Query psy8628
Match_columns 75
No_of_seqs 132 out of 686
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 23:38:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8628.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8628hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dn1_A NSEC1, syntaxin binding 99.9 1.2E-23 4E-28 162.5 6.8 72 3-74 515-586 (594)
2 3puk_A Syntaxin-binding protei 99.9 9.8E-23 3.4E-27 157.3 7.8 71 3-74 511-581 (592)
3 3c98_A Syntaxin-binding protei 99.8 1.9E-21 6.4E-26 149.1 6.6 71 4-74 528-598 (606)
4 1epu_A S-SEC1; parallel beta-s 99.8 1.2E-20 4.2E-25 144.0 8.0 72 4-75 518-590 (591)
5 2xhe_A UNC18; exocytosis, exoc 99.8 8E-20 2.7E-24 141.6 6.5 54 20-74 563-616 (650)
6 1mqs_A SLY1 protein, SLY1P; SM 99.7 6.2E-17 2.1E-21 126.0 7.6 56 19-74 605-662 (671)
7 1tqx_A D-ribulose-5-phosphate 72.3 3.3 0.00011 28.2 3.2 37 24-65 173-209 (227)
8 1y0e_A Putative N-acetylmannos 71.2 5.8 0.0002 25.7 4.2 44 24-72 175-219 (223)
9 1h1y_A D-ribulose-5-phosphate 70.3 1.9 6.4E-05 28.7 1.6 37 24-65 173-209 (228)
10 3ctl_A D-allulose-6-phosphate 62.0 5.7 0.0002 26.9 2.8 42 24-70 167-213 (231)
11 2zbt_A Pyridoxal biosynthesis 61.8 12 0.0004 25.6 4.4 41 25-70 210-254 (297)
12 3cu2_A Ribulose-5-phosphate 3- 60.8 6.7 0.00023 26.8 3.0 44 24-70 187-232 (237)
13 1yxy_A Putative N-acetylmannos 56.9 12 0.00042 24.4 3.7 43 24-71 186-229 (234)
14 2nv1_A Pyridoxal biosynthesis 55.1 17 0.00057 25.1 4.3 43 24-71 209-255 (305)
15 2fli_A Ribulose-phosphate 3-ep 54.4 5.7 0.00019 25.6 1.6 37 24-65 170-206 (220)
16 3ovp_A Ribulose-phosphate 3-ep 54.4 4.8 0.00017 27.2 1.3 42 24-70 169-213 (228)
17 3h3e_A Uncharacterized protein 53.7 19 0.00064 24.9 4.3 36 28-63 175-212 (267)
18 2v82_A 2-dehydro-3-deoxy-6-pho 53.6 15 0.00052 23.6 3.6 35 24-63 148-182 (212)
19 2x5n_A SPRPN10, 26S proteasome 50.8 37 0.0013 21.9 5.2 34 21-55 105-140 (192)
20 1rpx_A Protein (ribulose-phosp 50.3 7.1 0.00024 25.5 1.6 38 24-66 179-216 (230)
21 1tqj_A Ribulose-phosphate 3-ep 49.3 5.9 0.0002 26.5 1.1 43 24-71 173-218 (230)
22 3inp_A D-ribulose-phosphate 3- 46.4 5.7 0.0002 27.4 0.7 45 22-71 193-240 (246)
23 1yxm_A Pecra, peroxisomal tran 45.0 64 0.0022 21.2 5.9 31 26-58 20-50 (303)
24 3f4w_A Putative hexulose 6 pho 44.0 6 0.00021 25.4 0.5 42 24-70 159-203 (211)
25 4adt_A Pyridoxine biosynthetic 43.3 20 0.0007 25.3 3.2 43 24-71 209-255 (297)
26 2yxb_A Coenzyme B12-dependent 42.2 62 0.0021 20.3 5.5 50 21-73 17-68 (161)
27 1yad_A Regulatory protein TENI 39.7 15 0.0005 23.9 1.9 35 24-63 164-198 (221)
28 2ki0_A DS119; beta-alpha-beta, 38.4 19 0.00066 17.9 1.8 24 32-56 11-34 (36)
29 1wa3_A 2-keto-3-deoxy-6-phosph 38.1 14 0.00049 23.5 1.6 34 24-62 150-183 (205)
30 4gmf_A Yersiniabactin biosynth 38.1 42 0.0014 24.0 4.3 38 33-71 103-142 (372)
31 3o26_A Salutaridine reductase; 37.7 76 0.0026 20.6 5.2 43 26-70 14-56 (311)
32 1to0_A Hypothetical UPF0247 pr 36.4 15 0.0005 24.2 1.4 10 24-33 101-110 (167)
33 3mng_A Peroxiredoxin-5, mitoch 35.8 16 0.00056 23.1 1.6 50 21-70 42-100 (173)
34 3ajx_A 3-hexulose-6-phosphate 35.2 18 0.00062 23.0 1.7 35 25-64 159-193 (207)
35 3q3v_A Phosphoglycerate kinase 34.2 52 0.0018 24.6 4.3 35 21-57 191-226 (403)
36 4fmw_A RNA (guanine-9-)-methyl 34.0 14 0.00048 24.7 1.1 44 27-70 122-175 (197)
37 1ns5_A Hypothetical protein YB 34.0 15 0.00051 23.8 1.2 8 26-33 98-105 (155)
38 1o6d_A Hypothetical UPF0247 pr 33.4 18 0.0006 23.8 1.4 9 25-33 96-104 (163)
39 1zzg_A Glucose-6-phosphate iso 32.7 68 0.0023 23.7 4.7 44 27-73 69-113 (415)
40 3q58_A N-acetylmannosamine-6-p 32.6 59 0.002 21.7 4.1 43 24-71 181-224 (229)
41 3igs_A N-acetylmannosamine-6-p 32.4 61 0.0021 21.6 4.1 43 24-71 181-224 (232)
42 4fak_A Ribosomal RNA large sub 32.4 16 0.00056 23.9 1.2 12 21-32 102-113 (163)
43 3lyu_A Putative hydrogenase; t 32.1 58 0.002 19.7 3.7 20 24-43 19-38 (142)
44 1xi3_A Thiamine phosphate pyro 32.0 13 0.00044 23.6 0.6 33 25-62 163-195 (215)
45 3rkr_A Short chain oxidoreduct 32.0 92 0.0031 20.1 4.9 32 26-59 31-62 (262)
46 3i1j_A Oxidoreductase, short c 32.0 95 0.0033 19.6 4.9 32 26-59 16-47 (247)
47 1tp9_A Peroxiredoxin, PRX D (t 31.9 19 0.00064 21.9 1.3 38 21-58 34-79 (162)
48 3t7c_A Carveol dehydrogenase; 31.7 1.1E+02 0.0036 20.4 5.2 30 26-57 30-59 (299)
49 3lyl_A 3-oxoacyl-(acyl-carrier 30.5 1E+02 0.0036 19.5 4.9 32 26-59 7-38 (247)
50 3qiv_A Short-chain dehydrogena 30.3 1.1E+02 0.0037 19.5 5.4 31 26-58 11-41 (253)
51 1vpe_A Phosphoglycerate kinase 30.3 63 0.0022 24.1 4.2 35 21-57 183-218 (398)
52 3i4e_A Isocitrate lyase; struc 30.1 1.3E+02 0.0044 22.7 5.9 50 26-75 286-346 (439)
53 3ezl_A Acetoacetyl-COA reducta 29.5 1.1E+02 0.0038 19.4 6.1 46 23-70 12-58 (256)
54 1php_A 3-phosphoglycerate kina 29.3 66 0.0023 24.0 4.1 35 21-57 184-219 (394)
55 4fey_A Phosphoglycerate kinase 29.3 53 0.0018 24.5 3.6 35 21-57 183-218 (395)
56 3svt_A Short-chain type dehydr 29.3 1.2E+02 0.0041 19.8 5.7 43 26-70 13-55 (281)
57 3pk0_A Short-chain dehydrogena 28.7 1.2E+02 0.0041 19.7 5.0 43 26-70 12-54 (262)
58 3o63_A Probable thiamine-phosp 28.6 15 0.00053 25.0 0.6 42 24-70 191-235 (243)
59 3sju_A Keto reductase; short-c 28.3 1.3E+02 0.0044 19.8 5.8 43 26-70 26-68 (279)
60 3awd_A GOX2181, putative polyo 28.0 1.2E+02 0.004 19.2 5.4 31 26-58 15-45 (260)
61 3jr2_A Hexulose-6-phosphate sy 28.0 13 0.00046 24.3 0.1 39 24-67 166-204 (218)
62 3rih_A Short chain dehydrogena 27.7 1.4E+02 0.0048 20.0 6.0 44 26-71 43-86 (293)
63 3hxi_C Eukaryotic translation 27.6 25 0.00084 15.9 1.0 18 56-73 2-19 (21)
64 1lqv_C Vitamin-K dependent pro 27.5 25 0.00085 17.5 1.1 10 33-42 22-31 (33)
65 3l77_A Short-chain alcohol deh 27.4 1.2E+02 0.004 19.0 5.5 32 26-59 4-35 (235)
66 2fsv_C NAD(P) transhydrogenase 27.4 13 0.00045 25.5 0.0 33 32-64 103-137 (203)
67 3tu3_B EXOU; type III secretio 27.4 25 0.00084 28.3 1.6 34 29-64 284-317 (711)
68 1ccw_A Protein (glutamate muta 27.2 1.1E+02 0.0037 18.5 4.5 46 21-66 54-101 (137)
69 2tps_A Protein (thiamin phosph 26.7 16 0.00055 23.5 0.4 33 25-62 173-205 (227)
70 4gj1_A 1-(5-phosphoribosyl)-5- 26.5 1E+02 0.0036 20.5 4.5 40 26-69 77-117 (243)
71 1v6s_A Phosphoglycerate kinase 26.4 60 0.0021 24.2 3.4 36 20-57 180-216 (390)
72 3raz_A Thioredoxin-related pro 26.2 99 0.0034 17.8 5.0 48 21-68 23-73 (151)
73 2cun_A Phosphoglycerate kinase 25.9 1.2E+02 0.004 22.8 5.0 38 20-57 186-224 (410)
74 2agk_A 1-(5-phosphoribosyl)-5- 25.8 48 0.0016 22.5 2.7 36 29-70 81-121 (260)
75 3u7q_A Nitrogenase molybdenum- 25.7 48 0.0016 24.7 2.9 20 23-42 247-266 (492)
76 2nwq_A Probable short-chain de 25.7 70 0.0024 21.2 3.5 48 8-58 6-53 (272)
77 1u5t_B Defective in vacuolar p 25.7 32 0.0011 22.4 1.7 33 33-74 40-73 (169)
78 4dxd_A Cell division protein F 25.6 1.3E+02 0.0044 22.4 5.1 38 21-58 262-303 (396)
79 2x9g_A PTR1, pteridine reducta 25.4 1.5E+02 0.005 19.4 5.3 47 9-59 10-56 (288)
80 16pk_A PGK, 3-phosphoglycerate 25.1 58 0.002 24.5 3.2 36 20-57 201-237 (415)
81 2q8n_A Glucose-6-phosphate iso 25.1 1.3E+02 0.0046 22.4 5.2 45 27-73 81-137 (460)
82 3oz7_A Phosphoglycerate kinase 24.9 49 0.0017 24.9 2.7 35 21-57 204-239 (417)
83 4ibo_A Gluconate dehydrogenase 24.8 1.2E+02 0.0043 19.8 4.6 43 26-70 28-70 (271)
84 3f1l_A Uncharacterized oxidore 24.7 1.4E+02 0.0049 19.1 5.2 32 26-59 14-45 (252)
85 3qja_A IGPS, indole-3-glycerol 24.5 1.2E+02 0.0039 20.9 4.5 44 24-72 213-260 (272)
86 3f9i_A 3-oxoacyl-[acyl-carrier 24.3 1.4E+02 0.0048 18.9 4.8 31 26-58 16-46 (249)
87 3a1f_A Cytochrome B-245 heavy 24.1 1.2E+02 0.0042 18.1 4.4 18 24-41 18-35 (186)
88 2pju_A Propionate catabolism o 24.0 66 0.0022 21.6 3.1 26 34-60 139-164 (225)
89 1to3_A Putative aldolase YIHT; 23.9 56 0.0019 22.8 2.8 40 26-67 224-271 (304)
90 3r1i_A Short-chain type dehydr 23.9 1.6E+02 0.0055 19.4 6.4 43 26-70 34-76 (276)
91 3ucx_A Short chain dehydrogena 23.8 1.5E+02 0.0052 19.1 5.0 32 26-59 13-44 (264)
92 1f8m_A Isocitrate lyase, ICL; 23.4 1.9E+02 0.0064 21.7 5.7 49 26-74 282-341 (429)
93 1fmc_A 7 alpha-hydroxysteroid 23.1 1.5E+02 0.005 18.6 4.6 31 26-58 13-43 (255)
94 1j34_C Coagulation factor IX; 23.0 33 0.0011 18.3 1.1 12 33-44 23-34 (46)
95 3ioy_A Short-chain dehydrogena 23.0 1.6E+02 0.0054 19.9 4.9 32 26-59 10-41 (319)
96 2c07_A 3-oxoacyl-(acyl-carrier 22.8 1.7E+02 0.0057 19.1 5.3 30 26-57 46-75 (285)
97 1lbj_A Motilin; A-helix, B-tur 22.7 72 0.0024 14.9 2.2 15 33-47 5-19 (26)
98 1qpg_A PGK, 3-phosphoglycerate 22.7 58 0.002 24.5 2.8 37 20-58 199-236 (415)
99 2wzb_A Phosphoglycerate kinase 22.6 62 0.0021 24.3 2.9 36 21-58 202-238 (416)
100 3n74_A 3-ketoacyl-(acyl-carrie 22.5 1.6E+02 0.0054 18.8 5.4 32 26-59 11-42 (261)
101 3h7a_A Short chain dehydrogena 22.3 1.6E+02 0.0056 18.9 6.4 43 26-70 9-51 (252)
102 3gaf_A 7-alpha-hydroxysteroid 22.0 1.7E+02 0.0057 18.9 5.0 32 26-59 14-45 (256)
103 2wu8_A Glucose-6-phosphate iso 22.0 1.6E+02 0.0053 22.7 5.1 45 27-73 146-193 (549)
104 3nyw_A Putative oxidoreductase 21.9 1.7E+02 0.0057 18.8 5.2 41 26-68 9-49 (250)
105 1pno_A NAD(P) transhydrogenase 21.7 14 0.00049 24.9 -0.7 34 32-65 80-115 (180)
106 3otr_A Enolase; structural gen 21.5 1.2E+02 0.0041 22.9 4.3 37 34-71 361-397 (452)
107 3cuq_B Vacuolar protein-sortin 21.5 72 0.0025 21.4 2.9 18 57-74 110-127 (218)
108 4fc7_A Peroxisomal 2,4-dienoyl 21.5 1.8E+02 0.0061 19.0 5.3 33 26-60 29-61 (277)
109 3qtp_A Enolase 1; glycolysis, 21.5 1.2E+02 0.0041 22.8 4.3 37 34-71 358-394 (441)
110 3v8b_A Putative dehydrogenase, 21.3 1.8E+02 0.0063 19.1 5.8 43 26-70 30-72 (283)
111 2pd6_A Estradiol 17-beta-dehyd 21.3 1.5E+02 0.0053 18.7 4.4 31 26-58 9-39 (264)
112 3tsm_A IGPS, indole-3-glycerol 21.3 45 0.0015 23.2 1.8 39 23-66 219-258 (272)
113 1fw8_A PGK P72, phosphoglycera 21.2 63 0.0021 24.3 2.7 35 21-57 130-165 (416)
114 1yb1_A 17-beta-hydroxysteroid 21.0 1.8E+02 0.0061 18.8 5.4 31 26-58 33-63 (272)
115 3lrx_A Putative hydrogenase; a 21.0 77 0.0026 19.5 2.8 20 24-43 24-43 (158)
116 3drn_A Peroxiredoxin, bacterio 20.9 85 0.0029 18.6 2.9 47 21-69 27-80 (161)
117 3tfo_A Putative 3-oxoacyl-(acy 20.9 1.9E+02 0.0064 19.0 4.9 32 26-59 6-37 (264)
118 3lf2_A Short chain oxidoreduct 20.8 1.8E+02 0.0061 18.8 5.2 31 26-58 10-40 (265)
119 2gek_A Phosphatidylinositol ma 20.7 1.7E+02 0.0057 19.4 4.6 35 25-59 209-249 (406)
120 3t4x_A Oxidoreductase, short c 20.7 1.6E+02 0.0056 19.0 4.5 32 26-59 12-43 (267)
121 2pzm_A Putative nucleotide sug 20.5 1.9E+02 0.0066 19.1 5.0 31 24-56 20-50 (330)
122 1zmr_A Phosphoglycerate kinase 20.3 58 0.002 24.2 2.3 35 21-57 180-215 (387)
123 4gfi_A Mandelate racemase/muco 20.2 41 0.0014 23.3 1.4 25 30-57 252-276 (329)
124 3szu_A ISPH, 4-hydroxy-3-methy 20.0 2.1E+02 0.0072 20.7 5.2 38 26-63 228-265 (328)
125 3tg0_A Apase, alkaline phospha 20.0 2.4E+02 0.0082 21.2 5.7 26 21-46 41-66 (449)
No 1
>1dn1_A NSEC1, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} PDB: 3puj_A 3c98_A
Probab=99.89 E-value=1.2e-23 Score=162.47 Aligned_cols=72 Identities=56% Similarity=1.086 Sum_probs=52.6
Q ss_pred cccccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcCC
Q psy8628 3 HIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS 74 (75)
Q Consensus 3 ~s~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l~ 74 (75)
.|+|+|+|++.+++.+.++++++||||+||+||+|+|++|++++.+++++|+||||+|+||++|+++|..|+
T Consensus 515 ~s~r~~~w~~~~~~~~~~~~~riivFivGG~Ty~E~r~~~els~~~~~~~VilG~t~il~p~~Fl~~l~~l~ 586 (594)
T 1dn1_A 515 VSARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLN 586 (594)
T ss_dssp -----------------CCCCEEEEEEETCEEHHHHHHHHHHHHHHSSCEEEEEESSEECHHHHHHHHTTTT
T ss_pred cccccccccccCCccccccCCcEEEEEeCCccHHHHHHHHHHHhhcCCceEEEeeCCcCCHHHHHHHHHHhC
Confidence 367889999988666677889999999999999999999999998877999999999999999999999886
No 2
>3puk_A Syntaxin-binding protein 3; membrane trafficking, SM protein, snare proteins, binding protein, endocytosis-exocytosis complex; 3.05A {Mus musculus} PDB: 2pjx_A
Probab=99.87 E-value=9.8e-23 Score=157.29 Aligned_cols=71 Identities=45% Similarity=0.764 Sum_probs=59.0
Q ss_pred cccccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcCC
Q psy8628 3 HIARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS 74 (75)
Q Consensus 3 ~s~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l~ 74 (75)
.|+|+|+| +++++.+..+++++||||+||+||+|+|++|++++..++++|+||||+|+||++|+++|..|+
T Consensus 511 ~s~r~~~w-~~~~~~~~~~~~riiVFivGGvTysE~r~~~els~~~~~~~vilG~T~i~np~~fl~~l~~l~ 581 (592)
T 3puk_A 511 VSARQKPR-TNYLELDRKNGSRLIIFVIGGITYSEMRCAYEVSQAHKSCEVIIGSTHILTPRKLLDDIKMLN 581 (592)
T ss_dssp -------C-CCCCCCCCSCCSEEEEEEETCEEHHHHHHHHHHHHHCCSSEEEEEESSEECHHHHHHHHSSTT
T ss_pred cccccccc-ccCccccccCCCeEEEEEeCCcCHHHHHHHHHHHhhcCCceEEEeeCCcCCHHHHHHHHHHhC
Confidence 36777999 766656677889999999999999999999999998877999999999999999999999886
No 3
>3c98_A Syntaxin-binding protein 1; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus} PDB: 3puj_A
Probab=99.84 E-value=1.9e-21 Score=149.09 Aligned_cols=71 Identities=56% Similarity=1.110 Sum_probs=52.5
Q ss_pred ccccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcCC
Q psy8628 4 IARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS 74 (75)
Q Consensus 4 s~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l~ 74 (75)
++++|+|++.+.++...+++++|||||||+||+|++++++++++.++++|+||||+|+||++|+++|.+|+
T Consensus 528 ~~~~~~~~~~~~~~~~~~~~~iIVFvvGGvTy~E~~~l~~ls~~~~~~~viiGsT~Iln~~~fl~~L~~L~ 598 (606)
T 3c98_A 528 SARYGHWHKNKAPGEYRSGPRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLN 598 (606)
T ss_dssp ----------------CCCSEEEEEEETCEEHHHHHHHHHHHHHHSSCEEEEEESSEECHHHHHHHHTTTT
T ss_pred ccccCCccccCCCCCCCCCCEEEEEEECCcCHHHHHHHHHHHHHcCCcEEEEEeCCeeCHHHHHHHHHHhC
Confidence 45668999988888888899999999999999999999999988767899999999999999999999986
No 4
>1epu_A S-SEC1; parallel beta-sheets, LEFT-hand turn connection, helical BUN endocytosis-exocytosis complex; 2.40A {Loligo pealei} SCOP: e.25.1.1 PDB: 1fvf_A 1fvh_A
Probab=99.82 E-value=1.2e-20 Score=144.04 Aligned_cols=72 Identities=57% Similarity=1.087 Sum_probs=51.0
Q ss_pred ccccCCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhh-cCCceEEEecccccChHHHHHHHhcCCC
Q psy8628 4 IARYGHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNN-VKNWEVIIGSSHIMTPEDFLNNLSNLSV 75 (75)
Q Consensus 4 s~~~~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~-~~~~~iiiGst~il~~~~fl~~l~~l~~ 75 (75)
|+++|+|++.+++.....++++|||||||+||+|++++++++++ ..+++|+||||+|+||++|+++|..|+.
T Consensus 518 s~~~~~~~~~~~~~~~~~~~~viVF~vGG~Ty~E~~~l~~l~~~~~~~~~viigsT~i~n~~~fl~~l~~l~~ 590 (591)
T 1epu_A 518 SVRYGHWHKDKGQASYKSGPRLIIFVVGGISYSEMRSAYEVTQTAKNNWEVILGSTHILTPEGLLRDLRKISN 590 (591)
T ss_dssp ----------------CCCCEEEEEEETCBCHHHHHHHHHHHTSSCSSCEEEEEESSBCCHHHHHHHHHTTSC
T ss_pred ccccCcccCCCCccccCCCCeEEEEEECCCCHHHHHHHHHHHhhccCCCeEEEecCCcCCHHHHHHHHHHhcC
Confidence 45668999877655556678899999999999999999999983 4578999999999999999999998863
No 5
>2xhe_A UNC18; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis}
Probab=99.79 E-value=8e-20 Score=141.61 Aligned_cols=54 Identities=48% Similarity=0.845 Sum_probs=50.1
Q ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcCC
Q psy8628 20 KNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNLS 74 (75)
Q Consensus 20 ~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l~ 74 (75)
.+++++|||||||+||+|++++|+++++. +++|+||||+|+||++|++++..|+
T Consensus 563 ~~~~~viVF~iGGvTysEi~al~~ls~~~-~~~viigsT~Iln~~~fl~~l~~l~ 616 (650)
T 2xhe_A 563 SAKPKLFVFINGTVSYNEIRCAYEVSQSS-GYEVYIGAHNIATPAEFVELVSLLD 616 (650)
T ss_dssp CCSCEEEEEEEEEECHHHHHHHHHHHTTS-SSEEEEEEEEECCHHHHHHHHHTTT
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHhcC-CCEEEEeeCCcCCHHHHHHHHHHcC
Confidence 55788999999999999999999999764 7999999999999999999999886
No 6
>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1
Probab=99.68 E-value=6.2e-17 Score=125.95 Aligned_cols=56 Identities=30% Similarity=0.525 Sum_probs=50.2
Q ss_pred cCCCCeEEEEEECCCCHHHHHHHHHHHhhc--CCceEEEecccccChHHHHHHHhcCC
Q psy8628 19 VKNVPRLIVFIIGGVSFSEIRCAYEVTNNV--KNWEVIIGSSHIMTPEDFLNNLSNLS 74 (75)
Q Consensus 19 ~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~--~~~~iiiGst~il~~~~fl~~l~~l~ 74 (75)
+.+++++|||||||+||+|++++++++++. ++++|+||||+|+||++|+++|..|+
T Consensus 605 ~~~~~~viVFvVGG~Ty~E~~~l~~l~~~~~~~~~~viiGsT~I~n~~~Fl~~l~~l~ 662 (671)
T 1mqs_A 605 RQSYNKSLVFVVGGGNYLEYQNLQEWAHSQLHNPKKVMYGSTAITTPAEFLNEISRLG 662 (671)
T ss_dssp CCCCSEEEEEEETCBCHHHHHHHHHHHTTCCSSCCEEEEEESSBCCHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEECCccHHHHHHHHHHHhhccCCCceEEEeeccccCHHHHHHHHHHhC
Confidence 345699999999999999999999999873 47899999999999999999998763
No 7
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=72.32 E-value=3.3 Score=28.21 Aligned_cols=37 Identities=19% Similarity=0.381 Sum_probs=28.4
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPED 65 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~ 65 (75)
.+-|.|.||++-+.+..+.+ . +.++++.|+.|.+..+
T Consensus 173 ~~~I~VdGGI~~~ti~~~~~---a--GAd~~V~GsaIf~~~d 209 (227)
T 1tqx_A 173 NLNIQVDGGLNIETTEISAS---H--GANIIVAGTSIFNAED 209 (227)
T ss_dssp TCEEEEESSCCHHHHHHHHH---H--TCCEEEESHHHHTCSS
T ss_pred CCeEEEECCCCHHHHHHHHH---c--CCCEEEEeHHHhCCCC
Confidence 67789999999887766643 2 5788999999986533
No 8
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=71.24 E-value=5.8 Score=25.68 Aligned_cols=44 Identities=11% Similarity=0.165 Sum_probs=33.0
Q ss_pred eEEEEEECCC-CHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhc
Q psy8628 24 RLIVFIIGGV-SFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSN 72 (75)
Q Consensus 24 ~iiVFvvGGi-Ty~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~ 72 (75)
.+-|+..||+ |.+.+..+.+. +.+.++-|+.+.+|....+.+.+
T Consensus 175 ~ipvia~GGI~~~~~~~~~~~~-----Gad~v~vG~al~~p~~~~~~~~~ 219 (223)
T 1y0e_A 175 DAKVIAEGNVITPDMYKRVMDL-----GVHCSVVGGAITRPKEITKRFVQ 219 (223)
T ss_dssp CSEEEEESSCCSHHHHHHHHHT-----TCSEEEECHHHHCHHHHHHHHHH
T ss_pred CCCEEEecCCCCHHHHHHHHHc-----CCCEEEEChHHcCcHHHHHHHHH
Confidence 4678899999 88888877542 45666666779999888877754
No 9
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=70.30 E-value=1.9 Score=28.70 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=26.8
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPED 65 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~ 65 (75)
.+-|++.||++-+.+..+. +. +.++++.|+.|.+..+
T Consensus 173 ~~pi~v~GGI~~~ni~~~~---~a--GaD~vvvGsai~~~~d 209 (228)
T 1h1y_A 173 SLDIEVDGGLGPSTIDVAA---SA--GANCIVAGSSIFGAAE 209 (228)
T ss_dssp TSEEEEESSCSTTTHHHHH---HH--TCCEEEESHHHHTSSC
T ss_pred CCCEEEECCcCHHHHHHHH---Hc--CCCEEEECHHHHCCCC
Confidence 4568999999987565543 22 5788888898886543
No 10
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=62.00 E-value=5.7 Score=26.95 Aligned_cols=42 Identities=10% Similarity=0.085 Sum_probs=30.3
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEec-ccccCh----HHHHHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGS-SHIMTP----EDFLNNL 70 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGs-t~il~~----~~fl~~l 70 (75)
.+.|-+-||++-+.+..+.+. +.++++.| +.|.+. .+-+++|
T Consensus 167 ~~~I~VdGGI~~~~~~~~~~a-----GAd~~V~G~saif~~~d~~~~~~~~l 213 (231)
T 3ctl_A 167 EYEIEVDGSCNQATYEKLMAA-----GADVFIVGTSGLFNHAENIDEAWRIM 213 (231)
T ss_dssp CCEEEEESCCSTTTHHHHHHH-----TCCEEEECTTTTGGGCSSHHHHHHHH
T ss_pred CceEEEECCcCHHHHHHHHHc-----CCCEEEEccHHHhCCCCcHHHHHHHH
Confidence 577999999998877776432 56888888 888864 3444444
No 11
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=61.79 E-value=12 Score=25.62 Aligned_cols=41 Identities=15% Similarity=0.307 Sum_probs=27.8
Q ss_pred EEEEEECCC-CHHHHHHHHHHHhhcCCceEEEeccccc---ChHHHHHHH
Q psy8628 25 LIVFIIGGV-SFSEIRCAYEVTNNVKNWEVIIGSSHIM---TPEDFLNNL 70 (75)
Q Consensus 25 iiVFvvGGi-Ty~E~~~i~~l~~~~~~~~iiiGst~il---~~~~fl~~l 70 (75)
+++++.||+ |.+.+..+.+. +.+.++-|+.++ +|...++++
T Consensus 210 vi~~a~GGI~~~e~i~~~~~a-----GadgvvvGsai~~~~dp~~~~~~l 254 (297)
T 2zbt_A 210 VVNFAAGGIATPADAALMMHL-----GMDGVFVGSGIFKSGDPRKRARAI 254 (297)
T ss_dssp SCEEBCSSCCSHHHHHHHHHT-----TCSEEEECGGGGGSSCHHHHHHHH
T ss_pred cEEEeeCCCCCHHHHHHHHHc-----CCCEEEEchHHhCCCCHHHHHHHH
Confidence 556799999 88887776542 456666666676 566665555
No 12
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=60.82 E-value=6.7 Score=26.82 Aligned_cols=44 Identities=9% Similarity=0.155 Sum_probs=30.3
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccC--hHHHHHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMT--PEDFLNNL 70 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~--~~~fl~~l 70 (75)
.+.|.+.||++-+.+..+. +-.-+.++++.|+.|.+ |.+-++.|
T Consensus 187 ~~~I~vdGGI~~~~~~~~~---~~~aGad~~VvGSaIf~~d~~~~~~~l 232 (237)
T 3cu2_A 187 EKLINIDGSMTLELAKYFK---QGTHQIDWLVSGSALFSGELKTNLKVW 232 (237)
T ss_dssp GCEEEEESSCCHHHHHHHH---HSSSCCCCEEECGGGGSSCHHHHHHHH
T ss_pred CceEEEECCcCHHHHHHHH---HhCCCCcEEEEeeHHhCCCHHHHHHHH
Confidence 5779999999988877763 20015688888888885 44444444
No 13
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=56.92 E-value=12 Score=24.36 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=31.4
Q ss_pred eEEEEEECCCC-HHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHh
Q psy8628 24 RLIVFIIGGVS-FSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLS 71 (75)
Q Consensus 24 ~iiVFvvGGiT-y~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~ 71 (75)
.+-|...||++ .+.+..+.+ . +.+.++-|+.+..|....+++.
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~----~-Gad~v~vGsal~~p~~~~~~l~ 229 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKIND----L-GVAGIVVGGAITRPKEIAERFI 229 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHT----T-CCSEEEECHHHHCHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHH----C-CCCEEEEchHHhChHHHHHHHH
Confidence 46688999998 887777643 2 4566666668888888777765
No 14
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=55.14 E-value=17 Score=25.12 Aligned_cols=43 Identities=19% Similarity=0.354 Sum_probs=27.8
Q ss_pred eEEEEEECCC-CHHHHHHHHHHHhhcCCceEEEeccccc---ChHHHHHHHh
Q psy8628 24 RLIVFIIGGV-SFSEIRCAYEVTNNVKNWEVIIGSSHIM---TPEDFLNNLS 71 (75)
Q Consensus 24 ~iiVFvvGGi-Ty~E~~~i~~l~~~~~~~~iiiGst~il---~~~~fl~~l~ 71 (75)
.+++|..||+ |.+.+..+.+ . +.+-++-|+.++ +|..+++++.
T Consensus 209 Pvi~~a~GGI~~~~d~~~~~~----~-GadgV~vGsai~~~~~p~~~~~~l~ 255 (305)
T 2nv1_A 209 PVVNFAAGGVATPADAALMMQ----L-GADGVFVGSGIFKSDNPAKFAKAIV 255 (305)
T ss_dssp SSCEEBCSCCCSHHHHHHHHH----T-TCSCEEECGGGGGSSCHHHHHHHHH
T ss_pred CEEEEeccCCCCHHHHHHHHH----c-CCCEEEEcHHHHcCCCHHHHHHHHH
Confidence 3577899999 8888776653 2 344455555665 6666666554
No 15
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=54.40 E-value=5.7 Score=25.62 Aligned_cols=37 Identities=27% Similarity=0.429 Sum_probs=23.3
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPED 65 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~ 65 (75)
.+-|++.||++-+.+..+.+. +.+.++-|+.|..+.+
T Consensus 170 ~~~i~v~GGI~~~~~~~~~~~-----Gad~vvvGsai~~~~d 206 (220)
T 2fli_A 170 SFDIEVDGGVDNKTIRACYEA-----GANVFVAGSYLFKASD 206 (220)
T ss_dssp CCEEEEESSCCTTTHHHHHHH-----TCCEEEESHHHHTSSC
T ss_pred CceEEEECcCCHHHHHHHHHc-----CCCEEEEChHHhCCCC
Confidence 456889999997656555432 3455666666765433
No 16
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=54.38 E-value=4.8 Score=27.18 Aligned_cols=42 Identities=29% Similarity=0.378 Sum_probs=29.1
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccC---hHHHHHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMT---PEDFLNNL 70 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~---~~~fl~~l 70 (75)
.+.|.|.||++-+.+..+.+ . +.++++.|+.|.+ |..-++++
T Consensus 169 ~~~I~VdGGI~~~t~~~~~~---a--GAd~~VvGsaIf~a~dp~~~~~~l 213 (228)
T 3ovp_A 169 SLDIEVDGGVGPDTVHKCAE---A--GANMIVSGSAIMRSEDPRSVINLL 213 (228)
T ss_dssp TCEEEEESSCSTTTHHHHHH---H--TCCEEEESHHHHTCSCHHHHHHHH
T ss_pred CCCEEEeCCcCHHHHHHHHH---c--CCCEEEEeHHHhCCCCHHHHHHHH
Confidence 46789999999776666543 2 5688888888885 44444444
No 17
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=53.73 E-value=19 Score=24.90 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=28.4
Q ss_pred EEECCCCHHHHHHHHHHHhhc--CCceEEEecccccCh
Q psy8628 28 FIIGGVSFSEIRCAYEVTNNV--KNWEVIIGSSHIMTP 63 (75)
Q Consensus 28 FvvGGiTy~E~~~i~~l~~~~--~~~~iiiGst~il~~ 63 (75)
.|+=||+.+=+-.+.+-+++. ....-+|||.++.++
T Consensus 175 vvitGCsH~GI~Niv~~a~~~~g~~i~~viGGfHL~~~ 212 (267)
T 3h3e_A 175 VVITGCSHRGIDNILLDIAETFNERIKMVVGGFHLLKS 212 (267)
T ss_dssp EEEESCCTTCHHHHHHHHHTTCSSCEEEEEEECCCTTS
T ss_pred EEEeCCCCcCHHHHHHHHHHHhCCCceEEEeccccCCC
Confidence 467789998888887777664 246779999999987
No 18
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=53.63 E-value=15 Score=23.55 Aligned_cols=35 Identities=17% Similarity=0.194 Sum_probs=24.3
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccCh
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTP 63 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~ 63 (75)
.+-|+..||++-+.+..+.+ . +.+.+..|+.+...
T Consensus 148 ~ipvia~GGI~~~~i~~~~~----~-Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 148 DIAVFAVGGVTPENLAQWID----A-GCAGAGLGSDLYRA 182 (212)
T ss_dssp TCEEEEESSCCTTTHHHHHH----H-TCSEEEECTTTCCT
T ss_pred CCeEEEeCCCCHHHHHHHHH----c-CCCEEEEChHHhCC
Confidence 47889999999666666543 2 45666666777765
No 19
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=50.76 E-value=37 Score=21.92 Aligned_cols=34 Identities=12% Similarity=0.101 Sum_probs=20.6
Q ss_pred CCCeEEEEEECCCC--HHHHHHHHHHHhhcCCceEEE
Q psy8628 21 NVPRLIVFIIGGVS--FSEIRCAYEVTNNVKNWEVII 55 (75)
Q Consensus 21 ~~~~iiVFvvGGiT--y~E~~~i~~l~~~~~~~~iii 55 (75)
..+++|||+.|+.+ -.|...+.+..++. +.+|++
T Consensus 105 ~~~riiil~~~~~~~~~~~~~~~a~~lk~~-gi~v~~ 140 (192)
T 2x5n_A 105 QRQRIVAFVGSPIVEDEKNLIRLAKRMKKN-NVAIDI 140 (192)
T ss_dssp SEEEEEEEECSCCSSCHHHHHHHHHHHHHT-TEEEEE
T ss_pred CCceEEEEEECCCCCCchhHHHHHHHHHHC-CCEEEE
Confidence 34578999999885 34444444444443 566664
No 20
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=50.34 E-value=7.1 Score=25.54 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=24.1
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDF 66 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~f 66 (75)
.+-|++.||++-+.+..+.+ . +.+.++-|+.|.++.+.
T Consensus 179 ~~pi~v~GGI~~~n~~~~~~---a--Gad~vvvgSaI~~a~dp 216 (230)
T 1rpx_A 179 NPWIEVDGGVGPKNAYKVIE---A--GANALVAGSAVFGAPDY 216 (230)
T ss_dssp CCEEEEESSCCTTTHHHHHH---H--TCCEEEESHHHHTSSCH
T ss_pred CceEEEECCCCHHHHHHHHH---c--CCCEEEEChhhhCCCCH
Confidence 45688999999765555432 2 34666666777765443
No 21
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=49.30 E-value=5.9 Score=26.54 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=29.3
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccCh---HHHHHHHh
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTP---EDFLNNLS 71 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~---~~fl~~l~ 71 (75)
.+-|.+.||++-+.+..+.+ . +.++++.|+.|.+. ..-++.|.
T Consensus 173 ~~~I~v~GGI~~~~~~~~~~---a--Gad~vvvGSai~~a~d~~~~~~~l~ 218 (230)
T 1tqj_A 173 DPWIEVDGGLKPNNTWQVLE---A--GANAIVAGSAVFNAPNYAEAIAGVR 218 (230)
T ss_dssp CCEEEEESSCCTTTTHHHHH---H--TCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred CCcEEEECCcCHHHHHHHHH---c--CCCEEEECHHHHCCCCHHHHHHHHH
Confidence 56788999999876666543 2 46778888888864 34455543
No 22
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=46.38 E-value=5.7 Score=27.44 Aligned_cols=45 Identities=16% Similarity=0.180 Sum_probs=30.4
Q ss_pred CCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccC---hHHHHHHHh
Q psy8628 22 VPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMT---PEDFLNNLS 71 (75)
Q Consensus 22 ~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~---~~~fl~~l~ 71 (75)
+..+.|-|-||++-+.+..+. + . +.++++.|+.|.+ |.+-++++.
T Consensus 193 ~~~~~I~VDGGI~~~ti~~~~---~-a-GAD~~V~GSaIf~a~dp~~~i~~l~ 240 (246)
T 3inp_A 193 DRDILLEIDGGVNPYNIAEIA---V-C-GVNAFVAGSAIFNSDSYKQTIDKMR 240 (246)
T ss_dssp TSCCEEEEESSCCTTTHHHHH---T-T-TCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred CCCeeEEEECCcCHHHHHHHH---H-c-CCCEEEEehHHhCCCCHHHHHHHHH
Confidence 345778999999976655543 3 2 6788888888885 444444443
No 23
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=45.03 E-value=64 Score=21.22 Aligned_cols=31 Identities=19% Similarity=0.226 Sum_probs=22.0
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst 58 (75)
.|+|.||..+-=...++.|.+. +.+|++.+-
T Consensus 20 ~vlVTGasggIG~~la~~l~~~--G~~V~~~~r 50 (303)
T 1yxm_A 20 VAIVTGGATGIGKAIVKELLEL--GSNVVIASR 50 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred EEEEECCCcHHHHHHHHHHHHC--CCEEEEEeC
Confidence 4788999988766666777664 567777654
No 24
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=43.96 E-value=6 Score=25.38 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=25.7
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccCh---HHHHHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTP---EDFLNNL 70 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~---~~fl~~l 70 (75)
.+-|.+.||++-+.+..+ .+ . +.+.++.|+.|..+ .+.++++
T Consensus 159 ~~~i~~~gGI~~~~~~~~---~~-~-Gad~vvvGsai~~~~d~~~~~~~l 203 (211)
T 3f4w_A 159 KARIAVAGGISSQTVKDY---AL-L-GPDVVIVGSAITHAADPAGEARKI 203 (211)
T ss_dssp SCEEEEESSCCTTTHHHH---HT-T-CCSEEEECHHHHTCSSHHHHHHHH
T ss_pred CCcEEEECCCCHHHHHHH---HH-c-CCCEEEECHHHcCCCCHHHHHHHH
Confidence 467788999995544443 33 2 46667777777754 4444444
No 25
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=43.27 E-value=20 Score=25.33 Aligned_cols=43 Identities=14% Similarity=0.367 Sum_probs=29.3
Q ss_pred eEEEEEECCC-CHHHHHHHHHHHhhcCCceEEEeccccc---ChHHHHHHHh
Q psy8628 24 RLIVFIIGGV-SFSEIRCAYEVTNNVKNWEVIIGSSHIM---TPEDFLNNLS 71 (75)
Q Consensus 24 ~iiVFvvGGi-Ty~E~~~i~~l~~~~~~~~iiiGst~il---~~~~fl~~l~ 71 (75)
.++++..||+ |.+.+..+.+. +.+-++-|+.|. +|...+++|.
T Consensus 209 PVivvA~GGI~t~~dv~~~~~~-----GAdgVlVGsai~~a~dp~~~~~~l~ 255 (297)
T 4adt_A 209 PVVNFAAGGIATPADAAMCMQL-----GMDGVFVGSGIFESENPQKMASSIV 255 (297)
T ss_dssp SSEEEEESCCCSHHHHHHHHHT-----TCSCEEESHHHHTSSCHHHHHHHHH
T ss_pred CeEEEecCCCCCHHHHHHHHHc-----CCCEEEEhHHHHcCCCHHHHHHHHH
Confidence 3677899999 88877776543 345555556777 6777666654
No 26
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=42.25 E-value=62 Score=20.30 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=32.4
Q ss_pred CCCeEEEEEECCCCHHHHH--HHHHHHhhcCCceEEEecccccChHHHHHHHhcC
Q psy8628 21 NVPRLIVFIIGGVSFSEIR--CAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNL 73 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E~~--~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l 73 (75)
.+++++++-+||=.+ ++. .+..+-+. .+++|+..|.. .+++++++.+.+.
T Consensus 17 ~~~~vlla~~~gd~H-diG~~~va~~l~~-~G~eVi~lG~~-~p~e~lv~aa~~~ 68 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGH-DRGAKVVARALRD-AGFEVVYTGLR-QTPEQVAMAAVQE 68 (161)
T ss_dssp CSCEEEEEEESSSSC-CHHHHHHHHHHHH-TTCEEECCCSB-CCHHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCcc-HHHHHHHHHHHHH-CCCEEEECCCC-CCHHHHHHHHHhc
Confidence 567899999998544 332 22222232 37899876655 5888888877653
No 27
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=39.73 E-value=15 Score=23.85 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=23.8
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccCh
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTP 63 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~ 63 (75)
.+-|+..||+|.+.+..+.+ . +.+.+..|+.+...
T Consensus 164 ~~pvia~GGI~~~nv~~~~~----~-Ga~gv~vgs~i~~~ 198 (221)
T 1yad_A 164 SIPVIAIGGMTPDRLRDVKQ----A-GADGIAVMSGIFSS 198 (221)
T ss_dssp CSCEEEESSCCGGGHHHHHH----T-TCSEEEESHHHHTS
T ss_pred CCCEEEECCCCHHHHHHHHH----c-CCCEEEEhHHhhCC
Confidence 34588999999887777654 2 45666666666643
No 28
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=38.38 E-value=19 Score=17.91 Aligned_cols=24 Identities=21% Similarity=0.147 Sum_probs=17.2
Q ss_pred CCCHHHHHHHHHHHhhcCCceEEEe
Q psy8628 32 GVSFSEIRCAYEVTNNVKNWEVIIG 56 (75)
Q Consensus 32 GiTy~E~~~i~~l~~~~~~~~iiiG 56 (75)
|.|-+|.+.+.+-+++. +.+|...
T Consensus 11 ggtpeelkklkeeakka-nirvtfw 34 (36)
T 2ki0_A 11 GGTPEELKKLKEEAKKA-NIRVTFW 34 (36)
T ss_dssp CCCHHHHHHHHHHHHHH-CCCCCBC
T ss_pred cCCHHHHHHHHHHHHhc-cEEEEee
Confidence 56899999998877764 5555443
No 29
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=38.11 E-value=14 Score=23.48 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=22.6
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccC
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMT 62 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~ 62 (75)
.+-|+..||++-+.+..+. +. +.+.+..|+.+..
T Consensus 150 ~~pvia~GGI~~~~~~~~~---~~--Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 150 NVKFVPTGGVNLDNVCEWF---KA--GVLAVGVGSALVK 183 (205)
T ss_dssp TCEEEEBSSCCTTTHHHHH---HH--TCSCEEECHHHHC
T ss_pred CCcEEEcCCCCHHHHHHHH---HC--CCCEEEECccccC
Confidence 6789999999965555443 32 3455666677765
No 30
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=38.08 E-value=42 Score=24.01 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHHHhhcCCceEEEecccccChH--HHHHHHh
Q psy8628 33 VSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE--DFLNNLS 71 (75)
Q Consensus 33 iTy~E~~~i~~l~~~~~~~~iiiGst~il~~~--~fl~~l~ 71 (75)
+|.+|++.+.+++++. ++.+.+|-..-.+|. +|++...
T Consensus 103 l~~~ea~~l~~~A~~~-g~~~~v~~~yr~~p~vr~~i~~~~ 142 (372)
T 4gmf_A 103 LHPDDISSLQTLAQEQ-GCCYWINTFYPHTRAGRTWLRDAQ 142 (372)
T ss_dssp CCHHHHHHHHHHHHHH-TCCEEEECSGGGSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCEEEEcCcccCCHHHHHHHHHHH
Confidence 4899999999999987 789999998888884 6776544
No 31
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=37.68 E-value=76 Score=20.60 Aligned_cols=43 Identities=12% Similarity=0.217 Sum_probs=28.2
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL 70 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l 70 (75)
.|+|.||...-=...++.|.+. +.+|++.+-+--..++.++++
T Consensus 14 ~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l 56 (311)
T 3o26_A 14 CAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKL 56 (311)
T ss_dssp EEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH
Confidence 5778898887666666777664 568888765544444555554
No 32
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=36.38 E-value=15 Score=24.17 Aligned_cols=10 Identities=40% Similarity=0.903 Sum_probs=7.8
Q ss_pred eEEEEEECCC
Q psy8628 24 RLIVFIIGGV 33 (75)
Q Consensus 24 ~iiVFvvGGi 33 (75)
.=|+|||||.
T Consensus 101 ~~i~FvIGGa 110 (167)
T 1to0_A 101 SKVTFVIGGS 110 (167)
T ss_dssp CEEEEEECCS
T ss_pred ceEEEEEECC
Confidence 3589999984
No 33
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=35.79 E-value=16 Score=23.09 Aligned_cols=50 Identities=14% Similarity=0.229 Sum_probs=27.6
Q ss_pred CCCeEEEEEE-C----CCCHHHHHHHHHHHhhc--CCceEE--EecccccChHHHHHHH
Q psy8628 21 NVPRLIVFII-G----GVSFSEIRCAYEVTNNV--KNWEVI--IGSSHIMTPEDFLNNL 70 (75)
Q Consensus 21 ~~~~iiVFvv-G----GiTy~E~~~i~~l~~~~--~~~~ii--iGst~il~~~~fl~~l 70 (75)
.++.+++|+. + +|+.+|+..+.++.+++ .+.+|+ |..+..-+-+.|+++.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~ 100 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAH 100 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHh
Confidence 4555555443 4 55556777777766553 256665 4444444445565543
No 34
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=35.22 E-value=18 Score=22.98 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=22.2
Q ss_pred EEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChH
Q psy8628 25 LIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64 (75)
Q Consensus 25 iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~ 64 (75)
+-|.+.||++-+.+..+ .+. +.+.++-|+.|..+.
T Consensus 159 ~pi~v~GGI~~~~~~~~---~~a--Gad~vvvGsaI~~~~ 193 (207)
T 3ajx_A 159 VPFSVAGGVKVATIPAV---QKA--GAEVAVAGGAIYGAA 193 (207)
T ss_dssp SCEEEESSCCGGGHHHH---HHT--TCSEEEESHHHHTSS
T ss_pred CCEEEECCcCHHHHHHH---HHc--CCCEEEEeeeccCCC
Confidence 45788999996544443 222 456777777777644
No 35
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=34.25 E-value=52 Score=24.64 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=25.5
Q ss_pred CCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 21 NVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
+|++=+++|+||.-.+. +..+..|.++- -.++|||
T Consensus 191 ~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGG 226 (403)
T 3q3v_A 191 HPARPFVAVVGGSKVSGKLQALTNLLPKV--DKLIIGG 226 (403)
T ss_dssp CCCSSEEEEECSSCHHHHHHHHHHHTTTC--SEEEECS
T ss_pred CCCCceEEEEeCccHHHHHHHHHHHHHhc--CEEEECc
Confidence 56777999999999987 55565665542 2777776
No 36
>4fmw_A RNA (guanine-9-)-methyltransferase domain-contain protein 2; structural genomics, structural genomics consortium, SGC, RN modification; HET: SAH; 2.00A {Homo sapiens}
Probab=34.04 E-value=14 Score=24.70 Aligned_cols=44 Identities=11% Similarity=0.232 Sum_probs=21.8
Q ss_pred EEEECCC---------CHHHHHHHHHHHhhcC-CceEEEecccccChHHHHHHH
Q psy8628 27 VFIIGGV---------SFSEIRCAYEVTNNVK-NWEVIIGSSHIMTPEDFLNNL 70 (75)
Q Consensus 27 VFvvGGi---------Ty~E~~~i~~l~~~~~-~~~iiiGst~il~~~~fl~~l 70 (75)
||||||+ ||.-++..---..++| +.-+-..+..+||-++.++=|
T Consensus 122 vYIIGGiVD~n~~K~lt~~~A~~~gi~taRLPi~~~i~~~~~kvLtiN~V~eIL 175 (197)
T 4fmw_A 122 AYVIGGLVDHNHHKGLTYKQASDYGINHAQLPLGNFVKMNSRKVLAVNHVFEII 175 (197)
T ss_dssp EEEEECCCCTTSSTTHHHHHHHHHTCEEEBCCCTTTC----CCCCCHHHHHHHH
T ss_pred EEEEEEEEeCCCCcchhHHHHHHcCCCEEeccccceeecCCCccccHHHHHHHH
Confidence 7999965 5554433210011222 122445677888888877654
No 37
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=34.00 E-value=15 Score=23.81 Aligned_cols=8 Identities=38% Similarity=0.929 Sum_probs=6.9
Q ss_pred EEEEECCC
Q psy8628 26 IVFIIGGV 33 (75)
Q Consensus 26 iVFvvGGi 33 (75)
|+|||||.
T Consensus 98 i~FvIGG~ 105 (155)
T 1ns5_A 98 VSLLIGGP 105 (155)
T ss_dssp EEEEECBT
T ss_pred EEEEEECC
Confidence 88999984
No 38
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=33.37 E-value=18 Score=23.76 Aligned_cols=9 Identities=44% Similarity=0.711 Sum_probs=7.3
Q ss_pred EEEEEECCC
Q psy8628 25 LIVFIIGGV 33 (75)
Q Consensus 25 iiVFvvGGi 33 (75)
=|+|||||.
T Consensus 96 ~i~FvIGGa 104 (163)
T 1o6d_A 96 DITILIGGP 104 (163)
T ss_dssp CEEEEECCT
T ss_pred eEEEEEECC
Confidence 388999984
No 39
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=32.69 E-value=68 Score=23.69 Aligned_cols=44 Identities=23% Similarity=0.208 Sum_probs=29.4
Q ss_pred EEEEC-CCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHhcC
Q psy8628 27 VFIIG-GVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLSNL 73 (75)
Q Consensus 27 VFvvG-GiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~~l 73 (75)
|+++| |.||--.+.+++.-+. ....+.+.++ +.|..+.+.+..|
T Consensus 69 Vv~iGIGGS~LG~~~~~~aL~~-~~~~~~~~~n--~dp~~~~~~l~~l 113 (415)
T 1zzg_A 69 FVLIGIGGSALGPKALEAAFNE-SGVRFHYLDH--VEPEPILRLLRTL 113 (415)
T ss_dssp EEEECCGGGTHHHHHHHHHHCC-SCCEEEEECS--CCHHHHHHHHHHS
T ss_pred EEEEccCccHHHHHHHHHHHhc-CCCceEEecC--CCHHHHHHHHhhC
Confidence 44455 7788888888876543 3567777755 6787776666554
No 40
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=32.64 E-value=59 Score=21.69 Aligned_cols=43 Identities=19% Similarity=-0.031 Sum_probs=31.0
Q ss_pred eEEEEEECCC-CHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHh
Q psy8628 24 RLIVFIIGGV-SFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLS 71 (75)
Q Consensus 24 ~iiVFvvGGi-Ty~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~ 71 (75)
.+-|.-.||+ |.+.++.+.++ +.+-++-|+.|.+|..+.+.+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~-----GadgV~VGsai~~p~~~~~~f~ 224 (229)
T 3q58_A 181 GCRVIAEGRYNTPALAANAIEH-----GAWAVTVGSAITRIEHICQWFS 224 (229)
T ss_dssp TCCEEEESSCCSHHHHHHHHHT-----TCSEEEECHHHHCHHHHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHc-----CCCEEEEchHhcChHHHHHHHH
Confidence 6778899999 68878777543 3344444588999998877664
No 41
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=32.44 E-value=61 Score=21.62 Aligned_cols=43 Identities=16% Similarity=-0.079 Sum_probs=30.7
Q ss_pred eEEEEEECCC-CHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHh
Q psy8628 24 RLIVFIIGGV-SFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLS 71 (75)
Q Consensus 24 ~iiVFvvGGi-Ty~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~ 71 (75)
.+-|.-.||+ |.+.++.+.++ +.+-++-|+.|.+|.+..+.+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~-----GadgV~VGsal~~p~~~~~~~~ 224 (232)
T 3igs_A 181 GCRVIAEGRYNSPALAAEAIRY-----GAWAVTVGSAITRLEHICGWYN 224 (232)
T ss_dssp TCCEEEESCCCSHHHHHHHHHT-----TCSEEEECHHHHCHHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHc-----CCCEEEEehHhcCHHHHHHHHH
Confidence 5678899999 68878777543 3344444588889988777664
No 42
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=32.40 E-value=16 Score=23.86 Aligned_cols=12 Identities=42% Similarity=0.686 Sum_probs=9.0
Q ss_pred CCCeEEEEEECC
Q psy8628 21 NVPRLIVFIIGG 32 (75)
Q Consensus 21 ~~~~iiVFvvGG 32 (75)
.+..=|+|||||
T Consensus 102 ~g~~~i~FvIGG 113 (163)
T 4fak_A 102 QGQSDFVFVIGG 113 (163)
T ss_dssp TTCCEEEEEECB
T ss_pred cCCcceEEEEEC
Confidence 344568999998
No 43
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=32.14 E-value=58 Score=19.74 Aligned_cols=20 Identities=15% Similarity=-0.051 Sum_probs=15.9
Q ss_pred eEEEEEECCCCHHHHHHHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYE 43 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~ 43 (75)
+=++||.||+-..=+.++.+
T Consensus 19 ~~~llIaGG~GiaPl~sm~~ 38 (142)
T 3lyu_A 19 GKILAIGAYTGIVEVYPIAK 38 (142)
T ss_dssp SEEEEEEETTHHHHHHHHHH
T ss_pred CeEEEEECcCcHHHHHHHHH
Confidence 34799999999888877654
No 44
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=32.04 E-value=13 Score=23.61 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=20.3
Q ss_pred EEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccC
Q psy8628 25 LIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMT 62 (75)
Q Consensus 25 iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~ 62 (75)
+-|++.||++.+.++.+. + . +.+.+..|+.+..
T Consensus 163 ~pvia~GGI~~~nv~~~~---~-~-Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 163 IPVVAIGGINKDNAREVL---K-T-GVDGIAVISAVMG 195 (215)
T ss_dssp SCEEEESSCCTTTHHHHH---T-T-TCSEEEESHHHHT
T ss_pred CCEEEECCcCHHHHHHHH---H-c-CCCEEEEhHHHhC
Confidence 347889999966555543 2 2 4455655566654
No 45
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.99 E-value=92 Score=20.15 Aligned_cols=32 Identities=9% Similarity=0.091 Sum_probs=23.5
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.|+|.||...-=...++.|.+. +.+|++.+-+
T Consensus 31 ~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~ 62 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSL--GARVVLTARD 62 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred EEEEECCCChHHHHHHHHHHHC--CCEEEEEECC
Confidence 5789999988766777777764 5678776544
No 46
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=31.98 E-value=95 Score=19.61 Aligned_cols=32 Identities=9% Similarity=0.125 Sum_probs=22.3
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.++|.||...-=...++.|.+. +.+|++.+-+
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~ 47 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAH--GASVVLLGRT 47 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred EEEEeCCCChHHHHHHHHHHHC--CCEEEEEecC
Confidence 5778998887666666777664 5677776544
No 47
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=31.93 E-value=19 Score=21.93 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=23.0
Q ss_pred CCCeEEEEEE-C----CCCHHHHHHHHHHHhhc--CCce-EEEecc
Q psy8628 21 NVPRLIVFII-G----GVSFSEIRCAYEVTNNV--KNWE-VIIGSS 58 (75)
Q Consensus 21 ~~~~iiVFvv-G----GiTy~E~~~i~~l~~~~--~~~~-iiiGst 58 (75)
.++.++|++. + .|++.|+..+.++.+++ .+.+ |+--|.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~ 79 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISV 79 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 4566777766 5 33346888777776554 3566 655444
No 48
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=31.68 E-value=1.1e+02 Score=20.44 Aligned_cols=30 Identities=17% Similarity=0.201 Sum_probs=21.8
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEec
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGs 57 (75)
.++|.||...-=...++.|.+. +.+|++.+
T Consensus 30 ~~lVTGas~GIG~aia~~la~~--G~~V~~~~ 59 (299)
T 3t7c_A 30 VAFITGAARGQGRSHAITLARE--GADIIAID 59 (299)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence 5788999887666666777764 56777754
No 49
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=30.51 E-value=1e+02 Score=19.48 Aligned_cols=32 Identities=9% Similarity=0.122 Sum_probs=20.8
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.++|.||...-=...++.|.+. +.+|++.+.+
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~ 38 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASK--GATVVGTATS 38 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred EEEEECCCChHHHHHHHHHHHC--CCEEEEEeCC
Confidence 4678888877655666666654 5677666543
No 50
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=30.31 E-value=1.1e+02 Score=19.49 Aligned_cols=31 Identities=10% Similarity=0.062 Sum_probs=21.5
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst 58 (75)
.|+|.||...-=...++.|.+. +.+|++.+-
T Consensus 11 ~vlITGas~giG~~~a~~l~~~--G~~V~~~~r 41 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALARE--GAAVVVADI 41 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred EEEEECCCChHHHHHHHHHHHC--CCEEEEEcC
Confidence 5778898887666666777664 567777554
No 51
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=30.31 E-value=63 Score=24.12 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=25.3
Q ss_pred CCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 21 NVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
+|++=+++|+||.-.+. +..+..|.++- -.++|||
T Consensus 183 ~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGG 218 (398)
T 1vpe_A 183 NPEKPYVVVLGGAKVSDKIGVITNLMEKA--DRILIGG 218 (398)
T ss_dssp CCCSSEEEEECSSCHHHHHHHHHHHTTTC--SEEEECT
T ss_pred CCCCCeEEEEcCcchhhHHHHHHHHHHhc--CeeEeCc
Confidence 56677999999999987 66666665543 2677776
No 52
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=30.10 E-value=1.3e+02 Score=22.69 Aligned_cols=50 Identities=10% Similarity=0.102 Sum_probs=33.0
Q ss_pred EEEEECC-CCHHHHHHHHHHHh-hcCCceEEEecccccC---------hHHHHHHHhcCCC
Q psy8628 26 IVFIIGG-VSFSEIRCAYEVTN-NVKNWEVIIGSSHIMT---------PEDFLNNLSNLSV 75 (75)
Q Consensus 26 iVFvvGG-iTy~E~~~i~~l~~-~~~~~~iiiGst~il~---------~~~fl~~l~~l~~ 75 (75)
+||+-.| -+.+|++.+.+--. ..|..-+.++.+-.+| -..|.++|.+|++
T Consensus 286 ~if~E~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~~~~~~~~~~f~~eL~~lGv 346 (439)
T 3i4e_A 286 LIWCETGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKKNLDDATIAKFQKELGAMGY 346 (439)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHTHHHHHHHHTC
T ss_pred EEEecCCCCCHHHHHHHHHHhcccCCceEEeeCCCCCCcCcccCCHHHHHHHHHHHHHcCC
Confidence 5688566 59999998876433 3554445566666666 3457788877653
No 53
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=29.51 E-value=1.1e+02 Score=19.44 Aligned_cols=46 Identities=13% Similarity=0.302 Sum_probs=28.7
Q ss_pred CeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEec-ccccChHHHHHHH
Q psy8628 23 PRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGS-SHIMTPEDFLNNL 70 (75)
Q Consensus 23 ~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGs-t~il~~~~fl~~l 70 (75)
+.=.|+|.||...-=...++.|.+. +.+|++.. ..--.....++++
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~ 58 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQ 58 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHH
Confidence 3346788999988777777777765 67887765 3333334444443
No 54
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=29.28 E-value=66 Score=23.98 Aligned_cols=35 Identities=31% Similarity=0.431 Sum_probs=25.2
Q ss_pred CCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 21 NVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
+|++=+++|+||.-.+. +..+..|.++- -.++|||
T Consensus 184 ~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGG 219 (394)
T 1php_A 184 NPDRPFTAIIGGAKVKDKIGVIDNLLEKV--DNLIIGG 219 (394)
T ss_dssp SCCSSEEEEECSSCHHHHHHHHHHHTTTC--SEEEECT
T ss_pred CCCCCeEEEEcCcchhhHHHHHHHHHHhc--CeeeeCc
Confidence 56677999999999987 66666665543 2677775
No 55
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=29.26 E-value=53 Score=24.54 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=25.3
Q ss_pred CCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 21 NVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
+|++=+++|+||.-.+. +..+..|.++- -+++|||
T Consensus 183 ~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGG 218 (395)
T 4fey_A 183 SPKKPMAAIVGGSKVSTKLSVLNNLLDKV--EILIVGG 218 (395)
T ss_dssp SCCSSEEEEEEESCHHHHHHHHHHHTTTC--SEEEEEE
T ss_pred CCCCceEEEEeCccHHHHHHHHHHHHHhc--CEEEECh
Confidence 56777999999999987 55565565542 2777775
No 56
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=29.25 E-value=1.2e+02 Score=19.78 Aligned_cols=43 Identities=16% Similarity=0.057 Sum_probs=26.4
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL 70 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l 70 (75)
.|+|.||...-=...++.|.++ +.+|++.+-+--..++..+++
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l 55 (281)
T 3svt_A 13 TYLVTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQEL 55 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH
Confidence 5778999888766666777664 567777654333333334443
No 57
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=28.68 E-value=1.2e+02 Score=19.66 Aligned_cols=43 Identities=14% Similarity=0.109 Sum_probs=25.6
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL 70 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l 70 (75)
.++|.||...-=...++.|.++ +.+|++.+-+--..++..+++
T Consensus 12 ~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l 54 (262)
T 3pk0_A 12 SVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADL 54 (262)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH
Confidence 4678888887666666666654 567777654433333334433
No 58
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=28.63 E-value=15 Score=25.00 Aligned_cols=42 Identities=19% Similarity=0.280 Sum_probs=26.9
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccC---hHHHHHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMT---PEDFLNNL 70 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~---~~~fl~~l 70 (75)
.+-|+.+||+|.+.+..+.+. +.+-+..++.|.. |..-+++|
T Consensus 191 ~iPvvAiGGI~~~ni~~~~~a-----Ga~gvav~sai~~a~dp~~a~~~l 235 (243)
T 3o63_A 191 DKPWFAIGGINAQRLPAVLDA-----GARRIVVVRAITSADDPRAAAEQL 235 (243)
T ss_dssp CCCEEEESSCCTTTHHHHHHT-----TCCCEEESHHHHTCSSHHHHHHHH
T ss_pred CCCEEEecCCCHHHHHHHHHc-----CCCEEEEeHHHhCCCCHHHHHHHH
Confidence 567999999998887776542 3444555556664 44444444
No 59
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=28.27 E-value=1.3e+02 Score=19.77 Aligned_cols=43 Identities=14% Similarity=0.075 Sum_probs=27.3
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL 70 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l 70 (75)
.++|.||...-=...++.|.++ +.+|++.+-+--..++..+++
T Consensus 26 ~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l 68 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGL 68 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH
Confidence 5789999888666667777764 577877654433333334433
No 60
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=27.97 E-value=1.2e+02 Score=19.22 Aligned_cols=31 Identities=19% Similarity=0.398 Sum_probs=22.1
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst 58 (75)
.|+|.||..+-=...++.|.++ +.+|++.+-
T Consensus 15 ~vlItGasggiG~~la~~l~~~--G~~V~~~~r 45 (260)
T 3awd_A 15 VAIVTGGAQNIGLACVTALAEA--GARVIIADL 45 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred EEEEeCCCchHHHHHHHHHHHC--CCEEEEEeC
Confidence 4678899988776777777764 567777654
No 61
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=27.96 E-value=13 Score=24.25 Aligned_cols=39 Identities=15% Similarity=0.189 Sum_probs=24.7
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFL 67 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl 67 (75)
.+-|.+.||++.+.+..+ .+ . +.+.++-|+.|..+.+-.
T Consensus 166 ~~pi~v~GGI~~~~~~~~---~~-a-GAd~vvvGsaI~~a~dp~ 204 (218)
T 3jr2_A 166 GIELSITGGIVPEDIYLF---EG-I-KTKTFIAGRALAGAEGQQ 204 (218)
T ss_dssp TCEEEEESSCCGGGGGGG---TT-S-CEEEEEESGGGSHHHHHH
T ss_pred CCCEEEECCCCHHHHHHH---HH-c-CCCEEEEchhhcCCCCHH
Confidence 455788899986655442 11 2 567777777888655443
No 62
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=27.73 E-value=1.4e+02 Score=19.99 Aligned_cols=44 Identities=14% Similarity=0.069 Sum_probs=30.1
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHh
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLS 71 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~ 71 (75)
.|+|.||...-=...++.|.+. +.+|++.+-+--..++..+++.
T Consensus 43 ~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~ 86 (293)
T 3rih_A 43 SVLVTGGTKGIGRGIATVFARA--GANVAVAARSPRELSSVTAELG 86 (293)
T ss_dssp EEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHH
Confidence 5788999888766677777764 5788887655444455555553
No 63
>3hxi_C Eukaryotic translation initiation factor 4E- binding protein 1; protein-mRNA CAP complex, acetylation, phosphoprotein, protein synthesis inhibitor; HET: GTG; 1.80A {Homo sapiens} PDB: 3hxg_C*
Probab=27.62 E-value=25 Score=15.87 Aligned_cols=18 Identities=33% Similarity=0.451 Sum_probs=14.0
Q ss_pred ecccccChHHHHHHHhcC
Q psy8628 56 GSSHIMTPEDFLNNLSNL 73 (75)
Q Consensus 56 Gst~il~~~~fl~~l~~l 73 (75)
|||.|+=-..|+-++.+-
T Consensus 2 GGTrIiYdR~fLl~~rnS 19 (21)
T 3hxi_C 2 GSGRIIYDRKFLMECRNS 19 (26)
T ss_pred CceEEEEeHHHHHHhccC
Confidence 688888888888877653
No 64
>1lqv_C Vitamin-K dependent protein C; GLA (gamma-carboxyglutamic acid) residues, phospholipid BIND groove, Ca ION binding, blood clotting; HET: CGU NAG NDG PTY; 1.60A {Homo sapiens} SCOP: g.32.1.1 PDB: 3jtc_C*
Probab=27.48 E-value=25 Score=17.52 Aligned_cols=10 Identities=20% Similarity=0.484 Sum_probs=8.2
Q ss_pred CCHHHHHHHH
Q psy8628 33 VSFSEIRCAY 42 (75)
Q Consensus 33 iTy~E~~~i~ 42 (75)
++|+|++.+.
T Consensus 22 Cs~EEarEvf 31 (33)
T 1lqv_C 22 CDFEEAKEIF 31 (33)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 6899998874
No 65
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=27.41 E-value=1.2e+02 Score=19.04 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=21.2
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.++|.||...-=...++.|.+. +.+|++.+-+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~ 35 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARD--GYALALGARS 35 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 4678888887666666666654 5677776544
No 66
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=27.39 E-value=13 Score=25.55 Aligned_cols=33 Identities=18% Similarity=0.422 Sum_probs=26.9
Q ss_pred CCCHHHHHHHHHHHhhcCC--ceEEEecccccChH
Q psy8628 32 GVSFSEIRCAYEVTNNVKN--WEVIIGSSHIMTPE 64 (75)
Q Consensus 32 GiTy~E~~~i~~l~~~~~~--~~iiiGst~il~~~ 64 (75)
++-|.....+-|++..++. .-++||..+++||.
T Consensus 103 ~VPYd~v~EMdeIN~df~~tDv~lVIGANDvVNPa 137 (203)
T 2fsv_C 103 NVPYDEVFELEEINSSFQTADVAFVIGANDVTNPA 137 (203)
T ss_dssp TCCGGGEEEHHHHGGGSTTCSEEEEESCCGGGCGG
T ss_pred cCCHHHHhhHHHHhhhhhhcCEEEEeccccccCch
Confidence 7888888888888887664 45679999999996
No 67
>3tu3_B EXOU; type III secretion system, SPC infectious diseases, structural genomics, center for struct genomics of infectious diseases, csgid; 1.92A {Pseudomonas aeruginosa} PDB: 4akx_B*
Probab=27.38 E-value=25 Score=28.34 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=25.4
Q ss_pred EECCCCHHHHHHHHHHHhhcCCceEEEecccccChH
Q psy8628 29 IIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPE 64 (75)
Q Consensus 29 vvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~ 64 (75)
--|++||+|++.+...... .++++|++|++.+.+
T Consensus 284 ~~~~ITF~dL~~L~~~~P~--~k~L~IvATNL~TGk 317 (711)
T 3tu3_B 284 SGSGVTFGDLDRLSAYIPQ--IKTLNITGTAMFEGR 317 (711)
T ss_dssp TTCCCBHHHHHHHHTTCTT--SCEEEEEEEEEETTE
T ss_pred CCCCCCHHHHHHHhhcCCC--CceEEEEEEECCCCC
Confidence 4589999999887532221 368999999999885
No 68
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=27.19 E-value=1.1e+02 Score=18.51 Aligned_cols=46 Identities=7% Similarity=0.149 Sum_probs=25.6
Q ss_pred CCCeEEEEEECCCCHHHHHHHHHHHhhc--CCceEEEecccccChHHH
Q psy8628 21 NVPRLIVFIIGGVSFSEIRCAYEVTNNV--KNWEVIIGSSHIMTPEDF 66 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E~~~i~~l~~~~--~~~~iiiGst~il~~~~f 66 (75)
.++-+.+...=+-+..++..+.+.-++. ++..|++||.-++.+++|
T Consensus 54 ~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~ 101 (137)
T 1ccw_A 54 KADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHW 101 (137)
T ss_dssp TCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCH
T ss_pred CCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhh
Confidence 3444555555555555555554433332 247888888776655554
No 69
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=26.67 E-value=16 Score=23.46 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=20.5
Q ss_pred EEEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccC
Q psy8628 25 LIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMT 62 (75)
Q Consensus 25 iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~ 62 (75)
+=|+..||++.+.+..+.+ . +.+.+..|+.+..
T Consensus 173 ~pvia~GGI~~~nv~~~~~----~-Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 173 IPIVGIGGITIDNAAPVIQ----A-GADGVSMISAISQ 205 (227)
T ss_dssp CCEEEESSCCTTTSHHHHH----T-TCSEEEESHHHHT
T ss_pred CCEEEEcCCCHHHHHHHHH----c-CCCEEEEhHHhhc
Confidence 4588899999665555432 2 3455555566654
No 70
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=26.47 E-value=1e+02 Score=20.51 Aligned_cols=40 Identities=25% Similarity=0.273 Sum_probs=26.0
Q ss_pred EEEEECCC-CHHHHHHHHHHHhhcCCceEEEecccccChHHHHHH
Q psy8628 26 IVFIIGGV-SFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNN 69 (75)
Q Consensus 26 iVFvvGGi-Ty~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~ 69 (75)
=+-+=||+ |.+.++.+.+. +--+|+|||.-+-+|+-+-+.
T Consensus 77 pl~vGGGIrs~e~~~~~l~~----GadkVii~t~a~~~p~li~e~ 117 (243)
T 4gj1_A 77 NLQVGGGIRSKEEVKALLDC----GVKRVVIGSMAIKDATLCLEI 117 (243)
T ss_dssp EEEEESSCCCHHHHHHHHHT----TCSEEEECTTTTTCHHHHHHH
T ss_pred CeEeccccccHHHHHHHHHc----CCCEEEEccccccCCchHHHH
Confidence 36677888 55666655432 234889998888888755443
No 71
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=26.43 E-value=60 Score=24.19 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=26.5
Q ss_pred CCCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 20 KNVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 20 ~~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
.+|++=+++|+||.-.+. +..+..|.++- -.++|||
T Consensus 180 ~~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGG 216 (390)
T 1v6s_A 180 KDPERPYAVVLGGAKVSDKIGVIESLLPRI--DRLLIGG 216 (390)
T ss_dssp SSCCSSEEEEECCSCGGGTHHHHHHHGGGC--SEEEECS
T ss_pred cCCCCCeEEEEcCCchhhHHHHHHHHHHHh--ccceeCc
Confidence 356777999999999977 67777776653 2677776
No 72
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=26.25 E-value=99 Score=17.81 Aligned_cols=48 Identities=17% Similarity=0.051 Sum_probs=25.9
Q ss_pred CCCeEEEEEEC-CCC--HHHHHHHHHHHhhcCCceEEEecccccChHHHHH
Q psy8628 21 NVPRLIVFIIG-GVS--FSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLN 68 (75)
Q Consensus 21 ~~~~iiVFvvG-GiT--y~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~ 68 (75)
.++.++|+|-+ .|. -.|+..+.++.+++++.++.+-+-++-++++.-+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~ 73 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGN 73 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHH
Confidence 44555555554 232 3556667777766644455555555555555433
No 73
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii}
Probab=25.94 E-value=1.2e+02 Score=22.77 Aligned_cols=38 Identities=13% Similarity=0.299 Sum_probs=26.8
Q ss_pred CCCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 20 KNVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 20 ~~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
.+|++=+++|+||.-.+. +..+..|.++..--.++|||
T Consensus 186 ~~p~rP~vaIlGGaKVsdKi~vi~nLl~k~~vD~liiGG 224 (410)
T 2cun_A 186 YSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGG 224 (410)
T ss_dssp TCCCSCEEEEECSSCHHHHHHHHHHHHHTTSCSEEEECH
T ss_pred cCCCCCeEEEEcCcchhhHHHHHHHHhcccCCCEEEECh
Confidence 366777999999999987 66666666651112677776
No 74
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=25.76 E-value=48 Score=22.54 Aligned_cols=36 Identities=22% Similarity=0.170 Sum_probs=22.7
Q ss_pred EECCCCHHHHHHHHHHHhhcCCceEEEecccccC-----hHHHHHHH
Q psy8628 29 IIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMT-----PEDFLNNL 70 (75)
Q Consensus 29 vvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~-----~~~fl~~l 70 (75)
+=||++ ++ .+.++- .+--+|++||.-+-+ | ++++++
T Consensus 81 vgGGir-~~--~~~~~l--~Ga~~Viigs~a~~~~g~~~p-~~~~~~ 121 (260)
T 2agk_A 81 VGGGIN-DT--NCLEWL--KWASKVIVTSWLFTKEGHFQL-KRLERL 121 (260)
T ss_dssp EESSCC-TT--THHHHT--TTCSCEEECGGGBCTTCCBCH-HHHHHH
T ss_pred EeCCCC-HH--HHHHHh--cCCCEEEECcHHHhhcCCCCH-HHHHHH
Confidence 478888 44 444444 333488899888888 7 444444
No 75
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=25.72 E-value=48 Score=24.73 Aligned_cols=20 Identities=30% Similarity=0.180 Sum_probs=14.6
Q ss_pred CeEEEEEECCCCHHHHHHHH
Q psy8628 23 PRLIVFIIGGVSFSEIRCAY 42 (75)
Q Consensus 23 ~~iiVFvvGGiTy~E~~~i~ 42 (75)
=++++++-||.|++|++.+.
T Consensus 247 i~v~~~~~g~~t~~ei~~~~ 266 (492)
T 3u7q_A 247 LRCVAQWSGDGSISEIELTP 266 (492)
T ss_dssp CEEEEEEETTCCHHHHHHGG
T ss_pred CeEEEEeCCCCCHHHHHhhh
Confidence 35666677888888887764
No 76
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=25.71 E-value=70 Score=21.17 Aligned_cols=48 Identities=19% Similarity=0.362 Sum_probs=20.0
Q ss_pred CCCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEecc
Q psy8628 8 GHWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 8 ~~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst 58 (75)
-+|+..-.......-++ .++|.||...-=...++.|.+. +.+|++.+-
T Consensus 6 ~~~~~~~~~~~~~~~~k-~vlVTGas~gIG~aia~~La~~--G~~V~~~~r 53 (272)
T 2nwq_A 6 HHHHSSGLVPRGSHMSS-TLFITGATSGFGEACARRFAEA--GWSLVLTGR 53 (272)
T ss_dssp ---------------CC-EEEESSTTTSSHHHHHHHHHHT--TCEEEEEES
T ss_pred cccccCcccccCCCcCc-EEEEeCCCCHHHHHHHHHHHHC--CCEEEEEEC
Confidence 47777444221111122 5778887666444455556554 567777654
No 77
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=25.67 E-value=32 Score=22.37 Aligned_cols=33 Identities=6% Similarity=0.303 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHHhh-cCCceEEEecccccChHHHHHHHhcCC
Q psy8628 33 VSFSEIRCAYEVTNN-VKNWEVIIGSSHIMTPEDFLNNLSNLS 74 (75)
Q Consensus 33 iTy~E~~~i~~l~~~-~~~~~iiiGst~il~~~~fl~~l~~l~ 74 (75)
+|-.|+.+.+. +. . |++..++|+++++.+..|.
T Consensus 40 I~L~dl~~~~n--ra~R-------~g~~lISp~Dl~~A~~~l~ 73 (169)
T 1u5t_B 40 ITLVDLYAMYN--KSMR-------IGTGLISPMEMREACERFE 73 (169)
T ss_dssp EETTHHHHHHH--HTTT-------SSSCCCCHHHHHHHHTTTG
T ss_pred EEHHHHHHHHH--Hhhc-------CCCCccCHHHHHHHHHHHH
Confidence 57777777653 22 2 1678999999999988763
No 78
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=25.58 E-value=1.3e+02 Score=22.41 Aligned_cols=38 Identities=21% Similarity=0.395 Sum_probs=27.1
Q ss_pred CCCeEEEEEECC--CCHHHHHHHHHHHhh--cCCceEEEecc
Q psy8628 21 NVPRLIVFIIGG--VSFSEIRCAYEVTNN--VKNWEVIIGSS 58 (75)
Q Consensus 21 ~~~~iiVFvvGG--iTy~E~~~i~~l~~~--~~~~~iiiGst 58 (75)
.-+.++|.|.|| +|..|+..+.+.-++ -+..+|+.|..
T Consensus 262 gAkgvLvnItgg~dl~l~Ev~~~~~~i~~~~~~~a~ii~G~~ 303 (396)
T 4dxd_A 262 GAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNMIFGTV 303 (396)
T ss_dssp TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHSSCCEEEEEEE
T ss_pred hhcceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCCeEEEeee
Confidence 346799999986 889998877665443 24568888754
No 79
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=25.40 E-value=1.5e+02 Score=19.44 Aligned_cols=47 Identities=13% Similarity=0.138 Sum_probs=23.1
Q ss_pred CCcCCCcccccCCCCeEEEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 9 HWHKDRAQQQVKNVPRLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 9 ~w~~~~~~~~~~~~~~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.|++.++....-+.+ .++|.||...-=...++.|.+. +.+|++.+-+
T Consensus 10 ~~~~~~~~~~~l~~k--~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~ 56 (288)
T 2x9g_A 10 HSSGLVPRGSHMEAP--AAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHN 56 (288)
T ss_dssp ------------CCC--EEEETTCSSHHHHHHHHHHHHH--TCEEEEEESS
T ss_pred cccccCCCCcCCCCC--EEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCC
Confidence 455544433333333 4788898887666666667664 5677776543
No 80
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=25.08 E-value=58 Score=24.49 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=26.1
Q ss_pred CCCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 20 KNVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 20 ~~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
.+|++=+|.|+||.-.+. +..+..|.++- -.++|||
T Consensus 201 ~~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGG 237 (415)
T 16pk_A 201 GNPPRPLVAIVGGAKVSDKIQLLDNMLQRI--DYLLIGG 237 (415)
T ss_dssp SCCCSSEEEEECSSCSGGGHHHHHHHGGGC--SEEEECT
T ss_pred cCCCCCeEEEEcCcchhhHHHHHHHHHHhc--CeeEeCc
Confidence 356677899999999877 66666676653 2677776
No 81
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=25.05 E-value=1.3e+02 Score=22.42 Aligned_cols=45 Identities=16% Similarity=0.129 Sum_probs=28.4
Q ss_pred EEEEC-CCCHHHHHHHHHHHhhcC-----------CceEEEecccccChHHHHHHHhcC
Q psy8628 27 VFIIG-GVSFSEIRCAYEVTNNVK-----------NWEVIIGSSHIMTPEDFLNNLSNL 73 (75)
Q Consensus 27 VFvvG-GiTy~E~~~i~~l~~~~~-----------~~~iiiGst~il~~~~fl~~l~~l 73 (75)
|+++| |.||--.+.+++.-+... ...+.+.++ +.|..+.+.+..|
T Consensus 81 Vv~IGIGGS~LG~~~~~~aL~~~~~~~~~~~~~~~~~~v~~~~n--vdp~~~~~~l~~L 137 (460)
T 2q8n_A 81 VVVLGIGGSGLGNLALHYSLRPLNWNEMTREERNGYARVFVVDN--VDPDLMSSVLDRI 137 (460)
T ss_dssp EEEECCGGGTHHHHHHHHHHSCTTGGGSCTTTTTTCCEEEEECS--CCHHHHHHHHTTC
T ss_pred EEEEecCchHHHHHHHHHHHHhhhhcccccccccCCcceEEecC--CCHHHHHHHHhcC
Confidence 44455 777877888877544221 356777644 6777777776655
No 82
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=24.92 E-value=49 Score=24.89 Aligned_cols=35 Identities=31% Similarity=0.500 Sum_probs=25.4
Q ss_pred CCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 21 NVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
+|++=+++|+||.-.+. +..+..|.++- -.++|||
T Consensus 204 ~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGG 239 (417)
T 3oz7_A 204 NPQRPLLAILGGAKVSDKIQLIKNLLDKV--DRMIIGG 239 (417)
T ss_dssp SCCSSEEEEEECSCSTTSHHHHHHHHTTC--SEEEEET
T ss_pred CCCCceEEEEeCccHHHHHHHHHHHHHhc--CEEEecc
Confidence 56677899999998877 66666666543 3777877
No 83
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=24.79 E-value=1.2e+02 Score=19.84 Aligned_cols=43 Identities=7% Similarity=0.037 Sum_probs=27.0
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL 70 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l 70 (75)
.++|.||...-=...++.|.+. +.+|++.+-+--..++..+++
T Consensus 28 ~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l 70 (271)
T 4ibo_A 28 TALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSRVAQTVQEF 70 (271)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH
Confidence 5778998888666667777764 568887664433333334433
No 84
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=24.68 E-value=1.4e+02 Score=19.10 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=22.4
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.++|.||...-=...++.|.+. +.+|++.+-+
T Consensus 14 ~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~ 45 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYARY--GATVILLGRN 45 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred EEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCC
Confidence 5778999887666666677664 5678776543
No 85
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=24.53 E-value=1.2e+02 Score=20.89 Aligned_cols=44 Identities=11% Similarity=0.170 Sum_probs=29.3
Q ss_pred eEEEEEECCCC-HHHHHHHHHHHhhcCCceEEEecccc---cChHHHHHHHhc
Q psy8628 24 RLIVFIIGGVS-FSEIRCAYEVTNNVKNWEVIIGSSHI---MTPEDFLNNLSN 72 (75)
Q Consensus 24 ~iiVFvvGGiT-y~E~~~i~~l~~~~~~~~iiiGst~i---l~~~~fl~~l~~ 72 (75)
.+.|+..||++ .+.++.+.+. +.+-++-|+.| -+|...+.+|..
T Consensus 213 ~~pvVaegGI~t~edv~~l~~~-----GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 213 SVIRIAESGVRGTADLLAYAGA-----GADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp TSEEEEESCCCSHHHHHHHHHT-----TCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred cCEEEEECCCCCHHHHHHHHHc-----CCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 56788899998 7777766432 34445555556 577777777754
No 86
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=24.25 E-value=1.4e+02 Score=18.85 Aligned_cols=31 Identities=26% Similarity=0.116 Sum_probs=22.5
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst 58 (75)
.|+|.||..+-=...++.|.+. +.+|++.+-
T Consensus 16 ~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r 46 (249)
T 3f9i_A 16 TSLITGASSGIGSAIARLLHKL--GSKVIISGS 46 (249)
T ss_dssp EEEETTTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred EEEEECCCChHHHHHHHHHHHC--CCEEEEEcC
Confidence 4778999988766666777764 567877654
No 87
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=24.09 E-value=1.2e+02 Score=18.09 Aligned_cols=18 Identities=6% Similarity=0.351 Sum_probs=13.2
Q ss_pred eEEEEEECCCCHHHHHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCA 41 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i 41 (75)
+-+|||.||+--.=+.++
T Consensus 18 ~~~vlIagG~GItP~~s~ 35 (186)
T 3a1f_A 18 EVVMLVGAGIGVTPFASI 35 (186)
T ss_dssp SEEEEEEEGGGHHHHHHH
T ss_pred CeEEEEecCccHHHHHHH
Confidence 458999998777666554
No 88
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.00 E-value=66 Score=21.63 Aligned_cols=26 Identities=15% Similarity=0.226 Sum_probs=16.1
Q ss_pred CHHHHHHHHHHHhhcCCceEEEecccc
Q psy8628 34 SFSEIRCAYEVTNNVKNWEVIIGSSHI 60 (75)
Q Consensus 34 Ty~E~~~i~~l~~~~~~~~iiiGst~i 60 (75)
+.+|+..+.+-.++ .+.+++||+...
T Consensus 139 ~~ee~~~~i~~l~~-~G~~vVVG~~~~ 164 (225)
T 2pju_A 139 TEEDARGQINELKA-NGTEAVVGAGLI 164 (225)
T ss_dssp SHHHHHHHHHHHHH-TTCCEEEESHHH
T ss_pred CHHHHHHHHHHHHH-CCCCEEECCHHH
Confidence 35565554443333 379999998654
No 89
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=23.90 E-value=56 Score=22.84 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=21.8
Q ss_pred EEEEECCCCHHHHH-HHHHHHhhcCCceEEEecccc-------cChHHHH
Q psy8628 26 IVFIIGGVSFSEIR-CAYEVTNNVKNWEVIIGSSHI-------MTPEDFL 67 (75)
Q Consensus 26 iVFvvGGiTy~E~~-~i~~l~~~~~~~~iiiGst~i-------l~~~~fl 67 (75)
.|++.||++-+|.. .+++..+ . +.+.++-|-.| -+|..++
T Consensus 224 ~Vv~aGG~~~~~~~~~~~~a~~-a-Ga~Gv~vGRaI~q~~~~~~dp~~~~ 271 (304)
T 1to3_A 224 WVILSSGVDEKLFPRAVRVAME-A-GASGFLAGRAVWSSVIGLPDTELML 271 (304)
T ss_dssp EEECCTTSCTTTHHHHHHHHHH-T-TCCEEEESHHHHGGGTTCSCHHHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHH-c-CCeEEEEehHHhCccccCCCHHHHH
Confidence 58899999865532 3333333 3 33444444444 3455666
No 90
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=23.85 E-value=1.6e+02 Score=19.35 Aligned_cols=43 Identities=12% Similarity=0.116 Sum_probs=28.8
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL 70 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l 70 (75)
.++|.||...-=...++.|.+. +.+|++.+-+--..++..+++
T Consensus 34 ~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~ 76 (276)
T 3r1i_A 34 RALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEI 76 (276)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH
Confidence 5788999988766777777764 578887765444444444444
No 91
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.84 E-value=1.5e+02 Score=19.12 Aligned_cols=32 Identities=13% Similarity=0.140 Sum_probs=20.8
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.++|.||...-=...++.|.+. +.+|++.+-+
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~ 44 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQ--GADLVLAART 44 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHT--TCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCC
Confidence 4678888776555556666654 5677776543
No 92
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=23.41 E-value=1.9e+02 Score=21.70 Aligned_cols=49 Identities=12% Similarity=0.177 Sum_probs=31.6
Q ss_pred EEEEECC-CCHHHHHHHHHHHhh-cCCceEEEecccccCh---------HHHHHHHhcCC
Q psy8628 26 IVFIIGG-VSFSEIRCAYEVTNN-VKNWEVIIGSSHIMTP---------EDFLNNLSNLS 74 (75)
Q Consensus 26 iVFvvGG-iTy~E~~~i~~l~~~-~~~~~iiiGst~il~~---------~~fl~~l~~l~ 74 (75)
+||+-+| -+.+|++.+.+--.. .|..-+..+.+-.+|. ..|.++|.+|+
T Consensus 282 ~if~e~~~~~~eei~~f~~~v~~~~P~~~La~n~sPsf~w~~~~~~~~~~~f~~eL~~lG 341 (429)
T 1f8m_A 282 LIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAAMG 341 (429)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCTTSCHHHHCCHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCCCHHHHHHHHHHhcccCCCceeecCCCCCCCcccccchhhHhHHHHHHHHcC
Confidence 5788766 499999888764432 4543444556656662 56777887664
No 93
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=23.08 E-value=1.5e+02 Score=18.63 Aligned_cols=31 Identities=13% Similarity=0.066 Sum_probs=21.1
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst 58 (75)
.|+|.||..+-=...++.|.+. +.+|++.+-
T Consensus 13 ~vlVtGasggiG~~la~~l~~~--G~~V~~~~r 43 (255)
T 1fmc_A 13 CAIITGAGAGIGKEIAITFATA--GASVVVSDI 43 (255)
T ss_dssp EEEETTTTSHHHHHHHHHHHTT--TCEEEEEES
T ss_pred EEEEECCccHHHHHHHHHHHHC--CCEEEEEcC
Confidence 4678898888766666777654 567776543
No 94
>1j34_C Coagulation factor IX; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Bos taurus} SCOP: g.32.1.1 PDB: 1j35_C* 1cfh_A 1cfi_A* 1mgx_A 1iod_G*
Probab=23.03 E-value=33 Score=18.25 Aligned_cols=12 Identities=42% Similarity=0.570 Sum_probs=9.8
Q ss_pred CCHHHHHHHHHH
Q psy8628 33 VSFSEIRCAYEV 44 (75)
Q Consensus 33 iTy~E~~~i~~l 44 (75)
++|+|+|.+.+-
T Consensus 23 Cs~EEArEvFe~ 34 (46)
T 1j34_C 23 CSFEEAREVFEN 34 (46)
T ss_dssp CCHHHHHHHHCC
T ss_pred CCHHHHHHHhcC
Confidence 789999998653
No 95
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=22.97 E-value=1.6e+02 Score=19.88 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=22.3
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.|+|.||.++-=...+..|.+. +.+|++.+-+
T Consensus 10 ~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~ 41 (319)
T 3ioy_A 10 TAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIR 41 (319)
T ss_dssp EEEEETTTSTHHHHHHHHHHHT--TCEEEEEESC
T ss_pred EEEEcCCchHHHHHHHHHHHHC--CCEEEEEECC
Confidence 5788998887666666677664 5677776544
No 96
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=22.77 E-value=1.7e+02 Score=19.13 Aligned_cols=30 Identities=17% Similarity=0.021 Sum_probs=21.4
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEec
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGs 57 (75)
.|+|.||..+-=...+..|.+. +.+|++.+
T Consensus 46 ~vlITGasggIG~~la~~L~~~--G~~V~~~~ 75 (285)
T 2c07_A 46 VALVTGAGRGIGREIAKMLAKS--VSHVICIS 75 (285)
T ss_dssp EEEEESTTSHHHHHHHHHHTTT--SSEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHc--CCEEEEEc
Confidence 5788999888766666777654 56777754
No 97
>1lbj_A Motilin; A-helix, B-turn of type I, hormone/growth factor complex; NMR {Synthetic} SCOP: j.6.1.1
Probab=22.73 E-value=72 Score=14.92 Aligned_cols=15 Identities=20% Similarity=0.364 Sum_probs=11.8
Q ss_pred CCHHHHHHHHHHHhh
Q psy8628 33 VSFSEIRCAYEVTNN 47 (75)
Q Consensus 33 iTy~E~~~i~~l~~~ 47 (75)
-||+|++.++|-.+.
T Consensus 5 Ft~selqr~qEkErN 19 (26)
T 1lbj_A 5 FTYGELQRMQEKERN 19 (26)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHhc
Confidence 489999998886653
No 98
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=22.68 E-value=58 Score=24.47 Aligned_cols=37 Identities=27% Similarity=0.469 Sum_probs=24.8
Q ss_pred CCCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEecc
Q psy8628 20 KNVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 20 ~~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGst 58 (75)
.+|++=+++|+||.-.+. +..+..|.++- -.++|||-
T Consensus 199 ~~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGGg 236 (415)
T 1qpg_A 199 ENPTRPFLAILGGAKVADKIQLIDNLLDKV--DSIIIGGG 236 (415)
T ss_dssp SSCCSSEEEEECSSCSGGGHHHHHHHTTTC--SEEEECGG
T ss_pred cCCCCCeEEEEcCcchhhHHHHHHHHHHhc--CEEEeChH
Confidence 355666889999988876 66666665543 26677663
No 99
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=22.62 E-value=62 Score=24.32 Aligned_cols=36 Identities=28% Similarity=0.482 Sum_probs=24.8
Q ss_pred CCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEecc
Q psy8628 21 NVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGst 58 (75)
+|++=+++|+||.-.+. +..+..|.++- -.++|||-
T Consensus 202 ~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGGg 238 (416)
T 2wzb_A 202 SPERPFLAILGGAKVADKIQLINNMLDKV--NEMIIGGG 238 (416)
T ss_dssp SCCSSEEEEECSSCHHHHGGGHHHHTTTC--SEEEECGG
T ss_pred CCCCCeEEEEcCcchhhHHHHHHHHHHhc--CeeeeChH
Confidence 55667899999999987 55555555543 26777763
No 100
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.54 E-value=1.6e+02 Score=18.77 Aligned_cols=32 Identities=19% Similarity=0.103 Sum_probs=22.9
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.|+|.||.+.-=...++.|.++ +.+|++.+-+
T Consensus 11 ~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~ 42 (261)
T 3n74_A 11 VALITGAGSGFGEGMAKRFAKG--GAKVVIVDRD 42 (261)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred EEEEECCCchHHHHHHHHHHHC--CCEEEEEcCC
Confidence 5778999888666677777764 5677776543
No 101
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=22.26 E-value=1.6e+02 Score=18.91 Aligned_cols=43 Identities=14% Similarity=0.222 Sum_probs=28.3
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL 70 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l 70 (75)
.++|.||.+.-=...++.|.+. +.+|++.+-+--..++..+++
T Consensus 9 ~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~ 51 (252)
T 3h7a_A 9 TVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEI 51 (252)
T ss_dssp EEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH
Confidence 4778898887666666677664 568887765544444555544
No 102
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=22.05 E-value=1.7e+02 Score=18.89 Aligned_cols=32 Identities=9% Similarity=0.076 Sum_probs=21.6
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.++|.||...-=...++.|.+. +.+|++.+-+
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~ 45 (256)
T 3gaf_A 14 VAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLK 45 (256)
T ss_dssp EEEECSCSSHHHHHHHHHHHHH--TCEEEEEESS
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 5778898887666666667665 5677766543
No 103
>2wu8_A Glucose-6-phosphate isomerase; gluconeogenesis, 5-phosphoarabinonate (PAB), PGI, cytoplasm, glycolysis; 2.25A {Mycobacterium tuberculosis}
Probab=22.01 E-value=1.6e+02 Score=22.74 Aligned_cols=45 Identities=24% Similarity=0.299 Sum_probs=31.1
Q ss_pred EEEEC-CCCHHHHHHHHHHHhhc--CCceEEEecccccChHHHHHHHhcC
Q psy8628 27 VFIIG-GVSFSEIRCAYEVTNNV--KNWEVIIGSSHIMTPEDFLNNLSNL 73 (75)
Q Consensus 27 VFvvG-GiTy~E~~~i~~l~~~~--~~~~iiiGst~il~~~~fl~~l~~l 73 (75)
|+++| |.||--.+.+++.-+.+ ++.++.+- ++ +.|.++.+.+..+
T Consensus 146 VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fv-sN-vDp~~~~~~l~~l 193 (549)
T 2wu8_A 146 VVNIGIGGSDLGPVMVYQALRHYADAGISARFV-SN-VDPADLIATLADL 193 (549)
T ss_dssp EEEECCGGGTHHHHHHHHHTGGGCCSSCEEEEE-CC-SSHHHHHHHHTTC
T ss_pred EEEEeccchHHHHHHHHHHHHhhccCCCeEEEE-cc-CCHHHHHHHHhcC
Confidence 44555 77888888888866543 24677777 33 4788888877665
No 104
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=21.90 E-value=1.7e+02 Score=18.85 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=25.5
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHH
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLN 68 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~ 68 (75)
.++|.||.+.-=...++.|.+. +.+|++.+-+--..++..+
T Consensus 9 ~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~ 49 (250)
T 3nyw_A 9 LAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHD 49 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH
Confidence 5778898887666666677665 5677776544333333333
No 105
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=21.67 E-value=14 Score=24.94 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHHHHhhcC--CceEEEecccccChHH
Q psy8628 32 GVSFSEIRCAYEVTNNVK--NWEVIIGSSHIMTPED 65 (75)
Q Consensus 32 GiTy~E~~~i~~l~~~~~--~~~iiiGst~il~~~~ 65 (75)
++-|.....+-+++..++ ..-++||..+++||.-
T Consensus 80 ~VPYd~v~EMdeIN~df~~tDv~lVIGANDvvNpaA 115 (180)
T 1pno_A 80 NVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAA 115 (180)
T ss_dssp TCCGGGEEEHHHHGGGGGGCSEEEEESCCGGGCGGG
T ss_pred CCCHHHHhhHHHHhhhhhhcCEEEEeccccccCchh
Confidence 677887777777777654 4566799999999963
No 106
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=21.52 E-value=1.2e+02 Score=22.94 Aligned_cols=37 Identities=22% Similarity=0.315 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHh
Q psy8628 34 SFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLS 71 (75)
Q Consensus 34 Ty~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~ 71 (75)
|..|...+..+++.. ++.+++|..+=-|...|+.+|.
T Consensus 361 gITEalka~~lA~~~-G~~vmvshrSGETeD~~iAdLa 397 (452)
T 3otr_A 361 SVTEAIEACLLAQKS-GWGVQVSHRSGETEDSFIADLV 397 (452)
T ss_dssp CHHHHHHHHHHHHHT-TCEEEEECCSSCCSCCHHHHHH
T ss_pred cHHHHHHHHHHHHHc-CCeEEEeCCCCCCchhHHHHHH
Confidence 346788888899887 7999999887778888887763
No 107
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=21.48 E-value=72 Score=21.42 Aligned_cols=18 Identities=28% Similarity=0.562 Sum_probs=15.2
Q ss_pred cccccChHHHHHHHhcCC
Q psy8628 57 SSHIMTPEDFLNNLSNLS 74 (75)
Q Consensus 57 st~il~~~~fl~~l~~l~ 74 (75)
|+..++|++|++.+..|.
T Consensus 110 G~~lVSp~Dl~~A~~~l~ 127 (218)
T 3cuq_B 110 GMELLSPEDLVNACKMLE 127 (218)
T ss_dssp SSSCCCHHHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 468999999999988764
No 108
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=21.47 E-value=1.8e+02 Score=18.99 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=23.6
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHI 60 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~i 60 (75)
.++|.||...-=...++.|.+. +.+|++.+-+-
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~ 61 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSL 61 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCH
T ss_pred EEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 5788999887666666777664 56888776543
No 109
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=21.46 E-value=1.2e+02 Score=22.80 Aligned_cols=37 Identities=16% Similarity=0.333 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHHh
Q psy8628 34 SFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNLS 71 (75)
Q Consensus 34 Ty~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l~ 71 (75)
|..|...+..+++.. ++.+++|..+--|...|+.+|.
T Consensus 358 GITEalkaa~lA~~~-G~~vmvsHrsgETeDt~iAdLA 394 (441)
T 3qtp_A 358 TLTETFKTIKMAQEK-GWGVMASHRSGETEDTFIADLV 394 (441)
T ss_dssp CHHHHHHHHHHHHHT-TCEEEEECCSSCCSCCHHHHHH
T ss_pred cHHHHHHHHHHHHHc-CCeEEEeCCCCCccHhHHHHHH
Confidence 447888888999887 7999999887778777877663
No 110
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=21.33 E-value=1.8e+02 Score=19.12 Aligned_cols=43 Identities=14% Similarity=0.061 Sum_probs=26.9
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccChHHHHHHH
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDFLNNL 70 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~~~fl~~l 70 (75)
+++|.||...-=...++.|.+. +.+|++.+-+--..++..+++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l 72 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEI 72 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH
Confidence 5788999887666666777764 567877654433333333333
No 111
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=21.30 E-value=1.5e+02 Score=18.69 Aligned_cols=31 Identities=10% Similarity=0.020 Sum_probs=22.0
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst 58 (75)
.|+|.||..+-=...++.|.+. +.+|++.+-
T Consensus 9 ~vlITGasggiG~~la~~l~~~--G~~V~~~~r 39 (264)
T 2pd6_A 9 LALVTGAGSGIGRAVSVRLAGE--GATVAACDL 39 (264)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred EEEEECCCChHHHHHHHHHHHC--CCEEEEEeC
Confidence 4778999888766666777664 567777653
No 112
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=21.27 E-value=45 Score=23.24 Aligned_cols=39 Identities=8% Similarity=0.088 Sum_probs=25.2
Q ss_pred CeEEEEEECCC-CHHHHHHHHHHHhhcCCceEEEecccccChHHH
Q psy8628 23 PRLIVFIIGGV-SFSEIRCAYEVTNNVKNWEVIIGSSHIMTPEDF 66 (75)
Q Consensus 23 ~~iiVFvvGGi-Ty~E~~~i~~l~~~~~~~~iiiGst~il~~~~f 66 (75)
+.++|.--||+ |.++++.+.+ . +.+-++-|+.|..+.+-
T Consensus 219 ~~~~vIaesGI~t~edv~~l~~----~-Ga~gvLVG~almr~~d~ 258 (272)
T 3tsm_A 219 SDRLLVGESGIFTHEDCLRLEK----S-GIGTFLIGESLMRQHDV 258 (272)
T ss_dssp TTSEEEEESSCCSHHHHHHHHT----T-TCCEEEECHHHHTSSCH
T ss_pred CCCcEEEECCCCCHHHHHHHHH----c-CCCEEEEcHHHcCCcCH
Confidence 45677788999 8888877743 2 44555555666655443
No 113
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=21.16 E-value=63 Score=24.29 Aligned_cols=35 Identities=29% Similarity=0.481 Sum_probs=23.6
Q ss_pred CCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 21 NVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
+|++=+++|+||.-.+. +..+..|.++- -.++|||
T Consensus 130 ~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGG 165 (416)
T 1fw8_A 130 NPTRPFLAILGGAKVADKIQLIDNLLDKV--DSIIIGG 165 (416)
T ss_dssp SCCSSEEEEEECSCSTTTHHHHHHHHTTC--SEEEEEG
T ss_pred CCCCCeEEEEcCcchhhHHHHHHHHHHhh--CeeEeCh
Confidence 45666888888888876 66666666543 2667665
No 114
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=20.98 E-value=1.8e+02 Score=18.83 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=21.4
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst 58 (75)
.|+|.||..+-=...+..|.+. +.+|++.+-
T Consensus 33 ~vlITGasggIG~~la~~L~~~--G~~V~~~~r 63 (272)
T 1yb1_A 33 IVLITGAGHGIGRLTAYEFAKL--KSKLVLWDI 63 (272)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred EEEEECCCchHHHHHHHHHHHC--CCEEEEEEc
Confidence 4778999888666666667664 567776543
No 115
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=20.96 E-value=77 Score=19.46 Aligned_cols=20 Identities=15% Similarity=-0.051 Sum_probs=15.6
Q ss_pred eEEEEEECCCCHHHHHHHHH
Q psy8628 24 RLIVFIIGGVSFSEIRCAYE 43 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~ 43 (75)
+=++||.||+-..=+.++.+
T Consensus 24 ~~~llIaGG~GItPl~sm~~ 43 (158)
T 3lrx_A 24 GKILAIGAYTGIVEVYPIAK 43 (158)
T ss_dssp SEEEEEEETTHHHHHHHHHH
T ss_pred CeEEEEEccCcHHHHHHHHH
Confidence 44789999999888777654
No 116
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=20.86 E-value=85 Score=18.57 Aligned_cols=47 Identities=11% Similarity=-0.049 Sum_probs=23.8
Q ss_pred CCCe-EEEEEE-C-CCC--HHHHHHHHHHHhhcCC--ceEEEecccccChHHHHHH
Q psy8628 21 NVPR-LIVFII-G-GVS--FSEIRCAYEVTNNVKN--WEVIIGSSHIMTPEDFLNN 69 (75)
Q Consensus 21 ~~~~-iiVFvv-G-GiT--y~E~~~i~~l~~~~~~--~~iiiGst~il~~~~fl~~ 69 (75)
.++. ++|+|. + .+. -.|+..+.++.++++. .+|+.-+ .-+++..-+.
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs--~d~~~~~~~~ 80 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVS--SDDINSHKRF 80 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEE--SCCHHHHHHH
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEe--CCCHHHHHHH
Confidence 3444 565555 3 332 3566677777666533 4444433 3355544433
No 117
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=20.85 E-value=1.9e+02 Score=19.01 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=19.1
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.++|.||...-=...++.|.+. +.+|++.+-+
T Consensus 6 ~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~ 37 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVA--GAKILLGARR 37 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred EEEEeCCccHHHHHHHHHHHHC--CCEEEEEECC
Confidence 4667777776555555556553 4566665543
No 118
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=20.82 E-value=1.8e+02 Score=18.79 Aligned_cols=31 Identities=13% Similarity=0.100 Sum_probs=20.4
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSS 58 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst 58 (75)
+++|.||.+.-=...++.|.+. +.+|++.+-
T Consensus 10 ~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r 40 (265)
T 3lf2_A 10 VAVVTGGSSGIGLATVELLLEA--GAAVAFCAR 40 (265)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred EEEEeCCCChHHHHHHHHHHHC--CCEEEEEeC
Confidence 5677888877655566666654 567776654
No 119
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=20.74 E-value=1.7e+02 Score=19.41 Aligned_cols=35 Identities=11% Similarity=0.154 Sum_probs=21.5
Q ss_pred EEEEEECCC-CH----HH-HHHHHHHHhhcCCceEEEeccc
Q psy8628 25 LIVFIIGGV-SF----SE-IRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 25 iiVFvvGGi-Ty----~E-~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.+|.++|.. .. .+ +.++..+.++.++.+++|.|..
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~ 249 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRG 249 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCS
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 466778888 43 33 4455555555567787777664
No 120
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=20.70 E-value=1.6e+02 Score=19.01 Aligned_cols=32 Identities=13% Similarity=0.134 Sum_probs=21.5
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEeccc
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSH 59 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~ 59 (75)
.++|.||...-=...++.|.+. +.+|++.+-+
T Consensus 12 ~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~ 43 (267)
T 3t4x_A 12 TALVTGSTAGIGKAIATSLVAE--GANVLINGRR 43 (267)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred EEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 4678888887666666666664 5677776543
No 121
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=20.53 E-value=1.9e+02 Score=19.06 Aligned_cols=31 Identities=13% Similarity=0.185 Sum_probs=21.8
Q ss_pred eEEEEEECCCCHHHHHHHHHHHhhcCCceEEEe
Q psy8628 24 RLIVFIIGGVSFSEIRCAYEVTNNVKNWEVIIG 56 (75)
Q Consensus 24 ~iiVFvvGGiTy~E~~~i~~l~~~~~~~~iiiG 56 (75)
.-.|+|.||..|-=...++.|.+. +.+|++-
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~ 50 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQ--GHEILVI 50 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGG--TCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE
Confidence 345889999999777777777664 4566553
No 122
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=20.28 E-value=58 Score=24.24 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=23.3
Q ss_pred CCCeEEEEEECCCCHHH-HHHHHHHHhhcCCceEEEec
Q psy8628 21 NVPRLIVFIIGGVSFSE-IRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E-~~~i~~l~~~~~~~~iiiGs 57 (75)
+|++=+++|+||.-.+. +..+..|.++- -.++|||
T Consensus 180 ~p~rP~vaIlGGaKVsdKi~vi~nLl~kv--D~liiGG 215 (387)
T 1zmr_A 180 EPARPMVAIVGGSKVSTKLTVLDSLSKIA--DQLIVGG 215 (387)
T ss_dssp SCSSSEEEEEEESCTTTTHHHHHHHHTTC--SEEEEEE
T ss_pred CCCCCeEEEEcCcchhhHHHHHHHHHHhc--CEEEeCc
Confidence 55666888888888866 66666665543 2566665
No 123
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=20.25 E-value=41 Score=23.28 Aligned_cols=25 Identities=16% Similarity=0.464 Sum_probs=20.5
Q ss_pred ECCCCHHHHHHHHHHHhhcCCceEEEec
Q psy8628 30 IGGVSFSEIRCAYEVTNNVKNWEVIIGS 57 (75)
Q Consensus 30 vGGiTy~E~~~i~~l~~~~~~~~iiiGs 57 (75)
+||+| |.+.+..+++.. +.++.+|+
T Consensus 252 ~GGit--~~~~i~~~A~~~-gi~~~~~~ 276 (329)
T 4gfi_A 252 TGGLT--EALVMKAEAERL-GFTIMVGC 276 (329)
T ss_dssp HTSHH--HHHHHHHHHHHT-TCEEEECC
T ss_pred eCCHH--HHHHHHHHHHHC-CCEEEECC
Confidence 47765 788889999887 78999986
No 124
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=20.05 E-value=2.1e+02 Score=20.67 Aligned_cols=38 Identities=13% Similarity=0.249 Sum_probs=25.2
Q ss_pred EEEEECCCCHHHHHHHHHHHhhcCCceEEEecccccCh
Q psy8628 26 IVFIIGGVSFSEIRCAYEVTNNVKNWEVIIGSSHIMTP 63 (75)
Q Consensus 26 iVFvvGGiTy~E~~~i~~l~~~~~~~~iiiGst~il~~ 63 (75)
+++||||-.=+--+.|++++++....-..|-+-.=+.+
T Consensus 228 ~miVVGg~nSSNT~rL~eia~~~g~~ty~Ie~~~el~~ 265 (328)
T 3szu_A 228 VVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQE 265 (328)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHTTCEEEEESSGGGCCH
T ss_pred EEEEeCCCCCchHHHHHHHHHHhCCCEEEeCChHHCCH
Confidence 56779999989999999999876322334444333333
No 125
>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...
Probab=20.02 E-value=2.4e+02 Score=21.17 Aligned_cols=26 Identities=27% Similarity=0.324 Sum_probs=19.2
Q ss_pred CCCeEEEEEECCCCHHHHHHHHHHHh
Q psy8628 21 NVPRLIVFIIGGVSFSEIRCAYEVTN 46 (75)
Q Consensus 21 ~~~~iiVFvvGGiTy~E~~~i~~l~~ 46 (75)
+.+.||+||==|.+.+.+.+.+.+..
T Consensus 41 ~aKNVIlfIGDGMg~~~vtaaR~y~~ 66 (449)
T 3tg0_A 41 PAKNIILLIGDGMGDSEITAARNYAE 66 (449)
T ss_dssp CCSEEEEEEETTCCHHHHHHHHHHHT
T ss_pred CCCeEEEEEeCCCCHHHHHHHHHHhh
Confidence 44566655555999999999887763
Done!