLYNLT 1001
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1002 VRAKDKGK 1009
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LDF YE ++A
Sbjct: 169 IARVSATDADIGTNGEFYYSFKD---RTDVFAIHPTSGVVVLTGRLDFLETQLYELEILA 225
Query: 61 TDRG 64
DRG
Sbjct: 226 ADRG 229
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD + Y+ V A
Sbjct: 1583 VLQVTALDKDKGRNAEVLYSI-ESGNIGNSFTIDPILGSIKTARELDRSHQVDYDLMVKA 1641
Query: 61 TDRG 64
TD+G
Sbjct: 1642 TDKG 1645
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L ES F + SG I + + LD E ++ Y + A
Sbjct: 3146 LTRVQATDADTGLNRKISYSLVESAD--GQFSINERSGIIQLEKHLDRELQAVYTLTLKA 3203
Query: 61 TDRG 64
D+G
Sbjct: 3204 VDQG 3207
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D N ++Y L G +HF++ S +G I + + LD+E + V
Sbjct: 2304 VLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTGLISLVRALDYEQSQQHRIFVR 2363
Query: 60 ATDRG 64
A D G
Sbjct: 2364 AVDGG 2368
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS N+F + +G I LD+E ++ F V
Sbjct: 1794 LVIRATDADRESNALLVYQIVE-PSVHNYFAIDPTTGAIRTVLSLDYEETHAFHFTVQVH 1852
Query: 62 DRG 64
D G
Sbjct: 1853 DMG 1855
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y + S + F + S +G I I + LD+ES Y V A
Sbjct: 3251 VLQVYAASRDIEANAEITYAI-ISGNEHGKFSIDSKTGAIFIIESLDYESSHEYYLTVEA 3309
Query: 61 TDRG 64
TD G
Sbjct: 3310 TDGG 3313
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D NA + YTL S + F + +GE+ LD E ++ Y V A
Sbjct: 3044 VMQVSATDADIRSNAEITYTLFGSGAE--KFKLNPDTGELRTLALLDREEQAVYNLLVKA 3101
Query: 61 TDRG 64
TD G
Sbjct: 3102 TDGG 3105
>gi|440902417|gb|ELR53214.1| Protocadherin gamma-A11, partial [Bos grunniens mutus]
Length = 732
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G+N V Y+ S+ + F + S+SG++ I LDFE YE +
Sbjct: 261 VLTVNATDPDEGINGQVVYSFRNVESKASKIFQLNSLSGDVLIQGSLDFEKYRFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AQDGG 325
>gi|326673359|ref|XP_003199856.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 795
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
++RV+A+D D G N + Y+ G+S S F + +++GEI + LD+E + YE +
Sbjct: 263 VIRVNATDSDEGPNGEIVYSFGKSVSSKVQKLFNIDTITGEITVKGLLDYEDKDRYEIDI 322
Query: 59 VATDRG 64
A+D+G
Sbjct: 323 QASDKG 328
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G N+ V+Y + N F + S +GEI + DFE+ +++F
Sbjct: 477 LFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFETSKTFQF 536
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 537 HILATDSG 544
>gi|9256596|ref|NP_061734.1| protocadherin alpha-8 isoform 1 precursor [Homo sapiens]
gi|13878427|sp|Q9Y5H6.1|PCDA8_HUMAN RecName: Full=Protocadherin alpha-8; Short=PCDH-alpha-8; Flags:
Precursor
gi|5456920|gb|AAD43710.1| protocadherin alpha 8 [Homo sapiens]
Length = 950
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N ++Y+ +HF + +GEI I +LDFE + Y+ +
Sbjct: 261 VIKLNASDPDEGANGAISYSFNSLVETMVIDHFSIDRNTGEIVIRGNLDFEQENLYKILI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|262263226|tpg|DAA06603.1| TPA_inf: protocadherin gamma a9 isoform [Anolis carolinensis]
Length = 938
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
V A+D D G+N V Y + R + F + S +GEI + ++LD+E S YEF V A D
Sbjct: 262 VRATDLDEGINGEVKYFFEDITKRISQMFLLNSTTGEIILVRNLDYEESSWYEFEVQAMD 321
Query: 63 RG 64
G
Sbjct: 322 GG 323
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD G+N++ NY L + +NHF ++ G E+ + Q LD E + Y +
Sbjct: 155 ARDPDLGINSIQNYEL----TGSNHFSLEIQRGENGARQAELVLDQPLDREEQPIYNLIL 210
Query: 59 VATDRG 64
A D G
Sbjct: 211 TAADGG 216
>gi|351713430|gb|EHB16349.1| Protocadherin alpha-1 [Heterocephalus glaber]
Length = 781
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D GVN V ++ G SP F + SGEI + LD+E SYE +
Sbjct: 260 VIRLNASDGDRGVNGEVVFSFGNDVSPKIQEKFKIDLSSGEIRLIGTLDYEETKSYEIQI 319
Query: 59 VATDRG 64
A D+G
Sbjct: 320 KAVDKG 325
>gi|348582951|ref|XP_003477239.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-12-like [Cavia
porcellus]
Length = 1180
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G+N ++Y + +SP ++ + +GEI + LD+E +S+EF V+A
Sbjct: 479 LITIKAHDADLGINGEISYRIQDSPV-SHLVAIDPDTGEITAQRSLDYEEMASFEFRVIA 537
Query: 61 TDRGK 65
DRG+
Sbjct: 538 EDRGQ 542
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G N V + LG+ P + F + + +G++ + Q LD+E +YE V
Sbjct: 263 LINLTATDPDQGPNGEVEFFLGKHMPPEVLHTFSVNAKTGQVTLRQPLDYEKNPAYEVDV 322
Query: 59 VATDRGKET 67
A D G +
Sbjct: 323 QARDLGPNS 331
>gi|119582394|gb|EAW61990.1| hCG1982192, isoform CRA_e [Homo sapiens]
Length = 950
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N ++Y+ +HF + +GEI I +LDFE + Y+ +
Sbjct: 261 VIKLNASDPDEGANGAISYSFNSLVETMVIDHFSIDRNTGEIVIRGNLDFEQENLYKILI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
>gi|296485256|tpg|DAA27371.1| TPA: protocadherin alpha 6 [Bos taurus]
Length = 812
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++RV+ASD D G N ++Y+ + +N F + + +GEI I +LDFE+ + Y+ +
Sbjct: 261 VIRVNASDRDEGANGEISYSFNNLVPATVSNQFRIDANTGEIVIQGNLDFENMNLYKIRI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 EATDKG 326
>gi|260783945|ref|XP_002587031.1| hypothetical protein BRAFLDRAFT_244702 [Branchiostoma floridae]
gi|229272165|gb|EEN43042.1| hypothetical protein BRAFLDRAFT_244702 [Branchiostoma floridae]
Length = 405
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A DPD N+ V Y++ P N F + SV+G++ + DLD E+ SY V A
Sbjct: 175 VMTIRAEDPDEERNSYVEYSMASIPG--NKFALDSVTGQLRVNGDLDREATPSYVVTVTA 232
Query: 61 TDRGK 65
TD+G+
Sbjct: 233 TDKGR 237
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N +V Y++ S + N + +V+G I +A+ +D E + Y V A
Sbjct: 279 LVQVVAADVDEGTNGVVRYSI-VSGNTDNDLTINAVTGRISVARLIDHERTTGYNLVVRA 337
Query: 61 TDRG 64
D+G
Sbjct: 338 RDQG 341
>gi|158260375|dbj|BAF82365.1| unnamed protein product [Homo sapiens]
Length = 889
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 506 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 563
Query: 61 TDRG 64
D G
Sbjct: 564 KDNG 567
>gi|149640332|ref|XP_001506771.1| PREDICTED: protocadherin alpha-6 [Ornithorhynchus anatinus]
Length = 842
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++R++ASD D G+N ++ Y+ P+ + F + +GEI +A +LD E+ +SYE PV
Sbjct: 263 VIRLNASDQDEGINKLIMYSFSNLVPAEVKDAFTIDMKTGEIRVAGELDTENTNSYEIPV 322
Query: 59 VATDRG 64
A D+G
Sbjct: 323 EAVDKG 328
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSA DPD NA+V+Y+L + P R +++ + + SG + Q LD E +
Sbjct: 476 IFTVSARDPDAQENALVSYSLVDRPVRERPLSSYVSVHAESGRVYALQPLDHEELELLQV 535
Query: 57 PVVATDRG 64
V A D G
Sbjct: 536 QVNARDAG 543
>gi|14589944|ref|NP_116754.1| protocadherin-11 Y-linked isoform b [Homo sapiens]
gi|13161057|gb|AAK13468.1|AF332216_1 protocadherin 11 [Homo sapiens]
Length = 1048
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 517 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 574
Query: 61 TDRG 64
D G
Sbjct: 575 KDNG 578
>gi|432878322|ref|XP_004073300.1| PREDICTED: protocadherin-11 X-linked-like [Oryzias latipes]
Length = 1306
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D G NA + YTLG P + F++ SG + + + LD E + + F V+A
Sbjct: 485 LIKISATDADSGSNAEIIYTLG--PDAPDGFHIDRRSGILSVGKRLDREKQERFSFIVIA 542
Query: 61 TDRG 64
D G
Sbjct: 543 RDNG 546
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ A+D D G NA +++ S S HF + S +G I + Q LD E ++ V+A
Sbjct: 270 QLHATDADWGSNAQIHFAFSNQISSSTKRHFAINSSTGLITVKQPLDREVTPVHKLIVLA 329
Query: 61 TDRG 64
+D G
Sbjct: 330 SDGG 333
>gi|358413174|ref|XP_003582487.1| PREDICTED: protocadherin alpha-6 [Bos taurus]
gi|359067630|ref|XP_002689290.2| PREDICTED: protocadherin alpha-6 [Bos taurus]
Length = 805
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++RV+ASD D G N ++Y+ + +N F + + +GEI I +LDFE+ + Y+ +
Sbjct: 261 VIRVNASDRDEGANGEISYSFNNLVPATVSNQFRIDANTGEIVIQGNLDFENMNLYKIRI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 EATDKG 326
>gi|14589942|ref|NP_116753.1| protocadherin-11 Y-linked isoform a [Homo sapiens]
gi|10803411|emb|CAC13122.1| protocadherin [Homo sapiens]
Length = 1037
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 506 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 563
Query: 61 TDRG 64
D G
Sbjct: 564 KDNG 567
>gi|354475386|ref|XP_003499910.1| PREDICTED: protocadherin Fat 3-like [Cricetulus griseus]
Length = 4555
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S S F + S SG I + + LD E +SSY V A
Sbjct: 3149 LTRVQAMDPDVGINRKVVYSLEDSASGV--FSIDSSSGVIILERPLDREQQSSYNISVRA 3206
Query: 61 TDR 63
TD+
Sbjct: 3207 TDQ 3209
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ SY V A
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIRDG-SGLGRFSIDDESGVITAADILDRETTGSYWLTVYA 1119
Query: 61 TDRG 64
TDRG
Sbjct: 1120 TDRG 1123
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+
Sbjct: 957 LETQDPDLGLGGQVRYSLIND--YNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDK 1014
Query: 64 GK 65
G+
Sbjct: 1015 GR 1016
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ ++D D G N +V+Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 2305 VLQLVSTDADSGNNKLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVT 2364
Query: 60 ATDRG 64
ATD G
Sbjct: 2365 ATDNG 2369
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V A D D G N V Y+L S S F + S +G I +DLD E+ ++ F
Sbjct: 2832 LAQVRAIDMDWGANGQVTYSL-HSDSHLEKVMEAFDIDSNTGWISTLKDLDHETDPAFSF 2890
Query: 57 PVVATDRGK 65
VVA+D G+
Sbjct: 2891 SVVASDLGE 2899
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE---SPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y++ P N F +G I ++LDFES +Y F
Sbjct: 490 VLTVSASDKDKGENGYITYSIASLNLLPFAINQF-----TGVISTTEELDFESSPETYRF 544
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 545 IVRASDWG 552
>gi|291387492|ref|XP_002710175.1| PREDICTED: protocadherin beta 12 [Oryctolagus cuniculus]
Length = 815
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFPVVA 60
VSASD D G NA V Y+L P + + + SV SG++ + LD+E+ ++EF V A
Sbjct: 473 VSASDRDAGANAQVTYSLLPPPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRA 532
Query: 61 TDRG 64
DRG
Sbjct: 533 ADRG 536
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ SA D D G N ++YT + F + SGE+ + LD+E+ SY +
Sbjct: 261 VVTASAWDSDSGTNGEISYTFSHASEDIRKTFAINRKSGEVTLTGPLDYETTQSYSIIIQ 320
Query: 60 ATDRG 64
ATD G
Sbjct: 321 ATDGG 325
>gi|119514193|gb|ABL75856.1| protocadherin 2A16 [Takifugu rubripes]
Length = 939
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+VSA DPD G N + Y+L E+ + N F + S++G+I + LD+E +Y+ + A
Sbjct: 269 KVSAIDPDEGANGEIEYSLSEAIHQKIYNLFELDSLTGQIKLKGMLDYEESETYKLDIEA 328
Query: 61 TDRG 64
+D+G
Sbjct: 329 SDKG 332
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ VSA+D D NA+++Y++ T+ + S +G+I + DFE+ +++F VVA
Sbjct: 481 IFSVSATDNDVSENAVISYSIARLNDVTSFLNVNSENGQISALKSFDFETLKTFQFQVVA 540
Query: 61 TDRG 64
D G
Sbjct: 541 LDSG 544
>gi|18027280|gb|AAL55729.1|AF277053_1 protocadherin-PC [Homo sapiens]
Length = 1037
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 506 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 563
Query: 61 TDRG 64
D G
Sbjct: 564 KDNG 567
>gi|311250345|ref|XP_003124107.1| PREDICTED: protocadherin gamma-A2-like [Sus scrofa]
Length = 825
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G NA V Y L ++P + F +KS SGEI I + LD+E +E +
Sbjct: 260 ILTVTATDADEGYNAQVAYFLEKTPEEASEVFELKSSSGEITITKSLDYEDAKLHEIDIE 319
Query: 60 ATD 62
A D
Sbjct: 320 AQD 322
>gi|301770757|ref|XP_002920796.1| PREDICTED: protocadherin Fat 2-like [Ailuropoda melanoleuca]
gi|281339749|gb|EFB15333.1| hypothetical protein PANDA_009583 [Ailuropoda melanoleuca]
Length = 4351
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+ +Y F V
Sbjct: 2818 VIQVTANDQDTGNDGQVSYRLPVDPGSNIHELFAIDSETGWITTLQELDCETHQTYHFYV 2877
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2878 VAYDHGRTIQ 2887
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D N+ + Y+L ++ HF + GE+ +A+ LD+E +Y + A
Sbjct: 3342 VLTVSATDEDGPANSAITYSLIGG-NQLGHFSVHPKKGELQVAKALDWEQTPTYSLRLRA 3400
Query: 61 TDRGK 65
TD G+
Sbjct: 3401 TDNGR 3405
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGQNRDVSYQIVEDGSDISKFFQINGSTGEMSTVQELDYETQQHFHVKVR 2350
Query: 60 ATDRG 64
A DRG
Sbjct: 2351 AMDRG 2355
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V+Y+L + +R F + ++ G I +AQ LD + + Y V A
Sbjct: 1574 LLQVRAMDGDRGANAEVHYSLLKG-NREGFFNINALLGIITLAQKLDQANHARYSLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN V Y E + +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDQDLGVNGAVTYAFAEDYA---YFRIDPYLGDISLKKPFDYKALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F++ ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDEGPAGEVRYVLLDDAHGT--FHVDLMTGALSLERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G N+ YT +R+ F + SG + +A L+ R YE V+A D
Sbjct: 169 KVTATDADLGQNSKFYYTFN---TRSEMFAIHPTSGVVTLAGKLNVTWRGRYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + ASD D G N+++ Y + E P F + G + I ++D+ES S++F V
Sbjct: 1785 LVIRASDSDEGANSLLVYEILE-PEALKFFKIDPSMGTLIIISEMDYESMPSFQFSVYVH 1843
Query: 62 DRG 64
D+G
Sbjct: 1844 DQG 1846
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +GE+ LD E + +Y A
Sbjct: 3032 ILKVSATDLDSDTNAQITYSL-HGPG-ADEFKLDPHTGELTTLTPLDREKKDTYSLVAKA 3089
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3090 TDGGGQS 3096
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF +++ +G I + + L + + E V A+D
Sbjct: 3137 VLARDPDQGTNAQVVYSLTDSAE--GHFSIEATTGVIRLEKPLRVRPQEALELTVRASDL 3194
Query: 64 G 64
G
Sbjct: 3195 G 3195
>gi|395817804|ref|XP_003804088.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B1-like
[Otolemur garnettii]
Length = 854
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+LRV A+D D G+NA + Y +SP+ T+ F + S +G+I LDFE S Y V
Sbjct: 261 VLRVMATDKDEGINAEITYAFLKSPTSTSLVFNLDSNTGDITTNGTLDFEETSQYVLGVE 320
Query: 60 ATDRGKET 67
A D G T
Sbjct: 321 AKDGGVHT 328
>gi|410915828|ref|XP_003971389.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
Length = 3314
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A DPD G N V+Y+L S +R F + V+GE+ A L + RS Y F V A D
Sbjct: 1240 VTAKDPDEGENGTVHYSL--SGARAERFTLNPVTGELKTAFPLSWGERSEYTFMVTAADH 1297
Query: 64 G 64
G
Sbjct: 1298 G 1298
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RVSA+D D G+NA + Y L + HF + S +GE+ LD E +SSY+ VV D
Sbjct: 1132 RVSATDRDAGLNARLTYRLLHT---DRHFQINSQTGEVSTRLALDREQQSSYQLVVVVQD 1188
Query: 63 RG 64
G
Sbjct: 1189 GG 1190
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A D D G N V Y L +S S ++ F + V+G I A LDFES + VV
Sbjct: 491 VLQVTARDKDQGPNGDVRYRLLKSKNSHSDWFSIDPVTGIITTATVLDFESEPAPSVTVV 550
Query: 60 ATDRGK 65
A D G+
Sbjct: 551 AMDNGR 556
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
R+S +DPD G A VN +L + S+ I + Q+LD E R SYE V+ATD
Sbjct: 387 RISVTDPDYGEYANVNVSLEGGDGKFALKTKDSIIYLIYVDQELDREERDSYELRVMATD 446
Query: 63 RG 64
G
Sbjct: 447 SG 448
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R++A+DPD NA V YT+ S N F + +G + + + LD E ++++ + A
Sbjct: 2622 IIRLTATDPDSTPNAEVQYTI-SSGDEVNLFTIDQWTGALRLQRTLDREHQATHSVIIQA 2680
Query: 61 TD 62
TD
Sbjct: 2681 TD 2682
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+DPD G + Y + + F++ +G + ++ LD E+R+ + VVATDR
Sbjct: 1783 LKATDPDSGAGGELEYRI-TAGDPDGDFHLHPSTGALSTSRGLDRETRAEHILEVVATDR 1841
Query: 64 G 64
G
Sbjct: 1842 G 1842
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y++ +S + F + V+G I A +D E + + V A
Sbjct: 2195 IIQVVAEDVDQGQNGQVTYSI-QSSGMSGLFKIDPVTGSITTAAIMDREIFTQTKLVVTA 2253
Query: 61 TDRG 64
TDRG
Sbjct: 2254 TDRG 2257
>gi|301621394|ref|XP_002940040.1| PREDICTED: hypothetical protein LOC100489805 [Xenopus (Silurana)
tropicalis]
Length = 5636
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH---FYMKSVSGEICIAQDLDFESRSSYEFP 57
+L V+A+D D G NA + Y+ ++ H F + ++GEI Q LDFE +YE
Sbjct: 3513 VLHVNATDRDEGTNAQITYSFIKTSENDIHSPMFSINQINGEIKTLQKLDFELTRNYEMS 3572
Query: 58 VVATDRG 64
V ATD G
Sbjct: 3573 VQATDGG 3579
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFP 57
+LRV+ASD D G NA + Y+ + + H M S+ SGEI L+FE++ YE
Sbjct: 5044 VLRVNASDMDEGTNAQITYSFSRTSVNSLHASMFSINPTSGEITTNNLLNFEAKKDYEIS 5103
Query: 58 VVATDRG 64
V A D G
Sbjct: 5104 VQAKDGG 5110
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFP 57
+LRV+ASD D G NA + Y+ + + H M S+ SGEI L++E++ YE
Sbjct: 4688 VLRVNASDMDEGTNAQITYSFSRTSENSLHASMFSINPTSGEIKTNNLLNYEAKKDYEIS 4747
Query: 58 VVATDRG 64
V A D G
Sbjct: 4748 VQAKDGG 4754
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFP 57
+L V+A+D D G NA + Y+ ++ H M S+ SGEI Q+ +FE++ YE
Sbjct: 1112 VLTVNATDRDEGTNAQIMYSFSKTSGNNLHTSMFSINYTSGEIKTKQNFNFEAKKFYEIS 1171
Query: 58 VVATDRG 64
V A D G
Sbjct: 1172 VQAKDGG 1178
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFP 57
+L V+A+D D G NA + Y+ ++ H M S+ SGEI Q+ +FE++ YE
Sbjct: 1923 VLTVNATDRDEGTNAQIMYSFSKTSGNNLHTSMFSINYTSGEIKTKQNFNFEAKKFYEIS 1982
Query: 58 VVATDRG 64
V A D G
Sbjct: 1983 VQAKDGG 1989
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH---FYMKSVSGEICIAQDLDFESRSSYEFP 57
+L V+A+D D G+NA + Y+ ++ + H F + ++GEI +L+FE YE
Sbjct: 266 VLYVNATDKDEGINAQIVYSFSKTSENSFHASMFSINPINGEIKTKGNLNFEEARHYEML 325
Query: 58 VVATDRG 64
V A D G
Sbjct: 326 VQAKDGG 332
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-----MKSVSGEICIAQDLDFESRSSYE 55
++ ++A+D D G NA + Y++ S + N+FY + V GEI I L+FE+ YE
Sbjct: 2738 VIILTATDKDEGTNAQITYSI--SKTSENNFYTSVFNINPVMGEITIKGSLNFEATEHYE 2795
Query: 56 FPVVATDRG 64
V A D G
Sbjct: 2796 MSVQAEDGG 2804
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFP 57
+LRV+ASD D G NA + Y+ + + H M S+ SGEI L++E+ YE
Sbjct: 3968 VLRVNASDMDEGTNAQITYSFSRTSVNSLHASMFSINPTSGEIKTNNLLNYEAIRDYEIS 4027
Query: 58 VVATDRG 64
V A D G
Sbjct: 4028 VQAKDGG 4034
>gi|167538373|ref|XP_001750851.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770672|gb|EDQ84355.1| predicted protein [Monosiga brevicollis MX1]
Length = 10056
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ V ASD D G ++YT+ +P+ T F + + SGE+ + Q + + ++S+ F ++A
Sbjct: 3072 LATVRASDEDTGAFGKLSYTMEVAPNATVPFSLDAASGELTLVQQVRYHEQASFSFHILA 3131
Query: 61 TDRGKET 67
+D G+ T
Sbjct: 3132 SDGGQRT 3138
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A DPD G N V+Y+L P F + + +G + + LD+E++ S+EF V ATD
Sbjct: 7473 QLVAFDPDAGANGTVSYSL--LPDNLTAFSIDATTGRLRVNASLDYETQQSFEFTVRATD 7530
Query: 63 RG 64
G
Sbjct: 7531 AG 7532
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +V A+D D G NA+++Y+L + F + + +G++ +A LD E+R +YE V A
Sbjct: 7896 VFQVVATDADLGSNALLHYSLLPG-NGAESFTLDAQTGQLFVASPLDREARDAYELVVRA 7954
Query: 61 TDRGK 65
D G
Sbjct: 7955 RDHGS 7959
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPS--RTNHFYMKSVSGEICIAQ-DLDFESRSSYEFPVVA 60
V A+D D GVNA +++ L + + R + F + + +GE+ + LD+E+ ++YE +
Sbjct: 8877 VQATDADTGVNAALSFALAPNTTRGRAHPFVVDATTGEVSLGPGGLDYETFNAYELLLSV 8936
Query: 61 TDRG 64
TD G
Sbjct: 8937 TDGG 8940
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFE--SRSSYEFPV 58
++ +A DPD G + Y + HF + + + + DLDFE + SSY +
Sbjct: 7041 LINATAVDPDAGAAGRITYAIEGMDVAAQHFAFSATTATLVVRDDLDFERLNVSSYTLEI 7100
Query: 59 VATD 62
+A D
Sbjct: 7101 IARD 7104
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 7 SDPDCGVNAMVNYTLGESPSRTNHFYMKS-VSG-EICIAQDLDFESRSSYEFPVVATDRG 64
SD D G NA + Y++ S + S SG ++ A LDFE+++SY +VATD G
Sbjct: 3585 SDADAGRNAALTYSINGSDNLPFRVQASSNASGVDLLTAGALDFETQASYNLTIVATDAG 3644
Query: 65 K 65
Sbjct: 3645 A 3645
>gi|354501665|ref|XP_003512910.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Cricetulus
griseus]
Length = 3070
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV+A DPD G N V Y+L + T+ F + SG I A LD+E + V+A
Sbjct: 488 VVRVTAQDPDQGTNGQVTYSLAPG-THTHWFSIDPTSGIITTAATLDYELEPQPQLIVLA 546
Query: 61 TDRG 64
TD G
Sbjct: 547 TDGG 550
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L V A DPD G A V+Y L HF + + +G + + + LD E R+ + VVA
Sbjct: 1337 LHVVARDPDLGEAARVSYRLAAG--GHGHFRLHATTGALSVVRPLDREQRAEHVLTVVAL 1394
Query: 62 DRG 64
D G
Sbjct: 1395 DHG 1397
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A DPD G N V Y LG F ++ SGE+ A LD E +SY F V A
Sbjct: 1646 LLQLQAHDPDDGDNGRVMYYLGAG--TAGAFLLEPTSGELRTATALDREHCASYAFSVNA 1703
Query: 61 TD 62
D
Sbjct: 1704 VD 1705
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 3 RVSASDPDCGVNAMVNYTL--GESPSRTNHFYMK---SVSGEICIAQDLDFESRSSYEFP 57
R+S SDPD G A VN +L GE HF + SV +C+A+ LD E R Y
Sbjct: 383 RISVSDPDDGDFAHVNVSLEGGE-----GHFALSTQDSVIYLVCVARRLDREERDVYNLR 437
Query: 58 VVATDRG 64
V ATD G
Sbjct: 438 VTATDSG 444
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN-HFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D G N V Y + S + F + S +G + + + LDFE R +E V
Sbjct: 270 VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDSHTGLLRLERPLDFEQRRVHELVVQ 329
Query: 60 ATDRGKETQ 68
A D G +
Sbjct: 330 ARDGGAHPE 338
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDF-ESRSSYEFP 57
L+V+A+D D G +++Y+LG S + F + + SG++C + LD + SS++F
Sbjct: 593 FLQVTATDADSGSFGLLSYSLGAGIGASGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFT 652
Query: 58 VVATDRG 64
V A D G
Sbjct: 653 VTAIDGG 659
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+D D G N + Y+L + + F + +GE+ Q LD E +SS++ V D
Sbjct: 1122 RVFATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEVTTLQSLDREHQSSFQLLVHVQD 1181
Query: 63 RG 64
G
Sbjct: 1182 SG 1183
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V ASD D G + +V +TL S F + SG + +A LD E+++ ++ V A
Sbjct: 2393 LLHVEASDADPGPHGLVRFTL-SSGDPLGLFELDENSGALRLAHPLDCETQARHQLVVQA 2451
Query: 61 TD 62
D
Sbjct: 2452 AD 2453
>gi|334331086|ref|XP_003341441.1| PREDICTED: protocadherin-23-like [Monodelphis domestica]
Length = 3395
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L +SA D D G+N V Y+L + F + ++G + +AQ LD E+RS Y F VVA
Sbjct: 1975 ILELSAVDEDIGLNGQVEYSL--TGDVLGIFTIDRMAGTLKLAQSLDRETRSQYVFRVVA 2032
Query: 61 TDRGKET 67
+DR ++
Sbjct: 2033 SDRSVQS 2039
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D +N + Y++ S ++ F + +VSG I LD+E SSY V A
Sbjct: 2284 IIQVFAADLDSDLNGQIEYSI-LSGNQDEAFQIDAVSGVIATNTILDYELTSSYSLVVQA 2342
Query: 61 TDRG 64
D+G
Sbjct: 2343 ADKG 2346
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 3 RVSASDPDCGVNAMVNYTL-------GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
RV A+D D G N V Y+L G S F ++ +SG + + + LD E+++ Y
Sbjct: 347 RVHATDLDLGSNGQVRYSLRARQPSTGGFDSEGAFFSVEELSGVVRVRRPLDREAQARYR 406
Query: 56 FPVVATDRGKETQ 68
V A D G E +
Sbjct: 407 LVVEALDGGAEPE 419
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A D D G+N+ + + + + +++ F + S SGE+ A LD E++ + V+ D
Sbjct: 1768 KVEAVDRDSGINSQLQFEIMPT-AKSGLFKINSSSGEVITAATLDRETQEIFTLRVLVKD 1826
Query: 63 RG 64
+G
Sbjct: 1827 QG 1828
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE---SPSRTNHFYMKSVSGEICIAQDLDFESRS-SYEF 56
L+V ASD D G + Y L + S ++ F + +G IC++QD+D E +Y+
Sbjct: 706 FLQVKASDADTGRYGHIEYLLYDGFHSSEQSQAFQIDPHTGHICVSQDIDRERDPVTYDL 765
Query: 57 PVVATDRG 64
V A D G
Sbjct: 766 LVKAQDGG 773
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G N+ V YT+ R +F + +G I + + LD+E + V A
Sbjct: 2709 IVVVSAKDQDIGANSEVVYTIISGNER-GYFCIDGETGAIDLMKPLDYEDTIMFTLTVQA 2767
Query: 61 TDRGKE 66
++RG +
Sbjct: 2768 SNRGTD 2773
>gi|270014310|gb|EFA10758.1| starry night [Tribolium castaneum]
Length = 3257
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G+N ++Y+L E F + SG I + LD ES + YE A
Sbjct: 965 VVQVSATDADVGLNGKISYSLSEKDKEDGSFVIDPTSGVIRTNKGLDRESVAVYELEAYA 1024
Query: 61 TDRGKET 67
DRG T
Sbjct: 1025 IDRGSPT 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G+NA + Y+LGE F + +G I + LD E+ S Y V A
Sbjct: 859 VLVVSATDNDVGLNAQITYSLGEDGDHPAEFTINPQTGAIITTRTLDRETTSGYLLTVTA 918
Query: 61 TDRG 64
D G
Sbjct: 919 RDGG 922
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS---RTNHFYMK--SVSGEICIAQDLDFESRSSYE 55
+++V A D D G NA + YT+ S T F + S +G I ++LD E +S +
Sbjct: 645 IVKVQAYDADEGPNADIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTKELDREDQSKFM 704
Query: 56 FPVVATDRGKETQ 68
F V+ATD+G Q
Sbjct: 705 FQVIATDQGTPPQ 717
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+D D G NA + Y + +++ F + S++G++ + + LD+E+ SY + A
Sbjct: 540 IAHIKATDADQGNNAAIRYAIISGNTQS-QFAIDSLTGDVSLVKPLDYETLRSYRLVIRA 598
Query: 61 TDRG 64
D G
Sbjct: 599 QDGG 602
>gi|229442269|gb|AAI72777.1| FAT tumor suppressor 2 precursor [synthetic construct]
Length = 866
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 587 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 646
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 647 VAYDHGQTIQ 656
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 62 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 121
Query: 60 ATDRG 64
A D+G
Sbjct: 122 AMDKG 126
>gi|118763759|gb|AAI28738.1| Pcdh8 protein [Rattus norvegicus]
Length = 694
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|91090474|ref|XP_968232.1| PREDICTED: similar to cadherin [Tribolium castaneum]
Length = 3246
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G+N ++Y+L E F + SG I + LD ES + YE A
Sbjct: 965 VVQVSATDADVGLNGKISYSLSEKDKEDGSFVIDPTSGVIRTNKGLDRESVAVYELEAYA 1024
Query: 61 TDRGKET 67
DRG T
Sbjct: 1025 IDRGSPT 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G+NA + Y+LGE F + +G I + LD E+ S Y V A
Sbjct: 859 VLVVSATDNDVGLNAQITYSLGEDGDHPAEFTINPQTGAIITTRTLDRETTSGYLLTVTA 918
Query: 61 TDRG 64
D G
Sbjct: 919 RDGG 922
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS---RTNHFYMK--SVSGEICIAQDLDFESRSSYE 55
+++V A D D G NA + YT+ S T F + S +G I ++LD E +S +
Sbjct: 645 IVKVQAYDADEGPNADIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTKELDREDQSKFM 704
Query: 56 FPVVATDRGKETQ 68
F V+ATD+G Q
Sbjct: 705 FQVIATDQGTPPQ 717
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+D D G NA + Y + +++ F + S++G++ + + LD+E+ SY + A
Sbjct: 540 IAHIKATDADQGNNAAIRYAIISGNTQS-QFAIDSLTGDVSLVKPLDYETLRSYRLVIRA 598
Query: 61 TDRG 64
D G
Sbjct: 599 QDGG 602
>gi|345307957|ref|XP_001508966.2| PREDICTED: protocadherin Fat 2 [Ornithorhynchus anatinus]
Length = 4144
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V+A+D D G + V Y+L ES F + SG I ++LD E+R +Y+F VV
Sbjct: 2812 VIQVTANDQDTGSDGQVTYSLAAESDWVGELFAIDRESGWITTRKELDCEARETYQFHVV 2871
Query: 60 ATDRGKETQ 68
A+D G+ Q
Sbjct: 2872 ASDHGRTIQ 2880
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L ++A D D +N+ V Y+L G P HF + GEI +A+ LD+E SY V
Sbjct: 3335 ILTLTAVDEDGPMNSNVTYSLVGGDPQ--GHFAIHPKRGEIHVARPLDWEETPSYHLTVR 3392
Query: 60 ATDRGK 65
ATD G+
Sbjct: 3393 ATDNGQ 3398
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D GVNA V Y+L P + F + +GE+ LD E + Y A
Sbjct: 3025 ILQVSAVDADAGVNAQVTYSL-HGPG-ADEFRLDPYTGELFTLTALDREEKDRYHLVAKA 3082
Query: 61 TDRG 64
TD G
Sbjct: 3083 TDGG 3086
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A DPD G V Y L ++ T F + +G + + ++L+FE+R+ Y V A
Sbjct: 939 VLFLEAFDPDAGPGGEVKYALVDNAQGT--FQVDKWTGAVTLERELNFETRALYNLTVEA 996
Query: 61 TDRGK 65
+D GK
Sbjct: 997 SDGGK 1001
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++R+ A+D D G N V+Y + E S + F+ + +G++ A++LD+E R + V
Sbjct: 2286 VIRLLAADRDSGRNGAVSYQIVEDGSDASEFFQVDGRTGQMATARELDYELRRQFRVKVS 2345
Query: 60 ATDRGK 65
A D G+
Sbjct: 2346 AADDGE 2351
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + LD+ + + Y V+A
Sbjct: 2084 VFQVSATDRDLGANGTVTYGFAED---YQYFRIDPYLGDISLRKPLDYRALNKYLLKVIA 2140
Query: 61 TDRG 64
D G
Sbjct: 2141 RDGG 2144
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L V A+D D NA++ Y + E P +F + G + + ++D+E SS+ F V
Sbjct: 1780 LVVRATDADQDANALLVYEIRE-PEALKYFAIDESMGTLTMVAEVDYEQTSSFHFSVHVR 1838
Query: 62 DRG 64
D+G
Sbjct: 1839 DQG 1841
>gi|157108475|ref|XP_001650242.1| protocadherin [Aedes aegypti]
gi|108884002|gb|EAT48227.1| AAEL000717-PA [Aedes aegypti]
Length = 605
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D G N MV Y + S + F + +G I + + LDFE++ +E VV
Sbjct: 275 VLQVYATDQDAGENGMVEYAINRRQSDKDQMFRIDPNTGLISVNKPLDFETKELHELVVV 334
Query: 60 ATDRGKE 66
A DRG +
Sbjct: 335 AKDRGLQ 341
>gi|395504776|ref|XP_003756723.1| PREDICTED: protocadherin gamma-A11-like [Sarcophilus harrisii]
Length = 810
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV+A+D D G+N V Y+ ++ R +N F++ S GEI I Q LD+E YE +
Sbjct: 262 LLRVNATDRDEGINGEVTYSF-QNLKRPVSNIFHLDSHKGEILIKQSLDYEKAKLYELEI 320
Query: 59 VATD 62
A D
Sbjct: 321 QAND 324
>gi|354498516|ref|XP_003511361.1| PREDICTED: protocadherin-8-like [Cricetulus griseus]
Length = 872
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|431892532|gb|ELK02965.1| Protocadherin-12 [Pteropus alecto]
Length = 1198
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D GVN ++Y + +SP + + S +GE+ + LD+E + +EF V+A
Sbjct: 479 LITIRARDADLGVNGQISYRIQDSPV-SYLVAIDSDTGEVTAQRSLDYEQMAGFEFQVIA 537
Query: 61 TDRGK 65
DRG+
Sbjct: 538 EDRGQ 542
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G N V + L + P + F + + +G++ + Q LD+E +YE V
Sbjct: 263 LINLTATDPDQGPNGEVEFFLSKHVPPEVLDTFSIDAKTGQVILRQPLDYEKNPAYEVDV 322
Query: 59 VATDRG 64
A D G
Sbjct: 323 QARDLG 328
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD G N + +Y+L SPS HF + + G E+ + ++LD E S ++ +
Sbjct: 159 ALDPDTGPNTLDSYSL--SPSE--HFALDVIVGPDETKHAELVVVKELDREIHSFFDLVL 214
Query: 59 VATDRG 64
A DRG
Sbjct: 215 TAYDRG 220
>gi|344257579|gb|EGW13683.1| Protocadherin-16 [Cricetulus griseus]
Length = 3015
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV+A DPD G N V Y+L + T+ F + SG I A LD+E + V+A
Sbjct: 488 VVRVTAQDPDQGTNGQVTYSLAPG-THTHWFSIDPTSGIITTAATLDYELEPQPQLIVLA 546
Query: 61 TDRG 64
TD G
Sbjct: 547 TDGG 550
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A DPD G N V Y LG F ++ SGE+ A LD E +SY F V A
Sbjct: 1591 LLQLQAHDPDDGDNGRVMYYLGAG--TAGAFLLEPTSGELRTATALDREHCASYAFSVNA 1648
Query: 61 TD 62
D
Sbjct: 1649 VD 1650
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 3 RVSASDPDCGVNAMVNYTL--GESPSRTNHFYMK---SVSGEICIAQDLDFESRSSYEFP 57
R+S SDPD G A VN +L GE HF + SV +C+A+ LD E R Y
Sbjct: 383 RISVSDPDDGDFAHVNVSLEGGE-----GHFALSTQDSVIYLVCVARRLDREERDVYNLR 437
Query: 58 VVATDRG 64
V ATD G
Sbjct: 438 VTATDSG 444
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN-HFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D G N V Y + S + F + S +G + + + LDFE R +E V
Sbjct: 270 VLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDSHTGLLRLERPLDFEQRRVHELVVQ 329
Query: 60 ATDRGKETQ 68
A D G +
Sbjct: 330 ARDGGAHPE 338
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A+D D G N + Y+L + + F + +GE+ Q LD E +SS++ V D
Sbjct: 1122 RVFATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEVTTLQSLDREHQSSFQLLVHVQD 1181
Query: 63 RG 64
G
Sbjct: 1182 SG 1183
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDF-ESRSSYEFP 57
L+V+A+D D G +++Y+LG S + F + + SG++C + LD + SS++F
Sbjct: 593 FLQVTATDADSGSFGLLSYSLGAGIGASGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFT 652
Query: 58 VVATDRG 64
V A D G
Sbjct: 653 VTAIDGG 659
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V ASD D G + +V +TL S F + SG + +A LD E+++ ++ V A
Sbjct: 2338 LLHVEASDADPGPHGLVRFTL-SSGDPLGLFELDENSGALRLAHPLDCETQARHQLVVQA 2396
Query: 61 TD 62
D
Sbjct: 2397 AD 2398
>gi|328791786|ref|XP_393497.4| PREDICTED: cadherin-related tumor suppressor [Apis mellifera]
Length = 4958
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N M+ Y + + N F++ S++G + I + LD++ Y+ + A
Sbjct: 3122 ILTVSATDGDEGPNGMIRYKISAG-NEKNEFFVHSITGAVTILEPLDYDLVQEYKLNITA 3180
Query: 61 TDRG 64
TD G
Sbjct: 3181 TDLG 3184
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV +D D G+N V Y+L E ++ F + +G+I + ++LD E+ SY VVA
Sbjct: 1202 LLRVYTTDADEGLNGDVFYSL-EDGNQYGRFAIDEATGQISLTKELDRETMDSYVLTVVA 1260
Query: 61 TDRGKETQ 68
D G ET+
Sbjct: 1261 HDAGLETR 1268
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+++SD D G NA V+Y E+P + F M ++SG + + LD E + Y +VA
Sbjct: 2801 VIRITSSDLDIGQNANVSYRFTENPGQ--KFAMDALSGNVTVNGHLDREEQDEYLLKLVA 2858
Query: 61 TD 62
D
Sbjct: 2859 AD 2860
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+VSA D D G N V+Y L + T F + S +GEI LD E +SYE + A D
Sbjct: 2700 KVSAKDRDSGENGQVSYYLVNDFTET--FVIDSDNGEISTNAKLDREEIASYELIIEARD 2757
Query: 63 RGK 65
G+
Sbjct: 2758 EGQ 2760
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A D D G N V Y+L ++ T F + V G + ++ LD E RS+Y V A
Sbjct: 2066 VMAIKAVDRDEGRNGYVEYSLEDT---TLPFTVGPVDGLLRVSGSLDRELRSNYTLEVTA 2122
Query: 61 TDRGK 65
DRG+
Sbjct: 2123 KDRGE 2127
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR A+D D G N+ + + + +R + FY+ ++G + + + LD+E Y V
Sbjct: 1308 LLRFEATDNDLGPNSELAFAISAG-NRRDTFYIDPLTGTLYLRKPLDYEELEKYTLNVTC 1366
Query: 61 TDRG 64
+D G
Sbjct: 1367 SDGG 1370
>gi|432099003|gb|ELK28485.1| Protocadherin Fat 1 [Myotis davidii]
Length = 1119
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 946 VMWLEAYDPDLGQSSQVRYSLMDHGEG-----HFDVDKLSGAVRIVQQLDFERKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDHAETPLYEIEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 VDRG 228
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + + Q LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGQVTYSI---LTDTDQFSIDSVTGVVKVVQPLDPEVQPVHYLKIEA 897
Query: 61 TDRGKE 66
D+ E
Sbjct: 898 RDQATE 903
>gi|80751169|ref|NP_001032216.1| protocadherin gamma-A2 precursor [Rattus norvegicus]
gi|50512398|gb|AAT77594.1| protocadherin gamma a2 [Rattus norvegicus]
gi|149017316|gb|EDL76367.1| rCG49295, isoform CRA_c [Rattus norvegicus]
Length = 931
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G NA V Y L P T+ F +KS SG+I I + LD+E +E +
Sbjct: 261 ILTVTATDTDEGYNAQVTYFLERVPGESTDAFELKSTSGDITITKSLDYEKAKFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|119582382|gb|EAW61978.1| protocadherin beta 6 [Homo sapiens]
Length = 794
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G+NA V Y+L P + H + S+ +G + + LD+E+ S+EF
Sbjct: 471 VSATDRDSGINAQVTYSL--LPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFR 528
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 529 VGATDRG 535
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G V+Y L + F + +++GEI + + LDFE SY+ V A
Sbjct: 260 VITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFEEIQSYDVDVEA 319
Query: 61 TDRG 64
TD G
Sbjct: 320 TDGG 323
>gi|444721940|gb|ELW62647.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2300
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + Y L +P N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2028 VFKAQATDPDSGPNSYIEYPL-LTP-LGNKFSIGTIDGEVRLTGELDREEVSTYSLTVVA 2085
Query: 61 TDRGK 65
TD+G+
Sbjct: 2086 TDKGQ 2090
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y+L S + F + + SG I LD E +++Y+ +VATD
Sbjct: 672 VSATDPDLGPNGTVKYSL--SAGDRSRFQVNAQSGVISTKMALDREEKTAYQLQIVATDG 729
Query: 64 GK 65
G
Sbjct: 730 GN 731
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 230 VLQVAAADADEGTNADIRYRLQDEGT---PFQMDPETGLITVREPLDFEARRQYSLTVQA 286
Query: 61 TDRG 64
DRG
Sbjct: 287 MDRG 290
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y + E + F + SV+G I +A+ LD E +Y V A
Sbjct: 2132 IIQVLAADGDEGTNGQVRYGIVEG-NANQEFRIDSVTGTITVAKPLDREKTPTYLLTVQA 2190
Query: 61 TDRG 64
TDRG
Sbjct: 2191 TDRG 2194
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1400 VISVTAHDPDADINGQLSYTIIQQMPRGNHFGIDQVKGTIYTNAEIDREFANLFELTVKA 1459
Query: 61 TDRG 64
D+
Sbjct: 1460 NDQA 1463
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1190 VLRVSASDVDEGSNGLIHYSVIKG-NEERQFAIDSNSGQVTLIGTLDYEATPAYSLVIQA 1248
Query: 61 TDRG 64
D G
Sbjct: 1249 VDSG 1252
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1298 VTATDSDSGDNADLQYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1354
Query: 62 DRGK 65
D+G+
Sbjct: 1355 DKGR 1358
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 563 LLVLRATDGDLGDNGTVRFSLQEAEADQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 622
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 623 TDLGSPPQ 630
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD SY+ ++A
Sbjct: 873 IFQAKAVDPDEGVNGMVLYSLRQNPK--NLFAINEKNGNISLLGPLDVHV-GSYQIEILA 929
Query: 61 TDRG 64
+D G
Sbjct: 930 SDMG 933
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L ++ ++ S +GE+ + Q LD E++ + + A
Sbjct: 2238 ILQVVARDDDQGSNSKLSYVL--LGGNEDNAFILSANGELSVTQSLDRETKERFVLVITA 2295
Query: 61 TDRGK 65
TD GK
Sbjct: 2296 TDSGK 2300
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N ++YT+ E T + G++ I +LD E + Y VVA
Sbjct: 976 FFQVQASDKDSGANGEISYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLVVVA 1033
Query: 61 TDRGKE 66
+DR E
Sbjct: 1034 SDRAVE 1039
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1720 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATKRLDRERRSKYSLLVRA 1777
Query: 61 TD 62
D
Sbjct: 1778 DD 1779
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1824 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTVRAEDG 1882
Query: 64 GKE 66
G +
Sbjct: 1883 GGQ 1885
>gi|426229938|ref|XP_004009040.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Ovis aries]
Length = 4343
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D VN+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3338 VLTVSATDEDGPVNSAITYSLIGG-NQLGHFAIHPKKGELQVAKALDWEQTSSYSLKLRA 3396
Query: 61 TDRGK 65
TD G+
Sbjct: 3397 TDSGQ 3401
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+ Y F V
Sbjct: 2814 VIQVTANDQDTGDDGQVSYRLPVDPGSNIHELFAIDSETGWITTLQELDCETNQIYHFYV 2873
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2874 VAYDHGRTIQ 2883
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F++ ++G + + ++LDFE R+ Y + A+D
Sbjct: 943 LDASDPDLGPAGEVQYVLLDDVHGT--FHVNPMTGALSLEKELDFERRAGYNLSLWASDS 1000
Query: 64 GK 65
GK
Sbjct: 1001 GK 1002
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2287 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2346
Query: 60 ATDRG 64
A DRG
Sbjct: 2347 AMDRG 2351
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2085 LFQVSATDQDLGVNGAVTYAFAED---YTYFRIDPYLGDISLRKPFDYQALNKYRLKVIA 2141
Query: 61 TDRG 64
D G
Sbjct: 2142 QDGG 2145
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+VSA+D D G NA Y +R+ F + SG + +A L+ R +E V+A D
Sbjct: 165 KVSATDADLGQNAEFYYAFN---TRSEMFAIHPASGVVTLAGKLNVTWRGKHELQVLAVD 221
Query: 63 RGKE 66
R ++
Sbjct: 222 RMRK 225
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF +++ +G I + + L +++ E V A+D
Sbjct: 3133 VLARDPDQGTNAQVVYSLTDSAE--GHFSIEATTGVIRLEKPLRVRPQAALELTVRASDL 3190
Query: 64 G 64
G
Sbjct: 3191 G 3191
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +GE+ LD E + +Y A
Sbjct: 3028 ILKVSATDLDSDTNAQITYSL-HGPG-ADEFKLDPHTGELTTLTALDREKKDAYSLVAKA 3085
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3086 TDGGGQS 3092
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V Y+ + S F + ++ G I +AQ LD + + Y V A
Sbjct: 1570 LLQVRAMDGDRGANAEVRYSFLKGNSE-GFFNINTLLGIITLAQKLDQANHARYTLTVKA 1628
Query: 61 TDRG 64
D+G
Sbjct: 1629 EDQG 1632
>gi|345781801|ref|XP_532835.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Canis lupus
familiaris]
Length = 4589
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAYDPDLGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQHLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R Y+ V
Sbjct: 2828 VIQIRASDLDSGTNGQVMYSLDQSQSVEVIESFAINMETGWISTLKELDHEKRDRYQIQV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKVQ 2897
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGTVVLTGRLDYAETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 VDRG 228
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD S+ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFTIDPVLGSIKTARELDRNSQVEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDQG 1643
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS +F + S +G I LD+E S++ F V
Sbjct: 1792 LVIRATDADKESNALLVYHIVE-PSIHKYFAIDSSTGAIHTVLSLDYEETSTFHFTVQVH 1850
Query: 62 DRG 64
D G
Sbjct: 1851 DMG 1853
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G I I + LD+ES Y V A
Sbjct: 3250 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAIFIIETLDYESSHEYYLTVEA 3308
Query: 61 TDRG 64
TD G
Sbjct: 3309 TDGG 3312
>gi|354490726|ref|XP_003507507.1| PREDICTED: protocadherin Fat 1-like [Cricetulus griseus]
gi|344246355|gb|EGW02459.1| Protocadherin Fat 1 [Cricetulus griseus]
Length = 4589
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S F + +G I ++LD E R+SY+ V
Sbjct: 2829 VIQIRASDLDSGTNGQVMYSLDQSQGADIIESFAINVETGWITTLKELDHEERASYQIKV 2888
Query: 59 VATDRGKETQ 68
+A+D G++ Q
Sbjct: 2889 IASDHGEKVQ 2898
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE HF + +SG + I Q LDFE + Y
Sbjct: 947 IMWLEAYDPDVGQSSQVRYSLLDHGEG-----HFDVDKLSGAVRIVQQLDFEKKQVYNLT 1001
Query: 58 VVATDRGK 65
+ A D+GK
Sbjct: 1002 IRAKDKGK 1009
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LDF YE ++A
Sbjct: 169 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVVVLTGRLDFLETQLYELEILA 225
Query: 61 TDRG 64
DRG
Sbjct: 226 VDRG 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD ++ Y+ V A
Sbjct: 1582 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFTIDPILGSIKTARELDRSNQVEYDLIVKA 1640
Query: 61 TDRG 64
TD+G
Sbjct: 1641 TDQG 1644
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L +S F + VSG I + + LD E ++ Y + A
Sbjct: 3145 LTRVQATDADAGLNRKISYSLIDSAD--GQFSISEVSGIIQLEKHLDREQQAVYTLTLKA 3202
Query: 61 TDRG 64
D+G
Sbjct: 3203 VDQG 3206
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F M S +G I I ++LD+ES Y V A
Sbjct: 3250 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSMDSKTGAIFIIENLDYESSHEYYLTVEA 3308
Query: 61 TDRG 64
TD G
Sbjct: 3309 TDGG 3312
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G + + Y++ + S F + V+G I + LD ES S Y V A
Sbjct: 1054 VMTVSAHDEDTGRDGEIRYSIRDG-SGVGVFRIDEVTGVIETSDRLDRESTSHYWLTVYA 1112
Query: 61 TDRG 64
TD+G
Sbjct: 1113 TDQG 1116
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D N V+Y + G +HF++ S +G I + + LD+E ++ V
Sbjct: 2303 VLQVKATDSDSEPNRGVSYQMFGNHSKSHDHFHIDSNTGLISLVRALDYEQFQQHKVFVR 2362
Query: 60 ATDRG 64
A D G
Sbjct: 2363 AVDGG 2367
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D NA + YTL S + F + +GE+ LD E ++ Y V A
Sbjct: 3043 VMQVSATDADIRSNAEITYTLFGSGAE--KFKLNPDTGELRTLAPLDREEQAVYNLLVKA 3100
Query: 61 TDRG 64
TD G
Sbjct: 3101 TDGG 3104
>gi|189069234|dbj|BAG36266.1| unnamed protein product [Homo sapiens]
Length = 794
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G+NA V Y+L P + H + S+ +G + + LD+E+ S+EF
Sbjct: 471 VSATDRDSGINAQVTYSL--LPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFR 528
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 529 VGATDRG 535
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G V+Y L + F + +++GEI + + LDFE SY+ V A
Sbjct: 260 VITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFEEIQSYDVDVEA 319
Query: 61 TDRG 64
TD G
Sbjct: 320 TDGG 323
>gi|149017317|gb|EDL76368.1| rCG49295, isoform CRA_d [Rattus norvegicus]
Length = 869
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G NA V Y L P T+ F +KS SG+I I + LD+E +E +
Sbjct: 261 ILTVTATDTDEGYNAQVTYFLERVPGESTDAFELKSTSGDITITKSLDYEKAKFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>gi|431896448|gb|ELK05860.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Pteropus alecto]
Length = 2652
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 199 ILRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 257
Query: 61 TDRGK 65
D G+
Sbjct: 258 QDGGR 262
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 723 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQAT 780
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 615 VLQISATDRDSGLNGRVFYTFQGGNDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYA 674
Query: 61 TDRG 64
D+G
Sbjct: 675 VDKG 678
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 26 SRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
SR+NHF+ + V+G + A++LD E++S++ F V D G
Sbjct: 7 SRSNHFFSLDPVTGAVTTAEELDRETKSTHVFRVTVQDHG 46
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 512 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 568
Query: 61 TDRG 64
D G
Sbjct: 569 RDNG 572
>gi|9256618|ref|NP_061762.1| protocadherin beta-6 precursor [Homo sapiens]
gi|13431374|sp|Q9Y5E3.1|PCDB6_HUMAN RecName: Full=Protocadherin beta-6; Short=PCDH-beta-6; Flags:
Precursor
gi|5457047|gb|AAD43760.1|AF152499_1 protocadherin beta 6 [Homo sapiens]
gi|14009467|gb|AAK51619.1|AF217752_1 protocadherin-beta6 [Homo sapiens]
gi|151554995|gb|AAI48407.1| Protocadherin beta 6 [synthetic construct]
gi|157170302|gb|AAI52976.1| Protocadherin beta 6 [synthetic construct]
gi|261857680|dbj|BAI45362.1| protocadherin beta 6 [synthetic construct]
Length = 794
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G+NA V Y+L P + H + S+ +G + + LD+E+ S+EF
Sbjct: 471 VSATDRDSGINAQVTYSL--LPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFR 528
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 529 VGATDRG 535
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G V+Y L + F + +++GEI + + LDFE SY+ V A
Sbjct: 260 VITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFEEIQSYDVDVEA 319
Query: 61 TDRG 64
TD G
Sbjct: 320 TDGG 323
>gi|332029981|gb|EGI69806.1| Protocadherin-like wing polarity protein stan [Acromyrmex
echinatior]
Length = 3164
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE---SPSRTNHF--YMKSVSGEICIAQDLDFESRSSYE 55
+LRV A D D G NA++ YT+G + + T +F +K+ +G I + LD E S Y+
Sbjct: 609 ILRVQAYDADEGNNALIKYTIGARDFTGASTENFPITVKAETGWIYTTKQLDREQCSKYQ 668
Query: 56 FPVVATDRGKETQ 68
F V+A D G+E +
Sbjct: 669 FTVIAADSGEEPK 681
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R+ A D D G NA V Y + ++ N F + S++G++ + + LD+ES SY+ + A
Sbjct: 504 IARIRAMDADAGANAAVRYAIIGGNTQ-NTFSIDSMNGDVTLVKPLDYESTRSYKIVIRA 562
Query: 61 TDRG 64
D G
Sbjct: 563 QDGG 566
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D +N V Y L + F + S +G I A+ LD ES + Y VA
Sbjct: 931 VLRVAATDADTDLNGRVRYGLEDDGD--GAFTIDSTTGIIRTAKILDRESVAYYTLKAVA 988
Query: 61 TDRG 64
TDRG
Sbjct: 989 TDRG 992
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L VSA+D D G NA + Y+L F + S +G I + LD ES SY V
Sbjct: 823 VLVVSATDADVGKNAQITYSLATDNGEQVITEFTINSQTGAITTTKALDRESVPSYLLTV 882
Query: 59 VATDRG 64
A D G
Sbjct: 883 TARDGG 888
>gi|296485147|tpg|DAA27262.1| TPA: FAT tumor suppressor homolog 2 [Bos taurus]
Length = 3159
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D VN+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 2150 VLTVSATDEDGPVNSAITYSLIGG-NQLGHFAIHPKKGELQVAKALDWEQTSSYSLKLRA 2208
Query: 61 TDRGK 65
TD G+
Sbjct: 2209 TDSGQ 2213
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+ Y F V
Sbjct: 1626 VIQVTANDQDTGDDGQVSYRLPVDPGSNIHELFAIDSETGWITTLQELDCETNQIYHFYV 1685
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 1686 VAYDHGRTIQ 1695
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 1099 VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 1158
Query: 60 ATDRG 64
A DRG
Sbjct: 1159 AMDRG 1163
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 897 LFQVSATDQDLGVNGAVTYAFAED---YTYFRIDPYLGDISLRKPFDYQALNKYRLKVIA 953
Query: 61 TDRG 64
D G
Sbjct: 954 QDGG 957
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF +++ +G I + + L +++ E V A+D
Sbjct: 1945 VLARDPDQGTNAQVVYSLTDSAE--GHFSIEATTGVIRLEKPLQVRPQAALELTVRASDL 2002
Query: 64 G 64
G
Sbjct: 2003 G 2003
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V+Y+ + S F + ++ G I +AQ LD + + Y V A
Sbjct: 382 LLQVRAMDGDRGANAEVHYSFLKGNSE-GFFNINALLGIITLAQKLDQANHARYTLTVKA 440
Query: 61 TDRG 64
D+G
Sbjct: 441 EDQG 444
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +G++ LD E + Y A
Sbjct: 1840 ILKVSATDLDSDTNAQITYSL-HGPG-ADEFKLDPHTGDLTTLTALDREKKDVYSLVAKA 1897
Query: 61 TDRGKET 67
TD G ++
Sbjct: 1898 TDGGGQS 1904
>gi|300796778|ref|NP_001179501.1| protocadherin Fat 2 precursor [Bos taurus]
Length = 4347
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D VN+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3338 VLTVSATDEDGPVNSAITYSLIGG-NQLGHFAIHPKKGELQVAKALDWEQTSSYSLKLRA 3396
Query: 61 TDRGK 65
TD G+
Sbjct: 3397 TDSGQ 3401
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+ Y F V
Sbjct: 2814 VIQVTANDQDTGDDGQVSYRLPVDPGSNIHELFAIDSETGWITTLQELDCETNQIYHFYV 2873
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2874 VAYDHGRTIQ 2883
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F++ ++G + + ++LDFE R+ Y + A+D
Sbjct: 943 LDASDPDLGPAGEVQYVLLDDAHGT--FHVNPMTGALSLEKELDFERRAGYNLSLWASDS 1000
Query: 64 GK 65
GK
Sbjct: 1001 GK 1002
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2287 VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2346
Query: 60 ATDRG 64
A DRG
Sbjct: 2347 AMDRG 2351
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2085 LFQVSATDQDLGVNGAVTYAFAED---YTYFRIDPYLGDISLRKPFDYQALNKYRLKVIA 2141
Query: 61 TDRG 64
D G
Sbjct: 2142 QDGG 2145
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF +++ +G I + + L +++ E V A+D
Sbjct: 3133 VLARDPDQGTNAQVVYSLTDSAE--GHFSIEATTGVIRLEKPLQVRPQAALELTVRASDL 3190
Query: 64 G 64
G
Sbjct: 3191 G 3191
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+VSA+D D G NA Y +R+ F + SG + +A L+ R +E V+A D
Sbjct: 165 KVSATDADLGQNAEFYYAFN---TRSEMFAIHPTSGVVTLAGKLNVTWRGKHELQVLAVD 221
Query: 63 RGKE 66
R ++
Sbjct: 222 RMRK 225
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V+Y+ + S F + ++ G I +AQ LD + + Y V A
Sbjct: 1570 LLQVRAMDGDRGANAEVHYSFLKGNSE-GFFNINALLGIITLAQKLDQANHARYTLTVKA 1628
Query: 61 TDRG 64
D+G
Sbjct: 1629 EDQG 1632
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +G++ LD E + Y A
Sbjct: 3028 ILKVSATDLDSDTNAQITYSL-HGPG-ADEFKLDPHTGDLTTLTALDREKKDVYSLVAKA 3085
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3086 TDGGGQS 3092
>gi|440904071|gb|ELR54637.1| Protocadherin Fat 2 [Bos grunniens mutus]
Length = 4347
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D VN+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3338 VLTVSATDEDGPVNSAITYSLIGG-NQLGHFAIHPKKGELQVAKALDWEQTSSYSLKLRA 3396
Query: 61 TDRGK 65
TD G+
Sbjct: 3397 TDSGQ 3401
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+ Y F V
Sbjct: 2814 VIQVTANDQDTGDDGQVSYRLPVGPGSNIHELFAIDSETGWITTLQELDCETNQIYHFYV 2873
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2874 VAYDHGRTIQ 2883
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F++ ++G + + ++LDFE R+ Y + A+D
Sbjct: 943 LDASDPDLGPAGEVQYVLLDDAHGT--FHVNPMTGALSLEKELDFERRAGYNLSLWASDS 1000
Query: 64 GK 65
GK
Sbjct: 1001 GK 1002
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2287 VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2346
Query: 60 ATDRG 64
A DRG
Sbjct: 2347 AMDRG 2351
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2085 LFQVSATDQDLGVNGAVTYAFAED---YTYFRIDPYLGDISLRKPFDYQALNKYRLKVIA 2141
Query: 61 TDRG 64
D G
Sbjct: 2142 QDGG 2145
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF +++ +G I + + L +++ E V A+D
Sbjct: 3133 VLARDPDQGTNAQVVYSLTDSAE--GHFSIEATTGVIRLEKPLQVRPQAALELTVRASDL 3190
Query: 64 G 64
G
Sbjct: 3191 G 3191
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+VSA+D D G NA Y +R+ F + SG + +A L+ R +E V+A D
Sbjct: 165 KVSATDADLGQNAEFYYAFN---TRSEMFAIHPTSGVVTLAGKLNVTWRGKHELQVLAVD 221
Query: 63 RGKE 66
R ++
Sbjct: 222 RMRK 225
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V+Y+ + S F + ++ G I +AQ LD + + Y V A
Sbjct: 1570 LLQVRAMDGDRGANAEVHYSFLKGNSE-GFFNINALLGIITLAQKLDQANHARYTLTVKA 1628
Query: 61 TDRG 64
D+G
Sbjct: 1629 EDQG 1632
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +G++ LD E + Y A
Sbjct: 3028 ILKVSATDLDSDTNAQITYSL-HGPG-ADEFKLDPHTGDLTTLTALDREKKDVYSLVAKA 3085
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3086 TDGGGQS 3092
>gi|402873140|ref|XP_003900444.1| PREDICTED: protocadherin Fat 2 [Papio anubis]
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLIGG-NQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDITLKKPFDYQALNKYRLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 QDGG 2149
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D GVNA V+Y+L + + F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRAMDADRGVNAEVHYSLLKG-NGEGFFNINALLGIITLAQKLDRANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKETNSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
>gi|332834285|ref|XP_507798.3| PREDICTED: protocadherin-15 [Pan troglodytes]
Length = 1765
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 725 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 780
>gi|158259103|dbj|BAF85510.1| unnamed protein product [Homo sapiens]
Length = 798
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++F
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFR 530
Query: 58 VVATDRG 64
V A+D G
Sbjct: 531 VGASDHG 537
>gi|149017344|gb|EDL76395.1| rCG49295, isoform CRA_ae [Rattus norvegicus]
Length = 933
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G+N V YT + S+ + F + S +GE+ + + LDFE YE +
Sbjct: 261 VLVVNATDPDEGINGEVMYTFRKMKSKASEIFQLNSQTGEVLVGKPLDFEKYRFYEMEIQ 320
Query: 60 ATDRG 64
D G
Sbjct: 321 GQDGG 325
>gi|449267132|gb|EMC78098.1| Protocadherin Fat 2 [Columba livia]
Length = 4375
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D +N + Y++ E + HF ++ SG+I IA+ LD E SY V A
Sbjct: 3343 ILTVSADDLDGAMNNQITYSIVEG-NPLGHFAIQPKSGQISIAKHLDREEIPSYSLTVRA 3401
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 3402 TDNGHPAQ 3409
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V+A+D D G + V Y+L ES + F + SG I ++LD E++ Y F VV
Sbjct: 2818 VIQVTANDQDTGNDGQVTYSLEAESGNLRGLFTIDGESGWITTLKELDCEAQEIYRFYVV 2877
Query: 60 ATDRGKETQ 68
ATD G++ Q
Sbjct: 2878 ATDHGRKVQ 2886
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N + Y+ E +F++ G+I + + LD+++ + Y V+A
Sbjct: 2090 LFQVSATDKDIGDNGAITYSFAED---YKYFWIDPYLGDISLKKPLDYQALNKYNLRVIA 2146
Query: 61 TDRGK 65
D+G+
Sbjct: 2147 KDKGE 2151
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+DPD G NA + Y+L P F + +GE+ + LD E + Y A
Sbjct: 3031 ILKISATDPDVGSNAQITYSL-HGPG-AEEFRLGPHTGELTTSAPLDREQKPMYHLVAKA 3088
Query: 61 TDRG 64
TD G
Sbjct: 3089 TDGG 3092
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNY-TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y L + T F + +G+I AQ LD+E + V
Sbjct: 2292 VVQLFASDKDSGRNKAVSYQILDDGSDATKFFNIDGSTGQITTAQALDYERNQQFRMKVR 2351
Query: 60 ATDRG 64
ATD G
Sbjct: 2352 ATDHG 2356
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A D D G NA V Y+L +S + HF ++ +G I + + L S++E V ATDR
Sbjct: 3136 VAARDLDEGPNAEVVYSLSDSAN--GHFSIEETTGVIRLEKPLKDSQHSAFELTVRATDR 3193
Query: 64 G 64
G
Sbjct: 3194 G 3194
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + DPD G V Y+L F+M ++G + + ++LD+E + SY V
Sbjct: 946 LLFLEVFDPDTGSGGEVRYSLISDEEMM--FHMDKLTGALRLEKELDYEKKDSYNLTVQV 1003
Query: 61 TDRGK 65
+D GK
Sbjct: 1004 SDGGK 1008
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G NA ++Y+L ++ + F + SG I +AQ LD + + V A
Sbjct: 1575 IMQVRALDQDQGANAEIHYSL-QAGNGEGFFSIDLYSGIITVAQKLDPSRQERFTLIVKA 1633
Query: 61 TDRG 64
D+G
Sbjct: 1634 EDQG 1637
>gi|73954163|ref|XP_536461.2| PREDICTED: protocadherin Fat 2 [Canis lupus familiaris]
Length = 4354
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S +G I Q+LD E+ +Y F V
Sbjct: 2821 VIQVTANDQDTGNDGQVSYRLPVDPGSNIHELFAIDSETGWITTLQELDCETHQTYRFYV 2880
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2881 VAYDHGRTIQ 2890
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3345 VLTVSATDEDGPANSAITYSLVGG-NQLGHFTVHPKKGELQVAKALDWEQTSSYSLRLRA 3403
Query: 61 TDRGK 65
TD G+
Sbjct: 3404 TDSGR 3408
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2294 VIQLLASDQDSGQNRDVSYEIVEDGSDISKFFQINGSTGEMSTVQELDYETQQHFHVKVR 2353
Query: 60 ATDRG 64
A DRG
Sbjct: 2354 AMDRG 2358
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V + L + T F++ ++G + + ++LDFE R+ Y + A+D
Sbjct: 950 LDASDPDIGPAGEVRFVLLDDAHGT--FHVDLMTGALSLERELDFERRAGYNLSLWASDS 1007
Query: 64 GK 65
G+
Sbjct: 1008 GR 1009
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D GVN + Y E +F + G+I + + D+++ + Y V A
Sbjct: 2092 LFQVSATDQDLGVNGAITYAFAED---YTYFRIDPYLGDISLKKPFDYQALNKYHLKVFA 2148
Query: 61 TDRG 64
D G
Sbjct: 2149 RDGG 2152
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA ++Y+L + S F + ++ G I +AQ LD + + Y V A
Sbjct: 1577 LLQVRAMDADRGANAEIHYSLLKGNSE-GFFNIDTLLGIITLAQKLDQANHARYSLTVKA 1635
Query: 61 TDRG 64
D+G
Sbjct: 1636 EDQG 1639
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF +++ +G I + + L + + E V A+D
Sbjct: 3140 VLARDPDQGANAQVVYSLTDSAE--GHFSIEATTGVIRLEKPLQIRPQEALELTVRASDL 3197
Query: 64 G 64
G
Sbjct: 3198 G 3198
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y R+ F + SG + +A L+ R YE V+A D
Sbjct: 172 KVTATDADLGPNAKFYYAFN---MRSEMFAIHPTSGVVTLAGKLNVTWRGRYELQVLAVD 228
Query: 63 RGKE 66
R ++
Sbjct: 229 RMRK 232
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +GE+ LD E + +Y A
Sbjct: 3035 ILKVSATDLDSDTNAQITYSL-HGPG-ADEFKLDPHTGELTTLTALDREKKDTYSLVAKA 3092
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3093 TDGGGQS 3099
>gi|395504722|ref|XP_003756696.1| PREDICTED: protocadherin alpha-2 [Sarcophilus harrisii]
Length = 805
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G+N+ + Y+ T H F + +GEI I +LD+E SYE +
Sbjct: 261 VIKLNASDADEGLNSEITYSFSSDVPLTVHNKFKIDPSTGEIRIKGELDYEEEKSYEIQI 320
Query: 59 VATDRG 64
+A D+G
Sbjct: 321 IAFDKG 326
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 6 ASDPDCGVNAMVNYTL-----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
ASDPD NA+++Y L GE P +++ + S SG++ Q LD E +F V A
Sbjct: 479 ASDPDALENALISYFLVEQQVGERP-LSSYVSVHSESGKVYALQPLDHEELELLQFQVSA 537
Query: 61 TDRG 64
D G
Sbjct: 538 RDAG 541
>gi|355750344|gb|EHH54682.1| hypothetical protein EGM_15570 [Macaca fascicularis]
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLVGG-NQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D GVNA V+Y+L + + F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRATDADRGVNAEVHYSLLKG-NGEGFFNINALLGIITLAQKLDRANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDITLKKPFDYQALNKYRLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKETNSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|355691768|gb|EHH26953.1| hypothetical protein EGK_17044 [Macaca mulatta]
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLVGG-NQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D GVNA V+Y+L + + F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRATDADRGVNAEVHYSLLKG-NGEGFFNINALLGIITLAQKLDRANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDITLKKPFDYQALNKYRLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKETNSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|344242797|gb|EGV98900.1| Protocadherin-8 [Cricetulus griseus]
Length = 865
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|32451623|gb|AAH54555.1| Protocadherin gamma subfamily A, 8 [Mus musculus]
Length = 932
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V ASDPD GVN V Y + + ++ F++ +GE+ +A++LD+E S YE +
Sbjct: 261 LLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHGNTGEMTVAKNLDYEECSLYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ ++A DPD NA V Y++ E + +++ + S +G + Q DFE +
Sbjct: 471 IFSLTAHDPDSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQL 530
Query: 57 PVVATDRG 64
V+ATD G
Sbjct: 531 LVIATDSG 538
>gi|89363040|ref|NP_001032230.1| protocadherin gamma-A11 [Rattus norvegicus]
gi|50512394|gb|AAT77592.1| protocadherin gamma a11 [Rattus norvegicus]
Length = 933
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G+N V YT + S+ + F + S +GE+ + + LDFE YE +
Sbjct: 261 VLVVNATDPDEGINGEVMYTFRKMKSKASEIFQLNSQTGEVLVGKPLDFEKYRFYEMEIQ 320
Query: 60 ATDRG 64
D G
Sbjct: 321 GQDGG 325
>gi|403285083|ref|XP_003933869.1| PREDICTED: protocadherin Fat 1 [Saimiri boliviensis boliviensis]
Length = 4589
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y L +S S F + + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDVDSGANGQVVYRLDQSQSTEVIESFAVHTETGWITTLKELDHEKRGNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAYDPDLGQSGQVRYSLVDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VKAKDKGK 1008
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD ++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRNNQVEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RVSA+D D G N Y+ + RT+ F + SG + + LDF YE ++A D
Sbjct: 170 RVSATDADIGTNGEFYYSFKD---RTDMFAIHPSSGVVVLTGRLDFLETRLYEMEILAVD 226
Query: 63 RG 64
RG
Sbjct: 227 RG 228
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKISYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D G
Sbjct: 3202 VDHG 3205
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 IMQVSATDADIRSNAEITYTLLGSGAE--KFKLNPDTGELKTSAPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A D D +N+ ++Y++ + +R + F + V G++ + + LD E+ S Y V A
Sbjct: 3354 VITVMADDADGPLNSHIHYSIIDG-NRGSSFTIDPVRGDVKVTKVLDRETISGYTLTVQA 3412
Query: 61 TDRG 64
+D G
Sbjct: 3413 SDNG 3416
>gi|397518008|ref|XP_003829192.1| PREDICTED: protocadherin beta-13-like [Pan paniscus]
Length = 798
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINAENGHLFALRSLDYEALQGFEFR 530
Query: 58 VVATDRG 64
V A+D G
Sbjct: 531 VGASDHG 537
>gi|326670102|ref|XP_001922712.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Danio
rerio]
Length = 3584
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR+SA+D D NA V+Y + SR F + SV+GEI + LDFE+ Y + A
Sbjct: 883 ILRISATDQDKDGNAAVHYNIISGNSR-GQFAIDSVTGEIQVVAPLDFETEREYTLRLRA 941
Query: 61 TDRGK 65
D G+
Sbjct: 942 QDNGR 946
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A+DPD G NA + Y + E + F M SGE+ DLD+E+R+ Y V AT
Sbjct: 1407 QITATDPDEGPNAQIMYQIVEG-NIPEIFQMDIFSGELTSLIDLDYETRNEYVIVVQAT 1464
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD ES YE A
Sbjct: 1299 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRESVPFYELTAFA 1358
Query: 61 TDRGKETQ 68
DRG Q
Sbjct: 1359 VDRGVPPQ 1366
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G NA + Y L ++ F + SG I + +LD+E + +Y + A D
Sbjct: 1199 ISATDDDVGENARITYYLEDN---IPQFRIDPASGAITLQAELDYEDQMTYTLAITARDN 1255
Query: 64 G 64
G
Sbjct: 1256 G 1256
>gi|195159447|ref|XP_002020590.1| GL15355 [Drosophila persimilis]
gi|194117540|gb|EDW39583.1| GL15355 [Drosophila persimilis]
Length = 1691
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ A+D D GVNA + Y+L F + S SG I LD E +SSY F V+A
Sbjct: 98 VVRIKATDADLGVNARLVYSLANETQW--QFAIDSKSGLITTVGKLDRELQSSYSFMVLA 155
Query: 61 TDRGK 65
TD G+
Sbjct: 156 TDGGR 160
>gi|14589946|ref|NP_116755.1| protocadherin-11 Y-linked isoform c [Homo sapiens]
gi|74762719|sp|Q9BZA8.1|PC11Y_HUMAN RecName: Full=Protocadherin-11 Y-linked; Short=Protocadherin-11;
AltName: Full=Protocadherin on the Y chromosome;
Short=PCDH-Y; AltName: Full=Protocadherin prostate
cancer; Short=Protocadherin-PC; AltName:
Full=Protocadherin-22; Flags: Precursor
gi|13161060|gb|AAK13469.1|AF332217_1 protocadherin 11 [Homo sapiens]
gi|157169592|gb|AAI52898.1| Protocadherin 11 Y-linked [synthetic construct]
gi|261857964|dbj|BAI45504.1| protocadherin 11 Y-linked [synthetic construct]
Length = 1340
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 517 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 574
Query: 61 TDRG 64
D G
Sbjct: 575 KDNG 578
>gi|322967539|sp|D3ZE55.2|PCDH8_RAT RecName: Full=Protocadherin-8; AltName: Full=Activity-regulated
cadherin-like protein; Short=Arcadlin; Flags: Precursor
gi|149050049|gb|EDM02373.1| protocadherin 8, isoform CRA_a [Rattus norvegicus]
Length = 1069
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|109079410|ref|XP_001110265.1| PREDICTED: protocadherin Fat 2-like [Macaca mulatta]
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD+E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLVGG-NQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D GVNA V+Y+L + + F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRATDADRGVNAEVHYSLLKG-NGEGFFNINALLGIITLAQKLDRANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDITLKKPFDYQALNKYRLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKETNSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|13787217|ref|NP_001438.1| protocadherin Fat 2 precursor [Homo sapiens]
gi|296434503|sp|Q9NYQ8.2|FAT2_HUMAN RecName: Full=Protocadherin Fat 2; Short=hFat2; AltName:
Full=Cadherin family member 8; AltName: Full=Multiple
epidermal growth factor-like domains protein 1;
Short=Multiple EGF-like domains protein 1; Flags:
Precursor
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLIGG-NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDG 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D GVNA V+Y+L + S F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRAMDADRGVNAEVHYSLLKGNSE-GFFNINALLGIITLAQKLDQANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|60360120|dbj|BAD90279.1| mKIAA0327 protein [Mus musculus]
Length = 933
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V ASDPD GVN V Y + + ++ F++ +GE+ +A++LD+E S YE +
Sbjct: 262 LLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTGEMTVAKNLDYEECSLYEMEIQ 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 AEDVG 326
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ ++A DPD NA V Y++ E + +++ + S +G + Q DFE +
Sbjct: 472 IFSLTAHDPDSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQL 531
Query: 57 PVVATDRG 64
V+ATD G
Sbjct: 532 LVIATDSG 539
>gi|18087767|ref|NP_291069.1| protocadherin gamma subfamily A, 8 precursor [Mus musculus]
gi|13876342|gb|AAK26091.1| protocadherin gamma A8 [Mus musculus]
gi|32452002|gb|AAH54787.1| Protocadherin gamma subfamily A, 8 [Mus musculus]
gi|148678183|gb|EDL10130.1| mCG133388, isoform CRA_m [Mus musculus]
Length = 932
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V ASDPD GVN V Y + + ++ F++ +GE+ +A++LD+E S YE +
Sbjct: 261 LLTVRASDPDEGVNGKVTYKFRKINEKQSLLFHLHENTGEMTVAKNLDYEECSLYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ ++A DPD NA V Y++ E + +++ + S +G + Q DFE +
Sbjct: 471 IFSLTAHDPDSQENAQVTYSVSEDTIQGVPLSSYISINSDTGILYALQSFDFEKIQDLQL 530
Query: 57 PVVATDRG 64
V+ATD G
Sbjct: 531 LVIATDSG 538
>gi|112181162|ref|NP_067518.2| protocadherin-8 isoform 1 precursor [Mus musculus]
gi|81912655|sp|Q7TSK3.1|PCDH8_MOUSE RecName: Full=Protocadherin-8; AltName: Full=Arcadlin; AltName:
Full=Paraxial protocadherin; Flags: Precursor
gi|31544950|gb|AAH53008.1| Protocadherin 8 [Mus musculus]
gi|148703808|gb|EDL35755.1| protocadherin 8 [Mus musculus]
Length = 1070
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|7407144|gb|AAF61928.1|AF231022_1 protocadherin Fat 2 [Homo sapiens]
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLIGG-NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDG 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D GVNA V+Y+L + S F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRAMDADRGVNAEVHYSLLKGNSE-GFFNINALLGIITLAQKLDQANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|10433211|dbj|BAB13935.1| unnamed protein product [Homo sapiens]
Length = 744
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
>gi|443732108|gb|ELU16963.1| hypothetical protein CAPTEDRAFT_228969 [Capitella teleta]
Length = 1137
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R++ASD D G NA++ Y++ + V+G + + D+E++ YE+ VVA
Sbjct: 478 IMRLNASDDDIGDNALIEYSIANLGGFPGSLAIDEVTGVVTASAIFDYETKIRYEYVVVA 537
Query: 61 TDRG 64
TD+G
Sbjct: 538 TDKG 541
>gi|54019440|ref|NP_958825.1| protocadherin alpha-C2 precursor [Rattus norvegicus]
gi|40645546|dbj|BAD06380.1| cadherin-related neuronal receptor c2 [Rattus norvegicus]
gi|50512344|gb|AAT77567.1| protocadherin alpha c2 [Rattus norvegicus]
Length = 1006
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N + Y+L S F + + +GE+ ++ LD+E SSY+ V
Sbjct: 275 VVKLNASDPDEGSNGELRYSLSSYTSDRERQLFSIDATTGEVRVSGTLDYEESSSYQIYV 334
Query: 59 VATDRG 64
ATDRG
Sbjct: 335 QATDRG 340
>gi|157649900|gb|ABV59325.1| protocadherin epsilon7 [Callorhinchus milii]
Length = 801
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A D D G+NA +NYT S F + S SGEI + LDFE + YE V
Sbjct: 255 VIQINAVDLDAGINADLNYTFSSYSSIRGREIFKLDSESGEIKLQGVLDFEETNVYELYV 314
Query: 59 VATDRG 64
ATD+G
Sbjct: 315 QATDKG 320
>gi|114602953|ref|XP_001168406.1| PREDICTED: protocadherin Fat 2 [Pan troglodytes]
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLIGG-NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D GVNA V+Y+L + S F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRAMDADRGVNAEVHYSLLKGNSE-GFFNINALLGIITLAQKLDQANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I D+D+ES S++F V D+
Sbjct: 1787 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSDMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|291387494|ref|XP_002710307.1| PREDICTED: protocadherin beta 14 [Oryctolagus cuniculus]
Length = 809
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFPVVA 60
VSASD D G NA V Y+L P + + + SV SG++ + LD+E+ ++EF V A
Sbjct: 473 VSASDRDAGANAQVTYSLLPPPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRA 532
Query: 61 TDRG 64
DRG
Sbjct: 533 ADRG 536
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ +SA D D G ++YTL + F + V+GE+ + LDFE SY
Sbjct: 261 IITLSAKDIDAGSFGKISYTLFHASEDVRKTFEINPVTGEVGLKSHLDFEVIQSYTITTQ 320
Query: 60 ATDRG 64
ATD G
Sbjct: 321 ATDGG 325
>gi|344265050|ref|XP_003404600.1| PREDICTED: protocadherin beta-2-like [Loxodonta africana]
Length = 797
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
VSA D D G N ++YT + S N F + + SGE+ + Q LDFES +Y + ATD
Sbjct: 265 VSARDLDIGTNGEISYTFFQASEDIRNTFRINTESGELLLTQKLDFESVQTYTLNIQATD 324
Query: 63 RG 64
G
Sbjct: 325 GG 326
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P++ H + S+ +G + + LD+E+ ++EF
Sbjct: 474 VSATDRDSGSNAQVTYSL--LPAQDPHLPLASLVSINADNGHLFALRSLDYEALRTFEFL 531
Query: 58 VVATDRG 64
V ATD G
Sbjct: 532 VGATDAG 538
>gi|260785516|ref|XP_002587807.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
gi|229272960|gb|EEN43818.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
Length = 4039
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ + A DPD N+ V Y++ P N F + SV+G++ + DLD E+ SY V A
Sbjct: 2019 VMTIRAEDPDEERNSYVEYSMASIPG--NKFALDSVTGQLRVNGDLDREATPSYIVTVTA 2076
Query: 61 TDRGK 65
TD+G+
Sbjct: 2077 TDKGR 2081
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RVSASD D G NA+V YT+ E + F + S SG+I +AQ LD E Y V
Sbjct: 1239 VVRVSASDMDYGNNALVRYTITEG-NDEGKFLIDSSSGQIMLAQLLDREVEDFYSLLVDV 1297
Query: 61 TDRGKE 66
D E
Sbjct: 1298 RDSASE 1303
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSASD D G N Y L + + N F + +G++ + LD E R SY V A
Sbjct: 2644 VLTVSASDADSGSNGEFEYRLRAAGNLDNSFQVNPNTGQVSTRRFLDREQRDSYSLVVEA 2703
Query: 61 TDRGKET 67
D+G T
Sbjct: 2704 VDKGSPT 2710
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A DPD G N V Y E+ TN F + +G + +AQ+L S++ Y V A
Sbjct: 1558 VLNVVAEDPDEGTNGEVRY--AETSGNTNQFDIGGTTGVVTLAQNLS-PSQTFYTLVVSA 1614
Query: 61 TDRG 64
TD+G
Sbjct: 1615 TDQG 1618
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
+A DPD GVNA V Y L +PS N F + SG + +A L +E Y + ATDRG
Sbjct: 927 AAQDPDDGVNAQVTYELITNPS--NKFQVNGDSGIVSLAGALSYEV-GQYVLELQATDRG 983
Query: 65 KETQ 68
Q
Sbjct: 984 LPPQ 987
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+++VS +DPD G NAM Y + F M SG + +A LD E YE
Sbjct: 2749 VIQVSTTDPDIGSNAMAQYKFSLDSQYAEARGKFNMGRDSGNVTVASTLDREISDHYELL 2808
Query: 58 VVATDRGKE 66
V+A D E
Sbjct: 2809 VIAEDSAWE 2817
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTN---HFYMKSVSGEICIAQDLDFESRSSYEFP 57
+++VSASD D G+N V Y + +R N F + SG+I +LD E R+SY+
Sbjct: 718 VVQVSASDLDAGLNGRVTYQI----TRGNPDGKFTISPQSGQITTTAELDREVRASYQLE 773
Query: 58 VVATD 62
V A D
Sbjct: 774 VTARD 778
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
++A+D D G N + Y++ E + F + S +G++ +A+ LD+ES + Y + A+D
Sbjct: 1348 LTATDGDAGSNGEITYSISEGNAH-GTFTLDSYTGKLYLAKALDYESTNVYRLNITASDH 1406
Query: 64 G 64
G
Sbjct: 1407 G 1407
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+ V A+D D GVN + Y++ G R FY+ +G + +A LD+E+ +Y +
Sbjct: 3073 VFTVVATDRDSGVNGEIRYSIVGGDDYR--QFYIDPRTGSVTVAAVLDYETTPTYHLNIS 3130
Query: 60 ATDRG 64
A DRG
Sbjct: 3131 ARDRG 3135
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+DPD G N + Y++ + + F + SG++ ++D E S+++ V ATD+
Sbjct: 1453 VTATDPDSGSNGEIQYSIASQVPQGDQFAVNPSSGQVFTRAEIDREFASTFDITVRATDQ 1512
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N +V Y++ S + N + +V+G I +A+ +D E + Y V A
Sbjct: 2123 LVQVVAADVDEGTNGVVRYSI-VSGNTDNDLAINAVTGRISVARLIDHERTTGYNLVVRA 2181
Query: 61 TDRG 64
D+G
Sbjct: 2182 RDQG 2185
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A+D D G NA + Y + + + F + +V+GEI LD+E + Y V A
Sbjct: 3178 VVMVTATDADTGANAAIRYQITGGDGQ-DLFIIDAVTGEITSQGGLDYERKQMYTLQVTA 3236
Query: 61 TD 62
T+
Sbjct: 3237 TN 3238
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
SA+DPD G N V Y+L S S N F + V+G I A L +S S Y + A+D G
Sbjct: 2442 SATDPDEGTNGDVRYSL--SGSDANRFTIDRVTGVISTAMTLS-DSSSQYNLQITASDLG 2498
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+D D G + +VNY L S S F + SG I +AQ LD E+ S V+A +R
Sbjct: 3286 VYATDRDDGPDGIVNYILVGS-SNDKGFAIGLESGAITVAQRLDRETSSHIILSVIAKNR 3344
Query: 64 G 64
G
Sbjct: 3345 G 3345
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D G NA + Y L +S F + +G + Q+LD+E +Y V A
Sbjct: 287 VLTVRATDIDEGTNAEITYLL-DSGEPATKFQIDPRTGVVTTLQELDYEESDNYYVNVQA 345
Query: 61 TDRGKETQ 68
D G Q
Sbjct: 346 HDNGSPIQ 353
>gi|218505789|ref|NP_001136242.1| protocadherin-15 isoform CD2-2 precursor [Homo sapiens]
Length = 1539
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|119582077|gb|EAW61673.1| FAT tumor suppressor homolog 2 (Drosophila) [Homo sapiens]
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLIGG-NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDG 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D GVNA V+Y+L + S F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRAMDADRGVNAEVHYSLLKGNSE-GFFNINALLGIITLAQKLDQANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|426350687|ref|XP_004042901.1| PREDICTED: protocadherin Fat 2 [Gorilla gorilla gorilla]
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLIGG-NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V+Y+L + S F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRAMDADRGFNAEVHYSLLKGNSE-GFFNINALLGIITLAQKLDQANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|11036654|ref|NP_061756.1| protocadherin beta-13 precursor [Homo sapiens]
gi|13431381|sp|Q9Y5F0.1|PCDBD_HUMAN RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
Precursor
gi|5457033|gb|AAD43753.1|AF152492_1 protocadherin beta 13 [Homo sapiens]
gi|14009455|gb|AAK51613.1|AF217745_1 protocadherin-beta13 [Homo sapiens]
gi|21620005|gb|AAH33068.1| Protocadherin beta 13 [Homo sapiens]
gi|30411001|gb|AAH51348.1| Protocadherin beta 13 [Homo sapiens]
gi|37181979|gb|AAQ88793.1| PCDHB13 [Homo sapiens]
gi|47939613|gb|AAH71934.1| Protocadherin beta 13 [Homo sapiens]
gi|119582374|gb|EAW61970.1| protocadherin beta 13 [Homo sapiens]
Length = 798
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++F
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFR 530
Query: 58 VVATDRG 64
V A+D G
Sbjct: 531 VGASDHG 537
>gi|62510888|sp|Q5DRD6.1|PCDBD_PANTR RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
Precursor
Length = 798
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFEFR 530
Query: 58 VVATDRG 64
V A+D G
Sbjct: 531 VGASDHG 537
>gi|397517685|ref|XP_003829037.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Pan paniscus]
Length = 4349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLIGG-NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D GVNA V+Y+L + S F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRAMDADRGVNAEVHYSLLKGNSE-GFFNIDALLGIITLAQKLDQANHAPHTLTVKA 1632
Query: 61 TDRG 64
DRG
Sbjct: 1633 EDRG 1636
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|354485678|ref|XP_003505010.1| PREDICTED: protocadherin-15 isoform 3 [Cricetulus griseus]
Length = 1672
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDHYELVVVATD 793
>gi|344265580|ref|XP_003404861.1| PREDICTED: protocadherin gamma-A6 [Loxodonta africana]
Length = 811
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G++A V Y+ + + + F++ +++GEI + +LD+E SSYE V
Sbjct: 261 VLSVNATDQDEGIHAEVTYSFVKITKKISQIFHLNALTGEISTSGELDYEDSSSYELDVE 320
Query: 60 ATDR 63
A DR
Sbjct: 321 ARDR 324
>gi|332234442|ref|XP_003266417.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Nomascus
leucogenys]
Length = 4007
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2475 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2534
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2535 VAYDHGQTIQ 2544
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD E SSY + A
Sbjct: 2999 ILTVSATDEDGPLNSDITYSLVGG-NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRA 3057
Query: 61 TDRGK 65
TD G+
Sbjct: 3058 TDSGQ 3062
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V + L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRFVLTDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D GVNA V+Y+L + S F + ++ G I +AQ D + + + V A
Sbjct: 1574 LLQVRAMDADRGVNAEVHYSLLKGNSE-GFFNINALLGIITLAQKFDRANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 2794 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 2851
Query: 64 G 64
G
Sbjct: 2852 G 2852
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
>gi|291387496|ref|XP_002710176.1| PREDICTED: Protocadherin beta-17-like [Oryctolagus cuniculus]
Length = 812
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFPVVA 60
VSASD D G NA V Y+L P + + + SV SG++ + LD+E+ ++EF V A
Sbjct: 474 VSASDRDAGANAQVTYSLLPPPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRA 533
Query: 61 TDRG 64
DRG
Sbjct: 534 ADRG 537
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSASD D G+N ++Y+ S F + +SGE+ + LDFE+ SY +
Sbjct: 261 IIKVSASDLDAGINGELSYSFSHVSRDARKTFEIHPISGEVHLKALLDFETIQSYTINIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AIDGG 325
>gi|441600761|ref|XP_004087638.1| PREDICTED: protocadherin-15 isoform 2 [Nomascus leucogenys]
Length = 1782
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 745 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 800
>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
Length = 3262
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA DPD G N +V Y + S+ H + SG + + LD+E S Y + A
Sbjct: 2584 LVQVSAHDPDLGTNGLVRYDIISGNSK-GHLKLDPQSGLLVVNNSLDYEKDSKYILTIRA 2642
Query: 61 TDRGKETQ 68
+D GK ++
Sbjct: 2643 SDGGKSSE 2650
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSA DPD G N V Y+L + S+ F + + +G I + LD ESR+ Y VA
Sbjct: 1848 VLRVSALDPDEGSNGEVTYSLTDDNSQ-GAFLIDAFTGAIRTTRSLDRESRAQYSLRAVA 1906
Query: 61 TD 62
TD
Sbjct: 1907 TD 1908
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V ASD D G+N + Y++ S + F + SV G + LD E SY+ + A
Sbjct: 2158 IMQVFASDADSGMNGQIEYSI-LSGNLNGAFILDSVRGILATNVLLDREITPSYKLVLQA 2216
Query: 61 TDRGK 65
DRG
Sbjct: 2217 ADRGN 2221
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 6 ASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
ASDPD G N ++Y+ LGE F + S +G I Q LD E +Y + A D G
Sbjct: 1748 ASDPDHGENGTIHYSILGE--DYRGRFTINSHTGAISTTQVLDREETQNYTLTIQARDYG 1805
>gi|326673363|ref|XP_003199858.1| PREDICTED: protocadherin alpha-7-like [Danio rerio]
Length = 794
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV+A+DPD G N V Y+LG + + F + V+G++ + LD+E + Y+ +
Sbjct: 263 ILRVNATDPDEGQNGEVVYSLGHNVNYKLRKLFDVNPVTGDVIVTGLLDYEVKDKYQIDI 322
Query: 59 VATDRG 64
A+D+G
Sbjct: 323 QASDKG 328
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G N+ V+Y + N F + S +GEI + DFE+ +++F
Sbjct: 477 LFSVSASDKDTGANSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFETSKTFQF 536
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 537 HILATDSG 544
>gi|7533000|gb|AAF63319.1|AF231125_1 paraxial protocadherin [Mus musculus]
Length = 1071
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 266 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 325
Query: 59 VATDRG 64
A DRG
Sbjct: 326 RAQDRG 331
>gi|392338882|ref|XP_002726011.2| PREDICTED: protocadherin-23-like [Rattus norvegicus]
gi|392345759|ref|XP_002729134.2| PREDICTED: protocadherin-23-like [Rattus norvegicus]
Length = 2730
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G+N+ + Y++ S ++ F + +SG I LD+ES SSY V A
Sbjct: 1622 VIQVSATDLDGGLNSQIEYSI-VSGNQAGAFRIDELSGVIVTNSILDYESTSSYSLIVQA 1680
Query: 61 TDRG 64
TDRG
Sbjct: 1681 TDRG 1684
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L +SA D D G+N V Y L E S F + V+G + + LD E+RS Y F VA
Sbjct: 1313 VLVLSAVDKDEGLNGQVEYFLMEETS--GAFAIDPVTGTLRTSGALDREARSQYTFQAVA 1370
Query: 61 TD 62
D
Sbjct: 1371 RD 1372
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
VSA D D G +A + Y + S + HFY++ +G + + + LD+E +++ + A D
Sbjct: 2048 VSADDRDTGSHAQIIYGI-ISGNEKEHFYLEDRTGVLYLVKPLDYEETTAFTLTIQAAD 2105
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
R+SA DPD N V Y++ S + F + S SG + A LD+E ++ + +VA D
Sbjct: 1001 RLSAQDPDAEKNGDVAYSI-LSGNEDMVFVLDSSSGLLRTACPLDYEVKAQHVLTIVAQD 1059
Query: 63 RGKETQ 68
G T+
Sbjct: 1060 GGVPTR 1065
>gi|345328668|ref|XP_003431293.1| PREDICTED: protocadherin gamma-B7-like [Ornithorhynchus anatinus]
Length = 915
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV ASD D GVNA + ++ + PSR F + SGEI LD+ES YE V
Sbjct: 293 VLRVEASDRDEGVNAQITFSFRSIDDPSR-QVFNLDPNSGEIVTGWSLDYESAKGYELDV 351
Query: 59 VATDRG 64
A+D G
Sbjct: 352 EASDGG 357
>gi|332030989|gb|EGI70615.1| Protein dachsous [Acromyrmex echinatior]
Length = 245
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 16 MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
MVNYTL ++S +G+ICI LD E+ E PV+ATDRG
Sbjct: 1 MVNYTLAGGRVENEQLLVRSDTGDICIRSPLDRETVPYLELPVIATDRG 49
>gi|47220482|emb|CAG03262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4006
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSA+D D NA V+Y + SR F + SV+GEI + LD+E+ Y V A
Sbjct: 1165 ILRVSATDRDKDSNAAVHYNIISGNSR-GQFSIDSVTGEIQVVAPLDYEAEREYTLRVRA 1223
Query: 61 TDRGK 65
D G+
Sbjct: 1224 QDNGR 1228
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y L ++ F + S +G I + +LD+E + +Y + A
Sbjct: 1478 VVMISATDDDVGENARITYLLEDN---IPQFRIDSATGAITLQAELDYEDQMTYTLAITA 1534
Query: 61 TDRG 64
D G
Sbjct: 1535 KDNG 1538
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A+DPD G NA + Y + E + F M SGE+ DLD+E+R+ Y V AT
Sbjct: 1670 QITATDPDEGANAQIMYQIVEG-NIPEIFQMDIFSGELTSLIDLDYETRNEYVIVVQAT 1727
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ +SASDPD G V+Y++ + +++F++ +G I Q LD E + F V
Sbjct: 947 VILMSASDPDPGDAGRVSYSMAPLMNSRSSDYFHIHPETGLITTTQTLDREHMDLHYFRV 1006
Query: 59 VATDRG 64
ATD G
Sbjct: 1007 TATDYG 1012
>gi|292620525|ref|XP_001921777.2| PREDICTED: protocadherin gamma-A4-like [Danio rerio]
Length = 796
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV+A+DPD G N V Y+LG + + F + V+G++ + LD+E + Y+ +
Sbjct: 263 ILRVNATDPDEGQNGEVVYSLGHNVNYKLRKLFDVNPVTGDVIVTGLLDYEVKDKYQIDI 322
Query: 59 VATDRG 64
A+D+G
Sbjct: 323 QASDKG 328
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G N+ V+Y + N F + S +GEI + DFE+ +++F
Sbjct: 477 LFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFETSKTFQF 536
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 537 HILATDSG 544
>gi|116110498|gb|ABJ74628.1| stan [Drosophila pseudoobscura]
Length = 549
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSASDPD G+N + Y L + F + SG + + LD ES + Y +A
Sbjct: 212 VIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTVRTNKGLDRESVAVYHLTAIA 271
Query: 61 TDRG 64
D+G
Sbjct: 272 VDKG 275
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSA+D D G+NA + Y+L E + F + +G I LD E+ S Y
Sbjct: 102 VLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLL 161
Query: 57 PVVATDRG 64
V A D G
Sbjct: 162 TVTAKDGG 169
>gi|269914130|ref|NP_001019301.2| protocadherin beta-13 precursor [Pan troglodytes]
Length = 798
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFEFR 530
Query: 58 VVATDRG 64
V A+D G
Sbjct: 531 VGASDHG 537
>gi|441600767|ref|XP_004087640.1| PREDICTED: protocadherin-15 isoform 4 [Nomascus leucogenys]
Length = 1789
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 750 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 805
>gi|441600764|ref|XP_004087639.1| PREDICTED: protocadherin-15 isoform 3 [Nomascus leucogenys]
Length = 1681
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 743 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 798
>gi|18087781|ref|NP_444361.1| protocadherin beta 6 precursor [Mus musculus]
gi|13876314|gb|AAK26077.1| protocadherin beta 6 [Mus musculus]
Length = 772
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G++ V Y+L + F + ++GEI + LDFE+ S Y +VA
Sbjct: 261 VVTVSARDLDAGIHGNVAYSLFQGGGGPQPFVIDEITGEIRLKGALDFEATSYYTMEIVA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDSG 324
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P + S+ +G++ + +D+E+ ++EF
Sbjct: 472 ISATDSDSGSNAHITYSL--LPPHDLQLSLASLVSINADNGQLFALRAMDYEALQAFEFH 529
Query: 58 VVATDRG 64
VVA D G
Sbjct: 530 VVARDGG 536
>gi|363738906|ref|XP_003642093.1| PREDICTED: protocadherin gamma-B1-like [Gallus gallus]
Length = 917
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D G N V+Y G P S + F + + SGE+ A LDFE RS Y F +
Sbjct: 393 VLQVRAADADAGSNGRVSYFFGNVPESVRSLFSIDAESGEVRTAGPLDFEERSKYSFGLE 452
Query: 60 ATDRGKET 67
D G T
Sbjct: 453 GRDGGGLT 460
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVVA 60
A DPD G N+++ Y L E S + MK G E+ + + LD E +SS++ + A
Sbjct: 289 AQDPDVGSNSLLTYQLTEDSSFS--LAMKVSKGGKQQPELVLERALDREKQSSFQMVLTA 346
Query: 61 TDRG 64
TD G
Sbjct: 347 TDGG 350
>gi|149050050|gb|EDM02374.1| protocadherin 8, isoform CRA_b [Rattus norvegicus]
Length = 972
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|25090328|sp|Q9VW71.2|FAT2_DROME RecName: Full=Fat-like cadherin-related tumor suppressor homolog;
AltName: Full=Protein kugelei; Flags: Precursor
Length = 4705
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + D D GVN MV Y + + ++ N F + S +G I + + LD+E+ + Y F V +
Sbjct: 1842 LTLQVKDADVGVNGMVEYHIVDDLAK-NFFKIDSTTGAIELLRQLDYETNAGYTFDVTVS 1900
Query: 62 DRGK 65
D GK
Sbjct: 1901 DMGK 1904
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G+N + Y+L + +F + +GEI + Q L + S +E VVA
Sbjct: 199 ILKVTADDADLGINGEIYYSL---LMDSEYFAIHPTTGEITLLQQLQYAENSHFELTVVA 255
Query: 61 TDRG 64
DRG
Sbjct: 256 YDRG 259
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D G N + Y L ++ + N F + SG I + LD E +S Y F V+
Sbjct: 2895 LVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 2954
Query: 60 ATDRG 64
A D G
Sbjct: 2955 AADNG 2959
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ SDPD G NA+V Y + + F + SG + A+ LD E +SSY V A
Sbjct: 416 VIRLKVSDPDLGKNALV-YLEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSA 474
Query: 61 TDRG 64
D+
Sbjct: 475 IDQA 478
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D VN +V Y + E F + +G I +++ LD E+ S Y + A
Sbjct: 3413 ILDVKATDEDSDVNGLVTYNI-ERGDNIGQFSIDPKNGTISVSRPLDRETISHYTLEIQA 3471
Query: 61 TDRG 64
D+G
Sbjct: 3472 CDQG 3475
>gi|344246426|gb|EGW02530.1| Protocadherin-15 [Cricetulus griseus]
Length = 1827
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 686 QVRATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDHYELVVVATD 741
>gi|297301368|ref|XP_002805772.1| PREDICTED: protocadherin-15 isoform 3 [Macaca mulatta]
Length = 1788
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 750 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 805
>gi|292621593|ref|XP_002664697.1| PREDICTED: protocadherin-16-like [Danio rerio]
Length = 3237
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RVSASD D G+N ++Y L HF + S +GEI LD E +SSY+ VVA D
Sbjct: 1092 RVSASDRDAGLNGRLSYRLLH---LDRHFQINSHTGEISTKLSLDRELQSSYQLIVVAQD 1148
Query: 63 RG 64
G
Sbjct: 1149 GG 1150
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D G N +V Y + S +H++ + S +G I + + LD+E R +E V
Sbjct: 232 ILQVFASDADEGDNGLVLYDINRRQSDPDHYFVIDSRTGVITLNKPLDYEMRRVHELVVQ 291
Query: 60 ATDRGKETQ 68
A D + +
Sbjct: 292 ARDNASQPE 300
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
R+S +DPD G A VN +L + S+ IC+ Q LD E + YE V+ATD
Sbjct: 345 RISVTDPDYGEYANVNVSLEGGNGKFALTTKDSIIYLICVDQILDREEQDHYELRVMATD 404
Query: 63 RG 64
G
Sbjct: 405 SG 406
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G N + Y++ S R F + +GE+ + L R Y F ++A+DR
Sbjct: 1200 VHAKDPDEGENGTIFYSM--SGPRAERFTLNPNTGELRSSSALSHSERPEYSFIILASDR 1257
Query: 64 GKETQ 68
G Q
Sbjct: 1258 GSPPQ 1262
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSASD D G N+ V Y L S F + +G I A LD E +SY F V A
Sbjct: 1830 VLEVSASDKDEGSNSQVVYFLSRESS--GMFIVDQHTGRIITAATLDREKVASYNFQVYA 1887
Query: 61 TD 62
D
Sbjct: 1888 MD 1889
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V+A D D G N V Y+ L + ++ F + +V+G + LD+E + VV
Sbjct: 449 VVQVTARDKDQGPNGDVQYSILQNEGTHSDWFSVDAVTGVVTTLTQLDYEIDPTPSITVV 508
Query: 60 ATDRGK 65
A+DRG+
Sbjct: 509 ASDRGR 514
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ S S + F + ++G I A +D E + ++A
Sbjct: 2142 IIQVLANDLDQGQNGQVTYSI-RSSSMSGLFKIDPITGSISTAAIMDREIWTQTNLVIMA 2200
Query: 61 TDRG 64
TDRG
Sbjct: 2201 TDRG 2204
>gi|218505785|ref|NP_001136240.1| protocadherin-15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 716 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 771
>gi|162415902|gb|ABX89267.1| protocadherin 15 (predicted) [Papio anubis]
Length = 874
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 372 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 427
>gi|149017345|gb|EDL76396.1| rCG49295, isoform CRA_af [Rattus norvegicus]
Length = 871
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G+N V YT + S+ + F + S +GE+ + + LDFE YE +
Sbjct: 261 VLVVNATDPDEGINGEVMYTFRKMKSKASEIFQLNSQTGEVLVGKPLDFEKYRFYEMEIQ 320
Query: 60 ATDRG 64
D G
Sbjct: 321 GQDGG 325
>gi|218505798|ref|NP_001136245.1| protocadherin-15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 716 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 771
>gi|112181187|ref|NP_001036191.1| protocadherin-8 isoform 2 precursor [Mus musculus]
Length = 973
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|3253083|dbj|BAA29050.1| Cadherin-related neural recepter 5 [Mus musculus]
Length = 914
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G+N + Y+ SP+ + F + S SGE+ LDFE YE PV
Sbjct: 225 VINLNATDPDEGINGDIIYSFRRPVSPAVVHAFNIDSNSGEVRTKGLLDFEEIKLYEIPV 284
Query: 59 VATDRG 64
A D+G
Sbjct: 285 EAVDKG 290
>gi|194591873|gb|ACF76476.1| protocadherin-15-CD2 isoform 1 [Homo sapiens]
Length = 1783
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 745 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 800
>gi|218505787|ref|NP_001136241.1| protocadherin-15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 750 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 805
>gi|218505779|ref|NP_001136237.1| protocadherin-15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 667 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 722
>gi|194389122|dbj|BAG61578.1| unnamed protein product [Homo sapiens]
Length = 658
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G+NA V Y+L P + H + S+ +G + + LD+E+ S+EF
Sbjct: 335 VSATDRDSGINAQVTYSL--LPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFR 392
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 393 VGATDRG 399
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G V+Y L + F + +++GEI + + LDFE SY+ V A
Sbjct: 124 VITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFEEIQSYDVDVEA 183
Query: 61 TDRG 64
TD G
Sbjct: 184 TDGG 187
>gi|187956461|gb|AAI50717.1| Protocadherin beta 6 [Mus musculus]
Length = 772
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G++ V Y+L + F + ++GEI + LDFE+ S Y +VA
Sbjct: 261 VVTVSARDLDAGIHGNVAYSLFQGGGGPQPFVIDEITGEIRLKGALDFEATSYYTMEIVA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDSG 324
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P + S+ +G++ + +D+E+ ++EF
Sbjct: 472 ISATDSDSGSNAHITYSL--LPPHDLQLSLASLVSINADNGQLFALRAMDYEALQAFEFH 529
Query: 58 VVATDRG 64
VVA D G
Sbjct: 530 VVARDGG 536
>gi|149048259|gb|EDM00835.1| rCG62628 [Rattus norvegicus]
Length = 1580
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G+N+ + Y++ S ++ F + +SG I LD+ES SSY V A
Sbjct: 473 VIQVSATDLDGGLNSQIEYSI-VSGNQAGAFRIDELSGVIVTNSILDYESTSSYSLIVQA 531
Query: 61 TDRG 64
TDRG
Sbjct: 532 TDRG 535
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L +SA D D G+N V Y L E S F + V+G + + LD E+RS Y F VA
Sbjct: 202 VLVLSAVDKDEGLNGQVEYFLMEETS--GAFAIDPVTGTLRTSGALDREARSQYTFQAVA 259
Query: 61 TD 62
D
Sbjct: 260 RD 261
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
VSA D D G +A + Y + S + HFY++ +G + + + LD+E +++ + A D
Sbjct: 899 VSADDRDTGSHAQIIYGI-ISGNEKEHFYLEDRTGVLYLVKPLDYEETTAFTLTIQAAD 956
>gi|116110496|gb|ABJ74627.1| stan [Drosophila affinis]
Length = 549
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSASDPD G+N + Y L + F + SG + + LD ES + Y +A
Sbjct: 212 VIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTVRTNKGLDRESVAVYHLTAIA 271
Query: 61 TDRG 64
D+G
Sbjct: 272 VDKG 275
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSA+D D G+NA + Y+L E + F + +G I LD E+ S Y
Sbjct: 102 VLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIITNAPLDRETTSGYLL 161
Query: 57 PVVATDRG 64
V A D G
Sbjct: 162 TVTAKDGG 169
>gi|12408332|ref|NP_074059.1| protocadherin-8 precursor [Rattus norvegicus]
gi|5478349|dbj|BAA82442.1| arcadlin [Rattus norvegicus]
Length = 972
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|410899192|ref|XP_003963081.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Takifugu rubripes]
Length = 2908
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSA+D D NA V+Y + SR F + SV+GEI + LD+E+ Y V A
Sbjct: 280 ILRVSATDRDKDSNAAVHYNIISGNSR-GQFSIDSVTGEIQVVAPLDYEAEREYTLRVRA 338
Query: 61 TDRGK 65
D G+
Sbjct: 339 QDNGR 343
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A+DPD G NA + Y + E + F M SGE+ DLD+E+R+ Y V AT
Sbjct: 804 QITATDPDEGANAQIMYQIVEG-NIPEIFQMDIFSGELTSLIDLDYETRNEYVIVVQAT 861
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SA+D D G NA + Y L ++ F + S +G I + +LD+E + +Y + A D
Sbjct: 596 ISATDDDVGENARITYFLEDN---IPQFRIDSATGAITLQAELDYEDQMTYTLAITAKDN 652
Query: 64 G 64
G
Sbjct: 653 G 653
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD ES YE A
Sbjct: 696 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGILRTVRRLDRESVPFYELTAYA 755
Query: 61 TDRGKETQ 68
DRG Q
Sbjct: 756 VDRGVPPQ 763
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ +SASDPD G V YT+ + +++F++ +G I Q LD E + F V
Sbjct: 62 VIVMSASDPDPGDAGRVRYTMAPLMNSRSSDYFHIHQDTGLITTTQILDREHMDLHYFRV 121
Query: 59 VATDRG 64
ATD G
Sbjct: 122 TATDYG 127
>gi|354485686|ref|XP_003505014.1| PREDICTED: protocadherin-15 isoform 7 [Cricetulus griseus]
Length = 1926
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDHYELVVVATD 793
>gi|354485676|ref|XP_003505009.1| PREDICTED: protocadherin-15 isoform 2 [Cricetulus griseus]
Length = 1909
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDHYELVVVATD 771
>gi|218505775|ref|NP_001136235.1| protocadherin-15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 743 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 798
>gi|218505781|ref|NP_001136238.1| protocadherin-15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|441600758|ref|XP_004087637.1| PREDICTED: protocadherin-15 isoform 1 [Nomascus leucogenys]
Length = 1674
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|442633556|ref|NP_649171.3| kugelei, isoform C [Drosophila melanogaster]
gi|440216048|gb|AAF49078.3| kugelei, isoform C [Drosophila melanogaster]
Length = 4689
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + D D GVN MV Y + + ++ N F + S +G I + + LD+E+ + Y F V +
Sbjct: 1845 LTLQVKDADVGVNGMVEYHIVDDLAK-NFFKIDSTTGAIELLRQLDYETNAGYTFDVTVS 1903
Query: 62 DRGK 65
D GK
Sbjct: 1904 DMGK 1907
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G+N + Y+L + +F + +GEI + Q L + S +E VVA
Sbjct: 202 ILKVTADDADLGINGEIYYSL---LMDSEYFAIHPTTGEITLLQQLQYAENSHFELTVVA 258
Query: 61 TDRG 64
DRG
Sbjct: 259 YDRG 262
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D G N + Y L ++ + N F + SG I + LD E +S Y F V+
Sbjct: 2879 LVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 2938
Query: 60 ATDRG 64
A D G
Sbjct: 2939 AADNG 2943
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ SDPD G NA+V Y + + F + SG + A+ LD E +SSY V A
Sbjct: 419 VIRLKVSDPDLGKNALV-YLEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSA 477
Query: 61 TDRG 64
D+
Sbjct: 478 IDQA 481
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D VN +V Y + E F + +G I +++ LD E+ S Y + A
Sbjct: 3397 ILDVKATDEDSDVNGLVTYNI-ERGDNIGQFSIDPKNGTISVSRPLDRETISHYTLEIQA 3455
Query: 61 TDRG 64
D+G
Sbjct: 3456 CDQG 3459
>gi|62510890|sp|Q5DRD8.1|PCDBB_PANTR RecName: Full=Protocadherin beta-11; Short=PCDH-beta-11; Flags:
Precursor
Length = 797
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA VNY+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVNYSL--LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSA D D G N + YTL + F + SG+I + LDFE+ SY +
Sbjct: 261 ILTVSAWDLDSGTNGEICYTLSHASEDIRKTFEINQKSGDITLTAPLDFETIESYSIIIQ 320
Query: 60 ATDRG 64
ATDRG
Sbjct: 321 ATDRG 325
>gi|354485688|ref|XP_003505015.1| PREDICTED: protocadherin-15 isoform 8 [Cricetulus griseus]
Length = 1906
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDHYELVVVATD 771
>gi|354485682|ref|XP_003505012.1| PREDICTED: protocadherin-15 isoform 5 [Cricetulus griseus]
Length = 1860
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 667 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDHYELVVVATD 722
>gi|354485680|ref|XP_003505011.1| PREDICTED: protocadherin-15 isoform 4 [Cricetulus griseus]
Length = 1929
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDHYELVVVATD 793
>gi|354485674|ref|XP_003505008.1| PREDICTED: protocadherin-15 isoform 1 [Cricetulus griseus]
Length = 1931
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDHYELVVVATD 793
>gi|297301366|ref|XP_002805771.1| PREDICTED: protocadherin-15 isoform 2 [Macaca mulatta]
Length = 1783
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 745 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 800
>gi|218505793|ref|NP_001136244.1| protocadherin-15 isoform CD3-2 precursor [Homo sapiens]
Length = 1677
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|218505777|ref|NP_001136236.1| protocadherin-15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|355782920|gb|EHH64841.1| hypothetical protein EGM_18162, partial [Macaca fascicularis]
Length = 1661
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 446 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 501
>gi|326673313|ref|XP_003199834.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 784
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ A+D D G N+ + Y+LG++ R + F + ++GEI + ++DFE Y+ V
Sbjct: 257 VIKIKATDSDEGSNSEIEYSLGKTLKRKVYDIFDLDHITGEIKVKGEVDFEDTDVYKLDV 316
Query: 59 VATDRGK 65
A+D+G+
Sbjct: 317 EASDKGQ 323
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+ V ASD D NA+++Y + G T+ + S SG I + DFE+ ++F V
Sbjct: 471 IFSVRASDKDVNENALISYQINRGTQNEMTSFLNVNSESGVIYSLKSFDFETIKKFQFDV 530
Query: 59 VATDRG 64
+ATD G
Sbjct: 531 LATDSG 536
>gi|262263280|tpg|DAA06581.1| TPA_inf: protocadherin beta 4 [Anolis carolinensis]
Length = 806
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A D D G NA + Y+ + F++ V+GEI + ++D+E ++YE + ATD
Sbjct: 259 RVEARDLDFGSNAQITYSYQIPEKIQSLFHLNDVTGEITVLGEIDYEKETNYEITIKATD 318
Query: 63 RG 64
G
Sbjct: 319 GG 320
>gi|218505791|ref|NP_001136243.1| protocadherin-15 isoform CD3-1 precursor [Homo sapiens]
Length = 1682
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 743 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 798
>gi|218505783|ref|NP_001136239.1| protocadherin-15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 701 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 756
>gi|115387123|ref|NP_149045.3| protocadherin-15 isoform CD1-4 precursor [Homo sapiens]
gi|116242702|sp|Q96QU1.2|PCD15_HUMAN RecName: Full=Protocadherin-15; Flags: Precursor
gi|14581464|gb|AAK31804.1| protocadherin 15 [Homo sapiens]
gi|162318576|gb|AAI56451.1| Protocadherin 15 [synthetic construct]
Length = 1955
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|301607021|ref|XP_002933123.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Xenopus (Silurana) tropicalis]
Length = 3142
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++RV+A+D D NA+V+Y + SR F + SV+GE+ I LDFE+ Y V A
Sbjct: 382 IVRVTATDIDKDSNALVHYNIISGNSR-GQFSIDSVTGEVQIVTPLDFETEREYTLRVRA 440
Query: 61 TDRGK 65
D G+
Sbjct: 441 QDAGR 445
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y+L ++ F + +G I + LD+E + +Y V+A D
Sbjct: 698 ISASDEDVGENARITYSLEDN---IPQFRIDPDTGAITLRAMLDYEDQVTYTLAVIAKDN 754
Query: 64 G 64
G
Sbjct: 755 G 755
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
++ A+DPD G NA + Y + E + F M SGE+ DLD+E++ Y V AT
Sbjct: 906 KIKATDPDEGPNAQIMYQIVEG-NIPEIFQMDFFSGELTALIDLDYEAKPEYVIVVQAT 963
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D N V YT F ++ SG I + LD ES YE A
Sbjct: 798 VVQISATDRDSHSNGRVQYTFQNGDDGDGDFTIEPTSGIIRTVRKLDRESVPFYELTAYA 857
Query: 61 TDRG 64
DRG
Sbjct: 858 VDRG 861
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A+D D NA + Y + + F + + SG I + +D E R Y V A
Sbjct: 274 ILQLRATDMDSQANANIKYRFVNEQAAHSVFEIDARSGLITTSGQVDREKREKYSLIVEA 333
Query: 61 TDRGKE 66
+D+GK+
Sbjct: 334 SDQGKD 339
>gi|297301372|ref|XP_002805774.1| PREDICTED: protocadherin-15 isoform 5 [Macaca mulatta]
Length = 1680
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 743 QVKATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 798
>gi|194382270|dbj|BAG58890.1| unnamed protein product [Homo sapiens]
Length = 802
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++F
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFR 530
Query: 58 VVATDRG 64
V A+D G
Sbjct: 531 VGASDHG 537
>gi|119574537|gb|EAW54152.1| protocadherin 15, isoform CRA_b [Homo sapiens]
Length = 1954
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 740 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 795
>gi|443718193|gb|ELU08938.1| hypothetical protein CAPTEDRAFT_225723 [Capitella teleta]
Length = 1153
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+ASD D G N ++Y LG S + + + + SG I Q LD E +S F VVA
Sbjct: 482 LLQVTASDEDVGANGFIHYKLG-SNAPDDLVSISAESGAIKALQSLDHERTASLHFKVVA 540
Query: 61 TDRGK 65
D GK
Sbjct: 541 FDHGK 545
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-----MKSVSGEICIAQDLDFESRSSYE 55
+L V A+D D G N ++Y+ S+++ Y + +GEI + LD+E SY
Sbjct: 265 VLTVQATDDDIGANGKISYSFS---SKSHAIYGDLFGVDPSTGEIYTHRVLDYEEAHSYA 321
Query: 56 FPVVATDRGKETQ 68
V+A D G +++
Sbjct: 322 LVVIARDSGSDSR 334
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSG----EICIAQDLDFESRSSYEF 56
+A DPD N++ +YT+ P + + K++ G ++ + + LD E +S Y
Sbjct: 155 AAEDPDAESNSVKSYTIQAGPQIKDKVFGLKLTKTIDGSHDLQLVVLESLDRERKSHYSV 214
Query: 57 PVVATDRG 64
VVATD G
Sbjct: 215 TVVATDGG 222
>gi|442633558|ref|NP_001027138.2| kugelei, isoform D [Drosophila melanogaster]
gi|440216049|gb|AAZ66056.2| kugelei, isoform D [Drosophila melanogaster]
Length = 4699
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + D D GVN MV Y + + ++ N F + S +G I + + LD+E+ + Y F V +
Sbjct: 1845 LTLQVKDADVGVNGMVEYHIVDDLAK-NFFKIDSTTGAIELLRQLDYETNAGYTFDVTVS 1903
Query: 62 DRGK 65
D GK
Sbjct: 1904 DMGK 1907
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G+N + Y+L + +F + +GEI + Q L + S +E VVA
Sbjct: 202 ILKVTADDADLGINGEIYYSL---LMDSEYFAIHPTTGEITLLQQLQYAENSHFELTVVA 258
Query: 61 TDRG 64
DRG
Sbjct: 259 YDRG 262
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D G N + Y L ++ + N F + SG I + LD E +S Y F V+
Sbjct: 2879 LVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 2938
Query: 60 ATDRG 64
A D G
Sbjct: 2939 AADNG 2943
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ SDPD G NA+V Y + + F + SG + A+ LD E +SSY V A
Sbjct: 419 VIRLKVSDPDLGKNALV-YLEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSA 477
Query: 61 TDRG 64
D+
Sbjct: 478 IDQA 481
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D VN +V Y + E F + +G I +++ LD E+ S Y + A
Sbjct: 3397 ILDVKATDEDSDVNGLVTYNI-ERGDNIGQFSIDPKNGTISVSRPLDRETISHYTLEIQA 3455
Query: 61 TDRG 64
D+G
Sbjct: 3456 CDQG 3459
>gi|15072441|gb|AAK31581.1| protocadherin 15 [Homo sapiens]
Length = 1955
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|354500173|ref|XP_003512175.1| PREDICTED: protocadherin-3-like [Cricetulus griseus]
Length = 508
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G++ V Y+L + + F + V+GEI ++++LDFE + Y + A
Sbjct: 261 VLTVSAMDLDAGIHGNVVYSLFQGGGASQPFAIHGVTGEIRLSKELDFEVTNHYNIEIAA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDGG 324
>gi|354485684|ref|XP_003505013.1| PREDICTED: protocadherin-15 isoform 6 [Cricetulus griseus]
Length = 1889
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 701 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDHYELVVVATD 756
>gi|351707599|gb|EHB10518.1| Protocadherin-23 [Heterocephalus glaber]
Length = 3020
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V+ASDPD G+N V Y++ S ++ F + ++SG + + LD ES SY A
Sbjct: 1912 VIQVTASDPDSGLNGRVEYSI-VSGNQGEAFQIDALSGVLTTSALLDHESTKSYSLITQA 1970
Query: 61 TDRGK 65
TD+GK
Sbjct: 1971 TDKGK 1975
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A D D G NA V Y++ S ++HF + + SGEI + L + R SY V+A+D+
Sbjct: 971 VFAKDLDEGNNAEVIYSVS-SEDYSDHFKIDANSGEIRTSTILSYNYRRSYRLTVIASDQ 1029
Query: 64 GK 65
G+
Sbjct: 1030 GQ 1031
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTL------GESPSRTNHFYMKSVSGEICIAQDLDFE-SRSS 53
L+V ASD D G+ V Y+L E+P F + +G+IC++QDLD E +S
Sbjct: 342 FLQVQASDADAGLYGCVEYSLYDGFQSDEAPPV---FQIDPHTGQICVSQDLDRERDPAS 398
Query: 54 YEFPVVATDRG 64
++ V A D G
Sbjct: 399 FDLLVTAKDGG 409
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV A DPD G N V Y + S + F + SG + IA LD+E ++ + +VA D
Sbjct: 1291 RVHARDPDEGRNGKVTYGI-RSGNANAAFMLDESSGLLTIACPLDYEVKTQHILTLVALD 1349
Query: 63 RG 64
G
Sbjct: 1350 DG 1351
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L +SA D D G+N Y L GES + F + V+G + ++ LD E+RS Y F V
Sbjct: 1603 VLVLSAVDKDEGLNGQTEYFLVGES---SGAFTINPVTGTLRTSRALDREARSLYTFWAV 1659
Query: 60 ATD 62
A D
Sbjct: 1660 ARD 1662
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSASD D G +A + Y + S + HFY++ +G + + + LD+E + + V A+D
Sbjct: 2338 VSASDCDMGSHAEIFYQV-ISGNEKEHFYLEERTGVLYLIKPLDYEETTKFTLTVQASDG 2396
Query: 64 GKE 66
K+
Sbjct: 2397 DKK 2399
>gi|194591877|gb|ACF76478.1| protocadherin-15-CD3 isoform 1 [Homo sapiens]
Length = 1675
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|194591875|gb|ACF76477.1| protocadherin-15-CD2 isoform 2 [Homo sapiens]
Length = 1520
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|297301374|ref|XP_002805775.1| PREDICTED: protocadherin-15 isoform 6 [Macaca mulatta]
Length = 1950
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|297301370|ref|XP_002805773.1| PREDICTED: protocadherin-15 isoform 4 [Macaca mulatta]
Length = 1675
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|109079047|ref|XP_001091889.1| PREDICTED: protocadherin beta-14 isoform 2 [Macaca mulatta]
Length = 798
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA+V Y+L PS+ H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDRDSGTNALVTYSL--LPSQDPHLPLASLVSINTDNGHLFALRSLDYEALQEFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ +SA D D G ++YT + F + +SGE+ + LDFE SY +
Sbjct: 261 IVTISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQSYTINIQ 320
Query: 60 ATDRG 64
ATD G
Sbjct: 321 ATDGG 325
>gi|26339466|dbj|BAC33404.1| unnamed protein product [Mus musculus]
Length = 973
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|440909070|gb|ELR59020.1| Protocadherin Fat 3, partial [Bos grunniens mutus]
Length = 3373
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD GVN V Y+L +S + F + S SG I + + LD E +SSY V A
Sbjct: 1928 LTRVQAVDPDVGVNRKVVYSLADSAN--GFFSVDSSSGIIVLERPLDREQQSSYTLRVQA 1985
Query: 61 TDR 63
TD+
Sbjct: 1986 TDQ 1988
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ++D D G N MV+Y + ++ + T++F++ S SG I A+ LD ES V
Sbjct: 1084 VLQVVSTDADSGNNKMVHYQIVQDTYNSTDYFHIDSASGLILTARMLDHESVQHCTLKVR 1143
Query: 60 ATDRG 64
ATD G
Sbjct: 1144 ATDNG 1148
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFP 57
+ +V A D D G N V Y+L P + F + S +G I +DLD E+ + F
Sbjct: 1611 LTQVRAMDVDWGANGQVTYSLHSDSQPEKVMEAFSIDSNTGWISTLKDLDHETDPMFTFS 1670
Query: 58 VVATDRGK 65
VVA+D G+
Sbjct: 1671 VVASDLGE 1678
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N + Y+L P N F++ SGE+ LD E +Y A
Sbjct: 1826 ILKVSAKDADIGPNGDIRYSL-YGPGN-NEFFLDPESGELKTLAPLDRERVPAYSLIARA 1883
Query: 61 TDRG 64
TD G
Sbjct: 1884 TDGG 1887
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA + YT+ E+ + N F ++ V G I ++++ D + + V
Sbjct: 363 VLQVTALDKDKGENAELMYTI-EAGNTGNTFKIEPVLGIITVSKEPDMTTMGQFVLSVKV 421
Query: 61 TDRG 64
TD+G
Sbjct: 422 TDQG 425
>gi|68532427|gb|AAH98144.1| PCDHB14 protein, partial [Homo sapiens]
Length = 797
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA VNY+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 472 VSATDRDSGTNAQVNYSL--LPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFR 529
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 530 VGATDRG 536
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMK-------SVSGEICIAQDLDFESRSS 53
L SA D D G N++ NYT+ S +HFY+K + E+ + + LD+E +
Sbjct: 151 FLMESAQDLDVGSNSLQNYTI----SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAE 206
Query: 54 YEFPVVATDRG 64
+ A D G
Sbjct: 207 LRLTLTAVDGG 217
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+SA D D G ++YT + F + +SGE+ + LDFE SY + ATD
Sbjct: 263 ISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQSYTINIQATD 322
Query: 63 RG 64
G
Sbjct: 323 GG 324
>gi|148664779|gb|EDK97195.1| mCG140835 [Mus musculus]
Length = 798
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G+N + Y+ SP+ + F + S SGE+ LDFE YE PV
Sbjct: 261 VINLNATDPDEGINGDIIYSFRRPVSPAVVHAFNIDSNSGEVRTKGLLDFEEIKLYEIPV 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 EAVDKG 326
>gi|426364793|ref|XP_004049479.1| PREDICTED: protocadherin-15-like, partial [Gorilla gorilla
gorilla]
Length = 470
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 41 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 96
>gi|351698157|gb|EHB01076.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Heterocephalus
glaber]
Length = 3767
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + S HF + S++GEI + LDFE+ Y + A
Sbjct: 455 VLRVTATDRDKDANGLVHYNIISGNSH-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 513
Query: 61 TDRGK 65
D G+
Sbjct: 514 QDAGR 518
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 771 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 827
Query: 64 G 64
G
Sbjct: 828 G 828
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 871 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 930
Query: 61 TDRG 64
DRG
Sbjct: 931 VDRG 934
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 561 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGSLDRESVEHYFFGVE 618
Query: 60 ATDRG 64
A D G
Sbjct: 619 ARDHG 623
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+ Y V AT
Sbjct: 979 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEACQEYLIVVQAT 1036
>gi|269995989|ref|NP_001019300.2| protocadherin beta-11 precursor [Pan troglodytes]
Length = 797
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA VNY+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVNYSL--LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSA D D G N + YTL + F + SG+I + LDFE+ SY +
Sbjct: 261 ILTVSAWDLDSGTNGEICYTLSHASEDIRKTFEINQKSGDITLTAPLDFETIESYSIIIQ 320
Query: 60 ATDRG 64
ATD G
Sbjct: 321 ATDGG 325
>gi|9256608|ref|NP_061757.1| protocadherin beta-14 precursor [Homo sapiens]
gi|13431380|sp|Q9Y5E9.1|PCDBE_HUMAN RecName: Full=Protocadherin beta-14; Short=PCDH-beta-14; Flags:
Precursor
gi|5457035|gb|AAD43754.1|AF152493_1 protocadherin beta 14 [Homo sapiens]
gi|14009453|gb|AAK51612.1|AF217744_1 protocadherin-beta14 [Homo sapiens]
gi|71043456|gb|AAH99728.1| Protocadherin beta 14 [Homo sapiens]
gi|119582373|gb|EAW61969.1| protocadherin beta 14 [Homo sapiens]
gi|168277588|dbj|BAG10772.1| protocadherin beta 14 precursor [synthetic construct]
Length = 798
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA VNY+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDRDSGTNAQVNYSL--LPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMK-------SVSGEICIAQDLDFESRSS 53
L SA D D G N++ NYT+ S +HFY+K + E+ + + LD+E +
Sbjct: 152 FLMESAQDLDVGSNSLQNYTI----SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAE 207
Query: 54 YEFPVVATDRG 64
+ A D G
Sbjct: 208 LRLTLTAVDGG 218
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+SA D D G ++YT + F + +SGE+ + LDFE SY + ATD
Sbjct: 264 ISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQSYTINIQATD 323
Query: 63 RG 64
G
Sbjct: 324 GG 325
>gi|354500185|ref|XP_003512181.1| PREDICTED: protocadherin beta-15-like [Cricetulus griseus]
Length = 683
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G N V+Y+L S + F + ++SGEI + + LDFE+ SSYE + A+
Sbjct: 252 KVWAKDLDTGTNGEVSYSLLRSSQEMSKTFELNAMSGEIRLIKTLDFETASSYEVDIEAS 311
Query: 62 DRG 64
D G
Sbjct: 312 DGG 314
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P+ + S+ +G++ + LD+E+ + EF
Sbjct: 462 ISATDSDSGSNAHITYSL--LPTHDPQLALSSLISINADNGQLFALRALDYEALQTLEFR 519
Query: 58 VVATDRG 64
V ATD+G
Sbjct: 520 VGATDQG 526
>gi|344238296|gb|EGV94399.1| Protocadherin-3 [Cricetulus griseus]
Length = 840
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G++ V Y+L + + F + V+GEI ++++LDFE + Y + A
Sbjct: 227 VLTVSAMDLDAGIHGNVVYSLFQGGGASQPFAIHGVTGEIRLSKELDFEVTNHYNIEIAA 286
Query: 61 TDRG 64
TD G
Sbjct: 287 TDGG 290
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P+ + S+ +G++ + LD+E+ ++EF
Sbjct: 517 ISATDSDSGSNAHITYSL--LPTHDPQLALSSLISINADNGQLFALRALDYEALQTFEFR 574
Query: 58 VVATDRG 64
V ATD+G
Sbjct: 575 VGATDQG 581
>gi|432879582|ref|XP_004073498.1| PREDICTED: uncharacterized protein LOC101171591 [Oryzias latipes]
Length = 3795
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G NA + Y+ G E S+ T F M +GEI + +DFE YE V
Sbjct: 1792 VIQVNATDLDKGANAEIIYSFGNEVKSKITELFSMNDKTGEITVKGQIDFEKNKIYEIDV 1851
Query: 59 VATDRG 64
A+D+G
Sbjct: 1852 QASDKG 1857
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+L V+A D D G NA+++Y++ N F + S SGE+ + DFES +++F
Sbjct: 2764 VLSVTAHDSDEGSNALISYSILRDRDTDNLFTSFLNVNSESGEVVALKSFDFESVKTFQF 2823
Query: 57 PVVATDRG 64
+VATD G
Sbjct: 2824 HIVATDSG 2831
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G NA + Y+ G E S+ T F M +GEI + +DFE S+E V
Sbjct: 262 VIQVNATDLDKGANAEIVYSFGNEVKSKITELFSMNKKTGEITVKGQIDFEKSKSFEIDV 321
Query: 59 VATDRG 64
A+D G
Sbjct: 322 QASDNG 327
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+V+ASD D G N V Y+ S P F + + +GEI + +D+E R Y+ +
Sbjct: 3269 VLKVNASDLDEGRNGEVVYSFSNSVNPKFLKFFEINANTGEITVIGSIDYEERDKYQIDI 3328
Query: 59 VATDRG 64
A+D+
Sbjct: 3329 QASDKA 3334
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES--PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++VSA+D D N + Y+ G P F + ++G I + +DFE YE +
Sbjct: 2550 VIQVSATDLDESSNGEIVYSFGNDVDPKVRELFDLNGITGVITVIGIIDFEVNDKYELDI 2609
Query: 59 VATDRGKET 67
A+DRG T
Sbjct: 2610 QASDRGAAT 2618
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D G N V Y+ S + F + + +GEI + +D+E + YE +
Sbjct: 1005 VIQVNASDLDDGTNGEVVYSFTNSVNTNILRLFGLNTETGEITVKGQIDYEEKDKYEIEI 1064
Query: 59 VATDRG 64
A+D+G
Sbjct: 1065 QASDKG 1070
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ V A D D G NA+V+Y + + N + S +G+I + DFES +++F
Sbjct: 476 VFSVKAFDRDEGENALVSYGILREINSDNKLSSFLSINSETGDISALKSFDFESVKTFQF 535
Query: 57 PVVATDRG 64
VVATD G
Sbjct: 536 HVVATDSG 543
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ V A D D G NA+V+Y + + N + S +G+I + DFES +++F
Sbjct: 2006 VFSVKAFDRDEGENALVSYGILREMNSDNKLSSFLSINSETGDISALKSFDFESVKTFQF 2065
Query: 57 PVVATDRG 64
VVATD G
Sbjct: 2066 HVVATDSG 2073
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNY---TLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEF 56
+ V A D D NA++ Y T G ++ F + S SGEI + DFES +++F
Sbjct: 1219 VFSVKALDRDQNDNAVIAYHILTDGREDNKLASFLNINSDSGEIVALKSFDFESVKTFQF 1278
Query: 57 PVVATDRG 64
VVATD G
Sbjct: 1279 HVVATDSG 1286
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEF 56
+ + A D D NA + Y + G S+ F + S SGE+ + DFES +++F
Sbjct: 3483 LFSIKAFDHDESENARITYHIVRDGNDNSKLVSFLNINSDSGEVVALKSFDFESVKTFQF 3542
Query: 57 PVVATDRG 64
VVATD G
Sbjct: 3543 YVVATDSG 3550
>gi|11128025|ref|NP_061751.1| protocadherin gamma-C4 isoform 1 precursor [Homo sapiens]
gi|37999827|sp|Q9Y5F7.1|PCDGL_HUMAN RecName: Full=Protocadherin gamma-C4; Short=PCDH-gamma-C4; Flags:
Precursor
gi|62510856|sp|Q5DRA3.1|PCDGL_PANTR RecName: Full=Protocadherin gamma-C4; Short=PCDH-gamma-C4; Flags:
Precursor
gi|5456982|gb|AAD43732.1| protocadherin gamma C4 [Homo sapiens]
gi|119582353|gb|EAW61949.1| hCG1982215, isoform CRA_ab [Homo sapiens]
Length = 938
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|403255734|ref|XP_003920566.1| PREDICTED: protocadherin gamma-C4-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 938
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|380800259|gb|AFE72005.1| protocadherin gamma-C4 isoform 1 precursor, partial [Macaca
mulatta]
Length = 936
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 259 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 318
Query: 59 VATDRG 64
A D G
Sbjct: 319 RARDGG 324
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 475 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 534
Query: 60 ATDRGK 65
A DRG
Sbjct: 535 ARDRGN 540
>gi|301629645|ref|XP_002943948.1| PREDICTED: protocadherin-16-like, partial [Xenopus (Silurana)
tropicalis]
Length = 1933
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A DPD G+N V Y+ +S + + F + +G I A LD E S V+A
Sbjct: 825 LIQVLAEDPDQGLNGQVTYSFDQSQAMKDLFRIDPQTGAITTAAILDREIWSQAHLVVIA 884
Query: 61 TDRG 64
TDRG
Sbjct: 885 TDRG 888
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RVSA+D D G N V+Y L P + F++ +GE+ + LD E +++Y+ V+A D
Sbjct: 260 RVSATDRDAGPNGRVSYRL---PPLESDFHINPHTGELSTRRVLDRELQATYQLLVIAQD 316
Query: 63 RG 64
G
Sbjct: 317 GG 318
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A D D G N +V+Y++ S + F + +G I +A+ LD E ++ + V+A
Sbjct: 1252 VLRVLAQDSDSGSNGLVHYSI-TSGDESRLFQINEATGAIRLARHLDRERQALHALVVLA 1310
Query: 61 TD 62
D
Sbjct: 1311 LD 1312
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A DPD G N V Y L + F + SG + + + LD E+ Y VVA D G
Sbjct: 604 AQDPDLGDNGKVGYQLVGG-NDEGKFQLHPSSGALTVVRTLDRETTEGYNLTVVAMDHG 661
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+ +D D G ++YTL + F M G+I +++ LD+E R SY V
Sbjct: 930 ILQVTGNDVDSG--PALSYTLLVDGAMEGAFTMLRYGGQIWLSRQLDYEDRKSYSLTVQT 987
Query: 61 TD 62
+D
Sbjct: 988 SD 989
>gi|195591705|ref|XP_002085579.1| GD14851 [Drosophila simulans]
gi|194197588|gb|EDX11164.1| GD14851 [Drosophila simulans]
Length = 2585
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + D D GVN MV Y + + ++ N F + S +G I + + LD+E+ + Y F V +
Sbjct: 54 LTLQVKDADVGVNGMVEYHIVDDLAK-NFFKIDSTTGAIELLRQLDYETNAGYTFDVTVS 112
Query: 62 DRGK 65
D GK
Sbjct: 113 DMGK 116
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D G N + Y L ++ + N F + SG I + LD E +S Y F V+
Sbjct: 1088 LVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 1147
Query: 60 ATDRG 64
A D G
Sbjct: 1148 AADNG 1152
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D VN +V Y + E F + +G I +++ LD E+ S Y + A
Sbjct: 1606 ILDVKATDEDSDVNGLVTYNI-ERGDNIGQFSVDPKNGTISVSRPLDRETISHYTLEIQA 1664
Query: 61 TDRG 64
D+G
Sbjct: 1665 CDQG 1668
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+++A+D D G NA ++Y + + N FY+ G + + LD+E + V
Sbjct: 569 ILKINATDKDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLKTPLDYEQIKYHHIVV 628
Query: 59 VATDRG 64
D G
Sbjct: 629 NVKDHG 634
>gi|109089755|ref|XP_001098443.1| PREDICTED: protocadherin-15 isoform 1 [Macaca mulatta]
Length = 1953
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|195383702|ref|XP_002050565.1| GJ22222 [Drosophila virilis]
gi|194145362|gb|EDW61758.1| GJ22222 [Drosophila virilis]
Length = 3596
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSASDPD G+N + Y L + F + SG I + LD ES + Y +A
Sbjct: 1026 VIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTNKGLDRESVAIYHLTAIA 1085
Query: 61 TDRG 64
D+G
Sbjct: 1086 VDKG 1089
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSA+D D G+NA + Y+L E S + F + +G I + LD E+ S Y
Sbjct: 916 VLVVSATDSDVGINAQITYSLNEESINGLSSPDPFTINPQTGAIITSAPLDRETTSGYLL 975
Query: 57 PVVATDRG 64
V A D G
Sbjct: 976 TVTAKDGG 983
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMK--SVSGEICIAQDLDFESRSSYEFPV 58
++RV A D D G NA ++Y++ E R ++F + S +G + + LD E +S + F V
Sbjct: 708 IIRVQAYDSDEGANAEISYSISE---RDDNFPLAVDSRTGWVQTIKPLDREEQSRFAFQV 764
Query: 59 VATDRG 64
VA D G
Sbjct: 765 VAKDGG 770
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 3 RVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ A+D D G NA + Y + G + S+ F + S+SG++ + + LD+ES SY + A
Sbjct: 605 HIRATDADQGNNAAIRYAIIGGNTQSQ---FSIDSMSGDVSLVKPLDYESVRSYRLVIRA 661
Query: 61 TDRGKETQ 68
D G ++
Sbjct: 662 QDGGSPSR 669
>gi|21426883|ref|NP_619604.1| protocadherin alpha-13 precursor [Mus musculus]
gi|13876256|gb|AAK26048.1| protocadherin alpha 12 [Mus musculus]
Length = 950
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G+N + Y+ SP+ + F + S SGE+ LDFE YE PV
Sbjct: 261 VINLNATDPDEGINGDIIYSFRRPVSPAVVHAFNIDSNSGEVRTKGLLDFEEIKLYEIPV 320
Query: 59 VATDRG 64
A D+G
Sbjct: 321 EAVDKG 326
>gi|326673317|ref|XP_003199836.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 795
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G N + Y+ G+S S F + +++GEI + LD+E + SYE +
Sbjct: 263 VIQVNATDIDEGPNGEIVYSFGKSVSSKVQKLFDINTITGEITVKGLLDYEGKDSYEIDI 322
Query: 59 VATDRG 64
A+D+G
Sbjct: 323 QASDKG 328
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY----MKSVSGEICIAQDLDFESRSSYEF 56
+ VSASD D G N+ V+Y + N F + S +GEI + DFE+ +++F
Sbjct: 477 LFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFETSKTFQF 536
Query: 57 PVVATDRG 64
++ATD G
Sbjct: 537 HILATDSG 544
>gi|297301376|ref|XP_002805776.1| PREDICTED: protocadherin-15 isoform 7 [Macaca mulatta]
Length = 1913
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 701 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 756
>gi|291387490|ref|XP_002710173.1| PREDICTED: protocadherin beta 9 [Oryctolagus cuniculus]
Length = 802
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV---SGEICIAQDLDFESRSSYEFPVVA 60
VSASD D G NA V Y+L P + + + SV SG++ + LD+E+ ++EF V A
Sbjct: 473 VSASDRDAGANAQVTYSLLPLPQQPDVAALVSVHADSGQLYALRALDYEALRAFEFGVRA 532
Query: 61 TDRG 64
DRG
Sbjct: 533 ADRG 536
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+ +VSA D D GVN V+Y+ + S F + SGEI + LD+E SY V
Sbjct: 261 ITKVSAGDADSGVNGEVSYSFFDVSEDIRTTFQINPFSGEIILGALLDYEIVKSYRINVQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AMDGG 325
>gi|127139226|ref|NP_001076023.1| protocadherin gamma-C4 [Pan troglodytes]
Length = 938
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|119574536|gb|EAW54151.1| protocadherin 15, isoform CRA_a [Homo sapiens]
Length = 1401
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|432099154|gb|ELK28527.1| Protocadherin-15 [Myotis davidii]
Length = 1597
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V Y+LG NH + + +G I L+ E R YE VVATD
Sbjct: 529 QVRATDPDAGINGQVYYSLG----NFNHLFRITSNGSIYTTVKLNREVRDYYELLVVATD 584
>gi|348583469|ref|XP_003477495.1| PREDICTED: protocadherin-20-like [Cavia porcellus]
Length = 952
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ A+D D G V+Y LG P ++F + SV+G + ++ LD E + Y + V A
Sbjct: 555 LTKLYATDADSGERGQVSYFLG--PDAPSYFSLDSVTGILTVSTQLDREEKEKYRYTVKA 612
Query: 61 TDRGK 65
DRGK
Sbjct: 613 VDRGK 617
>gi|344253926|gb|EGW10030.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Cricetulus griseus]
Length = 2335
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y + A
Sbjct: 252 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRIRA 310
Query: 61 TDRGK 65
D G+
Sbjct: 311 QDGGR 315
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + ++G + A++LD E++S++ F V A
Sbjct: 37 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGTVTTAEELDRETKSTHVFRVTAQ 96
Query: 62 DRG 64
D G
Sbjct: 97 DHG 99
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 800 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQAT 857
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 692 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYA 751
Query: 61 TDRG 64
D+G
Sbjct: 752 VDKG 755
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 589 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 645
Query: 61 TDRG 64
D G
Sbjct: 646 RDNG 649
>gi|327270445|ref|XP_003220000.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
gi|262263283|tpg|DAA06584.1| TPA_inf: protocadherin beta 7 [Anolis carolinensis]
Length = 807
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV A D D G NA + Y+ + P F++ V+GEI + ++D+E +YE + AT
Sbjct: 259 RVEARDLDFGSNAQITYSFYQIPEDIQSLFHLNDVTGEITVLGEIDYEKEINYEMTIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|260820024|ref|XP_002605335.1| hypothetical protein BRAFLDRAFT_194831 [Branchiostoma floridae]
gi|229290668|gb|EEN61345.1| hypothetical protein BRAFLDRAFT_194831 [Branchiostoma floridae]
Length = 571
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 2 LRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ VSASD D G NA + + L GE +N F + VSG + + LD+E +S+Y+ + A
Sbjct: 455 ITVSASDDDAGTNAEIGFVLQGEG---SNLFSIDDVSGVVTLTGRLDYEKKSNYDLTITA 511
Query: 61 TDRG 64
D G
Sbjct: 512 MDNG 515
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G N V Y + F + +GE+ IA LD E++ Y+ + A+D
Sbjct: 146 VEAVDPDEGTNGNVFYEIRSGAE--GRFTVNPRTGEVKIAGKLDRETKDFYQMEIFASDG 203
Query: 64 GK 65
G
Sbjct: 204 GN 205
>gi|194226506|ref|XP_001916261.1| PREDICTED: protocadherin Fat 1 [Equus caballus]
Length = 4588
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDLDSGTNGQVMYSLDQSQSVEVLESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKVQ 2897
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAYDPDLGQSSQVRYSLLDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG + + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGAVVLTGRLDYAETMLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 VDRG 228
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + + F + + G I A++LD ++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGHSFTIDPILGSIKTAKELDRSNQVEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKISYSLINSAD--GQFSINELSGIIQLEKPLDREVQAVYTLTLKA 3201
Query: 61 TDRG 64
D G
Sbjct: 3202 VDHG 3205
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G I I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+VSA+D D NA + YTL G + F + +GE+ LD E ++ Y V
Sbjct: 3042 ILQVSATDADIRSNAEITYTLFGPGAEK---FKLNPDTGELKTLVPLDREEQAVYNLLVK 3098
Query: 60 ATDRG 64
ATD G
Sbjct: 3099 ATDGG 3103
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D N ++Y + G +HF++ S +G I + + LD+E ++ V
Sbjct: 2302 VVQVKATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHKIFVR 2361
Query: 60 ATDRG 64
A D G
Sbjct: 2362 AVDSG 2366
>gi|116283974|gb|AAH52388.1| Pcdh8 protein [Mus musculus]
Length = 966
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
>gi|344265048|ref|XP_003404599.1| PREDICTED: protocadherin alpha-C2 [Loxodonta africana]
Length = 1006
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N + Y+L S F + + +GE+ ++ LD+E SSY+ V
Sbjct: 275 VVKLNASDPDEGSNGQLRYSLSSYTSDRERQLFSIDASTGEVRVSGALDYEEASSYQIYV 334
Query: 59 VATDRG 64
ATDRG
Sbjct: 335 QATDRG 340
>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
Length = 3590
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSASDPD G+N + Y L + F + SG I + LD ES + Y +A
Sbjct: 1020 VIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTNKGLDRESVAIYHLTAIA 1079
Query: 61 TDRG 64
D+G
Sbjct: 1080 VDKG 1083
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSA+D D G+NA + Y+L E + F + +G I LD E+ S Y
Sbjct: 910 VLVVSATDSDVGINAQITYSLNEESINGLGTADPFSINQQTGAIVTNAPLDRETTSGYLL 969
Query: 57 PVVATDRG 64
V A D G
Sbjct: 970 TVTAKDGG 977
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+ A+D D G NA + Y + +++ F + S+SG++ + + LD+ES SY + A D
Sbjct: 599 HIRATDADQGNNAAIRYAIIGGNTQS-QFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQD 657
Query: 63 RGKETQ 68
G ++
Sbjct: 658 GGSPSR 663
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMK--SVSGEICIAQDLDFESRSSYEFPV 58
++RV A D D G NA ++Y++ E R ++F + +G + + LD E +S + F V
Sbjct: 702 IIRVQAYDSDEGANAEISYSISE---RDDNFPLAVDPRTGWVQTIKQLDREEQSRFTFQV 758
Query: 59 VATDRG 64
VA D G
Sbjct: 759 VAKDGG 764
>gi|449475293|ref|XP_004175471.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-9-like
[Taeniopygia guttata]
Length = 986
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ +SA+DPD G+N+ + Y G S F + GEI + LD+E SYE PV
Sbjct: 247 LVTLSATDPDDGINSDIIYLFGRRVSTKVKEMFTIDENKGEIRLQGKLDYEETDSYEIPV 306
Query: 59 VATDRG 64
A D+G
Sbjct: 307 EARDKG 312
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++A+D D G N ++Y+L R + F + +GEI + +DLDFE S Y V
Sbjct: 689 VIKLNATDLDEGSNRNISYSLETLFPQDRKDVFGIDRRTGEIRLLKDLDFEDVSLYRLQV 748
Query: 59 VATDRG 64
ATD+G
Sbjct: 749 GATDQG 754
>gi|440909686|gb|ELR59571.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Bos grunniens mutus]
Length = 2919
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 415 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 473
Query: 61 TDRGK 65
D G+
Sbjct: 474 QDGGR 478
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + ++G + A++LD E++S++ F V A
Sbjct: 200 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 259
Query: 62 DRG 64
D G
Sbjct: 260 DHG 262
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 939 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 996
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 831 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 890
Query: 61 TDRG 64
D+G
Sbjct: 891 VDKG 894
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 728 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 784
Query: 61 TDRG 64
D G
Sbjct: 785 RDNG 788
>gi|432103917|gb|ELK30750.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Myotis davidii]
Length = 2668
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 199 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 257
Query: 61 TDRGK 65
D G+
Sbjct: 258 QDGGR 262
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 723 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 780
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 615 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 674
Query: 61 TDRG 64
D+G
Sbjct: 675 VDKG 678
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 26 SRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
SR+NHF+ + ++G + A++LD E++S++ F V A D G
Sbjct: 7 SRSNHFFSLDPITGAVTTAEELDRETKSTHVFRVTAQDHG 46
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 512 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 568
Query: 61 TDRG 64
D G
Sbjct: 569 RDNG 572
>gi|197100101|ref|NP_001124892.1| protocadherin gamma-C5 precursor [Pongo abelii]
gi|55726265|emb|CAH89904.1| hypothetical protein [Pongo abelii]
Length = 945
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESRFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 KARDQGQ 327
>gi|397473819|ref|XP_003808397.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pan
paniscus]
Length = 3150
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 647 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 705
Query: 61 TDRGK 65
D G+
Sbjct: 706 QDGGR 710
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 1171 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 1228
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+N F+ + V+G + A++LD E++S++ F V A
Sbjct: 432 LRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTTAEELDRETKSTHVFRVTAQ 491
Query: 62 DRG 64
D G
Sbjct: 492 DHG 494
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 1063 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 1122
Query: 61 TDRG 64
D+G
Sbjct: 1123 VDKG 1126
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 960 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 1016
Query: 61 TDRG 64
D G
Sbjct: 1017 RDNG 1020
>gi|296489410|tpg|DAA31523.1| TPA: cadherin, EGF LAG seven-pass G-type receptor 2 [Bos taurus]
Length = 2920
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 415 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 473
Query: 61 TDRGK 65
D G+
Sbjct: 474 QDGGR 478
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + ++G + A++LD E++S++ F V A
Sbjct: 200 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 259
Query: 62 DRG 64
D G
Sbjct: 260 DHG 262
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+ R Y + AT
Sbjct: 939 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYXDRPEYVLVIQAT 996
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 831 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 890
Query: 61 TDRG 64
D+G
Sbjct: 891 VDKG 894
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 728 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 784
Query: 61 TDRG 64
D G
Sbjct: 785 RDNG 788
>gi|47227082|emb|CAG00444.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2270
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A DPD G N V+Y+L S +R F + ++GE+ A L + RS Y F V A D
Sbjct: 708 VTAKDPDEGENGTVHYSL--SGARAERFTLNPMTGELKAASPLRWAERSEYTFMVTAADH 765
Query: 64 G 64
G
Sbjct: 766 G 766
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDF-ESRSSYEFP 57
+ +VSA+D D G V Y LG T + F + SG++C + LD E ++
Sbjct: 19 LAQVSATDEDRGSFGAVTYALGSPSGNTPPDQFTIDKGSGQLCTSTPLDRDEGADKFDLT 78
Query: 58 VVATDRG 64
V ATD G
Sbjct: 79 VTATDGG 85
>gi|355691687|gb|EHH26872.1| hypothetical protein EGK_16950 [Macaca mulatta]
Length = 732
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA+V Y+L PS+ H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDRDSGTNALVTYSL--LPSQDPHLPLASLVSINTDNGHLFALRSLDYEALQEFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ +SA D D G ++YT + F + +SGE+ + LDFE SY +
Sbjct: 261 IVTISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQSYTINIQ 320
Query: 60 ATDRG 64
ATD G
Sbjct: 321 ATDGG 325
>gi|348514377|ref|XP_003444717.1| PREDICTED: protocadherin gamma-A4-like [Oreochromis niloticus]
Length = 597
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV-SGEICIAQDLDFESRSSYEFPVVATD 62
VSA+D D GVN V Y++ T + +V +GEI +A LDFE +Y+ V A+D
Sbjct: 259 VSANDGDKGVNGEVTYSIAHVAKETKQLFDVNVKTGEIKVAGKLDFEKSKTYQLNVQASD 318
Query: 63 RG 64
G
Sbjct: 319 HG 320
>gi|338716526|ref|XP_001501880.3| PREDICTED: protocadherin-15 [Equus caballus]
Length = 1548
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 348 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 403
>gi|300793712|ref|NP_001179860.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Bos
taurus]
Length = 2920
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 415 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 473
Query: 61 TDRGK 65
D G+
Sbjct: 474 QDGGR 478
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + ++G + A++LD E++S++ F V A
Sbjct: 200 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 259
Query: 62 DRG 64
D G
Sbjct: 260 DHG 262
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 939 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 996
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 831 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 890
Query: 61 TDRG 64
D+G
Sbjct: 891 VDKG 894
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 728 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 784
Query: 61 TDRG 64
D G
Sbjct: 785 RDNG 788
>gi|73959343|ref|XP_537042.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 isoform 1
[Canis lupus familiaris]
Length = 2926
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 421 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 479
Query: 61 TDRGK 65
D G+
Sbjct: 480 QDGGR 484
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 945 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQAT 1002
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 837 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYA 896
Query: 61 TDRG 64
D+G
Sbjct: 897 VDKG 900
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+ F+ + ++G + A++LD E++S++ F V A
Sbjct: 206 LRAIDPDEGEAGRLEYTMDALFDSRSKQFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 265
Query: 62 DRG 64
D G
Sbjct: 266 DHG 268
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 734 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 790
Query: 61 TDRG 64
D G
Sbjct: 791 RDNG 794
>gi|410967896|ref|XP_003990449.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Felis catus]
Length = 2931
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 425 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 483
Query: 61 TDRGK 65
D G+
Sbjct: 484 QDGGR 488
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 949 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQAT 1006
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+ HF+ + ++G + A++LD E++S++ F V A
Sbjct: 210 LRAIDPDEGEAGRLEYTMDALFDSRSKHFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 269
Query: 62 DRG 64
D G
Sbjct: 270 DHG 272
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 841 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYA 900
Query: 61 TDRG 64
D+G
Sbjct: 901 VDKG 904
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 738 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 794
Query: 61 TDRG 64
D G
Sbjct: 795 RDNG 798
>gi|345311428|ref|XP_001516332.2| PREDICTED: protocadherin gamma-A10-like, partial [Ornithorhynchus
anatinus]
Length = 807
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ V+A+DPD GVN V Y+ + +T+ F + S +GE+ I +LDFE YE +
Sbjct: 261 VVTVNATDPDEGVNGHVTYSFRKITDKTSRIFQLNSSTGEVSILTNLDFEESEFYEMEIQ 320
Query: 60 ATDRG 64
+ D G
Sbjct: 321 SQDGG 325
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 3 RVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
RV+A DPD NA V Y++ G+ P +++ + S +G + + D+E + V
Sbjct: 473 RVTARDPDSEENARVTYSISEEPGQGPPLSSYLSINSETGVLYALRSFDYEQFRELQLLV 532
Query: 59 VATDRGKET 67
A D G T
Sbjct: 533 TARDGGTPT 541
>gi|395821589|ref|XP_003784120.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Otolemur
garnettii]
Length = 2919
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 416 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 474
Query: 61 TDRGK 65
D G+
Sbjct: 475 QDGGR 479
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 940 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 997
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + ++G + A++LD E+++++ F V
Sbjct: 201 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDRETKNTHVFRVTVQ 260
Query: 62 DRG 64
D G
Sbjct: 261 DHG 263
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 832 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYA 891
Query: 61 TDRG 64
D+G
Sbjct: 892 VDKG 895
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 729 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 785
Query: 61 TDRG 64
D G
Sbjct: 786 RDNG 789
>gi|354500158|ref|XP_003512169.1| PREDICTED: protocadherin-3-like isoform 2 [Cricetulus griseus]
Length = 796
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G++ V Y+L + + F + V+GEI +++ LDFE + Y + A
Sbjct: 261 VLTVSAMDLDAGIHGNVVYSLFQGGGASQPFVIDGVTGEIRLSKQLDFEVTNHYNIEIAA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDGG 324
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P+ + S+ +G++ + LD+E+ ++EF
Sbjct: 472 ISATDSDSGSNAHITYSL--LPTHDPQLALSSLISINADNGQLFALRALDYEALQTFEFR 529
Query: 58 VVATDRG 64
V ATD+G
Sbjct: 530 VGATDQG 536
>gi|350581232|ref|XP_003480993.1| PREDICTED: protocadherin gamma-B7-like [Sus scrofa]
Length = 809
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYT-LGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+VSA+D D GVNA + Y+ LG + F + S +G I Q LD+E Y V
Sbjct: 261 VLKVSATDLDEGVNAEITYSFLGVGDTSKYEFSLDSATGNIITHQALDYEDVERYTIDVE 320
Query: 60 ATDRG 64
A DRG
Sbjct: 321 AKDRG 325
>gi|270002748|gb|EEZ99195.1| cadherin [Tribolium castaneum]
Length = 4637
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A+D D G+N + Y +S NHF M S SG + +A+ LD E R+ Y V A D
Sbjct: 3143 KIHATDADIGINRKIKYAFIDS--FNNHFKMASDSGIVTLAKPLDREIRAVYNLTVQAVD 3200
Query: 63 RG 64
+G
Sbjct: 3201 QG 3202
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D G+N ++Y++ +S + + +FY+ G + + Q LD E SS+ F VV
Sbjct: 2309 VLTVIANDNDTGINKKISYSIQNDSSNSSEYFYIDENEGVVYLKQALDHEEASSHHFIVV 2368
Query: 60 ATDRG 64
A D G
Sbjct: 2369 AKDLG 2373
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASDPD G + V Y L +S S F + +SG I + LDFE R + A+D+
Sbjct: 980 VTASDPDLGSDGEVVYFLEDSDSDGT-FKIDRLSGTIRTTKPLDFEERQVHSLIAFASDK 1038
Query: 64 G 64
G
Sbjct: 1039 G 1039
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R +A+D D G NA V Y+L + T F + +G + ++ LD E + YE + A
Sbjct: 869 IFRANATDADAGDNAKVTYSL---ITDTRDFAVDRTTGVLAVSNTLDRERQDLYELRIRA 925
Query: 61 TDRG 64
TD G
Sbjct: 926 TDGG 929
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES-PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G N+ V Y+ N F + S +G I LD E++ Y+F V
Sbjct: 2829 ILKVVAHDEDQGANSEVRYSFSHDLGDMMNIFAIDSHTGWISTLVKLDKEAKMEYKFYVT 2888
Query: 60 ATDRG 64
ATD G
Sbjct: 2889 ATDNG 2893
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N + Y+ E T+ F + +SG I +++ L + + +E V+
Sbjct: 176 ILKVVAEDADLGRNGEIYYSFAE---ETDKFAIHPMSGVISLSRPLRYNEGTYHELTVLG 232
Query: 61 TDRG 64
DRG
Sbjct: 233 QDRG 236
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D N V Y++ R F + SG + +A++LD E+ S+Y V+A
Sbjct: 3350 ILQVIATDLDSDRNGKVTYSIIRGDDR-EQFEIDPDSGYVSVAEELDRETTSNYVLEVLA 3408
Query: 61 TDRG 64
D G
Sbjct: 3409 RDNG 3412
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR A D D G NA + Y++ S + N F + G I +A++LD + S Y + A
Sbjct: 1641 VLRAFAVDHDKGENARITYSI-VSGNFGNVFAIDPELGIISVARELDMTANSEYMLRIKA 1699
Query: 61 TDRGK 65
D G+
Sbjct: 1700 VDHGQ 1704
>gi|432896618|ref|XP_004076349.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3296
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RVSA+D D G+NA + Y L + HF + S +GEI LD E +SSY+ VV D
Sbjct: 1134 RVSATDRDAGLNARLTYRLLHA---DKHFQINSQTGEISTRLALDREQQSSYQLFVVVQD 1190
Query: 63 RG 64
G
Sbjct: 1191 GG 1192
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A DPD G N V Y+L S SR F + +GE+ A L + R+ Y F + A D
Sbjct: 1242 VAAKDPDEGENGTVYYSL--SGSRVERFSLNPNTGELKTASPLRWAERAEYTFTLTAADH 1299
Query: 64 G 64
G
Sbjct: 1300 G 1300
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G N V Y+L + F + ++G I A LDFES + V+A
Sbjct: 489 VLQVTARDKDQGPNGDVRYSLLKG---KKWFSIDPITGIITTATALDFESEPAPSVTVIA 545
Query: 61 TDRGK 65
TD G+
Sbjct: 546 TDGGR 550
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R++A+DPD NA V YT+ S N F + +G + + + LD E +S++ + A
Sbjct: 2610 IIRLTATDPDSTPNAEVQYTI-SSGDEMNLFSIDQWTGALRLQRALDREHQSTHVVIIQA 2668
Query: 61 TD 62
TD
Sbjct: 2669 TD 2670
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
R+S +DPD G A VN +L + S+ I + Q LD E R SY+ V+ATD
Sbjct: 385 RISVTDPDYGEYANVNVSLEGGDGKFALTTKDSIIYLIYVDQVLDREERDSYDLRVMATD 444
Query: 63 RG 64
G
Sbjct: 445 SG 446
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A+DPD G + Y + F + S +G + + LD E + Y VVA DR
Sbjct: 1771 VKATDPDSGPGGELEYKIAAG-DPDGDFQLHSRTGALSTSHGLDREKKPKYTLEVVAVDR 1829
Query: 64 G 64
G
Sbjct: 1830 G 1830
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D G+N + Y L + F + +G I A LD E +SY F V A
Sbjct: 1873 VLQVSATDVDEGLNGKILYFLSQEAD--GAFAVDEDTGRITTAAPLDREKLASYNFRVFA 1930
Query: 61 TD 62
D
Sbjct: 1931 VD 1932
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y++ +S S + F + V+G I +D E + + V A
Sbjct: 2183 IIQVVAEDVDQGQNGQVTYSI-QSSSMSGLFKIDPVTGSITTTAIMDREIFTQTKLVVTA 2241
Query: 61 TDRG 64
TDRG
Sbjct: 2242 TDRG 2245
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A D D G N V+Y + +S + F + +G + I + LD E + + +VA
Sbjct: 1562 ILHVMAHDADEGENGRVSYRI-QSGNNAGRFSLSPNTGSLSILKALDREEQEVFNLTIVA 1620
Query: 61 TDRG 64
D G
Sbjct: 1621 EDHG 1624
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL------GESPSRTNHFYMKSVSGEICIAQDLDFESRSSY 54
+ R+ A+D D G N +++ L G S RT F + SGE+ + L ++S Y
Sbjct: 908 IYRIQATDKDSGHNGQLSFDLISAGAAGSSGQRT--FGIDRGSGEVRLIGSLSYDSVPRY 965
Query: 55 EFPVVATDRG 64
+ V+A D G
Sbjct: 966 DLQVIAKDGG 975
>gi|357614378|gb|EHJ69045.1| fat protein [Danaus plexippus]
Length = 1382
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++ A+D D G+N + Y++ S +R F++ S SGE+ + + LD+E +SY + A
Sbjct: 983 IIQFHANDADLGINNELQYSI-TSGNRKETFFIDSYSGELFLHKHLDYEDLTSYVLNITA 1041
Query: 61 TDRGK 65
TD G
Sbjct: 1042 TDNGN 1046
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L ++ASD D G N V+Y L + R N F + ++G++ +LD E YE V
Sbjct: 556 ILILTASDYDQGTNGSVSYYLSSNIERKYPNTFMLDPITGQLSAVTELDRERIPLYEIQV 615
Query: 59 VATDRGKETQ 68
+A D+G Q
Sbjct: 616 IAKDQGYRPQ 625
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTL--GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++RV +SD D G+N V Y L G+ + F + +G++ I + LD ES Y V
Sbjct: 877 IMRVYSSDADEGLNGDVYYKLIGGDDLGK---FVLDEATGQLFINKPLDRESIDHYVLTV 933
Query: 59 VATDRGKETQ 68
+A D G+ T+
Sbjct: 934 IAHDSGQTTR 943
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSR-TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ V+A DPD G N V Y++ + PS HF + +V+G I +D E ++ V
Sbjct: 1088 IVTVTAEDPDSGWNGKVYYSITHQDPSNGKRHFAINNVTGVIYTLLPIDREIIDTFRITV 1147
Query: 59 VATDRGK 65
VA D+ +
Sbjct: 1148 VACDKAE 1154
>gi|327270315|ref|XP_003219935.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
gi|262263288|tpg|DAA06588.1| TPA_inf: protocadherin beta 11 [Anolis carolinensis]
Length = 807
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G N+ + Y+ P + N F + ++GEI ++ +DFE +SY+ + AT
Sbjct: 259 KVEARDLDFGSNSKITYSFHRVPEKIRNLFNLNEMTGEITVSGKIDFEKETSYDMNIKAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|194390076|dbj|BAG60554.1| unnamed protein product [Homo sapiens]
Length = 645
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA VNY+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 320 VSATDRDSGTNAQVNYSL--LPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFR 377
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 378 VGATDRG 384
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMK-------SVSGEICIAQDLDFESRSSYEFP 57
SA D D G N++ NYT+ S +HFY+K + E+ + + LD+E +
Sbjct: 3 SAQDLDVGSNSLQNYTI----SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLT 58
Query: 58 VVATDRG 64
+ A D G
Sbjct: 59 LTAVDGG 65
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+SA D D G ++YT + F + +SGE+ + LDFE SY + ATD
Sbjct: 111 ISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQSYTINIQATD 170
Query: 63 RG 64
G
Sbjct: 171 GG 172
>gi|71989522|ref|NP_497641.2| Protein CDH-1 [Caenorhabditis elegans]
gi|373220104|emb|CCD72204.1| Protein CDH-1 [Caenorhabditis elegans]
Length = 2779
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A++ CG + + Y+L ++ H + ++SG +CI + DFE + SY+ V+A
Sbjct: 559 LVKVVANNSQCGNSKRIRYSLQ---NQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIA 615
Query: 61 TDRGKET 67
T+ ET
Sbjct: 616 TNANSET 622
>gi|311271580|ref|XP_003133187.1| PREDICTED: protocadherin-15 isoform 12 [Sus scrofa]
Length = 1925
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 771
>gi|297664216|ref|XP_002810567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pongo
abelii]
Length = 2958
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 453 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 511
Query: 61 TDRGK 65
D G+
Sbjct: 512 QDGGR 516
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 977 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 1034
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+N F+ + ++G + A++LD E++S++ F V A
Sbjct: 238 LRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 297
Query: 62 DRG 64
D G
Sbjct: 298 DHG 300
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 869 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 928
Query: 61 TDRG 64
D+G
Sbjct: 929 VDKG 932
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 766 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 822
Query: 61 TDRG 64
D G
Sbjct: 823 RDNG 826
>gi|426330697|ref|XP_004026343.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2, partial
[Gorilla gorilla gorilla]
Length = 2911
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 406 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 464
Query: 61 TDRGK 65
D G+
Sbjct: 465 QDGGR 469
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 930 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 987
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+N F+ + ++G + A++LD E++S++ F V A
Sbjct: 191 LRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 250
Query: 62 DRG 64
D G
Sbjct: 251 DHG 253
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 822 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 881
Query: 61 TDRG 64
D+G
Sbjct: 882 VDKG 885
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 719 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 775
Query: 61 TDRG 64
D G
Sbjct: 776 RDNG 779
>gi|410965846|ref|XP_003989451.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1 [Felis catus]
Length = 2896
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV ASD D G NA ++Y++ S + FY+ S+SG + + LDFE+ Y + A
Sbjct: 331 VLRVQASDRDQGQNAAIHYSI-VSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKA 389
Query: 61 TDRGK 65
D G+
Sbjct: 390 QDGGR 394
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D G N + YT FY++ SG I + LD E+ + Y +A
Sbjct: 765 VLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYNLRALA 824
Query: 61 TDRG 64
DRG
Sbjct: 825 VDRG 828
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
R+ A+DPD G NA + Y + E + F + +SG++ +LDFE R Y V AT
Sbjct: 874 RIRANDPDEGPNAQIMYQIVEG-NVPEVFQLDLLSGDLRALVELDFEVRREYVLVVQAT 931
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D G NA + Y L E P F + +G + +LD+E +++Y + A D
Sbjct: 665 IGATDEDTGENARITYVL-EDP--VPQFRIDPDTGTVYTMTELDYEDQAAYTLAITARDN 721
Query: 64 G 64
G
Sbjct: 722 G 722
>gi|403284522|ref|XP_003933617.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2, partial [Saimiri boliviensis boliviensis]
Length = 2897
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 393 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 451
Query: 61 TDRGK 65
D G+
Sbjct: 452 QDGGR 456
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 917 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 974
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+N F+ + ++G + A++LD E++S++ F V A
Sbjct: 178 LRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 237
Query: 62 DRG 64
D G
Sbjct: 238 DHG 240
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 809 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 868
Query: 61 TDRG 64
D+G
Sbjct: 869 VDKG 872
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 706 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 762
Query: 61 TDRG 64
D G
Sbjct: 763 RDNG 766
>gi|390466328|ref|XP_002751246.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Callithrix jacchus]
Length = 2871
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 368 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 426
Query: 61 TDRGK 65
D G+
Sbjct: 427 QDGGR 431
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 892 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 949
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+N F+ + ++G + A++LD E++S++ F V A
Sbjct: 153 LRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 212
Query: 62 DRG 64
D G
Sbjct: 213 DHG 215
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 784 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 843
Query: 61 TDRG 64
D+G
Sbjct: 844 VDKG 847
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 681 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 737
Query: 61 TDRG 64
D G
Sbjct: 738 RDNG 741
>gi|301767670|ref|XP_002919249.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2-like [Ailuropoda melanoleuca]
Length = 2924
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 419 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 477
Query: 61 TDRGK 65
D G+
Sbjct: 478 QDGGR 482
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 943 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQAT 1000
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+ HF+ + ++G + A++LD E++S++ F V A
Sbjct: 204 LRAIDPDEGEAGRLEYTMDALFDSRSKHFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 263
Query: 62 DRG 64
D G
Sbjct: 264 DHG 266
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 835 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 894
Query: 61 TDRG 64
D+G
Sbjct: 895 VDKG 898
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 732 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 788
Query: 61 TDRG 64
D G
Sbjct: 789 RDNG 792
>gi|167516998|ref|XP_001742840.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779464|gb|EDQ93078.1| predicted protein [Monosiga brevicollis MX1]
Length = 7042
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+A D D GVNA + YTL S + SVSG + + LDFES SS+ V
Sbjct: 1088 VLTVTALDLDSGVNAALRYTLASDES---FLTIGSVSGILTLDSALDFESLSSFSVNVTV 1144
Query: 61 TDRGK 65
TD G
Sbjct: 1145 TDMGS 1149
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
+ASD D G+NA+++Y+L S F ++S +G + + Q LD+E R +Y+ ++ D G
Sbjct: 5495 AASDLDSGINAVLSYSLQNDFS--GLFALQSTTGLLSLEQSLDYEMRQAYDLTIIVQDSG 5552
Query: 65 K 65
Sbjct: 5553 T 5553
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV +D D G N ++ + L ++ + ++F ++ ++GEI ++ D E + YEF V+A D
Sbjct: 4152 RVPFTDADAGANGLLQFYLFDAATVGSNFLLQPLTGEIVTSRIFDREVQGRYEFRVIAQD 4211
Query: 63 RGK 65
G
Sbjct: 4212 SGT 4214
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 3 RVSASDPDCGVNAMVNY--TLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V+ASD D GVNA V + T+G S F + +VSG + ++ LDFES + + ++A
Sbjct: 5390 QVNASDADSGVNAEVRFSVTMGGS-----IFAIDAVSGVLSVSGTLDFESEETIQVQIMA 5444
Query: 61 TDRGK 65
TD+G
Sbjct: 5445 TDQGT 5449
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 3 RVSASDPDCGVNAMVNYTL--------GESPSRTNHFYMKSVSGEICIAQDLDFESRSSY 54
+V A+D D G+NA + Y++ GE+PS + F M +G + LDFE +Y
Sbjct: 1603 QVFATDADSGMNAALTYSIVSVVPSVTGETPS-SQLFAMAPTTGVVTTTAPLDFEKVKAY 1661
Query: 55 EFPVVATDRG 64
V ATD G
Sbjct: 1662 NITVQATDAG 1671
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
+ASDPD GVNA++ Y + + + F + + +G I A D E+R Y+ V A D G
Sbjct: 3738 NASDPDEGVNALIRYEM--TGADAGLFAINTSTGAITTAAVFDREAREHYQVIVTARDAG 3795
Query: 65 K 65
Sbjct: 3796 N 3796
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+D D GVN + Y++ S T F + + +G + LDFE+R +VATD
Sbjct: 3431 VTATDADSGVNGQLTYSI---LSPTYGFTVDASTGLVTGTVPLDFETRPHLTLTIVATDG 3487
Query: 64 GK 65
G
Sbjct: 3488 GS 3489
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++ A+D D G+NA V TL F++ + G + ++Q LD+E R +Y + A
Sbjct: 2398 LVQLVATDADSGINAAV--TLSVDAVSAERFHIDN-DGYLRLSQRLDYEVRRAYNVTITA 2454
Query: 61 TDRG 64
TD G
Sbjct: 2455 TDGG 2458
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A+D D GVNA + ++L ++ N + + +GE+ + + DFE++ ++ VV TD G
Sbjct: 2229 ATDADAGVNAALTWSLQDT---NNGRFSINENGELKLERAFDFEAQPYHQLTVVVTDGG 2284
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
A+D D G N V Y+L + S + +++G + + LD+E+R E VVA D+G
Sbjct: 3234 ATDADEGANGEVRYSLTQGGS---FVSIDAITGVLTLRSGLDYETRQRVEVTVVARDQGA 3290
>gi|449511796|ref|XP_002199166.2| PREDICTED: protocadherin beta-5-like, partial [Taeniopygia guttata]
Length = 485
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D GVN + Y L ++ +++ F + ++G I + + LDFE+ S+E V
Sbjct: 127 VLTVLATDQDAGVNGDITYQLSQAVGKSDSAFLIDPITGAIKLTKPLDFEAAESHEMSVR 186
Query: 60 ATDRG 64
ATD G
Sbjct: 187 ATDGG 191
>gi|354500160|ref|XP_003512170.1| PREDICTED: protocadherin-3-like isoform 3 [Cricetulus griseus]
Length = 796
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G++ V Y+L + + F + V+GEI +++ LDFE + Y + A
Sbjct: 261 VLTVSAMDLDAGIHGNVVYSLFQGGGASQPFVIDGVTGEIRLSKQLDFEVTNHYNIEIAA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDGG 324
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P+ + S+ +G++ + LD+E+ ++EF
Sbjct: 472 ISATDSDSGSNAHITYSL--LPTHDPQLALSSLISINADNGQLFALRALDYEALQTFEFR 529
Query: 58 VVATDRG 64
V ATD+G
Sbjct: 530 VGATDQG 536
>gi|344275265|ref|XP_003409433.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2-like [Loxodonta africana]
Length = 2928
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 419 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 477
Query: 61 TDRGK 65
D G+
Sbjct: 478 QDGGR 482
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + V+G + A++LD E++S++ F V
Sbjct: 204 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPVTGAVTTAEELDRETKSTHVFRVTVQ 263
Query: 62 DRG 64
D G
Sbjct: 264 DHG 266
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 943 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQAT 1000
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 835 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYTLRAYA 894
Query: 61 TDRG 64
D+G
Sbjct: 895 VDKG 898
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 732 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 788
Query: 61 TDRG 64
D G
Sbjct: 789 RDNG 792
>gi|116110520|gb|ABJ74639.1| stan [Drosophila miranda]
Length = 549
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSASDPD G+N + Y L + F + SG + + LD ES + Y +A
Sbjct: 212 VIQVSASDPDIGLNGRIKYLLSDRDVEDGSFAIDPTSGTVRTNKGLDRESVAVYHLTAIA 271
Query: 61 TDRG 64
D+G
Sbjct: 272 VDKG 275
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSA+D D G+NA + Y+L E + F + +G I LD E+ S Y
Sbjct: 102 VLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETASGYLL 161
Query: 57 PVVATDRG 64
V A D G
Sbjct: 162 TVTAKDGG 169
>gi|444713193|gb|ELW54101.1| Protocadherin gamma-B2 [Tupaia chinensis]
Length = 759
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+ RV+A+D D GVNA + Y+ HF+ + +GEI +LDFE+ +SY +
Sbjct: 261 VFRVTATDQDEGVNAEITYSFHNVDELVEHFFNLDQRTGEITTKDELDFETANSYTLNIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
>gi|397501091|ref|XP_003821231.1| PREDICTED: protocadherin-15-like, partial [Pan paniscus]
Length = 1136
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 750 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 805
>gi|395736301|ref|XP_003776733.1| PREDICTED: protocadherin gamma-C4 [Pongo abelii]
Length = 871
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|332237932|ref|XP_003268160.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Nomascus leucogenys]
Length = 2871
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 425 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 483
Query: 61 TDRGK 65
D G+
Sbjct: 484 QDGGR 488
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 949 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQAT 1006
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+N F+ + +G + A++LD E++S++ F V A
Sbjct: 210 LRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPTTGAVTTAEELDRETKSTHVFRVTAQ 269
Query: 62 DRG 64
D G
Sbjct: 270 DHG 272
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 841 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 900
Query: 61 TDRG 64
D+G
Sbjct: 901 VDKG 904
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 738 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 794
Query: 61 TDRG 64
D G
Sbjct: 795 RDNG 798
>gi|426345778|ref|XP_004040576.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Gorilla gorilla
gorilla]
Length = 2916
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y++ + S ++HF + + SGEI L ++ R SY V+ATD+
Sbjct: 865 VFAKDPDEGNNAEVTYSVSSADS-SDHFKIDANSGEIRTTTILSYDYRPSYRMTVIATDQ 923
Query: 64 G 64
G
Sbjct: 924 G 924
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G+N ++ Y++ S ++ F + ++SG I LD+E SSY V A
Sbjct: 1806 VIQVFATDLDSGLNGLIEYSI-LSGNQEEAFQIDALSGVITTKAILDYELTSSYSLIVQA 1864
Query: 61 TDRG 64
TD+G
Sbjct: 1865 TDKG 1868
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 27/39 (69%)
Query: 27 RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGK 65
+ HF ++S +G++ ++++LD+E+ S Y F V+ TD K
Sbjct: 993 KDGHFEIESSTGDLFLSKELDYETTSHYLFRVITTDHSK 1031
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+D D G +A + Y + S + HFY++ +G + + + LD+E + + V A+D
Sbjct: 2232 VSANDRDTGSHAEIIYNII-SGNEKGHFYLEENTGVLYLIKPLDYEEMTKFTLTVQASDA 2290
Query: 64 GKE 66
K+
Sbjct: 2291 EKK 2293
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L +SA D D G+N Y L + S F + +SG + + LD E+RS + F VA
Sbjct: 1497 VLVLSAVDKDEGLNGQTEYFLTDEASGA--FTIDPMSGTLKTSNTLDREARSQHTFSAVA 1554
Query: 61 TD 62
D
Sbjct: 1555 RD 1556
>gi|426216136|ref|XP_004002323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2, partial [Ovis aries]
Length = 2841
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 411 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 469
Query: 61 TDRGK 65
D G+
Sbjct: 470 QDGGR 474
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + ++G + A++LD E++S++ F V A
Sbjct: 200 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDRETKSTHVFRVTAQ 259
Query: 62 DRG 64
D G
Sbjct: 260 DHG 262
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 935 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 992
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 827 VLQISATDRDSGLNGRVFYTFQGGNDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 886
Query: 61 TDRG 64
D+G
Sbjct: 887 VDKG 890
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 724 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 780
Query: 61 TDRG 64
D G
Sbjct: 781 RDNG 784
>gi|410033344|ref|XP_003308299.2| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Pan troglodytes]
Length = 2887
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 396 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 454
Query: 61 TDRGK 65
D G+
Sbjct: 455 QDGGR 459
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 920 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 977
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+N F+ + V+G + A++LD E++S++ F V A
Sbjct: 181 LRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTTAEELDRETKSTHVFRVTAQ 240
Query: 62 DRG 64
D G
Sbjct: 241 DHG 243
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 812 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 871
Query: 61 TDRG 64
D+G
Sbjct: 872 VDKG 875
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 709 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 765
Query: 61 TDRG 64
D G
Sbjct: 766 RDNG 769
>gi|403256562|ref|XP_003945203.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-3 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVN + Y+ S + F++ SV+G I + ++DFE SYE V AT
Sbjct: 267 VNATDLDEGVNKDITYSFNTDVSADILSKFHLDSVNGHISVKGNIDFEESKSYEIQVEAT 326
Query: 62 DRG 64
D+G
Sbjct: 327 DKG 329
>gi|344275023|ref|XP_003409313.1| PREDICTED: protocadherin-15 isoform 7 [Loxodonta africana]
Length = 1918
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 771
>gi|189234730|ref|XP_973752.2| PREDICTED: similar to fat2 CG7749-PA [Tribolium castaneum]
Length = 4676
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
++ A+D D G+N + Y +S NHF M S SG + +A+ LD E R+ Y V A D
Sbjct: 3182 KIHATDADIGINRKIKYAFIDS--FNNHFKMASDSGIVTLAKPLDREIRAVYNLTVQAVD 3239
Query: 63 RG 64
+G
Sbjct: 3240 QG 3241
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V A+D D G+N ++Y++ +S + + +FY+ G + + Q LD E SS+ F VV
Sbjct: 2348 VLTVIANDNDTGINKKISYSIQNDSSNSSEYFYIDENEGVVYLKQALDHEEASSHHFIVV 2407
Query: 60 ATDRG 64
A D G
Sbjct: 2408 AKDLG 2412
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASDPD G + V Y L +S S F + +SG I + LDFE R + A+D+
Sbjct: 980 VTASDPDLGSDGEVVYFLEDSDSDGT-FKIDRLSGTIRTTKPLDFEERQVHSLIAFASDK 1038
Query: 64 G 64
G
Sbjct: 1039 G 1039
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R +A+D D G NA V Y+L + T F + +G + ++ LD E + YE + A
Sbjct: 869 IFRANATDADAGDNAKVTYSL---ITDTRDFAVDRTTGVLAVSNTLDRERQDLYELRIRA 925
Query: 61 TDRG 64
TD G
Sbjct: 926 TDGG 929
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES-PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G N+ V Y+ N F + S +G I LD E++ Y+F V
Sbjct: 2868 ILKVVAHDEDQGANSEVRYSFSHDLGDMMNIFAIDSHTGWISTLVKLDKEAKMEYKFYVT 2927
Query: 60 ATDRG 64
ATD G
Sbjct: 2928 ATDNG 2932
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N + Y+ E T+ F + +SG I +++ L + + +E V+
Sbjct: 176 ILKVVAEDADLGRNGEIYYSFAE---ETDKFAIHPMSGVISLSRPLRYNEGTYHELTVLG 232
Query: 61 TDRG 64
DRG
Sbjct: 233 QDRG 236
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+D D N V Y++ R F + SG + +A++LD E+ S+Y V+A
Sbjct: 3389 ILQVIATDLDSDRNGKVTYSIIRGDDR-EQFEIDPDSGYVSVAEELDRETTSNYVLEVLA 3447
Query: 61 TDRG 64
D G
Sbjct: 3448 RDNG 3451
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR A D D G NA + Y++ S + N F + G I +A++LD + S Y + A
Sbjct: 1623 VLRAFAVDHDKGENARITYSI-VSGNFGNVFAIDPELGIISVARELDMTANSEYMLRIKA 1681
Query: 61 TDRGK 65
D G+
Sbjct: 1682 VDHGQ 1686
>gi|444724739|gb|ELW65337.1| Cadherin EGF LAG seven-pass G-type receptor 2, partial [Tupaia
chinensis]
Length = 2958
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 386 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 444
Query: 61 TDRGK 65
D G+
Sbjct: 445 QDGGR 449
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + V+G + A++LD E++S++ F V A
Sbjct: 171 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPVTGAVTTAEELDRETKSTHVFRVTAQ 230
Query: 62 DRG 64
D G
Sbjct: 231 DHG 233
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 910 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQAT 967
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 802 VLQVSATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 861
Query: 61 TDRG 64
D+G
Sbjct: 862 VDKG 865
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 699 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 755
Query: 61 TDRG 64
D G
Sbjct: 756 RDNG 759
>gi|14277682|ref|NP_115782.1| protocadherin gamma-C4 isoform 2 precursor [Homo sapiens]
gi|5457098|gb|AAD43785.1|AF152525_1 protocadherin gamma C4 short form protein [Homo sapiens]
gi|71680343|gb|AAI01036.1| Protocadherin gamma subfamily C, 4 [Homo sapiens]
gi|72533492|gb|AAI01039.1| Protocadherin gamma subfamily C, 4 [Homo sapiens]
gi|119582350|gb|EAW61946.1| hCG1982215, isoform CRA_y [Homo sapiens]
Length = 871
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|354492215|ref|XP_003508246.1| PREDICTED: protocadherin gamma-C5-like [Cricetulus griseus]
Length = 968
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE + YE
Sbjct: 258 LLRLNATDPDEGTNGQLDYSFGDHTSEAVKNLFGLDPSSGAIHVLGPVDFEESNFYEIHA 317
Query: 59 VATDRGK 65
A D+G+
Sbjct: 318 RARDQGQ 324
>gi|344275031|ref|XP_003409317.1| PREDICTED: protocadherin-15 isoform 11 [Loxodonta africana]
Length = 1915
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 771
>gi|326663896|ref|XP_003197686.1| PREDICTED: protocadherin-7-like [Danio rerio]
Length = 1303
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A+D D G NA + Y+L PS FY+ + +G+I LD E R YEF V+A
Sbjct: 547 VVTVVAADADSGKNAEIAYSL--DPSVNGAFYIDADNGDIRATGALDRELRERYEFRVIA 604
Query: 61 TDRG 64
D+G
Sbjct: 605 RDKG 608
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A+D D GVN V Y G + + SG + + +D E S F +
Sbjct: 310 VLQVRATDRDVGVNGQVEYVFGAATESVRRLLRLDEASGWLSVLHRIDREEVSQLRFTIT 369
Query: 60 ATDRGK 65
A DRG+
Sbjct: 370 ARDRGQ 375
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 4 VSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
VSASD D G NA + Y L G +P R F + S SG I +A+ L+ R + V D
Sbjct: 771 VSASDGDTGSNADLRYALVGGNPFRL--FEIGSSSGVITLAEPLERRHRGLHRLVVRVND 828
Query: 63 RG 64
G
Sbjct: 829 SG 830
>gi|311271584|ref|XP_003133184.1| PREDICTED: protocadherin-15 isoform 9 [Sus scrofa]
Length = 1908
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 701 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 756
>gi|311271582|ref|XP_003133182.1| PREDICTED: protocadherin-15 isoform 7 [Sus scrofa]
Length = 1879
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 667 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 722
>gi|311271578|ref|XP_003133185.1| PREDICTED: protocadherin-15 isoform 10 [Sus scrofa]
Length = 1928
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 716 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 771
>gi|311271570|ref|XP_003133180.1| PREDICTED: protocadherin-15 isoform 5 [Sus scrofa]
Length = 1955
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 743 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 798
>gi|133777266|gb|AAI01037.1| PCDHGC4 protein [Homo sapiens]
Length = 870
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 260 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 319
Query: 59 VATDRG 64
A D G
Sbjct: 320 RARDGG 325
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 476 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 535
Query: 60 ATDRGK 65
A DRG
Sbjct: 536 ARDRGN 541
>gi|431899578|gb|ELK07541.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Pteropus alecto]
Length = 964
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G NA ++Y++ S + FY+ S+SG + + LDFE+ Y + A
Sbjct: 195 VLRVQATDRDQGQNAAIHYSI-VSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKA 253
Query: 61 TDRGK 65
D G+
Sbjct: 254 QDAGR 258
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D G N + YT FY++ SG I + LD E+ + Y +A
Sbjct: 629 VLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYVEPTSGVIRTQRRLDRENVAVYNLRALA 688
Query: 61 TDRG 64
DRG
Sbjct: 689 VDRG 692
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L E P F + SG + +LD+E +++Y + A D
Sbjct: 529 ISASDEDTGENARITYVL-EDP--VPQFRIDPDSGTVYTMTELDYEDQAAYTLAITARDN 585
Query: 64 G 64
G
Sbjct: 586 G 586
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
R+ A+DPD G NA + Y + E + F + +SG++ +LDFE + Y V AT
Sbjct: 738 RIRANDPDEGPNAQIMYQIVEG-NVPEVFQLDLLSGDLRALVELDFEVQREYMLLVQAT 795
>gi|395817383|ref|XP_003782151.1| PREDICTED: protocadherin gamma-C5 isoform 2 [Otolemur garnettii]
Length = 944
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE + YE
Sbjct: 261 LLRLNATDPDEGTNGHLDYSFGDHTSEAVRNLFSLDPSSGAIHVLGPVDFEESNFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
>gi|327270453|ref|XP_003220004.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
Length = 833
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G NA + Y+ P + + F++ +GEI + ++D+E+ +SYE + AT
Sbjct: 259 KVEARDLDSGSNAQITYSFHRVPEKIRDLFHVHEKTGEITVLGEIDYETETSYEMNIRAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|311271576|ref|XP_003133183.1| PREDICTED: protocadherin-15 isoform 8 [Sus scrofa]
Length = 1945
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|432920160|ref|XP_004079867.1| PREDICTED: protocadherin-7-like [Oryzias latipes]
Length = 1257
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+A+D D G NA ++Y+L S + F + S SG+I + +LD E + YEF V+A D+
Sbjct: 525 VTATDADSGKNAEISYSLDSSVNGI--FSIDSDSGDIRVNTNLDREQKERYEFKVIAKDK 582
Query: 64 GKET 67
G T
Sbjct: 583 GINT 586
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ A+D D GVN + Y G + + +G + + +D E S F V+
Sbjct: 295 ILQLKAADADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVM 354
Query: 60 ATDRGK 65
A DRG+
Sbjct: 355 ARDRGQ 360
>gi|410974957|ref|XP_003993905.1| PREDICTED: protocadherin-15 isoform 9 [Felis catus]
Length = 1538
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|395736283|ref|XP_003780468.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-16 [Pongo
abelii]
Length = 774
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L PS+ H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
VSA D D G N ++YTL E S+T + ++GEI + + +DFE+ +SYE + A
Sbjct: 264 VSARDLDSGANGKISYTLFQPSEDISKT--LEVNPMTGEIRLRKQVDFETVTSYEVDIKA 321
Query: 61 TDRG 64
TD G
Sbjct: 322 TDGG 325
>gi|344275015|ref|XP_003409309.1| PREDICTED: protocadherin-15 isoform 3 [Loxodonta africana]
Length = 1940
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|344275011|ref|XP_003409307.1| PREDICTED: protocadherin-15 isoform 1 [Loxodonta africana]
Length = 1938
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|311271572|ref|XP_003133181.1| PREDICTED: protocadherin-15 isoform 6 [Sus scrofa]
Length = 1950
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|262263276|tpg|DAA06578.1| TPA_inf: protocadherin beta 1 [Anolis carolinensis]
Length = 833
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G NA + Y+ P + + F++ +GEI + ++D+E+ +SYE + AT
Sbjct: 259 KVEARDLDSGSNAQITYSFHRVPEKIRDLFHVHEKTGEITVLGEIDYETETSYEMNIRAT 318
Query: 62 DRG 64
D G
Sbjct: 319 DGG 321
>gi|426256282|ref|XP_004021770.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Ovis aries]
Length = 4588
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y L +S S F + +G I ++LD E R SY+ V
Sbjct: 2828 VIQIRASDLDSGSNGQVMYNLDQSQSVDVIESFAINMETGWITTLRELDHEKRDSYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKVQ 2897
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ S YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGTIVLTGRLDYTETSVYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 VDRG 228
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G ++ V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSSQVRYSLLDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + + G I A++LD ++ +Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVRYSI-ESGNIGNSFTIDPILGSIKTARELDRSNQVAYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N ++Y+L S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKISYSLLNSAD--GQFSINELSGIIQLEKPLDRELQAVYTLTLKA 3201
Query: 61 TDRG 64
D G
Sbjct: 3202 VDHG 3205
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G I I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS +F + S +G I LD+E S++ F V
Sbjct: 1792 LVIRATDADKESNALLVYHIVE-PSVHKYFTIDSSTGAIHTVLSLDYEETSTFHFTVQVH 1850
Query: 62 DRG 64
D G
Sbjct: 1851 DMG 1853
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D N ++Y + G +HF++ S +G I + + LD+E ++ V
Sbjct: 2302 VVQVRATDADSEPNRGISYHMVGNHSKSHDHFHIDSGTGLISLVRTLDYEQFRQHQISVR 2361
Query: 60 ATDRG 64
A D G
Sbjct: 2362 AVDGG 2366
>gi|410974949|ref|XP_003993901.1| PREDICTED: protocadherin-15 isoform 5 [Felis catus]
Length = 1672
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|348586988|ref|XP_003479250.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Cavia porcellus]
Length = 2925
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LR++ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y V A
Sbjct: 421 ILRITASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRVRA 479
Query: 61 TDRGK 65
D G+
Sbjct: 480 QDGGR 484
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + V+G + A++LD E++S++ F V A
Sbjct: 206 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFFLDPVTGVVTTAEELDRETKSTHVFRVTAQ 265
Query: 62 DRG 64
D G
Sbjct: 266 DHG 268
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 945 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYILVIQAT 1002
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 837 VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYSLRAYA 896
Query: 61 TDRG 64
D+G
Sbjct: 897 VDKG 900
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + + +G + +LD+E + SY + A
Sbjct: 734 VVLISATDEDTGENARITYFMEDS---IPQFRIDADTGAVTTQAELDYEDQVSYTLAITA 790
Query: 61 TDRG 64
D G
Sbjct: 791 RDNG 794
>gi|344275029|ref|XP_003409316.1| PREDICTED: protocadherin-15 isoform 10 [Loxodonta africana]
Length = 1676
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|335301958|ref|XP_003359333.1| PREDICTED: protocadherin-15 [Sus scrofa]
Length = 1674
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|332234776|ref|XP_003266579.1| PREDICTED: protocadherin gamma-C4 [Nomascus leucogenys]
Length = 871
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
>gi|311271574|ref|XP_001924567.2| PREDICTED: protocadherin-15 isoform 1 [Sus scrofa]
Length = 1948
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|311271564|ref|XP_003133178.1| PREDICTED: protocadherin-15 isoform 3 [Sus scrofa]
Length = 1676
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGN----FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|116110514|gb|ABJ74636.1| stan [Drosophila miranda]
Length = 549
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSASDPD G+N + Y L + F + SG + + LD ES + Y +A
Sbjct: 212 VIQVSASDPDIGLNGRIKYLLSDRDVEDGSFAIDPTSGTVRTNKGLDRESVAVYHLTAIA 271
Query: 61 TDRG 64
D+G
Sbjct: 272 VDKG 275
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP----SRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L VSA+D D G+NA + Y+L E + F + +G I LD E+ S Y
Sbjct: 102 VLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLL 161
Query: 57 PVVATDRG 64
V A D G
Sbjct: 162 TVTAKDGG 169
>gi|11128023|ref|NP_061752.1| protocadherin gamma-C5 isoform 1 precursor [Homo sapiens]
gi|37999826|sp|Q9Y5F6.1|PCDGM_HUMAN RecName: Full=Protocadherin gamma-C5; Short=PCDH-gamma-C5; Flags:
Precursor
gi|5456984|gb|AAD43733.1| protocadherin gamma C5 [Homo sapiens]
gi|119582357|gb|EAW61953.1| hCG1982215, isoform CRA_af [Homo sapiens]
Length = 944
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESRFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
>gi|410974959|ref|XP_003993906.1| PREDICTED: protocadherin-15 isoform 10 [Felis catus]
Length = 1528
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
>gi|410974951|ref|XP_003993902.1| PREDICTED: protocadherin-15 isoform 6 [Felis catus]
Length = 1681
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 745 QVRATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 800
>gi|410974947|ref|XP_003993900.1| PREDICTED: protocadherin-15 isoform 4 [Felis catus]
Length = 1674
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVRATDPDAGINGQVHYSLGNF----NNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 983,087,614
Number of Sequences: 23463169
Number of extensions: 28375168
Number of successful extensions: 84440
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 3787
Number of HSP's that attempted gapping in prelim test: 56711
Number of HSP's gapped (non-prelim): 25556
length of query: 68
length of database: 8,064,228,071
effective HSP length: 40
effective length of query: 28
effective length of database: 7,125,701,311
effective search space: 199519636708
effective search space used: 199519636708
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)