Query psy8630
Match_columns 390
No_of_seqs 158 out of 906
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 23:42:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8630.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8630hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1300|consensus 100.0 1.1E-70 2.3E-75 545.4 37.3 380 1-381 43-506 (593)
2 KOG1299|consensus 100.0 1.6E-64 3.5E-69 486.2 32.5 367 1-382 41-494 (549)
3 PF00995 Sec1: Sec1 family; I 100.0 6.7E-61 1.5E-65 500.5 29.0 371 1-380 20-488 (564)
4 COG5158 SEC1 Proteins involved 100.0 1.6E-55 3.5E-60 445.1 32.4 369 1-377 44-506 (582)
5 KOG1301|consensus 100.0 1.3E-52 2.9E-57 408.5 28.1 371 1-385 60-552 (621)
6 KOG1302|consensus 100.0 1.2E-49 2.6E-54 396.7 31.1 359 1-373 54-521 (600)
7 PF05846 Chordopox_A15: Chordo 31.6 1.1E+02 0.0023 24.1 4.5 37 24-62 45-81 (90)
8 PHA02894 hypothetical protein; 23.5 1.2E+02 0.0026 23.6 3.5 45 15-61 52-96 (97)
9 PF06757 Ins_allergen_rp: Inse 20.7 4.1E+02 0.0089 23.3 7.1 119 197-323 45-171 (179)
10 cd01105 HTH_GlnR-like Helix-Tu 20.6 2.9E+02 0.0064 21.1 5.4 47 272-321 39-85 (88)
No 1
>KOG1300|consensus
Probab=100.00 E-value=1.1e-70 Score=545.43 Aligned_cols=380 Identities=55% Similarity=0.867 Sum_probs=333.3
Q ss_pred CchhhhcCccEEecccCCCCCCCCCceEEEecCCHHHHHHHHHHhcccccCCcceEEEeccchh--hHHhhh--------
Q psy8630 1 MHEISAEGMTIVEDIHKAREPLPSLEAVYLITPCEKSVKALMNDFNSSTRTMYKAAHVYFTECF--YYFSFL-------- 70 (390)
Q Consensus 1 mseL~e~gV~lve~i~~~R~~~~~~~aIyfi~Pt~~~i~~i~~d~~~~~~~~y~~y~i~F~~~~--~lle~l-------- 70 (390)
|+|++++||++||.|++.|+|+|.+.|||||+||.+||++++.||.. ..|+|+.+||||++.| ++++.+
T Consensus 43 m~~i~~egIt~ve~i~~~ReP~~SmeaIY~i~pt~~~V~~~i~Df~~-~~~~Y~~ahifF~~~c~~~lf~~l~ks~~a~~ 121 (593)
T KOG1300|consen 43 MSEILEEGITIVEDINKRREPLPSMEAIYFITPTEESVDCLIKDFEG-RSPLYKAAHIFFLDPCPDPLFNKLSKSRAAKK 121 (593)
T ss_pred HHHHHHcCceeeeeccccCCCCCcceeEEEecCchhhHHHHHHhhcc-cCcccceEEEEEcCCCCHHHHHHHHhhhHhhh
Confidence 78999999999999999999999999999999999999999999973 3689999999999999 776665
Q ss_pred -----------Cc--------------------chHHHhHHHHHHHHHHHHHHHHHhCCCCeEEecCCCch-HHHHHHHH
Q psy8630 71 -----------LV--------------------SILVLRMANMERIAEQIATLCATLGEYPSVRYRSDFDR-NVELAQLV 118 (390)
Q Consensus 71 -----------~p--------------------~~~~~~~~~~~~ia~~L~sl~~~lg~~P~Iry~~~~~~-a~~~a~~l 118 (390)
.| +.......+++++|++|+|||.+||++|.|||.+.... |..+|..+
T Consensus 122 i~tlkeinl~F~p~ESqvF~~~~~~~~~~~y~~~~a~~~~~~l~~~a~~I~tvCatL~e~P~vRy~~~~~~~as~l~~~v 201 (593)
T KOG1300|consen 122 IKTLKEINLAFIPYESQVFTLDSPDAFLQLYSPDNAAIIDANLEKIADQIATVCATLGEYPNVRYRGDFARNASELAQKV 201 (593)
T ss_pred hhhheecccccceecceeeeecChhhHHHhcCchhhhhhhhHHHHHHHHHHHHHHHhCcCcceeeccccccCHHHHHHHH
Confidence 11 11123467899999999999999999999999986432 33666666
Q ss_pred HHHHHH-HhccCCCCCCCCCCCCceEEEecCCCCcchhhhhhhchHHHHhhhccCCch----------------------
Q psy8630 119 QQKLDA-YKADEPTMGEGVEKARSQLLILDRGFDCVSPLLHELTLQAMAYDLLNIEND---------------------- 175 (390)
Q Consensus 119 ~~~l~~-~~~~~~~~~~~~~~~~~~LiIlDR~~D~vTPLlh~~TYqali~dl~~i~~~---------------------- 175 (390)
..++.+ ++.+.++++.+|..+++.|||+||++|+++||+|+||||||+||+++|+||
T Consensus 202 a~~l~~~~~~~~~~~~~~p~~~~seLlIlDRs~D~iaPlLHE~TyqAM~~DLl~iend~Y~ye~~g~~g~~kk~vllde~ 281 (593)
T KOG1300|consen 202 AAKLWDAYKAYKPSIGNGPQKTRSELLILDRSFDPVAPLLHEFTYQAMAYDLLPIENDVYRYETPGKSGEKKKEVLLDED 281 (593)
T ss_pred HHHHHHHHHhcccccCCCCCcccceEEEEeccccccchHHHHHHHHHHHHHHHhhcCCEEEEecCCCCCCccceeecccC
Confidence 666663 334445566667788999999999999999999999999999999999987
Q ss_pred -----------------hHHHHHHHHHHhcCC--CCCCccCHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8630 176 -----------------QVTKNLKKFIDSKRM--PQGDKQTMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKAYQGYV 236 (390)
Q Consensus 176 -----------------~v~~~~~~~~~~~~~--~~~~~~s~~e~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~~l 236 (390)
.|.+.+++|..+|+. .+++..|+.|+..+|+.||+|+++..+++.|++||++|++.++..+
T Consensus 282 D~~WveLRH~HIadvse~l~~~~k~f~~~nk~~~~~~k~~S~kDL~~mv~~lpqy~k~~~Kls~Hl~LA~eC~~~~~~~L 361 (593)
T KOG1300|consen 282 DDLWVELRHKHIADVSERLTKKMKNFSSKNKRLQTKSKETSTKDLSKMVKKLPQYQKELDKLSLHLELAEECMKKFQEGL 361 (593)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567888887743 2344579999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCchHHHHHHH
Q psy8630 237 DKLCRVEQDLATGEDAEGERIKDHMRNIVPILLDQNVSNYDKMRIIILYILNKNGISEDNLNKLITHAQIQPPEKQAIVN 316 (390)
Q Consensus 237 ~~~~~~Eq~i~~g~~~~g~~~~~~~~~i~~~l~~~~~~~~dkLRLl~L~~l~~~g~~~~~~~~ll~~~g~~~~~~~~l~~ 316 (390)
.+++++||++++|.|..|+.+++.+..+.+++.+..++..||+|++++|.+..+|+.+.++.+|+++.|++.++.+++.|
T Consensus 362 ~~l~~iEQDLa~G~Daeg~kik~~~~~~~p~l~~~~~~~~dklR~Illy~~~~~Gi~ee~l~kL~~~~~i~~~~~~ii~~ 441 (593)
T KOG1300|consen 362 EKLGAIEQDLATGTDAEGEKIKDSLRDLLPILLESNVRLLDKLRLILLYIFERKGIIEENLAKLLQHAGISVEEMQIIQN 441 (593)
T ss_pred HHHHHHHHHHhccCCcccccHHHHHHhhhhhhcccCchHHHHHHHHHHHHHhcCCccHHHHHHHhcccCCCchHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred HHHcCCcccccCCCCCCCCCCCcCCCCccccccccccchHHHHHHHHHhCCCCCCCCCCccCCCC
Q psy8630 317 LANLGLNSVIDGNRKKLYQIPRKERISECTYQMSRWTPIVKDIMEDAIEDKLDQKHFPFLAGHVT 381 (390)
Q Consensus 317 l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~y~P~l~~ii~~~~~~~L~~~~yP~v~~~~~ 381 (390)
+..+|.....++...+.....|++++.+..|.+|||+|.+++|+|++++|+||.++|||+++++.
T Consensus 442 ~~~~~~~~~~~~~~~k~~~~~rker~~e~tyqlSR~~P~Ik~ilE~~i~~~Ld~~~fp~~~~~s~ 506 (593)
T KOG1300|consen 442 LHILGVPVTKDSFLLKFDPPERKERVEEQTYQLSRWVPVIKNILEKLIEDRLDKKHFPYLNDTSE 506 (593)
T ss_pred HHHhCCccccCcccccCCCCccccccccceeeeeeeehHHHHHHHHHHhccCChhhCccccCCcc
Confidence 99999988776544444444577778899999999999999999999999999999999999983
No 2
>KOG1299|consensus
Probab=100.00 E-value=1.6e-64 Score=486.21 Aligned_cols=367 Identities=24% Similarity=0.394 Sum_probs=296.3
Q ss_pred CchhhhcCccEEecccC-CCCCCCCCceEEEecCCHHHHHHHHHHhcccccCCcceEEEeccchh--hHHhhh-------
Q psy8630 1 MHEISAEGMTIVEDIHK-AREPLPSLEAVYLITPCEKSVKALMNDFNSSTRTMYKAAHVYFTECF--YYFSFL------- 70 (390)
Q Consensus 1 mseL~e~gV~lve~i~~-~R~~~~~~~aIyfi~Pt~~~i~~i~~d~~~~~~~~y~~y~i~F~~~~--~lle~l------- 70 (390)
.|||++++|+++|+|++ +|+.+.|.+||+|||||.+||++++++++ +|+|..|||||+|.+ ..++.|
T Consensus 41 QSelLq~evyLferI~n~~rE~~khLkcvvfiRPT~eniq~L~~ELr---nPry~~Y~lyFsN~i~ks~le~LAesD~~E 117 (549)
T KOG1299|consen 41 QSELLQKEVYLFERIDNKSRERIKHLKCVVFIRPTPENIQLLIEELR---NPRYGEYHLYFSNIISKSDLERLAESDEQE 117 (549)
T ss_pred hHHHhhhheehhhhhcchhhHHhhCceEEEEeccChHHHHHHHHHhc---CCcceeEEEEEeccCCHHHHHHHHhcchHH
Confidence 38999999999999975 89999999999999999999999999999 589999999999987 333333
Q ss_pred ---------------C--------cchH----HHhHHHHHHHHHHHHHHHHHhCCCCeEEecCCCchHHHHHHHHHHHHH
Q psy8630 71 ---------------L--------VSIL----VLRMANMERIAEQIATLCATLGEYPSVRYRSDFDRNVELAQLVQQKLD 123 (390)
Q Consensus 71 ---------------~--------p~~~----~~~~~~~~~ia~~L~sl~~~lg~~P~Iry~~~~~~a~~~a~~l~~~l~ 123 (390)
+ |++. .+++..++|+.+||++|+++||..|.|||+++|..|+++|+.+...|.
T Consensus 118 ~V~eVqE~y~Df~~~n~~Lfsln~p~~~~~~~~w~~~~l~R~~~GI~AllLsLK~~P~IRYq~~S~~~~~lAe~vs~~i~ 197 (549)
T KOG1299|consen 118 VVREVQEIYLDFFKVNPDLFSLNIPHIFESSLNWDPGALTRSTQGIIALLLSLKKKPVIRYQTSSRACKRLAEEVSYRIT 197 (549)
T ss_pred HHHHHHHHHHhhhccCCceeecCCchhhccccccChhhhhHhHhhHHHHHHhccCCCeeEeecCCHHHHHHHHHHHHHHh
Confidence 2 3332 467889999999999999999999999999999999999999999887
Q ss_pred HHhccCCCCCCCCCCCCceEEEecCCCCcchhhhhhhchHHHHhhhccCCch----------------------------
Q psy8630 124 AYKADEPTMGEGVEKARSQLLILDRGFDCVSPLLHELTLQAMAYDLLNIEND---------------------------- 175 (390)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~LiIlDR~~D~vTPLlh~~TYqali~dl~~i~~~---------------------------- 175 (390)
. .+.-.+|. .....|+||||||+.||+||||+|||||||+||++||+||
T Consensus 198 ~-E~~lFdfr--~~~~~p~LLiLDR~~DpvTPLL~qWTYQaMvHEl~gi~nnrvdls~~~~~~kd~~evvLS~~~D~Ff~ 274 (549)
T KOG1299|consen 198 K-ESTLFDFR--RTDSPPLLLILDRRDDPVTPLLNQWTYQAMVHELLGIKNNRVDLSKVPSIPKDLEEVVLSSEQDPFFK 274 (549)
T ss_pred h-hhhhcccc--cCCCCCeEEEEecCCCCCchhhhHHHHHHHHHHHhccccCEEeeccCCCCccccceeeeccccchHHH
Confidence 6 21111222 1234689999999999999999999999999999999998
Q ss_pred --------hHHHHHHHHHHh---cCCCCCCccCHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q psy8630 176 --------QVTKNLKKFIDS---KRMPQGDKQTMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKAYQG-YVDKLCRVE 243 (390)
Q Consensus 176 --------~v~~~~~~~~~~---~~~~~~~~~s~~e~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~-~l~~~~~~E 243 (390)
+|+..+|.+.++ +++...+..|+.||+.||.++|+|+++++.+++|+.+++++++.+++ +|.+++|+|
T Consensus 275 ~nmy~NfgEiG~~IK~lv~~fq~k~~~~~~iesi~Dmk~Fve~YPefkkmSG~VsKHv~lvgEls~lv~~~nL~evSEvE 354 (549)
T KOG1299|consen 275 NNMYANFGEIGSNIKQLVSEFQFKTKTNSNIESIADMKNFVEDYPEFKKMSGNVSKHVALVGELSKLVQRRNLLEVSEVE 354 (549)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhHHHHHHHHHhcHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 344455555443 22334467899999999999999999999999999999999999996 899999999
Q ss_pred HHHhcCCCcchhhhHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhCCCCHHHHHHHHHHc---CCCchHHHHHHHHHH-
Q psy8630 244 QDLATGEDAEGERIKDHMRNIVPILLDQNVSNYDKMRIIILYILNKNGISEDNLNKLITHA---QIQPPEKQAIVNLAN- 319 (390)
Q Consensus 244 q~i~~g~~~~g~~~~~~~~~i~~~l~~~~~~~~dkLRLl~L~~l~~~g~~~~~~~~ll~~~---g~~~~~~~~l~~l~~- 319 (390)
|+++|+.+. |. .++.|..+|.+.+++..|++||+|||+|++...+..++.++.+.. |- ..-.++..|.+
T Consensus 355 Q~l~c~~~~-~~----~~~~i~~LL~n~~vs~~d~lrLv~lYaLr~e~~~~~~~~~L~~~l~~~~~--~~~~~v~~ll~~ 427 (549)
T KOG1299|consen 355 QNLACNGDH-GA----DFNDIKKLLQNEKVSEIDRLRLVALYALRYERHPPNELRQLPQILREQGP--KKPELVPFLLKY 427 (549)
T ss_pred HHHHhcCcc-hh----hHHHHHHHHcCCcccHHHHHHHHHHHHHHhccCChHHHHHHHHHHHhcCC--CcchhHHHHHHh
Confidence 999997654 32 457888899999999999999999999999877777776665443 32 23345555544
Q ss_pred cCCcccccC--CCCC----CCCCCCcCCCCccccccccccchHHHHHHHHHhCCCCCCCCCCccCCCCC
Q psy8630 320 LGLNSVIDG--NRKK----LYQIPRKERISECTYQMSRWTPIVKDIMEDAIEDKLDQKHFPFLAGHVTS 382 (390)
Q Consensus 320 lg~~~~~~~--~~~~----~~~~~~~~~~~~~~y~~s~y~P~l~~ii~~~~~~~L~~~~yP~v~~~~~~ 382 (390)
.|...+++. +... +.+..++.++++++|+ +|.|+++++++++++|+|++..||+++..++.
T Consensus 428 ~G~~~R~~dlf~~~~~v~i~R~~~kglkgvENVyt--QH~P~lk~~l~~~~rgRl~~~~~p~l~~~~s~ 494 (549)
T KOG1299|consen 428 AGLHVRQGDLFGPNDLVPIARRFIKGLKGVENVYT--QHQPLLKSTLEDLFRGRLKEIDYPFLGSQTSR 494 (549)
T ss_pred cCcccccccccCcchhHHHHHHHhhccCcchhhhh--ccCHHHHHHHHHHHhcccccCCCccccccccc
Confidence 455554431 1111 1112345567889998 99999999999999999999999999975544
No 3
>PF00995 Sec1: Sec1 family; InterPro: IPR001619 Sec1-like molecules have been implicated in a variety of eukaryotic vesicle transport processes including neurotransmitter release by exocytosis []. They regulate vesicle transport by binding to a t-SNARE from the syntaxin family. This process is thought to prevent SNARE complex formation, a protein complex required for membrane fusion. Whereas Sec1 molecules are essential for neurotransmitter release and other secretory events, their interaction with syntaxin molecules seems to represent a negative regulatory step in secretion []. ; GO: 0006904 vesicle docking involved in exocytosis, 0016192 vesicle-mediated transport; PDB: 3C98_A 3PUJ_B 1FVH_A 1FVF_A 1EPU_A 2XHE_A 1MQS_A 2PJX_A 3PUK_A 1Y9J_A.
Probab=100.00 E-value=6.7e-61 Score=500.47 Aligned_cols=371 Identities=30% Similarity=0.574 Sum_probs=281.9
Q ss_pred CchhhhcCccEEecccCCCCCCCCCceEEEecCCHHHHHHHHHHhcccccCCcceEEEeccchh--hHHhhh--------
Q psy8630 1 MHEISAEGMTIVEDIHKAREPLPSLEAVYLITPCEKSVKALMNDFNSSTRTMYKAAHVYFTECF--YYFSFL-------- 70 (390)
Q Consensus 1 mseL~e~gV~lve~i~~~R~~~~~~~aIyfi~Pt~~~i~~i~~d~~~~~~~~y~~y~i~F~~~~--~lle~l-------- 70 (390)
|++|+++||++++.|++.|+|+++.+|||||+|+.+|+++|++|++. +.|++|||+|+|.+ ..++.+
T Consensus 20 ~~~L~~~gV~~i~~l~~~r~~~~~~~~iy~i~p~~~~i~~i~~~~~~---~~~~~~~i~f~~~~~~~~~~~l~~~~~~~~ 96 (564)
T PF00995_consen 20 MSDLLEHGVTLIEKLENKREPMPSMDAIYFIRPTPENIKRIIKDLKN---PPYRSYHIFFTPRVSESLLEILAESGVLGR 96 (564)
T ss_dssp HHHHHTTTEEEEEETTS--S-BTTSEEEEEE-S-HHHHHHHHHHCHS---TSBSEEEEEESS---HHHHHHHHHSCGGGG
T ss_pred HHHHHHcCCceEeeccchhhcCCCcceEEEEcCcHHHHHHHHHHHHh---cccccEEEEEehhhhhHHHHhhhhcCccce
Confidence 57999999999999999999999999999999999999999999994 79999999999998 333333
Q ss_pred ----------------------Ccch-----H-HHhHHHHHHHHHHHHHHHHHhCCCCeEEecCCCchHHHHHHHHHHHH
Q psy8630 71 ----------------------LVSI-----L-VLRMANMERIAEQIATLCATLGEYPSVRYRSDFDRNVELAQLVQQKL 122 (390)
Q Consensus 71 ----------------------~p~~-----~-~~~~~~~~~ia~~L~sl~~~lg~~P~Iry~~~~~~a~~~a~~l~~~l 122 (390)
.|.+ . ..+.+.++++|++|+++|.++|.+|.|||+++ ..|+.+|+.+.+++
T Consensus 97 i~~i~e~~~~~~pld~d~fsl~~~~~~~~~~~~~~~~~~l~~~a~~L~~l~~~~g~~p~I~~~g~-~~a~~v~~~l~~~~ 175 (564)
T PF00995_consen 97 IKSIKEFNLDFIPLDSDLFSLEIPNSFSDLYSSDGDESSLQRIADSLLSLQLTLGEIPNIRYKGN-SNAKRVAELLQKKL 175 (564)
T ss_dssp EEEEEETT--SEEECTTEEEES-TCHHHHHHSTTGHHHHHHHHHHHHHHHHHHTT---EEEE-TT-CHHHHHHHHHHHHH
T ss_pred ecccccceeEEEEccchhhhhcccchHHHHhccccchhHHHHHHHHHHHHHHHhCCCCeEEEeCc-hhHHHHHHHHHHHh
Confidence 1211 1 45788999999999999999999999999997 46999999999888
Q ss_pred HHHh----ccCCCCCCCCCCCCceEEEecCCCCcchhhhhhhchHHHHhhhccCCch-----------------------
Q psy8630 123 DAYK----ADEPTMGEGVEKARSQLLILDRGFDCVSPLLHELTLQAMAYDLLNIEND----------------------- 175 (390)
Q Consensus 123 ~~~~----~~~~~~~~~~~~~~~~LiIlDR~~D~vTPLlh~~TYqali~dl~~i~~~----------------------- 175 (390)
++.. ...+..++++..++++|||+||++|++||||||||||||+||+|||++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~LiIlDR~~D~iTPll~~~TYe~li~d~~~i~~~~v~~~~~~~~~~~~~~~~L~~~D 255 (564)
T PF00995_consen 176 QENEDNFSSSNPDFPPGSSFERPLLIILDRSVDLITPLLHQWTYEGLIDDLFGINNNKVEIPDEINSGENKKKVVLNSND 255 (564)
T ss_dssp HHHHTTHCHCSTTTT-SCSCCSEEEEEEEGGG-SSTTTS---BHHHHHHHHSTEBTTEEEEEECSSSSECEEEEE-STTC
T ss_pred hhccccccccccccCCccccCCceEEEecccccccchhhcCceeeeEHHhhhhhcCCEeccccCCCccccceeEecCCCC
Confidence 7732 2223333233456789999999999999999999999999999999987
Q ss_pred ----------------hHHHHHHHHHHhcCCCCCCccCHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q psy8630 176 ----------------QVTKNLKKFIDSKRMPQGDKQTMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKAYQG-YVDK 238 (390)
Q Consensus 176 ----------------~v~~~~~~~~~~~~~~~~~~~s~~e~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~-~l~~ 238 (390)
.|.+.++++..++....++..++++|++||+++|+++++++.++.|++|+++|++.+++ .|.+
T Consensus 256 ~~~~~~r~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~ 335 (564)
T PF00995_consen 256 PFFNEIRHLHFSEVGEKLNKKAKELKEEYEKSRSKSKSIQEMKEFVKKLPELQEQQKSLSLHTNIAEEILKIIKKRNLDE 335 (564)
T ss_dssp TCHHHHTTSBCHHHHHHHHHHHHHHHHHCH----STTTHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23344555554431134457799999999999999999999999999999999999997 7999
Q ss_pred HHHHHHHHhcCCCcchhhhHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhCCCCH---HHHHHHHHHcCCCchHHHHHH
Q psy8630 239 LCRVEQDLATGEDAEGERIKDHMRNIVPILLDQNVSNYDKMRIIILYILNKNGISE---DNLNKLITHAQIQPPEKQAIV 315 (390)
Q Consensus 239 ~~~~Eq~i~~g~~~~g~~~~~~~~~i~~~l~~~~~~~~dkLRLl~L~~l~~~g~~~---~~~~~ll~~~g~~~~~~~~l~ 315 (390)
++++||+|++|.+.+|. ..+.|+++|.+.+.+..++|||+|||+++. |++. +++++++...|++.+++.++.
T Consensus 336 ~~~~Eq~i~~~~~~~~~----~~~~i~~~i~~~~~~~~d~LRLl~L~sl~~-g~~~~~~~~l~~~l~~~~~g~~~l~~l~ 410 (564)
T PF00995_consen 336 LIELEQDIASGEDSDGE----LLQYIEELINSRKISIEDKLRLLCLYSLTN-GIKGKDYDQLKKLLLQAGYGIEALQLLN 410 (564)
T ss_dssp HHHHHHHHHHSCHTTSH----B-SCHHHHHHSTTSTHHHHHHHHHHHHHHH--HTCBHHHHHHHHHHHTT--HCHHHHHH
T ss_pred HHHhhHHHHhCCccchh----hHHHHHHHhhccCCCHHHHHHHHHHHHHHh-cCCcchHHHHHHHhhhcCCChHHHHHHH
Confidence 99999999999887653 234577777567899999999999999997 6554 446666666677779999999
Q ss_pred HHHHcCCcccccC-----CCCCCCCC-------CCcCCCCccccccccccchHHHHHHHHHhCCCC-CCCCCCccCCC
Q psy8630 316 NLANLGLNSVIDG-----NRKKLYQI-------PRKERISECTYQMSRWTPIVKDIMEDAIEDKLD-QKHFPFLAGHV 380 (390)
Q Consensus 316 ~l~~lg~~~~~~~-----~~~~~~~~-------~~~~~~~~~~y~~s~y~P~l~~ii~~~~~~~L~-~~~yP~v~~~~ 380 (390)
+|+++|+...+.+ ..++.++. ..+..+.+..|+++||+|+++++|+.+.+|+|+ +..||++.+.+
T Consensus 411 ~L~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~y~Pli~rlve~~~~~~l~~~~~~~~~~~~~ 488 (564)
T PF00995_consen 411 NLEKLGLLKSKDNSSNFQSIRKKLNLISKFNDKNDKNNPKDISYVYSGYAPLIVRLVEDLIKGKLDKEEEFPYLDPKP 488 (564)
T ss_dssp HGGGGTHHCBSHTTS--CTTC-TT---HHTTCCCSSSSCSCCCSTTCT---HHHHHHHHHHTTHSHHTTTSEBSSTCC
T ss_pred HHHHhcchhhccCccchhhhcccccccccccccccccccccccchhcccccHHHHHHHHHhhccCCcccccccccccc
Confidence 9999998876621 11122221 122345789999999999999999999999998 99999999887
No 4
>COG5158 SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion]
Probab=100.00 E-value=1.6e-55 Score=445.14 Aligned_cols=369 Identities=26% Similarity=0.458 Sum_probs=285.9
Q ss_pred CchhhhcCccEEecccCCCCCCCCCceEEEecCCHHHHHHHHHHhcccccCCcceEEEeccchh--hHHhhh--------
Q psy8630 1 MHEISAEGMTIVEDIHKAREPLPSLEAVYLITPCEKSVKALMNDFNSSTRTMYKAAHVYFTECF--YYFSFL-------- 70 (390)
Q Consensus 1 mseL~e~gV~lve~i~~~R~~~~~~~aIyfi~Pt~~~i~~i~~d~~~~~~~~y~~y~i~F~~~~--~lle~l-------- 70 (390)
+++|++|||++++.|+.+|+|.++++|||||+||.+|+++|++|++.. .|.|..||+.|+|.+ .++|.+
T Consensus 44 ~s~lle~~I~~~~~i~~~R~~~~~~~aiy~v~pt~e~i~~i~~D~~~~-~~~Y~~~~~~f~~~~~~~l~e~l~es~~~~~ 122 (582)
T COG5158 44 TSELLEHGITLVDLIENKREPISDLPAIYFVRPTKENIDLILEDLEQW-DPFYLNYHISFLNTVTESLLELLAESGVFEK 122 (582)
T ss_pred hHHHHhcCceEEEeecCCCCCCCCCCEEEEEcCchHHHHHHHHHHhcc-CccccceeEEecccchHHHHHHHhhcCchhh
Confidence 589999999999999999999999999999999999999999999953 489999999999988 444433
Q ss_pred ----------------------CcchH-----HHhHHHHHHHHHHHHHHHHHhCCCCeEEecCCCchHHHHHHHHHHHHH
Q psy8630 71 ----------------------LVSIL-----VLRMANMERIAEQIATLCATLGEYPSVRYRSDFDRNVELAQLVQQKLD 123 (390)
Q Consensus 71 ----------------------~p~~~-----~~~~~~~~~ia~~L~sl~~~lg~~P~Iry~~~~~~a~~~a~~l~~~l~ 123 (390)
.|... .+....+.+|++||+|+|.++|.+|.|||.++ +.|..+|+++...++
T Consensus 123 i~~V~e~~ldf~~le~dlfsl~~p~~~~~~~~~~~~~~~~~~v~gl~S~~~slg~~P~Ir~~~~-~~a~~~ak~l~~~~~ 201 (582)
T COG5158 123 ILSVYEIYLDFFVLESDLFSLNLPESFLESSLPSTTEALIKIVNGLFSLCVSLGRIPIIRYSGG-KNAEHMAKKLSDEIR 201 (582)
T ss_pred eeeeeeeecceEEechHhHhhcCchhhhhhcCCCchHHHHHHHhhHHHHHhhcCCcceEEecCC-chHHHHHHHHHHHHH
Confidence 11110 01112444899999999999999999999998 579999999999888
Q ss_pred HHhccCCCCCCCCCCCCceEEEecCCCCcchhhhhhhchHHHHhhhccCCch----------------------------
Q psy8630 124 AYKADEPTMGEGVEKARSQLLILDRGFDCVSPLLHELTLQAMAYDLLNIEND---------------------------- 175 (390)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~LiIlDR~~D~vTPLlh~~TYqali~dl~~i~~~---------------------------- 175 (390)
+....+.+........+++|||+||+.|++|||+|+||||||+||++++++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~LIIlDRs~D~iTPlLh~wTYqaml~Dl~~~~~~~v~~~~~~~~g~~kk~~~~~~~D~~w~~ 281 (582)
T COG5158 202 NELSINFDGVVSKNPLRPILIILDRSLDPITPLLHQWTYQAMLHDLLGINNNIVTIPSSSVNGPEKKFSLSDKDDPFWND 281 (582)
T ss_pred HHHHhhcccccccCCCCceEEEEecCCCcccchHHHHHHHHHHHHHHHhhcCeEEecccccccccceeccCCcccHhHHH
Confidence 5433222221111226899999999999999999999999999999999998
Q ss_pred -------hHHHHH----HHHHHhcCCC-CCCccCHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q psy8630 176 -------QVTKNL----KKFIDSKRMP-QGDKQTMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKAYQG-YVDKLCRV 242 (390)
Q Consensus 176 -------~v~~~~----~~~~~~~~~~-~~~~~s~~e~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~-~l~~~~~~ 242 (390)
+|.+.+ ++|..+++.. +.+..|+.||++||.+||++++.++++.+|++|+++|++++++ +|++++++
T Consensus 282 ~k~~~f~~v~e~l~~~~~~l~~~~~~~~~~~~~s~~dik~~v~~lpel~~~~~~l~~H~~l~~e~l~~~~~~~l~~f~eI 361 (582)
T COG5158 282 NKFLNFGEVGEKLKKLAKELKTKAQLRHKENAKSVNDIKEFVDKLPELQKRSRSLNKHLTLASELLKVVEERYLDDFSEI 361 (582)
T ss_pred hccCchhhHHHHHHHHHHHHHHHHhhhhhhhcccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223333 3344333322 2345799999999999999999999999999999999999996 89999999
Q ss_pred HHHHhcCCCcchhhhHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhCCC-CHHHHHHHHHHcCCCchHHHHHHHHHHcC
Q psy8630 243 EQDLATGEDAEGERIKDHMRNIVPILLDQNVSNYDKMRIIILYILNKNGI-SEDNLNKLITHAQIQPPEKQAIVNLANLG 321 (390)
Q Consensus 243 Eq~i~~g~~~~g~~~~~~~~~i~~~l~~~~~~~~dkLRLl~L~~l~~~g~-~~~~~~~ll~~~g~~~~~~~~l~~l~~lg 321 (390)
||++.++.+. +..+..+...+.. +....+||||+|||+|+.+|+ .+.+..+++...|++.+++..+.+|..+|
T Consensus 362 Eq~l~~~~~~-----~~~i~Dli~~l~~-~~~E~~klRllilysL~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~l~~~~ 435 (582)
T COG5158 362 EQNLSTGNDV-----KSDISDLIELLES-GVEEDDKLRLLILYSLTKDGLIKDIDELRLLRIQGYGIEALNFFQRLKELG 435 (582)
T ss_pred HHhhhcCCcc-----hhhHHHHHHHHhc-CchHHHHHHHHHHHHHhcCcchhHHHHHHHHHhcCCCHHHHHHHHHHHHHh
Confidence 9999998764 3345566666543 333336999999999999884 33356667777788889999999999998
Q ss_pred CcccccCC-------CC-------CCCCCCCc-CCCCccccccccccchHHHHHHHHHhCCCCCCCCCCcc
Q psy8630 322 LNSVIDGN-------RK-------KLYQIPRK-ERISECTYQMSRWTPIVKDIMEDAIEDKLDQKHFPFLA 377 (390)
Q Consensus 322 ~~~~~~~~-------~~-------~~~~~~~~-~~~~~~~y~~s~y~P~l~~ii~~~~~~~L~~~~yP~v~ 377 (390)
....++.. .+ ..+...+. ....+..++|++|.|..+++...++.+++.+..++.+.
T Consensus 436 ~~~~~~~~~~s~~~g~~d~l~~~~n~y~~s~~~~~~~~~~~v~~~~iP~~k~~~~~~~~~~~~~~~~s~~~ 506 (582)
T COG5158 436 FLTLKDSKTISLKRGDKDSLFQWFNTYSLSREHQGVPDLENVYSGLIPLKKDIPIDLLVRRLFEPLKSSQQ 506 (582)
T ss_pred hhhhhcccccccccCCcccccCcccccccccccCCCchHHHHHHhhcchhcccchhhhhhhhcccccchhc
Confidence 77433211 00 00111111 12356778889999999999999999999988888777
No 5
>KOG1301|consensus
Probab=100.00 E-value=1.3e-52 Score=408.49 Aligned_cols=371 Identities=22% Similarity=0.376 Sum_probs=279.4
Q ss_pred CchhhhcCccEEecccCCCCCCCCCceEEEecCCHHHHHHHHHHhcccccCCcceEEEeccchh--hHHhhh--------
Q psy8630 1 MHEISAEGMTIVEDIHKAREPLPSLEAVYLITPCEKSVKALMNDFNSSTRTMYKAAHVYFTECF--YYFSFL-------- 70 (390)
Q Consensus 1 mseL~e~gV~lve~i~~~R~~~~~~~aIyfi~Pt~~~i~~i~~d~~~~~~~~y~~y~i~F~~~~--~lle~l-------- 70 (390)
++||++||||++..|...|+|+|+++|||||+||.|||++|++|++ +.+|.+||++|++.+ ..||+|
T Consensus 60 VkeLRe~GvTlH~li~~dR~Pi~DVPAVYFV~Pt~eNid~i~~Dl~---~~lY~~~ylNF~Ssi~R~~LE~lA~~a~~~g 136 (621)
T KOG1301|consen 60 VKELREHGITLHLLITSDRDPIPDVPAVYFVSPTEENIDRIIQDLS---KGLYDSYYLNFISSISRSLLEDLASAASETG 136 (621)
T ss_pred HHHHHhcCcEEEEeeccccCCCCCCCeEEEeCCchHhHHHHHHHHH---HhhhhhheeeccccccHHHHHHHHHHHhhcc
Confidence 3799999999999999999999999999999999999999999999 479999999999998 777776
Q ss_pred -----------------------------------CcchH-HHhHHHHHHHHHHHHHHHHHhCCCCeEEecCCCchHHHH
Q psy8630 71 -----------------------------------LVSIL-VLRMANMERIAEQIATLCATLGEYPSVRYRSDFDRNVEL 114 (390)
Q Consensus 71 -----------------------------------~p~~~-~~~~~~~~~ia~~L~sl~~~lg~~P~Iry~~~~~~a~~~ 114 (390)
.|... ...+..+++||+|||++|.+||.+|.||+.+|+ .|+.+
T Consensus 137 ~v~~I~kVyDQYlnFI~LEddlFsL~~~~~~~~~n~p~t~e~ei~~~~~~IvdgLF~v~vTlG~VPiIRcp~g~-aAEmv 215 (621)
T KOG1301|consen 137 AVLQIHKVYDQYLNFIVLEDDLFSLGMQNSFHAINRPSTTEEEINALMDRIVDGLFSVFVTLGEVPIIRCPKGG-AAEMV 215 (621)
T ss_pred hHHHHHHHHHhHhhheeecchhhhhcccccchhccCCCchHHHHHHHHHHHHHHHHHHheecccceeEECCCCC-HHHHH
Confidence 12111 345788999999999999999999999999986 59999
Q ss_pred HHHHHHHHHHHhcc--CCCC---CCCCCCCCceEEEecCCCCcchhhhhhhchHHHHhhhccCCch--------------
Q psy8630 115 AQLVQQKLDAYKAD--EPTM---GEGVEKARSQLLILDRGFDCVSPLLHELTLQAMAYDLLNIEND-------------- 175 (390)
Q Consensus 115 a~~l~~~l~~~~~~--~~~~---~~~~~~~~~~LiIlDR~~D~vTPLlh~~TYqali~dl~~i~~~-------------- 175 (390)
|++|.++|++...+ +..| +.+...++|+|+|+||++|++||+.|.||||||+||+|+++.|
T Consensus 216 A~kL~qKLRd~l~d~k~~lft~~~~~~~~~RPvLvl~DRn~Dlat~l~HtWtYqaLvhDvl~l~lN~vtv~~~~~~~~~k 295 (621)
T KOG1301|consen 216 ARKLDQKLRDNLRDTKNNLFTMDGGGAGFQRPVLVLLDRNIDLATPLHHTWTYQALVHDVLDLELNRVTLESESKRKKKK 295 (621)
T ss_pred HHHHHHHHHHHhHhhcccceeccCcccCCCCceEEEEecccccccccccceehHHHHHHHHhcccceEEeeccccCCCCc
Confidence 99999999975432 1122 1123468999999999999999999999999999999999987
Q ss_pred ------------------------hHHHHHHHHHHhc----CCC--CC-------CccCHHHHHHHHHhChhHHHHHHHH
Q psy8630 176 ------------------------QVTKNLKKFIDSK----RMP--QG-------DKQTMRDLSQMIKKMPQYQKELSKY 218 (390)
Q Consensus 176 ------------------------~v~~~~~~~~~~~----~~~--~~-------~~~s~~e~~~~v~~lp~~~~~~~~l 218 (390)
.|.+++..|.++. +.. .| ...+...+.++|++||++.+.++.+
T Consensus 296 ~yDld~~D~fW~~n~~~pFP~VAE~Ve~eL~~Yk~~~~ei~r~~G~sg~~e~~~~~~~Dtt~l~~aV~sLPEL~ekK~~I 375 (621)
T KOG1301|consen 296 SYDLDPNDKFWRRNKGSPFPEVAENVEEELESYKNEEAEIKRKMGLSGEDEGAIDELNDTTKLQSAVSSLPELTEKKRLI 375 (621)
T ss_pred cccCCCccHHHHhcCCCCCchHHHHHHHHHHHHHhhHHHHHhhcCCCcccccccccccchHHHHHHHHHhHHHHHhhhhH
Confidence 4556666776541 110 11 1234458999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCcchhhhHHHHHHHHHHhhc-CCCCchhHHHHHHHHHHHhCCCCHHH
Q psy8630 219 STHLHLAEDCMKAYQG-YVDKLCRVEQDLATGEDAEGERIKDHMRNIVPILLD-QNVSNYDKMRIIILYILNKNGISEDN 296 (390)
Q Consensus 219 ~~H~~i~~~i~~~~~~-~l~~~~~~Eq~i~~g~~~~g~~~~~~~~~i~~~l~~-~~~~~~dkLRLl~L~~l~~~g~~~~~ 296 (390)
.+|+|||+++.+.++. +|++++++|++++++. -+ ..+.+++.+ ...+.+||||++++|.++....++.+
T Consensus 376 D~HtnIatalL~~IkeR~lD~ff~~E~~~~~~~-l~--------~~~l~~~~~~~~gt~EDkLR~~Ii~~ls~et~~~s~ 446 (621)
T KOG1301|consen 376 DLHTNIATALLEQIKERKLDDFFEVEKKIMSTT-LD--------RSLLDILEDGEAGTPEDKLRLFIIYYLSTETVPQSD 446 (621)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHhccccccc-cc--------HHHHHHHhcccCCChHHHHHHHHHHHHhhccccHHH
Confidence 9999999999999996 9999999999999732 21 233344444 45788999999999999987666665
Q ss_pred H---HHHHHHcCCCchHHHHHHHHHHcCCccc---c-cCCCCCCCCCCCc---------CCCCccccccccccchHHHHH
Q psy8630 297 L---NKLITHAQIQPPEKQAIVNLANLGLNSV---I-DGNRKKLYQIPRK---------ERISECTYQMSRWTPIVKDIM 360 (390)
Q Consensus 297 ~---~~ll~~~g~~~~~~~~l~~l~~lg~~~~---~-~~~~~~~~~~~~~---------~~~~~~~y~~s~y~P~l~~ii 360 (390)
+ ++.++..|.+...++.++++..+.-... . ++...+......+ ..+.-+ ..-.+..-.+.+++
T Consensus 447 le~~e~al~e~~~d~~Al~yvkr~k~~~~~~s~~~~~~~~~t~~~~~~~kl~~qg~~~vm~GVKN-Llp~~q~lPvT~iv 525 (621)
T KOG1301|consen 447 LEAVENALTEAGCDLNALKYVKRLKEITKMSSATSAYSGTTTKIVDLFEKLYSQGSSFVMEGVKN-LLPKKQNLPVTRIV 525 (621)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhhcccccccccCCcccHHHHHHHHhhccHHHHHhhHHh-cCcccccCcHHHHH
Confidence 4 4566777887777777777654421111 1 1111111000000 001111 11234555678899
Q ss_pred HHHHhCC--CCCCCCCCccCCCCCCCC
Q psy8630 361 EDAIEDK--LDQKHFPFLAGHVTSSGY 385 (390)
Q Consensus 361 ~~~~~~~--L~~~~yP~v~~~~~~~~~ 385 (390)
+.+..++ ....+|-|+++..+.+|.
T Consensus 526 eal~~~~sn~etddYl~~DPk~~k~~~ 552 (621)
T KOG1301|consen 526 EALMDPKSNPETDDYLYFDPKLSKGGS 552 (621)
T ss_pred HHhhCCCCCccccceEeeccccccCCC
Confidence 9998765 455569999999888873
No 6
>KOG1302|consensus
Probab=100.00 E-value=1.2e-49 Score=396.74 Aligned_cols=359 Identities=19% Similarity=0.329 Sum_probs=282.3
Q ss_pred CchhhhcCccEEecccCCCCCC-CCCceEEEecCCHHHHHHHHHHhccccc-CCcceEEEeccchh-----hHHhhh---
Q psy8630 1 MHEISAEGMTIVEDIHKAREPL-PSLEAVYLITPCEKSVKALMNDFNSSTR-TMYKAAHVYFTECF-----YYFSFL--- 70 (390)
Q Consensus 1 mseL~e~gV~lve~i~~~R~~~-~~~~aIyfi~Pt~~~i~~i~~d~~~~~~-~~y~~y~i~F~~~~-----~lle~l--- 70 (390)
+|.|.+|||.....++.++.|. ...+.|||+||+.+|++.|+++++..++ ..-+.||++|.|++ .++|+.
T Consensus 54 ~s~Lk~hgV~~~~~l~~~~~~~~~~~~~vy~~Rp~~~~~~~ia~~v~~~~~d~~~r~~~vi~~P~~~~~c~~~Lee~gv~ 133 (600)
T KOG1302|consen 54 ASLLKEHGVRRLLHLDAEKSPNSEVKQVVYFVRPRLENMQLIAEHVENVQRDGFTRDYHVIFVPRRSSLCETLLEEEGVY 133 (600)
T ss_pred HHHHHHhCcHHhhccCcccCcccccCeEEEEEcCchHHHHHHHHHHhhhhhchhcceeEEEEeccHHHHHHHHHHhcccc
Confidence 4789999998777787666333 3357999999999999999999986433 45789999999985 444433
Q ss_pred ------------Cc-----------c----h-HHHhHHHHHHHHHHHHHHHHHhCCCCeEEecCCCchHHHHHHHHHHHH
Q psy8630 71 ------------LV-----------S----I-LVLRMANMERIAEQIATLCATLGEYPSVRYRSDFDRNVELAQLVQQKL 122 (390)
Q Consensus 71 ------------~p-----------~----~-~~~~~~~~~~ia~~L~sl~~~lg~~P~Iry~~~~~~a~~~a~~l~~~l 122 (390)
.| . + .+++.+.+.++|+++.+++.++|.+|.|+..|. .|+++++++.+.-
T Consensus 134 ~~v~~~e~~~~~lpld~DllSlEl~~~~~d~~~~gd~s~l~~va~~l~~LQ~~~G~ip~v~g~G~--~ak~~~~l~~~l~ 211 (600)
T KOG1302|consen 134 GLVLVEEQILDLLPLDGDLLSLELPNSFLDLYLDGDQSSLYHVADALVSLQRLYGIIPKVYGKGE--CAKRVWELLKKLE 211 (600)
T ss_pred cccccchhhhhhccccccchhccchHHHHHHhhccccchhHHHHHHHHHHHHhhCCCcceeeccH--HHHHHHHHHHHHh
Confidence 11 1 1 145788999999999999999999999998774 5888887776544
Q ss_pred HHHhccCCCCCCCCCCCCceEEEecCCCCcchhhhhhhchHHHHhhhccCCchh--------------------------
Q psy8630 123 DAYKADEPTMGEGVEKARSQLLILDRGFDCVSPLLHELTLQAMAYDLLNIENDQ-------------------------- 176 (390)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~LiIlDR~~D~vTPLlh~~TYqali~dl~~i~~~~-------------------------- 176 (390)
++.... +.+ ...+++.||++||++|++||||||.||+|++||+|+|++|+
T Consensus 212 ~e~~t~--n~~--~~~~~~~liLlDR~~D~vtpLlTQltYeGLLDEiy~I~~g~vk~p~~~~~~~q~g~~~~~~~~~~~~ 287 (600)
T KOG1302|consen 212 REEATE--NNG--DRPEIDHLILLDRDVDPVTPLLTQLTYEGLLDEIYGISSGNVKLPSENFKRNQAGDLGKGKTEKKIV 287 (600)
T ss_pred hccccc--cCC--CccccceEEEEeccCcccchhhhHHHHHHHHHHHhhccCCeEecChHHccchhcCCCccCcccccee
Confidence 332111 111 12467899999999999999999999999999999999982
Q ss_pred -------HHHHHH--HH------HHhcCC-------CCCCccCHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8630 177 -------VTKNLK--KF------IDSKRM-------PQGDKQTMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKAYQG 234 (390)
Q Consensus 177 -------v~~~~~--~~------~~~~~~-------~~~~~~s~~e~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~ 234 (390)
|..+++ +| ..++++ .+.+.++++||++||++||.++++++.++.|+++|+.+++.++.
T Consensus 288 l~~~~deIy~eiR~k~f~~v~~~lsk~ak~l~~~~~~r~~~~sV~Eik~FV~~Lp~L~~~~~~l~~H~~lae~i~~~v~~ 367 (600)
T KOG1302|consen 288 LLYSSDEIYAEIRNKHFNAVGPLLSKKAKELQAQYETRRQAMSVAEIKDFVSKLPKLQQRKKSLERHTNLAEMIMQHVKN 367 (600)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 222222 12 112111 14468899999999999999999999999999999999999996
Q ss_pred -HHHHHHHHHHHHhcCCCcchhhhHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHhCCCCHHH----HHHHHHHcCCCch
Q psy8630 235 -YVDKLCRVEQDLATGEDAEGERIKDHMRNIVPILLDQNVSNYDKMRIIILYILNKNGISEDN----LNKLITHAQIQPP 309 (390)
Q Consensus 235 -~l~~~~~~Eq~i~~g~~~~g~~~~~~~~~i~~~l~~~~~~~~dkLRLl~L~~l~~~g~~~~~----~~~ll~~~g~~~~ 309 (390)
.|.+..++||+++.|.|.+. . +++|+++|. .+.+...+|||+||.|++.+|+++++ +++++|.||+ +
T Consensus 368 ~~f~~~l~lE~ell~~~d~~k----~-~~~IeElI~-~~~~~~~vLRLicL~Slt~~Gl~~k~l~~~rr~~lqsYG~--e 439 (600)
T KOG1302|consen 368 EDFRKLLKLEHELLEGNDSDK----D-FDYIEELIY-QEVPLNNVLRLICLLSLTCNGLKPKDLDHYRREYLQSYGY--E 439 (600)
T ss_pred HHHHHHHHHHHHHHhccCccc----c-hHHHHHHHh-hcccHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhH--H
Confidence 79999999999999998862 3 789999986 58999999999999999999999887 3678999998 8
Q ss_pred HHHHHHHHHHcCCcccccCCCC--------------CCCCCCC----cCCCCccccccccccchHHHHHHHHHhCCCCCC
Q psy8630 310 EKQAIVNLANLGLNSVIDGNRK--------------KLYQIPR----KERISECTYQMSRWTPIVKDIMEDAIEDKLDQK 371 (390)
Q Consensus 310 ~~~~l~~l~~lg~~~~~~~~~~--------------~~~~~~~----~~~~~~~~y~~s~y~P~l~~ii~~~~~~~L~~~ 371 (390)
|+-++.||+++|+...+.++++ +.++... ..+|.|++|+||||+|+++||++.+++...-..
T Consensus 440 hl~tl~nL~kaGLl~~q~~~~~~~~~~~~~~~st~~ntl~l~~~~~d~~~p~DiaYvySgy~PLs~rlve~~l~~~~w~~ 519 (600)
T KOG1302|consen 440 HLLTLQNLEKAGLLREQTGGRKLHTKSSKRNYSTWANTLPLVDEENDESNPSDIAYVYSGYAPLSCRLVEDLLKRRGWQE 519 (600)
T ss_pred HHHHHHHHHHcCCcccccCCCcchhhHHHHHHHHHHhcCCCcCCcccccCcccchhhhcccccHHHHHHHHHhcccchhh
Confidence 9999999999999987654331 1112221 236899999999999999999999998854444
Q ss_pred CC
Q psy8630 372 HF 373 (390)
Q Consensus 372 ~y 373 (390)
.|
T Consensus 520 ~~ 521 (600)
T KOG1302|consen 520 LY 521 (600)
T ss_pred hH
Confidence 45
No 7
>PF05846 Chordopox_A15: Chordopoxvirus A15 protein; InterPro: IPR008445 This family consists of several Chordopoxvirus A15 like sequences.
Probab=31.64 E-value=1.1e+02 Score=24.13 Aligned_cols=37 Identities=8% Similarity=0.168 Sum_probs=29.5
Q ss_pred CCceEEEecCCHHHHHHHHHHhcccccCCcceEEEeccc
Q psy8630 24 SLEAVYLITPCEKSVKALMNDFNSSTRTMYKAAHVYFTE 62 (390)
Q Consensus 24 ~~~aIyfi~Pt~~~i~~i~~d~~~~~~~~y~~y~i~F~~ 62 (390)
+.++||+|.||..-+-++|-.++.. .=-+..+|.|..
T Consensus 45 ~~ksilLVNPs~~~Llkicv~ikr~--kW~G~i~iLFe~ 81 (90)
T PF05846_consen 45 DFKSILLVNPSYIQLLKICVYIKRN--KWGGNIYILFER 81 (90)
T ss_pred ccceEEEECCCHHHHHHHHHHHhcC--CcCCeEEEEEec
Confidence 5789999999999999999888852 334678888853
No 8
>PHA02894 hypothetical protein; Provisional
Probab=23.48 E-value=1.2e+02 Score=23.62 Aligned_cols=45 Identities=9% Similarity=0.246 Sum_probs=31.4
Q ss_pred ccCCCCCCCCCceEEEecCCHHHHHHHHHHhcccccCCcceEEEecc
Q psy8630 15 IHKAREPLPSLEAVYLITPCEKSVKALMNDFNSSTRTMYKAAHVYFT 61 (390)
Q Consensus 15 i~~~R~~~~~~~aIyfi~Pt~~~i~~i~~d~~~~~~~~y~~y~i~F~ 61 (390)
|+.-.--+.+.+.||++.|+...+=++|-.+++. .=-+..+|.|.
T Consensus 52 id~~h~yf~s~ksVlLVNPs~~dLLKICVyIKR~--KW~G~I~LLFn 96 (97)
T PHA02894 52 IDDIHLYFKKFKNIYIVNPRNHDIIKIFHFIKKN--KWEGGFYLLFN 96 (97)
T ss_pred EeceeeeeecCceEEEECCcHHHHHHhheeeeec--ccCCcEEEEEe
Confidence 3333334556789999999999999998888742 22356777773
No 9
>PF06757 Ins_allergen_rp: Insect allergen related repeat, nitrile-specifier detoxification; InterPro: IPR010629 This entry represents several insect specific allergen repeats. These repeats are commonly found in various proteins from cockroaches, fruit flies and mosquitos. It has been suggested that the repeat sequences have evolved by duplication of an ancestral amino acid domain, which may have arisen from the mitochondrial energy transfer proteins []. This family exemplifies a case of novel gene evolution. The case in point is the arms-race between plants and their infective insective herbivores in the area of the glucosinolate-myrosinase system. Brassicas have developed the glucosinolate-myrosinase system as chemical defence mechanism against the insects, and consequently the insects have adapted to produce a detoxifying molecule, nitrile-specifier protein (NSP). NSP is present in the Pieris rapae (Cabbage white butterfly). NSP is structurally different from and has no amino acid homology to any known detoxifying enzymes, and it appears to have arisen by a process of domain and gene duplication of a sequence of unknown function that is widespread in insect species and referred to as insect-allergen-repeat protein. Thus this family is found either as a single domain or as a multiple repeat-domain [].
Probab=20.71 E-value=4.1e+02 Score=23.31 Aligned_cols=119 Identities=13% Similarity=0.200 Sum_probs=58.1
Q ss_pred CHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhhHHHHHHHHHHhhcCCCCch
Q psy8630 197 TMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKAYQGYVDKLCRVEQDLATGEDAEGERIKDHMRNIVPILLDQNVSNY 276 (390)
Q Consensus 197 s~~e~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~~l~~~~~~Eq~i~~g~~~~g~~~~~~~~~i~~~l~~~~~~~~ 276 (390)
...++..-+.++|+++....-+..|--=+....+.+..-+ .+..+.-.-.+.. ..|..+.-.++.+..++ +.
T Consensus 45 ~f~~l~~~l~~~pE~~~l~~yL~~~gldv~~~i~~i~~~l-~~~~~~p~~~~~~-~~~~g~~g~~~di~~~l------P~ 116 (179)
T PF06757_consen 45 EFKQLWQQLEALPEVKALLDYLESAGLDVYYYINQINDLL-GLPPLNPTPSLSC-SRGGGLNGFVDDILALL------PR 116 (179)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHCCCCHHHHHHHHHHHH-cCCcCCCCccccc-ccCCCHHHHHHHHHHHC------CH
Confidence 4677888888899998877766655433333333332111 1111100000000 02223444555555554 56
Q ss_pred hHHHHHHHHHHHhC--------CCCHHHHHHHHHHcCCCchHHHHHHHHHHcCCc
Q psy8630 277 DKMRIIILYILNKN--------GISEDNLNKLITHAQIQPPEKQAIVNLANLGLN 323 (390)
Q Consensus 277 dkLRLl~L~~l~~~--------g~~~~~~~~ll~~~g~~~~~~~~l~~l~~lg~~ 323 (390)
++++-+.-.-+..+ .+...+++++++..--+.+....++.|+..|+.
T Consensus 117 ~~l~aL~~~K~~~s~~F~~f~~~l~S~ef~~~~~~~~~~~~~~~~~~~L~~~Gvd 171 (179)
T PF06757_consen 117 DKLRALYEEKLATSPEFAEFVEALRSPEFQQLYNALWASPEFQRLLNELRENGVD 171 (179)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHcCHHHHHHHHHHHcCHHHHHHHHHHHHcCCC
Confidence 77776665555432 122233444544433334555666666666654
No 10
>cd01105 HTH_GlnR-like Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.
Probab=20.62 E-value=2.9e+02 Score=21.12 Aligned_cols=47 Identities=15% Similarity=0.178 Sum_probs=35.5
Q ss_pred CCCchhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCchHHHHHHHHHHcC
Q psy8630 272 NVSNYDKMRIIILYILNKNGISEDNLNKLITHAQIQPPEKQAIVNLANLG 321 (390)
Q Consensus 272 ~~~~~dkLRLl~L~~l~~~g~~~~~~~~ll~~~g~~~~~~~~l~~l~~lg 321 (390)
.++..|..+|..+..|...|++-+++.+++...+. ......+|...|
T Consensus 39 ~Ys~~dv~~l~~I~~Lr~~G~sl~~i~~~l~~~~~---~~~~~~~~~~~~ 85 (88)
T cd01105 39 KYSLADVDRLLVIKELLDEGFTLAAAVEKLRRRRV---QAEVRRRLMKDG 85 (88)
T ss_pred ecCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHccC---HHHHHHHHHHHh
Confidence 46788899999999999899999999999876543 344555665544
Done!