BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy863
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99758|ABCA3_HUMAN ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3
PE=1 SV=2
Length = 1704
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Query: 21 DSIRLLATYFPGYAMICGFKLLGNFEANGAGYQLTFLTSDDIQVSAITDLIQSHVPDASL 80
D I ++A G CG L + GAGY +T + I+ L+ HVP+A+L
Sbjct: 731 DRIAIMAK---GELQCCGSSLFLK-QKYGAGYHMTLVKEPHCNPEDISQLVHHHVPNATL 786
Query: 81 HNTQSSQITYTLPTQDTSPFPALFATLEEKKSALGISSIGIACTTIEEVFLKVGDL 136
++ +++++ LP + T F LFA LE+K+ LGI+S G + TT+EEVFL+VG L
Sbjct: 787 ESSAGAELSFILPRESTHRFEGLFAKLEKKQKELGIASFGASITTMEEVFLRVGKL 842
>sp|Q8R420|ABCA3_MOUSE ATP-binding cassette sub-family A member 3 OS=Mus musculus GN=Abca3
PE=2 SV=3
Length = 1704
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 21 DSIRLLATYFPGYAMICGFKLLGNFEANGAGYQLTFLTSDDIQVSAITDLIQSHVPDASL 80
D I +LA G CG L + GAGY +T + I+ L+ HVP+A L
Sbjct: 731 DRIAILAK---GELQCCGSSLFLK-QKYGAGYHMTLVKEPHCNPEGISQLVHHHVPNAML 786
Query: 81 HNTQSSQITYTLPTQDTSPFPALFATLEEKKSALGISSIGIACTTIEEVFLKVGDL 136
+ +++++ LP + T F +LFA LE+K+ LGI+S G + TT+EEVFL+VG L
Sbjct: 787 ESHAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVGKL 842
>sp|Q8WWZ4|ABCAA_HUMAN ATP-binding cassette sub-family A member 10 OS=Homo sapiens
GN=ABCA10 PE=2 SV=3
Length = 1543
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY L+ ++ IT LI+ H+PDA L ++ Y+LP + T+ FP L++ L
Sbjct: 618 GIGYHLSLHRNEMCDTEKITSLIKQHIPDAKLTTESEEKLVYSLPLEKTNKFPDLYSDL- 676
Query: 109 EKKSALGISSIGIACTTIEEVFLKVG----------DLASKEKIESVDAKSKRSTLEQV 157
+K S GI + ++ T++ EVFL + D+ +EKI S +EQV
Sbjct: 677 DKCSDQGIRNYAVSVTSLNEVFLNLEGKSAIDEPDFDIGKQEKIHVTRNTGDESEMEQV 735
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G Y L + QV A+ I P A+ SS + Y LP +D P F LE
Sbjct: 1432 GRDYLLEIKMKEPTQVEALHTEILKLFPQAAWQERYSSLMAYKLPVEDVHPLSRAFFKLE 1491
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAK 148
K + ++ T+E+VFL +L ++++ +VD K
Sbjct: 1492 AMKQTFNLEEYSLSQATLEQVFL---ELCKEQELGNVDDK 1528
>sp|Q8K442|ABC8A_MOUSE ATP-binding cassette sub-family A member 8-A OS=Mus musculus
GN=Abca8a PE=2 SV=2
Length = 1620
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY L+ S+ IT L++ H+PD+ L +++Y LP + T+ FP L+ L
Sbjct: 705 GIGYHLSLQLSETCVHERITSLVKQHIPDSKLSAESEGKLSYILPLERTNKFPDLYRDL- 763
Query: 109 EKKSALGISSIGIACTTIEEVFLKV--------GDLASKEKIESVDAKS 149
E+ LGI + G++ TT+ EVFLK+ D+ E +++ A+S
Sbjct: 764 ERSPDLGIENYGVSITTLTEVFLKLEGKSSIDQSDIGMTEDVQAGGARS 812
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G Y L QV + I P A+ SS + Y LP +D P F LE
Sbjct: 1509 GKEYLLEMKVKTPSQVEPLNTEIMRLFPQAARQERYSSLMVYKLPREDVQPLSQAFFKLE 1568
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEK 141
K + + ++ +T+E+VFL++ SKE+
Sbjct: 1569 TVKQSFDLEEYSLSQSTLEQVFLEL----SKEQ 1597
>sp|P41233|ABCA1_MOUSE ATP-binding cassette sub-family A member 1 OS=Mus musculus GN=Abca1
PE=1 SV=4
Length = 2261
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 10/112 (8%)
Query: 62 IQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQ--DTSPFPALFATLEEKKSALGISSI 119
I VSAI++LI+ HV +A L ++TY LP + F LF ++++ S LGISS
Sbjct: 1178 IDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSY 1237
Query: 120 GIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNGES--NKEPLLH 169
GI+ TT+EE+FLKV + + VDA++ TL N + +K+ LH
Sbjct: 1238 GISETTLEEIFLKVAEES------GVDAETSDGTLPARRNRRAFGDKQSCLH 1283
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 3 LWCILLIIVP----IHVTSNTRDSIRLLATYFPGYAMICG-FKLLGNFE----ANGAGYQ 53
LW L IV + +TS++ + L T M+ G F+ LG+ + G GY
Sbjct: 2083 LWNCALSIVKEGRSVVLTSHSMEECEALCTRMA--IMVNGRFRCLGSVQHLKNRFGDGYT 2140
Query: 54 LTF-LTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLEEKKS 112
+ + + + + + P + L + + Y LP+ S +F+ L + K
Sbjct: 2141 IVVRIAGSNPDLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPSS-LSSLARIFSILSQSKK 2199
Query: 113 ALGISSIGIACTTIEEVFL 131
L I ++ TT+++VF+
Sbjct: 2200 RLHIEDYSVSQTTLDQVFV 2218
>sp|Q8CF82|ABCA5_RAT ATP-binding cassette sub-family A member 5 OS=Rattus norvegicus
GN=Abca5 PE=2 SV=1
Length = 1642
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY+L+ +++ L++ H+P A+L QI Y+LP +D F LF+ L
Sbjct: 705 GIGYRLSMYIDRYCATESLSSLVRQHIPAAALLQQNDQQIVYSLPFKDMDKFSGLFSAL- 763
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNGESNKEPLL 168
+ S LG+ S G++ TT+E+VFLK+ ++E+ ++ S Q P E
Sbjct: 764 DIHSNLGVISYGVSMTTLEDVFLKL-------EVEAEIDQADYSVFTQQPREEETDSKSF 816
Query: 169 HQKVQGVLFL 178
+ Q +L L
Sbjct: 817 DEMEQSLLIL 826
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 49 GAGYQLTFLTSD---DIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFA 105
G GY L D ++++ + IQ P+AS + SS + Y +P +D FA
Sbjct: 1525 GKGYFLEIKLKDWIENLEIDRLQREIQYIFPNASRQESFSSILAYKIPKEDVQSLSQSFA 1584
Query: 106 TLEEKKSALGISSIGIACTTIEEVFLKVGDLASKE 140
LEE K I + T+E+VF+++ +E
Sbjct: 1585 KLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEE 1619
>sp|Q8K448|ABCA5_MOUSE ATP-binding cassette sub-family A member 5 OS=Mus musculus GN=Abca5
PE=1 SV=2
Length = 1642
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY+L+ +++ L++ H+P A+L Q+ Y+LP +D F LF+ L
Sbjct: 705 GIGYRLSMYIDRYCATESLSSLVRQHIPAAALLQQNDQQLVYSLPFKDMDKFSGLFSAL- 763
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNGESNKEPLL 168
+ S LG+ S G++ TT+E+VFLK+ ++E+ ++ S Q P E
Sbjct: 764 DIHSNLGVISYGVSMTTLEDVFLKL-------EVEAEIDQADYSVFTQQPREEETDSKSF 816
Query: 169 HQKVQGVLFL 178
+ Q +L L
Sbjct: 817 DEMEQSLLIL 826
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 49 GAGYQLTFLTSD---DIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFA 105
G GY L D ++++ + IQ P+AS + SS + + +P +D FA
Sbjct: 1525 GKGYFLEIKLKDWIENLEIDRLQREIQYIFPNASRQESFSSILAFKIPKEDVQSLSQSFA 1584
Query: 106 TLEEKKSALGISSIGIACTTIEEVFLKVGDLASKE 140
LEE K I + T+E+VF+++ +E
Sbjct: 1585 KLEEAKRTFAIEEYSFSQATLEQVFVELTKEQEEE 1619
>sp|O94911|ABCA8_HUMAN ATP-binding cassette sub-family A member 8 OS=Homo sapiens GN=ABCA8
PE=1 SV=3
Length = 1581
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 11/119 (9%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY L+ ++ IT L++ H+PDA L ++ YTLP + T+ FP L+ L+
Sbjct: 667 GIGYHLSLQLNEICVEENITSLVKQHIPDAKLSAKSEGKLIYTLPLERTNKFPELYKDLD 726
Query: 109 EKKSALGISSIGIACTTIEEVFLKV--------GDLA--SKEKIESVDAKSKRSTLEQV 157
LGI + G++ TT+ EVFLK+ D+A + + E D + +EQV
Sbjct: 727 SYPD-LGIENYGVSMTTLNEVFLKLEGKSTINESDIAILGEVQAEKADDTERLVEMEQV 784
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G Y L + QV + I P A+ SS + Y LP +D P F LE
Sbjct: 1470 GKDYLLEMKVKNLAQVEPLHAEILRLFPQAARQERYSSLMVYKLPVEDVQPLAQAFFKLE 1529
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEK 141
+ K + + ++ +T+E+VFL++ SKE+
Sbjct: 1530 KVKQSFDLEEYSLSQSTLEQVFLEL----SKEQ 1558
>sp|Q8T6J2|ABCA5_DICDI ABC transporter A family member 5 OS=Dictyostelium discoideum
GN=abcA5 PE=3 SV=1
Length = 1662
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 49 GAGYQLT----FLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALF 104
G GY LT T D V +T I+ +PD ++ + S+I++ LPT F F
Sbjct: 731 GVGYLLTCSKSLNTIDQFNVDQVTQFIRDQIPDVTVLSNAGSEISFRLPTASLPVFSKFF 790
Query: 105 ATLEEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQ 156
+E S I S GI+ TT+EEVFLK+G + + D L++
Sbjct: 791 KDFDENLSNFHIDSYGISVTTLEEVFLKIGTDIDTDALSIADGNGNDDELKR 842
>sp|O95477|ABCA1_HUMAN ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1
PE=1 SV=3
Length = 2261
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 8/100 (8%)
Query: 62 IQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQ--DTSPFPALFATLEEKKSALGISSI 119
I VSAI++LI+ HV +A L ++TY LP + F LF ++++ S LGISS
Sbjct: 1178 IDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSY 1237
Query: 120 GIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPN 159
GI+ TT+EE+FLKV + + VDA++ TL N
Sbjct: 1238 GISETTLEEIFLKVAEES------GVDAETSDGTLPARRN 1271
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 3 LWCILLIIVP----IHVTSNTRDSIRLLATYFPGYAMICG-FKLLGNFE----ANGAGYQ 53
LW L +V + +TS++ + L T M+ G F+ LG+ + G GY
Sbjct: 2083 LWNCALSVVKEGRSVVLTSHSMEECEALCTRMA--IMVNGRFRCLGSVQHLKNRFGDGYT 2140
Query: 54 LTF-LTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLEEKKS 112
+ + + + + D P + L + + Y LP+ S +F+ L + K
Sbjct: 2141 IVVRIAGSNPDLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPSS-LSSLARIFSILSQSKK 2199
Query: 113 ALGISSIGIACTTIEEVFL 131
L I ++ TT+++VF+
Sbjct: 2200 RLHIEDYSVSQTTLDQVFV 2218
>sp|Q8WWZ7|ABCA5_HUMAN ATP-binding cassette sub-family A member 5 OS=Homo sapiens GN=ABCA5
PE=2 SV=2
Length = 1642
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY+L+ +++ L++ H+P A+L Q+ Y+LP +D F LF+ L+
Sbjct: 705 GIGYRLSMYIDKYCATESLSSLVKQHIPGATLLQQNDQQLVYSLPFKDMDKFSGLFSALD 764
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNGESNKEPLL 168
S LG+ S G++ TT+E+VFLK+ ++E+ ++ S Q P E
Sbjct: 765 S-HSNLGVISYGVSMTTLEDVFLKL-------EVEAEIDQADYSVFTQQPLEEEMDSKSF 816
Query: 169 HQKVQGVLFL 178
+ Q +L L
Sbjct: 817 DEMEQSLLIL 826
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 49 GAGYQLTFLTSD---DIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFA 105
G GY L D +++V + IQ P+AS + SS + Y +P +D F
Sbjct: 1525 GKGYFLEIKLKDWIENLEVDRLQREIQYIFPNASRQESFSSILAYKIPKEDVQSLSQSFF 1584
Query: 106 TLEEKKSALGISSIGIACTTIEEVFLKVGDLASKE 140
LEE K A I + T+E+VF+++ +E
Sbjct: 1585 KLEEAKHAFAIEEYSFSQATLEQVFVELTKEQEEE 1619
>sp|Q8N139|ABCA6_HUMAN ATP-binding cassette sub-family A member 6 OS=Homo sapiens GN=ABCA6
PE=1 SV=2
Length = 1617
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY L+ ++ IT I H+PDA L ++ YTLP + T+ FP LF+ L
Sbjct: 705 GLGYHLSLHRNEICNPEQITSFITHHIPDAKLKTENKEKLVYTLPLERTNTFPDLFSDL- 763
Query: 109 EKKSALGISSIGIACTTIEEVFLKV-GDLASKEKIESVDAKSKRSTLEQV 157
+K S G++ I+ +T+ EVF+K+ G ++ E V+ +L ++
Sbjct: 764 DKCSDQGVTGYDISMSTLNEVFMKLEGQSTIEQDFEQVEMIRDSESLNEM 813
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G Y L + QV+ + I P A+ SS +TY LP D P F LE
Sbjct: 1505 GKDYILELKVKETSQVTLVHTEILKLFPQAAGQERYSSLLTYKLPVADVYPLSQTFHKLE 1564
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAK 148
K + ++ T+E+VFL +L+ ++++ + D +
Sbjct: 1565 AVKHNFNLEEYSLSQCTLEKVFL---ELSKEQEVGNFDEE 1601
>sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9
PE=1 SV=1
Length = 1624
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY L+ ++ +IT L++ H+ DA L ++ Y LP + T+ FP L+ L
Sbjct: 708 GIGYHLSLHLNERCDPESITSLVKQHISDAKLTAQSEEKLVYILPLERTNKFPELYRDL- 766
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVD 146
++ S GI G++ TT+ EVFLK L K I+ D
Sbjct: 767 DRCSNQGIEDYGVSITTLNEVFLK---LEGKSTIDESD 801
Score = 38.1 bits (87), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G Y L + Q+ + I P A+ SS + Y LP +D P F LE
Sbjct: 1513 GKDYLLEMKLKNLAQMEPLHAEILRLFPQAAQQERFSSLMVYKLPVEDVRPLSQAFFKLE 1572
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEK 141
K + + ++ +T+E+VFL++ SKE+
Sbjct: 1573 IVKQSFDLEEYSLSQSTLEQVFLEL----SKEQ 1601
>sp|Q8T6J5|ABCA2_DICDI ABC transporter A family member 2 OS=Dictyostelium discoideum
GN=abcA2 PE=3 SV=1
Length = 1621
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 49 GAGYQLT---FLTS-DDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALF 104
G GY LT L+S ++ +T+ I +++P+A++ + ++++Y LPT F F
Sbjct: 709 GCGYLLTCSKILSSMNNFNAQQVTEFIHNYIPEATILSNAGTELSYRLPTASLPHFAQFF 768
Query: 105 ATLEEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQV 157
+++ + G+ + GI+ TT+EEVFL +G A+ EK +++ LEQ+
Sbjct: 769 REFDDRLQSFGLLTYGISVTTLEEVFLSLGREAALEKGGFNIDQNENQDLEQL 821
>sp|Q8K449|ABCA9_MOUSE ATP-binding cassette sub-family A member 9 OS=Mus musculus GN=Abca9
PE=1 SV=2
Length = 1623
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY L+ ++ IT L++ H+ DA L ++ Y LP + T+ FP L+ L
Sbjct: 708 GIGYHLSLHLNEACDPEGITSLVKKHISDARLTTQSEERLVYILPLERTNKFPDLYRDL- 766
Query: 109 EKKSALGISSIGIACTTIEEVFLKV 133
++ S GI G++ TT+ EVFLK+
Sbjct: 767 DRCSNQGIEDYGVSMTTLNEVFLKL 791
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G Y L QV + I P A+ SS + Y LP +D P F LE
Sbjct: 1512 GKDYLLEMKVKTPSQVEPLNTEIMRLFPQAARQERYSSLMVYKLPVEDVRPLSEAFFKLE 1571
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEK 141
K + ++ +T+E+VFL++ SKE+
Sbjct: 1572 RLKENFDLEEYSLSQSTLEQVFLEL----SKEQ 1600
>sp|Q555Z5|ABCA4_DICDI ABC transporter A family member 4 OS=Dictyostelium discoideum
GN=abcA4 PE=3 SV=1
Length = 1615
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 49 GAGYQLTFLT-----SDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPAL 103
G GY LT ++ I+D+I +H+P SL + +++ + LP + F L
Sbjct: 719 GVGYLLTISKEHNSINNSNLTKTISDIIFNHIPKGSLLSDAGTELCFRLPNESIGNFSNL 778
Query: 104 FATLEEKKSALGISSIGIACTTIEEVFLKV 133
F L+++K L I + GI+ TT+EEVFLK+
Sbjct: 779 FKELDDRKKQLSIENYGISITTLEEVFLKI 808
>sp|Q8K440|ABC8B_MOUSE ATP-binding cassette sub-family A member 8-B OS=Mus musculus
GN=Abca8b PE=2 SV=2
Length = 1620
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY L+ + IT L++ H+P A L ++ YTLP + T FP L +L+
Sbjct: 706 GVGYHLSLQLKEVCVPENITSLVKQHIPAAKLSAEGEGKLLYTLPLETTYRFPELCQSLD 765
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEKIE 143
LGI + G++ TT+ EVFLK+ AS ++ E
Sbjct: 766 S-CPGLGIENYGVSMTTLNEVFLKLEGKASIDEPE 799
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G Y L QV + I P AS SS + Y LP + P F LE
Sbjct: 1508 GKDYLLEMKVKTLEQVEPLNTEILRLFPQASRQERYSSLMAYKLPVEAVQPLSQAFFKLE 1567
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEK 141
+ K + ++ +T+E+VFL++ SKE+
Sbjct: 1568 KVKQTFDLEEYSLSQSTLEQVFLEL----SKEQ 1596
>sp|Q8K441|ABCA6_MOUSE ATP-binding cassette sub-family A member 6 OS=Mus musculus GN=Abca6
PE=2 SV=2
Length = 1624
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY L+ + +T I H+P A L ++ Y LP + TS FP F+ L
Sbjct: 705 GLGYHLSLFMDETCDSERLTSFINHHIPYAKLKAKTKEKLVYILPLERTSEFPEFFSDL- 763
Query: 109 EKKSALGISSIGIACTTIEEVFLKV-GDLASKEKIESVDAKSKRSTLEQV 157
+K S G+ S ++ +T+ +VFL + G+ ++K+ E + + +L +
Sbjct: 764 DKYSGQGLMSYEVSMSTLNDVFLNLEGEPSTKQDFEKRETATDSESLNDM 813
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G Y L D Q + I P A+ + S +TY LP D P F LE
Sbjct: 1512 GQDYVLELRVKDVSQEPLVHREILKLFPQAARQDRCFSLLTYKLPVTDVHPLSQAFHKLE 1571
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEK 141
K + ++ T++ V L++ SKE+
Sbjct: 1572 AVKHGFDLEDYSLSQCTLDRVILEL----SKEQ 1600
>sp|Q8T6J1|ABCA6_DICDI ABC transporter A family member 6 OS=Dictyostelium discoideum
GN=abcA6 PE=3 SV=1
Length = 1631
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 49 GAGYQLTFL-----TSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPAL 103
G GY LT S+ + +++ I++ +P AS+ ++++Y LPT+ S FP
Sbjct: 716 GQGYLLTCNKKLENASNGFNTNQVSEFIKNFIPGASILTDSGAELSYRLPTESLSNFPQF 775
Query: 104 FATLEEKKSALGISSIGIACTTIEEVFLKVGDLASKE 140
F + S I + GI+ T++EEVF+ +G SK+
Sbjct: 776 FTEFDLNLSKFSIQTYGISVTSLEEVFISLGQEDSKK 812
>sp|O35600|ABCA4_MOUSE Retinal-specific ATP-binding cassette transporter OS=Mus musculus
GN=Abca4 PE=2 SV=1
Length = 2310
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 61 DIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQD--TSPFPALFATLEEKKSALGISS 118
D V + DL+ HVP+A L ++ + LP ++ + +LF LEE + LG+SS
Sbjct: 1202 DGDVQELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSS 1261
Query: 119 IGIACTTIEEVFLKVGDLASKEKIESVDAKSKR 151
GI+ T +EE+FLKV + A + A+ KR
Sbjct: 1262 FGISDTPLEEIFLKVTEDAGAGSMFVGGAQQKR 1294
>sp|Q86UQ4|ABCAD_HUMAN ATP-binding cassette sub-family A member 13 OS=Homo sapiens GN=ABCA13
PE=2 SV=3
Length = 5058
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 46 EANGAGYQLTF------LTSDDIQ-VSAITDLIQSHVPDASLHNTQSSQITYTLPTQ-DT 97
EA G G +LT L + D++ ++ +T LI+ ++P A L ++ S++TYT+P D
Sbjct: 4063 EAYGQGLRLTLTRQPSVLEAHDLKDMACVTSLIKIYIPQAFLKDSSGSELTYTIPKDTDK 4122
Query: 98 SPFPALFATLEEKKSALGISSIGIACTTIEEVFL 131
+ LF L+E L ++ GI+ TT+EEVFL
Sbjct: 4123 ACLKGLFQALDENLHQLHLTGYGISDTTLEEVFL 4156
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Query: 15 VTSNTRDSIRLLATYFPGYAMICG-FKLLGNFE----ANGAGYQL-TFLTSDDIQVSAIT 68
+TS++ + L T M+ G FK LG+ + G GY + +L + Q ++
Sbjct: 4911 LTSHSMEECEALCTRLA--IMVNGSFKCLGSPQHIKNRFGDGYTVKVWLCKEANQHCTVS 4968
Query: 69 DLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLEEKKSALGISSIGIACTTIEE 128
D ++ + P + + Y +P + LF +E K+ L I I TT+E+
Sbjct: 4969 DHLKLYFPGIQFKGQHLNLLEYHVPKR-WGCLADLFKVIENNKTFLNIKHYSINQTTLEQ 5027
Query: 129 VFLKVGDLASKEKIESVDAKSKRSTLEQVP 158
VF+ + ++D + +P
Sbjct: 5028 VFINFASEQQQTLQSTLDPSTDSHHTHHLP 5057
>sp|Q9ESR9|ABCA2_RAT ATP-binding cassette sub-family A member 2 OS=Rattus norvegicus
GN=Abca2 PE=1 SV=1
Length = 2434
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 67 ITDLIQSHVPDASLHNTQSSQITYTLPTQ--DTSPFPALFATLEEKKSALGISSIGIACT 124
++ I+ HV + L + S++++Y LP++ F LF LE AL +SS G+ T
Sbjct: 1253 VSQFIRKHVASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSFGLMDT 1312
Query: 125 TIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNGE 161
T+EEVFLKV + + +E+ +A K S + +P E
Sbjct: 1313 TLEEVFLKVSE--EDQSLENSEADVKESRKDALPGAE 1347
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLE 108
G GY +T T V + + P+A L +++ Y L ++ S +F+ +E
Sbjct: 2278 GDGYMITVRTKSSQNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKME 2336
Query: 109 EKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAK 148
LGI ++ TT++ VF+ S + +E +A+
Sbjct: 2337 HVVGVLGIEDYSVSQTTLDNVFVNFAKKQS-DNVEQQEAE 2375
>sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette transporter OS=Homo sapiens
GN=ABCA4 PE=1 SV=3
Length = 2273
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 61 DIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQD--TSPFPALFATLEEKKSALGISS 118
D V+ + D++ HVP+A L ++ + LP ++ + +LF LEE + LG+SS
Sbjct: 1202 DGDVNELMDVVLHHVPEAKLVECIGQELIFLLPNKNFKHRAYASLFRELEETLADLGLSS 1261
Query: 119 IGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTL 154
GI+ T +EE+FLKV + + + + A+ KR +
Sbjct: 1262 FGISDTPLEEIFLKVTEDSDSGPLFAGGAQQKRENV 1297
>sp|Q86UK0|ABCAC_HUMAN ATP-binding cassette sub-family A member 12 OS=Homo sapiens GN=ABCA12
PE=1 SV=3
Length = 2595
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 46 EANGAGYQLTFLT--SDDIQVSAITD------LIQSHVPDASLHNTQSSQITYTLP---T 94
EA G GY LT S ++ +A+ D +IQSH+P+A L ++ Y LP T
Sbjct: 1566 EAFGDGYHLTLTKKKSPNLNANAVCDTMAVTAMIQSHLPEAYLKEDIGGELVYVLPPFST 1625
Query: 95 QDTSPFPALFATLEEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTL 154
+ + + +L L+ L I GI+ TT+EEVFL + + K S++ +++
Sbjct: 1626 KVSGAYLSLLRALDNGMGDLNIGCYGISDTTVEEVFLNLTKESQKNSAMSLEHLTQKKIG 1685
Query: 155 EQVPNGESNKEPL 167
NG S + L
Sbjct: 1686 NSNANGISTPDDL 1698
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 49 GAGYQL-TFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATL 107
G G+ + L ++ + + +T +Q H P L + S + Y +P +F L
Sbjct: 2481 GRGFTVKVHLKNNKVTMETLTKFMQLHFPKTYLKDQHLSMLEYHVPVT-AGGVANIFDLL 2539
Query: 108 EEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTL 154
E K+AL I++ ++ TT+EEVF+ ++ E+ D S+ ST+
Sbjct: 2540 ETNKTALNITNFLVSQTTLEEVFINFA--KDQKSYETADTSSQGSTI 2584
>sp|P41234|ABCA2_MOUSE ATP-binding cassette sub-family A member 2 OS=Mus musculus GN=Abca2
PE=1 SV=4
Length = 2434
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 67 ITDLIQSHVPDASLHNTQSSQITYTLPTQ--DTSPFPALFATLEEKKSALGISSIGIACT 124
++ I+ HV + L + S++++Y LP++ F LF LE AL +SS G+ T
Sbjct: 1253 VSQFIRKHVASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSFGLMDT 1312
Query: 125 TIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNGE 161
T+EEVFLKV + + +E+ +A K S + +P E
Sbjct: 1313 TLEEVFLKVSE--EDQSLENSEADVKESRKDVLPGAE 1347
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 3 LWCILLIIVP----IHVTSNTRDSIRLLATYFPGYAMICG-FKLLGNFE----ANGAGYQ 53
LW ++L ++ + +TS++ + L T M+ G + LG+ + G GY
Sbjct: 2225 LWNLILDLIKTGRSVVLTSHSMEECEALCTRLA--IMVNGRLRCLGSIQHLKNRFGDGYM 2282
Query: 54 LTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLEEKKSA 113
+T T V + + P+A L +++ Y L ++ S +F+ +E+
Sbjct: 2283 ITVRTKSSQNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKMEQVVGV 2341
Query: 114 LGISSIGIACTTIEEVFLKVGDLASKEKIESVDAK 148
LGI ++ TT++ VF+ S + +E +A+
Sbjct: 2342 LGIEDYSVSQTTLDNVFVNFAKKQS-DNVEQQEAE 2375
>sp|Q9BZC7|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2
PE=1 SV=3
Length = 2435
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 67 ITDLIQSHVPDASLHNTQSSQITYTLPTQ--DTSPFPALFATLEEKKSALGISSIGIACT 124
++ I+ HV L + S++++Y LP++ F LF LE AL +SS G+ T
Sbjct: 1253 VSQFIRKHVASCLLVSDTSTELSYILPSEAAKKGAFERLFQHLERSLDALHLSSFGLMDT 1312
Query: 125 TIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNGE 161
T+EEVFLKV + + +E+ +A K S + +P E
Sbjct: 1313 TLEEVFLKVSE--EDQSLENSEADVKESRKDVLPGAE 1347
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 3 LWCILLIIVP----IHVTSNTRDSIRLLATYFPGYAMICG-FKLLGNFE----ANGAGYQ 53
LW ++L ++ + +TS++ + L T M+ G + LG+ + G GY
Sbjct: 2224 LWNLILDLIKTGRSVVLTSHSMEECEALCTRLA--IMVNGRLRCLGSIQHLKNRFGDGYM 2281
Query: 54 LTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLEEKKSA 113
+T T V + + P+A L +++ Y L ++ S +F+ +E+
Sbjct: 2282 ITVRTKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKMEQVSGV 2340
Query: 114 LGISSIGIACTTIEEVFLK 132
LGI ++ TT++ VF+
Sbjct: 2341 LGIEDYSVSQTTLDNVFVN 2359
>sp|Q91V24|ABCA7_MOUSE ATP-binding cassette sub-family A member 7 OS=Mus musculus GN=Abca7
PE=1 SV=1
Length = 2159
Score = 50.4 bits (119), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 67 ITDLIQSHVPDASLHNTQSSQITYTLPTQDT--SPFPALFATLEEKKSALGISSIGIACT 124
I +L+Q HVP A L ++ LP F +F L+++ LG++ GI+ T
Sbjct: 1096 ILELVQQHVPGAQLVEDLPHELLLVLPYAGALDGSFAMVFQELDQQLELLGLTGYGISDT 1155
Query: 125 TIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNG 160
+EE+FLKV + A +E +S R+ Q P G
Sbjct: 1156 NLEEIFLKVVEDAHREGGDSRPQLHLRTCTPQPPTG 1191
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 3 LWCILLIIV----PIHVTSNTRDSIRLLATYFPGYAMICG-FKLLGNFE----ANGAGYQ 53
LW LL +V + +TS++ + L T M+ G F+ LG+ + GAG+
Sbjct: 1978 LWNSLLSVVREGRSVVLTSHSMEECEALCTRLA--IMVNGRFRCLGSSQHLKGRFGAGHT 2035
Query: 54 LTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLEEKKSA 113
LT D AI I+ P A L S++ + LP +F L + A
Sbjct: 2036 LTLRVPPDQPEPAIA-FIRITFPGAELREVHGSRLRFQLPPGGRCTLTRVFRELAAQGRA 2094
Query: 114 LGISSIGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQV 157
G+ ++ TT+EEVFL SK++ E ++ + + E+V
Sbjct: 2095 HGVEDFSVSQTTLEEVFLYF----SKDQGEEEESSRQEAEEEEV 2134
>sp|Q84M24|AB1A_ARATH ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1
PE=2 SV=2
Length = 1882
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 49 GAGYQLTFL-TSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATL 107
G GY LT + TS + V+A ++ H+P A+ + ++I++ LP F +F +
Sbjct: 774 GVGYTLTLVKTSPTVSVAA--HIVHRHIPSATCVSEVGNEISFKLPLASLPCFENMFREI 831
Query: 108 E---------------EKKSALGISSIGIACTTIEEVFLKVG----DLASKEKIESVDAK 148
E E GI S GI+ TT+EEVFL+V D+ K++ V
Sbjct: 832 ESCMKNSVDRSKISEIEDSDYPGIQSYGISVTTLEEVFLRVAGCNLDIEDKQEDIFVSPD 891
Query: 149 SKRSTLEQVPNGESNKEPLL 168
+K S + N +S+ +P L
Sbjct: 892 TKSSLVCIGSNQKSSMQPKL 911
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 63 QVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTS-PFPALFATLEEKKSALGISSIGI 121
+ SA+ IQS P A+ + I Y LP + F LE ++ LGI+ I
Sbjct: 1807 KFSALDSFIQSSFPGATFKSCNGLSIKYQLPFGEGGLSLADAFGHLERNRNRLGIAEYSI 1866
Query: 122 ACTTIEEVF 130
+ +T+E +F
Sbjct: 1867 SQSTLETIF 1875
>sp|Q5SSE9|ABCAD_MOUSE ATP-binding cassette sub-family A member 13 OS=Mus musculus GN=Abca13
PE=2 SV=1
Length = 5034
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 58 TSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQ-DTSPFPALFATLEEKKSALGI 116
T + V+ +T LIQ ++P A L ++ ++TYT+P D + F L L++ L +
Sbjct: 4050 TQEPKDVARVTSLIQIYIPQAFLKDSCGGELTYTIPKDADRTCFKGLCQALDQNLQHLHL 4109
Query: 117 SSIGIACTTIEEVFLKVGDLASKEKIESVDAK 148
+ GI+ TT+EEVFL + +K+ + D K
Sbjct: 4110 TGYGISDTTLEEVFLMLLQDTNKKSYITPDNK 4141
Score = 37.4 bits (85), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 49 GAGYQL-TFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATL 107
G GY + +L + Q SA++D ++ H P + + + Y + + LF L
Sbjct: 4923 GDGYTVKVWLHKEGSQPSAVSDCLKLHFPGIQFKGQRLNLLEYHV-QKSWECLADLFKVL 4981
Query: 108 EEKKSALGISSIGIACTTIEEVFLK 132
E KS L I I+ TT+E+VF+
Sbjct: 4982 ENNKSLLNIEHYSISQTTLEQVFVN 5006
>sp|Q54BT5|ABCA3_DICDI ABC transporter A family member 3 OS=Dictyostelium discoideum
GN=abcA3 PE=3 SV=1
Length = 1702
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 49 GAGYQLTFLT-SDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATL 107
G GY LT S + ++ ++ ++ A + + ++++ LP + F F L
Sbjct: 727 GVGYLLTITKKSTEFNKDSVMEITNKYIKQAHILSDAGTELSIRLPMESLPMFSQYFKHL 786
Query: 108 EEKKSALGISSIGIACTTIEEVFLKVG 134
E+ K+ L I S GI+ +T+EEVFLK+G
Sbjct: 787 EDCKNQLLIDSYGISISTLEEVFLKIG 813
>sp|Q7TNJ2|ABCA7_RAT ATP-binding cassette sub-family A member 7 OS=Rattus norvegicus
GN=Abca7 PE=1 SV=1
Length = 2170
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 67 ITDLIQSHVPDASLHNTQSSQITYTLP---TQDTSPFPALFATLEEKKSALGISSIGIAC 123
I +L+Q HVP A L ++ LP D S F +F L+++ LG++ GI+
Sbjct: 1097 ILELVQRHVPGAQLVEELPHELVLALPYAGALDGS-FATVFQELDQQLERLGLTGYGISD 1155
Query: 124 TTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNGESNKE 165
T +EE+FLKV + A E D + ++ L P + E
Sbjct: 1156 TNLEEIFLKVVEEAHAHG-EGGDPRQQQHLLTATPQPHTGPE 1196
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 3 LWCILLIIV----PIHVTSNTRDSIRLLATYFPGYAMICG-FKLLGNFE----ANGAGYQ 53
LW LL +V + +TS++ + L T M+ G F+ LG+ + GAG+
Sbjct: 1989 LWNNLLSVVREGRSVVLTSHSMEECEALCTRL--AIMVNGRFRCLGSAQHLKSRFGAGHT 2046
Query: 54 LTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLEEKKSA 113
LT D AI I + PDA L S++ + LP +F L + A
Sbjct: 2047 LTLRVPPDQPEPAIA-FIVTTFPDAELREVHGSRLRFQLPPGGGCTLARVFRELAAQGKA 2105
Query: 114 LGISSIGIACTTIEEVFL 131
G+ ++ TT+EEVFL
Sbjct: 2106 HGVEDFSVSQTTLEEVFL 2123
>sp|Q552P3|ABCAB_DICDI ABC transporter A family member 11 OS=Dictyostelium discoideum
GN=abcA11 PE=3 SV=1
Length = 834
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 49 GAGYQLTFLTSDDIQVS-AITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATL 107
G+GY + + ++ + S I + + P+A+ I+Y LP+Q+ +F L
Sbjct: 685 GSGYTIDIIPNNYLNNSYEIHNFMAQTFPNATRVERLGRFISYDLPSQNQQSLSTIFRIL 744
Query: 108 EEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDAKSK 150
+ K L I + +++E+VFLK +L + + + KS
Sbjct: 745 QSNKQRLQILDFSASSSSLEKVFLKFANLQEEINKQQTNNKSN 787
>sp|Q9FKF2|AB11A_ARATH ABC transporter A family member 11 OS=Arabidopsis thaliana
GN=ABCA11 PE=3 SV=1
Length = 953
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 88 ITYTLPTQDTSPFPALFATLEEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDA 147
+T+ +P + F L+ ++S GIS I + T+EEVFL ++A + ++ES A
Sbjct: 803 MTFVIPHDKENLLTGFFEELQNRESEFGISDIQLGLATLEEVFL---NIARQAELESATA 859
Query: 148 KSKRSTLE 155
+ TLE
Sbjct: 860 EGNMVTLE 867
>sp|Q9FLT5|AB9A_ARATH ABC transporter A family member 9 OS=Arabidopsis thaliana GN=ABCA9
PE=3 SV=1
Length = 950
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 88 ITYTLPTQDTSPFPALFATLEEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDA 147
+T+ +P FA L++++S GI+ I + T+EEVFL ++A + ++ES
Sbjct: 798 MTFVIPHDKEQLLKGFFAELQDRESEFGIADIQLGLATLEEVFL---NIARRAELESATV 854
Query: 148 KSKRSTLE 155
+ TLE
Sbjct: 855 EGTMVTLE 862
>sp|Q84K47|AB2A_ARATH ABC transporter A family member 2 OS=Arabidopsis thaliana GN=ABCA2
PE=2 SV=1
Length = 983
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 88 ITYTLPTQDTSPFPALFATLEEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIESVDA 147
+T+ +P + + FA L++++ GIS I + T+EEVFL ++A K ++ES
Sbjct: 802 MTFVIPHDKENLLTSFFAELQDREEEFGISDIQLGLATLEEVFL---NIARKAELESAAV 858
Query: 148 KSKRSTLE 155
TL+
Sbjct: 859 DGTMVTLD 866
>sp|P34358|CED7_CAEEL ABC transporter ced-7 OS=Caenorhabditis elegans GN=ced-7 PE=1 SV=6
Length = 1704
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQ---ITYTLPTQDTSPFPALFA 105
G Y +T + Q + L+Q+ +P++ L T +++ + + +P + + A F
Sbjct: 1595 GNNYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFE 1654
Query: 106 TLEEKKSALGISSIGIACTTIEEVFLKVGDL 136
++ LG+ +A +++EE FL++ L
Sbjct: 1655 MVQALAKDLGVKDFILAQSSLEETFLRLAGL 1685
Score = 38.1 bits (87), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 31/144 (21%)
Query: 49 GAGYQLTFL---TSDDIQVSAI-TDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALF 104
G GY LT + D +++ I TD+ +V +A QI LP F LF
Sbjct: 769 GTGYLLTVVLDHNGDKRKMAVILTDVCTHYVKEAERGEMHGQQIEIILPEARKKEFVPLF 828
Query: 105 A--------------------TLEEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIES 144
TL+ + + L + S G++ T+E+VF+ +GD K++
Sbjct: 829 QALEAIQDRNYRSNVFDNMPNTLKSQLATLEMRSFGLSLNTLEQVFITIGD-----KVDK 883
Query: 145 VDAKSKRSTLEQVPNGESNKEPLL 168
A + S + N + EP L
Sbjct: 884 AIASRQNSRISH--NSRNASEPSL 905
>sp|Q8IZY2|ABCA7_HUMAN ATP-binding cassette sub-family A member 7 OS=Homo sapiens GN=ABCA7
PE=1 SV=3
Length = 2146
Score = 38.1 bits (87), Expect = 0.048, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 70 LIQSHVPDASLHNTQSSQITYTLP---TQDTSPFPALFATLEEKKSALGISSIGIACTTI 126
L+Q VP A L ++ LP D S F LF L+ + + L ++ GI+ T++
Sbjct: 1081 LVQHWVPGARLVEELPHELVLVLPYTGAHDGS-FATLFRELDTRLAELRLTGYGISDTSL 1139
Query: 127 EEVFLKV 133
EE+FLKV
Sbjct: 1140 EEIFLKV 1146
Score = 30.8 bits (68), Expect = 7.7, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 3 LWCILLIIV----PIHVTSNTRDSIRLLATYFPGYAMICG-FKLLGNFE----ANGAGYQ 53
LW LL +V + +TS++ + L + M+ G F+ LG+ + AG+
Sbjct: 1964 LWNSLLAVVREGRSVMLTSHSMEECEALCSRLA--IMVNGRFRCLGSPQHLKGRFAAGHT 2021
Query: 54 LTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATLEEKKSA 113
LT L + + + P A L ++ + LP +F L +
Sbjct: 2022 LT-LRVPAARSQPAAAFVAAEFPGAELREAHGGRLRFQLPPGGRCALARVFGELAVHGAE 2080
Query: 114 LGISSIGIACTTIEEVFL 131
G+ ++ T +EEVFL
Sbjct: 2081 HGVEDFSVSQTMLEEVFL 2098
>sp|Q9STT8|AB4A_ARATH ABC transporter A family member 4 OS=Arabidopsis thaliana GN=ABCA4
PE=3 SV=2
Length = 937
Score = 38.1 bits (87), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDAS-LHNTQSSQITYTLPTQDTSPFPALFATL 107
G Y LT TS + + + LIQ P+A +++ +Q + +P +D LF +
Sbjct: 844 GGSYVLTMTTSSEHE-KDVEMLIQDVSPNAKKIYHIAGTQ-KFEIP-KDEVRIAELFQAV 900
Query: 108 EEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIES 144
E+ K + + G+A TT+E+VF+KV A + S
Sbjct: 901 EKAKGNFRVFAWGLADTTLEDVFIKVARTAQASNVFS 937
>sp|Q8T6J0|ABCA7_DICDI ABC transporter A family member 7 OS=Dictyostelium discoideum
GN=abcA7 PE=3 SV=1
Length = 839
Score = 37.7 bits (86), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 49 GAGYQLTFLTSDDIQ-VSAITDLIQSHVPDASLHNTQSSQITYTLPTQDTSPFPALFATL 107
G GY + +D Q TDLI+S P A+L T + Y LP S L+ L
Sbjct: 748 GDGYSVRIDIQEDYQNTHNPTDLIKSFSPSATLSETFNGSYVYRLPKD--SIISDLYEYL 805
Query: 108 EEKKSALGISSIGIACTTIEEVFLKV 133
K + ++ T++E+VFLK+
Sbjct: 806 VLNKEQYHLQEWSLSQTSLEDVFLKI 831
>sp|Q8LPK0|AB8A_ARATH ABC transporter A family member 8 OS=Arabidopsis thaliana GN=ABCA8
PE=2 SV=3
Length = 901
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDAS-LHNTQSSQITYTLPTQDTSPFPALFATL 107
G Y LT TS++ + + L+ + +A ++ T +Q + LP Q+ +F L
Sbjct: 815 GGSYVLTVTTSEEHE-KEVEQLVHNISTNAKKIYRTAGTQ-KFELPKQEVK-IGEVFKAL 871
Query: 108 EEKKSALGISSIGIACTTIEEVFLKVG 134
E+ K+ + + G+A TT+E+VF+KV
Sbjct: 872 EKAKTMFPVVAWGLADTTLEDVFIKVA 898
>sp|Q9FLT8|AB12A_ARATH ABC transporter A family member 12 OS=Arabidopsis thaliana
GN=ABCA12 PE=3 SV=1
Length = 917
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 38 GFKLLGNFE----ANGAGYQLTFLTSDDIQVSAITDLIQSHVPDASLHNTQSSQITYTLP 93
G + +GN + G Y T TS + + L++S P+A + + LP
Sbjct: 809 GLQCIGNSKELKSRYGGSYVFTMTTSSKHE-EEVERLVESVSPNAKKIYHLAGTQKFELP 867
Query: 94 TQDTSPFPALFATLEEKKSALGISSIGIACTTIEEVFLKVGDLA 137
Q+ +F +E+ K+ + + G+A TT+E+VF+KV A
Sbjct: 868 KQEVR-IAEVFRAVEKAKANFTVFAWGLADTTLEDVFIKVARTA 910
>sp|Q6CWJ7|RPC3_KLULA DNA-directed RNA polymerase III subunit RPC3 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=RPC82 PE=3 SV=1
Length = 657
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 75 VPDASLHNTQSSQITYTLPTQDTSPFPALFATLEEKK--------SALGISSIGIACTTI 126
+PDA++ N +S ++ P+ TSP P ++LE++ S L S +G +T+
Sbjct: 9 IPDAAVPNGGASVVSAAEPSTSTSPEPIDISSLEQRTLNPDSFLYSELARSHLGERASTV 68
Query: 127 EEVFLKVGDLASKE 140
V + G L+++E
Sbjct: 69 LSVLVNKGRLSTRE 82
>sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7 OS=Arabidopsis thaliana GN=ABCA7
PE=1 SV=2
Length = 935
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDAS-LHNTQSSQITYTLPTQDTSPFPALFATL 107
G Y T TS + + + + LI+ P+A +++ +Q + LP ++ +F +
Sbjct: 842 GGSYVFTMTTSSEHEQN-VEKLIKDVSPNAKKIYHIAGTQ-KFELPKEEVR-ISEVFQAV 898
Query: 108 EEKKSALGISSIGIACTTIEEVFLKV 133
E+ KS + + G+A TT+E+VF+KV
Sbjct: 899 EKAKSNFTVFAWGLADTTLEDVFIKV 924
>sp|Q1PEH6|AB3A_ARATH ABC transporter A family member 3 OS=Arabidopsis thaliana GN=ABCA3
PE=2 SV=3
Length = 932
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDAS-LHNTQSSQITYTLPTQDTSPFPALFATL 107
G Y LT TS + + + L+Q P+ +++ +Q + +P +D +F +
Sbjct: 839 GGSYVLTMTTSSEHE-KDVEMLVQEVSPNVKKIYHIAGTQ-KFEIP-KDEVRISEVFQVV 895
Query: 108 EEKKSALGISSIGIACTTIEEVFLKVGDLA 137
E+ KS + + G+A TT+E+VF+KV A
Sbjct: 896 EKAKSNFKVFAWGLADTTLEDVFIKVARTA 925
>sp|Q54R52|ABCAA_DICDI ABC transporter A family member 10 OS=Dictyostelium discoideum
GN=abcA10 PE=3 SV=1
Length = 887
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 87 QITYTLPTQDTSPFPALFATLEEKKSALGISSIGIACTTIEEVFLKVGD 135
++ Y+L Q T LE ++ I I ++ TT++EVFLKV +
Sbjct: 827 ELEYSLTHQSTDVITEFLEELESRQDEFKIKRISMSMTTLDEVFLKVSE 875
>sp|Q8NCS7|CTL5_HUMAN Choline transporter-like protein 5 OS=Homo sapiens GN=SLC44A5 PE=2
SV=2
Length = 719
Score = 33.9 bits (76), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 175 VLFLVFLLFA-----TAMLLFTYSYSLIVQGPESLGYYFV--LNVVFG 215
VLFL LL A A L FT +I QGP SL YY+V L V+FG
Sbjct: 612 VLFLGKLLVAGSIGVLAFLFFTQRLPVIAQGPASLNYYWVPLLTVIFG 659
>sp|Q9STT7|AB5A_ARATH ABC transporter A family member 5 OS=Arabidopsis thaliana GN=ABCA5
PE=3 SV=2
Length = 936
Score = 33.9 bits (76), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 49 GAGYQLTFLTSDDIQVSAITDLIQSHVPDAS-LHNTQSSQITYTLPTQDTSPFPALFATL 107
G Y LT T + + + L+Q P+A +++ +Q + +P ++ +F +
Sbjct: 843 GGSYVLTMTTPSEHE-KDVEMLVQDVSPNAKKIYHIAGTQ-KFEIPKEEVR-ISEVFQAV 899
Query: 108 EEKKSALGISSIGIACTTIEEVFLKVGDLASKEKIES 144
E+ K + + G+A TT+E+VF+KV A + S
Sbjct: 900 EKAKDNFRVFAWGLADTTLEDVFIKVARTAQASNVFS 936
>sp|Q54IA8|HEMH_DICDI Ferrochelatase, mitochondrial OS=Dictyostelium discoideum GN=hemH
PE=3 SV=1
Length = 423
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 9 IIVPIHVTSNTRDSIRLLATYFPGYAMICGFKLLGNFEANGAGYQLTFLTSDDIQVSAIT 68
I++PI TS+ +++ + A CG KLL E+ L D + +SA+
Sbjct: 329 IVIPIAFTSDHIETLSEIDIELQHLAKKCGMKLLVRSES---------LNDDPLIISAMA 379
Query: 69 DLIQSHVP-DASLHNTQ 84
DL+ +H+ + ++H+ Q
Sbjct: 380 DLVNTHLKSNKTIHSNQ 396
>sp|Q5RJI2|CTL5_MOUSE Choline transporter-like protein 5 OS=Mus musculus GN=Slc44a5 PE=2
SV=1
Length = 710
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 186 AMLLFTYSYSLIVQGPESLGYYFV--LNVVFG 215
A LLFT +IV GP +L YY+V L +VFG
Sbjct: 622 AFLLFTERLQIIVDGPTTLNYYWVPFLTLVFG 653
>sp|P53918|ESBP6_YEAST Uncharacterized transporter ESBP6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ESBP6 PE=1 SV=1
Length = 673
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 119 IGIACTTIEEVFLKVGDLASKEKIESVDAKSKRSTLEQVPNGESNK---EPLLHQKVQGV 175
IGI+C+ V + + L + ++ KS R+ EQ+ S K +P + V
Sbjct: 378 IGISCSI--SVLVAIALLKERNPTPAIGLKSPRAMFEQLKAMFSLKVITKPFV---VLIA 432
Query: 176 LFLVFLLFATAMLLFTYSYSLIVQGPES 203
L+ +F LFA M++FT S I +G S
Sbjct: 433 LWFMFALFAYNMMVFTLSSYAISKGLSS 460
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,086,346
Number of Sequences: 539616
Number of extensions: 2813731
Number of successful extensions: 7606
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 7503
Number of HSP's gapped (non-prelim): 97
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)