BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8623
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSASDPDCGVNAMVNYT+GE F ++S SGEICIA +LDFE RSSYEFPV+A
Sbjct: 577 ILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 636
Query: 61 TDRG 64
TDRG
Sbjct: 637 TDRG 640
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V ASD D N +V Y + S + F + +G I I + LDFE++ +E VV
Sbjct: 252 VLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVV 311
Query: 60 ATDRGKE 66
A D G++
Sbjct: 312 AKDHGEQ 318
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA D D GVNA + Y+L F + SG I LD E ++SY F V+A
Sbjct: 1918 VVQISAVDADLGVNARLVYSLANETQW--QFAIDGQSGLITTVGKLDRELQASYNFMVLA 1975
Query: 61 TDRGK 65
TD G+
Sbjct: 1976 TDGGR 1980
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYM---KSVSGEICIAQDLDFESRSSYEFP 57
+ R ASD D G +NY++G +PS + + M S SG + A D+E R Y+
Sbjct: 2828 VFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDME 2887
Query: 58 VVATDRG 64
++A+D G
Sbjct: 2888 LLASDMG 2894
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-----------SPSRTNHFYMKSVSGEICIAQDLDFE 49
+++V+ASD D G NA + Y + + S + HF + SG I + LD E
Sbjct: 1002 IIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRE 1061
Query: 50 SRSSYEFPVVATDRG 64
+R Y+ V+ATD G
Sbjct: 1062 TRDRYQLTVLATDNG 1076
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V+ASD D G NA + Y+L S F + V+GEI + LD E R Y+ V A D+
Sbjct: 1122 VTASDLDLGENAAIRYSLLPINSS---FQVHPVTGEISTREPLDRELRELYDLVVEARDQ 1178
Query: 64 G 64
G
Sbjct: 1179 G 1179
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G NA + Y+L E+ + + F + +G + +Q L ES VV
Sbjct: 2023 LLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVV 2082
Query: 60 ATDRGKETQ 68
A D+G Q
Sbjct: 2083 ARDKGNPPQ 2091
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG 64
A D D G + V Y+L + S F + + SG + ++Q LD+ES + V ATD G
Sbjct: 902 AHDKDSGSSGQVTYSLVKE-SGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGG 959
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V ASD D G NA + Y++ + N F + S SGE+ A+ LD E S Y + A+DR
Sbjct: 1816 VVASDLDEGPNADLIYSITGG-NLGNKFSIDSSSGELS-ARPLDREQHSRYTLQIQASDR 1873
Query: 64 GK 65
G+
Sbjct: 1874 GQ 1875
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESP-SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V A D D G+N+ + Y+L E+P + F + +G I +D E+ + VV
Sbjct: 470 VLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVV 529
Query: 60 ATDRG 64
A D G
Sbjct: 530 ARDGG 534
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 31 FYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGKETQ 68
F + SG++ + + LD+E + YE V+A+D E +
Sbjct: 2425 FALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEAR 2462
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMK-SVSGEICIAQDLDFESRSSYEFPVVAT 61
+V A D D G NA + Y + + + N F ++ + SG + LD E R Y+ ++AT
Sbjct: 2290 QVHAFDSDAGSNARLRYHIVDG-NHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIAT 2348
Query: 62 DRG 64
D G
Sbjct: 2349 DEG 2351
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 13/69 (18%)
Query: 3 RVSASDPDCGVN-AMVNYTLGES------PSRTNHFYMKSVSGEICIAQDLDFESRSSYE 55
R+S DPD A VN TL +R N Y+ + + LD E S+Y
Sbjct: 365 RISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYL------VIVHLPLDREIVSNYT 418
Query: 56 FPVVATDRG 64
VVATD+G
Sbjct: 419 LSVVATDKG 427
>sp|Q9Y5H0|PCDG3_HUMAN Protocadherin gamma-A3 OS=Homo sapiens GN=PCDHGA3 PE=2 SV=2
Length = 932
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E + ++ +V
Sbjct: 156 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>sp|Q5DRB7|PCDG3_PANTR Protocadherin gamma-A3 OS=Pan troglodytes GN=PCDHGA3 PE=3 SV=1
Length = 932
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+DPD G NA V+Y L + P + F++ SVSGE+ I + LD+E YE +
Sbjct: 261 LLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVS-----GEICIAQDLDFESRSSYEFPVV 59
+A DPD G+N++ NY L SP+ + SVS E+ + + LD E R ++ +V
Sbjct: 156 TAFDPDVGINSLQNYKL--SPNDYFSLAVNSVSEGAKYPELVLERALDREKREIHQLVLV 213
Query: 60 ATDRG 64
A+D G
Sbjct: 214 ASDGG 218
>sp|Q08174|PCDH1_HUMAN Protocadherin-1 OS=Homo sapiens GN=PCDH1 PE=1 SV=2
Length = 1060
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ ++ASD D G NA + Y+L P+ F + +GEI + LD E R SYE VVA
Sbjct: 525 IAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVA 584
Query: 61 TDRG 64
DRG
Sbjct: 585 ADRG 588
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G NA + YT ++P + +G I + +D E S+ F V+
Sbjct: 299 VIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVL 358
Query: 60 ATDRG 64
A DRG
Sbjct: 359 AKDRG 363
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+V+A D D GVNA + Y++ G +P F + S SG I + ++++ + V +
Sbjct: 738 QVAAEDFDSGVNAELIYSIAGGNP--YGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVS 795
Query: 62 DRGK 65
DRGK
Sbjct: 796 DRGK 799
>sp|Q5DRD3|PCDBF_PANTR Protocadherin beta-15 OS=Pan troglodytes GN=PCDHB15 PE=3 SV=1
Length = 787
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S N F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSEEINKPFELSSLSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFH 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL +PS N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTL-LNPS-GNKFSIGTIDGEVHLTGELDREEVSNYSLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D GVNA ++YT+ S NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGVNADLHYTITGS---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQD---EGTPFQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
TDRG
Sbjct: 326 TDRG 329
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ S+Y + A
Sbjct: 1229 VLRVSASDVDEGSNGLIHYSILKG-NEERQFAIDSFSGQVTLVGKLDYEATSAYSLLIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G N V Y + + F + SV+G I +A+ LD E+ +Y V A
Sbjct: 2173 IIQVSAADNDEGTNGQVRYGIVGGNTH-QEFRIDSVTGAITVAKSLDRETTPAYTLTVQA 2231
Query: 61 TDRG 64
TDRG
Sbjct: 2232 TDRG 2235
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ VVATD
Sbjct: 711 VSATDPDMGPNGTVKYSI--SAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++Y + + R NHF + V G I + ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + A LD E ++ Y ++A
Sbjct: 602 LLVLGATDRDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D G N ++Y + ++ + F + +GEI + LD E S YE V +
Sbjct: 2689 ILTVSATDKDSGPNGQLDYEIVNG-NQESSFTINHATGEIRSIRPLDREKISHYELTVKS 2747
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2748 SDKGSPSQ 2755
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN V Y+L ++P N F + +G I + LD + SY+ +VA
Sbjct: 912 IFQAKAVDPDEGVNGRVLYSLKQNPK--NLFTINEQNGNISLLGALDVHA-GSYQVEIVA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA D D +N +++Y + S + F + S +G + +A+ LD+E S +E + ATD
Sbjct: 3113 VSARDRDTAMNGLISYNI-ISGNEEGIFAINSSTGVVTLAKALDYEMSSKHEMTISATDG 3171
Query: 64 G 64
G
Sbjct: 3172 G 3172
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSY-------- 54
+VSA+DPD G N V Y + S++ +F + + +GEI Q L +++ S +
Sbjct: 2895 QVSATDPDEGSNGQVFYFIK---SQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2951
Query: 55 EFPVVATDRGK 65
F V A+DRG
Sbjct: 2952 SFIVTASDRGN 2962
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L ++ ++ + SGE+ + Q LD E+R + V A
Sbjct: 2279 ILQVVARDDDQGPNSQLSYVL--LGGNEDNAFVLTASGELRVTQSLDREARDHFVLVVTA 2336
Query: 61 TDRG 64
D G
Sbjct: 2337 ADAG 2340
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + G I LDFE++ SY V A
Sbjct: 3215 VIHLNATDADSGANAVIAYTVQSSDS--DLFVIDPNMGVITTQGFLDFETKQSYHLTVKA 3272
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V Y L + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYALISGAD--DSFRIDPESGDLIATKRLDREHRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2795 RVTTSDEDIGINAISRYSIVDT---SLPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 2851
Query: 63 RG 64
G
Sbjct: 2852 SG 2853
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ + + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTITDG--NNGDAFGIFPDGQLYIKSELDRELQDRYVLLVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN ++Y + E F++ V+G + + LD+E++ Y V A D
Sbjct: 1863 ILATDDDSGVNGEISYVV-EEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTVRAEDG 1921
Query: 64 GKET 67
G ++
Sbjct: 1922 GGQS 1925
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N V Y + T+ F + SG++ +A L S+ Y V A
Sbjct: 1547 LTTIMAADPDEGANGEVEYEILN--GDTDTFTVDRYSGDLRVASAL-VPSQLIYNLIVSA 1603
Query: 61 TDRGKE 66
TD G E
Sbjct: 1604 TDLGPE 1609
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
VSA+ D +NA ++Y + R F M V+G++ A +D E +S Y+ +VA+
Sbjct: 815 VSATTMD--LNANISYLITTGDQR-GMFAMNPVTGQLTTASVIDREEQSFYQLKIVAS 869
>sp|Q5DRA9|PCDGE_PANTR Protocadherin gamma-B2 OS=Pan troglodytes GN=PCDHGB2 PE=3 SV=1
Length = 931
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D GVNA + Y+ + HF+ + +GEI DLDFE SSY +
Sbjct: 261 VLQVTATDRDEGVNAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT----NHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ ++SASDPD G N V+Y++ S + ++ + + SG + + D E ++E
Sbjct: 471 IAQISASDPDLGPNGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFEL 530
Query: 57 PVVATDRG 64
+ A D+G
Sbjct: 531 TLQARDQG 538
>sp|Q5DRF0|PCDA2_PANTR Protocadherin alpha-2 OS=Pan troglodytes GN=PCDHA2 PE=3 SV=1
Length = 948
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGSNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 6 ASDPDCGVNAMVNYTLGESP-----SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
ASD D GVNA+++Y L S +TN +S+S + + + LD E + +VA
Sbjct: 157 ASDADIGVNALLSYKLSSSEFFFLDIQTNDELSESLS--LVLGKSLDREETAEVNLLLVA 214
Query: 61 TDRGK 65
TD GK
Sbjct: 215 TDGGK 219
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSA D D NA+V+Y+L E + +++ + + SG++ Q LD E +F
Sbjct: 474 IFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEEVELLQF 533
Query: 57 PVVATDRG 64
V A D G
Sbjct: 534 QVTARDAG 541
>sp|Q9Y5H9|PCDA2_HUMAN Protocadherin alpha-2 OS=Homo sapiens GN=PCDHA2 PE=1 SV=1
Length = 948
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASD D G N+ + Y+LG S T F + +SGEI LD+E SYE V
Sbjct: 261 VVKLNASDADEGPNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQV 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 TATDKG 326
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMK-------SVSGEICIAQDLDFESRSSYEFPV 58
ASD D GVNA+++Y L S + F++ S S + + + LD E + +
Sbjct: 157 ASDADIGVNALLSYKL----SSSEFFFLDIQANDELSESLSLVLGKSLDREETAEVNLLL 212
Query: 59 VATDRGK 65
VATD GK
Sbjct: 213 VATDGGK 219
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSA D D NA+V+Y+L E + +++ + + SG++ Q LD E +F
Sbjct: 474 IFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEEVELLQF 533
Query: 57 PVVATDRG 64
V A D G
Sbjct: 534 QVSARDAG 541
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S S F + S SG I + Q LD E +SSY V A
Sbjct: 3149 LTRVQAVDPDVGINRKVVYSLEDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRA 3206
Query: 61 TDR 63
TD+
Sbjct: 3207 TDQ 3209
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A D D G N V Y++ + T+ F + S +G + IA LD ES+++Y + A
Sbjct: 849 IIQVEARDKDLGSNGEVTYSV---LTDTHQFVINSSTGIVYIADQLDRESKANYSLKIEA 905
Query: 61 TDRGKETQ 68
D+ + Q
Sbjct: 906 RDKAESGQ 913
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ +SY V A
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVITAADILDRETTASYWLTVYA 1119
Query: 61 TDRG 64
TDRG
Sbjct: 1120 TDRG 1123
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+
Sbjct: 957 LETQDPDLGLGGQVRYSLVND--YNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDK 1014
Query: 64 GK 65
G+
Sbjct: 1015 GR 1016
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V A D D G N V Y+L S S F + S +G I +DLD E+ ++ F
Sbjct: 2832 LAQVRAIDTDWGANGQVTYSL-HSDSHLEKVMEAFNIDSNTGWISTLKDLDHETDPTFSF 2890
Query: 57 PVVATDRGK 65
VVA+D G+
Sbjct: 2891 FVVASDLGE 2899
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ ++D D G N +V+Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 2305 VLQLVSTDADSGNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVT 2364
Query: 60 ATDRG 64
ATD G
Sbjct: 2365 ATDNG 2369
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNY---TLGESPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y +L P N F +G I ++LDFES +Y F
Sbjct: 490 VLTVSASDKDKGENGYITYSIASLNLLPFAINQF-----TGVISTTEELDFESSPETYRF 544
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 545 IVRASDWG 552
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N + Y+L S + F++ SGE+ LD E Y A
Sbjct: 3047 ILKVSAKDADIGSNGDIRYSL--YGSGNSDFFLDPESGELKTLALLDRERVPVYNLIARA 3104
Query: 61 TDRG 64
TD G
Sbjct: 3105 TDGG 3108
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + ES ++ F + S +G I +LD E + + F V
Sbjct: 1795 LVIRATDADSNQNALLVYQIVESTAK-KFFTVDSSTGAIRTIANLDHEVIAHFHFHVHVR 1853
Query: 62 DRG 64
D G
Sbjct: 1854 DSG 1856
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEI-CIAQDLDFESRSSYEFPVV 59
++++ A DPD G N + Y + S + N F + +G I ++ LD E ++ + V
Sbjct: 1166 VIQIQAEDPDSGSNEKLTYRI-TSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVT 1224
Query: 60 ATDRG 64
TD G
Sbjct: 1225 VTDGG 1229
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A DPD G+N V Y+L +S S F + S SG I + Q LD E +SSY V A
Sbjct: 3149 LTRVQAMDPDVGINRKVVYSLEDSASGV--FSIDSSSGVIVLEQPLDREQQSSYNISVRA 3206
Query: 61 TDR 63
TD+
Sbjct: 3207 TDQ 3209
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G + + Y++ + S F + SG I A LD E+ +SY V A
Sbjct: 1061 VLQVTAHDEDSGRDGEIQYSIRDG-SGLGRFNIDDESGVITAADSLDRETTASYWLTVYA 1119
Query: 61 TDRG 64
TDRG
Sbjct: 1120 TDRG 1123
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ DPD G+ V Y+L F + SG I ++++LD+E + Y V A D+
Sbjct: 957 LETQDPDLGLGGQVRYSLVND--YNGRFEVDKASGAIRLSKELDYEKQQFYNLTVRAKDK 1014
Query: 64 GK 65
G+
Sbjct: 1015 GR 1016
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE---SPSRTNHFYMKSVSGEICIAQDLDFESR-SSYEF 56
+L VSASD D G N + Y++ P N F +G I ++LDFES +Y F
Sbjct: 490 VLTVSASDKDKGENGYITYSIASLNLLPFAINQF-----TGVISTTEELDFESSPETYRF 544
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 545 IVRASDWG 552
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D G N + Y+L S N F++ SGE+ LD E Y A
Sbjct: 3047 ILKVSAKDADIGSNGDIRYSL--YGSGNNEFFLDPESGELKTLAVLDRERVPVYNLIARA 3104
Query: 61 TDRG 64
TD G
Sbjct: 3105 TDGG 3108
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L++ ++D D G N +V Y + ++ + T++F++ S SG I A+ LD E V
Sbjct: 2305 VLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVT 2364
Query: 60 ATDRG 64
ATD G
Sbjct: 2365 ATDNG 2369
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+ +V A D D G N V Y+L S S F + S +G I +DLD E+ ++ F
Sbjct: 2832 LAQVRAIDMDWGANGQVTYSL-HSDSHLEKVIEAFNIDSNTGWISTLKDLDHETDPAFSF 2890
Query: 57 PVVATDRGK 65
VVA+D G+
Sbjct: 2891 FVVASDLGE 2899
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + ES ++ F + S +G I +LD E+ + + F V
Sbjct: 1795 LVIRATDADSNQNALLVYQIVESTAK-KFFTVDSSTGAIRTIANLDHEAIAHFHFHVHVR 1853
Query: 62 DRG 64
D G
Sbjct: 1854 DSG 1856
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEI-CIAQDLDFESRSSYEFPVV 59
++++ A DPD G N + Y + S + N F + +G I ++ LD E ++ + V
Sbjct: 1166 VIQIQAEDPDSGSNEKLTYRI-TSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVT 1224
Query: 60 ATDRG 64
TD G
Sbjct: 1225 VTDGG 1229
>sp|Q9Y5G2|PCDGE_HUMAN Protocadherin gamma-B2 OS=Homo sapiens GN=PCDHGB2 PE=2 SV=1
Length = 931
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
+L+V+A+D D G+NA + Y+ + HF+ + +GEI DLDFE SSY +
Sbjct: 261 VLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIE 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AKDPG 325
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRT----NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++SASDPD G + V+Y++ S + ++ + + SG + + D E ++E +
Sbjct: 473 QISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTL 532
Query: 59 VATDRG 64
A D+G
Sbjct: 533 QARDQG 538
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 555 VLRVTATDKDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVMAPLDFEAEREYALRIRA 613
Query: 61 TDRGK 65
D G+
Sbjct: 614 QDAGR 618
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1079 QITAVDPDDGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 871 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 64 G 64
G
Sbjct: 928 G 928
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 971 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1030
Query: 61 TDRG 64
DRG
Sbjct: 1031 VDRG 1034
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPS-RTNH---FYMKSVSGEICIAQDLDFESRSSYEF 56
+L++ A+D D NA + Y SP+ RT F + SG I + +D E SYE
Sbjct: 443 ILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 PVVATDRGKE 66
V A+D+G+E
Sbjct: 503 VVEASDQGQE 512
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV A DPD G + Y+L + F + SG I A LD ES + V
Sbjct: 335 VLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 394
Query: 59 VATDRG 64
A D G
Sbjct: 395 TAQDHG 400
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 555 VLRVTATDKDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVMAPLDFEAEREYALRIRA 613
Query: 61 TDRGK 65
D G+
Sbjct: 614 QDAGR 618
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1079 QITAVDPDDGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1136
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 871 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 927
Query: 64 G 64
G
Sbjct: 928 G 928
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ YE A
Sbjct: 971 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTAYA 1030
Query: 61 TDRG 64
DRG
Sbjct: 1031 VDRG 1034
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+L++ A+D D NA + Y SP+ F + SG I + +D E SYE
Sbjct: 443 ILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 PVVATDRGKE 66
V A+D+G+E
Sbjct: 503 VVEASDQGQE 512
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV A DPD G + Y+L + F + SG I A LD ES + V
Sbjct: 335 VLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 394
Query: 59 VATDRG 64
A D G
Sbjct: 395 TAQDHG 400
>sp|Q9Y5H1|PCDG2_HUMAN Protocadherin gamma-A2 OS=Homo sapiens GN=PCDHGA2 PE=2 SV=1
Length = 932
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G A V Y L +SP T+ F +KS SGE+ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ V+A DPD NA V Y+ E + +++ + S +G + + D+E +
Sbjct: 471 VFSVTAHDPDSNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQV 530
Query: 57 PVVATDRG 64
V+A D G
Sbjct: 531 WVIARDSG 538
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+A+D D N +V+Y + SR HF + S++GEI + LDFE+ Y + A
Sbjct: 564 VLRVTATDRDKDANGLVHYNIISGNSR-GHFAIDSLTGEIQVVAPLDFEAEREYALRIRA 622
Query: 61 TDRGK 65
D G+
Sbjct: 623 QDAGR 627
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++SA+D D N V YT F ++ SG + + LD E+ S YE A
Sbjct: 980 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTAYA 1039
Query: 61 TDRG 64
DRG
Sbjct: 1040 VDRG 1043
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+++A DPD G NA + Y + E + F M SGE+ DLD+E+R Y V AT
Sbjct: 1088 QITAVDPDEGPNAHIMYQIVEG-NIPELFQMDIFSGELTALIDLDYEARQEYVIVVQAT 1145
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+SASD D G NA + Y L ++ F + + SG I + LD+E + +Y + A D
Sbjct: 880 ISASDDDVGENARITYLLEDN---LPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDN 936
Query: 64 G 64
G
Sbjct: 937 G 937
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G NA + Y+L G +P F + S +G + ++ LD ES Y F V
Sbjct: 670 VIHIQAVDADHGENARLEYSLTGVAPD--TPFVINSATGWVSVSGPLDRESVEHYFFGVE 727
Query: 60 ATDRG 64
A D G
Sbjct: 728 ARDHG 732
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH----FYMKSVSGEICIAQDLDFESRSSYEF 56
+L++ A+D D NA + Y P+ F + SG I + +D E SYE
Sbjct: 452 ILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 511
Query: 57 PVVATDRGKE 66
V A+D+G+E
Sbjct: 512 VVEASDQGQE 521
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV A DPD G + Y+L + F + SG I A LD ES + V
Sbjct: 344 VLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 403
Query: 59 VATDRG 64
A D G
Sbjct: 404 TAQDHG 409
>sp|Q9Y5E8|PCDBF_HUMAN Protocadherin beta-15 OS=Homo sapiens GN=PCDHB15 PE=1 SV=1
Length = 787
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA D D G N ++Y+L S + F + S+SGEI + + LDFE+ SSY+ +
Sbjct: 261 VVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGEIRLIKKLDFETMSSYDLDIE 320
Query: 60 ATDRG 64
A+D G
Sbjct: 321 ASDGG 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P R H + S+ +G + Q LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
>sp|Q5DRB8|PCDG2_PANTR Protocadherin gamma-A2 OS=Pan troglodytes GN=PCDHGA2 PE=3 SV=1
Length = 932
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+A+D D G A V Y L +SP T+ F +KS SGE+ I +DLD+E + +E +
Sbjct: 261 ILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIE 320
Query: 60 ATD 62
A D
Sbjct: 321 AQD 323
>sp|Q5DRB2|PCDG8_PANTR Protocadherin gamma-A8 OS=Pan troglodytes GN=PCDHGA8 PE=3 SV=1
Length = 932
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD GVN++ +Y L S +HF + +G E+ + + LD E +++ +
Sbjct: 157 AVDPDVGVNSLQSYQL----SPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHHLVL 212
Query: 59 VATDRGK 65
A+D G+
Sbjct: 213 TASDGGE 219
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ ++A DPD NA V Y++ E + +++ + S +G + Q D+E +
Sbjct: 471 IFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQL 530
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 531 LVTASDSG 538
>sp|Q9Y5G5|PCDG8_HUMAN Protocadherin gamma-A8 OS=Homo sapiens GN=PCDHGA8 PE=2 SV=1
Length = 932
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE-SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L V+ASDPD G+N V Y + + +T F + +GEI IA+ LD+E S YE +
Sbjct: 261 LLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQ 320
Query: 60 ATDRG 64
A D G
Sbjct: 321 AEDVG 325
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSSYEFPV 58
A DPD GVN++ +Y L S +HF + +G E+ + + LD E +++ +
Sbjct: 157 AVDPDVGVNSLQSYQL----SPNHHFSLDVQTGDNGAINPELVLERALDREEEAAHHLVL 212
Query: 59 VATDRGK 65
A+D GK
Sbjct: 213 TASDGGK 219
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ ++A DPD NA V Y++ E + +++ + S +G + Q D+E +
Sbjct: 471 IFSLTAHDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQL 530
Query: 57 PVVATDRG 64
V A+D G
Sbjct: 531 LVTASDSG 538
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1
Length = 4351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S SG I Q+LD E++ +Y F V
Sbjct: 2818 VIQVTANDQDTGSDGQVSYRLSVEPGSNIHQLFAVDSESGWITTLQELDCETQQTYRFYV 2877
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2878 VAFDHGQTIQ 2887
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSASD D VN+++ Y+L ++ HF + G++ +A+ LD+E SY + A
Sbjct: 3342 ILTVSASDDDGPVNSVITYSLVGG-NQLGHFTIDPKKGKLQVAKALDWEQTPSYSLRIRA 3400
Query: 61 TDRGK 65
TD G+
Sbjct: 3401 TDSGQ 3405
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E+ + V
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEMFTIQELDYEAHQHFRVKVR 2350
Query: 60 ATDRG 64
ATDRG
Sbjct: 2351 ATDRG 2355
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y A+D
Sbjct: 947 LDASDPDLGPAGEVKYILVDDVHGT--FRVDPMTGALSLEKELDFERRAGYNLSFWASDS 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD GVNA V Y+L +S F + + SG I + + L S S+ E V A+D
Sbjct: 3137 VFARDPDQGVNAQVVYSLTDSAD--GQFSIDATSGVIRLEKPLQVRSSSAVELTVRASDL 3194
Query: 64 G 64
G
Sbjct: 3195 G 3195
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y +R+ F + SG + +A L+ R YE V+A D
Sbjct: 169 KVTATDADLGQNAEFYYAFN---ARSEVFAIHPTSGVVTVAGKLNVTWRGKYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E + +F + G+I + + D+++ + Y V A
Sbjct: 2089 LFQVSATDKDLGANGTVTYGFAEDYA---YFRIDPYVGDISLKKPFDYQALNKYHLRVTA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDAG 2149
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA V+Y+ + S F + S+ G I +AQ LD + + V A
Sbjct: 1574 LLQVRAVDADRGANAEVHYSFLKGNSE-GFFNIDSLLGIITVAQRLDHVHLNRHALTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + ASD D N+++ Y + E P F + G + I +LD+E+ ++F +
Sbjct: 1785 LVIRASDSDQEANSLLVYKILE-PEALKFFKIDPSMGTLTITSELDYETTPLFQFSIYVH 1843
Query: 62 DRG 64
D+G
Sbjct: 1844 DQG 1846
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D NA + Y+L P F + +GE+ LD E + Y A
Sbjct: 3032 ILKVSAIDVDMDTNAQITYSL-HGPG-AQEFKLDPHTGELTTLSVLDRERKDVYNLVAKA 3089
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3090 TDGGGQS 3096
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A DPD + + L S + HF + +G + A+ LD E++ Y V
Sbjct: 1156 VLQLEAWDPDFSSQGKLTFNL-TSGNHMGHFIVHPFTGLLSTAKQLDRENKDEYVLEVTV 1214
Query: 61 TDRG 64
D G
Sbjct: 1215 QDNG 1218
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A DPD G + + Y L S ++ HF + S SG I + + SSY V A
Sbjct: 2398 VLKVQALDPDIGDTSRLEY-LILSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRVGA 2456
Query: 61 TD 62
+D
Sbjct: 2457 SD 2458
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N+ + YTL N F + ++ GE+ + +LD E S+Y VVA
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNP--LGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 61 TDRGK 65
TD+G+
Sbjct: 2127 TDKGQ 2131
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
VSA+DPD G N V Y++ S + F + + SG I LD E +++Y+ +VATD
Sbjct: 711 VSATDPDLGTNGTVKYSI--SAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDG 768
Query: 64 GK 65
G
Sbjct: 769 GN 770
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V+A DPD +N ++YT+ + R NHF + V G I ++D E + +E V A
Sbjct: 1439 VISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKA 1498
Query: 61 TDRG 64
D+
Sbjct: 1499 NDQA 1502
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A+D D G NA + Y L + + F M +G I + + LDFE+R Y V A
Sbjct: 269 VLQVAAADADEGTNADIRYRLQDEGTP---FQMDPETGLITVREPLDFEARRQYSLTVQA 325
Query: 61 TDRG 64
DRG
Sbjct: 326 MDRG 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRVSASD D G N +++Y++ + + F + S SG++ + LD+E+ +Y + A
Sbjct: 1229 VLRVSASDVDEGNNGLIHYSIIKG-NEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQA 1287
Query: 61 TDRG 64
D G
Sbjct: 1288 VDSG 1291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D G N V Y G TN F + SV+G I +A+ LD E +Y V
Sbjct: 2173 IIQVFAADGDEGTNGQVRY--GIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQ 2230
Query: 60 ATDRG 64
ATDRG
Sbjct: 2231 ATDRG 2235
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L + A+D D G N V ++L E+ + F + VSG + LD E ++ Y V+A
Sbjct: 602 LLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLA 661
Query: 61 TDRGKETQ 68
TD G Q
Sbjct: 662 TDLGSPPQ 669
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A DPD GVN MV Y+L ++P N F + +G I + LD + SY+ ++A
Sbjct: 912 IFQAKAVDPDEGVNGMVLYSLKQNPK--NLFAINEKNGTISLLGPLDVHA-GSYQIEILA 968
Query: 61 TDRG 64
+D G
Sbjct: 969 SDMG 972
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
V+A+D D G NA + Y++ + NH F + +G I +A+ LDFE++S Y+ + A
Sbjct: 1337 VTATDSDSGDNADLYYSITGT---NNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK 1393
Query: 62 DRGK 65
D+G+
Sbjct: 1394 DQGR 1397
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+V ASD D G N + YT+ E T + G++ I +LD E + Y VVA
Sbjct: 1015 FFKVQASDKDSGANGEIAYTIAE--GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVA 1072
Query: 61 TDRGKE 66
+DR E
Sbjct: 1073 SDRAVE 1078
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA D D G N ++Y + + N F + +GEI + LD E S Y + +
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNG-NMENSFSINHATGEIRSVRPLDREKVSHYVLTIKS 2745
Query: 61 TDRGKETQ 68
+D+G +Q
Sbjct: 2746 SDKGSPSQ 2753
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ ++A+D D G NA++ YT+ S S + F + +G I LDFE++ SY V A
Sbjct: 3213 VIHLNATDADSGTNAVIAYTVQSSDS--DLFVIDPNTGVITTQGFLDFETKQSYHLTVKA 3270
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G N+ ++Y L + N F + S SGE+ + Q LD E++ + + A
Sbjct: 2279 ILQVVARDDDRGSNSKLSYVLFGG-NEDNAFTL-SASGELGVTQSLDRETKERFVLMITA 2336
Query: 61 TDRG 64
TD G
Sbjct: 2337 TDSG 2340
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++++A D D G NA+V YT+ + F + SG++ + LD E RS Y V A
Sbjct: 1759 IMQLTAMDADEGANALVTYTIISGAD--DSFRIDPESGDLIATRRLDRERRSKYSLLVRA 1816
Query: 61 TD 62
D
Sbjct: 1817 DD 1818
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
RV+ SD D G+NA+ Y++ ++ + F + +G+I I++ L+ E Y V A D
Sbjct: 2793 RVTTSDEDIGINAISRYSIMDA---SLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Query: 63 RG 64
G
Sbjct: 2850 SG 2851
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V+ASD D NA++ G S F + +G+I + LD E++ +Y VV
Sbjct: 2383 VLLVNASDADASKNAVIRIIGGNS-----QFTINPSTGQIITSALLDRETKDNYTLVVVC 2437
Query: 61 TDRG 64
+D G
Sbjct: 2438 SDAG 2441
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D GVN + Y + E F++ ++G + + LD+E + Y V A D
Sbjct: 1863 ILATDDDSGVNGEITYIVNED-DEDGIFFLNPITGVFNLTRLLDYEVQQYYILTVRAEDG 1921
Query: 64 GKE 66
G +
Sbjct: 1922 GGQ 1924
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFES------RSSYEF 56
+VSA D D G N V Y+ F + ++SGEI D ES + + F
Sbjct: 1121 KVSAVDKDFGPNGEVRYSF---EMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSF 1177
Query: 57 PVVATDRG 64
V+ATD+G
Sbjct: 1178 TVIATDQG 1185
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ + A+DPD G N + Y + T+ F + SG++ +A L S+ Y V A
Sbjct: 1547 LTTIMAADPDEGANGEIEYEIIN--GDTDTFIVDRYSGDLRVASAL-VPSQLIYNLIVSA 1603
Query: 61 TDRGKE 66
TD G E
Sbjct: 1604 TDLGPE 1609
>sp|Q767I8|PCDA4_RAT Protocadherin alpha-4 OS=Rattus norvegicus GN=Pcdha4 PE=2 SV=1
Length = 947
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D G N V Y+ SP+ N F++ V+GEI + +DFE +SYE +
Sbjct: 261 VVKVNASDLDEGANGEVMYSFSTDISPNVKNKFHIDPVTGEIAVKGYIDFEECTSYEILI 320
Query: 59 VATDRGK 65
D+G+
Sbjct: 321 EGIDKGQ 327
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSA D D NA+V+Y+L E +++ + + SG++ Q LD E +F
Sbjct: 474 IFTVSAVDADSQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQF 533
Query: 57 PVVATDRG 64
V A D G
Sbjct: 534 QVSARDAG 541
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
Length = 4351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A+D D G + V+Y L P H F + S SG I Q+LD E++ +Y F V
Sbjct: 2818 VIQVTANDQDTGSDGQVSYRLSVEPGSNIHELFAVDSESGWITTLQELDCETQQTYRFYV 2877
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2878 VAFDHGQTIQ 2887
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSASD D VN+ + Y+L ++ HF + G++ +A+ LD+E SY + A
Sbjct: 3342 ILTVSASDDDGPVNSAITYSLVGG-NQLGHFTINPKKGKLQVAKALDWEQTPSYSLRLRA 3400
Query: 61 TDRGK 65
TD G+
Sbjct: 3401 TDSGQ 3405
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L E T F + ++G + + ++LDFE R+ Y A+D
Sbjct: 947 LDASDPDLGPAGEVKYILVEDAHGT--FQVHPMTGALSLEKELDFERRAGYNLSFWASDS 1004
Query: 64 GK 65
GK
Sbjct: 1005 GK 1006
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GEI Q+LD+E+ + V
Sbjct: 2291 VIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEIFTIQELDYETHQHFRVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A+D D G NA Y +R+ F + SG + +A L+ R YE V+A D
Sbjct: 169 KVTATDADLGQNAEFYYAFN---ARSEVFAIHPTSGVVTVAGKLNVTRRGKYELQVLAVD 225
Query: 63 RGKE 66
R ++
Sbjct: 226 RMRK 229
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E + +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDKDLGANGSVTYGFAEDYA---YFRIDPYVGDISLKKPFDYQALNKYHLRVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDSG 2149
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S F + + SG I + + L + S+ E V A+D
Sbjct: 3137 VFARDPDQGANAQVVYSLTDSAD--GQFSIDATSGVIRLEKPLQVRASSAVELTVRASDL 3194
Query: 64 G 64
G
Sbjct: 3195 G 3195
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A DPD + + L S + HF + +G + A+ LD E++ Y V
Sbjct: 1156 VLQLEAWDPDSSSQGKLTFNL-TSGNHLGHFIVHPFTGLLTTAKQLDRENKDEYVLEVTV 1214
Query: 61 TDRG 64
D G
Sbjct: 1215 QDNG 1218
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA D D NA + Y+L P F + +GE+ LD E + Y A
Sbjct: 3032 ILKVSAIDVDMDTNAQITYSL-HGPG-AQEFKLDPHTGELTTLTVLDRERKDVYNLVAKA 3089
Query: 61 TDRGKET 67
TD G ++
Sbjct: 3090 TDGGGQS 3096
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G + + Y + + + F ++ +G + +A LD+E+ S Y V
Sbjct: 734 LARLAATDPDTGFHGKLVYVISDG-NEEGCFDIELETGLLMVAAALDYETTSFYVLNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L V ASD D N+++ Y + E P F + G + +LDFE ++F +
Sbjct: 1785 LVVRASDSDREANSLLVYKILE-PEALKFFKIDPSMGTLTTTSELDFEDTPLFQFNIYVH 1843
Query: 62 DRG 64
D+G
Sbjct: 1844 DQG 1846
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D G NA ++Y+ + S F + S+ G I +AQ L + + V A
Sbjct: 1574 LLQVRAVDADRGANAEIHYSFLKGNS-DGFFNIDSLLGIITVAQRLYHVHLTRHALTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A DPD G + + Y L S ++ HF + S SG I + + SSY V A
Sbjct: 2398 VLKVQALDPDIGDTSRLEY-LILSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRVGA 2456
Query: 61 TD 62
+D
Sbjct: 2457 SD 2458
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
R+ ASDPD G+N V Y++ ES + F + V+G ++ F + + ATD
Sbjct: 1265 RLVASDPDEGLNGSVTYSIEESDEES--FRIDPVTG--VVSSSSTFAAGEYNILTIKATD 1320
Query: 63 RGK 65
G+
Sbjct: 1321 SGQ 1323
>sp|Q9Y5G3|PCDGD_HUMAN Protocadherin gamma-B1 OS=Homo sapiens GN=PCDHGB1 PE=2 SV=1
Length = 927
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 4 VSASDPDCGVNAMVN-YTLGESPSRTNHFYMKSVSG---EICIAQDLDFESRSSYEFPVV 59
+ D D G N MV YT E P F ++S S ++ IA L+ E + Y ++
Sbjct: 365 IKVRDKDSGQNGMVTCYTQEEVP-----FKLESTSKNYYKLVIAGALNREQTADYNVTII 419
Query: 60 ATDRGK 65
ATD+GK
Sbjct: 420 ATDKGK 425
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ +VSASDPD G N V+Y++ E ++ + SG + + D E ++E
Sbjct: 467 IAQVSASDPDLGPNGRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFEL 526
Query: 57 PVVATDRG 64
+ A D+G
Sbjct: 527 TLQARDQG 534
>sp|Q5DRB0|PCDGD_PANTR Protocadherin gamma-B1 OS=Pan troglodytes GN=PCDHGB1 PE=3 SV=1
Length = 927
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV A+D D G+NA + Y SP T+ F + +G+I LDFE S Y V A
Sbjct: 258 VLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEA 317
Query: 61 TDRGKET 67
D G T
Sbjct: 318 KDGGVHT 324
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGES---PSRTNHFYMKSVSGEICIAQ-DLDFESRSSYEF 56
+ +VSASDPD G N V+Y++ S P + S + AQ D E ++E
Sbjct: 467 IAQVSASDPDLGPNGRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFEL 526
Query: 57 PVVATDRG 64
+ A D+G
Sbjct: 527 TLQARDQG 534
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 4 VSASDPDCGVNAMVN-YTLGESPSRTNHFYMKSVSG---EICIAQDLDFESRSSYEFPVV 59
+ D D G N MV Y E P F ++S S ++ IA L+ E + Y ++
Sbjct: 365 IKVRDKDSGQNGMVTCYIQEEVP-----FKLESTSKNYYKLVIAGALNREQTADYNVTII 419
Query: 60 ATDRGK 65
ATD+GK
Sbjct: 420 ATDKGK 425
>sp|Q99PJ1|PCD15_MOUSE Protocadherin-15 OS=Mus musculus GN=Pcdh15 PE=1 SV=2
Length = 1943
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E+R YE VVATD
Sbjct: 743 QVRATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATD 798
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFES 50
L++ A D D G N V+Y + SP + F + +GE+ + + LD+E+
Sbjct: 843 FLQIEAKDVDLGAN--VSYRI-RSPEVKHLFALHPFTGELSLLRSLDYEA 889
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSR--TNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++++ ASD D G N V Y+L +S S F + +G I ++LD E R +Y+ V
Sbjct: 2828 VIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887
Query: 59 VATDRGKETQ 68
VA+D G++ Q
Sbjct: 2888 VASDHGEKIQ 2897
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL---GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
++ + A DPD G + V Y+L GE +F + +SG + I Q LDFE + Y
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLLDHGEG-----NFDVDKLSGAVRIVQQLDFEKKQVYNLT 1000
Query: 58 VVATDRGK 65
V A D+GK
Sbjct: 1001 VRAKDKGK 1008
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G NA V Y++ ES + N F + V G I A++LD +++ Y+ V A
Sbjct: 1581 VLQVTALDKDKGKNAEVLYSI-ESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKA 1639
Query: 61 TDRG 64
TD+G
Sbjct: 1640 TDKG 1643
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RVSA+D D G N Y+ + RT+ F + SG I + LD+ YE ++A
Sbjct: 168 IARVSATDADIGTNGEFYYSFKD---RTDMFAIHPTSGVIVLTGRLDYLETKLYEMEILA 224
Query: 61 TDRG 64
DRG
Sbjct: 225 ADRG 228
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++V A+D D G N V Y++ + T+ F + SV+G + IA+ LD E + + + A
Sbjct: 841 IIQVEATDKDLGPNGHVTYSI---VTDTDTFSIDSVTGVVNIARPLDRELQHEHSLKIEA 897
Query: 61 TDRGKE 66
D+ +E
Sbjct: 898 RDQARE 903
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ RV A+D D G+N + Y+L +S F + +SG I + + LD E ++ Y + A
Sbjct: 3144 LTRVQATDADAGLNRKILYSLIDSAD--GQFSINELSGIIQLEKPLDRELQAVYTLSLKA 3201
Query: 61 TDRG 64
D+G
Sbjct: 3202 VDQG 3205
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++SA+D D NA + YTL S + F + +GE+ + LD E ++ Y V A
Sbjct: 3042 IMQISATDADIRSNAEITYTLLGSGAEK--FKLNPDTGELKTSTPLDREEQAVYHLLVRA 3099
Query: 61 TDRG 64
TD G
Sbjct: 3100 TDGG 3103
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A+ D NA + Y++ S + F + S +G + I ++LD+ES Y V A
Sbjct: 3249 VLQVYAASRDIEANAEITYSI-ISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEA 3307
Query: 61 TDRG 64
TD G
Sbjct: 3308 TDGG 3311
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + A+D D NA++ Y + E PS +F + S +G I LD+E S + F V
Sbjct: 1792 LVIRAADADKDSNALLVYHIVE-PSVHTYFAIDSSTGAIHTVLSLDYEETSIFHFTVQVH 1850
Query: 62 DRG 64
D G
Sbjct: 1851 DMG 1853
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++V A+D D N ++Y + G +HF++ S +G I + + LD+E + V
Sbjct: 2302 VVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVR 2361
Query: 60 ATDRGKET 67
A D G T
Sbjct: 2362 AVDGGMPT 2369
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ V A D D N+ ++Y++ + ++ + F + V GE+ + + LD E+ S Y V A
Sbjct: 3354 VITVMADDADGPSNSHIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDRETISGYTLTVQA 3412
Query: 61 TDRG 64
+D G
Sbjct: 3413 SDNG 3416
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSS-YEFP 57
++ +SA DPD G N V Y++ + NH F + +G + +++LD+E Y
Sbjct: 482 VMSLSAVDPDEGENGYVTYSI----ANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLR 537
Query: 58 VVATDRG 64
+ A+D G
Sbjct: 538 IRASDWG 544
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 29 NHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+HF + +G I +A+ LD E +S+Y V ATD
Sbjct: 1400 SHFDVDKGTGTIIVAKPLDAEQKSNYNLTVEATD 1433
>sp|Q9Y5H6|PCDA8_HUMAN Protocadherin alpha-8 OS=Homo sapiens GN=PCDHA8 PE=2 SV=1
Length = 950
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G N ++Y+ +HF + +GEI I +LDFE + Y+ +
Sbjct: 261 VIKLNASDPDEGANGAISYSFNSLVETMVIDHFSIDRNTGEIVIRGNLDFEQENLYKILI 320
Query: 59 VATDRG 64
ATD+G
Sbjct: 321 DATDKG 326
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSA D D NA+V+Y+L E S +++ + + SG++ Q LD E +F
Sbjct: 474 IFTVSARDADAQENALVSYSLVERRVGERSLSSYISVHTESGKVYALQPLDHEELELLQF 533
Query: 57 PVVATDRG 64
V A D G
Sbjct: 534 QVSARDAG 541
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 13/68 (19%)
Query: 6 ASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG--------EICIAQDLDFESRSSYEFP 57
ASD D G N+++ Y L ++ ++M V+ E+ + + LD E ++
Sbjct: 157 ASDADVGANSVLTYRLS-----SHDYFMLDVNSKNDENKLVELVLRKSLDREDAPAHHLF 211
Query: 58 VVATDRGK 65
+ ATD GK
Sbjct: 212 LTATDGGK 219
>sp|Q9Y5E3|PCDB6_HUMAN Protocadherin beta-6 OS=Homo sapiens GN=PCDHB6 PE=2 SV=1
Length = 794
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G+NA V Y+L P + H + S+ +G + + LD+E+ S+EF
Sbjct: 471 VSATDRDSGINAQVTYSL--LPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFR 528
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 529 VGATDRG 535
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G V+Y L + F + +++GEI + + LDFE SY+ V A
Sbjct: 260 VITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFEEIQSYDVDVEA 319
Query: 61 TDRG 64
TD G
Sbjct: 320 TDGG 323
>sp|Q9BZA8|PC11Y_HUMAN Protocadherin-11 Y-linked OS=Homo sapiens GN=PCDH11Y PE=1 SV=1
Length = 1340
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+++VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 517 LMKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 574
Query: 61 TDRG 64
D G
Sbjct: 575 KDNG 578
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG----EICIAQDLDFESRSSYEFPVVA 60
+A DPD G+N + NY L +S + +++ G ++ + ++LD E + +Y V
Sbjct: 194 AAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKV 253
Query: 61 TDRG 64
D G
Sbjct: 254 EDGG 257
>sp|D3ZE55|PCDH8_RAT Protocadherin-8 OS=Rattus norvegicus GN=Pcdh8 PE=1 SV=2
Length = 1069
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEIC----IAQDLDFESRSSYEFPVVATDR 63
D D G N + + L E S G C + Q+LD ES++SY +VA D
Sbjct: 161 DEDVGANGLQSVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQASYSLELVAQDG 220
Query: 64 GK 65
G+
Sbjct: 221 GR 222
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 4 VSASDPDCGVNAMVNYTLGES------PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
V+A DPD G N V Y L E+ + + + + +G I + D+E+ +
Sbjct: 519 VAARDPDLGRNGQVTYRLVEAEVGRSGEAVSTYVSVDPATGAIYALRSFDYETLRQLDVR 578
Query: 58 VVATDRG 64
V A+D G
Sbjct: 579 VQASDGG 585
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2
Length = 4349
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+A D D G + V+Y L P H F + S SG I Q+LD E+ +Y F V
Sbjct: 2816 VIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELDCETCQTYHFHV 2875
Query: 59 VATDRGKETQ 68
VA D G+ Q
Sbjct: 2876 VAYDHGQTIQ 2885
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L VSA+D D +N+ + Y+L ++ HF + GE+ +A+ LD E SSY + A
Sbjct: 3340 ILTVSATDEDGPLNSDITYSLIGG-NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRA 3398
Query: 61 TDRGK 65
TD G+
Sbjct: 3399 TDSGQ 3403
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASDPD G V Y L + T F + ++G + + ++LDFE R+ Y + A+D
Sbjct: 947 LDASDPDLGPAGEVRYVLMDGAHGT--FRVDLMTGALILERELDFERRAGYNLSLWASDG 1004
Query: 64 GK 65
G+
Sbjct: 1005 GR 1006
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVV 59
++++ ASD D G N V+Y + E S + F+ + +GE+ Q+LD+E++ + V
Sbjct: 2291 VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVR 2350
Query: 60 ATDRG 64
A D+G
Sbjct: 2351 AMDKG 2355
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V A D D GVNA V+Y+L + S F + ++ G I +AQ LD + + + V A
Sbjct: 1574 LLQVRAMDADRGVNAEVHYSLLKGNSE-GFFNINALLGIITLAQKLDQANHAPHTLTVKA 1632
Query: 61 TDRG 64
D+G
Sbjct: 1633 EDQG 1636
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G N V Y E +F + G+I + + D+++ + Y V+A
Sbjct: 2089 LFQVSATDEDLGTNGAVTYEFAED---YTYFRIDPYLGDISLKKPFDYQALNKYHLKVIA 2145
Query: 61 TDRG 64
D G
Sbjct: 2146 RDGG 2149
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
V A DPD G NA V Y+L +S HF + + +G I + + L ++ E V A+D
Sbjct: 3135 VFARDPDQGANAQVVYSLPDSAE--GHFSIDATTGVIRLEKPLQVRPQAPLELTVRASDL 3192
Query: 64 G 64
G
Sbjct: 3193 G 3193
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ ASD D N+++ Y + E P F + G + I ++D+ES S++F V D+
Sbjct: 1787 IHASDSDKEANSLLVYKILE-PEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQ 1845
Query: 64 G 64
G
Sbjct: 1846 G 1846
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ R++A+DPD G N + Y + + + F ++ +G + +A LD+E+ + Y V
Sbjct: 734 LARLAATDPDAGFNGKLVYVIADG-NEEGCFDIELETGLLTVAAPLDYEATNFYILNVTV 792
Query: 61 TDRG 64
D G
Sbjct: 793 YDLG 796
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+VSA+D D NA + Y+L P + F + +GE+ LD E + + A
Sbjct: 3030 ILKVSATDLDTDTNAQITYSL-HGPG-AHEFKLDPHTGELTTLTALDRERKDVFNLVAKA 3087
Query: 61 TDRG 64
TD G
Sbjct: 3088 TDGG 3091
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A DPD + + + S + F + V+G + AQ LD E++ + V
Sbjct: 1156 VLQLDAWDPDSSSKGKLTFNI-TSGNYMGFFMIHPVTGLLSTAQQLDRENKDEHILEVTV 1214
Query: 61 TDRGK 65
D G+
Sbjct: 1215 LDNGE 1219
>sp|Q7TSK3|PCDH8_MOUSE Protocadherin-8 OS=Mus musculus GN=Pcdh8 PE=2 SV=1
Length = 1070
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLG-ESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L + A+DPD G N V +T G +P H F + SG + +A +D+E + +YE V
Sbjct: 265 LLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLDPRSGRLTLAGQVDYERQDTYELDV 324
Query: 59 VATDRG 64
A DRG
Sbjct: 325 RAQDRG 330
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 8 DPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEIC----IAQDLDFESRSSYEFPVVATDR 63
D D G N + + L E S G C + Q+LD ES++SY +VA D
Sbjct: 161 DEDVGANGLQSVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQASYSLELVAQDG 220
Query: 64 GK 65
G+
Sbjct: 221 GR 222
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 4 VSASDPDCGVNAMVNYTLGES------PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFP 57
V+A DPD G N V Y L E+ + + + + +G I + D+E+ +
Sbjct: 519 VAARDPDVGRNGQVTYRLVEAEVGRSGEAVSTYVSVDPATGAIYALRSFDYETLRQLDVR 578
Query: 58 VVATDRG 64
V A+D G
Sbjct: 579 VQASDGG 585
>sp|Q5DRD6|PCDBD_PANTR Protocadherin beta-13 OS=Pan troglodytes GN=PCDHB13 PE=3 SV=1
Length = 798
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFEFR 530
Query: 58 VVATDRG 64
V A+D G
Sbjct: 531 VGASDHG 537
>sp|Q9Y5F0|PCDBD_HUMAN Protocadherin beta-13 OS=Homo sapiens GN=PCDHB13 PE=2 SV=1
Length = 798
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D GVN ++Y+L ++ F + ++GEI + + LDFE SYE +
Sbjct: 262 VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIE 321
Query: 60 ATDRG 64
A D G
Sbjct: 322 ARDAG 326
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA V Y+L P + H + S+ +G + + LD+E+ ++F
Sbjct: 473 VSATDRDSGTNAQVTYSL--LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFR 530
Query: 58 VVATDRG 64
V A+D G
Sbjct: 531 VGASDHG 537
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2 LRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
L + D D GVN MV Y + + ++ N F + S +G I + + LD+E+ + Y F V +
Sbjct: 1842 LTLQVKDADVGVNGMVEYHIVDDLAK-NFFKIDSTTGAIELLRQLDYETNAGYTFDVTVS 1900
Query: 62 DRGK 65
D GK
Sbjct: 1901 DMGK 1904
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L+V+A D D G+N + Y+L + +F + +GEI + Q L + S +E VVA
Sbjct: 199 ILKVTADDADLGINGEIYYSL---LMDSEYFAIHPTTGEITLLQQLQYAENSHFELTVVA 255
Query: 61 TDRG 64
DRG
Sbjct: 256 YDRG 259
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+++VSA+D D G N + Y L ++ + N F + SG I + LD E +S Y F V+
Sbjct: 2895 LVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 2954
Query: 60 ATDRG 64
A D G
Sbjct: 2955 AADNG 2959
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++R+ SDPD G NA+V Y + + F + SG + A+ LD E +SSY V A
Sbjct: 416 VIRLKVSDPDLGKNALV-YLEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSA 474
Query: 61 TDRG 64
D+
Sbjct: 475 IDQA 478
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L V A+D D VN +V Y + E F + +G I +++ LD E+ S Y + A
Sbjct: 3413 ILDVKATDEDSDVNGLVTYNI-ERGDNIGQFSIDPKNGTISVSRPLDRETISHYTLEIQA 3471
Query: 61 TDRG 64
D+G
Sbjct: 3472 CDQG 3475
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+L+++A+D D G NA ++Y + + N FY+ G + + LD+E + V
Sbjct: 2357 ILKINATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLKTPLDYEQIKYHHIVV 2416
Query: 59 VATDRG 64
D G
Sbjct: 2417 NVKDHG 2422
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++++ A+D D + + PS F + S+SG + + Q LDFE + + V
Sbjct: 1522 IMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 1581
Query: 61 TDRG 64
D+G
Sbjct: 1582 KDQG 1585
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 1 MLRVSASDPDCGVNAMVNYT---LGESPSRTNHFYMKSVSGEICIAQDLDFES-RSSYEF 56
+++++A D D G N+ ++Y+ L P +HF SG + LDFE+ + +YE
Sbjct: 523 VVKLTAKDRDSGENSYISYSIANLNAVPFEIDHF-----SGIVKTTSLLDFETMKRNYEL 577
Query: 57 PVVATDRG 64
+ A+D G
Sbjct: 578 IIRASDWG 585
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A+D D G+NA V Y L S F + + +G + + + LD E + +Y + A D
Sbjct: 896 LHATDADSGINAQVTYALSVECS---DFTVNATTGCLRLNKPLDREKQDNYALHITAKDG 952
Query: 64 G 64
G
Sbjct: 953 G 953
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRTNHFYMK--SVSGEICIAQDLDFESRSSYEFP 57
+ +V A D D GVN + Y+L GE NH Y K +G I + + LD E+ S +
Sbjct: 3204 ITKVHAMDKDFGVNRQIKYSLMGE-----NHDYFKISKSTGIIRLHKSLDRETISLFNLT 3258
Query: 58 VVATDRG 64
V A D G
Sbjct: 3259 VKAEDCG 3265
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDR 63
+ A D D G NA + ++L E F + +G I LD+E++ + V A D
Sbjct: 999 IEAVDEDIGPNAEIQFSLKEETQDEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDG 1058
Query: 64 G 64
G
Sbjct: 1059 G 1059
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 1 MLRVSASDPDCGV----NAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L++ S P V + + NYT S + +M S SGE+ + Q LD E + S+
Sbjct: 2785 LLKIIESTPPGTVLTKLHMIGNYTFKFSIAADQDHFMISDSGELILQQTLDREQQESHNL 2844
Query: 57 PVVA 60
VVA
Sbjct: 2845 IVVA 2848
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 29 NHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
N FY+ +G I +++ LD+E++ SY + TD
Sbjct: 1447 NTFYIGQDNGNILLSKYLDYETQQSYNLTISVTD 1480
>sp|Q5DRD8|PCDBB_PANTR Protocadherin beta-11 OS=Pan troglodytes GN=PCDHB11 PE=3 SV=1
Length = 797
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA VNY+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 473 VSATDRDSGTNAQVNYSL--LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVV 59
+L VSA D D G N + YTL + F + SG+I + LDFE+ SY +
Sbjct: 261 ILTVSAWDLDSGTNGEICYTLSHASEDIRKTFEINQKSGDITLTAPLDFETIESYSIIIQ 320
Query: 60 ATDRG 64
ATDRG
Sbjct: 321 ATDRG 325
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-------EICIAQDLDFESRSS 53
L SA D D G+NA+ +YT+ S +HF++K E+ + + LD+E
Sbjct: 152 FLLESAKDLDVGINAVKSYTI----SPNSHFHIKMRVNPDNRKYPELVLDKALDYEELPE 207
Query: 54 YEFPVVATDRG 64
F + A D G
Sbjct: 208 LSFILTALDGG 218
>sp|Q96QU1|PCD15_HUMAN Protocadherin-15 OS=Homo sapiens GN=PCDH15 PE=1 SV=2
Length = 1955
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V A+DPD G+N V+Y+LG N+ + + +G I A L+ E R YE VVATD
Sbjct: 738 QVKATDPDAGINGQVHYSLG----NFNNLFRITSNGSIYTAVKLNREVRDYYELVVVATD 793
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LRV A+D D G +++ Y L P + F +++ +G I A RS ++F V
Sbjct: 1163 VLRVKATDKDTGNYSVMAYRLIIPPIKEGKEGFVVETYTGLIKTAMLFHNMRRSYFKFQV 1222
Query: 59 VATD 62
+ATD
Sbjct: 1223 IATD 1226
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFES 50
+L++ A D D G N V+Y + SP + F + +GE+ + + LD+E+
Sbjct: 838 ILQIEAKDVDLGAN--VSYRI-RSPEVKHFFALHPFTGELSLLRSLDYEA 884
>sp|Q9Y5E9|PCDBE_HUMAN Protocadherin beta-14 OS=Homo sapiens GN=PCDHB14 PE=2 SV=1
Length = 798
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G NA VNY+L P + H + S+ +G + + LD+E+ +EF
Sbjct: 473 VSATDRDSGTNAQVNYSL--LPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFR 530
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 531 VGATDRG 537
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMK-------SVSGEICIAQDLDFESRSS 53
L SA D D G N++ NYT+ S +HFY+K + E+ + + LD+E +
Sbjct: 152 FLMESAQDLDVGSNSLQNYTI----SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAE 207
Query: 54 YEFPVVATDRG 64
+ A D G
Sbjct: 208 LRLTLTAVDGG 218
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH-FYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+SA D D G ++YT + F + +SGE+ + LDFE SY + ATD
Sbjct: 264 ISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQSYTINIQATD 323
Query: 63 RG 64
G
Sbjct: 324 GG 325
>sp|Q5DRA3|PCDGL_PANTR Protocadherin gamma-C4 OS=Pan troglodytes GN=PCDHGC4 PE=3 SV=1
Length = 938
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSV---SGEICIAQDLDFESRSSYEFPV 58
+S DPD G N V+ + +H F +KS + A LD E++SSY+ V
Sbjct: 372 ISVQDPDSGSNGDVSLRI------PDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMV 425
Query: 59 VATDRGK 65
A+D G
Sbjct: 426 TASDAGN 432
>sp|Q9Y5F7|PCDGL_HUMAN Protocadherin gamma-C4 OS=Homo sapiens GN=PCDHGC4 PE=2 SV=1
Length = 938
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTL-GESPSRT-NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++++ASDPD G + V + G +P R N F + +G++ + LDFES + YEF V
Sbjct: 261 LIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDV 320
Query: 59 VATDRG 64
A D G
Sbjct: 321 RARDGG 326
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSR----TNHFYMKSVSGEICIAQDLDFESRSSYEFPVV 59
++ASDPD G+NA+++Y+L E +R ++ + +G + + D+E + +F V
Sbjct: 477 LAASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQ 536
Query: 60 ATDRGK 65
A DRG
Sbjct: 537 ARDRGN 542
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNH--FYMKSV---SGEICIAQDLDFESRSSYEFPV 58
+S DPD G N V+ + +H F +KS + A LD E++SSY+ V
Sbjct: 372 ISVQDPDSGSNGDVSLRI------PDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMV 425
Query: 59 VATDRGK 65
A+D G
Sbjct: 426 TASDAGN 432
>sp|Q9Y5F6|PCDGM_HUMAN Protocadherin gamma-C5 OS=Homo sapiens GN=PCDHGC5 PE=2 SV=1
Length = 944
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESRFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
SA DPD G N + YTL SP+ +K++ E+ + Q LD E+++ ++ +
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPNSHFSLNVKTLKDGKPFPELVLEQQLDREAQARHQLVLT 213
Query: 60 ATDRG 64
A D G
Sbjct: 214 AVDGG 218
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A D D G NA ++Y+L + F + + +GE+ A+ L + + + V+ D
Sbjct: 591 KVTAVDADAGHNAWLSYSLLPQSTAPGLFLVSTHTGEVRTARALLEDDSDTQQVVVLVRD 650
Query: 63 RG 64
G
Sbjct: 651 NG 652
>sp|Q5DRA2|PCDGM_PANTR Protocadherin gamma-C5 OS=Pan troglodytes GN=PCDHGC5 PE=3 SV=1
Length = 944
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRT--NHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+LR++A+DPD G N ++Y+ G+ S N F + SG I + +DFE YE
Sbjct: 261 LLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESRFYEIHA 320
Query: 59 VATDRGK 65
A D+G+
Sbjct: 321 RARDQGQ 327
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG-----EICIAQDLDFESRSSYEFPVV 59
SA DPD G N + YTL SP+ +K++ E+ + Q LD E+++ ++ +
Sbjct: 156 SAQDPDVGTNTVSFYTL--SPNSHFSLNVKTLKDGKPFPELVLEQQLDREAQARHQLVLT 213
Query: 60 ATDRG 64
A D G
Sbjct: 214 AVDGG 218
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATD 62
+V+A D D G NA ++Y+L + F + + +GE+ A+ L + + + V+ D
Sbjct: 591 KVTAVDADAGHNAWLSYSLLPQSTAPGLFLVSTHTGEVRTARALLEDDSDTQQVVVLVRD 650
Query: 63 RG 64
G
Sbjct: 651 NG 652
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+LRV+ASD D G NA+V+Y++ +R FY+ + +G + + LD+E+ Y + A
Sbjct: 418 VLRVTASDRDKGSNALVHYSIMSGNAR-GQFYLDAQTGALDVVSPLDYETTKEYTLRIRA 476
Query: 61 TDRGK 65
D G+
Sbjct: 477 QDGGR 481
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 4 VSASDPDCGVNAMVNYTLGES-PSRTNHFY-MKSVSGEICIAQDLDFESRSSYEFPVVAT 61
+ A DPD G + YT+ SR+NHF+ + ++G + A++LD E++S++ F V A
Sbjct: 203 LRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGVVTTAEELDRETKSTHVFRVTAQ 262
Query: 62 DRG 64
D G
Sbjct: 263 DHG 265
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 RVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVAT 61
RV+A+DPD G NA + Y + E + F + SGE+ DLD+E R Y + AT
Sbjct: 943 RVTATDPDEGTNAQIMYQIVEG-NIPEVFQLDIFSGELTALVDLDYEDRPEYVLVIQAT 1000
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ +SA+D D G NA + Y + +S F + +G + +LD+E + SY + A
Sbjct: 732 VVLISATDEDTGENARITYFMEDS---IPQFRIDGDTGAVTTQAELDYEDQVSYTLAITA 788
Query: 61 TDRG 64
D G
Sbjct: 789 RDNG 792
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+L++ A+D D G+N V YT F ++S SG + + LD E+ + Y A
Sbjct: 835 VLQILATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYA 894
Query: 61 TDRG 64
D+G
Sbjct: 895 VDKG 898
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNH---FYMKSVSGEICIAQDLDFESRSSYEFP 57
+L V A D D G NA + Y+L + H F + + +G I +A +LD E Y F
Sbjct: 525 VLHVQAIDADAGDNARLEYSL----AGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 580
Query: 58 VVATDRG 64
V A D G
Sbjct: 581 VEARDHG 587
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 1 MLRVSASDPDCGVNAMVNYTL----GESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+L V A+D D NA + Y L G+SPS + F + SG I +D E SY+
Sbjct: 308 VLTVRATDGDAPPNANILYRLLEGAGDSPS--DAFEIDPRSGVIRTRGPVDREEVESYKL 365
Query: 57 PVVATDRGKE 66
V A+D+G++
Sbjct: 366 TVEASDQGRD 375
>sp|Q63418|PCDH3_RAT Protocadherin-3 OS=Rattus norvegicus GN=Pcdh3 PE=2 SV=1
Length = 797
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA+D D GV V Y+L + F + ++GEI ++++LDFE S++ + A
Sbjct: 261 VVTVSATDLDAGVYGNVTYSLFQGYGVFQPFVIDEITGEIHLSKELDFEEISNHNIEIAA 320
Query: 61 TDRG 64
TD G
Sbjct: 321 TDGG 324
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
+SA+D D G NA + Y+L P + S+ +G++ + LD+E+ S+EF
Sbjct: 472 ISATDSDSGSNAHITYSL--LPPDDPQLALDSLISINVDNGQLFALRALDYEALQSFEFY 529
Query: 58 VVATDRG 64
V ATD G
Sbjct: 530 VGATDGG 536
>sp|O88689|PCDA4_MOUSE Protocadherin alpha-4 OS=Mus musculus GN=Pcdha4 PE=1 SV=1
Length = 947
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
+++V+ASD D GVN + Y+ SP+ F++ VSGEI + +DFE SYE +
Sbjct: 261 VVKVNASDLDEGVNGDIMYSFSTDISPNVKYKFHIDPVSGEIIVKGYIDFEECKSYEILI 320
Query: 59 VATDRGK 65
D+G+
Sbjct: 321 EGIDKGQ 327
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE----SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEF 56
+ VSA D D NA+V+Y+L E +++ + + SG++ Q LD E F
Sbjct: 474 IFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLRF 533
Query: 57 PVVATDRG 64
V A D G
Sbjct: 534 QVSARDAG 541
>sp|Q5DRC8|PCDB6_PANTR Protocadherin beta-6 OS=Pan troglodytes GN=PCDHB6 PE=3 SV=1
Length = 794
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 4 VSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV------SGEICIAQDLDFESRSSYEFP 57
VSA+D D G+NA V Y+L P + H + S+ +G + + LD+E+ ++EF
Sbjct: 471 VSATDRDSGINAQVTYSL--LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFR 528
Query: 58 VVATDRG 64
V ATDRG
Sbjct: 529 VGATDRG 535
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
++ VSA D D G V+Y L + F + +++GEI + + LDFE SY+ V A
Sbjct: 260 VITVSARDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFEEIQSYDLDVEA 319
Query: 61 TDRG 64
TD G
Sbjct: 320 TDGG 323
>sp|O55134|PCD12_MOUSE Protocadherin-12 OS=Mus musculus GN=Pcdh12 PE=2 SV=1
Length = 1180
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGE--SPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPV 58
++ ++A+DPD G N V + G+ SP N F + + +G+I + Q LD+E +YE V
Sbjct: 263 LINLTATDPDQGPNGEVEFFFGKHVSPEVMNTFGIDAKTGQIILRQALDYEKNPAYEVDV 322
Query: 59 VATDRGKET 67
A D G +
Sbjct: 323 QARDLGPNS 331
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSV-SGEICIAQDLDFESRSSYEFPVV 59
++ + A D D G N V+Y + +SP +H + +GE+ + LD+E + +EF V+
Sbjct: 479 LITLKAHDADLGSNGKVSYRIKDSP--VSHLVIIDFETGEVTAQRSLDYEQMAGFEFQVI 536
Query: 60 ATDRGK 65
A DRG+
Sbjct: 537 AEDRGQ 542
>sp|Q6WXV7|PC11X_PONPY Protocadherin-11 X-linked OS=Pongo pygmaeus GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MLRVSASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVA 60
+ +VSA+D D G NA +NY LG P F + +G + + + LD E Y F ++A
Sbjct: 485 LTKVSATDADSGPNAEINYLLG--PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILA 542
Query: 61 TDRG 64
D G
Sbjct: 543 KDNG 546
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 5 SASDPDCGVNAMVNYTLGESPSRTNHFYMKSVSG----EICIAQDLDFESRSSYEFPVVA 60
+A DPD G+N + NY L +S + +++ G ++ + ++LD E + +Y V
Sbjct: 162 AAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKV 221
Query: 61 TDRG 64
D G
Sbjct: 222 EDGG 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,516,270
Number of Sequences: 539616
Number of extensions: 680417
Number of successful extensions: 2519
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 1416
Number of HSP's gapped (non-prelim): 872
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)