Query psy8629
Match_columns 483
No_of_seqs 287 out of 2003
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 23:39:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8629.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8629hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q55_A EP-cadherin, C-cadherin 100.0 2.8E-71 9.5E-76 611.8 38.2 452 2-482 10-628 (880)
2 3q2v_A Cadherin-1; cell adhesi 100.0 1.8E-69 6.1E-74 572.3 46.7 407 21-478 6-467 (550)
3 1l3w_A EP-cadherin, C-cadherin 100.0 1.4E-69 4.8E-74 572.2 42.6 413 19-482 10-479 (546)
4 3q2w_A Cadherin-2; cell adhesi 100.0 3.6E-68 1.2E-72 563.4 47.7 412 21-482 6-480 (559)
5 3q2w_A Cadherin-2; cell adhesi 100.0 7.7E-61 2.6E-65 507.2 37.2 399 12-449 105-553 (559)
6 3q2v_A Cadherin-1; cell adhesi 100.0 4.3E-59 1.5E-63 492.9 40.1 390 12-450 105-544 (550)
7 3ubh_A Neural-cadherin; cell a 100.0 7.7E-58 2.6E-62 468.0 43.5 357 31-439 8-418 (419)
8 1l3w_A EP-cadherin, C-cadherin 100.0 1.6E-59 5.3E-64 495.6 30.9 386 12-447 111-545 (546)
9 1q55_A EP-cadherin, C-cadherin 100.0 1.9E-57 6.4E-62 501.7 32.2 389 12-450 260-697 (880)
10 2a62_A Cadherin-8; extracellul 100.0 1E-51 3.5E-56 406.9 26.7 297 20-438 5-322 (322)
11 3ubh_A Neural-cadherin; cell a 100.0 1.9E-49 6.6E-54 405.8 38.0 302 168-482 9-362 (419)
12 3ubf_A Neural-cadherin; cell a 100.0 3.3E-49 1.1E-53 389.4 36.7 297 17-444 6-316 (316)
13 2a62_A Cadherin-8; extracellul 100.0 1.6E-42 5.5E-47 341.4 20.3 236 157-482 6-252 (322)
14 3mvs_A Cadherin-23, otocadheri 100.0 2.3E-39 7.8E-44 300.1 24.4 205 146-444 3-210 (210)
15 2x2u_A Proto-oncogene tyrosine 100.0 1.9E-40 6.5E-45 314.4 15.4 214 14-264 2-245 (246)
16 2a4e_A Cadherin-11; dimer, cal 100.0 1.3E-38 4.5E-43 295.3 27.5 201 156-446 6-215 (215)
17 2x2u_A Proto-oncogene tyrosine 100.0 1.4E-40 4.8E-45 315.2 11.4 211 150-448 2-245 (246)
18 3mvs_A Cadherin-23, otocadheri 100.0 1.9E-38 6.4E-43 294.0 21.8 203 12-260 5-210 (210)
19 3ubf_A Neural-cadherin; cell a 100.0 6.2E-38 2.1E-42 308.8 24.9 228 168-482 4-248 (316)
20 2a4e_A Cadherin-11; dimer, cal 100.0 8.3E-37 2.9E-41 283.2 25.9 200 20-262 6-215 (215)
21 2qvi_A Cadherin-2; beta barrel 100.0 1.6E-35 5.3E-40 275.0 21.6 200 157-439 6-215 (215)
22 3qrb_A Cadherin-1; cell adhesi 100.0 9.5E-35 3.2E-39 269.8 25.5 198 157-439 6-213 (213)
23 3ppe_A Vascular endothelial ca 100.0 3.2E-34 1.1E-38 263.9 26.4 191 156-439 5-203 (203)
24 3qrb_A Cadherin-1; cell adhesi 100.0 1.5E-34 5E-39 268.5 23.7 196 21-255 6-213 (213)
25 3k5r_A Cadherin 13; mouse, str 100.0 6.8E-34 2.3E-38 265.0 25.8 196 21-255 7-218 (218)
26 3k5r_A Cadherin 13; mouse, str 100.0 4.7E-34 1.6E-38 266.0 23.2 197 157-439 7-218 (218)
27 3lnd_A CDH6 protein, cadherin 100.0 5.7E-35 2E-39 269.9 16.2 193 157-439 6-207 (207)
28 2qvi_A Cadherin-2; beta barrel 100.0 4.2E-34 1.4E-38 265.4 19.8 196 21-255 6-215 (215)
29 3ppe_A Vascular endothelial ca 100.0 3.2E-33 1.1E-37 257.2 25.5 191 21-255 6-203 (203)
30 3lnd_A CDH6 protein, cadherin 100.0 1.9E-33 6.5E-38 259.7 19.4 192 21-255 6-207 (207)
31 4apx_B Protocadherin-15, otoca 100.0 7.5E-30 2.6E-34 240.2 20.0 206 154-439 20-237 (242)
32 4apx_B Protocadherin-15, otoca 100.0 1E-28 3.5E-33 232.4 24.1 196 18-255 20-237 (242)
33 2yst_A Protocadherin-7; BH-PCD 99.9 3.3E-27 1.1E-31 198.0 9.4 116 139-261 2-119 (119)
34 2yst_A Protocadherin-7; BH-PCD 99.9 3E-26 1E-30 192.2 8.2 118 251-445 2-119 (119)
35 2ee0_A Protocadherin-9; Ca dom 99.9 9.1E-25 3.1E-29 181.4 8.9 110 139-257 2-114 (114)
36 2ee0_A Protocadherin-9; Ca dom 99.9 1.8E-23 6.3E-28 173.5 8.4 113 251-441 2-114 (114)
37 2yqg_A Desmoglein-2, HDGC; cad 99.9 5.2E-22 1.8E-26 166.9 7.1 114 144-265 5-122 (123)
38 2yqg_A Desmoglein-2, HDGC; cad 99.8 2.3E-21 7.7E-26 163.0 6.1 118 257-450 6-123 (123)
39 1ncg_A N-cadherin; cell adhesi 99.8 2.2E-20 7.5E-25 153.8 8.8 97 348-447 10-110 (110)
40 1ncg_A N-cadherin; cell adhesi 99.8 1.2E-19 4.2E-24 149.3 9.0 99 155-263 6-110 (110)
41 1wyj_A Protocadherin beta 14; 99.8 5E-20 1.7E-24 154.9 2.8 110 12-159 5-123 (125)
42 1zvn_A Mn-cadherin; strand dim 99.7 1.4E-17 4.9E-22 133.7 10.9 88 348-439 9-99 (99)
43 1zxk_A Cadherin-8; strand dime 99.7 1.5E-17 5.1E-22 133.4 10.4 88 348-439 8-98 (98)
44 1wyj_A Protocadherin beta 14; 99.7 7.6E-19 2.6E-23 147.7 2.8 101 348-455 16-123 (125)
45 1zvn_A Mn-cadherin; strand dim 99.7 6.3E-17 2.2E-21 130.0 11.8 91 156-255 6-99 (99)
46 3k6d_A T-cadherin; cell adhesi 99.7 5E-17 1.7E-21 130.8 10.3 88 348-439 8-99 (99)
47 1zxk_A Cadherin-8; strand dime 99.7 9.2E-17 3.1E-21 128.8 11.1 91 156-255 5-98 (98)
48 3k6f_A T-cadherin; cell adhesi 99.7 1.1E-16 3.8E-21 129.1 11.3 88 348-439 9-100 (100)
49 3k6i_A T-cadherin; cell adhesi 99.7 1.7E-16 6E-21 127.7 12.2 88 348-439 8-99 (99)
50 2omz_B Epithelial-cadherin; le 99.7 2.2E-16 7.6E-21 128.4 10.1 90 348-440 12-105 (105)
51 3k6d_A T-cadherin; cell adhesi 99.7 6.4E-16 2.2E-20 124.3 11.1 88 157-255 6-99 (99)
52 3k6f_A T-cadherin; cell adhesi 99.6 2.8E-15 9.5E-20 120.8 12.2 88 157-255 7-100 (100)
53 3k6i_A T-cadherin; cell adhesi 99.6 3.8E-15 1.3E-19 119.8 12.9 88 157-255 6-99 (99)
54 2omz_B Epithelial-cadherin; le 99.6 1.8E-15 6E-20 123.1 9.7 90 157-256 10-105 (105)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.5 1.2E-14 4.1E-19 117.7 5.9 64 17-84 2-70 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.3 1.1E-13 3.9E-18 111.9 1.0 90 348-443 8-103 (103)
57 3rb5_A Na/Ca exchange protein; 91.0 7.9 0.00027 36.5 15.9 151 145-304 6-163 (298)
58 2yhg_A SDE_182CT, cellulose-bi 89.2 3.6 0.00012 40.9 12.1 95 143-253 329-436 (437)
59 2yhg_A SDE_182CT, cellulose-bi 87.9 2.1 7.1E-05 42.6 9.4 69 365-437 365-436 (437)
60 3gin_A Sodium/calcium exchange 84.4 12 0.0004 31.8 11.3 58 135-195 10-67 (160)
61 1op4_A Neural-cadherin; beta s 82.4 2.9 9.9E-05 35.4 6.5 61 12-79 33-94 (159)
62 3pdd_A Glycoside hydrolase, fa 79.6 30 0.001 30.0 17.9 146 86-255 19-180 (190)
63 3ead_A Na/Ca exchange protein; 79.1 10 0.00035 31.1 8.8 125 146-276 2-133 (137)
64 2yrl_A KIAA1837 protein; PKD d 74.7 7.2 0.00025 30.2 6.3 32 225-258 67-98 (102)
65 2kpn_A Bacillolysin; solution 74.4 4.6 0.00016 31.5 5.0 45 215-261 47-91 (103)
66 1op4_A Neural-cadherin; beta s 74.3 24 0.00082 29.7 9.8 81 146-240 31-111 (159)
67 3rb5_A Na/Ca exchange protein; 73.3 61 0.0021 30.3 17.3 74 117-194 87-165 (298)
68 2kpn_A Bacillolysin; solution 71.5 8.6 0.0003 29.9 5.9 46 398-445 46-91 (103)
69 2yrl_A KIAA1837 protein; PKD d 70.7 7 0.00024 30.3 5.3 32 409-442 67-98 (102)
70 2y72_A Collagenase, collagenas 61.1 17 0.00056 26.9 5.6 31 406-438 54-84 (85)
71 1u2c_A Dystroglycan; IG-like d 60.6 43 0.0015 30.2 9.0 66 375-442 33-104 (246)
72 2y72_A Collagenase, collagenas 58.2 20 0.00067 26.5 5.6 31 222-254 54-84 (85)
73 3pdd_A Glycoside hydrolase, fa 57.7 34 0.0012 29.7 7.9 60 409-476 59-122 (190)
74 3us9_A Sodium/calcium exchange 57.6 1.2E+02 0.0042 28.2 21.8 141 157-304 18-181 (295)
75 3ead_A Na/Ca exchange protein; 56.9 77 0.0026 25.7 9.6 47 117-164 82-133 (137)
76 3pe9_A Fibronectin(III)-like m 50.3 82 0.0028 24.0 10.1 71 356-439 17-88 (98)
77 3gin_A Sodium/calcium exchange 46.0 1.3E+02 0.0045 25.1 11.2 57 246-305 9-65 (160)
78 3us9_A Sodium/calcium exchange 38.3 2.5E+02 0.0084 26.1 20.9 57 134-194 127-183 (295)
79 3pe9_A Fibronectin(III)-like m 31.4 1.7E+02 0.0058 22.2 8.2 29 226-255 60-88 (98)
No 1
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=2.8e-71 Score=611.85 Aligned_cols=452 Identities=23% Similarity=0.365 Sum_probs=324.9
Q ss_pred hhhHHHHHHH--------------HhhhcCceEEEEEe-CCCCCCeEEEEEEccCCCCC-CCCEEEEecCCCCCcccEEE
Q psy8629 2 RLWRLLWLLA--------------AVAADEHLRDLEIS-EGVPVGTRVGFIGDGFVGDS-GPPYLIVPVPGSAVDTDLSI 65 (483)
Q Consensus 2 ~~~~~~~~~~--------------~~~~~~~~~~~~v~-En~~~gt~V~~v~a~d~d~~-~~~y~i~~~~~~~~~~~F~I 65 (483)
.+|.+++|++ ++.|.+..|.++|+ |++++|+.|++++|+|.|.+ .+.|++.. ..|+|
T Consensus 10 ~~~~~~~~~~~q~~~~~~~d~ndn~P~F~~~~y~~~v~~e~~~~Gt~V~~v~a~D~D~n~~i~Y~~~~-------~~F~I 82 (880)
T 1q55_A 10 SVWLCGLLCLLQVVPSINADVSGCKPGFSSAEYIFSVNRRELERGRKLGKVNFSDCTTRKHGLYDVGD-------SRFRV 82 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHhhheeeecccccCCCCccCCCeEEEEechhhCCCCCEEEEEEEEeCCCCceEEEEeCC-------CCEEE
Confidence 4788876553 45799999999999 99999999999999998844 46888742 28999
Q ss_pred eCCccEEEeCccCCccCCceeeEEEEecCCcc-----------ee-----------------------------------
Q psy8629 66 EQNTGEIRTKVPLDRETRSSYSLVAIPLSGEN-----------VR----------------------------------- 99 (483)
Q Consensus 66 d~~tG~i~~~~~LD~E~~~~y~l~v~a~d~~~-----------~~----------------------------------- 99 (483)
++ +|.|+++++||||.. |.|.|.|.|++. +.
T Consensus 83 d~-~G~i~~~~~Ld~e~~--~~l~V~A~D~~~~~~~~~v~v~~v~~~~~~~~~~~~~~~~~p~f~~~~~~~~r~~r~~~~ 159 (880)
T 1q55_A 83 LP-DGTVLVKRHVKLHKD--TKFTISTWDARGIKHSTNIAVASKRHRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVI 159 (880)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred CC-CceEEECCccccccc--eEEEEEEEcCCCCeEEEEEEEEEecccccccccccccccCcccccccccccceeeccccc
Confidence 98 799999999999987 777777766421 00
Q ss_pred ----------------E-----------------------------EEee-cCcEEEEcccCCccccceEEEEEEeCCCC
Q psy8629 100 ----------------V-----------------------------VSFY-EPGEIRTKVPLDRETRSSYSLVAIPLSGE 133 (483)
Q Consensus 100 ----------------~-----------------------------~~~~-~~g~l~~~~~ld~e~~~~~~~~~~~~~~~ 133 (483)
+ |.+. ++|.|+++++||||.+..|.|.+.+.|++
T Consensus 160 ~~~~v~En~~~~~~~~v~~v~~d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~g 239 (880)
T 1q55_A 160 PPIKVSENERGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSEN 239 (880)
T ss_dssp CCEEEESSCCSSSCEEEEECCCSGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESS
T ss_pred cceEEeCCCCCCCCeEEEEEeeCCCCCceEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccccCccEEEEEEEECC
Confidence 0 0000 26889999999999999999999988753
Q ss_pred ------eEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCC---CCceEEEEEEeCC----CCCceE
Q psy8629 134 ------NVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLG---IYNTQRYNIVSGN----TNNAFR 200 (483)
Q Consensus 134 ------~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~---~~~~~~y~l~~~~----~~~~F~ 200 (483)
++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.| .|+.++|+|.++. ..+.|.
T Consensus 240 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~ 319 (880)
T 1q55_A 240 GSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFT 319 (880)
T ss_dssp SCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEE
T ss_pred CCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEE
Confidence 589999999999999999999999999999999999999999999998 6899999999876 347999
Q ss_pred EecccCCCceEEEEEEe-ccCCCCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCC
Q psy8629 201 LSSHREKDGVLYLDLQI-NGVLDRETIPEYSLVIEALDGGSPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVG 279 (483)
Q Consensus 201 i~~~~~~~g~~~~~l~~-~~~LD~E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~g 279 (483)
|++. +|. |.+ .+.||||....|.|+|+|+|+|+|+++++++|+|+|.|+|||+|.|....|.++|+|| ++|
T Consensus 320 Id~~---tG~----I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g 391 (880)
T 1q55_A 320 INRE---TGV----ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIG 391 (880)
T ss_dssp ECTT---TCE----EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCC
T ss_pred EccC---Ccc----EEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCC
Confidence 9984 566 555 4789999999999999999999999999999999999999999999999999999999 999
Q ss_pred cEEEEEEEEeCC--CCCccEEEEEEEecCCCCCcceEEe--C--CccEEEEcccCCCcccceeeeEeEE-----------
Q psy8629 280 TSIFQVFATDAD--AGSNGEVEYSINRRQSDKDGLFNID--S--KSGLIFVNKALDFETKEVHDLVPRF----------- 342 (483)
Q Consensus 280 t~v~~v~a~D~D--~~~~~~i~y~i~~~~~~~~~~F~Id--~--~tG~l~~~~~LD~E~~~~~~l~v~~----------- 342 (483)
+.|+++.|+|+| .+.|+.++|+|.. +..+.|.|+ + .+|.|++.++||||....|.|+|+.
T Consensus 392 t~V~~v~A~D~D~~~g~n~~v~Ysi~~---~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~ 468 (880)
T 1q55_A 392 FEVQRLSVTDLDMPGTPAWQAVYKIRV---NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLP 468 (880)
T ss_dssp CEEEEECBCCCSCTTSTTSCEECCBSC---CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCC
T ss_pred cEEEEEEEECCCCCCCCCceEEEEEec---CCCceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCc
Confidence 999999999999 6789999999953 567899995 3 6899999999999999999998872
Q ss_pred ------EEEee---------------eeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEE
Q psy8629 343 ------AVEIS---------------SFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITM 401 (483)
Q Consensus 343 ------~~~v~---------------~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~ 401 (483)
.+.|. .|.|++++|+.|+++.|+|+|.|.|+.++|+|.. +..++|.|++.+|.|++
T Consensus 469 sst~tV~I~V~DvND~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~---~~~~~F~Id~~tG~I~~ 545 (880)
T 1q55_A 469 TSTATVTVTVEDVNEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN---DPARWLTVNKDNGIVTG 545 (880)
T ss_dssp CCCEEEEEEEECCCCCCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC---CSSCCCEEETTTTEEEE
T ss_pred ceeEEEEEEEEeCCCCCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC---CCCCCEEEeCCccEEEE
Confidence 22221 5789999999999999999999999999999983 45689999999999999
Q ss_pred cccCCCCCC----CeeEEEEEEEECCcCCceEEEEEEEEEEecCCCCCeecCCceEEEEcCCCCCCcEEEEEEEEeCCCC
Q psy8629 402 KSNVDCETD----PVPKLTVIATDNGVPALSSSATVLVTIHDVNDNEPIFDQSFYNVTIPENKPKGSCILKSIFYDIFNI 477 (483)
Q Consensus 402 ~~~lD~E~~----~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~ 477 (483)
.+.||||.. ..|+|+|+|+|+|.|+++++++|+|+|.|+|||+|.|.+. ...|+|+.++|+ + |.|+|+|.+
T Consensus 546 ~~~LDrE~~~~~~~~y~l~V~A~D~g~p~~sst~tv~I~V~DvNDn~P~f~~~--~~~v~E~~~~g~-v--v~A~D~D~~ 620 (880)
T 1q55_A 546 NGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADIP 620 (880)
T ss_dssp CSCCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSCT
T ss_pred CCccCcccccCCCCEEEEEEEEEECCCCCcEeEEEEEEEEEeCCCCCCCccCc--ceEEecCCCCCe-E--EEEecCCCC
Confidence 999999997 8999999999999999999999999999999999999854 678999999998 3 999999966
Q ss_pred CC---CcC
Q psy8629 478 SE---HSF 482 (483)
Q Consensus 478 ~~---~~~ 482 (483)
.+ ++|
T Consensus 621 ~n~~~~~y 628 (880)
T 1q55_A 621 PNTYPYKV 628 (880)
T ss_dssp TTTCCCCC
T ss_pred CCCceEEE
Confidence 53 555
No 2
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1.8e-69 Score=572.32 Aligned_cols=407 Identities=28% Similarity=0.394 Sum_probs=359.7
Q ss_pred EEEEeCCCC--CCeEEEEEEccCCC-CCCCCEEEEecCC-CCCcccEEEeCCccEEEeCccCCccCCceeeEEEEecCCc
Q psy8629 21 DLEISEGVP--VGTRVGFIGDGFVG-DSGPPYLIVPVPG-SAVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLSGE 96 (483)
Q Consensus 21 ~~~v~En~~--~gt~V~~v~a~d~d-~~~~~y~i~~~~~-~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d~~ 96 (483)
.++|+||.+ .++.|++++| |.| +..+.|+|..... ..+.++|.|++.||.|++.++||||+.+.|.|.+.|.|++
T Consensus 6 ~~~v~En~~~~~~~~v~~v~a-d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~ 84 (550)
T 3q2v_A 6 PISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSN 84 (550)
T ss_dssp CEEEETTCCSSSSEEEEECEE-GGGGTSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred CEEEeCCCCCCcCeEEEEEec-CCCCCceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEeCC
Confidence 578999984 6899999999 655 5678999985321 2234689999999999999999999999999999888754
Q ss_pred ceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEE
Q psy8629 97 NVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAK 176 (483)
Q Consensus 97 ~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~ 176 (483)
.. .-..++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+
T Consensus 85 ~~-------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~ 133 (550)
T 3q2v_A 85 GE-------------------------------AVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSAT 133 (550)
T ss_dssp SC-------------------------------BCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBC
T ss_pred CC-------------------------------cccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEE
Confidence 21 01135789999999999999999999999999999999999999999
Q ss_pred eCCCC---CCceEEEEEEeCC----CCCceEEecccCCCceEEEEEEe-ccCCCCCCCCEEEEEEEEEECCCCCeeeEEE
Q psy8629 177 DRDLG---IYNTQRYNIVSGN----TNNAFRLSSHREKDGVLYLDLQI-NGVLDRETIPEYSLVIEALDGGSPPLRGSMI 248 (483)
Q Consensus 177 D~D~~---~~~~~~y~l~~~~----~~~~F~i~~~~~~~g~~~~~l~~-~~~LD~E~~~~~~l~v~a~D~g~p~~~~~~~ 248 (483)
|+|.| .|+.++|+|.+++ ..+.|.|++. +|. +.+ .++||||..+.|.|+|+|+|+|+|+++++++
T Consensus 134 D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~---tG~----i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~ 206 (550)
T 3q2v_A 134 DADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRD---TGV----ISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAK 206 (550)
T ss_dssp CCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTT---TCE----EEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEE
T ss_pred eCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCC---CeE----EEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEE
Confidence 99998 7899999998764 2468999984 566 444 5899999999999999999999999999999
Q ss_pred EEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCcc--EEEEEEEecCCCCCcceEEe----CCccEE
Q psy8629 249 VNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNG--EVEYSINRRQSDKDGLFNID----SKSGLI 322 (483)
Q Consensus 249 v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~--~i~y~i~~~~~~~~~~F~Id----~~tG~l 322 (483)
|+|+|+|+|||+|.|.+..|.+.|+|+ +.|+.|+++.|+|+|.+.++ .++|+|.. +..+.|.|+ +.+|.|
T Consensus 207 v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~---~~~~~F~i~~d~~~~tG~i 282 (550)
T 3q2v_A 207 AVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN---DPDQQFVVVTDPTTNDGIL 282 (550)
T ss_dssp EEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS---CSSCCEEEEECTTTCCEEE
T ss_pred EEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe---CCCCcEEEEecCCCccEEE
Confidence 999999999999999999999999999 99999999999999998776 46799953 678899998 789999
Q ss_pred EEcccCCCcccceeeeEeEEEE-----------------Eee---------------eeeccCCCCeEEEEEEEEeCCCC
Q psy8629 323 FVNKALDFETKEVHDLVPRFAV-----------------EIS---------------SFDEIAEPGTSVFQISAFDQDEG 370 (483)
Q Consensus 323 ~~~~~LD~E~~~~~~l~v~~~~-----------------~v~---------------~v~E~~~~gt~v~~v~a~D~D~~ 370 (483)
++.++||||....|.|+|+... .|. .+.|++++|+.|+++.|+|+|.|
T Consensus 283 ~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g 362 (550)
T 3q2v_A 283 KTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNEAPIFMPAERRVEVPEDFGVGQEITSYTAREPDTF 362 (550)
T ss_dssp EESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCCCCEESSSSCEEEEETTCCSSCEEEECCEECCCCS
T ss_pred EecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCCCCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCC
Confidence 9999999999999999987321 111 68899999999999999999999
Q ss_pred CCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCC-----CeeEEEEEEEECCcCCceEEEEEEEEEEecCCCCC
Q psy8629 371 INSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETD-----PVPKLTVIATDNGVPALSSSATVLVTIHDVNDNEP 445 (483)
Q Consensus 371 ~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~-----~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd~~P 445 (483)
.|+.++|+|.. +..++|.|++.+|.|++.+.||||.. ..|.|+|+|+|+|.|+++++++|+|+|+|+|||+|
T Consensus 363 ~n~~i~y~i~~---~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 439 (550)
T 3q2v_A 363 MDQKITYRIWR---DTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLVLLDVNDNAP 439 (550)
T ss_dssp TTCCCEEEEEE---CTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCSSSCCCEEEEEEEEEECCCCCCC
T ss_pred CCCCEEEEEec---CCCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEeCCCCcceeEEEEEEEEEeCCCCCC
Confidence 99999999973 45689999999999999999999998 99999999999999999999999999999999999
Q ss_pred eecCCceEEEEcCCCCCCcEEEEEEEEeCCCCC
Q psy8629 446 IFDQSFYNVTIPENKPKGSCILKSIFYDIFNIS 478 (483)
Q Consensus 446 ~f~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~ 478 (483)
.|.+ |...|+|+.+.|++ |+|+|+|.+.
T Consensus 440 ~~~~--~~~~v~e~~~~~~~---v~A~D~D~~~ 467 (550)
T 3q2v_A 440 IPEP--RNMQFCQRNPQPHI---ITILDPDLPP 467 (550)
T ss_dssp EESC--SSCEEESSSCCCEE---EEEECCSCTT
T ss_pred cCcC--cccceeecCCCcEE---EEEECCCCCC
Confidence 9985 56789999998865 9999999665
No 3
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.4e-69 Score=572.22 Aligned_cols=413 Identities=26% Similarity=0.391 Sum_probs=362.0
Q ss_pred eEEEEEeCCCC--CCeEEEEEEccCCC-CCCCCEEEEecCCC-CCcccEEEeCCccEEEeCccCCccCCceeeEEEEecC
Q psy8629 19 LRDLEISEGVP--VGTRVGFIGDGFVG-DSGPPYLIVPVPGS-AVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLS 94 (483)
Q Consensus 19 ~~~~~v~En~~--~gt~V~~v~a~d~d-~~~~~y~i~~~~~~-~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d 94 (483)
.|.++|+||++ .+..|+++.+ |.| +..+.|+|...... .+.++|.|++.+|+|+++++||||....|.|.+.|.|
T Consensus 10 ~~~~~v~En~~g~~~~~v~~~~~-d~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D 88 (546)
T 1l3w_A 10 IPPIKVSENERGPFPKRLVQIKS-NKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVS 88 (546)
T ss_dssp CCCEEEESSCCSSSCEEEEECCC-SGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cceeEecCCCCCCCCcEEEEEEc-CCCCCceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEEEEEEEEe
Confidence 57789999998 3456888876 544 56789999864221 1345899999999999999999999999999999888
Q ss_pred CcceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEE
Q psy8629 95 GENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNA 174 (483)
Q Consensus 95 ~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~ 174 (483)
++.. .-..++.|.|+|.|+|||+|.|....|.+.|+|++++|+.|+++.
T Consensus 89 ~~~~-------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~ 137 (546)
T 1l3w_A 89 ENGS-------------------------------PVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVS 137 (546)
T ss_dssp SSSC-------------------------------BCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECC
T ss_pred CCCC-------------------------------cccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEE
Confidence 6521 112357899999999999999999999999999999999999999
Q ss_pred EEeCCCC---CCceEEEEEEeCC----CCCceEEecccCCCceEEEEEEe-ccCCCCCCCCEEEEEEEEEECCCCCeeeE
Q psy8629 175 AKDRDLG---IYNTQRYNIVSGN----TNNAFRLSSHREKDGVLYLDLQI-NGVLDRETIPEYSLVIEALDGGSPPLRGS 246 (483)
Q Consensus 175 a~D~D~~---~~~~~~y~l~~~~----~~~~F~i~~~~~~~g~~~~~l~~-~~~LD~E~~~~~~l~v~a~D~g~p~~~~~ 246 (483)
|+|+|.| .|+.++|+|.++. ..+.|.|++. +|. |.+ .++||||..+.|.|+|+|+|+|+|+++++
T Consensus 138 A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~---tG~----i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~ 210 (546)
T 1l3w_A 138 ATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRE---TGV----ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVE 210 (546)
T ss_dssp EECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTT---TCE----EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEE
T ss_pred EEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCC---Cce----EEEeccCCCcccCceEEEEEEEEECCCCCcceE
Confidence 9999998 6899999999876 3479999984 566 555 47999999999999999999999999999
Q ss_pred EEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCC--CCCccEEEEEEEecCCCCCcceEEe----CCcc
Q psy8629 247 MIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDAD--AGSNGEVEYSINRRQSDKDGLFNID----SKSG 320 (483)
Q Consensus 247 ~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D--~~~~~~i~y~i~~~~~~~~~~F~Id----~~tG 320 (483)
+.|+|+|.|+|||+|.|.+..|.+.|+|+ +.|+.|+++.|+|+| .+.++.++|+|.. +..+.|.|+ ..+|
T Consensus 211 ~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~---~~~~~F~I~~d~~~~~G 286 (546)
T 1l3w_A 211 GKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV---NEGGFFNITTDPESNQG 286 (546)
T ss_dssp CCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC---CTTSCEEEEECTTTCCE
T ss_pred EEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe---CCCceEEEEecCCCCeE
Confidence 99999999999999999999999999999 999999999999999 6789999999953 567899996 3689
Q ss_pred EEEEcccCCCcccceeeeEeEE-----------------EEEee---------------eeeccCCCCeEEEEEEEEeCC
Q psy8629 321 LIFVNKALDFETKEVHDLVPRF-----------------AVEIS---------------SFDEIAEPGTSVFQISAFDQD 368 (483)
Q Consensus 321 ~l~~~~~LD~E~~~~~~l~v~~-----------------~~~v~---------------~v~E~~~~gt~v~~v~a~D~D 368 (483)
.|+++++||||....|.|+|+. .+.|. .|.|++++|+.|+++.|+|+|
T Consensus 287 ~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D 366 (546)
T 1l3w_A 287 ILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPD 366 (546)
T ss_dssp EEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCCCCEESSCEECCCBCTTCCSSEEEEECCEECCC
T ss_pred EEEECccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCCCCcEecceEEEEEeCCCCCCCEEEEEEEECCC
Confidence 9999999999999999998872 22221 578999999999999999999
Q ss_pred CCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCC----CeeEEEEEEEECCcCCceEEEEEEEEEEecCCCC
Q psy8629 369 EGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETD----PVPKLTVIATDNGVPALSSSATVLVTIHDVNDNE 444 (483)
Q Consensus 369 ~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~----~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd~~ 444 (483)
.|.|+.++|+|.. +..++|.|++.+|.|++.+.||||.. ..|.|+|+|+|+|.|+++++++|+|+|+|+|||+
T Consensus 367 ~g~n~~i~ysi~~---~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~ 443 (546)
T 1l3w_A 367 KQQIQKLSYFIGN---DPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNG 443 (546)
T ss_dssp TTCCCCEEEEECC---CSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEEEECCBCCCCCSC
T ss_pred CCCCceEEEEECC---CCCCcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEECCCCCcEeEEEEEEEEEECCCCc
Confidence 9999999999983 35689999999999999999999997 8999999999999999999999999999999999
Q ss_pred CeecCCceEEEEcCCCCCCcEEEEEEEEeCCCCCC---CcC
Q psy8629 445 PIFDQSFYNVTIPENKPKGSCILKSIFYDIFNISE---HSF 482 (483)
Q Consensus 445 P~f~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~~---~~~ 482 (483)
|.|.+. ...|+|+.++|+ + |.|+|+|.+.. ++|
T Consensus 444 P~f~~~--~~~v~e~~~~g~-v--v~A~D~D~~~n~~~~~y 479 (546)
T 1l3w_A 444 PVPSPR--VFTMCDQNPEPQ-V--LTISDADIPPNTYPYKV 479 (546)
T ss_dssp CCBSCC--CEEECSSSCCCE-E--EEBCCSSCTTTTCCCCC
T ss_pred CCccCc--eEEEecCCCCCe-E--EEEEeCCCCCCCccEEE
Confidence 999854 688999999998 3 99999997653 565
No 4
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=3.6e-68 Score=563.43 Aligned_cols=412 Identities=27% Similarity=0.372 Sum_probs=353.5
Q ss_pred EEEEeCCCCCCe---EEEEEEccCCC-CCCCCEEEEecCCC-CCcccEEEeCCccEEEeCccCCccCCceeeEEEEecCC
Q psy8629 21 DLEISEGVPVGT---RVGFIGDGFVG-DSGPPYLIVPVPGS-AVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLSG 95 (483)
Q Consensus 21 ~~~v~En~~~gt---~V~~v~a~d~d-~~~~~y~i~~~~~~-~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d~ 95 (483)
.++|+||.+ |+ .|+++.+ |.+ +..++|+|...... .+.++|.|++.||+|++.++||||+.+.|.|.+.|.|+
T Consensus 6 ~~~v~En~~-g~~~~~i~~~~~-D~~~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~ 83 (559)
T 3q2w_A 6 PINLPENSR-GPFPQELVRIRS-DRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDI 83 (559)
T ss_dssp CEEEESSCC-CCSSEEEEECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred cEEeeCCCC-CCCCeEEEEEee-CCCCCcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEEC
Confidence 578999997 64 4455543 333 55789999854221 12368999999999999999999999999999999887
Q ss_pred cceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEE
Q psy8629 96 ENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAA 175 (483)
Q Consensus 96 ~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a 175 (483)
+.... ..++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|
T Consensus 84 g~~~~-------------------------------~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A 132 (559)
T 3q2w_A 84 NGNQV-------------------------------ENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTA 132 (559)
T ss_dssp TSCEE-------------------------------EEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCE
T ss_pred CCCcc-------------------------------ceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEE
Confidence 53211 01578999999999999999999999999999999999999999
Q ss_pred EeCCCC--CCceEEEEEEeCCCC----CceEEecccCCCceEEEEEEecc-CCCCCCCCEEEEEEEEEECCC---CCeee
Q psy8629 176 KDRDLG--IYNTQRYNIVSGNTN----NAFRLSSHREKDGVLYLDLQING-VLDRETIPEYSLVIEALDGGS---PPLRG 245 (483)
Q Consensus 176 ~D~D~~--~~~~~~y~l~~~~~~----~~F~i~~~~~~~g~~~~~l~~~~-~LD~E~~~~~~l~v~a~D~g~---p~~~~ 245 (483)
+|+|.| .|+.++|+|.++.+. +.|.|++. +|. |.+.+ .||||+...|.|.|+|+|+++ +++++
T Consensus 133 ~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~---tG~----i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~ 205 (559)
T 3q2w_A 133 IDADDPNALNGMLRYRILSQAPSTPSPNMFTINNE---TGD----IITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSN 205 (559)
T ss_dssp ECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTT---TCE----EEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEE
T ss_pred EcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCC---ceE----EEEEeccCCcccCCEEEEEEEEEECCCCCCCCccc
Confidence 999987 689999999876543 68999984 566 56666 999999999999999999765 45899
Q ss_pred EEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCC--ccEEEEEEEecCCCCCcceEE----eCCc
Q psy8629 246 SMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGS--NGEVEYSINRRQSDKDGLFNI----DSKS 319 (483)
Q Consensus 246 ~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~--~~~i~y~i~~~~~~~~~~F~I----d~~t 319 (483)
+++|+|+|.|+|||+|.|....|.+.|+|+. +|+.|+++.|+|+|.+. ++.++|+|.. ++..+.|.| ++.+
T Consensus 206 t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~--g~~~~~F~I~~~~~~~~ 282 (559)
T 3q2w_A 206 TATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISG--GDPTGRFAILTDPNSND 282 (559)
T ss_dssp EEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEE--SCTTCCEEEEECTTTCE
T ss_pred eEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEec--CCCCCceEEEecCCCCc
Confidence 9999999999999999999999999999997 89999999999999976 5689999964 567899999 5789
Q ss_pred cEEEEcccCCCcccceeeeEeEEE--------------------EEee---------------eeeccCCCCeEEEEEEE
Q psy8629 320 GLIFVNKALDFETKEVHDLVPRFA--------------------VEIS---------------SFDEIAEPGTSVFQISA 364 (483)
Q Consensus 320 G~l~~~~~LD~E~~~~~~l~v~~~--------------------~~v~---------------~v~E~~~~gt~v~~v~a 364 (483)
|.|++.++||||....|.|+|... +.|. .+.|+.++|+.|+++.|
T Consensus 283 G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND~P~f~~~~~~~~v~En~~~g~~v~~v~A 362 (559)
T 3q2w_A 283 GLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNENPYFAPNPKIIRQEEGLHAGTMLTTLTA 362 (559)
T ss_dssp EEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCCCCEESSSEEEEEEESCCCTTCEEEECCE
T ss_pred EEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCCCCcccccceEEEEeCCCCCCCEEEEEEE
Confidence 999999999999999999988721 2221 57899999999999999
Q ss_pred EeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCC----CeeEEEEEEEECCcCCceEEEEEEEEEEec
Q psy8629 365 FDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETD----PVPKLTVIATDNGVPALSSSATVLVTIHDV 440 (483)
Q Consensus 365 ~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~----~~y~l~V~a~D~g~p~~s~~~~v~I~V~dv 440 (483)
+|+|.|.|+.++|+|.. +..++|.|++.+|.|++.+.||||.. ..|.|+|+|+|+|.|+++++++|.|.|+|+
T Consensus 363 ~D~D~g~n~~i~Ysi~~---~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~p~~ss~~~v~I~V~Dv 439 (559)
T 3q2w_A 363 QDPDRYMQQNIRYTKLS---DPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLLDI 439 (559)
T ss_dssp ECSCSSSCCCEEEEEEE---CTTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECSSSCCEEEEEEEEEEECC
T ss_pred ECCCCCCCCceEEEEcc---CCccceEecCCceEEEEccccCcccccccCCEEEEEEEEEcCCCCcceEEEEEEEEEEEc
Confidence 99999999999999984 35689999999999999999999986 899999999999999999999999999999
Q ss_pred CCCCCeecCCceEEEEcCCCCCCcEEEEEEEEeCCCCC---CCcC
Q psy8629 441 NDNEPIFDQSFYNVTIPENKPKGSCILKSIFYDIFNIS---EHSF 482 (483)
Q Consensus 441 Nd~~P~f~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~---~~~~ 482 (483)
|||+|.|....+ .|+|+ .|..+++|+|+|+|.+. .++|
T Consensus 440 NDn~P~f~~~~~--~v~e~--~~~~v~~v~A~D~D~~~n~~~~~y 480 (559)
T 3q2w_A 440 NDNAPQVLPQEA--ETCET--PEPNSINITALDYDIDPNAGPFAF 480 (559)
T ss_dssp SCCCCEESCTTC--CCCSC--CCTTCEEECEECSCCTTSSSSCEE
T ss_pred cCCCCcccCCce--EEeec--CCCcEEEEEEEcCCCCCCCCCEEE
Confidence 999999987654 57898 44557899999999733 3555
No 5
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=7.7e-61 Score=507.25 Aligned_cols=399 Identities=23% Similarity=0.271 Sum_probs=331.1
Q ss_pred HhhhcCceEEEEEeCCCCCCeEEEEEEccCCC-----CCCCCEEEEecCCCCC-cccEEEeCCccEEEeCc-cCCccCCc
Q psy8629 12 AVAADEHLRDLEISEGVPVGTRVGFIGDGFVG-----DSGPPYLIVPVPGSAV-DTDLSIEQNTGEIRTKV-PLDRETRS 84 (483)
Q Consensus 12 ~~~~~~~~~~~~v~En~~~gt~V~~v~a~d~d-----~~~~~y~i~~~~~~~~-~~~F~Id~~tG~i~~~~-~LD~E~~~ 84 (483)
++.|.+..|.++|+||+++|+.|++++|+|.| +..++|+|.+...... ...|.|++.||+|++.+ +||||...
T Consensus 105 ~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~ 184 (559)
T 3q2w_A 105 RPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQ 184 (559)
T ss_dssp CCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCC
T ss_pred CCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCC
Confidence 46799999999999999999999999999977 2358999986433211 25899999999999987 99999999
Q ss_pred eeeEEEEecCCcceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCC
Q psy8629 85 SYSLVAIPLSGENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENT 164 (483)
Q Consensus 85 ~y~l~v~a~d~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~ 164 (483)
.|.|.|+|.|++.. +.+ ....+++|.|+|.|+|||+|.|....|.+.|+|+.
T Consensus 185 ~y~l~V~A~D~~g~----------------------p~~------~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~ 236 (559)
T 3q2w_A 185 QYTLIIQATDMEGN----------------------PTY------GLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR 236 (559)
T ss_dssp EEEEEEEEEHHHHC----------------------TTT------CCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC
T ss_pred EEEEEEEEEECCCC----------------------CCC------CccceEEEEEEEEeCCCCCCccccccceeEecCCC
Confidence 99999999986420 000 01126789999999999999999999999999997
Q ss_pred CCCeEEEEEEEEeCCCCC--CceEEEEEEeCCCCCceEEeccc-CCCceEEEEEEeccCCCCCCCCEEEEEEEEEECC--
Q psy8629 165 PRDVKRTLNAAKDRDLGI--YNTQRYNIVSGNTNNAFRLSSHR-EKDGVLYLDLQINGVLDRETIPEYSLVIEALDGG-- 239 (483)
Q Consensus 165 ~~gt~v~~v~a~D~D~~~--~~~~~y~l~~~~~~~~F~i~~~~-~~~g~~~~~l~~~~~LD~E~~~~~~l~v~a~D~g-- 239 (483)
+|+.++++.|+|+|.+. |+.++|+|.+++..+.|.|.... ..+|. |.+.++||||....|.|+|.|+|++
T Consensus 237 -~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~----i~~~~~LD~E~~~~y~l~V~A~D~~~~ 311 (559)
T 3q2w_A 237 -VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGL----VTVVKPIDFETNRMFVLTVAAENQVPL 311 (559)
T ss_dssp -SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEE----EEECSCCCTTTCSEEEEEEECCBSSCC
T ss_pred -CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEE----EEeCCCCCCccCceEEEEEEEEcCCcc
Confidence 89999999999999986 56899999998888999995321 14566 7889999999999999999999964
Q ss_pred ----CCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEE
Q psy8629 240 ----SPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNI 315 (483)
Q Consensus 240 ----~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~I 315 (483)
.|+++++++|+|+|.|+|| +|.|....|.+.|+|+.+.|+.|+++.|+|+|.|.++.++|+|.. +..++|.|
T Consensus 312 ~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~---~~~~~f~I 387 (559)
T 3q2w_A 312 AKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLS---DPANWLKI 387 (559)
T ss_dssp CTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEE---CTTCCEEE
T ss_pred ccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEcc---CCccceEe
Confidence 3678999999999999999 699999999999999999999999999999999999999999964 45789999
Q ss_pred eCCccEEEEcccCCCccc----ceeeeEeE--------------EEEEee--------------eeeccCCCCeEEEEEE
Q psy8629 316 DSKSGLIFVNKALDFETK----EVHDLVPR--------------FAVEIS--------------SFDEIAEPGTSVFQIS 363 (483)
Q Consensus 316 d~~tG~l~~~~~LD~E~~----~~~~l~v~--------------~~~~v~--------------~v~E~~~~gt~v~~v~ 363 (483)
++.+|.|++.++||||.. ..|.|+|. +.+.|. .+.|+ ++..+++|.
T Consensus 388 d~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~p~~ss~~~v~I~V~DvNDn~P~f~~~~~~v~e~--~~~~v~~v~ 465 (559)
T 3q2w_A 388 DPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLLDINDNAPQVLPQEAETCET--PEPNSINIT 465 (559)
T ss_dssp CTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECSSSCCEEEEEEEEEEECCSCCCCEESCTTCCCCSC--CCTTCEEEC
T ss_pred cCCceEEEEccccCcccccccCCEEEEEEEEEcCCCCcceEEEEEEEEEEEccCCCCcccCCceEEeec--CCCcEEEEE
Confidence 999999999999999986 89999887 222222 45566 455578999
Q ss_pred EEeCCCCCCc-eEEEEEeeCCCCCCCcEEEeCCCcEEEEc-ccCCCCCCCeeEEEEEEEECCcCCceEEEEEEEEEEecC
Q psy8629 364 AFDQDEGINS-VITYSLRENTDDHPSWFQIDSKSGLITMK-SNVDCETDPVPKLTVIATDNGVPALSSSATVLVTIHDVN 441 (483)
Q Consensus 364 a~D~D~~~~~-~v~y~l~~~~~~~~~~F~id~~tG~i~~~-~~lD~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvN 441 (483)
|+|+|.+.|+ .++|+|....++..+.|.|++.+|.+... ..++++....|.|.|+|+|+|.|+++++++|+|.|+|||
T Consensus 466 A~D~D~~~n~~~~~ysl~~~~~~~~~~f~i~~~~G~~~~~~~~~~~~~~~~~~l~V~~~D~g~P~lsst~tv~V~V~d~n 545 (559)
T 3q2w_A 466 ALDYDIDPNAGPFAFDLPLSPVTIKRNWTINRLNGDFAQLNLKIKFLEAGIYEVPIIITDSGNPPKSNISILRVKVCQCD 545 (559)
T ss_dssp EECSCCTTSSSSCEEECCSSSHHHHHHEEEEECSSSCEEEEECSCC-CCEEEEEEEEEECSSSSCCEEEEEEEEEEC---
T ss_pred EEcCCCCCCCCCEEEEEcCCCCccCCCeEEEecCCCEEEEEeccCcccCcEEEEEEEEEECCCCccceeEEEEEEEEeCC
Confidence 9999998887 79999984333346789999999987655 478999999999999999999999999999999999999
Q ss_pred CCCCeecC
Q psy8629 442 DNEPIFDQ 449 (483)
Q Consensus 442 d~~P~f~~ 449 (483)
|+++....
T Consensus 546 ~~~~~~~~ 553 (559)
T 3q2w_A 546 SNGDCTDV 553 (559)
T ss_dssp --------
T ss_pred CCCccccc
Confidence 98766543
No 6
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=4.3e-59 Score=492.93 Aligned_cols=390 Identities=22% Similarity=0.256 Sum_probs=326.1
Q ss_pred HhhhcCceEEEEEeCCCCCCeEEEEEEccCCCC------CCCCEEEEecCCC-CCcccEEEeCCccEEEe-CccCCccCC
Q psy8629 12 AVAADEHLRDLEISEGVPVGTRVGFIGDGFVGD------SGPPYLIVPVPGS-AVDTDLSIEQNTGEIRT-KVPLDRETR 83 (483)
Q Consensus 12 ~~~~~~~~~~~~v~En~~~gt~V~~v~a~d~d~------~~~~y~i~~~~~~-~~~~~F~Id~~tG~i~~-~~~LD~E~~ 83 (483)
++.|.+..|.++|+||+++|+.|++++|+|.|. ..++|+|.+.... ....+|.|++.+|.|++ .++||||..
T Consensus 105 ~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~ 184 (550)
T 3q2v_A 105 RPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESY 184 (550)
T ss_dssp CCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTC
T ss_pred CCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccC
Confidence 467999999999999999999999999999773 3589999865322 13458999999999998 579999999
Q ss_pred ceeeEEEEecCCcceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCC
Q psy8629 84 SSYSLVAIPLSGENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPEN 163 (483)
Q Consensus 84 ~~y~l~v~a~d~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~ 163 (483)
..|.|+++|.|++. +....++.|.|+|.|+|||+|.|....|.+.|+|+
T Consensus 185 ~~y~l~V~A~D~g~-------------------------------~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En 233 (550)
T 3q2v_A 185 PTYTLVVQAADLQG-------------------------------EGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN 233 (550)
T ss_dssp SEEEEEEEEESGGG-------------------------------TSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS
T ss_pred cEEEEEEEEEcCCC-------------------------------CCeeEEEEEEEEecccCCCCCEEecceeEEEEecC
Confidence 99999999998642 11234789999999999999999999999999999
Q ss_pred CCCCeEEEEEEEEeCCCCCCce--EEEEEEeCCCCCceEEeccc-CCCceEEEEEEeccCCCCCCCCEEEEEEEEEECC-
Q psy8629 164 TPRDVKRTLNAAKDRDLGIYNT--QRYNIVSGNTNNAFRLSSHR-EKDGVLYLDLQINGVLDRETIPEYSLVIEALDGG- 239 (483)
Q Consensus 164 ~~~gt~v~~v~a~D~D~~~~~~--~~y~l~~~~~~~~F~i~~~~-~~~g~~~~~l~~~~~LD~E~~~~~~l~v~a~D~g- 239 (483)
++|+.++++.|+|+|.+.++. ++|+|.+ +..+.|.|+... ..+|. |.+.++||||....|.|+|+|+|++
T Consensus 234 -~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~~~~~F~i~~d~~~~tG~----i~~~~~LD~E~~~~y~l~V~a~D~~~ 307 (550)
T 3q2v_A 234 -EVNARIATLKVTDDDAPNTPAWKAVYTVVN-DPDQQFVVVTDPTTNDGI----LKTAKGLDFEAKQQYILHVRVENEEP 307 (550)
T ss_dssp -CSSCCCEEECEECCSCTTSTTTCEEEEESS-CSSCCEEEEECTTTCCEE----EEESSCCCTTTCSEEEEEEEEEESSC
T ss_pred -CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-CCCCcEEEEecCCCccEE----EEecccCCccccceEEEEEEEEeCCC
Confidence 999999999999999998774 6699987 667899998432 14676 7889999999999999999999987
Q ss_pred --CCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeC
Q psy8629 240 --SPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDS 317 (483)
Q Consensus 240 --~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~ 317 (483)
.|.++++++|+|+|+|+|| +|.|....|.+.|+|+++.|+.|+++.|+|+|.|.++.++|+|.. +..++|.|++
T Consensus 308 ~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~---~~~~~f~id~ 383 (550)
T 3q2v_A 308 FEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWR---DTANWLEINP 383 (550)
T ss_dssp CCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEE---CTTCCEEECT
T ss_pred CCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEec---CCCCcEEEeC
Confidence 3568999999999999999 999999999999999999999999999999999999999999954 5678999999
Q ss_pred CccEEEEcccCCCccc-----ceeeeEeE--------------EEEEee--------------eeeccCCCCeEEEEEEE
Q psy8629 318 KSGLIFVNKALDFETK-----EVHDLVPR--------------FAVEIS--------------SFDEIAEPGTSVFQISA 364 (483)
Q Consensus 318 ~tG~l~~~~~LD~E~~-----~~~~l~v~--------------~~~~v~--------------~v~E~~~~gt~v~~v~a 364 (483)
.+|.|++.++||||.. ..|.|+|. +.+.|. .+.|+.+.|.. |.|
T Consensus 384 ~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P~~~~~~~~v~e~~~~~~~---v~A 460 (550)
T 3q2v_A 384 ETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLVLLDVNDNAPIPEPRNMQFCQRNPQPHI---ITI 460 (550)
T ss_dssp TTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCSSSCCCEEEEEEEEEECCCCCCCEESCSSCEEESSSCCCEE---EEE
T ss_pred CCcEEEECCccCcccccccCCCEEEEEEEEEeCCCCcceeEEEEEEEEEeCCCCCCcCcCcccceeecCCCcEE---EEE
Confidence 9999999999999998 89999987 222222 57788887765 999
Q ss_pred EeCCCCCCc-eEEEEEeeCCCCCCCcEEEe--CCCcEEEEcccCCCCCCCeeEEEEEEEECCcCCceEEEEEEEEEEecC
Q psy8629 365 FDQDEGINS-VITYSLRENTDDHPSWFQID--SKSGLITMKSNVDCETDPVPKLTVIATDNGVPALSSSATVLVTIHDVN 441 (483)
Q Consensus 365 ~D~D~~~~~-~v~y~l~~~~~~~~~~F~id--~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvN 441 (483)
+|+|.+.|+ .++|+|..+. ...|.+. ..+|.+...+.+++|....|.|+|+|+|+|. ++++++|+|.|+|+|
T Consensus 461 ~D~D~~~n~~~~~~~l~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~y~l~V~a~D~g~--lss~~tv~V~V~d~n 535 (550)
T 3q2v_A 461 LDPDLPPNTSPFTAELTHGA---SVNWTIEYNDAAQESLILQPRKDLEIGEYKIHLKLADNQN--KDQVTTLDVHVCDCE 535 (550)
T ss_dssp ECCSCTTSSSSCCCEEEECC---SSSCEEECCSTTSSEEEEECSCC----CEECEEECCSSSC--CCCBCCCEEEEECCC
T ss_pred ECCCCCCCCCCEEEEECCCC---CCCeEEEEecCCCcEEEEEecccCCCceEEEEEEEEECCc--ceeEEEEEEEEEEec
Confidence 999999888 5889998542 2344444 4458888888999999999999999999987 899999999999999
Q ss_pred CCCCeecCC
Q psy8629 442 DNEPIFDQS 450 (483)
Q Consensus 442 d~~P~f~~~ 450 (483)
||+|.+...
T Consensus 536 dn~~~~~~~ 544 (550)
T 3q2v_A 536 GTVNNCMKA 544 (550)
T ss_dssp C--------
T ss_pred CCCcchhhh
Confidence 999987543
No 7
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=7.7e-58 Score=468.01 Aligned_cols=357 Identities=25% Similarity=0.350 Sum_probs=307.5
Q ss_pred CeEEEEEEccCCC---CCCCCEEEEecCCCCCcccEEEeC--------CccEEEeCccCCccCC---ceeeEEEEecCCc
Q psy8629 31 GTRVGFIGDGFVG---DSGPPYLIVPVPGSAVDTDLSIEQ--------NTGEIRTKVPLDRETR---SSYSLVAIPLSGE 96 (483)
Q Consensus 31 gt~V~~v~a~d~d---~~~~~y~i~~~~~~~~~~~F~Id~--------~tG~i~~~~~LD~E~~---~~y~l~v~a~d~~ 96 (483)
...|.+|+|+|+| +..+.|+|... +....|.|++ .+|.|+++++||||.. ..|.+.+.|.|++
T Consensus 8 ~~Pv~~v~AtD~D~g~n~~v~Ysi~~~---~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g 84 (419)
T 3ubh_A 8 VRPTKRIEFTEADGDTEGKSVFQLEKE---TDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMG 84 (419)
T ss_dssp EEEEEEEEEEGGGGCSTTCEEEECCCS---STTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--
T ss_pred ccceEEEEEEcccCCCCceEEEEEecC---CCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCC
Confidence 4568999999977 55689999754 2345899987 8999999999999998 5788877777643
Q ss_pred ceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCc--eEEEEeCCCCCCeEEEEEE
Q psy8629 97 NVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPF--MSIEFPENTPRDVKRTLNA 174 (483)
Q Consensus 97 ~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~--~~~~V~E~~~~gt~v~~v~ 174 (483)
... | ......+.|.|+|.|+|||+|.|.... |.+.|+|++++|+.|+++.
T Consensus 85 ~~~-------~---------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~ 136 (419)
T 3ubh_A 85 HNA-------G---------------------IKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQ 136 (419)
T ss_dssp CCS-------S---------------------SCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECC
T ss_pred CCC-------C---------------------CCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEE
Confidence 100 0 000015789999999999999999877 7899999999999999999
Q ss_pred EEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEEEEEECCCC----CeeeEEEEE
Q psy8629 175 AKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVIEALDGGSP----PLRGSMIVN 250 (483)
Q Consensus 175 a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v~a~D~g~p----~~~~~~~v~ 250 (483)
|+|+|.|.| ++|+|..++..+.|.|++. +|. |.+.+.||||....|.|+|+|+|+|+| ++++++.++
T Consensus 137 A~D~D~g~n--~~y~i~~~~~~~~F~I~~~---tG~----i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~ 207 (419)
T 3ubh_A 137 ARDPDTDHN--IHYFIVRDRTGGRFEVDER---SGV----VRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEER 207 (419)
T ss_dssp EECSSTTCC--EEEEEEEESSSSCEEECTT---TCE----EEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEE
T ss_pred EECCCCCce--eEEEEEeCCCCCeEEEeCC---ceE----EEEecccccccccEEEEEEEEEECCCCccCcccccceEEE
Confidence 999999876 8999998877789999984 566 778899999999999999999998764 578889999
Q ss_pred EEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeCCccEEEEcccCCC
Q psy8629 251 VTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDSKSGLIFVNKALDF 330 (483)
Q Consensus 251 I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~~tG~l~~~~~LD~ 330 (483)
|.|.| |||+|.|.+..|.+.|+||.+.|+.|+++.|+|+| ++.++|+|.. .++..++|.|++.+|.|++.++|||
T Consensus 208 I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~-~~~~~~~F~I~~~tG~i~~~~~LD~ 282 (419)
T 3ubh_A 208 LSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKA-QGQGAGTFNIGPTSGIVKLAKELDF 282 (419)
T ss_dssp EEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEE-SSSCCSSEEECTTTCEEEECSCCCT
T ss_pred EEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEec-CCCCCCcEEEECCCCEEEECcccCc
Confidence 99999 99999999999999999999999999999999998 6789999974 4566789999999999999999999
Q ss_pred cccc---eeeeEeEEE-------------EEee-----------------eeeccCCCCeEEEEEEEEeCCCCCCceEEE
Q psy8629 331 ETKE---VHDLVPRFA-------------VEIS-----------------SFDEIAEPGTSVFQISAFDQDEGINSVITY 377 (483)
Q Consensus 331 E~~~---~~~l~v~~~-------------~~v~-----------------~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y 377 (483)
|... .|.|+|... +.|. .+.|++++|+.|+++.|+|+|.|.|+.++|
T Consensus 283 E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y 362 (419)
T 3ubh_A 283 EDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEY 362 (419)
T ss_dssp TCTTSCSEEEEEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEE
T ss_pred cccccccEEEEEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEE
Confidence 9876 688888721 1111 478999999999999999999999999999
Q ss_pred EEeeCCCCCCCcEEEeCCCcEEEEcccCCCCC-CCeeEEEEEEEECCcCCceEEEEEEEEEEe
Q psy8629 378 SLRENTDDHPSWFQIDSKSGLITMKSNVDCET-DPVPKLTVIATDNGVPALSSSATVLVTIHD 439 (483)
Q Consensus 378 ~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~-~~~y~l~V~a~D~g~p~~s~~~~v~I~V~d 439 (483)
+|.. ++|.|++ +|.|++.+.||||. ...|.|+|+|+|+|.|+++++++|.|.|.|
T Consensus 363 ~i~~------~~F~Id~-~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~p~~sst~~v~I~v~n 418 (419)
T 3ubh_A 363 LVSD------DHFAVDS-NGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATVRVYTKN 418 (419)
T ss_dssp EESC------TTEEECT-TCEEEECSCSSSSCTTCEEEEEEEEEECCSSCCEEEEEEEEEEEC
T ss_pred EEcC------CcEEECC-CeEEEECcccCcccCCceEEEEEEEEECCcCCceeEEEEEEEEec
Confidence 9962 4799998 89999999999998 689999999999999999999999999986
No 8
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.6e-59 Score=495.56 Aligned_cols=386 Identities=22% Similarity=0.241 Sum_probs=330.0
Q ss_pred HhhhcCceEEEEEeCCCCCCeEEEEEEccCCCC------CCCCEEEEecCCC-CCcccEEEeCCccEEEeC-ccCCccCC
Q psy8629 12 AVAADEHLRDLEISEGVPVGTRVGFIGDGFVGD------SGPPYLIVPVPGS-AVDTDLSIEQNTGEIRTK-VPLDRETR 83 (483)
Q Consensus 12 ~~~~~~~~~~~~v~En~~~gt~V~~v~a~d~d~------~~~~y~i~~~~~~-~~~~~F~Id~~tG~i~~~-~~LD~E~~ 83 (483)
++.|.+..|.++|+||+++|+.|++++|+|.|. ..++|+|...... .....|.|++.||.|++. ++||||..
T Consensus 111 ~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~ 190 (546)
T 1l3w_A 111 RPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKF 190 (546)
T ss_dssp CCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTC
T ss_pred cCEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccC
Confidence 467999999999999999999999999999763 4689999865321 134589999999999985 79999999
Q ss_pred ceeeEEEEecCCcceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCC
Q psy8629 84 SSYSLVAIPLSGENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPEN 163 (483)
Q Consensus 84 ~~y~l~v~a~d~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~ 163 (483)
..|.|.|.|.|++.. ....++.|.|+|.|+|||+|.|....|.+.|+|+
T Consensus 191 ~~y~l~V~A~D~g~~-------------------------------~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En 239 (546)
T 1l3w_A 191 PEYTLTVQATDLEGA-------------------------------GLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN 239 (546)
T ss_dssp CEEEEEEEEEHHHHT-------------------------------SCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS
T ss_pred ceEEEEEEEEECCCC-------------------------------CcceEEEEEEEEeecCCCCCccccccceEEEEeC
Confidence 999999999886521 0112678999999999999999999999999999
Q ss_pred CCCCeEEEEEEEEeCC--CCCCceEEEEEEeCCCCCceEEecccC-CCceEEEEEEeccCCCCCCCCEEEEEEEEEECC-
Q psy8629 164 TPRDVKRTLNAAKDRD--LGIYNTQRYNIVSGNTNNAFRLSSHRE-KDGVLYLDLQINGVLDRETIPEYSLVIEALDGG- 239 (483)
Q Consensus 164 ~~~gt~v~~v~a~D~D--~~~~~~~~y~l~~~~~~~~F~i~~~~~-~~g~~~~~l~~~~~LD~E~~~~~~l~v~a~D~g- 239 (483)
++|+.|+++.|+|+| .+.|+.++|+|.+ +..+.|.|+.... .+|. |.+.++||||....|.|+|+|+|++
T Consensus 240 -~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~~~~F~I~~d~~~~~G~----i~~~~~LD~E~~~~y~l~V~a~D~~~ 313 (546)
T 1l3w_A 240 -EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGI----LTTAKGLDFELRKQYVLQITVENAEP 313 (546)
T ss_dssp -SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEE----EEESSCCCCSSCCCEEEEECCEESSC
T ss_pred -CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-CCCceEEEEecCCCCeEE----EEECccCCcccccEEEEEEEEEECCC
Confidence 999999999999999 7789999999987 6678999974321 4577 7889999999999999999999986
Q ss_pred --CCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeC
Q psy8629 240 --SPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDS 317 (483)
Q Consensus 240 --~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~ 317 (483)
.|+++++++|+|+|.|+|| +|.|....|.+.|+|+.+.|+.|+++.|+|+|.|.++.++|+|.. +..++|.|++
T Consensus 314 ~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~---~~~~~F~Id~ 389 (546)
T 1l3w_A 314 FSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN---DPARWLTVNK 389 (546)
T ss_dssp CSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC---CSSCCCEEET
T ss_pred CCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECC---CCCCcEEEeC
Confidence 3568999999999999999 999999999999999999999999999999999999999999953 4578999999
Q ss_pred CccEEEEcccCCCccc----ceeeeEeEEE------------EEee----------------eeeccCCCCeEEEEEEEE
Q psy8629 318 KSGLIFVNKALDFETK----EVHDLVPRFA------------VEIS----------------SFDEIAEPGTSVFQISAF 365 (483)
Q Consensus 318 ~tG~l~~~~~LD~E~~----~~~~l~v~~~------------~~v~----------------~v~E~~~~gt~v~~v~a~ 365 (483)
.+|.|++.++||||.. ..|.|+|... +.|. .+.|+.++|+ + +.|+
T Consensus 390 ~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~~~v~e~~~~g~-v--v~A~ 466 (546)
T 1l3w_A 390 DNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSPRVFTMCDQNPEPQ-V--LTIS 466 (546)
T ss_dssp TTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSCCCEEECSSSCCCE-E--EEBC
T ss_pred CcEEEEECCccCCccccCCCCEEEEEEEEEECCCCCcEeEEEEEEEEEECCCCcCCccCceEEEecCCCCCe-E--EEEE
Confidence 9999999999999998 8999988822 1221 5779999998 3 9999
Q ss_pred eCCCCCCce-EEEEEeeCCCCCCCcEEE--eCCCcEEEEcccCCCCCCCeeEEEEEEEECCcCCceEEEEEEEEEEecCC
Q psy8629 366 DQDEGINSV-ITYSLRENTDDHPSWFQI--DSKSGLITMKSNVDCETDPVPKLTVIATDNGVPALSSSATVLVTIHDVND 442 (483)
Q Consensus 366 D~D~~~~~~-v~y~l~~~~~~~~~~F~i--d~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd 442 (483)
|+|.+.|+. ++|+|.. ...+.|.| +..++.+.+ +.+|||....|.|+|+|+|+|. ++++++|+|.|+|+||
T Consensus 467 D~D~~~n~~~~~y~l~~---~~~~~f~i~~~g~~~~~~~-~~~d~e~~~~y~l~V~a~D~g~--~s~~~~v~I~V~d~ND 540 (546)
T 1l3w_A 467 DADIPPNTYPYKVSLSH---GSDLTWKAELDSKGTSMLL-SPTQQLKKGDYSIYVLLSDAQN--NPQLTVVNATVCSCEG 540 (546)
T ss_dssp CSSCTTTTCCCCCBCCS---CSSSSCBCCBCTTSSEEEE-BCSSCCCSSCBCCEEECCSSSC--CCEEEECCEEECSCSS
T ss_pred eCCCCCCCccEEEEECC---CCCCCEEEeccCCceEEEe-cccccccCceEEEEEEEEECCc--CceEEEEEEEEEeccC
Confidence 999999886 8999973 23457887 333334443 4568999999999999999987 8999999999999999
Q ss_pred CCCee
Q psy8629 443 NEPIF 447 (483)
Q Consensus 443 ~~P~f 447 (483)
|++.+
T Consensus 541 n~~~C 545 (546)
T 1l3w_A 541 KAIKC 545 (546)
T ss_dssp SCCCC
T ss_pred CCCCc
Confidence 97754
No 9
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=1.9e-57 Score=501.66 Aligned_cols=389 Identities=21% Similarity=0.237 Sum_probs=333.0
Q ss_pred HhhhcCceEEEEEeCCCCCCeEEEEEEccCCCC------CCCCEEEEecCCC-CCcccEEEeCCccEEEeC-ccCCccCC
Q psy8629 12 AVAADEHLRDLEISEGVPVGTRVGFIGDGFVGD------SGPPYLIVPVPGS-AVDTDLSIEQNTGEIRTK-VPLDRETR 83 (483)
Q Consensus 12 ~~~~~~~~~~~~v~En~~~gt~V~~v~a~d~d~------~~~~y~i~~~~~~-~~~~~F~Id~~tG~i~~~-~~LD~E~~ 83 (483)
++.|.+..|.++|+||+++|+.|++++|+|.|. ..++|+|.+.... .....|.|++.||.|++. ++||||..
T Consensus 260 ~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~ 339 (880)
T 1q55_A 260 RPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKF 339 (880)
T ss_dssp CCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTC
T ss_pred CCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHc
Confidence 467999999999999999999999999999763 3589999865321 134589999999999996 68999999
Q ss_pred ceeeEEEEecCCcceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCC
Q psy8629 84 SSYSLVAIPLSGENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPEN 163 (483)
Q Consensus 84 ~~y~l~v~a~d~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~ 163 (483)
..|.|.|+|.|++.. ....+++|.|+|.|+|||+|.|....|.+.|+|+
T Consensus 340 ~~y~l~V~A~D~g~~-------------------------------~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En 388 (880)
T 1q55_A 340 PEYTLTVQATDLEGA-------------------------------GLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN 388 (880)
T ss_dssp CEEEEEEEEEHHHHT-------------------------------SCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS
T ss_pred ceeEEEEEEEECCCC-------------------------------CccceeEEEEEEEeccCCCCCccccceEEEeecC
Confidence 999999999886521 0112678999999999999999999999999999
Q ss_pred CCCCeEEEEEEEEeCC--CCCCceEEEEEEeCCCCCceEEeccc-CCCceEEEEEEeccCCCCCCCCEEEEEEEEEECC-
Q psy8629 164 TPRDVKRTLNAAKDRD--LGIYNTQRYNIVSGNTNNAFRLSSHR-EKDGVLYLDLQINGVLDRETIPEYSLVIEALDGG- 239 (483)
Q Consensus 164 ~~~gt~v~~v~a~D~D--~~~~~~~~y~l~~~~~~~~F~i~~~~-~~~g~~~~~l~~~~~LD~E~~~~~~l~v~a~D~g- 239 (483)
++|+.|+++.|+|+| .+.|+.++|+|.+ +..+.|.|+... ..+|. |.+.++||||....|.|+|+|+|++
T Consensus 389 -~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~~~~F~I~~d~~~~~G~----i~~~~~LD~E~~~~y~l~V~A~D~~~ 462 (880)
T 1q55_A 389 -EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGI----LTTAKGLDFELRKQYVLQITVENAEP 462 (880)
T ss_dssp -SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEE----EEESSCCCCSSCCCEEEEECCEESSC
T ss_pred -CCCcEEEEEEEECCCCCCCCCceEEEEEec-CCCceEEEEecCCCceEE----EecccCCCcccCCcEEEEEEEEECCC
Confidence 999999999999999 6789999999987 667899996422 14576 7889999999999999999999987
Q ss_pred --CCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeC
Q psy8629 240 --SPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDS 317 (483)
Q Consensus 240 --~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~ 317 (483)
.|+++++++|+|+|.|+|| +|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.++.++|+|.. +..++|.|++
T Consensus 463 ~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~---~~~~~F~Id~ 538 (880)
T 1q55_A 463 FSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN---DPARWLTVNK 538 (880)
T ss_dssp CSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC---CSSCCCEEET
T ss_pred CCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC---CCCCCEEEeC
Confidence 3568999999999999999 999999999999999999999999999999999999999999953 4578999999
Q ss_pred CccEEEEcccCCCccc----ceeeeEeEEE------------EEee----------------eeeccCCCCeEEEEEEEE
Q psy8629 318 KSGLIFVNKALDFETK----EVHDLVPRFA------------VEIS----------------SFDEIAEPGTSVFQISAF 365 (483)
Q Consensus 318 ~tG~l~~~~~LD~E~~----~~~~l~v~~~------------~~v~----------------~v~E~~~~gt~v~~v~a~ 365 (483)
.+|.|++.++||||.. ..|.++|... +.|. .+.|+.++|+ + +.|+
T Consensus 539 ~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D~g~p~~sst~tv~I~V~DvNDn~P~f~~~~~~v~E~~~~g~-v--v~A~ 615 (880)
T 1q55_A 539 DNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSPRVFTMCDQNPEPQ-V--LTIS 615 (880)
T ss_dssp TTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSCCCEEECSSSCCCE-E--EEBC
T ss_pred CccEEEECCccCcccccCCCCEEEEEEEEEECCCCCcEeEEEEEEEEEeCCCCCCCccCcceEEecCCCCCe-E--EEEe
Confidence 9999999999999997 8999988822 2221 5778999997 3 9999
Q ss_pred eCCCCCCce-EEEEEeeCCCCCCCcEEE--eCCCcEEEEcccCCCCCCCeeEEEEEEEECCcCCceEEEEEEEEEEecCC
Q psy8629 366 DQDEGINSV-ITYSLRENTDDHPSWFQI--DSKSGLITMKSNVDCETDPVPKLTVIATDNGVPALSSSATVLVTIHDVND 442 (483)
Q Consensus 366 D~D~~~~~~-v~y~l~~~~~~~~~~F~i--d~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd 442 (483)
|+|.+.|+. ++|+|..+ ....|.| +..++.+.+. .+|+|....|.|+|+|+|+|. ++++++|+|+|+|+||
T Consensus 616 D~D~~~n~~~~~ysl~~~---~~~~f~i~~~g~~~~l~~~-~~d~~~~~~y~l~V~a~D~g~--lsst~tv~V~V~d~nd 689 (880)
T 1q55_A 616 DADIPPNTYPYKVSLSHG---SDLTWKAELDSKGTSMLLS-PTQQLKKGDYSIYVLLSDAQN--NPQLTVVNATVCSCEG 689 (880)
T ss_dssp CSSCTTTTCCCCCBCCSC---SSSSCBCCBCTTSSEEEEB-CSSCCCSSCBCCEEECCSSSC--CCEEEECCEEECSCSS
T ss_pred cCCCCCCCceEEEEECCC---CCCCeEEEcccceeEEEec-cCccccCCEEEEEEEEEECCc--ceeeEEEEEEEEecCC
Confidence 999999886 89999842 3346877 4445566654 558999999999999999988 8999999999999999
Q ss_pred CCCeecCC
Q psy8629 443 NEPIFDQS 450 (483)
Q Consensus 443 ~~P~f~~~ 450 (483)
|+|.|...
T Consensus 690 ~~~~~~~~ 697 (880)
T 1q55_A 690 KAIKCQEK 697 (880)
T ss_dssp SCCCCC--
T ss_pred Cccccccc
Confidence 99988643
No 10
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1e-51 Score=406.94 Aligned_cols=297 Identities=30% Similarity=0.420 Sum_probs=255.0
Q ss_pred EEEEEeCC--CCCCeEEEEEEccCCC--CCCCCEEEEecCCCCCcccEEEeCCccEEEeCccCCccCCceeeEEEEecCC
Q psy8629 20 RDLEISEG--VPVGTRVGFIGDGFVG--DSGPPYLIVPVPGSAVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLSG 95 (483)
Q Consensus 20 ~~~~v~En--~~~gt~V~~v~a~d~d--~~~~~y~i~~~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d~ 95 (483)
+.++|+|| .+.|+.|+++. +|.| +..++|+|... +...+|.|++.+|+|++.++||||....|.|.+.|.|+
T Consensus 5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g~~~i~Y~l~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 80 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGD---GAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDF 80 (322)
T ss_dssp CCEECCCSCCCSSCEECCCCC-CCCCCSSCCCEEEEEET---TBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECT
T ss_pred ceeeeccccCCCCCEEEEEEE-EcCCCCCCEEEEEEECC---CCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEEC
Confidence 35788999 89999999996 7866 45789999853 23458999999999999999999999999999999986
Q ss_pred cceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEE
Q psy8629 96 ENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAA 175 (483)
Q Consensus 96 ~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a 175 (483)
+... .. ..++.+.|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|
T Consensus 81 ~~~~----------------------~~--------~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A 130 (322)
T 2a62_A 81 ETNK----------------------PL--------EPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTA 130 (322)
T ss_dssp TTCS----------------------EE--------EEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCC
T ss_pred CCCC----------------------cc--------cceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEE
Confidence 5210 00 01467899999999999999999999999999999999999999
Q ss_pred EeCCC---CCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEec-cCCCCCCCCEEEEEEEEEECCCCC--eeeEEEE
Q psy8629 176 KDRDL---GIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQIN-GVLDRETIPEYSLVIEALDGGSPP--LRGSMIV 249 (483)
Q Consensus 176 ~D~D~---~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~-~~LD~E~~~~~~l~v~a~D~g~p~--~~~~~~v 249 (483)
+|+|. |.|+.++|+|.+++ ..|.|++. +|. |.+. +.||||....|.|.|+|+|+|.|+ ++++++|
T Consensus 131 ~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~---tG~----i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v 201 (322)
T 2a62_A 131 TDADDPVYGNSAKLVYSILEGQ--PYFSIEPE---TAI----IKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTL 201 (322)
T ss_dssp CBCSCSSSTTSSCEEEEEEECT--TTEEECTT---TCC----EEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEE
T ss_pred EeCCCCCCCccEEEEEEEccCC--CCEEEecC---CCE----EEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEE
Confidence 99996 78899999999864 58999984 466 6667 899999999999999999999874 8999999
Q ss_pred EEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeCCccEEEEcccCC
Q psy8629 250 NVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDSKSGLIFVNKALD 329 (483)
Q Consensus 250 ~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~~tG~l~~~~~LD 329 (483)
+|+|.|+|||+|.|.+..|.+.|+|+.+.|+.|+++.|+|+|.|.|+.++|+|.. ++..
T Consensus 202 ~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~--g~~~------------------- 260 (322)
T 2a62_A 202 TVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIID--GDGT------------------- 260 (322)
T ss_dssp EEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC-----CC-------------------
T ss_pred EEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEEC--CCCC-------------------
Confidence 9999999999999999999999999999999999999999999888888888842 2223
Q ss_pred CcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEe----CCCcEEEEcccC
Q psy8629 330 FETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQID----SKSGLITMKSNV 405 (483)
Q Consensus 330 ~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id----~~tG~i~~~~~l 405 (483)
++|.|+ +.+|.|++.++|
T Consensus 261 ----------------------------------------------------------~~F~I~~d~~~~tG~i~~~~~L 282 (322)
T 2a62_A 261 ----------------------------------------------------------ALFEITSDAQAQDGVIRLRKPL 282 (322)
T ss_dssp ----------------------------------------------------------SSBCCBCCTTTSEEEEEBCSCC
T ss_pred ----------------------------------------------------------CcEEEeccCCCceEEEEECCcC
Confidence 345555 357999999999
Q ss_pred CCCCCCeeEEEEEEEECCcCC-------ceEEEEEEEEEE
Q psy8629 406 DCETDPVPKLTVIATDNGVPA-------LSSSATVLVTIH 438 (483)
Q Consensus 406 D~E~~~~y~l~V~a~D~g~p~-------~s~~~~v~I~V~ 438 (483)
|||....|.|+|+|+|.|.|+ ++++++|.|.|.
T Consensus 283 D~E~~~~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 283 DFETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIVVE 322 (322)
T ss_dssp CCSSCCEEEEEEEEECCCSSCTTSSCCCCCCCCEEEEEEC
T ss_pred CcccCCeEEEEEEEEECCCCCccccCCCcccEEEEEEEEC
Confidence 999999999999999999875 467888888873
No 11
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=1.9e-49 Score=405.81 Aligned_cols=302 Identities=23% Similarity=0.329 Sum_probs=264.2
Q ss_pred eEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccC-----CCceEEEEEEeccCCCCCCC---CEEEEEEEEEECC
Q psy8629 168 VKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHRE-----KDGVLYLDLQINGVLDRETI---PEYSLVIEALDGG 239 (483)
Q Consensus 168 t~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~-----~~g~~~~~l~~~~~LD~E~~---~~~~l~v~a~D~g 239 (483)
..+.+|.|+|+|.|.|+.++|+|.+++....|+|++..+ .+|. |.+.++||||+. ..|.|.|.|+|.|
T Consensus 9 ~Pv~~v~AtD~D~g~n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~----i~~~~~LD~E~~~~~~~~~~~V~a~d~g 84 (419)
T 3ubh_A 9 RPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGA----VRVKKKWDYEELGPEKTIDFWVIITNMG 84 (419)
T ss_dssp EEEEEEEEEGGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECTTSE----EEESSCCCGGGSCTTCEEEEEEEEEC--
T ss_pred cceEEEEEEcccCCCCceEEEEEecCCCCceEEEcCCCccEEECCCcE----EEECCccCccccCccceEEEEEEEEeCC
Confidence 678999999999999999999998877778899986110 3566 788999999997 6999999999988
Q ss_pred CC---CeeeEEEEEEEEEecCCCCCeecCCc--eEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceE
Q psy8629 240 SP---PLRGSMIVNVTIQDVNDNQPIFNQSR--YFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFN 314 (483)
Q Consensus 240 ~p---~~~~~~~v~I~V~dvNd~~P~f~~~~--~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~ 314 (483)
.| ++++.+.|+|+|.|+|||+|.|.... |...|+|++++|+.|+++.|+|+|.|.+ ++|+|.. ++..+.|.
T Consensus 85 ~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~--~~~~~~F~ 160 (419)
T 3ubh_A 85 HNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVR--DRTGGRFE 160 (419)
T ss_dssp CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEE--ESSSSCEE
T ss_pred CCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEe--CCCCCeEE
Confidence 65 67889999999999999999999876 7899999999999999999999999876 9999964 35568999
Q ss_pred EeCCccEEEEcccCCCcccceeeeEeEEEE------------------Eee---------------eeeccCCCCeEEEE
Q psy8629 315 IDSKSGLIFVNKALDFETKEVHDLVPRFAV------------------EIS---------------SFDEIAEPGTSVFQ 361 (483)
Q Consensus 315 Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~------------------~v~---------------~v~E~~~~gt~v~~ 361 (483)
|++.+|.|++++.||||....|.|+|+... .|. .|.||+++|+.|++
T Consensus 161 I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~dndn~P~F~~~~y~~~v~En~~~gt~v~~ 240 (419)
T 3ubh_A 161 VDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDSDIIS 240 (419)
T ss_dssp ECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEESCCCCEESSSCEEEEEETTCCTTCEEEE
T ss_pred EeCCceEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEECCCCCCceecCeeEEEecCCCCCCcEEEE
Confidence 999999999999999999999999887321 111 68899999999999
Q ss_pred EEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCCC---eeEEEEEEEECCcCCceEEEEEEEEEE
Q psy8629 362 ISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETDP---VPKLTVIATDNGVPALSSSATVLVTIH 438 (483)
Q Consensus 362 v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~~---~y~l~V~a~D~g~p~~s~~~~v~I~V~ 438 (483)
+.|+|+| |+.++|+|.. .++..++|.|++.+|.|++.++||||... .|.|+|+|+|.+ ++++++++|+|.|.
T Consensus 241 v~A~D~d---n~~i~Ysi~~-~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~-~~~s~~~~v~I~V~ 315 (419)
T 3ubh_A 241 IKAKSFA---DREIRYTLKA-QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDS-GGFSTSVDLTIRVT 315 (419)
T ss_dssp CCEECSS---CCCCEEEEEE-SSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTT-TSCEEEEEEEEEEE
T ss_pred EEEecCC---CCceEEEEec-CCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCC-CCcEEEEEEEEEEE
Confidence 9999997 7889999974 24566899999999999999999999875 799999999764 45899999999999
Q ss_pred ecCCCCCeecCCceEE-EEcCCCCCCcEEEEEEEEeCCCCC--CCcC
Q psy8629 439 DVNDNEPIFDQSFYNV-TIPENKPKGSCILKSIFYDIFNIS--EHSF 482 (483)
Q Consensus 439 dvNd~~P~f~~~~~~~-~V~E~~~~g~~v~~v~a~D~D~~~--~~~~ 482 (483)
|+|||+|.|..+.|.. .|+|+.++|+.|++|.|+|+|.+. .++|
T Consensus 316 DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y 362 (419)
T 3ubh_A 316 DVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEY 362 (419)
T ss_dssp CCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEE
T ss_pred ccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEE
Confidence 9999999999999987 799999999999999999999643 5665
No 12
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=3.3e-49 Score=389.39 Aligned_cols=297 Identities=23% Similarity=0.304 Sum_probs=246.3
Q ss_pred CceEEEEEeCCCCCCeEEEEEEccCCCCCCCCEEEEecCCCCCcccEEEeCCccEEEeCccCCccCC-----ceeeEEEE
Q psy8629 17 EHLRDLEISEGVPVGTRVGFIGDGFVGDSGPPYLIVPVPGSAVDTDLSIEQNTGEIRTKVPLDRETR-----SSYSLVAI 91 (483)
Q Consensus 17 ~~~~~~~v~En~~~gt~V~~v~a~d~d~~~~~y~i~~~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~-----~~y~l~v~ 91 (483)
..+|.++.+|+.+.|++++++.+.+. ...|+|... ..+|.|++ +|+|+++++||||.. ..|.|.+.
T Consensus 6 ~~~~~atd~D~g~ng~v~y~l~~~~~---~~~f~i~~~-----~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~ 76 (316)
T 3ubf_A 6 TKRIEFTEADGDTEGKSVFQLEKETD---KETFKIRDD-----NPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIIT 76 (316)
T ss_dssp EEEEEEESGGGCSTTCEEEECCCSST---TCEEEESSC-----CSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEE
T ss_pred eEEEEEEecCCCCCceEEEEEEcCCC---cceEEEeCC-----CCeEEECC-CeEEEECCccChhhcccccceEEEEEEE
Confidence 35789999999999999999988653 578999853 23899998 999999999999985 35666666
Q ss_pred ecCCcceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCc--eEEEEeCCCCCCeE
Q psy8629 92 PLSGENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPF--MSIEFPENTPRDVK 169 (483)
Q Consensus 92 a~d~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~--~~~~V~E~~~~gt~ 169 (483)
|.|++.. ..-..++.|.|.|.|+|||+|.|.... |.+.|+|++++|+.
T Consensus 77 a~d~~~~------------------------------~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~ 126 (316)
T 3ubf_A 77 NMGHNAG------------------------------IKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTP 126 (316)
T ss_dssp C-------------------------------------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCE
T ss_pred EcCCCCC------------------------------CcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCE
Confidence 6554310 001126889999999999999999887 89999999999999
Q ss_pred EEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEEEEEECCC----CCeee
Q psy8629 170 RTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVIEALDGGS----PPLRG 245 (483)
Q Consensus 170 v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v~a~D~g~----p~~~~ 245 (483)
|+++.|+|+|.|.| ++|+|..++..+.|.|++ .+|. |.+.++||||....|.|+|+|+|+|+ |++++
T Consensus 127 v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~---~tG~----i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~ 197 (316)
T 3ubf_A 127 VFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDE---RSGV----VRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQS 197 (316)
T ss_dssp EEECCEECSSTTCC--EEEEEEEEESSSCEEECT---TTCE----EEECSSCCCCTTCEEEEEEEEEESCC-------CB
T ss_pred EEEEEEECCCCCCc--eEEEEEeCCCCCEEEEEC---CccE----EEECCcCCcccCcEEEEEEEEEeCCCCCCCccccc
Confidence 99999999999876 899999877788999998 4566 78899999999999999999999885 46888
Q ss_pred EEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeCCccEEEEc
Q psy8629 246 SMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDSKSGLIFVN 325 (483)
Q Consensus 246 ~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~~tG~l~~~ 325 (483)
++.++|.|.| |||+|.|.+..|.+.|+|+.++|+.|+++.|+|+| ++.++|+|...
T Consensus 198 ~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~-------------------- 253 (316)
T 3ubf_A 198 TPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQ-------------------- 253 (316)
T ss_dssp CCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEE--------------------
T ss_pred eEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcC--------------------
Confidence 9999999999 99999999999999999999999999999999998 56788887420
Q ss_pred ccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccC
Q psy8629 326 KALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNV 405 (483)
Q Consensus 326 ~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~l 405 (483)
++..++|.|++.+|.|++.++|
T Consensus 254 ----------------------------------------------------------~~~~~~F~Id~~tG~i~~~~~L 275 (316)
T 3ubf_A 254 ----------------------------------------------------------GQGAGTFNIGPTSGIVKLAKEL 275 (316)
T ss_dssp ----------------------------------------------------------SSCTTTEEECTTTCEEEECSCC
T ss_pred ----------------------------------------------------------CCCCCeEEEECCeEEEEECCcC
Confidence 2235678888889999999999
Q ss_pred CCCCC---CeeEEEEEEEECCcCCceEEEEEEEEEEecCCCC
Q psy8629 406 DCETD---PVPKLTVIATDNGVPALSSSATVLVTIHDVNDNE 444 (483)
Q Consensus 406 D~E~~---~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd~~ 444 (483)
|||.. ..|.|+|+|+|.+. +++++++|+|+|.|+||||
T Consensus 276 D~E~~~~~~~y~l~V~A~dd~g-~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 276 DFEDLRQPHVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp CSSCTTSCSEEEEEEEEEESSS-SCEEEEEEEEEEECC----
T ss_pred CccccCCCceEEEEEEEEECCC-CCEEEEEEEEEEEecCCCC
Confidence 99987 79999999996433 5899999999999999986
No 13
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1.6e-42 Score=341.37 Aligned_cols=236 Identities=32% Similarity=0.457 Sum_probs=208.6
Q ss_pred EEEEeCC--CCCCeEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEEE
Q psy8629 157 SIEFPEN--TPRDVKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVIE 234 (483)
Q Consensus 157 ~~~V~E~--~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v~ 234 (483)
.+.|+|+ .+.|+.|+++. +|+|.| ++.++|+|.+++....|.|++. +|. |.+.++||||....|.|+|+
T Consensus 6 ~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~l~v~ 76 (322)
T 2a62_A 6 QMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDI---TGD----IHAIKRLDREEKAEYTLTAQ 76 (322)
T ss_dssp CEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEETTBTTTEEEETT---TTE----EEECSCCCTTTCSBCCEEEE
T ss_pred eeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECCCCCCcEEEeCC---cCE----EEEeccCCcccccEEEEEEE
Confidence 4788999 88999999986 899988 6789999987665679999984 566 77899999999999999999
Q ss_pred EEECCC-CCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCC---CCccEEEEEEEecCCCCC
Q psy8629 235 ALDGGS-PPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADA---GSNGEVEYSINRRQSDKD 310 (483)
Q Consensus 235 a~D~g~-p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~ 310 (483)
|+|+++ +++++.+.++|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+|. |.|+.++|+|
T Consensus 77 a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i-------- 148 (322)
T 2a62_A 77 AVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSI-------- 148 (322)
T ss_dssp EECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEE--------
T ss_pred EEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEE--------
Confidence 999875 5688899999999999999999999999999999999999999999999995 4444555554
Q ss_pred cceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcE
Q psy8629 311 GLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWF 390 (483)
Q Consensus 311 ~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F 390 (483)
..+ ..+|
T Consensus 149 ---------------------------------------------------------------------~~~----~~~F 155 (322)
T 2a62_A 149 ---------------------------------------------------------------------LEG----QPYF 155 (322)
T ss_dssp ---------------------------------------------------------------------EEC----TTTE
T ss_pred ---------------------------------------------------------------------ccC----CCCE
Confidence 321 2468
Q ss_pred EEeCCCcEEEEc-ccCCCCCCCeeEEEEEEEECCcCC--ceEEEEEEEEEEecCCCCCeecCCceEEEEcCCCCCCcEEE
Q psy8629 391 QIDSKSGLITMK-SNVDCETDPVPKLTVIATDNGVPA--LSSSATVLVTIHDVNDNEPIFDQSFYNVTIPENKPKGSCIL 467 (483)
Q Consensus 391 ~id~~tG~i~~~-~~lD~E~~~~y~l~V~a~D~g~p~--~s~~~~v~I~V~dvNd~~P~f~~~~~~~~V~E~~~~g~~v~ 467 (483)
.|++.+|.|++. +.||||....|.|+|+|+|+|.|+ ++++++|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|+
T Consensus 156 ~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~ 235 (322)
T 2a62_A 156 SIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIG 235 (322)
T ss_dssp EECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEE
T ss_pred EEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEE
Confidence 888889999988 899999999999999999999874 89999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCC--CCCcC
Q psy8629 468 KSIFYDIFNI--SEHSF 482 (483)
Q Consensus 468 ~v~a~D~D~~--~~~~~ 482 (483)
+|.|+|+|.. +.++|
T Consensus 236 ~v~A~D~D~g~n~~i~Y 252 (322)
T 2a62_A 236 RVKANDQDIGENAQSSY 252 (322)
T ss_dssp EEECCCSSCGGGTCCEE
T ss_pred EEEEEeCCCCCCceEEE
Confidence 9999999964 35655
No 14
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=2.3e-39 Score=300.15 Aligned_cols=205 Identities=33% Similarity=0.501 Sum_probs=184.2
Q ss_pred CCCCccCCCceE--EEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCC
Q psy8629 146 DNAPTFPSPFMS--IEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDR 223 (483)
Q Consensus 146 D~~P~f~~~~~~--~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~ 223 (483)
|++|.|....|. +.|+|++++|+.|+++.|+|+|.+ .++|+|.+++..+.|.|++. +|. |.+.++|||
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~~---~~~y~i~~~~~~~~F~Id~~---tG~----i~~~~~LD~ 72 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDND---PLVFGVSGEEASRFFAVEPD---TGV----VWLRQPLDR 72 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTCC---CCEEEEESHHHHHHEEECTT---TCE----EEESSCCCT
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCCC---cEEEEEeCCCCCCcEEEeCC---CCE----EEECCccCC
Confidence 569999999997 799999999999999999999964 58999987655678999984 566 788999999
Q ss_pred CCCCEEEEEEEEEECCCCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEE
Q psy8629 224 ETIPEYSLVIEALDGGSPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSIN 303 (483)
Q Consensus 224 E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~ 303 (483)
|....|.|.|.|+|+++ .+++.++|+|.|+|||+|.|.+..|.+.|+|+.+.|+.|+++.|+|+|.|.++.++|+|.
T Consensus 73 E~~~~y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~ 149 (210)
T 3mvs_A 73 ETKSEFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQ 149 (210)
T ss_dssp TTCCEEEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEES
T ss_pred cccceEEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEe
Confidence 99999999999999876 467899999999999999999999999999999999999999999999988777777772
Q ss_pred ecCCCCCcceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCC
Q psy8629 304 RRQSDKDGLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENT 383 (483)
Q Consensus 304 ~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~ 383 (483)
.
T Consensus 150 ~------------------------------------------------------------------------------- 150 (210)
T 3mvs_A 150 P------------------------------------------------------------------------------- 150 (210)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred CCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEECC-cCCceEEEEEEEEEEecCCCC
Q psy8629 384 DDHPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATDNG-VPALSSSATVLVTIHDVNDNE 444 (483)
Q Consensus 384 ~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g-~p~~s~~~~v~I~V~dvNd~~ 444 (483)
..++|.|++.+|.|++.++||||....|.|+|+|+|.| .|+++++++++|+|.|+||||
T Consensus 151 --~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 151 --PSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp --CCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred --CCCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 12478888899999999999999999999999999998 578999999999999999986
No 15
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=314.36 Aligned_cols=214 Identities=17% Similarity=0.113 Sum_probs=181.1
Q ss_pred hhcCceEEEEEeCCCCCCeEEEEEEccCCCC-CCCCEEEEec------CCCCCcccEEEeCCccEEEeCccCCccCCcee
Q psy8629 14 AADEHLRDLEISEGVPVGTRVGFIGDGFVGD-SGPPYLIVPV------PGSAVDTDLSIEQNTGEIRTKVPLDRETRSSY 86 (483)
Q Consensus 14 ~~~~~~~~~~v~En~~~gt~V~~v~a~d~d~-~~~~y~i~~~------~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y 86 (483)
.|.+..|.++|+||+++|+.|++++|+|.|. ..+.|+|... ...+...+|.|++.||+|+++++||||....|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y 81 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSWEKL 81 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESSCBCHHHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECCcCChhHhhhh
Confidence 5899999999999999999999999999883 3567777510 00113358999999999999999999999999
Q ss_pred ------------eEEEEecCCcceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCc----
Q psy8629 87 ------------SLVAIPLSGENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPT---- 150 (483)
Q Consensus 87 ------------~l~v~a~d~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~---- 150 (483)
.|.|.|.|++... .....++.|.|+|.|+|||+|.
T Consensus 82 ~~~~~G~p~~~~~l~V~a~D~g~~~-----------------------------~~~~~~~~v~I~V~DvNDn~P~~~~~ 132 (246)
T 2x2u_A 82 SVRNRGFPLLTVYLKVFLSPTSLRE-----------------------------GECQWPGCARVYFSFFNTSFPACSSL 132 (246)
T ss_dssp HHTSTTSCCCEEEEEEECC------------------------------------CCCTTTEEEEEEEEESSCCCCGGGC
T ss_pred ccccCCCcccceEEEEEEEcCCCCC-----------------------------CcccceEEEEEEEEECCCCCCccccc
Confidence 8888888765210 0122367899999999999999
Q ss_pred ------cCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCC
Q psy8629 151 ------FPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRE 224 (483)
Q Consensus 151 ------f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E 224 (483)
|....|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|.+++ ...|.|++. +|. |.+.++||||
T Consensus 133 ~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~---tG~----i~~~~~LDrE 204 (246)
T 2x2u_A 133 KPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGE-GLPFRSAPD---SLE----VSTRWALDRE 204 (246)
T ss_dssp CHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCT-TSSEECCTT---CCE----EEESSCBCTT
T ss_pred cccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCC-CCCEEEECC---cCE----EEeCCccCcc
Confidence 99999999999999999999999999999999999999999875 679999984 566 7889999999
Q ss_pred CCCEEEEEEEEEE-CCCCCeeeEEEEEEEEEecCCCCCeec
Q psy8629 225 TIPEYSLVIEALD-GGSPPLRGSMIVNVTIQDVNDNQPIFN 264 (483)
Q Consensus 225 ~~~~~~l~v~a~D-~g~p~~~~~~~v~I~V~dvNd~~P~f~ 264 (483)
....|.|+|.|+| .|+|+++++++|+|+|+|+|||+|.|.
T Consensus 205 ~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 205 QREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp TCSEEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred ccceEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 9999999999998 666999999999999999999999995
No 16
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=1.3e-38 Score=295.33 Aligned_cols=201 Identities=30% Similarity=0.459 Sum_probs=171.5
Q ss_pred eEEEEeCCC--CCCeEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEE
Q psy8629 156 MSIEFPENT--PRDVKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVI 233 (483)
Q Consensus 156 ~~~~V~E~~--~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v 233 (483)
|.+.|.|+. +.|+.|+++ |+|+|.| ++.++|+|.+++....|.|++. +|. |.+.++||||....|.|+|
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~l~v 76 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDK---SGN----IHATKTLDREERAQYTLMA 76 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTT---TCE----EEECSCCCTTTCSEEEEEE
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECC---ceE----EEECCccCCccCCEEEEEE
Confidence 578999994 689999998 7999998 7899999988665679999984 566 7788999999999999999
Q ss_pred EEEECCC-CCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCC---CCccEEEEEEEecCCCC
Q psy8629 234 EALDGGS-PPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADA---GSNGEVEYSINRRQSDK 309 (483)
Q Consensus 234 ~a~D~g~-p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~ 309 (483)
+|+|++. +++++++.|+|+|.|+|||+|.|.+..|.++|+|+++.|+.|+++.|+|+|. |.|+.++|+|
T Consensus 77 ~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i------- 149 (215)
T 2a4e_A 77 QAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSI------- 149 (215)
T ss_dssp EEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEE-------
T ss_pred EEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEE-------
Confidence 9999875 6789999999999999999999999999999999999999999999999996 5555555555
Q ss_pred CcceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCc
Q psy8629 310 DGLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSW 389 (483)
Q Consensus 310 ~~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~ 389 (483)
..+ ...
T Consensus 150 ----------------------------------------------------------------------~~~----~~~ 155 (215)
T 2a4e_A 150 ----------------------------------------------------------------------LEG----QPY 155 (215)
T ss_dssp ----------------------------------------------------------------------EES----TTT
T ss_pred ----------------------------------------------------------------------eCC----CCc
Confidence 321 246
Q ss_pred EEEeCCCcEEEEc-ccCCCCCCCeeEEEEEEEECCcC--CceEEEEEEEEEEecCCCCCe
Q psy8629 390 FQIDSKSGLITMK-SNVDCETDPVPKLTVIATDNGVP--ALSSSATVLVTIHDVNDNEPI 446 (483)
Q Consensus 390 F~id~~tG~i~~~-~~lD~E~~~~y~l~V~a~D~g~p--~~s~~~~v~I~V~dvNd~~P~ 446 (483)
|.|++.+|.|++. +.||||....|.|+|+|+|+|.| +++++++|+|+|.|+|||+|.
T Consensus 156 F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 156 FSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 8899999999998 99999999999999999999976 689999999999999999995
No 17
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=315.23 Aligned_cols=211 Identities=17% Similarity=0.079 Sum_probs=180.4
Q ss_pred ccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCC--CceEE------EEEEeCCCCCceEEecccCCCceEEEEEEeccCC
Q psy8629 150 TFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGI--YNTQR------YNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVL 221 (483)
Q Consensus 150 ~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~--~~~~~------y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~L 221 (483)
.|.+..|.+.|+|++++|+.|+++.|+|+|.|. +..+. |++.++ ...+|.|++. +|. |.+.++|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~---tG~----i~~~~~L 73 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH-ENNWIRIQED---TGL----LYLQRSL 73 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE-ECCSEEECTT---TCE----EEESSCB
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC-CCCEEEECCC---cEE----EEECCcC
Confidence 488999999999999999999999999999854 44554 665544 3579999984 566 7889999
Q ss_pred CCCCCCEE------------EEEEEEEECCCC--CeeeEEEEEEEEEecCCCCCe----------ecCCceEEEecCCCC
Q psy8629 222 DRETIPEY------------SLVIEALDGGSP--PLRGSMIVNVTIQDVNDNQPI----------FNQSRYFATVPENAT 277 (483)
Q Consensus 222 D~E~~~~~------------~l~v~a~D~g~p--~~~~~~~v~I~V~dvNd~~P~----------f~~~~~~~~v~E~~~ 277 (483)
|||....| .|+|.|+|+|.| ++++++.|+|+|.|+|||+|. |.+..|.+.|+||.+
T Consensus 74 DrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~ 153 (246)
T 2x2u_A 74 DHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRP 153 (246)
T ss_dssp CHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSC
T ss_pred ChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCC
Confidence 99999999 999999999987 688899999999999999999 999999999999999
Q ss_pred CCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCe
Q psy8629 278 VGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGT 357 (483)
Q Consensus 278 ~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt 357 (483)
+|+.|+++.|+|+|.|.|+.++|+|..
T Consensus 154 ~Gt~v~~v~A~D~D~g~n~~i~Y~i~~----------------------------------------------------- 180 (246)
T 2x2u_A 154 PGTFHQFRLLPVQFLCPQISVAYRLLE----------------------------------------------------- 180 (246)
T ss_dssp CCEEEECSCHHHHHHCTTSCEEEEEES-----------------------------------------------------
T ss_pred CCcEEEEEEEEcCCCCCCcEEEEEEcc-----------------------------------------------------
Confidence 999999999999998877777777742
Q ss_pred EEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEE-CCcCCceEEEEEEEE
Q psy8629 358 SVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATD-NGVPALSSSATVLVT 436 (483)
Q Consensus 358 ~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D-~g~p~~s~~~~v~I~ 436 (483)
+ ...+|.|++.+|.|++.++||||....|.|+|+|+| .|.|+++++++|.|+
T Consensus 181 --------------------------~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~ 233 (246)
T 2x2u_A 181 --------------------------G-EGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVT 233 (246)
T ss_dssp --------------------------C-TTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEE
T ss_pred --------------------------C-CCCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEE
Confidence 1 135688888899999999999999999999999998 677999999999999
Q ss_pred EEecCCCCCeec
Q psy8629 437 IHDVNDNEPIFD 448 (483)
Q Consensus 437 V~dvNd~~P~f~ 448 (483)
|.|+|||+|.|.
T Consensus 234 V~DvNDn~P~F~ 245 (246)
T 2x2u_A 234 VYDEDDSAPEFE 245 (246)
T ss_dssp EECSSCCSCCCC
T ss_pred EEEeCCCCCccC
Confidence 999999999996
No 18
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=1.9e-38 Score=293.98 Aligned_cols=203 Identities=29% Similarity=0.374 Sum_probs=181.8
Q ss_pred HhhhcCceEE--EEEeCCCCCCeEEEEEEccCCCCCCCCEEEEecCCCCCcccEEEeCCccEEEeCccCCccCCceeeEE
Q psy8629 12 AVAADEHLRD--LEISEGVPVGTRVGFIGDGFVGDSGPPYLIVPVPGSAVDTDLSIEQNTGEIRTKVPLDRETRSSYSLV 89 (483)
Q Consensus 12 ~~~~~~~~~~--~~v~En~~~gt~V~~v~a~d~d~~~~~y~i~~~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~ 89 (483)
++.|.+..|. ++|+||+++|+.|+++.|+|+|+..+.|+|... +...+|.|++.+|.|+++++||||....|.|.
T Consensus 5 ~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~~~~~y~i~~~---~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~ 81 (210)
T 3mvs_A 5 LPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDNDPLVFGVSGE---EASRFFAVEPDTGVVWLRQPLDRETKSEFTVE 81 (210)
T ss_dssp CCEECCGGGTSCEEEETTCCTTCEEEECCEECTTCCCCEEEEESH---HHHHHEEECTTTCEEEESSCCCTTTCCEEEEE
T ss_pred CCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCCCcEEEEEeCC---CCCCcEEEeCCCCEEEECCccCCcccceEEEE
Confidence 3568888887 799999999999999999999988899999843 23458999999999999999999999999999
Q ss_pred EEecCCcceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeE
Q psy8629 90 AIPLSGENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVK 169 (483)
Q Consensus 90 v~a~d~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~ 169 (483)
+.|.|++.. .++.+.|+|.|+|||+|.|....|.+.|+|+.++|+.
T Consensus 82 v~a~D~~~~----------------------------------~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~ 127 (210)
T 3mvs_A 82 FSVSDHQGV----------------------------------ITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTP 127 (210)
T ss_dssp EEEECSSCE----------------------------------EEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCE
T ss_pred EEEEeCCCC----------------------------------EEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCE
Confidence 988886521 1468999999999999999999999999999999999
Q ss_pred EEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEEEEEECC-CCCeeeEEE
Q psy8629 170 RTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVIEALDGG-SPPLRGSMI 248 (483)
Q Consensus 170 v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v~a~D~g-~p~~~~~~~ 248 (483)
|+++.|+|+|.|.|+.++|+|.++ ...|.|++ .+|. |.+.++||||....|.|+|+|+|+| .|+++++++
T Consensus 128 v~~v~A~D~D~g~n~~v~Y~i~~~--~~~F~Id~---~tG~----i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~ 198 (210)
T 3mvs_A 128 IFIVNATDPDLGAGGSVLYSFQPP--SPFFAIDS---ARGI----VTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLAN 198 (210)
T ss_dssp EEECCEECCSSGGGGCEEEEESSC--CSSEEECT---TTCE----EEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEE
T ss_pred EEEEEEEeCCCCCCceEEEEEeCC--CCCEEEeC---CcEE----EEECCcCCCcccceEEEEEEEEECCCCCCCEEEEE
Confidence 999999999999999999999764 46999998 4566 7888999999999999999999988 578999999
Q ss_pred EEEEEEecCCCC
Q psy8629 249 VNVTIQDVNDNQ 260 (483)
Q Consensus 249 v~I~V~dvNd~~ 260 (483)
++|+|.|+||||
T Consensus 199 v~I~V~DvND~~ 210 (210)
T 3mvs_A 199 LAIIITDMQDMD 210 (210)
T ss_dssp EEEEEECCCCCC
T ss_pred EEEEEEccCCCC
Confidence 999999999975
No 19
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=6.2e-38 Score=308.83 Aligned_cols=228 Identities=21% Similarity=0.297 Sum_probs=184.8
Q ss_pred eEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccC-----CCceEEEEEEeccCCCCCCC-----CEEEEEEEEEE
Q psy8629 168 VKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHRE-----KDGVLYLDLQINGVLDRETI-----PEYSLVIEALD 237 (483)
Q Consensus 168 t~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~-----~~g~~~~~l~~~~~LD~E~~-----~~~~l~v~a~D 237 (483)
..+.++.|+|+|.+.++.+.|+|..+++...|+|....+ .+|. |.+.++||||.. ..|.|.|+|.|
T Consensus 4 ~p~~~~~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~tG~----l~~~~~LD~E~~~~~~~~~~~l~v~a~d 79 (316)
T 3ubf_A 4 RPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGA----VRVKKKWDYEELGPEKTIDFWVIITNMG 79 (316)
T ss_dssp EEEEEEEEESGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECTTSE----EEESSCCCGGGSCTTCEEEEEEEEEC--
T ss_pred CceEEEEEEecCCCCCceEEEEEEcCCCcceEEEeCCCCeEEECCCeE----EEECCccChhhcccccceEEEEEEEEcC
Confidence 456778888888888888888877655444444442110 2566 788999999984 57999999999
Q ss_pred CCCC-CeeeEEEEEEEEEecCCCCCeecCCc--eEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceE
Q psy8629 238 GGSP-PLRGSMIVNVTIQDVNDNQPIFNQSR--YFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFN 314 (483)
Q Consensus 238 ~g~p-~~~~~~~v~I~V~dvNd~~P~f~~~~--~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~ 314 (483)
++.| ++++++.|+|+|.|+|||+|.|.... |.+.|+|++++|+.|+++.|+|+|.|.+ ++|+|..
T Consensus 80 ~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~---------- 147 (316)
T 3ubf_A 80 HNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVR---------- 147 (316)
T ss_dssp -----CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEE----------
T ss_pred CCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEe----------
Confidence 8876 67999999999999999999999886 8999999999999999999999998765 7777732
Q ss_pred EeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeC
Q psy8629 315 IDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDS 394 (483)
Q Consensus 315 Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~ 394 (483)
++..++|.|++
T Consensus 148 ---------------------------------------------------------------------~~~~~~F~Id~ 158 (316)
T 3ubf_A 148 ---------------------------------------------------------------------DRTGGRFEVDE 158 (316)
T ss_dssp ---------------------------------------------------------------------EESSSCEEECT
T ss_pred ---------------------------------------------------------------------CCCCCEEEEEC
Confidence 12345788888
Q ss_pred CCcEEEEcccCCCCCCCeeEEEEEEEECCc----CCceEEEEEEEEEEecCCCCCeecCCceEEEEcCCCCCCcEEEEEE
Q psy8629 395 KSGLITMKSNVDCETDPVPKLTVIATDNGV----PALSSSATVLVTIHDVNDNEPIFDQSFYNVTIPENKPKGSCILKSI 470 (483)
Q Consensus 395 ~tG~i~~~~~lD~E~~~~y~l~V~a~D~g~----p~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~V~E~~~~g~~v~~v~ 470 (483)
.+|.|++.++||||....|.|+|+|+|+|. |+++++++++|.|.| |||+|.|.+..|.+.|+||.++|+.|++|.
T Consensus 159 ~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~ 237 (316)
T 3ubf_A 159 RSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIK 237 (316)
T ss_dssp TTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECC
T ss_pred CccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEE
Confidence 999999999999999999999999999984 468889999999999 999999999999999999999999999999
Q ss_pred EEeCCCCCCCcC
Q psy8629 471 FYDIFNISEHSF 482 (483)
Q Consensus 471 a~D~D~~~~~~~ 482 (483)
|+|+| ++.++|
T Consensus 238 A~D~D-n~~i~Y 248 (316)
T 3ubf_A 238 AKSFA-DREIRY 248 (316)
T ss_dssp EECTT-CCCEEE
T ss_pred EEeCC-CCEEEE
Confidence 99999 456666
No 20
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=8.3e-37 Score=283.23 Aligned_cols=200 Identities=27% Similarity=0.401 Sum_probs=167.6
Q ss_pred EEEEEeCCC--CCCeEEEEEEccCCC--CCCCCEEEEecCCCCCcccEEEeCCccEEEeCccCCccCCceeeEEEEecCC
Q psy8629 20 RDLEISEGV--PVGTRVGFIGDGFVG--DSGPPYLIVPVPGSAVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLSG 95 (483)
Q Consensus 20 ~~~~v~En~--~~gt~V~~v~a~d~d--~~~~~y~i~~~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d~ 95 (483)
|.+.|.||. |.|++|+++ |+|+| +..++|+|... +....|+|++.+|+|++.++||||....|.|.+.|.|+
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~gn~~i~Y~l~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 81 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSGDGNIKYILSGE---GAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDR 81 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCSSSCEEEEEEET---TBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCCCCeEEEEEECC---CCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEEC
Confidence 578999994 689999999 78977 35679999853 23458999999999999999999999999999999886
Q ss_pred cceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEE
Q psy8629 96 ENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAA 175 (483)
Q Consensus 96 ~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a 175 (483)
+... .. ..++.|.|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|
T Consensus 82 ~~~~----------------------~~--------~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A 131 (215)
T 2a4e_A 82 DTNR----------------------PL--------EPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTA 131 (215)
T ss_dssp TTCC----------------------EE--------EEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCE
T ss_pred CCCC----------------------cc--------cccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEE
Confidence 5210 00 01568999999999999999999999999999999999999999
Q ss_pred EeCCC---CCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEec-cCCCCCCCCEEEEEEEEEECCCC--CeeeEEEE
Q psy8629 176 KDRDL---GIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQIN-GVLDRETIPEYSLVIEALDGGSP--PLRGSMIV 249 (483)
Q Consensus 176 ~D~D~---~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~-~~LD~E~~~~~~l~v~a~D~g~p--~~~~~~~v 249 (483)
+|+|. |.|+.++|+|.+++ ..|.|++ .+|. |.+. ++||||....|.|.|+|+|+|.| +++++++|
T Consensus 132 ~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~---~tG~----I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v 202 (215)
T 2a4e_A 132 SDADDPTYGNSAKLVYSILEGQ--PYFSVEA---QTGI----IRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKV 202 (215)
T ss_dssp ECSSCTTTCSSSCCEEEEEEST--TTEEECT---TTCE----EEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEE
T ss_pred EECCCCCCCCceEEEEEEeCCC--CcEEEeC---CccE----EEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEE
Confidence 99997 88899999999874 5899998 4566 6777 89999999999999999999976 68999999
Q ss_pred EEEEEecCCCCCe
Q psy8629 250 NVTIQDVNDNQPI 262 (483)
Q Consensus 250 ~I~V~dvNd~~P~ 262 (483)
+|+|.|+|||+|.
T Consensus 203 ~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 203 TITLTDDYKDDDK 215 (215)
T ss_dssp EEEEEC-------
T ss_pred EEEEEECCCCCCC
Confidence 9999999999995
No 21
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=1.6e-35 Score=274.98 Aligned_cols=200 Identities=28% Similarity=0.388 Sum_probs=176.9
Q ss_pred EEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCC----CCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEE
Q psy8629 157 SIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGN----TNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLV 232 (483)
Q Consensus 157 ~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~----~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~ 232 (483)
.+.|+||++ |+.++++.+.|.|.+.|+.++|+|.+++ +.+.|.|++. +|. |.+.++||||..+.|.|+
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~l~ 77 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPI---SGQ----LSVTKPLDRELIARFHLR 77 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTT---TCE----EEECSCCCTTTCSEEEEE
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCC---ccE----EEECcccCcccCCeEEEE
Confidence 489999999 8888889999999999999999999753 3578999984 566 778899999999999999
Q ss_pred EEEEECCCCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCC--CCccEEEEEEEecCCCCC
Q psy8629 233 IEALDGGSPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADA--GSNGEVEYSINRRQSDKD 310 (483)
Q Consensus 233 v~a~D~g~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--~~~~~i~y~i~~~~~~~~ 310 (483)
|+|+|+|+|++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|. |.|+.++|+|... +.
T Consensus 78 v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~--~~- 154 (215)
T 2qvi_A 78 AHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQ--AP- 154 (215)
T ss_dssp EEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEEC--SS-
T ss_pred EEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecC--CC-
Confidence 999999999999999999999999999999999999999999999999999999999998 6777888887531 00
Q ss_pred cceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcE
Q psy8629 311 GLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWF 390 (483)
Q Consensus 311 ~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F 390 (483)
..+..+.|
T Consensus 155 ------------------------------------------------------------------------~~~~~~~F 162 (215)
T 2qvi_A 155 ------------------------------------------------------------------------STPSPNMF 162 (215)
T ss_dssp ------------------------------------------------------------------------CCSSTTCE
T ss_pred ------------------------------------------------------------------------CCCcCCeE
Confidence 01135689
Q ss_pred EEeCCCcEEEEc-ccCCCCCCCeeEEEEEEEECCcC---CceEEEEEEEEEEe
Q psy8629 391 QIDSKSGLITMK-SNVDCETDPVPKLTVIATDNGVP---ALSSSATVLVTIHD 439 (483)
Q Consensus 391 ~id~~tG~i~~~-~~lD~E~~~~y~l~V~a~D~g~p---~~s~~~~v~I~V~d 439 (483)
.|++.+|.|++. ++||||....|.|+|+|+|.|.| +++++++|.|+|+|
T Consensus 163 ~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 163 TINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp EECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 999999999985 78999999999999999999887 79999999999987
No 22
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=9.5e-35 Score=269.78 Aligned_cols=198 Identities=31% Similarity=0.443 Sum_probs=175.3
Q ss_pred EEEEeCCCC--CCeEEEEEEEEeCCCCCCceEEEEEEeC----CCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEE
Q psy8629 157 SIEFPENTP--RDVKRTLNAAKDRDLGIYNTQRYNIVSG----NTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYS 230 (483)
Q Consensus 157 ~~~V~E~~~--~gt~v~~v~a~D~D~~~~~~~~y~l~~~----~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~ 230 (483)
.+.|+||.+ .|+.++++.| |.|. |+.++|+|.++ ++.+.|.|++. +|. |.+.++||||....|.
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~ 75 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERE---TGW----LKVTQPLDREAIAKYI 75 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTT---TCE----EEECSCCCTTTCSEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECC---CCE----EEECCccCcccCceEE
Confidence 689999998 7788999999 7775 78999999974 33458999984 566 7888999999999999
Q ss_pred EEEEEEECCCCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCC---CccEEEEEEEecCC
Q psy8629 231 LVIEALDGGSPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAG---SNGEVEYSINRRQS 307 (483)
Q Consensus 231 l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~---~~~~i~y~i~~~~~ 307 (483)
|+|.|+|+++|++++++.++|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.+ .|+.++|+|...
T Consensus 76 l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~-- 153 (213)
T 3qrb_A 76 LYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQ-- 153 (213)
T ss_dssp EEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEE--
T ss_pred EEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccC--
Confidence 999999999999999999999999999999999999999999999999999999999999998 677888887431
Q ss_pred CCCcceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCC
Q psy8629 308 DKDGLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHP 387 (483)
Q Consensus 308 ~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~ 387 (483)
++ .....
T Consensus 154 ----------------------------------------------------------~~---------------~~~~~ 160 (213)
T 3qrb_A 154 ----------------------------------------------------------DP---------------ELPHK 160 (213)
T ss_dssp ----------------------------------------------------------ES---------------CCSCS
T ss_pred ----------------------------------------------------------CC---------------CCCcC
Confidence 00 01245
Q ss_pred CcEEEeCCCcEEEEc-ccCCCCCCCeeEEEEEEEECCcCCceEEEEEEEEEEe
Q psy8629 388 SWFQIDSKSGLITMK-SNVDCETDPVPKLTVIATDNGVPALSSSATVLVTIHD 439 (483)
Q Consensus 388 ~~F~id~~tG~i~~~-~~lD~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~d 439 (483)
+.|.|++.+|.|++. +.||||....|.|+|+|+|.|.|+++++++|+|+|.|
T Consensus 161 ~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 161 NMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp CSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred CeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 689999999999987 7899999999999999999999999999999999987
No 23
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=3.2e-34 Score=263.92 Aligned_cols=191 Identities=29% Similarity=0.407 Sum_probs=169.7
Q ss_pred eEEEEeCCCCCC--eEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEE
Q psy8629 156 MSIEFPENTPRD--VKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVI 233 (483)
Q Consensus 156 ~~~~V~E~~~~g--t~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v 233 (483)
..+.|+||.+.| ..++++. .|+|.|.+ +|+|.+++..+.|.|++. +|. |.+.++||||....|.|+|
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~l~v 73 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGY---DGD----IYAFERLDREKKAEYELTA 73 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETT---TTE----EEESSCCCTTTCCEEEEEE
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECC---cCE----EEECccccccccceEEEEE
Confidence 358999999988 8889998 99998875 999998877789999984 566 7889999999999999999
Q ss_pred EEEECCCC-CeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCC---CCccEEEEEEEecCCCC
Q psy8629 234 EALDGGSP-PLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADA---GSNGEVEYSINRRQSDK 309 (483)
Q Consensus 234 ~a~D~g~p-~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~ 309 (483)
.|+|+|.| ++++++.++|+|.|+|||+|.|.+..|.+.|+|+++.|+.|+++.|+|+|. |.|+.++|+|
T Consensus 74 ~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i------- 146 (203)
T 3ppe_A 74 HIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQI------- 146 (203)
T ss_dssp EEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEE-------
T ss_pred EEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEE-------
Confidence 99999987 688899999999999999999999999999999999999999999999994 4455555555
Q ss_pred CcceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCc
Q psy8629 310 DGLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSW 389 (483)
Q Consensus 310 ~~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~ 389 (483)
..+ ..+
T Consensus 147 ----------------------------------------------------------------------~~~----~~~ 152 (203)
T 3ppe_A 147 ----------------------------------------------------------------------IKG----NEY 152 (203)
T ss_dssp ----------------------------------------------------------------------EES----TTT
T ss_pred ----------------------------------------------------------------------eCC----CCc
Confidence 321 237
Q ss_pred EEEeCCCcEEEEc-ccCCCCCCCeeEEEEEEEEC-CcCCceEEEEEEEEEEe
Q psy8629 390 FQIDSKSGLITMK-SNVDCETDPVPKLTVIATDN-GVPALSSSATVLVTIHD 439 (483)
Q Consensus 390 F~id~~tG~i~~~-~~lD~E~~~~y~l~V~a~D~-g~p~~s~~~~v~I~V~d 439 (483)
|.|+ .+|.|++. ++||||....|.|+|+|+|. |.|+++++++|+|+|.|
T Consensus 153 F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 153 FTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred EEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 9999 89999998 99999999999999999998 88889999999999987
No 24
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=1.5e-34 Score=268.50 Aligned_cols=196 Identities=25% Similarity=0.327 Sum_probs=170.4
Q ss_pred EEEEeCCCC--CCeEEEEEEccCCC-CCCCCEEEEecCC-CCCcccEEEeCCccEEEeCccCCccCCceeeEEEEecCCc
Q psy8629 21 DLEISEGVP--VGTRVGFIGDGFVG-DSGPPYLIVPVPG-SAVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLSGE 96 (483)
Q Consensus 21 ~~~v~En~~--~gt~V~~v~a~d~d-~~~~~y~i~~~~~-~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d~~ 96 (483)
.++|+||++ .|+.|+++.| |.| +..+.|+|..... ....++|.|++.||.|++.++||||....|.|.+.|.|++
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 84 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSN 84 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeCC
Confidence 789999999 7899999999 765 5678999986422 2234589999999999999999999999999999988764
Q ss_pred ceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEE
Q psy8629 97 NVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAK 176 (483)
Q Consensus 97 ~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~ 176 (483)
.. ....++.|.|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+
T Consensus 85 ~~-------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~ 133 (213)
T 3qrb_A 85 GE-------------------------------AVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSAT 133 (213)
T ss_dssp SC-------------------------------BCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEE
T ss_pred CC-------------------------------cccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEE
Confidence 21 11236889999999999999999999999999999999999999999
Q ss_pred eCCCC---CCceEEEEEEeCC----CCCceEEecccCCCceEEEEEEec-cCCCCCCCCEEEEEEEEEECCCCCeeeEEE
Q psy8629 177 DRDLG---IYNTQRYNIVSGN----TNNAFRLSSHREKDGVLYLDLQIN-GVLDRETIPEYSLVIEALDGGSPPLRGSMI 248 (483)
Q Consensus 177 D~D~~---~~~~~~y~l~~~~----~~~~F~i~~~~~~~g~~~~~l~~~-~~LD~E~~~~~~l~v~a~D~g~p~~~~~~~ 248 (483)
|+|.+ .|+.++|+|.+++ ..+.|.|++. +|. |.+. ++||||....|.|.|+|+|+|.|+++++++
T Consensus 134 D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~---tG~----i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~ 206 (213)
T 3qrb_A 134 DADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRD---TGV----ISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAK 206 (213)
T ss_dssp CCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTT---TCE----EEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEE
T ss_pred eCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECC---CcE----EEEccCCCCCccCceEEEEEEEEeCCCCCceEEEE
Confidence 99998 8899999998764 3468999984 566 5665 799999999999999999999999999999
Q ss_pred EEEEEEe
Q psy8629 249 VNVTIQD 255 (483)
Q Consensus 249 v~I~V~d 255 (483)
|+|+|+|
T Consensus 207 v~I~V~D 213 (213)
T 3qrb_A 207 AVITVKD 213 (213)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999987
No 25
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=6.8e-34 Score=264.99 Aligned_cols=196 Identities=28% Similarity=0.343 Sum_probs=170.0
Q ss_pred EEEEeCCCCCC--eEEEEEEccCCCCCCCCEEEEecC-CCCCcccEEEeCCccEEEeCccCCccCCceeeEEEEecCCcc
Q psy8629 21 DLEISEGVPVG--TRVGFIGDGFVGDSGPPYLIVPVP-GSAVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLSGEN 97 (483)
Q Consensus 21 ~~~v~En~~~g--t~V~~v~a~d~d~~~~~y~i~~~~-~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d~~~ 97 (483)
.++|+||.++| +.|+++.|+|.|. .++|+|.... ...+.+.|.|++.||+|++.++||||....|.|.+.|.|++.
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~-~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~ 85 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASG 85 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT-TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSS
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc-eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCC
Confidence 68999999998 9999999999876 7899998532 223346899999999999999999999999999999988653
Q ss_pred eeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEEe
Q psy8629 98 VRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKD 177 (483)
Q Consensus 98 ~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D 177 (483)
... ..++.|.|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|
T Consensus 86 ~~~-------------------------------~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D 134 (218)
T 3k5r_A 86 KTL-------------------------------EGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFD 134 (218)
T ss_dssp CEE-------------------------------EEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSC
T ss_pred Cce-------------------------------eeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEe
Confidence 110 0257899999999999999999999999999999999999999999
Q ss_pred CCC--CCCceEEEEEEeCCCC----CceEEecccCCCceEEEEEEec---cCCCCCC--CCEEEEEEEEEECC--CCCee
Q psy8629 178 RDL--GIYNTQRYNIVSGNTN----NAFRLSSHREKDGVLYLDLQIN---GVLDRET--IPEYSLVIEALDGG--SPPLR 244 (483)
Q Consensus 178 ~D~--~~~~~~~y~l~~~~~~----~~F~i~~~~~~~g~~~~~l~~~---~~LD~E~--~~~~~l~v~a~D~g--~p~~~ 244 (483)
+|. +.|+.++|+|.++++. +.|.|++ .+|. |.+. ++||||. .+.|.|.|+|+|+| .|+++
T Consensus 135 ~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~---~tG~----i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~s 207 (218)
T 3k5r_A 135 ADDPATDNALLRYNIRQQTPDKPSPNMFYIDP---EKGD----IVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLT 207 (218)
T ss_dssp SSSSCGGGGCEEEEEEEEESCCSCSCSEEECT---TTCE----EEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCE
T ss_pred CCCCCCCCcEEEEEEecCCCCCCcCCEEEEEC---CccE----EEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCee
Confidence 999 6799999999986543 6799998 4566 4444 7999999 77999999999999 88999
Q ss_pred eEEEEEEEEEe
Q psy8629 245 GSMIVNVTIQD 255 (483)
Q Consensus 245 ~~~~v~I~V~d 255 (483)
++++|+|+|.|
T Consensus 208 st~~v~I~V~D 218 (218)
T 3k5r_A 208 GTATATIVIDD 218 (218)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEEEC
Confidence 99999999987
No 26
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=4.7e-34 Score=266.04 Aligned_cols=197 Identities=30% Similarity=0.487 Sum_probs=173.1
Q ss_pred EEEEeCCCCCC--eEEEEEEEEeCCCCCCceEEEEEEeC----CCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEE
Q psy8629 157 SIEFPENTPRD--VKRTLNAAKDRDLGIYNTQRYNIVSG----NTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYS 230 (483)
Q Consensus 157 ~~~V~E~~~~g--t~v~~v~a~D~D~~~~~~~~y~l~~~----~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~ 230 (483)
.+.|+||.+.| +.++++.|.|+|. .++|+|.++ ++.+.|.|++. +|. |.+.++||||....|.
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~ 75 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINEN---TGS----VSVTRTLDRETIATYQ 75 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTT---TCE----EEECSCCCTTTCSEEE
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCC---ceE----EEECCcCCcccCCEEE
Confidence 58999999998 8899999998875 689999863 34589999984 566 7888999999999999
Q ss_pred EEEEEEECCCCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCC--CCccEEEEEEEecCCC
Q psy8629 231 LVIEALDGGSPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADA--GSNGEVEYSINRRQSD 308 (483)
Q Consensus 231 l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~--~~~~~i~y~i~~~~~~ 308 (483)
|+|.|+|+|+|++++++.|+|+|.|+|||+|.|.+..|.+.|+|+++.|+.|+++.|+|+|. |.|+.++|+|....
T Consensus 76 l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~-- 153 (218)
T 3k5r_A 76 LYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQT-- 153 (218)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEE--
T ss_pred EEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCC--
Confidence 99999999999999999999999999999999999999999999999999999999999998 67888888885310
Q ss_pred CCcceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCC
Q psy8629 309 KDGLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPS 388 (483)
Q Consensus 309 ~~~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~ 388 (483)
+ .....+
T Consensus 154 ----------------------------------------------------------~---------------~~~~~~ 160 (218)
T 3k5r_A 154 ----------------------------------------------------------P---------------DKPSPN 160 (218)
T ss_dssp ----------------------------------------------------------S---------------CCSCSC
T ss_pred ----------------------------------------------------------C---------------CCCcCC
Confidence 0 011246
Q ss_pred cEEEeCCCcEEEEc---ccCCCCC--CCeeEEEEEEEECC--cCCceEEEEEEEEEEe
Q psy8629 389 WFQIDSKSGLITMK---SNVDCET--DPVPKLTVIATDNG--VPALSSSATVLVTIHD 439 (483)
Q Consensus 389 ~F~id~~tG~i~~~---~~lD~E~--~~~y~l~V~a~D~g--~p~~s~~~~v~I~V~d 439 (483)
+|.|++.+|.|++. +.||||. .+.|.|+|+|+|.| .|+++++++|+|+|.|
T Consensus 161 ~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 161 MFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp SEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred EEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 79999999999877 6999999 77999999999999 8899999999999987
No 27
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=5.7e-35 Score=269.94 Aligned_cols=193 Identities=33% Similarity=0.468 Sum_probs=163.5
Q ss_pred EEEEeCCCCCC--eEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEEE
Q psy8629 157 SIEFPENTPRD--VKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVIE 234 (483)
Q Consensus 157 ~~~V~E~~~~g--t~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v~ 234 (483)
.+.|+|+.+.+ +.++++ |+|+|.| ++.++|+|.+++....|.|++. +|. |.+.++||||....|.|+|.
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~l~v~ 76 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAGDLFIINEN---TGD----IQATKRLDREEKPVYILRAQ 76 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBTTTEEECTT---TCE----EEECSCCCGGGCCEEEC---
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCCCeEEEECC---ceE----EEECCCcCcccCCEEEEEEE
Confidence 47899998855 588888 8999998 6789999987666679999984 566 78889999999999999999
Q ss_pred EEECC-CCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCC---CCccEEEEEEEecCCCCC
Q psy8629 235 ALDGG-SPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADA---GSNGEVEYSINRRQSDKD 310 (483)
Q Consensus 235 a~D~g-~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~ 310 (483)
|+|++ .|++++++.++|+|.|+|||+|.|.+..|.+.|+|+++.|+.|+++.|+|+|. |.|+.++|+|
T Consensus 77 a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i-------- 148 (207)
T 3lnd_A 77 AVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSI-------- 148 (207)
T ss_dssp -CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEE--------
T ss_pred EEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEE--------
Confidence 99987 57889999999999999999999999999999999999999999999999997 5555555555
Q ss_pred cceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcE
Q psy8629 311 GLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWF 390 (483)
Q Consensus 311 ~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F 390 (483)
.. ...+|
T Consensus 149 ---------------------------------------------------------------------~~----~~~~F 155 (207)
T 3lnd_A 149 ---------------------------------------------------------------------LQ----GQPYF 155 (207)
T ss_dssp ---------------------------------------------------------------------EE----SGGGE
T ss_pred ---------------------------------------------------------------------cC----CCCCE
Confidence 31 12378
Q ss_pred EEeCCCcEEEEc-ccCCCCCCCeeEEEEEEEECCcC--CceEEEEEEEEEEe
Q psy8629 391 QIDSKSGLITMK-SNVDCETDPVPKLTVIATDNGVP--ALSSSATVLVTIHD 439 (483)
Q Consensus 391 ~id~~tG~i~~~-~~lD~E~~~~y~l~V~a~D~g~p--~~s~~~~v~I~V~d 439 (483)
.|++.+|.|++. +.||||....|.|+|+|+|.|.| +++++++|+|+|.|
T Consensus 156 ~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 156 SVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp EECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 899899999998 89999999999999999999877 79999999999987
No 28
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=4.2e-34 Score=265.36 Aligned_cols=196 Identities=23% Similarity=0.301 Sum_probs=167.4
Q ss_pred EEEEeCCCCCCeEEEEEEccCCC---CCCCCEEEEecCC-CCCcccEEEeCCccEEEeCccCCccCCceeeEEEEecCCc
Q psy8629 21 DLEISEGVPVGTRVGFIGDGFVG---DSGPPYLIVPVPG-SAVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLSGE 96 (483)
Q Consensus 21 ~~~v~En~~~gt~V~~v~a~d~d---~~~~~y~i~~~~~-~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d~~ 96 (483)
.++|+||++ |+.++++.+.|.| +..++|+|..... ......|.|++.||.|+++++||||....|.|.+.|.|++
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 678999999 8888888776644 5568999985421 1234689999999999999999999999999999998865
Q ss_pred ceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEE
Q psy8629 97 NVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAK 176 (483)
Q Consensus 97 ~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~ 176 (483)
... ...++.|.|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+
T Consensus 85 ~~~-------------------------------~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~ 133 (215)
T 2qvi_A 85 GNQ-------------------------------VENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAI 133 (215)
T ss_dssp TCC-------------------------------CEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCB
T ss_pred CCc-------------------------------eeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEE
Confidence 310 0125789999999999999999999999999999999999999999
Q ss_pred eCCC--CCCceEEEEEEeCC----CCCceEEecccCCCceEEEEEEe-ccCCCCCCCCEEEEEEEEEECCCC---CeeeE
Q psy8629 177 DRDL--GIYNTQRYNIVSGN----TNNAFRLSSHREKDGVLYLDLQI-NGVLDRETIPEYSLVIEALDGGSP---PLRGS 246 (483)
Q Consensus 177 D~D~--~~~~~~~y~l~~~~----~~~~F~i~~~~~~~g~~~~~l~~-~~~LD~E~~~~~~l~v~a~D~g~p---~~~~~ 246 (483)
|+|. |.|+.++|+|.+++ ....|.|++. +|. |.+ .++||||....|.|.|+|+|+|+| +++++
T Consensus 134 D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~---tG~----i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t 206 (215)
T 2qvi_A 134 DADDPNALNGMLRYRILSQAPSTPSPNMFTINNE---TGD----IITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNT 206 (215)
T ss_dssp CSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTT---TCE----EEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCE
T ss_pred eCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCC---CcE----EEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceE
Confidence 9998 78999999999876 3579999984 566 556 479999999999999999999887 79999
Q ss_pred EEEEEEEEe
Q psy8629 247 MIVNVTIQD 255 (483)
Q Consensus 247 ~~v~I~V~d 255 (483)
++|+|+|+|
T Consensus 207 ~~v~I~V~D 215 (215)
T 2qvi_A 207 ATAVITVTD 215 (215)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEEC
Confidence 999999986
No 29
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=3.2e-33 Score=257.19 Aligned_cols=191 Identities=27% Similarity=0.400 Sum_probs=166.4
Q ss_pred EEEEeCCCCCC--eEEEEEEccCCCCCCCCEEEEecCCCCCcccEEEeCCccEEEeCccCCccCCceeeEEEEecCCcce
Q psy8629 21 DLEISEGVPVG--TRVGFIGDGFVGDSGPPYLIVPVPGSAVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLSGENV 98 (483)
Q Consensus 21 ~~~v~En~~~g--t~V~~v~a~d~d~~~~~y~i~~~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d~~~~ 98 (483)
.++|+||.+.| +.|+++. .|.|....+|+|... +...+|.|++.||.|+++++||||....|.|.+.|.|++..
T Consensus 6 ~~~V~En~~~~~~~~v~~v~-~D~D~g~~~Y~i~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~ 81 (203)
T 3ppe_A 6 RMHIREEIDSPLPHHVGKLT-SSVGNKNAMYIIEGE---SANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNN 81 (203)
T ss_dssp EEEEETTCCSSSCEEEEECC-BCCCCTTEEEEEEET---TBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTT
T ss_pred cEEEEccCCCCCCEEEEEEE-ecCCCCCcEEEEecC---CCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCC
Confidence 58999999998 9999998 887633339999854 33458999999999999999999999999999999887531
Q ss_pred eEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEEeC
Q psy8629 99 RVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDR 178 (483)
Q Consensus 99 ~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~ 178 (483)
. ....++.+.|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+
T Consensus 82 ~------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~ 131 (203)
T 3ppe_A 82 R------------------------------SLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDA 131 (203)
T ss_dssp E------------------------------ECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECC
T ss_pred C------------------------------cccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcC
Confidence 0 0123678999999999999999999999999999999999999999999
Q ss_pred C---CCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEec-cCCCCCCCCEEEEEEEEEEC-CCCCeeeEEEEEEEE
Q psy8629 179 D---LGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQIN-GVLDRETIPEYSLVIEALDG-GSPPLRGSMIVNVTI 253 (483)
Q Consensus 179 D---~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~-~~LD~E~~~~~~l~v~a~D~-g~p~~~~~~~v~I~V 253 (483)
| .|.|+.++|+|.+++ ..|.|+ . +|. |.+. ++||||....|.|.|+|+|+ |.|+++++++|+|+|
T Consensus 132 D~~~~g~n~~i~Y~i~~~~--~~F~I~-~---tG~----i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V 201 (203)
T 3ppe_A 132 DDPTVAGHATVTYQIIKGN--EYFTVD-D---SGV----IFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRL 201 (203)
T ss_dssp SCTTSSSTTCEEEEEEEST--TTEEEC-T---TSE----EEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEE
T ss_pred CCcCCCCceEEEEEEeCCC--CcEEEe-C---CeE----EEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEE
Confidence 9 478999999999875 499999 4 466 7777 99999999999999999998 778899999999999
Q ss_pred Ee
Q psy8629 254 QD 255 (483)
Q Consensus 254 ~d 255 (483)
+|
T Consensus 202 ~D 203 (203)
T 3ppe_A 202 TD 203 (203)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 30
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=1.9e-33 Score=259.71 Aligned_cols=192 Identities=26% Similarity=0.361 Sum_probs=160.1
Q ss_pred EEEEeCCCCCC--eEEEEEEccCCC--CCCCCEEEEecCCCCCcccEEEeCCccEEEeCccCCccCCceeeEEEEecCCc
Q psy8629 21 DLEISEGVPVG--TRVGFIGDGFVG--DSGPPYLIVPVPGSAVDTDLSIEQNTGEIRTKVPLDRETRSSYSLVAIPLSGE 96 (483)
Q Consensus 21 ~~~v~En~~~g--t~V~~v~a~d~d--~~~~~y~i~~~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~d~~ 96 (483)
.++|+||.++| +.|+++ |+|+| +..+.|+|... +...+|.|++.+|+|+++++||||....|.|.+.|.|++
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g~~~i~Y~l~~~---~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 81 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRGDGSLKYILSGD---GAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRR 81 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCSSTTBCCCCCSS---SBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSS
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCCCceEEEEEECC---CCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECC
Confidence 57899999955 589999 89977 45688998743 334589999999999999999999999999999998864
Q ss_pred ceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEE
Q psy8629 97 NVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAK 176 (483)
Q Consensus 97 ~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~ 176 (483)
.. +....++.+.|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+
T Consensus 82 ~~------------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~ 131 (207)
T 3lnd_A 82 TG------------------------------RPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTAT 131 (207)
T ss_dssp SC------------------------------CCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEE
T ss_pred CC------------------------------CccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEE
Confidence 20 011235678999999999999999999999999999999999999999
Q ss_pred eCCC---CCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEec-cCCCCCCCCEEEEEEEEEECCCC--CeeeEEEEE
Q psy8629 177 DRDL---GIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQIN-GVLDRETIPEYSLVIEALDGGSP--PLRGSMIVN 250 (483)
Q Consensus 177 D~D~---~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~-~~LD~E~~~~~~l~v~a~D~g~p--~~~~~~~v~ 250 (483)
|+|. |.|+.++|+|.+++ ..|.|++. +|. |.+. ++||||....|.|.|+|+|+|.| +++++++|+
T Consensus 132 D~D~~~~g~n~~i~Y~i~~~~--~~F~Id~~---tG~----i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~ 202 (207)
T 3lnd_A 132 DADDPTYGNSAKVVYSILQGQ--PYFSVESE---TGI----IKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVN 202 (207)
T ss_dssp CSSCTTSSSTTCCEEEEEESG--GGEEECTT---TCE----EEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEE
T ss_pred eCCCCCCCCCcEEEEEEcCCC--CCEEEcCC---CcE----EEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEE
Confidence 9998 78899999999864 48999984 566 6677 89999999999999999999876 799999999
Q ss_pred EEEEe
Q psy8629 251 VTIQD 255 (483)
Q Consensus 251 I~V~d 255 (483)
|+|.|
T Consensus 203 I~V~D 207 (207)
T 3lnd_A 203 ITLTD 207 (207)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99987
No 31
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=7.5e-30 Score=240.17 Aligned_cols=206 Identities=23% Similarity=0.297 Sum_probs=162.0
Q ss_pred CceEEEEeCCCCCCeEEEEE-EEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEE
Q psy8629 154 PFMSIEFPENTPRDVKRTLN-AAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLV 232 (483)
Q Consensus 154 ~~~~~~V~E~~~~gt~v~~v-~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~ 232 (483)
+.+.+.|+|+++.|+.+..+ .+.|.|.+.++.++|+|.++ ....|.|++. +|.+++ ....+.||||....|.+.
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~-~~~~f~id~~---tg~~~l-~~t~~~LDrE~~~~~~~~ 94 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDN-VDYWVLLDPV---KQMLFL-NSTGRVLDRDPPMNIHSI 94 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESC-GGGCEEEETT---TTEEEE-CCTTSCCCCSTTTCCCEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecC-CCceEEECCC---CCEEEE-EecCCceeccCCCceEEE
Confidence 35778999999999998765 44555667888999999754 3568999984 566442 223578999998766655
Q ss_pred EEEEECCC--CCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEE-----EEEEeCCCCCccEEEEEEEec
Q psy8629 233 IEALDGGS--PPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQ-----VFATDADAGSNGEVEYSINRR 305 (483)
Q Consensus 233 v~a~D~g~--p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~-----v~a~D~D~~~~~~i~y~i~~~ 305 (483)
+.+.+++. ++..+.+.|+|.|.|+|||+|.|.+..|.+.|+||+++|+.|++ +.|+|+|.|.|+.|+|+|...
T Consensus 95 ~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~ 174 (242)
T 4apx_B 95 VVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYN 174 (242)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECC
T ss_pred EEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecC
Confidence 55444322 23567788999999999999999999999999999999999986 779999988888888888531
Q ss_pred CCCCCcceEEeCCccEEEEcccCCCcccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCC
Q psy8629 306 QSDKDGLFNIDSKSGLIFVNKALDFETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDD 385 (483)
Q Consensus 306 ~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~ 385 (483)
+. .+.
T Consensus 175 --~~-------------------------------------------------------------------------~~~ 179 (242)
T 4apx_B 175 --PE-------------------------------------------------------------------------DPT 179 (242)
T ss_dssp --TT-------------------------------------------------------------------------STT
T ss_pred --CC-------------------------------------------------------------------------Ccc
Confidence 00 011
Q ss_pred CCCcEEEeC-CCcEEEEcccCCCCCCCeeEEEEEEEECCcCC---ceEEEEEEEEEEe
Q psy8629 386 HPSWFQIDS-KSGLITMKSNVDCETDPVPKLTVIATDNGVPA---LSSSATVLVTIHD 439 (483)
Q Consensus 386 ~~~~F~id~-~tG~i~~~~~lD~E~~~~y~l~V~a~D~g~p~---~s~~~~v~I~V~d 439 (483)
....|.|++ .+|.|++.+.||||....|.|+|+|+|+|.|+ ++++++|+|.|.-
T Consensus 180 ~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 180 SNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp HHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred cccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 234688884 58999999999999999999999999999884 7888999998874
No 32
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=1e-28 Score=232.38 Aligned_cols=196 Identities=20% Similarity=0.157 Sum_probs=158.6
Q ss_pred ceEEEEEeCCCCCCeEEEEEEccC---CC-CCCCCEEEEecCCCCCcccEEEeCCccEEEeC---ccCCccCCceeeEEE
Q psy8629 18 HLRDLEISEGVPVGTRVGFIGDGF---VG-DSGPPYLIVPVPGSAVDTDLSIEQNTGEIRTK---VPLDRETRSSYSLVA 90 (483)
Q Consensus 18 ~~~~~~v~En~~~gt~V~~v~a~d---~d-~~~~~y~i~~~~~~~~~~~F~Id~~tG~i~~~---~~LD~E~~~~y~l~v 90 (483)
+.|.++|+|++|+|++|..+.+.+ .+ +..+.|+|... ...+|.|++.+|.+++. +.||||....|.+.+
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~----~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~ 95 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDN----VDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIV 95 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESC----GGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecC----CCceEEECCCCCEEEEEecCCceeccCCCceEEEE
Confidence 468899999999999998755544 23 33467888742 34589999999999875 579999988877665
Q ss_pred EecCCcceeEEEeecCcEEEEcccCCccccceEEEEEEeCC-CC--eEEEEEEEecCCCCCCccCCCceEEEEeCCCCCC
Q psy8629 91 IPLSGENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLS-GE--NVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRD 167 (483)
Q Consensus 91 ~a~d~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~-~~--~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~g 167 (483)
.+.++. ... +. .+.|.|.|.|+|||+|.|.+..|.+.|+|++++|
T Consensus 96 ~~v~~~--------------------------------~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~G 143 (242)
T 4apx_B 96 VQVQCV--------------------------------NKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVG 143 (242)
T ss_dssp EEEEEE--------------------------------ETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTT
T ss_pred EEEEeE--------------------------------CCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCC
Confidence 443321 111 11 4579999999999999999999999999999999
Q ss_pred eEEEE-----EEEEeCCCCCCceEEEEEEeCCCC----CceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEEEEEEC
Q psy8629 168 VKRTL-----NAAKDRDLGIYNTQRYNIVSGNTN----NAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVIEALDG 238 (483)
Q Consensus 168 t~v~~-----v~a~D~D~~~~~~~~y~l~~~~~~----~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v~a~D~ 238 (483)
+.|.+ +.|+|+|.|.|+.++|+|..++.. ..|.|+.. .+|. |.+.++||||....|.|.|+|+|+
T Consensus 144 t~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~--~tG~----i~~~~~LD~E~~~~y~l~V~A~D~ 217 (242)
T 4apx_B 144 TTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLM--LTGN----VVLRKRLNYEDKTRYYVIIQANDR 217 (242)
T ss_dssp CEEECTTTTTTSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSST--TTCC----EEECSCCCTTTCCEEEEEEEEEEC
T ss_pred CEEEEeeecccccccCCCCcCCceEEEEecCCCCcccccceEEcCC--CceE----EEECCcCChhhCCEEEEEEEEEEC
Confidence 99976 789999999999999999986543 36999853 3566 778999999999999999999999
Q ss_pred CCCC---eeeEEEEEEEEEe
Q psy8629 239 GSPP---LRGSMIVNVTIQD 255 (483)
Q Consensus 239 g~p~---~~~~~~v~I~V~d 255 (483)
|.|+ +++.+.|+|+|..
T Consensus 218 G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 218 AQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp CSSGGGCCEEEEEEEEEEEC
T ss_pred CcCchhcccCCceEEEEEee
Confidence 9884 7788899998874
No 33
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=3.3e-27 Score=197.97 Aligned_cols=116 Identities=27% Similarity=0.401 Sum_probs=107.7
Q ss_pred EEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCCC--CCceEEecccCCCceEEEEEE
Q psy8629 139 VRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGNT--NNAFRLSSHREKDGVLYLDLQ 216 (483)
Q Consensus 139 I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~--~~~F~i~~~~~~~g~~~~~l~ 216 (483)
++|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.|.|+.++|+|.++.. ...|.|++. +|. |.
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~---tG~----I~ 74 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDET---SGW----LS 74 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTT---TCE----EE
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCC---ceE----EE
Confidence 468999999999999999999999999999999999999999999999999987543 358999984 566 77
Q ss_pred eccCCCCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEecCCCCC
Q psy8629 217 INGVLDRETIPEYSLVIEALDGGSPPLRGSMIVNVTIQDVNDNQP 261 (483)
Q Consensus 217 ~~~~LD~E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P 261 (483)
+.++||||....|.|.|+|+|+|.|++++++.|+|+|.|+|||+|
T Consensus 75 ~~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 75 VLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp ECSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred ECccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 899999999999999999999999999999999999999999998
No 34
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.93 E-value=3e-26 Score=192.15 Aligned_cols=118 Identities=36% Similarity=0.548 Sum_probs=106.0
Q ss_pred EEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeCCccEEEEcccCCC
Q psy8629 251 VTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDSKSGLIFVNKALDF 330 (483)
Q Consensus 251 I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~~tG~l~~~~~LD~ 330 (483)
++|.|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|.|.++.++|+|...
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~------------------------- 56 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAA------------------------- 56 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSC-------------------------
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecC-------------------------
Confidence 4689999999999999999999999999999999999999998888888887320
Q ss_pred cccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCC
Q psy8629 331 ETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETD 410 (483)
Q Consensus 331 E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~ 410 (483)
......+|.|++.+|.|++.+.||||..
T Consensus 57 ----------------------------------------------------~~~~~~~F~Id~~tG~I~~~~~LD~E~~ 84 (119)
T 2yst_A 57 ----------------------------------------------------TESVRRLLRLDETSGWLSVLHRIDREEV 84 (119)
T ss_dssp ----------------------------------------------------CTTHHHHEEECTTTCEEEECSCCCTTTC
T ss_pred ----------------------------------------------------CCccccEEEEeCCceEEEECccCCcccC
Confidence 0112357999999999999999999999
Q ss_pred CeeEEEEEEEECCcCCceEEEEEEEEEEecCCCCC
Q psy8629 411 PVPKLTVIATDNGVPALSSSATVLVTIHDVNDNEP 445 (483)
Q Consensus 411 ~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd~~P 445 (483)
..|.|+|+|+|+|.|+++++++|+|+|.|+|||+|
T Consensus 85 ~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 85 NQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp SEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred CEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 99999999999999999999999999999999998
No 35
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=9.1e-25 Score=181.44 Aligned_cols=110 Identities=29% Similarity=0.431 Sum_probs=100.3
Q ss_pred EEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeC---CCCCceEEecccCCCceEEEEE
Q psy8629 139 VRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSG---NTNNAFRLSSHREKDGVLYLDL 215 (483)
Q Consensus 139 I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~---~~~~~F~i~~~~~~~g~~~~~l 215 (483)
|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.|.|+.++|+|.++ +....|.|++. +|. |
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~---tG~----I 74 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNT---TGL----I 74 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTT---TCE----E
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCC---eeE----E
Confidence 5789999999999999999999999999999999999999999999999999763 23568999984 566 7
Q ss_pred EeccCCCCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEecC
Q psy8629 216 QINGVLDRETIPEYSLVIEALDGGSPPLRGSMIVNVTIQDVN 257 (483)
Q Consensus 216 ~~~~~LD~E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~dvN 257 (483)
.+.++||||....|.|.|+|+|+|.|+ ++++|+|+|+|+|
T Consensus 75 ~~~~~LD~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 75 TVQRSLDREETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp EECSCCCTTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred EECccCCcccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 788999999999999999999999876 7889999999997
No 36
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=1.8e-23 Score=173.52 Aligned_cols=113 Identities=37% Similarity=0.594 Sum_probs=100.1
Q ss_pred EEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeCCccEEEEcccCCC
Q psy8629 251 VTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDSKSGLIFVNKALDF 330 (483)
Q Consensus 251 I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~~tG~l~~~~~LD~ 330 (483)
|+|.|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|.|.++.++|+|... .
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~--~---------------------- 57 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQ--V---------------------- 57 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSS--C----------------------
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccC--C----------------------
Confidence 5689999999999999999999999999999999999999998888888888420 0
Q ss_pred cccceeeeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCC
Q psy8629 331 ETKEVHDLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETD 410 (483)
Q Consensus 331 E~~~~~~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~ 410 (483)
+++...+|.|++.+|.|++.++||||..
T Consensus 58 ----------------------------------------------------~~~~~~~F~Id~~tG~I~~~~~LD~E~~ 85 (114)
T 2ee0_A 58 ----------------------------------------------------APATKRLFALNNTTGLITVQRSLDREET 85 (114)
T ss_dssp ----------------------------------------------------CHHHHHHEEECTTTCEEEECSCCCTTTC
T ss_pred ----------------------------------------------------CCCccceEEEeCCeeEEEECccCCcccC
Confidence 0123467999999999999999999999
Q ss_pred CeeEEEEEEEECCcCCceEEEEEEEEEEecC
Q psy8629 411 PVPKLTVIATDNGVPALSSSATVLVTIHDVN 441 (483)
Q Consensus 411 ~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvN 441 (483)
..|.|+|+|+|+|.|+ ++++|+|+|.|+|
T Consensus 86 ~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 86 AIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp SEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred cEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 9999999999999876 7899999999998
No 37
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=5.2e-22 Score=166.93 Aligned_cols=114 Identities=19% Similarity=0.275 Sum_probs=104.2
Q ss_pred CCCCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeC----CCCCceEEecccCCCceEEEEEEecc
Q psy8629 144 ENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSG----NTNNAFRLSSHREKDGVLYLDLQING 219 (483)
Q Consensus 144 vND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~----~~~~~F~i~~~~~~~g~~~~~l~~~~ 219 (483)
.+.+.|.|....|.+.+.|++++|+.|+++. .|+|.|.|+.++|+|.++ +....|.|++. +|. |.+.+
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~---tG~----i~~~~ 76 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKD---TGE----LNVTS 76 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETT---TTE----EEECS
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCC---cCE----EEECc
Confidence 4688999999999999999999999999999 699999999999999976 24578999984 566 78899
Q ss_pred CCCCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEecCCCCCeecC
Q psy8629 220 VLDRETIPEYSLVIEALDGGSPPLRGSMIVNVTIQDVNDNQPIFNQ 265 (483)
Q Consensus 220 ~LD~E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P~f~~ 265 (483)
+||||..+.|.|+|.|+|+|.|++++++.|+|+|+|+|||+|.|.+
T Consensus 77 ~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 77 ILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp CCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred ccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 9999999999999999999999999999999999999999999975
No 38
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=2.3e-21 Score=163.03 Aligned_cols=118 Identities=19% Similarity=0.268 Sum_probs=100.8
Q ss_pred CCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEecCCCCCcceEEeCCccEEEEcccCCCccccee
Q psy8629 257 NDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRRQSDKDGLFNIDSKSGLIFVNKALDFETKEVH 336 (483)
Q Consensus 257 Nd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~~~F~Id~~tG~l~~~~~LD~E~~~~~ 336 (483)
+.+.|.|....|.+.+.|++++|+.|+++. +|+|.|.|+.|+|+|.....
T Consensus 6 ~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~----------------------------- 55 (123)
T 2yqg_A 6 SGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGI----------------------------- 55 (123)
T ss_dssp SCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTT-----------------------------
T ss_pred cccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCC-----------------------------
Confidence 578899998888888888889999999988 58888777778888743100
Q ss_pred eeEeEEEEEeeeeeccCCCCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEE
Q psy8629 337 DLVPRFAVEISSFDEIAEPGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETDPVPKLT 416 (483)
Q Consensus 337 ~l~v~~~~~v~~v~E~~~~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~ 416 (483)
..+....|.|++.+|.|++.++||||....|.|+
T Consensus 56 ----------------------------------------------~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~ 89 (123)
T 2yqg_A 56 ----------------------------------------------TEPPFGIFVFNKDTGELNVTSILDREETPFFLLT 89 (123)
T ss_dssp ----------------------------------------------TBSSCSSEEEETTTTEEEECSCCBTTTBSEEEEE
T ss_pred ----------------------------------------------CCCcCCCEEEeCCcCEEEECcccCcccCceEEEE
Confidence 0123467999999999999999999999999999
Q ss_pred EEEEECCcCCceEEEEEEEEEEecCCCCCeecCC
Q psy8629 417 VIATDNGVPALSSSATVLVTIHDVNDNEPIFDQS 450 (483)
Q Consensus 417 V~a~D~g~p~~s~~~~v~I~V~dvNd~~P~f~~~ 450 (483)
|+|+|.|.|+++++++|.|.|.|+|||+|.|.++
T Consensus 90 V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 90 GYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp EEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred EEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 9999999999999999999999999999999763
No 39
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.82 E-value=2.2e-20 Score=153.82 Aligned_cols=97 Identities=21% Similarity=0.276 Sum_probs=78.3
Q ss_pred eeeccCCCCeE--EEEEEEEeCCCCCCceEEEEEeeCC--CCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEECC
Q psy8629 348 SFDEIAEPGTS--VFQISAFDQDEGINSVITYSLRENT--DDHPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATDNG 423 (483)
Q Consensus 348 ~v~E~~~~gt~--v~~v~a~D~D~~~~~~v~y~l~~~~--~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g 423 (483)
+|.||+++|+. |+++ |.|.|.|+.++|+|.... ++..+.|.|++.+|.|++.++||||..+.|.|+|+|+|.|
T Consensus 10 ~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g 86 (110)
T 1ncg_A 10 NLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 86 (110)
T ss_dssp EECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTT
T ss_pred EEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEEECC
Confidence 57899999994 5555 677778999999998531 2457899999999999999999999999999999999999
Q ss_pred cCCceEEEEEEEEEEecCCCCCee
Q psy8629 424 VPALSSSATVLVTIHDVNDNEPIF 447 (483)
Q Consensus 424 ~p~~s~~~~v~I~V~dvNd~~P~f 447 (483)
.|+++++++|.|+|.|+|||+|.|
T Consensus 87 ~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 87 GNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp SCBCSCCEEEEEEEC---------
T ss_pred CCceeeEEEEEEEEEECCCCCCCC
Confidence 999999999999999999999987
No 40
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.80 E-value=1.2e-19 Score=149.32 Aligned_cols=99 Identities=23% Similarity=0.355 Sum_probs=78.6
Q ss_pred ceEEEEeCCCCCCeE--EEEEEEEeCCCCCCceEEEEEEeC----CCCCceEEecccCCCceEEEEEEeccCCCCCCCCE
Q psy8629 155 FMSIEFPENTPRDVK--RTLNAAKDRDLGIYNTQRYNIVSG----NTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPE 228 (483)
Q Consensus 155 ~~~~~V~E~~~~gt~--v~~v~a~D~D~~~~~~~~y~l~~~----~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~ 228 (483)
.|.++|+||+++|+. ++++ |.|.|.|+.++|+|.++ +..+.|.|++. +|. |.+.++||||..+.
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~ 75 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPI---SGQ----LSVTKPLDRELIAR 75 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTT---TCE----EEECSCCCTTTCCE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECC---CCE----EEECCcCCcccCCe
Confidence 367999999999995 5554 77888899999999863 34679999984 566 78899999999999
Q ss_pred EEEEEEEEECCCCCeeeEEEEEEEEEecCCCCCee
Q psy8629 229 YSLVIEALDGGSPPLRGSMIVNVTIQDVNDNQPIF 263 (483)
Q Consensus 229 ~~l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P~f 263 (483)
|.|.|.|+|+|.|++++++.|+|+|+|+|||+|.|
T Consensus 76 y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 76 FHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 99999999999999999999999999999999987
No 41
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=5e-20 Score=154.88 Aligned_cols=110 Identities=23% Similarity=0.179 Sum_probs=88.9
Q ss_pred HhhhcCceEEEEEeCCCCCCeEEEEEEccCCCCC--CC---CEEEEecCCCCCcccEEEeCCccEEEeCccCCccCC---
Q psy8629 12 AVAADEHLRDLEISEGVPVGTRVGFIGDGFVGDS--GP---PYLIVPVPGSAVDTDLSIEQNTGEIRTKVPLDRETR--- 83 (483)
Q Consensus 12 ~~~~~~~~~~~~v~En~~~gt~V~~v~a~d~d~~--~~---~y~i~~~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~--- 83 (483)
+|.+...+|.++|+||+++|+.|+++ |+|.|.. .+ .|+|.++ +...+|.||+.||.|+++++||||+.
T Consensus 5 ~~~~~~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y~i~~~---~~~~~F~Id~~tG~i~~~~~LDRE~~c~~ 80 (125)
T 1wyj_A 5 SSGAGSATITYSVLEETDRGSLVGNL-AKDLGLSLRELITRGAQILSK---GNKQLLQLEQKSGNLLLKEKLDREELCGS 80 (125)
T ss_dssp CCCCCCCCCCEEECSSCCTTCEEEES-TTTTTCCHHHHHHTTCEEECS---SSSCSEEECSSSSEEEESSCCCSTTTCTT
T ss_pred EecccCceEEEEEECCCCCCCEEEEE-EecCCCCCCceeeEEEEEecC---CCCCeEEEECCccEEEECccccchhhccc
Confidence 34567788899999999999999999 9997743 23 8999864 23458999999999999999999999
Q ss_pred -ceeeEEEEecCCcceeEEEeecCcEEEEcccCCccccceEEEEEEeCCCCeEEEEEEEecCCCCCCccCCCceEEE
Q psy8629 84 -SSYSLVAIPLSGENVRVVSFYEPGEIRTKVPLDRETRSSYSLVAIPLSGENVRVVVRVIDENDNAPTFPSPFMSIE 159 (483)
Q Consensus 84 -~~y~l~v~a~d~~~~~~~~~~~~g~l~~~~~ld~e~~~~~~~~~~~~~~~~~~v~I~V~DvND~~P~f~~~~~~~~ 159 (483)
..|.|.+.|.++.. ...+.|.|+|+|+|||+|.|.+..|.++
T Consensus 81 ~~~y~l~v~a~~~~p----------------------------------~~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 81 TNPCILHFQVLLKSP----------------------------------VQFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CSSCCBCCEEEETTT----------------------------------TEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred CCcEEEEEEEEECCC----------------------------------CeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 88888776643210 0146789999999999999999988654
No 42
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.73 E-value=1.4e-17 Score=133.73 Aligned_cols=88 Identities=23% Similarity=0.233 Sum_probs=80.3
Q ss_pred eeeccCC--CCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEECC-c
Q psy8629 348 SFDEIAE--PGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATDNG-V 424 (483)
Q Consensus 348 ~v~E~~~--~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g-~ 424 (483)
.|.||.+ .|+.|++|+ +|+|.| |+.++|+|.. ++..+.|.|++.+|.|++.++||||+.+.|.|+|+|+|.| .
T Consensus 9 ~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~--~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~~ 84 (99)
T 1zvn_A 9 FVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSG--EGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTG 84 (99)
T ss_dssp EEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEE--TTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTC
T ss_pred EEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeC--CCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCCC
Confidence 5789976 689999999 999999 9999999984 2344789999999999999999999999999999999999 4
Q ss_pred CCceEEEEEEEEEEe
Q psy8629 425 PALSSSATVLVTIHD 439 (483)
Q Consensus 425 p~~s~~~~v~I~V~d 439 (483)
|+++++++|.|+|.|
T Consensus 85 p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 85 RPMEPESEFIIKIQD 99 (99)
T ss_dssp CBSSCCEEEEEEEEC
T ss_pred CCcceeEEEEEEEeC
Confidence 999999999999987
No 43
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.73 E-value=1.5e-17 Score=133.44 Aligned_cols=88 Identities=25% Similarity=0.259 Sum_probs=78.2
Q ss_pred eeeccCC--CCeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEECCc-
Q psy8629 348 SFDEIAE--PGTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATDNGV- 424 (483)
Q Consensus 348 ~v~E~~~--~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g~- 424 (483)
.|.||.+ +|+.|+++. +|+|.| |+.++|+|.. ++..+.|.||+.+|.|++.++||||+++.|.|+|+|+|+|.
T Consensus 8 ~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~--~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~ 83 (98)
T 1zxk_A 8 FVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSG--DGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETN 83 (98)
T ss_dssp EECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEE--TTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTC
T ss_pred EEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeC--CCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCCC
Confidence 5789985 899999997 999999 9999999984 23446899999999999999999999999999999999997
Q ss_pred CCceEEEEEEEEEEe
Q psy8629 425 PALSSSATVLVTIHD 439 (483)
Q Consensus 425 p~~s~~~~v~I~V~d 439 (483)
|+++++++|.|.|.|
T Consensus 84 ~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 84 KPLEPPSEFIIKVQD 98 (98)
T ss_dssp CBSSCCEEEEEEECC
T ss_pred CCcceeEEEEEEEEC
Confidence 789999999999986
No 44
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=7.6e-19 Score=147.66 Aligned_cols=101 Identities=21% Similarity=0.205 Sum_probs=87.3
Q ss_pred eeeccCCCCeEEEEEEEEeCCCCCCceE---EEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCC----CeeEEEEEEE
Q psy8629 348 SFDEIAEPGTSVFQISAFDQDEGINSVI---TYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETD----PVPKLTVIAT 420 (483)
Q Consensus 348 ~v~E~~~~gt~v~~v~a~D~D~~~~~~v---~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~----~~y~l~V~a~ 420 (483)
.|.|+.++|+.|+++ |+|.|.+. +.+ +|+|.. ++..++|.||+.||.|++.++||||.. ..|.|+|.|.
T Consensus 16 ~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~--~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~a~ 91 (125)
T 1wyj_A 16 SVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILS--KGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQVL 91 (125)
T ss_dssp EECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEEC--SSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCEEE
T ss_pred EEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEec--CCCCCeEEEECCccEEEECccccchhhcccCCcEEEEEEEE
Confidence 578999999999999 99998753 344 899984 456689999999999999999999999 9999999999
Q ss_pred ECCcCCceEEEEEEEEEEecCCCCCeecCCceEEE
Q psy8629 421 DNGVPALSSSATVLVTIHDVNDNEPIFDQSFYNVT 455 (483)
Q Consensus 421 D~g~p~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~ 455 (483)
+. .| + ..++|.|+|.|+|||+|.|.++.|..+
T Consensus 92 ~~-~p-~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 92 LK-SP-V-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp ET-TT-T-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EC-CC-C-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 84 33 3 488999999999999999999988654
No 45
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.71 E-value=6.3e-17 Score=129.96 Aligned_cols=91 Identities=22% Similarity=0.253 Sum_probs=81.9
Q ss_pred eEEEEeCCCC--CCeEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEE
Q psy8629 156 MSIEFPENTP--RDVKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVI 233 (483)
Q Consensus 156 ~~~~V~E~~~--~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v 233 (483)
+.+.|+||.+ .|+.|+++. +|+|.| |+.++|+|.+++..+.|.|++. +|. |.+.++||||+.+.|.|+|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~l~V 76 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDT---TGD----IHAIQRLDREERSQYTLRA 76 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTT---TCE----EEECSCCCTTTCSEEEEEE
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCC---CCC----EEECeecCCccCCeEEEEE
Confidence 4689999976 689999999 999999 9999999988665678999984 566 7788999999999999999
Q ss_pred EEEECC-CCCeeeEEEEEEEEEe
Q psy8629 234 EALDGG-SPPLRGSMIVNVTIQD 255 (483)
Q Consensus 234 ~a~D~g-~p~~~~~~~v~I~V~d 255 (483)
.|+|+| +|++++.+.|.|+|.|
T Consensus 77 ~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 77 QALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp EEEETTTCCBSSCCEEEEEEEEC
T ss_pred EEEECCCCCCcceeEEEEEEEeC
Confidence 999999 5999999999999987
No 46
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.70 E-value=5e-17 Score=130.83 Aligned_cols=88 Identities=19% Similarity=0.206 Sum_probs=80.8
Q ss_pred eeeccCCC--CeEEEEEEEEeCCCCCCceEEEEEeeC--CCCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEECC
Q psy8629 348 SFDEIAEP--GTSVFQISAFDQDEGINSVITYSLREN--TDDHPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATDNG 423 (483)
Q Consensus 348 ~v~E~~~~--gt~v~~v~a~D~D~~~~~~v~y~l~~~--~~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g 423 (483)
.|.||.++ |+.|++|+|+|+|. .++|+|... .++..+.|.||+.+|.|++.++||||....|.|+|.|+|+|
T Consensus 8 ~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g 83 (99)
T 3k6d_A 8 SIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTDEN 83 (99)
T ss_dssp EEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTT
T ss_pred EEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEECC
Confidence 57899999 99999999999996 799999852 24556899999999999999999999999999999999999
Q ss_pred cCCceEEEEEEEEEEe
Q psy8629 424 VPALSSSATVLVTIHD 439 (483)
Q Consensus 424 ~p~~s~~~~v~I~V~d 439 (483)
.|+++++++|.|+|.|
T Consensus 84 ~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 84 GKTIEGPVDLEILVID 99 (99)
T ss_dssp CCEEEEEEEEEEEEEC
T ss_pred CCceeeEEEEEEEEEC
Confidence 9999999999999987
No 47
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.70 E-value=9.2e-17 Score=128.84 Aligned_cols=91 Identities=22% Similarity=0.274 Sum_probs=79.8
Q ss_pred eEEEEeCCCC--CCeEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEEEEE
Q psy8629 156 MSIEFPENTP--RDVKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYSLVI 233 (483)
Q Consensus 156 ~~~~V~E~~~--~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~l~v 233 (483)
+.+.|+||.+ .|+.|+++. +|+|.| |+.++|+|.+++..+.|.|++. +|. |.+.++||||+++.|.|+|
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~l~v 75 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDI---TGD----IHAIKRLDREEKAEYTLTA 75 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTT---TCE----EEECSCCCTTTCSEEEEEE
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECC---ccE----EEECccCCCcCCCeEEEEE
Confidence 4689999985 899999997 999999 9999999987655668999984 566 7788999999999999999
Q ss_pred EEEECCC-CCeeeEEEEEEEEEe
Q psy8629 234 EALDGGS-PPLRGSMIVNVTIQD 255 (483)
Q Consensus 234 ~a~D~g~-p~~~~~~~v~I~V~d 255 (483)
.|+|+|. |++++++.|+|+|+|
T Consensus 76 ~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 76 QAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp EEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEECCCCCCcceeEEEEEEEEC
Confidence 9999997 789999999999986
No 48
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.69 E-value=1.1e-16 Score=129.06 Aligned_cols=88 Identities=22% Similarity=0.239 Sum_probs=80.2
Q ss_pred eeeccCCC--CeEEEEEEEEeCCCCCCceEEEEEeeCC--CCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEECC
Q psy8629 348 SFDEIAEP--GTSVFQISAFDQDEGINSVITYSLRENT--DDHPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATDNG 423 (483)
Q Consensus 348 ~v~E~~~~--gt~v~~v~a~D~D~~~~~~v~y~l~~~~--~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g 423 (483)
.|.||.++ |+.|++|.|+|+|. .++|+|.... ++..+.|.||+.||.|++.++||||....|.|+|+|+|.|
T Consensus 9 ~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g 84 (100)
T 3k6f_A 9 LIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDAS 84 (100)
T ss_dssp EEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTT
T ss_pred EEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEECC
Confidence 57899998 89999999999996 6899998532 3456899999999999999999999999999999999999
Q ss_pred cCCceEEEEEEEEEEe
Q psy8629 424 VPALSSSATVLVTIHD 439 (483)
Q Consensus 424 ~p~~s~~~~v~I~V~d 439 (483)
.|++++.++|.|+|.|
T Consensus 85 ~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 85 GKTLEGPVPLEVIVID 100 (100)
T ss_dssp CCEEEEEEEEEEEEEC
T ss_pred CCcccceEEEEEEEEC
Confidence 9999999999999987
No 49
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.69 E-value=1.7e-16 Score=127.71 Aligned_cols=88 Identities=20% Similarity=0.216 Sum_probs=80.1
Q ss_pred eeeccCCCC--eEEEEEEEEeCCCCCCceEEEEEeeCC--CCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEECC
Q psy8629 348 SFDEIAEPG--TSVFQISAFDQDEGINSVITYSLRENT--DDHPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATDNG 423 (483)
Q Consensus 348 ~v~E~~~~g--t~v~~v~a~D~D~~~~~~v~y~l~~~~--~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g 423 (483)
.|.||.++| +.|++|.|+|+|. .++|+|.... ++..+.|.||+.+|.|++.++||||....|.|+|+|+|.|
T Consensus 8 ~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g 83 (99)
T 3k6i_A 8 LIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLS 83 (99)
T ss_dssp EEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETT
T ss_pred EEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEECC
Confidence 578999997 9999999999996 7999998431 3456899999999999999999999999999999999999
Q ss_pred cCCceEEEEEEEEEEe
Q psy8629 424 VPALSSSATVLVTIHD 439 (483)
Q Consensus 424 ~p~~s~~~~v~I~V~d 439 (483)
.|++++.++|.|.|.|
T Consensus 84 ~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 84 GKIIDGPVRLDISVID 99 (99)
T ss_dssp SCEEEEEEEEEEEEEC
T ss_pred CCceeeeEEEEEEEEC
Confidence 9999999999999987
No 50
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.67 E-value=2.2e-16 Score=128.45 Aligned_cols=90 Identities=20% Similarity=0.254 Sum_probs=78.6
Q ss_pred eeeccCC--CCeEEEEEEEEeCCCCCCceEEEEEeeCCCC--CCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEECC
Q psy8629 348 SFDEIAE--PGTSVFQISAFDQDEGINSVITYSLRENTDD--HPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATDNG 423 (483)
Q Consensus 348 ~v~E~~~--~gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~--~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g 423 (483)
.|.||++ .|+.|+++.| |. |.|+.++|+|.....+ ..+.|.||+.||.|++.++||||++..|.|+|+|+|.|
T Consensus 12 ~V~En~~~~~~~~v~~v~A-d~--g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g 88 (105)
T 2omz_B 12 SCPENEKGPFPKNLVQIKS-NK--DKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSN 88 (105)
T ss_dssp CEESSCCSSSSEEEEECEE-GG--GGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTT
T ss_pred EEeCCCCCCCCcEEEEEEC-CC--CCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEECC
Confidence 5789998 5889999999 43 5799999999854211 25689999999999999999999999999999999999
Q ss_pred cCCceEEEEEEEEEEec
Q psy8629 424 VPALSSSATVLVTIHDV 440 (483)
Q Consensus 424 ~p~~s~~~~v~I~V~dv 440 (483)
.|+++++++|.|.|.|+
T Consensus 89 ~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 89 GNAVEDPMEILITVTDQ 105 (105)
T ss_dssp SCBSSCCEEEEEEEEC-
T ss_pred CCceeeEEEEEEEEEeC
Confidence 99999999999999985
No 51
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.65 E-value=6.4e-16 Score=124.35 Aligned_cols=88 Identities=24% Similarity=0.411 Sum_probs=79.4
Q ss_pred EEEEeCCCCC--CeEEEEEEEEeCCCCCCceEEEEEEe----CCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEE
Q psy8629 157 SIEFPENTPR--DVKRTLNAAKDRDLGIYNTQRYNIVS----GNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYS 230 (483)
Q Consensus 157 ~~~V~E~~~~--gt~v~~v~a~D~D~~~~~~~~y~l~~----~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~ 230 (483)
.+.|+||.++ |+.|++|.|+|+|. .++|+|.+ +++.+.|.|++. +|. |.+.++||||+.+.|.
T Consensus 6 ~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~ 74 (99)
T 3k6d_A 6 SISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINEN---SGE----VSVTKALDREAIPSYQ 74 (99)
T ss_dssp CEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTT---TCE----EEECSCCCTTTCCEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECC---ceE----EEECcCCCcccCceEE
Confidence 5899999999 99999999999997 68999975 344679999984 566 8889999999999999
Q ss_pred EEEEEEECCCCCeeeEEEEEEEEEe
Q psy8629 231 LVIEALDGGSPPLRGSMIVNVTIQD 255 (483)
Q Consensus 231 l~v~a~D~g~p~~~~~~~v~I~V~d 255 (483)
|+|.|+|+|+|++++.+.|+|+|+|
T Consensus 75 l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 75 LQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEECCCCceeeEEEEEEEEEC
Confidence 9999999999999999999999987
No 52
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.63 E-value=2.8e-15 Score=120.84 Aligned_cols=88 Identities=26% Similarity=0.466 Sum_probs=78.7
Q ss_pred EEEEeCCCCC--CeEEEEEEEEeCCCCCCceEEEEEEeC----CCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEE
Q psy8629 157 SIEFPENTPR--DVKRTLNAAKDRDLGIYNTQRYNIVSG----NTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYS 230 (483)
Q Consensus 157 ~~~V~E~~~~--gt~v~~v~a~D~D~~~~~~~~y~l~~~----~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~ 230 (483)
.+.|+||.+. |+.|++|.|+|+|. .++|+|.+. ++.+.|.|++. +|. |.+.++||||+...|.
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~ 75 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINEN---TGS----VSVTRTLDRETIATYQ 75 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTT---TCE----EEECSCCCTTTCSEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECC---CCE----EEECcccCCcCCCEEE
Confidence 4899999998 89999999999997 589999863 34578999984 566 7889999999999999
Q ss_pred EEEEEEECCCCCeeeEEEEEEEEEe
Q psy8629 231 LVIEALDGGSPPLRGSMIVNVTIQD 255 (483)
Q Consensus 231 l~v~a~D~g~p~~~~~~~v~I~V~d 255 (483)
|+|+|+|+|+|++++.++|+|+|+|
T Consensus 76 l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 76 LYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEECCCCcccceEEEEEEEEC
Confidence 9999999999999999999999987
No 53
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.63 E-value=3.8e-15 Score=119.82 Aligned_cols=88 Identities=20% Similarity=0.357 Sum_probs=78.6
Q ss_pred EEEEeCCCCCC--eEEEEEEEEeCCCCCCceEEEEEEeC----CCCCceEEecccCCCceEEEEEEeccCCCCCCCCEEE
Q psy8629 157 SIEFPENTPRD--VKRTLNAAKDRDLGIYNTQRYNIVSG----NTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYS 230 (483)
Q Consensus 157 ~~~V~E~~~~g--t~v~~v~a~D~D~~~~~~~~y~l~~~----~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~ 230 (483)
.+.|+||.+.| +.|++|.|+|+|. .++|+|.+. ++.+.|.|++. +|. |.+.++||||+...|.
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~---tG~----i~~~~~LDrE~~~~y~ 74 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEI---SGD----VSVTRPLDREAIANYE 74 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTT---TCE----EEECSCCCTTTCCEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECC---CcE----EEECcccCCccCCEEE
Confidence 37999999997 8999999999997 699999863 34578999984 566 7889999999999999
Q ss_pred EEEEEEECCCCCeeeEEEEEEEEEe
Q psy8629 231 LVIEALDGGSPPLRGSMIVNVTIQD 255 (483)
Q Consensus 231 l~v~a~D~g~p~~~~~~~v~I~V~d 255 (483)
|.|.|+|+|+|++++.+++.|.|+|
T Consensus 75 l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 75 LEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred EEEEEEECCCCceeeeEEEEEEEEC
Confidence 9999999999999999999999987
No 54
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.61 E-value=1.8e-15 Score=123.09 Aligned_cols=90 Identities=22% Similarity=0.309 Sum_probs=78.1
Q ss_pred EEEEeCCCC--CCeEEEEEEEEeCCCCCCceEEEEEEeCCC----CCceEEecccCCCceEEEEEEeccCCCCCCCCEEE
Q psy8629 157 SIEFPENTP--RDVKRTLNAAKDRDLGIYNTQRYNIVSGNT----NNAFRLSSHREKDGVLYLDLQINGVLDRETIPEYS 230 (483)
Q Consensus 157 ~~~V~E~~~--~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~----~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~~ 230 (483)
.+.|+||.+ .|+.|+++.| | .|.|+.++|+|.+++. .+.|.|++. +|. |.+.++||||+++.|.
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~---tG~----I~~~~~LDrE~~~~y~ 79 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERE---TGW----LKVTEPLDRERIATYT 79 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTT---TCE----EEECSCCCTTTCCEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCC---CCE----EEECccCCcCCCCeEE
Confidence 478999999 5889999999 3 3568999999988653 358999984 566 7889999999999999
Q ss_pred EEEEEEECCCCCeeeEEEEEEEEEec
Q psy8629 231 LVIEALDGGSPPLRGSMIVNVTIQDV 256 (483)
Q Consensus 231 l~v~a~D~g~p~~~~~~~v~I~V~dv 256 (483)
|+|+|+|+|.|++++++.|+|+|+|+
T Consensus 80 l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 80 LFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred EEEEEEECCCCceeeEEEEEEEEEeC
Confidence 99999999999999999999999985
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.51 E-value=1.2e-14 Score=117.68 Aligned_cols=64 Identities=20% Similarity=0.185 Sum_probs=54.5
Q ss_pred CceEEEEEeCCCCCCeEEEEEEccCCCCC-----CCCEEEEecCCCCCcccEEEeCCccEEEeCccCCccCCc
Q psy8629 17 EHLRDLEISEGVPVGTRVGFIGDGFVGDS-----GPPYLIVPVPGSAVDTDLSIEQNTGEIRTKVPLDRETRS 84 (483)
Q Consensus 17 ~~~~~~~v~En~~~gt~V~~v~a~d~d~~-----~~~y~i~~~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~ 84 (483)
..+|.++|+|++++|+.||+| |.|.|.. .+.|+|.+. +...+|.||+.||.|+++++||||+.+
T Consensus 2 ~~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~---~~~~~F~Id~~tG~i~~~~~LDRE~~~ 70 (103)
T 1wuz_A 2 NSQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASK---DRGDLLEVNLQNGILFVNSRIDREELC 70 (103)
T ss_dssp CCEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCS---SCSCSEEEETTTTEEEECSCCSHHHHC
T ss_pred ceeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeC---CCccEEEEECCeEEEEECCcCcccccc
Confidence 367899999999999999999 9997632 578999853 235699999999999999999999863
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.35 E-value=1.1e-13 Score=111.91 Aligned_cols=90 Identities=24% Similarity=0.303 Sum_probs=70.8
Q ss_pred eeeccCCCCeEEEEEEEEeCCCCCC--ceEEEEEeeCCCCCCCcEEEeCCCcEEEEcccCCCCCC----CeeEEEEEEEE
Q psy8629 348 SFDEIAEPGTSVFQISAFDQDEGIN--SVITYSLRENTDDHPSWFQIDSKSGLITMKSNVDCETD----PVPKLTVIATD 421 (483)
Q Consensus 348 ~v~E~~~~gt~v~~v~a~D~D~~~~--~~v~y~l~~~~~~~~~~F~id~~tG~i~~~~~lD~E~~----~~y~l~V~a~D 421 (483)
+|.|++++|+.|++| |.|+|.+.+ ..++|+|.. ++...+|.|++.||.|++.+.||||.. ..|.+.+.+..
T Consensus 8 ~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~--~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v~~ 84 (103)
T 1wuz_A 8 SIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVAS--KDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIV 84 (103)
T ss_dssp EEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBC--SSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEEEE
T ss_pred EEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEe--CCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEEEEE
Confidence 678999999999999 999886322 358899983 456789999999999999999999985 23344444444
Q ss_pred CCcCCceEEEEEEEEEEecCCC
Q psy8629 422 NGVPALSSSATVLVTIHDVNDN 443 (483)
Q Consensus 422 ~g~p~~s~~~~v~I~V~dvNd~ 443 (483)
. .| + ..+.|.|.|.|+|||
T Consensus 85 ~-~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 85 D-RP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp T-TT-T-EEEEEEEEEECCSCC
T ss_pred C-CC-C-EEEEEEEEEEEcCCC
Confidence 3 34 3 378999999999997
No 57
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=91.03 E-value=7.9 Score=36.51 Aligned_cols=151 Identities=18% Similarity=0.138 Sum_probs=76.6
Q ss_pred CCCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCCCCC--ce-----EEecccCCCceEEEEEEe
Q psy8629 145 NDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGNTNN--AF-----RLSSHREKDGVLYLDLQI 217 (483)
Q Consensus 145 ND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~~--~F-----~i~~~~~~~g~~~~~l~~ 217 (483)
+|+++.|....-...|.|+. |+....|.- ..+......+.|+...|.... -| .+.-..|.+- -.+.|.+
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R-~g~~~~~vtV~y~T~~GTA~ag~Dy~~~~gtl~F~~Get~-kti~V~I 81 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVR-RGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDE-QRFRIEV 81 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEE-CSCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCE-ECCEECB
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEE-ECCCCccEEEEEEeeCCccCCCCCccccceEEEECCCceE-EEEEEEE
Confidence 46677776666678999986 333333322 234433456888887764321 22 1111111111 1112323
Q ss_pred ccCCCCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccE
Q psy8629 218 NGVLDRETIPEYSLVIEALDGGSPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGE 297 (483)
Q Consensus 218 ~~~LD~E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~ 297 (483)
...--+|....|.+.+..-. ++..+......+|+|.| ||++|.|.-..-..+|.|+. |....+|.-+-.-.+ .-.
T Consensus 82 ~dD~~~E~dEtF~v~Ls~p~-~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~~g-~vt 156 (298)
T 3rb5_A 82 IDDDVFEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGARG-TVI 156 (298)
T ss_dssp CCCSSCCCCEEEEEEEECCC-TTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCCCS-CEE
T ss_pred eCCCCccCcEEEEEEEeCCC-CCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecCCC-CEE
Confidence 33333565566666655322 22223333345667776 67789877665567899985 676677665543322 345
Q ss_pred EEEEEEe
Q psy8629 298 VEYSINR 304 (483)
Q Consensus 298 i~y~i~~ 304 (483)
+.|....
T Consensus 157 V~~~T~d 163 (298)
T 3rb5_A 157 VPYWTEN 163 (298)
T ss_dssp EEEEEEE
T ss_pred EEEEecC
Confidence 7776543
No 58
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=89.24 E-value=3.6 Score=40.87 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=56.9
Q ss_pred cCCCCCCccCCCce------EEEEeCCCCCCeEEEEEEE---EeCCCCCCceEEEEEEeCCCC----CceEEecccCCCc
Q psy8629 143 DENDNAPTFPSPFM------SIEFPENTPRDVKRTLNAA---KDRDLGIYNTQRYNIVSGNTN----NAFRLSSHREKDG 209 (483)
Q Consensus 143 DvND~~P~f~~~~~------~~~V~E~~~~gt~v~~v~a---~D~D~~~~~~~~y~l~~~~~~----~~F~i~~~~~~~g 209 (483)
..| ++|+.....- ..+|.+ |..| ++.| +|+|. ..++|+-..-... ....|.... ..
T Consensus 329 ~aN-haPVa~iag~~g~~p~~~~v~a----G~tV-tLdAs~SsDPDG---D~LtY~W~q~~g~g~~~~~vtls~~~--~~ 397 (437)
T 2yhg_A 329 AAN-HHPVPVVNNDANEAVMYLNASA----GSTV-SLDASGSSDPDG---DSLNYSWSHYGEADSYSGSVSISNSS--SA 397 (437)
T ss_dssp GSC-CCCBCCBTTBCCSSCEEEEECT----TCEE-EEECTTCBCTTC---CCEEEEEEECTTTSSCCSCCCEETTT--SS
T ss_pred cCC-CCCEEEecCCCcccccceEecC----CCEE-EEEeeeeeCCCC---CeEEEEEEEeCCCCccccceEeecCC--Cc
Confidence 345 5788763221 345544 3333 3333 48884 3678877643222 244554322 22
Q ss_pred eEEEEEEeccCCCCCCCCEEEEEEEEEECCCCCeeeEEEEEEEE
Q psy8629 210 VLYLDLQINGVLDRETIPEYSLVIEALDGGSPPLRGSMIVNVTI 253 (483)
Q Consensus 210 ~~~~~l~~~~~LD~E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V 253 (483)
. +.+..+-+ +....|.|.++++|++.|.+++...++|+|
T Consensus 398 ~----~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 398 S----ANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp E----EEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred e----EEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 3 33334433 456799999999999999999999999987
No 59
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=87.92 E-value=2.1 Score=42.55 Aligned_cols=69 Identities=19% Similarity=0.252 Sum_probs=48.1
Q ss_pred EeCCCCCCceEEEEEeeCCCC--CCCcEEEe-CCCcEEEEcccCCCCCCCeeEEEEEEEECCcCCceEEEEEEEEE
Q psy8629 365 FDQDEGINSVITYSLRENTDD--HPSWFQID-SKSGLITMKSNVDCETDPVPKLTVIATDNGVPALSSSATVLVTI 437 (483)
Q Consensus 365 ~D~D~~~~~~v~y~l~~~~~~--~~~~F~id-~~tG~i~~~~~lD~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V 437 (483)
+|+| +..++|+=..-.++ ......|. +.+..++...+-+ +....|.+.++++|++.|++++...|.|+|
T Consensus 365 sDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 365 SDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp BCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 4887 45677776543222 22345564 4455666665544 456789999999999999999999999887
No 60
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=84.41 E-value=12 Score=31.76 Aligned_cols=58 Identities=10% Similarity=-0.038 Sum_probs=28.5
Q ss_pred EEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCCC
Q psy8629 135 VRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGNT 195 (483)
Q Consensus 135 ~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~ 195 (483)
+.+.+.|.|- |..+.|....-..+|.|+. |+.-..|.-...+.+....+.|+...|..
T Consensus 10 ~~~~~~i~dd-d~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA 67 (160)
T 3gin_A 10 AALEVLFQGP-GPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTA 67 (160)
T ss_dssp ------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSS
T ss_pred ceEEEEEecC-CCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcc
Confidence 4566677764 3456665555568899986 44444443333443334568898887654
No 61
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=82.42 E-value=2.9 Score=35.40 Aligned_cols=61 Identities=10% Similarity=0.101 Sum_probs=46.8
Q ss_pred HhhhcCceEEEEEeCCCCCCeEEEEEEccCCCCCCC-CEEEEecCCCCCcccEEEeCCccEEEeCccCC
Q psy8629 12 AVAADEHLRDLEISEGVPVGTRVGFIGDGFVGDSGP-PYLIVPVPGSAVDTDLSIEQNTGEIRTKVPLD 79 (483)
Q Consensus 12 ~~~~~~~~~~~~v~En~~~gt~V~~v~a~d~d~~~~-~y~i~~~~~~~~~~~F~Id~~tG~i~~~~~LD 79 (483)
-++|.+..|...++-+...|..+++|+-.|+.++.. .|...+ + ..|.|++ .|.|++++++-
T Consensus 33 ~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g~~~~~~~ssD--p----~dFkV~~-DGtVya~r~v~ 94 (159)
T 1op4_A 33 KTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSE--P----ADFKVDE-DGTVYAVRSFP 94 (159)
T ss_dssp CCBCCSCEEEECCCCSSCSSCCEEECCCBCCSSCCCEEEECCC--S----SEEEEET-TTEEEEESCCS
T ss_pred cCCcCcceeEEeccccccCCceeceeecccCCCCCceeEEcCC--C----CCeEEeC-CCcEEEeccee
Confidence 348999999888889999999999999999765543 355432 1 1699995 59999998754
No 62
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=79.58 E-value=30 Score=29.99 Aligned_cols=146 Identities=14% Similarity=0.162 Sum_probs=71.0
Q ss_pred eeEEEEecCCcceeEEEeecCcEEEEc---c----cCCccccceEEEEEEeCCC--Ce---EEEEEEEecCCCCCCccCC
Q psy8629 86 YSLVAIPLSGENVRVVSFYEPGEIRTK---V----PLDRETRSSYSLVAIPLSG--EN---VRVVVRVIDENDNAPTFPS 153 (483)
Q Consensus 86 y~l~v~a~d~~~~~~~~~~~~g~l~~~---~----~ld~e~~~~~~~~~~~~~~--~~---~~v~I~V~DvND~~P~f~~ 153 (483)
..|...|.+.+.+..+.++..|.+.-. . ..+......|.|.+++.|. .. ..+.|+|.+ ..+|..
T Consensus 19 vtv~~~As~d~~V~~Ve~~~dg~~v~~~t~~~ys~~~~~~~~G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv-- 94 (190)
T 3pdd_A 19 INISATVKSKTPVSKVEFYNGDTLISSDTTAPYTAKITGAAVGAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTV-- 94 (190)
T ss_dssp EEEEEEECCSSCEEEEEEEETTEEEEEECSSSEEEEECSCCSEEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEE--
T ss_pred EEEEEEEeCCCCEEEEEEEECCEEEccccCCceEEEeccCCCccEEEEEEEEECCCCEeeecceeEEecc--CCCCce--
Confidence 445555554444544555444443211 1 1122234477887777664 32 247788776 346643
Q ss_pred CceEEEEeCCCC---CC-eEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCCCCEE
Q psy8629 154 PFMSIEFPENTP---RD-VKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRETIPEY 229 (483)
Q Consensus 154 ~~~~~~V~E~~~---~g-t~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~ 229 (483)
.+.-+.+.. .| ..-....|.|.|.+ -..+.|.+ ++ ....-+ ..+...+.. .. ....|
T Consensus 95 ---~itsP~~g~~~~~~~~vtl~~~AsD~~g~-V~~Ve~~~--dg--~~v~t~----t~~~y~~~~--~~-----~~G~~ 155 (190)
T 3pdd_A 95 ---KLTAPKSNVVAYGNEFLKITATASDSDGK-ISRVDFLV--DG--EVIGSD----REAPYEYEW--KA-----VEGNH 155 (190)
T ss_dssp ---EEEECCTTCCCBTTSEEEEEEEEECSSSC-EEEEEEEE--TT--EEEEEE----CSSSEEEEE--EC-----CSEEE
T ss_pred ---eecCCCCCcEEecCCeEEEEEEEECCCCc-EEEEEEEE--CC--EEEecc----cCCCEEEEE--ec-----CCeeE
Confidence 344444432 23 34445677776632 12344443 21 111111 111111111 11 45689
Q ss_pred EEEEEEEECCCCCeeeEEEEEEEEEe
Q psy8629 230 SLVIEALDGGSPPLRGSMIVNVTIQD 255 (483)
Q Consensus 230 ~l~v~a~D~g~p~~~~~~~v~I~V~d 255 (483)
.|+++|+|..+- .+....+.|+|.+
T Consensus 156 tl~a~A~D~aGn-~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 156 EISVIAYDDDDA-ASTPDSVKIFVKQ 180 (190)
T ss_dssp EEEEEEEETTCC-BCCCEEEEEEEBC
T ss_pred EEEEEEEECCCC-EEecceEEEEECC
Confidence 999999996652 2345667777764
No 63
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=79.07 E-value=10 Score=31.14 Aligned_cols=125 Identities=18% Similarity=0.132 Sum_probs=44.3
Q ss_pred CCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCCCCC--ce-----EEecccCCCceEEEEEEec
Q psy8629 146 DNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGNTNN--AF-----RLSSHREKDGVLYLDLQIN 218 (483)
Q Consensus 146 D~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~~--~F-----~i~~~~~~~g~~~~~l~~~ 218 (483)
|+.+.+....-...|.|+. |+....|.-. .+......+.|+...|.... -| .+.-..|.+. -++.+.+.
T Consensus 2 d~~~~i~F~~~~y~V~E~~--g~~~v~V~R~-g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~-k~i~V~I~ 77 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDE-QRFRIEVI 77 (137)
T ss_dssp ---CEEEESSCEEEEEGGG--CEEEEEEEEE-SCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCE-EEEEEEBC
T ss_pred CCCEEEEEcCCEEEEECCC--eEEEEEEEEE-CCCCceEEEEEEeECCCcCCCCcEeEeeEEEEECCCceE-EEEEEEEe
Confidence 3444444444457888975 3433333222 34334456888877664321 11 1111112211 12223333
Q ss_pred cCCCCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCC
Q psy8629 219 GVLDRETIPEYSLVIEALDGGSPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENA 276 (483)
Q Consensus 219 ~~LD~E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~ 276 (483)
..--+|....|.+.+.--. ++..+......+|+|.| ||.+|.|.-..-...|.|+.
T Consensus 78 dD~~~E~~E~F~v~L~~p~-~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~ 133 (137)
T 3ead_A 78 DDDVFEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV 133 (137)
T ss_dssp CCSSCCCCEEEEEEEECCC-TTCEECSCSEEEEEEEC-CC------------------
T ss_pred cCCcccCcEEEEEEEECCC-CCcEECCCcEEEEEEEC-CCCCCEEEECCCcEEEeccc
Confidence 3333455556655554321 11112222233444455 46678765554456677764
No 64
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.72 E-value=7.2 Score=30.22 Aligned_cols=32 Identities=19% Similarity=0.356 Sum_probs=27.1
Q ss_pred CCCEEEEEEEEEECCCCCeeeEEEEEEEEEecCC
Q psy8629 225 TIPEYSLVIEALDGGSPPLRGSMIVNVTIQDVND 258 (483)
Q Consensus 225 ~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~dvNd 258 (483)
....|.|++.++|..+ ++++..++|+|...+.
T Consensus 67 ~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN--LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC--CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC--CEEEeEEEEEEcCCCC
Confidence 4569999999999876 7888999999998764
No 65
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=74.37 E-value=4.6 Score=31.52 Aligned_cols=45 Identities=16% Similarity=0.237 Sum_probs=35.1
Q ss_pred EEeccCCCCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEecCCCCC
Q psy8629 215 LQINGVLDRETIPEYSLVIEALDGGSPPLRGSMIVNVTIQDVNDNQP 261 (483)
Q Consensus 215 l~~~~~LD~E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~dvNd~~P 261 (483)
|.+.+..|..+...|.++-.++|..+ ..++++.+|+|.+..+..|
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~G--n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSKG--HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTTS--CEEEEEEEEEEECSSCCCC
T ss_pred EEEeCcccCCCceEEEEEEEEEcCCC--CEEEEEEEEEEeCCCcccC
Confidence 44456678888889999999999776 6778888899987665443
No 66
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=74.35 E-value=24 Score=29.73 Aligned_cols=81 Identities=14% Similarity=0.153 Sum_probs=57.0
Q ss_pred CCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCCCCCceEEecccCCCceEEEEEEeccCCCCCC
Q psy8629 146 DNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGNTNNAFRLSSHREKDGVLYLDLQINGVLDRET 225 (483)
Q Consensus 146 D~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~~~F~i~~~~~~~g~~~~~l~~~~~LD~E~ 225 (483)
-+.|-|.+..|...++-....|..+++|.-.|... +..+.|.-.. ...|.|. .+|. |.+.+++-.-.
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~ssD---p~dFkV~----~DGt----Vya~r~v~L~~ 97 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESSE---PADFKVD----EDGT----VYAVRSFPLTA 97 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEECCC---SSEEEEE----TTTE----EEEESCCSCSS
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCCC--CCceeEEcCC---CCCeEEe----CCCc----EEEecceeecC
Confidence 35699999999888888889999999998888763 3456665432 2379999 4677 45556653222
Q ss_pred CCEEEEEEEEEECCC
Q psy8629 226 IPEYSLVIEALDGGS 240 (483)
Q Consensus 226 ~~~~~l~v~a~D~g~ 240 (483)
..-.|.|.|.|...
T Consensus 98 -~~~~F~V~a~D~~t 111 (159)
T 1op4_A 98 -EQAKFLIYAQDKET 111 (159)
T ss_dssp -SCEEEEEEEEETTT
T ss_pred -CCcEEEEEEEcCCC
Confidence 23478899999543
No 67
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=73.32 E-value=61 Score=30.34 Aligned_cols=74 Identities=15% Similarity=0.047 Sum_probs=42.8
Q ss_pred ccccceEEEEEEeCC-C----CeEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEE
Q psy8629 117 RETRSSYSLVAIPLS-G----ENVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIV 191 (483)
Q Consensus 117 ~e~~~~~~~~~~~~~-~----~~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~ 191 (483)
.|....|.+.+.... + .....+|+|.| ||++|.|....-..+|.|+. |.....|.-+.. ....-.+.|+..
T Consensus 87 ~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~-~~g~vtV~~~T~ 162 (298)
T 3rb5_A 87 FEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSG-ARGTVIVPYWTE 162 (298)
T ss_dssp CCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESC-CCSCEEEEEEEE
T ss_pred ccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEec-CCCCEEEEEEec
Confidence 344456777666432 2 24457777777 67789876655568899986 444444433322 222335677766
Q ss_pred eCC
Q psy8629 192 SGN 194 (483)
Q Consensus 192 ~~~ 194 (483)
.|.
T Consensus 163 dGT 165 (298)
T 3rb5_A 163 NDT 165 (298)
T ss_dssp EC-
T ss_pred CCc
Confidence 553
No 68
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=71.45 E-value=8.6 Score=29.93 Aligned_cols=46 Identities=22% Similarity=0.146 Sum_probs=35.8
Q ss_pred EEEEcccCCCCCCCeeEEEEEEEECCcCCceEEEEEEEEEEecCCCCC
Q psy8629 398 LITMKSNVDCETDPVPKLTVIATDNGVPALSSSATVLVTIHDVNDNEP 445 (483)
Q Consensus 398 ~i~~~~~lD~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd~~P 445 (483)
.|.+....|..+.+.|.++-.++|+.+ ..++++.+|+|.+-.+..|
T Consensus 46 ~I~V~g~Vdt~k~G~Y~VtY~VtDs~G--n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 46 KIKVDGEVDTTKAGTYVLTYTVTDSKG--HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp GCEEESCCCSSSCEEEEEEEEEECTTS--CEEEEEEEEEEECSSCCCC
T ss_pred eEEEeCcccCCCceEEEEEEEEEcCCC--CEEEEEEEEEEeCCCcccC
Confidence 344556788889999999999999765 5778889999988665443
No 69
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.69 E-value=7 Score=30.31 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=26.8
Q ss_pred CCCeeEEEEEEEECCcCCceEEEEEEEEEEecCC
Q psy8629 409 TDPVPKLTVIATDNGVPALSSSATVLVTIHDVND 442 (483)
Q Consensus 409 ~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd 442 (483)
....|.+++.++|... ++++.+++|+|...+.
T Consensus 67 ~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN--LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC--CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC--CEEEeEEEEEEcCCCC
Confidence 4679999999999865 6888999999987554
No 70
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=61.07 E-value=17 Score=26.93 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=24.6
Q ss_pred CCCCCCeeEEEEEEEECCcCCceEEEEEEEEEE
Q psy8629 406 DCETDPVPKLTVIATDNGVPALSSSATVLVTIH 438 (483)
Q Consensus 406 D~E~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~ 438 (483)
-|.....|.+++.++|... .+++.++.|+|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 4667889999999999765 566777777775
No 71
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=60.62 E-value=43 Score=30.20 Aligned_cols=66 Identities=18% Similarity=0.257 Sum_probs=44.2
Q ss_pred EEEEEeeC-CCCCCCcEEEeCCCcEEEEcccCCCCCCCeeEEEEEEEEC---CcCCceEEEEEEEEEE--ecCC
Q psy8629 375 ITYSLREN-TDDHPSWFQIDSKSGLITMKSNVDCETDPVPKLTVIATDN---GVPALSSSATVLVTIH--DVND 442 (483)
Q Consensus 375 v~y~l~~~-~~~~~~~F~id~~tG~i~~~~~lD~E~~~~y~l~V~a~D~---g~p~~s~~~~v~I~V~--dvNd 442 (483)
.+|++... ......|...|+.++.+.-. ++ -...+.|.|.|.|++. |.....++..+.|.|. |.||
T Consensus 33 ~~y~vt~a~g~~LPsWL~fd~~t~TfsG~-P~-~~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 33 EIIKVSAAGKEALPSWLHWDPHSHILEGL-PL-DTDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp EEEEEEETTSSSCCTTEEEETTTTEEEEC-CC-GGGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred cEEEEEecCCCCCCcceEEcCCCCeEEec-cC-CCCcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 45665542 34568999999999966432 33 3457789999999964 4333455677788888 5555
No 72
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=58.21 E-value=20 Score=26.49 Aligned_cols=31 Identities=10% Similarity=0.217 Sum_probs=24.2
Q ss_pred CCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEE
Q psy8629 222 DRETIPEYSLVIEALDGGSPPLRGSMIVNVTIQ 254 (483)
Q Consensus 222 D~E~~~~~~l~v~a~D~g~p~~~~~~~v~I~V~ 254 (483)
-|.....|.+++.++|..+ .+++..+.|+|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 3667789999999999876 566777777775
No 73
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=57.74 E-value=34 Score=29.67 Aligned_cols=60 Identities=13% Similarity=0.011 Sum_probs=36.6
Q ss_pred CCCeeEEEEEEEECCcCCceEEEEEEEEEEecCCCCCeecCCceEEEEcCCCC---CC-cEEEEEEEEeCCC
Q psy8629 409 TDPVPKLTVIATDNGVPALSSSATVLVTIHDVNDNEPIFDQSFYNVTIPENKP---KG-SCILKSIFYDIFN 476 (483)
Q Consensus 409 ~~~~y~l~V~a~D~g~p~~s~~~~v~I~V~dvNd~~P~f~~~~~~~~V~E~~~---~g-~~v~~v~a~D~D~ 476 (483)
..+.|.|+++|+|...- .+....+.|+|.+ ..||... ..-+.+.. .| .+-++..|+|.|+
T Consensus 59 ~~G~htlta~A~D~aGn-~s~s~~v~vtV~~--~~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~g 122 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGR-RIESPVTPVLVKV--IVKPTVK-----LTAPKSNVVAYGNEFLKITATASDSDG 122 (190)
T ss_dssp CSEEEEEEEEEEETTSC-EEECCCEEEEEEC--CCCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSSS
T ss_pred CCccEEEEEEEEECCCC-EeeecceeEEecc--CCCCcee-----ecCCCCCcEEecCCeEEEEEEEECCCC
Confidence 35789999999997542 2223356777765 3477542 22333322 24 4557888898876
No 74
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=57.61 E-value=1.2e+02 Score=28.18 Aligned_cols=141 Identities=18% Similarity=0.124 Sum_probs=70.8
Q ss_pred EEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCCCC--Cce-----EEecccCCCceEEEEEEeccCCCCCCCCEE
Q psy8629 157 SIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGNTN--NAF-----RLSSHREKDGVLYLDLQINGVLDRETIPEY 229 (483)
Q Consensus 157 ~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~~~--~~F-----~i~~~~~~~g~~~~~l~~~~~LD~E~~~~~ 229 (483)
...|.|+.. +.-..|.-...+.+....+.|+...|... .-| .+.-..|.+- -.+.|.+...--+|....|
T Consensus 18 ~y~V~E~~G--~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~-kti~V~IidD~~~E~~EtF 94 (295)
T 3us9_A 18 TYQCLENCG--TVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQ-KEIRVGIIDDDIFEEDKNF 94 (295)
T ss_dssp EEEEEGGGS--CEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBCCCCEEEEECSSCCE-EEEEECCCCCSSCCCCEEE
T ss_pred eEEEecCce--EEEEEEEEecCCCCceEEEEEEeeCCcccCCcCccccceEEEECCCceE-EEEEEEEeCCCcccCceEE
Confidence 477888873 44444443333433345688887766432 111 1111122221 1222333332335666677
Q ss_pred EEEEEEEECC----------------CCCeeeEEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCC
Q psy8629 230 SLVIEALDGG----------------SPPLRGSMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAG 293 (483)
Q Consensus 230 ~l~v~a~D~g----------------~p~~~~~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~ 293 (483)
.+.+.---.. +..+......+|+|.| ||++|.|.-..-...|.|+. |....+|.-+-. ..
T Consensus 95 ~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V~Rs~~-~~ 170 (295)
T 3us9_A 95 LVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKVLRTSG-AR 170 (295)
T ss_dssp EEEEECCCCCCCC-------------CCCCCSCCEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEEEEESC-CC
T ss_pred EEEEecCccccccccccccccccCCcccccCCCceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEEEEEcC-CC
Confidence 7666542210 1122222445666776 57789876555567889984 666666654433 22
Q ss_pred CccEEEEEEEe
Q psy8629 294 SNGEVEYSINR 304 (483)
Q Consensus 294 ~~~~i~y~i~~ 304 (483)
..-.+.|....
T Consensus 171 g~VtV~y~T~~ 181 (295)
T 3us9_A 171 GNVIVPYKTIE 181 (295)
T ss_dssp SCEEEEEEEEC
T ss_pred ccEEEEEEecC
Confidence 23456776644
No 75
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=56.88 E-value=77 Score=25.65 Aligned_cols=47 Identities=19% Similarity=0.237 Sum_probs=14.7
Q ss_pred ccccceEEEEEEeC-CCC----eEEEEEEEecCCCCCCccCCCceEEEEeCCC
Q psy8629 117 RETRSSYSLVAIPL-SGE----NVRVVVRVIDENDNAPTFPSPFMSIEFPENT 164 (483)
Q Consensus 117 ~e~~~~~~~~~~~~-~~~----~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~ 164 (483)
.|....|.+..... .+. ....+|+|.|= |.+|.|....-...|.|+.
T Consensus 82 ~E~~E~F~v~L~~p~~~a~lg~~~~atvtI~dd-D~~g~~~f~~~~~~V~E~~ 133 (137)
T 3ead_A 82 FEEDECFYIRLFNPSEGVKLAVPMIATVMILDD-DHAGIFAFTDSVFEITESV 133 (137)
T ss_dssp CCCCEEEEEEEECCCTTCEECSCSEEEEEEECC-C------------------
T ss_pred ccCcEEEEEEEECCCCCcEECCCcEEEEEEECC-CCCCEEEECCCcEEEeccc
Confidence 34455677766643 222 33455555653 6678876655567777775
No 76
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=50.26 E-value=82 Score=23.98 Aligned_cols=71 Identities=17% Similarity=0.148 Sum_probs=38.3
Q ss_pred CeEEEEEEEEeCCCCCCceEEEEEeeCCCCCCCcEEEeCCCc-EEEEcccCCCCCCCeeEEEEEEEECCcCCceEEEEEE
Q psy8629 356 GTSVFQISAFDQDEGINSVITYSLRENTDDHPSWFQIDSKSG-LITMKSNVDCETDPVPKLTVIATDNGVPALSSSATVL 434 (483)
Q Consensus 356 gt~v~~v~a~D~D~~~~~~v~y~l~~~~~~~~~~F~id~~tG-~i~~~~~lD~E~~~~y~l~V~a~D~g~p~~s~~~~v~ 434 (483)
+.+.....|.|.|. .=.+|.|.+. + .....+...- ..... -. .+.|.|+++|+|..+- ......|.
T Consensus 17 ~~v~i~a~A~D~dg-~V~kVef~vd---g---~~vg~dt~apy~~~w~----~~-~G~htl~a~AtD~~G~-~~tS~~v~ 83 (98)
T 3pe9_A 17 EFLKITATASDSDG-KISRVDFLVD---G---EVIGSDREAPYEYEWK----AV-EGNHEISVIAYDDDDA-ASTPDSVK 83 (98)
T ss_dssp SEEEEEEEECCSSS-CEEEEEEEET---T---EEEEEECSSSEEEEEE----CC-SEEEEEEEEEEETTCC-BCCCEEEE
T ss_pred CEEEEEEEEEeCCC-CEEEEEEEEC---C---EEecccccCCEEEEEE----cC-CccEEEEEEEEECCCC-EEeeeEEE
Confidence 44567778888763 2346677664 1 1222221111 11111 11 5899999999997542 23345666
Q ss_pred EEEEe
Q psy8629 435 VTIHD 439 (483)
Q Consensus 435 I~V~d 439 (483)
|+|.+
T Consensus 84 vtV~~ 88 (98)
T 3pe9_A 84 IFVKQ 88 (98)
T ss_dssp EEEEC
T ss_pred EEECc
Confidence 66653
No 77
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=45.97 E-value=1.3e+02 Score=25.11 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=28.5
Q ss_pred EEEEEEEEEecCCCCCeecCCceEEEecCCCCCCcEEEEEEEEeCCCCCccEEEEEEEec
Q psy8629 246 SMIVNVTIQDVNDNQPIFNQSRYFATVPENATVGTSIFQVFATDADAGSNGEVEYSINRR 305 (483)
Q Consensus 246 ~~~v~I~V~dvNd~~P~f~~~~~~~~v~E~~~~gt~v~~v~a~D~D~~~~~~i~y~i~~~ 305 (483)
.+.+.+.|.| ||..+.|.-..-...|.|+. |+.-.+|.-+-.+.+....+.|.....
T Consensus 9 ~~~~~~~i~d-dd~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dG 65 (160)
T 3gin_A 9 SAALEVLFQG-PGPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDG 65 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEES
T ss_pred cceEEEEEec-CCCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECC
Confidence 3456777777 45566666555556789985 666666655545543355788987653
No 78
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=38.33 E-value=2.5e+02 Score=26.07 Aligned_cols=57 Identities=14% Similarity=0.120 Sum_probs=32.7
Q ss_pred eEEEEEEEecCCCCCCccCCCceEEEEeCCCCCCeEEEEEEEEeCCCCCCceEEEEEEeCC
Q psy8629 134 NVRVVVRVIDENDNAPTFPSPFMSIEFPENTPRDVKRTLNAAKDRDLGIYNTQRYNIVSGN 194 (483)
Q Consensus 134 ~~~v~I~V~DvND~~P~f~~~~~~~~V~E~~~~gt~v~~v~a~D~D~~~~~~~~y~l~~~~ 194 (483)
....+|+|.| ||++|.|....-...|.|+. |.....|.-+ .+....-.+.|....|.
T Consensus 127 ~~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V~Rs-~~~~g~VtV~y~T~~GT 183 (295)
T 3us9_A 127 PSTATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKVLRT-SGARGNVIVPYKTIEGT 183 (295)
T ss_dssp CCEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEEEEE-SCCCSCEEEEEEEECCS
T ss_pred CceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEEEEE-cCCCccEEEEEEecCCC
Confidence 3456777776 47788865555568899985 4444444332 22222235667665543
No 79
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=31.41 E-value=1.7e+02 Score=22.15 Aligned_cols=29 Identities=10% Similarity=0.101 Sum_probs=21.1
Q ss_pred CCEEEEEEEEEECCCCCeeeEEEEEEEEEe
Q psy8629 226 IPEYSLVIEALDGGSPPLRGSMIVNVTIQD 255 (483)
Q Consensus 226 ~~~~~l~v~a~D~g~p~~~~~~~v~I~V~d 255 (483)
...|.|+++|+|..+- ......+.|+|.+
T Consensus 60 ~G~htl~a~AtD~~G~-~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDA-ASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCC-BCCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCC-EEeeeEEEEEECc
Confidence 4789999999997663 2335667777764
Done!